Query         030231
Match_columns 181
No_of_seqs    94 out of 96
Neff          4.4 
Searched_HMMs 29240
Date          Mon Mar 25 17:02:50 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030231.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030231hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3v53_A RNA-binding protein 25;  35.2      42  0.0014   25.5   4.0   70   48-134    37-107 (119)
  2 2cr7_A Paired amphipathic heli  35.1      76  0.0026   21.9   5.2   46   90-137    30-76  (80)
  3 1x5b_A Signal transducing adap  34.9 1.4E+02  0.0049   22.9   7.3   51   49-121    11-61  (163)
  4 1juq_A ADP-ribosylation factor  33.1 1.2E+02   0.004   23.6   6.5   46   62-121    14-59  (171)
  5 3ldz_A STAM-1, signal transduc  32.4 1.4E+02  0.0049   22.2   6.7   44   64-121     8-51  (140)
  6 2czy_A Paired amphipathic heli  30.8      80  0.0028   21.6   4.6   46   90-137    24-70  (77)
  7 1e91_A Paired amphipathic heli  26.3      92  0.0032   21.7   4.4   46   90-137    27-83  (85)
  8 1mhq_A ADP-ribosylation factor  26.1 2.1E+02  0.0073   21.6   7.6   46   62-121     2-47  (148)
  9 4f55_A Spore cortex-lytic enzy  24.7 1.9E+02  0.0064   21.8   6.1   55   60-145    17-71  (128)
 10 3zyq_A Hepatocyte growth facto  24.2 1.6E+02  0.0054   23.6   6.0   28   65-104    12-39  (226)
 11 3rru_A TOM1L1 protein; structu  23.7 1.9E+02  0.0064   22.1   6.1   48   61-122    16-63  (152)
 12 1dvp_A HRS, hepatocyte growth   23.7 2.4E+02  0.0082   22.2   6.9   31   62-104     6-36  (220)
 13 1elk_A Target of MYB1; superhe  22.7 2.5E+02  0.0086   21.2   7.7   47   62-122    17-63  (157)
 14 2ysk_A Hypothetical protein TT  21.2 1.5E+02   0.005   22.4   5.0   46   90-135    85-135 (145)

No 1  
>3v53_A RNA-binding protein 25; PWI, RNA-binding domain; 2.90A {Homo sapiens}
Probab=35.15  E-value=42  Score=25.50  Aligned_cols=70  Identities=16%  Similarity=0.114  Sum_probs=53.7

Q ss_pred             cccCchHHHHHHHHHHHHHHHHcCCCCCcchhhccccccCCCChhHHHHHHHHHH-ccCCHHHHHHHHHHHHHhcCCCCh
Q 030231           48 KYNDGFFEKAFMTLFARKMEKFASPAKSKTETKKKRWFDFGYDYESFVDVSKRVM-EGRSRQQQQEVVREVLLSMLPPGA  126 (181)
Q Consensus        48 ~Y~Ds~lDk~~i~lF~rkm~~~~G~~~~~~~~~~~~~~~~~~gYdglVe~a~~lm-~grs~~~q~~~v~rVL~sl~Pp~~  126 (181)
                      .|+++.+|+.+=-+..+|+.+.+|..-                 +.|||..-... ...+|.+-++-+..+|..=-..++
T Consensus        37 ~vd~~~i~~~lkPWI~kKI~E~LG~eE-----------------d~LVdfI~~~L~~~~~pk~l~~~L~~~LDeeA~~FV   99 (119)
T 3v53_A           37 IVDSILMERRIRPWINKKIIEYIGEEE-----------------ATLVDFVCSKVMAHSSPQSILDDVAMVLDEEAEVFI   99 (119)
T ss_dssp             TSCHHHHHHTHHHHHHHHHHHHTC--------------------CHHHHHHHHHHHTTCCHHHHHHHHHHHHTTHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHhCCch-----------------HHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhHHHHH
Confidence            456778888888999999999999632                 34777776665 577899988888899988777777


Q ss_pred             HHHHHHhc
Q 030231          127 PAQFRKLF  134 (181)
Q Consensus       127 p~~fr~lf  134 (181)
                      -.++|.|+
T Consensus       100 ~kLWrlLI  107 (119)
T 3v53_A          100 VKMWRLLI  107 (119)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            77777765


No 2  
>2cr7_A Paired amphipathic helix protein SIN3B; paired amphipathic helix repeat, transcriptional repressor, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rmr_A 2rms_A
Probab=35.13  E-value=76  Score=21.93  Aligned_cols=46  Identities=15%  Similarity=0.316  Sum_probs=34.3

Q ss_pred             ChhHHHHHHHHHHc-cCCHHHHHHHHHHHHHhcCCCChHHHHHHhcCCc
Q 030231           90 DYESFVDVSKRVME-GRSRQQQQEVVREVLLSMLPPGAPAQFRKLFPPT  137 (181)
Q Consensus        90 gYdglVe~a~~lm~-grs~~~q~~~v~rVL~sl~Pp~~p~~fr~lf~P~  137 (181)
                      -|+.|+++-+.... ..+..+-.+.|...|..-  |-+..-|..++|++
T Consensus        30 ~Y~~FL~im~~fk~~~~~~~~v~~rV~~Lf~~h--pdLi~gFn~FLP~~   76 (80)
T 2cr7_A           30 TYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEH--PDLIVGFNAFLPSG   76 (80)
T ss_dssp             HHHHHHHHHHHHHTTSSCHHHHHHHHHHHGGGC--HHHHHHHHHHSSCS
T ss_pred             HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHcCC--HHHHHHHHHHCcCC
Confidence            49999999999975 567777777776666654  45677788888875


No 3  
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=34.90  E-value=1.4e+02  Score=22.86  Aligned_cols=51  Identities=14%  Similarity=0.336  Sum_probs=32.6

Q ss_pred             ccCchHHHHHHHHHHHHHHHHcCCCCCcchhhccccccCCCChhHHHHHHHHHHccCCHHHHHHHHHHHHHhc
Q 030231           49 YNDGFFEKAFMTLFARKMEKFASPAKSKTETKKKRWFDFGYDYESFVDVSKRVMEGRSRQQQQEVVREVLLSM  121 (181)
Q Consensus        49 Y~Ds~lDk~~i~lF~rkm~~~~G~~~~~~~~~~~~~~~~~~gYdglVe~a~~lm~grs~~~q~~~v~rVL~sl  121 (181)
                      ..++++|        ..+++++......            +|++.++|+|..|....  ...+++++-+...|
T Consensus        11 ~~~~p~~--------~~IekATs~~~~~------------~Dw~~~leicD~I~~~~--~~~keA~ral~krl   61 (163)
T 1x5b_A           11 FTANPFE--------QDVEKATNEYNTT------------EDWSLIMDICDKVGSTP--NGAKDCLKAIMKRV   61 (163)
T ss_dssp             CCCCTTH--------HHHHHHTCTTCSS------------CCHHHHHHHHHHHHHSS--SHHHHHHHHHHHHH
T ss_pred             cCCChHH--------HHHHHHcCCCCCC------------cCHHHHHHHHHHHhCCC--ccHHHHHHHHHHHH
Confidence            4456777        5667787755433            78999999999997643  33444554443333


No 4  
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=33.09  E-value=1.2e+02  Score=23.63  Aligned_cols=46  Identities=15%  Similarity=0.250  Sum_probs=30.1

Q ss_pred             HHHHHHHHcCCCCCcchhhccccccCCCChhHHHHHHHHHHccCCHHHHHHHHHHHHHhc
Q 030231           62 FARKMEKFASPAKSKTETKKKRWFDFGYDYESFVDVSKRVMEGRSRQQQQEVVREVLLSM  121 (181)
Q Consensus        62 F~rkm~~~~G~~~~~~~~~~~~~~~~~~gYdglVe~a~~lm~grs~~~q~~~v~rVL~sl  121 (181)
                      |-..+++++......            ++++.++|+|..|....+  ..+++++-+...|
T Consensus        14 ~~~~IekATs~~l~~------------~Dw~~ileicD~I~~~~~--~~k~A~ral~krl   59 (171)
T 1juq_A           14 LESWLNKATNPSNRQ------------EDWEYIIGFCDQINKELE--GPQIAVRLLAHKI   59 (171)
T ss_dssp             HHHHHHHHTCTTCSS------------CCHHHHHHHHHHHHHSTT--HHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCC------------cCHHHHHHHHHHHHcCCc--cHHHHHHHHHHHh
Confidence            446677888765433            789999999999986532  3445554444444


No 5  
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=32.38  E-value=1.4e+02  Score=22.20  Aligned_cols=44  Identities=18%  Similarity=0.382  Sum_probs=28.5

Q ss_pred             HHHHHHcCCCCCcchhhccccccCCCChhHHHHHHHHHHccCCHHHHHHHHHHHHHhc
Q 030231           64 RKMEKFASPAKSKTETKKKRWFDFGYDYESFVDVSKRVMEGRSRQQQQEVVREVLLSM  121 (181)
Q Consensus        64 rkm~~~~G~~~~~~~~~~~~~~~~~~gYdglVe~a~~lm~grs~~~q~~~v~rVL~sl  121 (181)
                      ..+++++......            +|++.++|+|..+....  ...+++++-+-..|
T Consensus         8 ~~iekAT~~~l~~------------~dw~~ileicD~I~~~~--~~~k~a~rai~Krl   51 (140)
T 3ldz_A            8 QDVEKATSEMNTA------------EDWGLILDICDKVGQSR--TGPKDCLRSIMRRV   51 (140)
T ss_dssp             HHHHHHTCTTSSS------------CCHHHHHHHHHHHTTST--THHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCC------------cCHHHHHHHHHHHHCCC--cCHHHHHHHHHHHH
Confidence            4567787765443            79999999999998643  34445554443333


No 6  
>2czy_A Paired amphipathic helix protein SIN3B; SIN3, PAH1, transcriptional repressor, gene regulation; NMR {Mus musculus}
Probab=30.76  E-value=80  Score=21.60  Aligned_cols=46  Identities=15%  Similarity=0.296  Sum_probs=32.2

Q ss_pred             ChhHHHHHHHHHHc-cCCHHHHHHHHHHHHHhcCCCChHHHHHHhcCCc
Q 030231           90 DYESFVDVSKRVME-GRSRQQQQEVVREVLLSMLPPGAPAQFRKLFPPT  137 (181)
Q Consensus        90 gYdglVe~a~~lm~-grs~~~q~~~v~rVL~sl~Pp~~p~~fr~lf~P~  137 (181)
                      -|+.|+++-+.... ..+..+-.+.|...+..-  |-+..-|..++|++
T Consensus        24 ~Y~~FL~im~~~k~~~~~~~~v~~rv~~Lf~~h--pdLi~gFn~FLP~~   70 (77)
T 2czy_A           24 TYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEH--PDLIVGFNAFLPLG   70 (77)
T ss_dssp             HHHHHHHHHHHHHTTCSCHHHHHHHHHHHTTTC--HHHHHHHHTTSCSS
T ss_pred             HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHcCC--HHHHHHHHHHCCCC
Confidence            49999999999975 456666666665555543  44667778888775


No 7  
>1e91_A Paired amphipathic helix protein SIN3B; eukaryotic transcriptional regulation, SIN3, PAH domains, protein-protein interactions; NMR {Mus musculus} SCOP: a.59.1.1 PDB: 1pd7_A
Probab=26.27  E-value=92  Score=21.73  Aligned_cols=46  Identities=15%  Similarity=0.283  Sum_probs=29.8

Q ss_pred             ChhHHHHHHHHHHcc-----------CCHHHHHHHHHHHHHhcCCCChHHHHHHhcCCc
Q 030231           90 DYESFVDVSKRVMEG-----------RSRQQQQEVVREVLLSMLPPGAPAQFRKLFPPT  137 (181)
Q Consensus        90 gYdglVe~a~~lm~g-----------rs~~~q~~~v~rVL~sl~Pp~~p~~fr~lf~P~  137 (181)
                      -|..|+++-+....+           .|..+-.+.|...|..-  |-+..-|..++|++
T Consensus        27 ~Y~~FL~il~~yk~~~~d~~~~~~~~~s~~eV~~~V~~Lf~~h--pDLl~~F~~FLP~~   83 (85)
T 1e91_A           27 IYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFRGQ--EDLLSEFGQFLPEA   83 (85)
T ss_dssp             HHHHHHHHHHHHHHTTCSSSCCCSSCCCHHHHHHHHHHHTSSC--HHHHHHHHHHSCCC
T ss_pred             HHHHHHHHHHHHHHccccccccccccCcHHHHHHHHHHHHccC--HHHHHHHHHHCcCc
Confidence            499999999988754           35555555555444443  44556677777764


No 8  
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=26.05  E-value=2.1e+02  Score=21.55  Aligned_cols=46  Identities=11%  Similarity=0.155  Sum_probs=29.6

Q ss_pred             HHHHHHHHcCCCCCcchhhccccccCCCChhHHHHHHHHHHccCCHHHHHHHHHHHHHhc
Q 030231           62 FARKMEKFASPAKSKTETKKKRWFDFGYDYESFVDVSKRVMEGRSRQQQQEVVREVLLSM  121 (181)
Q Consensus        62 F~rkm~~~~G~~~~~~~~~~~~~~~~~~gYdglVe~a~~lm~grs~~~q~~~v~rVL~sl  121 (181)
                      |-..+++++......            ++++.++|+|..|....  ...+++++-+-..|
T Consensus         2 ~~~~iekATs~~l~~------------~dw~~~leicD~I~~~~--~~~k~a~rai~krl   47 (148)
T 1mhq_A            2 LELWLNKATDPSMSE------------QDWSAIQNFCEQVNTDP--NGPTHAPWLLAHKI   47 (148)
T ss_dssp             HHHHHHHHHCTTCSS------------CCHHHHHHHHHHHHHSS--HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCC------------cCHHHHHHHHHHHHcCC--ccHHHHHHHHHHHh
Confidence            345667777655433            78999999999998643  44555554444444


No 9  
>4f55_A Spore cortex-lytic enzyme; hydrolase, lytic transglycosylase; 1.85A {Bacillus cereus}
Probab=24.67  E-value=1.9e+02  Score=21.83  Aligned_cols=55  Identities=16%  Similarity=0.185  Sum_probs=34.6

Q ss_pred             HHHHHHHHHHcCCCCCcchhhccccccCCCChhHHHHHHHHHHccCCHHHHHHHHHHHHHhcCCCChHHHHHHhcCCchh
Q 030231           60 TLFARKMEKFASPAKSKTETKKKRWFDFGYDYESFVDVSKRVMEGRSRQQQQEVVREVLLSMLPPGAPAQFRKLFPPTKW  139 (181)
Q Consensus        60 ~lF~rkm~~~~G~~~~~~~~~~~~~~~~~~gYdglVe~a~~lm~grs~~~q~~~v~rVL~sl~Pp~~p~~fr~lf~P~~~  139 (181)
                      .++++.|.-|++.                .+|+|.+.++.-+|            -||-..-||.-+...+..   |++|
T Consensus        17 ~lLA~~i~~EA~g----------------e~~~G~~aVa~Vil------------NRv~~~~fp~ti~~Vv~q---~~QF   65 (128)
T 4f55_A           17 QLMANAVYGESRG----------------EPYLGQVAVAAVIL------------NRVTSASFPNTVSGVIFE---PRAF   65 (128)
T ss_dssp             HHHHHHHHHHHTT----------------SCHHHHHHHHHHHH------------HHHHSTTSCSSHHHHHHS---TTSC
T ss_pred             HHHHHHHHHHHCC----------------CCHHHHHHHHHHHH------------HhhcCCCCCcCHHHHccc---CCCc
Confidence            4566777777763                57999999998875            233334566655554433   6666


Q ss_pred             hHHHHh
Q 030231          140 AAEFNA  145 (181)
Q Consensus       140 sae~nA  145 (181)
                      ++-.+.
T Consensus        66 s~v~~G   71 (128)
T 4f55_A           66 TAVADG   71 (128)
T ss_dssp             HHHHHT
T ss_pred             eEEeCC
Confidence            665554


No 10 
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=24.19  E-value=1.6e+02  Score=23.65  Aligned_cols=28  Identities=21%  Similarity=0.362  Sum_probs=21.6

Q ss_pred             HHHHHcCCCCCcchhhccccccCCCChhHHHHHHHHHHcc
Q 030231           65 KMEKFASPAKSKTETKKKRWFDFGYDYESFVDVSKRVMEG  104 (181)
Q Consensus        65 km~~~~G~~~~~~~~~~~~~~~~~~gYdglVe~a~~lm~g  104 (181)
                      .+++++......            +|++.++|++..|...
T Consensus        12 ~i~kAT~~~~~~------------~dw~~ileicD~I~~~   39 (226)
T 3zyq_A           12 LLDKATSQLLLE------------TDWESILQICDLIRQG   39 (226)
T ss_dssp             HHHHHTCTTCSS------------CCHHHHHHHHHHHHTT
T ss_pred             HHHHHcCCCCCC------------cCHHHHHHHHHHHhCC
Confidence            567777765443            7899999999999864


No 11 
>3rru_A TOM1L1 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, super-helical protein; 3.00A {Homo sapiens}
Probab=23.66  E-value=1.9e+02  Score=22.14  Aligned_cols=48  Identities=10%  Similarity=0.183  Sum_probs=32.8

Q ss_pred             HHHHHHHHHcCCCCCcchhhccccccCCCChhHHHHHHHHHHccCCHHHHHHHHHHHHHhcC
Q 030231           61 LFARKMEKFASPAKSKTETKKKRWFDFGYDYESFVDVSKRVMEGRSRQQQQEVVREVLLSML  122 (181)
Q Consensus        61 lF~rkm~~~~G~~~~~~~~~~~~~~~~~~gYdglVe~a~~lm~grs~~~q~~~v~rVL~sl~  122 (181)
                      -|...+++++......            ++++.++|+|..|....  ..-+++++-+...|.
T Consensus        16 ~~~~~IekATs~~l~~------------~Dw~~ileicD~In~~~--~~pkeA~ral~KRl~   63 (152)
T 3rru_A           16 SVGHLIEKATFAGVQT------------EDWGQFMHICDIINTTQ--DGPKDAVKALKKRIS   63 (152)
T ss_dssp             HHHHHHHHHTCSSCCS------------CCHHHHHHHHHHHHHST--THHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHcCCCCCC------------ccHHHHHHHHHHHhCCC--ccHHHHHHHHHHHHc
Confidence            3445667888765543            79999999999998643  345556665555554


No 12 
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=23.65  E-value=2.4e+02  Score=22.22  Aligned_cols=31  Identities=16%  Similarity=0.324  Sum_probs=22.6

Q ss_pred             HHHHHHHHcCCCCCcchhhccccccCCCChhHHHHHHHHHHcc
Q 030231           62 FARKMEKFASPAKSKTETKKKRWFDFGYDYESFVDVSKRVMEG  104 (181)
Q Consensus        62 F~rkm~~~~G~~~~~~~~~~~~~~~~~~gYdglVe~a~~lm~g  104 (181)
                      |-..+++++......            +|++.++|++..|..+
T Consensus         6 ~~~~ie~AT~~~~~~------------~dw~~~leicd~i~~~   36 (220)
T 1dvp_A            6 FCKNLENATSHLRLE------------PDWPSILLICDEINQK   36 (220)
T ss_dssp             HHHHHHHHHCTTCSS------------CCHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHcCCCCCC------------cCHHHHHHHHHhhcCC
Confidence            556677887765433            7899999999988753


No 13 
>1elk_A Target of MYB1; superhelix of helices, endocytosis/exocytosis complex; 1.50A {Homo sapiens} SCOP: a.118.9.2
Probab=22.70  E-value=2.5e+02  Score=21.21  Aligned_cols=47  Identities=13%  Similarity=0.253  Sum_probs=32.4

Q ss_pred             HHHHHHHHcCCCCCcchhhccccccCCCChhHHHHHHHHHHccCCHHHHHHHHHHHHHhcC
Q 030231           62 FARKMEKFASPAKSKTETKKKRWFDFGYDYESFVDVSKRVMEGRSRQQQQEVVREVLLSML  122 (181)
Q Consensus        62 F~rkm~~~~G~~~~~~~~~~~~~~~~~~gYdglVe~a~~lm~grs~~~q~~~v~rVL~sl~  122 (181)
                      +-..+++++......            +|++.++|+|..|....  ...+++++-+...|-
T Consensus        17 ~~~~IekATs~~l~~------------~Dw~~~leicD~I~~~~--~~~k~a~ral~krl~   63 (157)
T 1elk_A           17 VGQRIEKATDGSLQS------------EDWALNMEICDIINETE--EGPKDALRAVKKRIV   63 (157)
T ss_dssp             HHHHHHHHTCTTCSS------------CCHHHHHHHHHHHHHSS--SHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHcCCCCCC------------cCHHHHHHHHHHHhCCC--ccHHHHHHHHHHHhc
Confidence            345677888765433            78999999999998643  355666666666664


No 14 
>2ysk_A Hypothetical protein TTHA1432; conserved hypothetical, NPPSFA, national project on protein structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=21.17  E-value=1.5e+02  Score=22.39  Aligned_cols=46  Identities=17%  Similarity=0.245  Sum_probs=34.4

Q ss_pred             ChhHHHHHHHHHHc-----cCCHHHHHHHHHHHHHhcCCCChHHHHHHhcC
Q 030231           90 DYESFVDVSKRVME-----GRSRQQQQEVVREVLLSMLPPGAPAQFRKLFP  135 (181)
Q Consensus        90 gYdglVe~a~~lm~-----grs~~~q~~~v~rVL~sl~Pp~~p~~fr~lf~  135 (181)
                      +++.|++....-..     ..+++.--.+|..+|+..+++....-++..+|
T Consensus        85 ~~~eFl~rV~~~~~~~~~~~~~a~~~v~aV~~~L~~~v~~ge~~~v~~~LP  135 (145)
T 2ysk_A           85 HKEAFLAHVAEELKTPSGPAVDPEAATRAVFKVLSREISQGELEDVLGLLP  135 (145)
T ss_dssp             SHHHHHHHHHHTSEETTEESSCHHHHHHHHHHHHHHHSCHHHHHHHHHTSC
T ss_pred             CHHHHHHHHHHHcCcCCCCcccHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
Confidence            78899887776654     36788888899999999999765555555444


Done!