Query 030235
Match_columns 181
No_of_seqs 54 out of 56
Neff 2.6
Searched_HMMs 29240
Date Mon Mar 25 17:09:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030235.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030235hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a4j_A Pacszia, cation-transpo 99.0 8.6E-10 2.9E-14 69.9 5.3 64 100-169 4-69 (69)
2 3dxs_X Copper-transporting ATP 98.9 1.1E-09 3.8E-14 70.5 5.1 65 100-170 4-71 (74)
3 3iwl_A Copper transport protei 98.8 4.4E-09 1.5E-13 67.9 5.2 62 100-169 4-65 (68)
4 1cpz_A Protein (COPZ); copper 98.8 1.7E-08 5.7E-13 61.6 5.8 61 101-167 3-66 (68)
5 2roe_A Heavy metal binding pro 98.8 6E-09 2.1E-13 65.0 3.8 63 101-169 3-65 (66)
6 2ldi_A Zinc-transporting ATPas 98.8 2.3E-08 7.7E-13 60.8 6.2 63 100-168 5-70 (71)
7 1osd_A MERP, hypothetical prot 98.7 2.7E-08 9.2E-13 61.6 6.1 62 100-167 5-69 (72)
8 2xmm_A SSR2857 protein, ATX1; 98.7 9.5E-09 3.3E-13 62.1 3.8 62 100-167 3-64 (64)
9 2l3m_A Copper-ION-binding prot 98.7 1.8E-08 6.2E-13 62.4 5.1 63 99-167 6-71 (71)
10 3fry_A Probable copper-exporti 98.7 2.8E-08 9.6E-13 64.7 6.1 64 99-170 6-69 (73)
11 1yg0_A COP associated protein; 98.7 2.1E-08 7E-13 60.9 5.0 61 100-166 3-65 (66)
12 2xmw_A PACS-N, cation-transpor 98.7 2.2E-08 7.6E-13 61.6 5.1 64 100-169 5-70 (71)
13 1cc8_A Protein (metallochapero 98.7 3.8E-08 1.3E-12 63.5 6.0 63 100-169 7-70 (73)
14 1kvi_A Copper-transporting ATP 98.7 5E-08 1.7E-12 62.2 6.2 65 99-169 9-76 (79)
15 3cjk_B Copper-transporting ATP 98.7 4.2E-08 1.4E-12 61.8 5.6 64 99-168 3-69 (75)
16 2qif_A Copper chaperone COPZ; 98.6 4E-08 1.4E-12 58.9 4.8 62 100-167 4-68 (69)
17 2kt2_A Mercuric reductase; nme 98.6 4.3E-08 1.5E-12 60.6 4.9 61 101-167 3-65 (69)
18 1mwy_A ZNTA; open-faced beta-s 98.6 9.1E-08 3.1E-12 60.4 6.4 64 99-168 4-68 (73)
19 1yjr_A Copper-transporting ATP 98.6 3.9E-08 1.3E-12 61.3 4.6 65 100-170 6-73 (75)
20 1aw0_A Menkes copper-transport 98.6 2.7E-08 9.4E-13 61.5 3.8 63 100-168 5-70 (72)
21 1opz_A Potential copper-transp 98.6 1E-07 3.4E-12 59.1 6.4 64 99-168 7-73 (76)
22 1q8l_A Copper-transporting ATP 98.6 8.8E-08 3E-12 63.0 6.4 64 98-167 9-75 (84)
23 2k2p_A Uncharacterized protein 98.6 4.5E-08 1.5E-12 67.0 4.0 62 99-166 23-84 (85)
24 2ofg_X Zinc-transporting ATPas 98.5 2.2E-07 7.7E-12 65.7 7.1 70 99-174 9-81 (111)
25 1y3j_A Copper-transporting ATP 98.5 6.7E-08 2.3E-12 61.6 3.7 64 99-168 4-70 (77)
26 1fvq_A Copper-transporting ATP 98.5 7.4E-08 2.5E-12 59.5 3.6 65 99-169 3-69 (72)
27 2crl_A Copper chaperone for su 98.5 2.2E-07 7.5E-12 65.2 6.5 72 90-168 11-82 (98)
28 1p6t_A Potential copper-transp 98.5 1.8E-07 6E-12 66.5 5.8 66 99-170 75-143 (151)
29 2g9o_A Copper-transporting ATP 98.5 1.6E-07 5.4E-12 63.7 5.1 65 100-170 5-75 (90)
30 2ew9_A Copper-transporting ATP 98.4 1.8E-07 6.2E-12 65.8 4.3 63 99-167 81-146 (149)
31 2kyz_A Heavy metal binding pro 98.4 3.1E-07 1.1E-11 57.4 4.2 62 100-169 3-64 (67)
32 1jww_A Potential copper-transp 98.3 3.1E-07 1.1E-11 58.0 3.3 64 100-169 5-71 (80)
33 2kkh_A Putative heavy metal tr 98.3 1.1E-06 3.9E-11 59.2 5.9 64 99-168 17-83 (95)
34 2rop_A Copper-transporting ATP 98.2 1.6E-06 5.6E-11 65.8 5.7 65 98-168 122-189 (202)
35 2ew9_A Copper-transporting ATP 98.1 4.1E-06 1.4E-10 58.9 5.4 63 99-167 5-70 (149)
36 1qup_A Superoxide dismutase 1 98.1 8.8E-06 3E-10 66.2 7.2 64 98-168 6-69 (222)
37 1jk9_B CCS, copper chaperone f 98.0 1E-05 3.6E-10 67.2 7.3 66 97-169 6-71 (249)
38 2aj0_A Probable cadmium-transp 97.9 1.2E-05 4E-10 50.5 3.7 59 100-168 5-63 (71)
39 1p6t_A Potential copper-transp 97.7 5.8E-05 2E-09 53.4 5.7 61 100-166 8-71 (151)
40 2rop_A Copper-transporting ATP 97.7 5.6E-05 1.9E-09 57.3 5.3 62 99-166 21-88 (202)
41 3j09_A COPA, copper-exporting 97.3 0.00014 4.9E-09 67.1 4.0 63 100-168 4-69 (723)
42 3bpd_A Uncharacterized protein 71.5 6.3 0.00021 30.0 4.9 55 109-169 17-79 (100)
43 2x3d_A SSO6206; unknown functi 71.4 6.2 0.00021 29.8 4.8 56 108-169 15-78 (96)
44 2rrl_A FLIK, flagellar HOOK-le 69.6 5.3 0.00018 32.2 4.4 52 125-176 99-155 (169)
45 2raq_A Conserved protein MTH88 66.5 14 0.00048 27.9 5.8 55 109-169 17-79 (97)
46 1uwd_A Hypothetical protein TM 66.1 4 0.00014 28.7 2.7 25 110-134 59-83 (103)
47 3cq1_A Putative uncharacterize 65.0 4.5 0.00015 28.6 2.8 28 108-135 56-83 (103)
48 4f3q_A Transcriptional regulat 62.8 6.8 0.00023 33.1 3.9 48 117-173 156-204 (247)
49 2hiy_A Hypothetical protein; C 57.1 6.4 0.00022 31.1 2.7 59 113-175 24-84 (183)
50 3lno_A Putative uncharacterize 56.1 6.6 0.00023 28.1 2.4 22 113-134 64-86 (108)
51 1mw7_A Hypothetical protein HP 48.9 21 0.00073 29.9 4.7 45 119-173 158-203 (240)
52 1kon_A Protein YEBC, YEBC; alp 47.1 15 0.00053 31.0 3.6 47 118-173 156-203 (249)
53 2f06_A Conserved hypothetical 44.6 73 0.0025 22.6 6.4 53 108-167 81-136 (144)
54 3cq1_A Putative uncharacterize 42.7 50 0.0017 23.0 5.2 49 124-174 31-84 (103)
55 1lfp_A Hypothetical protein AQ 42.0 23 0.0008 29.9 3.9 46 118-173 155-201 (249)
56 1uwd_A Hypothetical protein TM 34.5 60 0.002 22.6 4.5 48 125-174 32-85 (103)
57 2jsx_A Protein NAPD; TAT, proo 33.0 84 0.0029 22.5 5.2 30 110-140 16-46 (95)
58 1gh8_A Translation elongation 29.4 73 0.0025 22.9 4.3 43 90-134 42-85 (89)
59 2yy3_A Elongation factor 1-bet 27.8 80 0.0027 22.8 4.3 42 90-133 44-87 (91)
60 2fi0_A Conserved domain protei 22.7 45 0.0015 22.7 2.1 16 152-167 63-78 (81)
61 1vgj_A Hypothetical protein PH 22.4 1.4E+02 0.0047 21.5 4.8 73 94-168 35-120 (184)
62 1b64_A Elongation factor 1-bet 20.1 1.6E+02 0.0054 21.2 4.6 41 90-132 44-86 (91)
No 1
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=98.96 E-value=8.6e-10 Score=69.87 Aligned_cols=64 Identities=19% Similarity=0.333 Sum_probs=57.0
Q ss_pred EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE--eeeccccccchHHHHHHHHHhCCccceee
Q 030235 100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV--EKQTTVQATGVAANLVEIIQGSGFKLQTL 169 (181)
Q Consensus 100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV--~kqttvqatgvassLvEAIe~aGFevqtl 169 (181)
+-|+-+|-.-.+|+.+|+++|+.++||.+++|++..+.++| +..++ .+.|.++|+++||++.-|
T Consensus 4 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~------~~~i~~~i~~~Gy~~~~~ 69 (69)
T 4a4j_A 4 INLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETT------PQILTDAVERAGYHARVL 69 (69)
T ss_dssp EEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCC------HHHHHHHHHHTTCEEEEC
T ss_pred EEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCC------HHHHHHHHHHcCCceEeC
Confidence 46788898899999999999999999999999999999999 35666 489999999999998643
No 2
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=98.94 E-value=1.1e-09 Score=70.45 Aligned_cols=65 Identities=20% Similarity=0.313 Sum_probs=57.5
Q ss_pred EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCccceeec
Q 030235 100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQTLN 170 (181)
Q Consensus 100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqtl~ 170 (181)
.-|+-+|-.-.+|+.+|+++|+.++||.+++|++..+.++| +..++ .+.|+++|+++||++..++
T Consensus 4 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 4 IQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVK------EEDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCC------HHHHHHHHHHHTCEEEEEE
T ss_pred EEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHCCCceEEcc
Confidence 45788898899999999999999999999999999999999 33456 4899999999999997664
No 3
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=98.83 E-value=4.4e-09 Score=67.94 Aligned_cols=62 Identities=15% Similarity=0.248 Sum_probs=55.0
Q ss_pred EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccceee
Q 030235 100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTL 169 (181)
Q Consensus 100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqtl 169 (181)
..|+- |-.-.+|+.+|+++|+.++|| +++|++..+.++|...++ .+.|.++|+++||++.-+
T Consensus 4 ~~~~v-gm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~------~~~i~~~i~~~Gy~~~~~ 65 (68)
T 3iwl_A 4 HEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHS------MDTLLATLKKTGKTVSYL 65 (68)
T ss_dssp EEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSC------HHHHHHHHHTTCSCEEEE
T ss_pred EEEEE-CcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCC------HHHHHHHHHHcCCceEec
Confidence 45777 878899999999999999999 999999999999955666 489999999999998654
No 4
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=98.76 E-value=1.7e-08 Score=61.64 Aligned_cols=61 Identities=20% Similarity=0.345 Sum_probs=53.5
Q ss_pred EEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-e--eeccccccchHHHHHHHHHhCCccce
Q 030235 101 YFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-E--KQTTVQATGVAANLVEIIQGSGFKLQ 167 (181)
Q Consensus 101 ~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~--kqttvqatgvassLvEAIe~aGFevq 167 (181)
.|+-+|-.-.+|...|+++|+.++||.+++|++..+.++| . ..++ .+.|.++|+++||++.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~G~~~~ 66 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQ------ATEICQAINELGYQAE 66 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCC------HHHHHHHHHTTSSCEE
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHcCCCcc
Confidence 4677888899999999999999999999999999999999 2 2345 4789999999999875
No 5
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=98.76 E-value=6e-09 Score=64.96 Aligned_cols=63 Identities=27% Similarity=0.456 Sum_probs=54.9
Q ss_pred EEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccceee
Q 030235 101 YFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTL 169 (181)
Q Consensus 101 ~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqtl 169 (181)
.|+-+|-.-.+|+.+|+++|..++||.+++|++..+.++|...++ .+.|.++|+++||++..+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~------~~~i~~~i~~~Gy~~~~~ 65 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTAD------PKALVQAVEEEGYKAEVL 65 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCC------HHHHHHHHHTTTCEEEEC
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCC------HHHHHHHHHHcCCCcEec
Confidence 467788888999999999999999999999999999999943445 488999999999998654
No 6
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=98.75 E-value=2.3e-08 Score=60.81 Aligned_cols=63 Identities=25% Similarity=0.370 Sum_probs=54.6
Q ss_pred EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCcccee
Q 030235 100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQT 168 (181)
Q Consensus 100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqt 168 (181)
+-|+-+|-.-.+|+.+|+++|..++||.+++|++..+.++| +..++. +.|.++|+++||++..
T Consensus 5 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~------~~i~~~i~~~G~~~~~ 70 (71)
T 2ldi_A 5 QQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSE------ITIQERIAALGYTLAE 70 (71)
T ss_dssp EEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCT------HHHHHHHHTTTCEEEC
T ss_pred EEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCH------HHHHHHHHHcCCCccC
Confidence 34778898899999999999999999999999999999998 234453 7899999999998754
No 7
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=98.73 E-value=2.7e-08 Score=61.55 Aligned_cols=62 Identities=19% Similarity=0.263 Sum_probs=54.4
Q ss_pred EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-e--eeccccccchHHHHHHHHHhCCccce
Q 030235 100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-E--KQTTVQATGVAANLVEIIQGSGFKLQ 167 (181)
Q Consensus 100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~--kqttvqatgvassLvEAIe~aGFevq 167 (181)
+.|+-+|-.-.+|..+|+++|..++||.+++|++..+.++| - ..++ .+.|.++|+++||++.
T Consensus 5 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~G~~~~ 69 (72)
T 1osd_A 5 VTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTS------VQKLTKATADAGYPSS 69 (72)
T ss_dssp EEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCC------HHHHHHHHHHTTCCCE
T ss_pred EEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHhcCCCeE
Confidence 46888998899999999999999999999999999999999 2 2345 3789999999999864
No 8
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=98.72 E-value=9.5e-09 Score=62.09 Aligned_cols=62 Identities=18% Similarity=0.287 Sum_probs=54.2
Q ss_pred EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccce
Q 030235 100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQ 167 (181)
Q Consensus 100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevq 167 (181)
+.|+-+|---.+|+.+|+++|..++||.+++|++..+.++|....+ .+.|.++|+++||+++
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~------~~~i~~~i~~~G~~~~ 64 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALG------EEQLRTAIASAGYEVE 64 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSC------HHHHHHHHHHTTCCCC
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCC------HHHHHHHHHHcCCCCC
Confidence 3477788888899999999999999999999999999999954455 4889999999999863
No 9
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=98.72 E-value=1.8e-08 Score=62.42 Aligned_cols=63 Identities=24% Similarity=0.469 Sum_probs=54.7
Q ss_pred EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-e--eeccccccchHHHHHHHHHhCCccce
Q 030235 99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-E--KQTTVQATGVAANLVEIIQGSGFKLQ 167 (181)
Q Consensus 99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~--kqttvqatgvassLvEAIe~aGFevq 167 (181)
.+.|+-+|---.+|+..|+++|..++||.+++|++..+.++| - ..++ .+.|.++|+++||+++
T Consensus 6 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~G~~~~ 71 (71)
T 2l3m_A 6 QLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVT------LKDIVAVIEDQGYDVQ 71 (71)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSC------HHHHHHHHHHTTCEEC
T ss_pred EEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHcCCCCC
Confidence 456888898889999999999999999999999999999999 2 3445 3789999999999863
No 10
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=98.71 E-value=2.8e-08 Score=64.69 Aligned_cols=64 Identities=16% Similarity=0.319 Sum_probs=56.4
Q ss_pred EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccceeec
Q 030235 99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTLN 170 (181)
Q Consensus 99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqtl~ 170 (181)
..-|+-+|-.-.+|+.+|+++|+. +||.+++|++..+.++|.-. + .+.|+++|+++||++..+.
T Consensus 6 ~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~------~~~i~~~i~~~Gy~~~~~~ 69 (73)
T 3fry_A 6 KIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-D------VDKYIKAVEAAGYQAKLRS 69 (73)
T ss_dssp EEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-G------HHHHHHHHHHTTCEEEECC
T ss_pred EEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-C------HHHHHHHHHHcCCceEecC
Confidence 346888999999999999999999 99999999999999999333 5 4899999999999987654
No 11
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=98.71 E-value=2.1e-08 Score=60.93 Aligned_cols=61 Identities=20% Similarity=0.246 Sum_probs=53.0
Q ss_pred EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEe--eeccccccchHHHHHHHHHhCCccc
Q 030235 100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVE--KQTTVQATGVAANLVEIIQGSGFKL 166 (181)
Q Consensus 100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~--kqttvqatgvassLvEAIe~aGFev 166 (181)
+.|+-+|-.-.+|+.+|+++|+.++||.+++|++..+.+++. ...+ .+.|.++|+++||++
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~------~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 3 ATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPAT------QDLIKEALLDAGQEV 65 (66)
T ss_dssp EEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCC------HHHHHHHHHHHTCCC
T ss_pred EEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCC------HHHHHHHHHHcCCCc
Confidence 457788888999999999999999999999999999999992 2224 488999999999976
No 12
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=98.70 E-value=2.2e-08 Score=61.57 Aligned_cols=64 Identities=19% Similarity=0.336 Sum_probs=53.9
Q ss_pred EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE--eeeccccccchHHHHHHHHHhCCccceee
Q 030235 100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV--EKQTTVQATGVAANLVEIIQGSGFKLQTL 169 (181)
Q Consensus 100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV--~kqttvqatgvassLvEAIe~aGFevqtl 169 (181)
+.|+-+|---.+|...|+++|..++||.+++|++..+.++| ...++ .+.|.++|+++||++..+
T Consensus 5 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~------~~~i~~~i~~~G~~~~~~ 70 (71)
T 2xmw_A 5 INLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETT------PQILTDAVERAGYHARVL 70 (71)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---C------HHHHHHHHHHHTCEEEEE
T ss_pred EEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCC------HHHHHHHHHHcCCCceeC
Confidence 45778888889999999999999999999999999999999 22345 478999999999987643
No 13
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=98.68 E-value=3.8e-08 Score=63.47 Aligned_cols=63 Identities=16% Similarity=0.186 Sum_probs=53.6
Q ss_pred EEEeeccCCCCCchHHHHHHhccCC-CceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccceee
Q 030235 100 MYFQADGAMNETAIPAVTQALQGTE-GISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTL 169 (181)
Q Consensus 100 m~f~aegt~~e~cV~sVTkALE~le-GVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqtl 169 (181)
+.|+-+ ---.+|+.+|+++|..++ ||.+++|++..+.++|...++ .+.|+++|+++||++..+
T Consensus 7 ~~~~v~-m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~------~~~i~~~i~~~Gy~~~~~ 70 (73)
T 1cc8_A 7 YQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLP------YDFILEKIKKTGKEVRSG 70 (73)
T ss_dssp EEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSC------HHHHHHHHHTTSSCEEEE
T ss_pred EEEEEe-eECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCC------HHHHHHHHHHhCCCceee
Confidence 446666 556899999999999999 999999999999999954556 489999999999997543
No 14
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=98.67 E-value=5e-08 Score=62.20 Aligned_cols=65 Identities=23% Similarity=0.337 Sum_probs=56.0
Q ss_pred EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCccceee
Q 030235 99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQTL 169 (181)
Q Consensus 99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqtl 169 (181)
.+.|+-+|-.-.+|..+|+++|..++||.+++|++..+.++| +..++ .+.|.++|+++||++..+
T Consensus 9 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~Gy~~~~~ 76 (79)
T 1kvi_A 9 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQT------PKTLQEAIDDMGFDAVIH 76 (79)
T ss_dssp EEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCC------HHHHHHHHHHHCCCEEEC
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCC------HHHHHHHHHHCCCceEec
Confidence 456888998899999999999999999999999999999999 22344 478999999999987544
No 15
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=98.66 E-value=4.2e-08 Score=61.78 Aligned_cols=64 Identities=23% Similarity=0.352 Sum_probs=55.4
Q ss_pred EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCcccee
Q 030235 99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQT 168 (181)
Q Consensus 99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqt 168 (181)
.+.|+-+|-.-.+|..+|+++|..++||.+++|++..+.++| +..++ .+.|.++|+++||++.-
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~Gy~~~~ 69 (75)
T 3cjk_B 3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQT------PKTLQEAIDDMGFDAVI 69 (75)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCC------HHHHHHHHHHTTCCEEE
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHcCCceEe
Confidence 456888898889999999999999999999999999999999 22345 37899999999998753
No 16
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=98.64 E-value=4e-08 Score=58.95 Aligned_cols=62 Identities=18% Similarity=0.403 Sum_probs=53.4
Q ss_pred EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCccce
Q 030235 100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQ 167 (181)
Q Consensus 100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevq 167 (181)
+-|+-+|---.+|...|+++|..++||.+++|++..+.++| +..++ .+.|.++|+++||++.
T Consensus 4 ~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~G~~~~ 68 (69)
T 2qif_A 4 KTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVS------VKDIADAIEDQGYDVA 68 (69)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCC------HHHHHHHHHHTTCEEC
T ss_pred EEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHcCCCcc
Confidence 34778888889999999999999999999999999999998 23445 3789999999999763
No 17
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=98.63 E-value=4.3e-08 Score=60.64 Aligned_cols=61 Identities=21% Similarity=0.340 Sum_probs=52.8
Q ss_pred EEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE--eeeccccccchHHHHHHHHHhCCccce
Q 030235 101 YFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV--EKQTTVQATGVAANLVEIIQGSGFKLQ 167 (181)
Q Consensus 101 ~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV--~kqttvqatgvassLvEAIe~aGFevq 167 (181)
.|+-+|-.-.+|+.+|+++|..++||.+++|++..+.++| ....+ ...|.++|+++||++.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~------~~~i~~~i~~~Gy~~~ 65 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTS------PDALTAAVAGLGYKAT 65 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSC------HHHHHHHHHTTTSEEE
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCC------HHHHHHHHHHCCCceE
Confidence 3677888889999999999999999999999999999999 22234 4889999999999864
No 18
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=98.62 E-value=9.1e-08 Score=60.38 Aligned_cols=64 Identities=16% Similarity=0.268 Sum_probs=54.9
Q ss_pred EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-eeeccccccchHHHHHHHHHhCCcccee
Q 030235 99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-EKQTTVQATGVAANLVEIIQGSGFKLQT 168 (181)
Q Consensus 99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~kqttvqatgvassLvEAIe~aGFevqt 168 (181)
.+.|+-+|---.+|+.+|+++|..++||.+++|++..+.++| ..+.. .+.|.++|+++||++..
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~------~~~i~~~i~~~Gy~~~~ 68 (73)
T 1mwy_A 4 RYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDI------RAQVESALQKAGYSLRD 68 (73)
T ss_dssp EEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCC------HHHHHHHHHHHTCEEEE
T ss_pred EEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCC------HHHHHHHHHHcCCcccc
Confidence 456888898899999999999999999999999999999999 22211 47899999999998754
No 19
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=98.62 E-value=3.9e-08 Score=61.26 Aligned_cols=65 Identities=14% Similarity=0.240 Sum_probs=55.2
Q ss_pred EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-ee--eccccccchHHHHHHHHHhCCccceeec
Q 030235 100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-EK--QTTVQATGVAANLVEIIQGSGFKLQTLN 170 (181)
Q Consensus 100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~k--qttvqatgvassLvEAIe~aGFevqtl~ 170 (181)
+.|+-+|-.-.+|..+|+++|..++||.+++|++..+.++| .. .++ .+.|.++|+++||++..+.
T Consensus 6 ~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~G~~~~~~~ 73 (75)
T 1yjr_A 6 LELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIG------PRDIIHTIESLGFEPSLVK 73 (75)
T ss_dssp EEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTH------HHHHHHHHHHHHCEEEESS
T ss_pred EEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHcCCCceeec
Confidence 45778898899999999999999999999999999999999 22 234 3789999999999876543
No 20
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=98.62 E-value=2.7e-08 Score=61.53 Aligned_cols=63 Identities=17% Similarity=0.322 Sum_probs=54.2
Q ss_pred EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-ee--eccccccchHHHHHHHHHhCCcccee
Q 030235 100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-EK--QTTVQATGVAANLVEIIQGSGFKLQT 168 (181)
Q Consensus 100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~k--qttvqatgvassLvEAIe~aGFevqt 168 (181)
+.|+-+|---.+|+.+|+++|..++||.+++|++..+.++| .. .++ .+.|.++|+++||++.-
T Consensus 5 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~G~~~~~ 70 (72)
T 1aw0_A 5 TVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTS------PETLRGAIEDMGFDATL 70 (72)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCC------HHHHHHHHHHHTCEEEE
T ss_pred EEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCC------HHHHHHHHHHCCCCcEe
Confidence 45778888888999999999999999999999999999999 22 345 47899999999998643
No 21
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=98.62 E-value=1e-07 Score=59.06 Aligned_cols=64 Identities=19% Similarity=0.326 Sum_probs=55.4
Q ss_pred EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCcccee
Q 030235 99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQT 168 (181)
Q Consensus 99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqt 168 (181)
.+.|+-+|---.+|...|+++|..++||.+++|++..+.++| +..++ .+.|.++|+++||++..
T Consensus 7 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~G~~~~~ 73 (76)
T 1opz_A 7 EIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETG------TAAIQEKIEKLGYHVVI 73 (76)
T ss_dssp EEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCC------HHHHHHHHHHHTCEEEC
T ss_pred EEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHCCCceec
Confidence 456888998899999999999999999999999999999998 23445 37899999999998754
No 22
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=98.62 E-value=8.8e-08 Score=63.00 Aligned_cols=64 Identities=14% Similarity=0.286 Sum_probs=55.7
Q ss_pred eEEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCccce
Q 030235 98 LTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQ 167 (181)
Q Consensus 98 l~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevq 167 (181)
-.+.|+-+|-.-.+|+.+|+++|..++||.+++|++..+.++| +..++ ...|.++|+++||++.
T Consensus 9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~Gy~~~ 75 (84)
T 1q8l_A 9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLIS------VEEMKKQIEAMGFPAF 75 (84)
T ss_dssp EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCC------HHHHHHHHHHTTCCEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHcCCceE
Confidence 3566888998899999999999999999999999999999999 22345 3789999999999864
No 23
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=98.56 E-value=4.5e-08 Score=66.95 Aligned_cols=62 Identities=16% Similarity=0.221 Sum_probs=54.8
Q ss_pred EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccc
Q 030235 99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKL 166 (181)
Q Consensus 99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFev 166 (181)
.+.|+-+|---.+|+.+|+++|+.++||.+++|++..+.++|...++ .+.|+++|+++||++
T Consensus 23 ~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~------~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 23 GLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSD------AAHIAEIITAAGYTP 84 (85)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCC------HHHHHHHHHHTTCCC
T ss_pred EEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCC------HHHHHHHHHHcCCCC
Confidence 34578888888999999999999999999999999999999954455 488999999999985
No 24
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=98.53 E-value=2.2e-07 Score=65.69 Aligned_cols=70 Identities=24% Similarity=0.291 Sum_probs=58.8
Q ss_pred EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-e--eeccccccchHHHHHHHHHhCCccceeeccccc
Q 030235 99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-E--KQTTVQATGVAANLVEIIQGSGFKLQTLNLSFD 174 (181)
Q Consensus 99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~--kqttvqatgvassLvEAIe~aGFevqtl~lsf~ 174 (181)
.+.|+-+|---.+|+.+|+++|..++||.+++|++..+.++| . ..++ .+.|.++|+++||++......|+
T Consensus 9 ~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~------~~~i~~~i~~~Gy~~~~~~~~l~ 81 (111)
T 2ofg_X 9 TQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVS------EITIQERIAALGYTLAEPKSSVT 81 (111)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCS------HHHHHHHHHTTTCCEECCCCCCC
T ss_pred EEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCC------HHHHHHHHHHcCCeeeecceeee
Confidence 456888998899999999999999999999999999999999 2 2345 37899999999999866544443
No 25
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=98.52 E-value=6.7e-08 Score=61.55 Aligned_cols=64 Identities=23% Similarity=0.386 Sum_probs=55.1
Q ss_pred EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-e--eeccccccchHHHHHHHHHhCCcccee
Q 030235 99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-E--KQTTVQATGVAANLVEIIQGSGFKLQT 168 (181)
Q Consensus 99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~--kqttvqatgvassLvEAIe~aGFevqt 168 (181)
.+.|+-+|-.-.+|+.+|+++|..++||.+++|++..+.++| . ..++ .+.|.++|+++||++..
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~Gy~~~~ 70 (77)
T 1y3j_A 4 KCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQ------PPMIAEFIRELGFGATV 70 (77)
T ss_dssp EEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSC------HHHHHHHHHHHTSCEEE
T ss_pred EEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHcCCceEE
Confidence 356788898889999999999999999999999999999999 2 2344 37899999999998754
No 26
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=98.51 E-value=7.4e-08 Score=59.54 Aligned_cols=65 Identities=18% Similarity=0.410 Sum_probs=55.3
Q ss_pred EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE--eeeccccccchHHHHHHHHHhCCccceee
Q 030235 99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV--EKQTTVQATGVAANLVEIIQGSGFKLQTL 169 (181)
Q Consensus 99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV--~kqttvqatgvassLvEAIe~aGFevqtl 169 (181)
.+.|+-+|-.-.+|...|+++|..++||.+++|++..+.++| ...++ .+.|.++|+++||++..+
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~------~~~i~~~i~~~G~~~~~~ 69 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVT------ADSIKEIIEDCGFDCEIL 69 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSC------HHHHHHHHHHHTCCEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCC------HHHHHHHHHHCCCceEEc
Confidence 345788898889999999999999999999999999999999 32334 478999999999987543
No 27
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.51 E-value=2.2e-07 Score=65.19 Aligned_cols=72 Identities=18% Similarity=0.335 Sum_probs=58.8
Q ss_pred eeecCCcceEEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCcccee
Q 030235 90 VPVSPSDKLTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQT 168 (181)
Q Consensus 90 ~p~~~sd~l~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqt 168 (181)
.|+..-....+.|+-+ ---.+|+.+|+++|..++||.+++|++..+.++|...++ ...|+++|+++||++.-
T Consensus 11 ~~~~~~~~~~~~l~V~-m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~------~~~i~~~i~~~Gy~~~~ 82 (98)
T 2crl_A 11 DSGNQGTLCTLEFAVQ-MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLP------SQEVQALLEGTGRQAVL 82 (98)
T ss_dssp CCCCCCCCEEEEEEEC-CCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSC------HHHHHHHHHTTTSCEEE
T ss_pred CchhcccceEEEEEEe-eECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCC------HHHHHHHHHHhCCceEE
Confidence 3444333455668878 667899999999999999999999999999999954556 48899999999998754
No 28
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.50 E-value=1.8e-07 Score=66.48 Aligned_cols=66 Identities=21% Similarity=0.349 Sum_probs=58.0
Q ss_pred EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCccceeec
Q 030235 99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQTLN 170 (181)
Q Consensus 99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqtl~ 170 (181)
.+.|+-+|---.+|+.+|+++|..++||.+++|++..+.++| +..++ .+.|.++|+++||++....
T Consensus 75 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~Gy~~~~~~ 143 (151)
T 1p6t_A 75 KAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEAS------VSDLKEAVDKLGYKLKLKG 143 (151)
T ss_dssp EEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCC------HHHHHHHHHHHTCCEEESC
T ss_pred ccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCC------HHHHHHHHHHcCCCeEEcC
Confidence 457889999999999999999999999999999999999999 34456 4889999999999976543
No 29
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=98.49 E-value=1.6e-07 Score=63.68 Aligned_cols=65 Identities=17% Similarity=0.244 Sum_probs=55.2
Q ss_pred EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhC---Cccceeec
Q 030235 100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGS---GFKLQTLN 170 (181)
Q Consensus 100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~a---GFevqtl~ 170 (181)
+.|+-+|-.-.+|+.+|+++|..++||.+++|++..+.++| +..++. +.|.++|+++ ||++..++
T Consensus 5 ~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~------~~i~~~i~~~g~Ggy~~~~~~ 75 (90)
T 2g9o_A 5 ATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTP------ESLRKAIEAVSPGLYRVSITS 75 (90)
T ss_dssp EEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCT------HHHHHHHHTTSTTTCEEECCC
T ss_pred EEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCH------HHHHHHHHhccCCCeEEEEeC
Confidence 45778888888999999999999999999999999999999 334553 7899999999 59876443
No 30
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.43 E-value=1.8e-07 Score=65.83 Aligned_cols=63 Identities=19% Similarity=0.316 Sum_probs=55.7
Q ss_pred EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCccce
Q 030235 99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQ 167 (181)
Q Consensus 99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevq 167 (181)
.+.|+-+|---.+|+.+|+++|+.++||.+++|++..+.++| +..++ .+.|.++|+++||++.
T Consensus 81 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~Gy~~~ 146 (149)
T 2ew9_A 81 NIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIG------PRDIIKIIEEIGFHAS 146 (149)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSC------HHHHHHHHHHHTCEEE
T ss_pred eeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCC------HHHHHHHHHhCCCceE
Confidence 456888998899999999999999999999999999999999 33355 3889999999999864
No 31
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=98.39 E-value=3.1e-07 Score=57.41 Aligned_cols=62 Identities=13% Similarity=0.235 Sum_probs=52.3
Q ss_pred EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccceee
Q 030235 100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTL 169 (181)
Q Consensus 100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqtl 169 (181)
+.|+-+|---.+|+.+|+++|+.+ ||.+++|++..+.++|.-..+ ..|+++|+++||++..+
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-------~~i~~~i~~~Gy~~~~~ 64 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-------DSVLKKLEEIDYPVESY 64 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-------HHHHHHHHTTTCCCCBC
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-------HHHHHHHHHcCCceeeE
Confidence 346778888899999999999999 999999999999999932211 68999999999987643
No 32
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=98.33 E-value=3.1e-07 Score=57.96 Aligned_cols=64 Identities=22% Similarity=0.358 Sum_probs=54.6
Q ss_pred EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCccceee
Q 030235 100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQTL 169 (181)
Q Consensus 100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqtl 169 (181)
+.|+-+|---.+|..+|+++|..++||.+++|++..+.++| +..++ .+.|.++|+++||++...
T Consensus 5 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~G~~~~~~ 71 (80)
T 1jww_A 5 AEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEAS------VSDLKEAVDKLGYKLKLK 71 (80)
T ss_dssp EEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCC------HHHHHHHHHHHTSEEEEC
T ss_pred EEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHcCCeEEec
Confidence 45778888888999999999999999999999999999998 23445 378999999999987543
No 33
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=98.31 E-value=1.1e-06 Score=59.20 Aligned_cols=64 Identities=14% Similarity=0.310 Sum_probs=55.0
Q ss_pred EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-ee--eccccccchHHHHHHHHHhCCcccee
Q 030235 99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-EK--QTTVQATGVAANLVEIIQGSGFKLQT 168 (181)
Q Consensus 99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~k--qttvqatgvassLvEAIe~aGFevqt 168 (181)
.+.|+-+|-.-.+|+..|+++|..++||.++.|++..+.++| .. .++ ...|.++|+++||++..
T Consensus 17 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~Gy~~~~ 83 (95)
T 2kkh_A 17 KSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLIS------PFQIAKALNEARLEANV 83 (95)
T ss_dssp EEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCC------HHHHHHHHHHHTCCEEE
T ss_pred EEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCC------HHHHHHHHHHcCCceEE
Confidence 346888998899999999999999999999999999999999 22 234 37899999999998643
No 34
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.22 E-value=1.6e-06 Score=65.85 Aligned_cols=65 Identities=22% Similarity=0.355 Sum_probs=56.7
Q ss_pred eEEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCcccee
Q 030235 98 LTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQT 168 (181)
Q Consensus 98 l~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqt 168 (181)
-.+.|+-+|---.+|+.+|+++|..++||.+++|++..+.++| +..++ .+.|.++|+++||++..
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~Gy~~~~ 189 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVIS------PEELRAAIEDMGFEASV 189 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCC------HHHHHHHHHHHTSCEEE
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCC------HHHHHHHHHHcCCceEE
Confidence 3567899999999999999999999999999999999999999 23445 37899999999998754
No 35
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.11 E-value=4.1e-06 Score=58.87 Aligned_cols=63 Identities=19% Similarity=0.384 Sum_probs=54.4
Q ss_pred EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-e--eeccccccchHHHHHHHHHhCCccce
Q 030235 99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-E--KQTTVQATGVAANLVEIIQGSGFKLQ 167 (181)
Q Consensus 99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~--kqttvqatgvassLvEAIe~aGFevq 167 (181)
.+.|+-+|---.+|+.+|+++|+.++||.+++|++..+.++| . ..++ .+.|+++|+++||++.
T Consensus 5 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~G~~~~ 70 (149)
T 2ew9_A 5 KCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQ------PLEIAQFIQDLGFEAA 70 (149)
T ss_dssp EEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCC------HHHHHHHHHHHTCEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCC------HHHHHHHHhcCCCceE
Confidence 356888998889999999999999999999999999999998 2 2344 3789999999999875
No 36
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.06 E-value=8.8e-06 Score=66.19 Aligned_cols=64 Identities=14% Similarity=0.298 Sum_probs=54.7
Q ss_pred eEEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCcccee
Q 030235 98 LTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQT 168 (181)
Q Consensus 98 l~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqt 168 (181)
..+-|+-+ -.-.+|+.+|+++|+.++||.+++|++..+.++|...++ .+.|+++|+++||++.-
T Consensus 6 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~------~~~I~~aI~~~Gy~a~~ 69 (222)
T 1qup_A 6 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVA------PSTIINTLRNCGKDAII 69 (222)
T ss_dssp EEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSC------HHHHHHHHHHTTCCCEE
T ss_pred eEEEEEEc-cccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCC------HHHHHHHHHHcCCcccc
Confidence 34557777 556899999999999999999999999999999954555 48899999999999754
No 37
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.03 E-value=1e-05 Score=67.17 Aligned_cols=66 Identities=14% Similarity=0.278 Sum_probs=56.3
Q ss_pred ceEEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCccceee
Q 030235 97 KLTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQTL 169 (181)
Q Consensus 97 ~l~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqtl 169 (181)
...+.|+-+ -.-.+|+.+|+++|+.++||.+++|++..+.++|...++ .+.|+++|+++||++.-.
T Consensus 6 ~~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~------~~~I~~aIe~~Gy~a~~~ 71 (249)
T 1jk9_B 6 TYEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVA------PSTIINTLRNCGKDAIIR 71 (249)
T ss_dssp CEEEEEECC-CCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSC------HHHHHHHHHTTTCCCEEE
T ss_pred ceeEEEEEe-eccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCC------HHHHHHHHHHhCCCcccc
Confidence 455667777 556899999999999999999999999999999954556 489999999999997543
No 38
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=97.87 E-value=1.2e-05 Score=50.48 Aligned_cols=59 Identities=14% Similarity=0.232 Sum_probs=49.1
Q ss_pred EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEEeeeccccccchHHHHHHHHHhCCcccee
Q 030235 100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATVEKQTTVQATGVAANLVEIIQGSGFKLQT 168 (181)
Q Consensus 100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV~kqttvqatgvassLvEAIe~aGFevqt 168 (181)
..|+-+|---.+|..+|+++|..++||.+++|++..+.++|.-..+ .++|+++||...-
T Consensus 5 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----------~~~i~~~Gy~~~~ 63 (71)
T 2aj0_A 5 TVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----------IQQVEQAGAFEHL 63 (71)
T ss_dssp EEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----------HHHHHHHHTTTTC
T ss_pred EEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----------HHHHHHhCCCccc
Confidence 3577888888899999999999999999999999999999932222 4688999998643
No 39
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=97.72 E-value=5.8e-05 Score=53.38 Aligned_cols=61 Identities=20% Similarity=0.342 Sum_probs=51.7
Q ss_pred EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-e--eeccccccchHHHHHHHHHhCCccc
Q 030235 100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-E--KQTTVQATGVAANLVEIIQGSGFKL 166 (181)
Q Consensus 100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~--kqttvqatgvassLvEAIe~aGFev 166 (181)
..|+-+|---.+|+.+|+++|+.++||.++.|++..+.+.+ . ...+ ...|.++|+++||++
T Consensus 8 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~G~~~ 71 (151)
T 1p6t_A 8 IAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETG------TAAIQEKIEKLGYHV 71 (151)
T ss_dssp EEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSC------HHHHHHHHHHHTCEE
T ss_pred EEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCC------HHHHHHHHHHcCCcc
Confidence 34777887778999999999999999999999999999988 2 2334 377899999999965
No 40
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=97.66 E-value=5.6e-05 Score=57.33 Aligned_cols=62 Identities=19% Similarity=0.317 Sum_probs=53.0
Q ss_pred EEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE-e--eeccccccchHHHHHHHHHhC---Cccc
Q 030235 99 TMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV-E--KQTTVQATGVAANLVEIIQGS---GFKL 166 (181)
Q Consensus 99 ~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV-~--kqttvqatgvassLvEAIe~a---GFev 166 (181)
.+-|+-+|---.+|+.+|+++|..++||.+++|++..+.++| . ..++ ...|.++|+++ ||++
T Consensus 21 ~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~------~~~i~~~i~~~~~gg~~v 88 (202)
T 2rop_A 21 TLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTS------PVALQRAIEALPPGNFKV 88 (202)
T ss_dssp EEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCC------HHHHHHHHTTSSSSCSEE
T ss_pred EEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCC------HHHHHHHHHHhccCCeEE
Confidence 345888998889999999999999999999999999999999 2 2344 37899999998 4776
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=97.30 E-value=0.00014 Score=67.12 Aligned_cols=63 Identities=16% Similarity=0.335 Sum_probs=56.1
Q ss_pred EEEeeccCCCCCchHHHHHHhccCCCceeeEEEEecceEEE---eeeccccccchHHHHHHHHHhCCcccee
Q 030235 100 MYFQADGAMNETAIPAVTQALQGTEGISDLKVQVIEGIATV---EKQTTVQATGVAANLVEIIQGSGFKLQT 168 (181)
Q Consensus 100 m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLeeG~AtV---~kqttvqatgvassLvEAIe~aGFevqt 168 (181)
.-|+-+|---.+|+.+|+++|+.++||.+++|++..+.++| +..++ .+.|+++|+++||++..
T Consensus 4 ~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~------~~~i~~ai~~~Gy~~~~ 69 (723)
T 3j09_A 4 RTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRID------FETIKRVIEDLGYGVVD 69 (723)
T ss_dssp EEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCC------HHHHHHHHHHHCCEESS
T ss_pred EEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCC------HHHHHHHHHhcCCcccc
Confidence 45788899999999999999999999999999999999999 34456 48999999999999854
No 42
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=71.49 E-value=6.3 Score=29.95 Aligned_cols=55 Identities=13% Similarity=0.192 Sum_probs=43.0
Q ss_pred CCCchHHHHHHhccCCCceeeEEEEecc-------eEEE-eeeccccccchHHHHHHHHHhCCccceee
Q 030235 109 NETAIPAVTQALQGTEGISDLKVQVIEG-------IATV-EKQTTVQATGVAANLVEIIQGSGFKLQTL 169 (181)
Q Consensus 109 ~e~cV~sVTkALE~leGVsdVkVsLeeG-------~AtV-~kqttvqatgvassLvEAIe~aGFevqtl 169 (181)
.+..+.-+.+.|..++||..|++++.|= ..++ -...+ -+.|+++|++.|=-+..+
T Consensus 17 h~P~ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dId------fd~I~~~IE~~GgvIHSI 79 (100)
T 3bpd_A 17 HEPKTIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLD------YEQIKGVIEDMGGVIHSV 79 (100)
T ss_dssp SCSCHHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEEC------HHHHHHHHHTTTCEEEEE
T ss_pred CCCCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCC------HHHHHHHHHHcCCeEEee
Confidence 6778899999999999999999998652 1222 45677 499999999999666543
No 43
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=71.42 E-value=6.2 Score=29.77 Aligned_cols=56 Identities=9% Similarity=0.339 Sum_probs=43.7
Q ss_pred CCCCchHHHHHHhccCCCceeeEEEEecc-------eEEE-eeeccccccchHHHHHHHHHhCCccceee
Q 030235 108 MNETAIPAVTQALQGTEGISDLKVQVIEG-------IATV-EKQTTVQATGVAANLVEIIQGSGFKLQTL 169 (181)
Q Consensus 108 ~~e~cV~sVTkALE~leGVsdVkVsLeeG-------~AtV-~kqttvqatgvassLvEAIe~aGFevqtl 169 (181)
+.+..+.-+.+.|..++||..|++++.+= ..++ -...+ -+.|+++|++.|=-++.+
T Consensus 15 ~h~P~ivd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~id------fd~I~~~IE~~Gg~IHSI 78 (96)
T 2x3d_A 15 IRGTSIVDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLN------FDDIRKMLEEEGCAIHSI 78 (96)
T ss_dssp SSSSCHHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCC------HHHHHHHHHHTTCEEEEE
T ss_pred CCCCCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCC------HHHHHHHHHHcCCeEEee
Confidence 46788999999999999999999998652 1222 44567 499999999999766544
No 44
>2rrl_A FLIK, flagellar HOOK-length control protein; FLHB, bacterial flagella motor, P transport; NMR {Salmonella typhimurium}
Probab=69.65 E-value=5.3 Score=32.18 Aligned_cols=52 Identities=13% Similarity=0.174 Sum_probs=38.1
Q ss_pred CceeeEEEEecceEEE---ee--eccccccchHHHHHHHHHhCCccceeecccccCc
Q 030235 125 GISDLKVQVIEGIATV---EK--QTTVQATGVAANLVEIIQGSGFKLQTLNLSFDDE 176 (181)
Q Consensus 125 GVsdVkVsLeeG~AtV---~k--qttvqatgvassLvEAIe~aGFevqtl~lsf~d~ 176 (181)
|=-+|+|.+++|.+.+ .. .+---.-+-...||+++.+.||.+..++.+-++.
T Consensus 99 G~l~V~l~~~~~q~~v~f~a~~~~vReaLe~~lp~LRe~La~qGi~L~~v~Vs~~~~ 155 (169)
T 2rrl_A 99 GQVHISLKLDDNQAQLQMVSPHSHVRAALEAALPMLRTQLAESGIQLGQSSISSESF 155 (169)
T ss_dssp CCEEEEEEEETTEEEEEEECCSSHHHHHHHHTHHHHHHHHHTTTCEEEEEEEESSCC
T ss_pred CcEEEEEEEECCEEEEEEEcCCHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEecCCc
Confidence 5568999999999988 11 1111122335789999999999999999987653
No 45
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=66.52 E-value=14 Score=27.86 Aligned_cols=55 Identities=16% Similarity=0.323 Sum_probs=43.1
Q ss_pred CCCchHHHHHHhccCCCceeeEEEEecc-------eEEE-eeeccccccchHHHHHHHHHhCCccceee
Q 030235 109 NETAIPAVTQALQGTEGISDLKVQVIEG-------IATV-EKQTTVQATGVAANLVEIIQGSGFKLQTL 169 (181)
Q Consensus 109 ~e~cV~sVTkALE~leGVsdVkVsLeeG-------~AtV-~kqttvqatgvassLvEAIe~aGFevqtl 169 (181)
.+..+.-+.+.|..++||..|++++.+= ..++ -...+ -+.|+++|++.|=-++.+
T Consensus 17 h~p~i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id------~d~I~~~IE~~Gg~IHSI 79 (97)
T 2raq_A 17 HEPIIPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLD------FDEITRAIESYGGSIHSV 79 (97)
T ss_dssp SCSCHHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCC------HHHHHHHHHHTTCEEEEE
T ss_pred CCCCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCC------HHHHHHHHHHcCCeEEee
Confidence 6778899999999999999999998752 1222 44567 499999999999766544
No 46
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=66.12 E-value=4 Score=28.72 Aligned_cols=25 Identities=16% Similarity=0.442 Sum_probs=20.6
Q ss_pred CCchHHHHHHhccCCCceeeEEEEe
Q 030235 110 ETAIPAVTQALQGTEGISDLKVQVI 134 (181)
Q Consensus 110 e~cV~sVTkALE~leGVsdVkVsLe 134 (181)
+.-...|+++|.+++||.+|+|.+.
T Consensus 59 ~~l~~~i~~al~~l~gv~~v~V~l~ 83 (103)
T 1uwd_A 59 GMILSDAEEAIKKIEGVNNVEVELT 83 (103)
T ss_dssp HHHHHHHHHHHHTSSSCCEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCcceEEEEEe
Confidence 3345678999999999999999864
No 47
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=65.00 E-value=4.5 Score=28.57 Aligned_cols=28 Identities=29% Similarity=0.402 Sum_probs=22.3
Q ss_pred CCCCchHHHHHHhccCCCceeeEEEEec
Q 030235 108 MNETAIPAVTQALQGTEGISDLKVQVIE 135 (181)
Q Consensus 108 ~~e~cV~sVTkALE~leGVsdVkVsLee 135 (181)
+-+.-...|+++|.+++||.+|+|.+.-
T Consensus 56 ~~~~l~~~i~~al~~l~gv~~V~V~l~~ 83 (103)
T 3cq1_A 56 LHDSLGEAVRQALSRLPGVEEVEVEVTF 83 (103)
T ss_dssp SSCHHHHHHHHHHHTSTTCCEEEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCceeEEEEEec
Confidence 3444567899999999999999998753
No 48
>4f3q_A Transcriptional regulatory protein CBU_1566; YEBC family; 2.15A {Coxiella burnetii}
Probab=62.80 E-value=6.8 Score=33.11 Aligned_cols=48 Identities=13% Similarity=0.216 Sum_probs=35.5
Q ss_pred HHHhccCCCceeeEEEEecceEEE-eeeccccccchHHHHHHHHHhCCccceeecccc
Q 030235 117 TQALQGTEGISDLKVQVIEGIATV-EKQTTVQATGVAANLVEIIQGSGFKLQTLNLSF 173 (181)
Q Consensus 117 TkALE~leGVsdVkVsLeeG~AtV-~kqttvqatgvassLvEAIe~aGFevqtl~lsf 173 (181)
.-||++ |+.||..+ ++|...| +.+.+. ..++++++++||++..-.+.|
T Consensus 156 e~aiea--GAeDv~~~-edg~~~v~t~p~~~------~~V~~aL~~~g~~~~~aei~~ 204 (247)
T 4f3q_A 156 EIALEV--GAEDVTTN-DDGSIDVTTLPEDF------EKIRNAMKAADLNPSHAEVTV 204 (247)
T ss_dssp HHHHHH--TCSEEEEC-TTSCEEEEECGGGH------HHHHHHHHHTTCCCSEEEEEE
T ss_pred HHHHhC--CCceeeec-CCceEEEEECHHHH------HHHHHHHHHcCCCeeEEEEEE
Confidence 345554 88888753 5667777 888884 899999999999987655554
No 49
>2hiy_A Hypothetical protein; COG3797, structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GOL; 1.40A {Streptococcus pneumoniae} SCOP: d.356.1.1
Probab=57.06 E-value=6.4 Score=31.11 Aligned_cols=59 Identities=15% Similarity=0.189 Sum_probs=45.9
Q ss_pred hHHHHHHhccCCCceeeEEEEecceEEE-eeeccccccchHHHHHHHHHh-CCccceeecccccC
Q 030235 113 IPAVTQALQGTEGISDLKVQVIEGIATV-EKQTTVQATGVAANLVEIIQG-SGFKLQTLNLSFDD 175 (181)
Q Consensus 113 V~sVTkALE~leGVsdVkVsLeeG~AtV-~kqttvqatgvassLvEAIe~-aGFevqtl~lsf~d 175 (181)
-.-+..+|+++ |-.+|+=.+..|++.| +.. + ...++..|.++|++ .||++.-+-++-++
T Consensus 24 MadLr~~l~~l-Gf~~V~TyI~SGNvvF~s~~-~--~~~l~~~ie~~l~~~fg~~v~v~vrs~~e 84 (183)
T 2hiy_A 24 MAELRQELTNL-GLEKVESYINSGNIFFTSID-S--KAQLVEKLETFFAVHYPFIQSFSLLSLED 84 (183)
T ss_dssp HHHHHHHHHHH-TCEEEEEETTTTEEEEEECS-C--HHHHHHHHHHHHHHHCTTCCCCEEEEHHH
T ss_pred HHHHHHHHHHc-CCccceEEEecCCEEEecCC-C--HHHHHHHHHHHHHHhcCCCCCEEEecHHH
Confidence 35688999999 9999999999999999 433 4 23467888888865 99999876655443
No 50
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=56.07 E-value=6.6 Score=28.13 Aligned_cols=22 Identities=18% Similarity=0.496 Sum_probs=19.6
Q ss_pred hHHHHHHh-ccCCCceeeEEEEe
Q 030235 113 IPAVTQAL-QGTEGISDLKVQVI 134 (181)
Q Consensus 113 V~sVTkAL-E~leGVsdVkVsLe 134 (181)
...|+++| .+++||.+|+|.+.
T Consensus 64 ~~~i~~al~~~l~Gv~~V~V~l~ 86 (108)
T 3lno_A 64 VSDVKKVLSTNVPEVNEIEVNVV 86 (108)
T ss_dssp HHHHHHHHHHHCTTCCCEEEEEC
T ss_pred HHHHHHHHHHhCCCCceEEEEEE
Confidence 56789999 99999999999885
No 51
>1mw7_A Hypothetical protein HP0162; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Helicobacter pylori} SCOP: e.39.1.1
Probab=48.89 E-value=21 Score=29.95 Aligned_cols=45 Identities=13% Similarity=0.170 Sum_probs=35.2
Q ss_pred HhccCCCceeeEEEEecceEEE-eeeccccccchHHHHHHHHHhCCccceeecccc
Q 030235 119 ALQGTEGISDLKVQVIEGIATV-EKQTTVQATGVAANLVEIIQGSGFKLQTLNLSF 173 (181)
Q Consensus 119 ALE~leGVsdVkVsLeeG~AtV-~kqttvqatgvassLvEAIe~aGFevqtl~lsf 173 (181)
||+ .|+.||. -+++...| +.+.+. ..++++++.+||++..-.+.|
T Consensus 158 ale--aGAeDv~--~e~~~~~v~t~p~~~------~~V~~aL~~~g~~~~~aei~~ 203 (240)
T 1mw7_A 158 LID--YGLEELE--EVEDKIIIRGDYNSF------KLLNEGFESLKLPILKASLQR 203 (240)
T ss_dssp HGG--GTEEEEE--EETTEEEEEEEGGGH------HHHHHHHHHTTCCCSEEEEEE
T ss_pred HHH--CCCceee--cCCceEEEEECHHHH------HHHHHHHHHcCCCeeeeeeEe
Confidence 454 3888886 36788888 888885 999999999999987666554
No 52
>1kon_A Protein YEBC, YEBC; alpha/beta, two-domains, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics; 2.20A {Escherichia coli} SCOP: e.39.1.1
Probab=47.10 E-value=15 Score=31.02 Aligned_cols=47 Identities=19% Similarity=0.355 Sum_probs=34.5
Q ss_pred HHhccCCCceeeEEEEecceEEE-eeeccccccchHHHHHHHHHhCCccceeecccc
Q 030235 118 QALQGTEGISDLKVQVIEGIATV-EKQTTVQATGVAANLVEIIQGSGFKLQTLNLSF 173 (181)
Q Consensus 118 kALE~leGVsdVkVsLeeG~AtV-~kqttvqatgvassLvEAIe~aGFevqtl~lsf 173 (181)
-||+ .|+.||..+ ++|...| +.+.+. ..++++++++||++..-.+.|
T Consensus 156 ~ale--aGAeDv~~~-e~~~~~v~t~p~~~------~~V~~aL~~~g~~~~~aei~~ 203 (249)
T 1kon_A 156 AALE--AGAEDVVTY-DDGAIDVYTAWEEM------GKVRDALEAAGLKADSAEVSM 203 (249)
T ss_dssp HHHH--HTCSEEEEC-TTSCEEEEEEGGGH------HHHHHHHHHTTCCCSEEEEEE
T ss_pred HHHh--CCCceeeec-CCceEEEEECHHHH------HHHHHHHHHcCCCeeeeeeEE
Confidence 3454 277777542 5777777 888885 999999999999987665554
No 53
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=44.59 E-value=73 Score=22.63 Aligned_cols=53 Identities=15% Similarity=0.172 Sum_probs=35.5
Q ss_pred CCCCchHHHHHHhccCCCce--eeEEEEecceEEE-eeeccccccchHHHHHHHHHhCCccce
Q 030235 108 MNETAIPAVTQALQGTEGIS--DLKVQVIEGIATV-EKQTTVQATGVAANLVEIIQGSGFKLQ 167 (181)
Q Consensus 108 ~~e~cV~sVTkALE~leGVs--dVkVsLeeG~AtV-~kqttvqatgvassLvEAIe~aGFevq 167 (181)
=..|.+.++.++|.+- ||. .+-....++.+.+ -..-+ .+..++++.++||++.
T Consensus 81 d~pGvla~i~~~L~~~-~InI~~~~~~~~~~~~~~~i~~~d------~~~A~~~L~~~g~~v~ 136 (144)
T 2f06_A 81 NVPGALAKVLGFLSAE-GVFIEYMYSFANNNVANVVIRPSN------MDKCIEVLKEKKVDLL 136 (144)
T ss_dssp SSTTHHHHHHHHHHHT-TCCEEEEEEEEETTEEEEEEEESC------HHHHHHHHHHTTCEEE
T ss_pred CCCcHHHHHHHHHHHC-CCCEEEEEEEccCCcEEEEEEeCC------HHHHHHHHHHcCCEEe
Confidence 3468899999999765 332 2222215666666 23335 4889999999999983
No 54
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=42.73 E-value=50 Score=23.04 Aligned_cols=49 Identities=16% Similarity=0.156 Sum_probs=31.1
Q ss_pred CCceeeEEEEecceEEE----eeeccccccchHHHHHHHHHh-CCccceeeccccc
Q 030235 124 EGISDLKVQVIEGIATV----EKQTTVQATGVAANLVEIIQG-SGFKLQTLNLSFD 174 (181)
Q Consensus 124 eGVsdVkVsLeeG~AtV----~kqttvqatgvassLvEAIe~-aGFevqtl~lsf~ 174 (181)
.-|.+|+ +++|.++| +.+.-+...-+...++++++. .|.+-..+++.++
T Consensus 31 G~V~~v~--v~~~~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~~~ 84 (103)
T 3cq1_A 31 GLIYDLV--VEPPRAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVTFE 84 (103)
T ss_dssp TCEEEEE--EETTEEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEECCS
T ss_pred CceEEEE--EECCEEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEecC
Confidence 3355544 46788777 333334444556777777776 4888777777665
No 55
>1lfp_A Hypothetical protein AQ_1575; NEW fold, thermostability, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 1.72A {Aquifex aeolicus} SCOP: e.39.1.1
Probab=42.00 E-value=23 Score=29.92 Aligned_cols=46 Identities=13% Similarity=0.294 Sum_probs=33.6
Q ss_pred HHhccCCCceeeEEEEecceEEE-eeeccccccchHHHHHHHHHhCCccceeecccc
Q 030235 118 QALQGTEGISDLKVQVIEGIATV-EKQTTVQATGVAANLVEIIQGSGFKLQTLNLSF 173 (181)
Q Consensus 118 kALE~leGVsdVkVsLeeG~AtV-~kqttvqatgvassLvEAIe~aGFevqtl~lsf 173 (181)
-||+ .|+.||. -+++...| +.+.+. ..++++++++||++..-.+.|
T Consensus 155 ~ale--aGAeDv~--~e~~~~~v~t~p~~~------~~V~~aL~~~g~~~~~aei~~ 201 (249)
T 1lfp_A 155 KAIE--VGAEDVQ--PGEEVHIIYTVPEEL------YEVKENLEKLGVPIEKAQITW 201 (249)
T ss_dssp HHHH--HTCSEEE--CCSSEEEEEECGGGH------HHHHHHHHTTTCCCSEEEEEE
T ss_pred HHHh--cCCceee--cCCceEEEEECHHHH------HHHHHHHHHcCCCeeeeeeEE
Confidence 3454 2777776 35677777 888884 899999999999887665554
No 56
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=34.49 E-value=60 Score=22.56 Aligned_cols=48 Identities=19% Similarity=0.241 Sum_probs=28.4
Q ss_pred CceeeEEEEec-ceEEE----eeeccccccchHHHHHHHHHh-CCccceeeccccc
Q 030235 125 GISDLKVQVIE-GIATV----EKQTTVQATGVAANLVEIIQG-SGFKLQTLNLSFD 174 (181)
Q Consensus 125 GVsdVkVsLee-G~AtV----~kqttvqatgvassLvEAIe~-aGFevqtl~lsf~ 174 (181)
-|.+|+| ++ |.++| +.+.-....-+...++++++. .|.+-..+++.++
T Consensus 32 ~V~~v~v--~~~~~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~~~ 85 (103)
T 1uwd_A 32 LVYDIQI--DDQNNVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELTFD 85 (103)
T ss_dssp CCCCEEE--CTTCEEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEECCS
T ss_pred CeeEEEE--cCCCEEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEecC
Confidence 3555554 55 78877 333333334445566666666 4888777777665
No 57
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=33.04 E-value=84 Score=22.46 Aligned_cols=30 Identities=20% Similarity=0.317 Sum_probs=22.1
Q ss_pred CCchHHHHHHhccCCCceeeEE-EEecceEEE
Q 030235 110 ETAIPAVTQALQGTEGISDLKV-QVIEGIATV 140 (181)
Q Consensus 110 e~cV~sVTkALE~leGVsdVkV-sLeeG~AtV 140 (181)
.+-+..|.++|.++||| ++.. +-++|...|
T Consensus 16 p~~~~~V~~~L~~ipgv-Ei~~~~~~~GkiVV 46 (95)
T 2jsx_A 16 SERISDISTQLNAFPGC-EVAVSDAPSGQLIV 46 (95)
T ss_dssp TTSHHHHHHHHTTSTTE-EEEEEETTTTEEEE
T ss_pred CCCHHHHHHHHHCCCCe-EEEEecCCCCCEEE
Confidence 45689999999999999 4433 334676666
No 58
>1gh8_A Translation elongation factor 1BETA; alpha-beta sandwich, gene regulation, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.58.12.1
Probab=29.42 E-value=73 Score=22.93 Aligned_cols=43 Identities=23% Similarity=0.359 Sum_probs=33.8
Q ss_pred eee-cCCcceEEEEeeccCCCCCchHHHHHHhccCCCceeeEEEEe
Q 030235 90 VPV-SPSDKLTMYFQADGAMNETAIPAVTQALQGTEGISDLKVQVI 134 (181)
Q Consensus 90 ~p~-~~sd~l~m~f~aegt~~e~cV~sVTkALE~leGVsdVkVsLe 134 (181)
+|+ +---+|.+++--+- .++-+..+..++++++||.+|+|--.
T Consensus 42 ~piafGlk~L~i~~vveD--~~~~td~lee~i~~~e~Vqsvdv~~~ 85 (89)
T 1gh8_A 42 EPIAFGLVALNVMVVVGD--AEGGTEAAEESLSGIEGVSNIEVTDV 85 (89)
T ss_dssp EECSSSCEEEEEEEEESS--SCGGGGHHHHHHTTSCSSEEEEEEEE
T ss_pred EEEEcceeeEEEEEEEEc--CCcChHHHHHHHhccCCccEEEEEEE
Confidence 444 66677888887654 56788999999999999999998543
No 59
>2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii}
Probab=27.81 E-value=80 Score=22.85 Aligned_cols=42 Identities=17% Similarity=0.297 Sum_probs=32.6
Q ss_pred eee-cCCcceEEEEeeccCCCCC-chHHHHHHhccCCCceeeEEEE
Q 030235 90 VPV-SPSDKLTMYFQADGAMNET-AIPAVTQALQGTEGISDLKVQV 133 (181)
Q Consensus 90 ~p~-~~sd~l~m~f~aegt~~e~-cV~sVTkALE~leGVsdVkVsL 133 (181)
+|+ +---+|.+++--+- .++ -+..+..++++++||.+|+|--
T Consensus 44 ~pIafGlk~L~i~~vveD--~~~~~tD~lee~i~~~e~VqSvdV~~ 87 (91)
T 2yy3_A 44 EPIAFGLVALKFYVLGRD--EEGYSFDEVAEKFEEVENVESAEVET 87 (91)
T ss_dssp EECTTSCEEEEEEEEECS--STTCCHHHHHHHHHHSTTEEEEEEEE
T ss_pred EEEEcceeeEEEEEEEEC--CCccccHHHHHHHhcCCCceEEEEEE
Confidence 344 56677888876654 446 7999999999999999999853
No 60
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=22.65 E-value=45 Score=22.74 Aligned_cols=16 Identities=13% Similarity=0.511 Sum_probs=14.3
Q ss_pred HHHHHHHHHhCCccce
Q 030235 152 AANLVEIIQGSGFKLQ 167 (181)
Q Consensus 152 assLvEAIe~aGFevq 167 (181)
.+.|++.++++||++.
T Consensus 63 ~d~l~~~L~~~g~~~~ 78 (81)
T 2fi0_A 63 MDKIVRTLEANGYEVI 78 (81)
T ss_dssp HHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHcCCEee
Confidence 3889999999999986
No 61
>1vgj_A Hypothetical protein PH0099; alpha+beta, LIGT-like, structural genomics, ligase; 1.94A {Pyrococcus horikoshii} PDB: 1vdx_A 2fyh_A
Probab=22.41 E-value=1.4e+02 Score=21.54 Aligned_cols=73 Identities=16% Similarity=0.221 Sum_probs=46.8
Q ss_pred CCcceEEEEeeccCCCCCchHHHHHHhccC-CCceeeEEEEecceEEE------------eeeccccccchHHHHHHHHH
Q 030235 94 PSDKLTMYFQADGAMNETAIPAVTQALQGT-EGISDLKVQVIEGIATV------------EKQTTVQATGVAANLVEIIQ 160 (181)
Q Consensus 94 ~sd~l~m~f~aegt~~e~cV~sVTkALE~l-eGVsdVkVsLeeG~AtV------------~kqttvqatgvassLvEAIe 160 (181)
|.+.|-+-.+-=|.+++..++.+.++|+.+ .+..-.++.+.. ...| .... ....-++..|.+++.
T Consensus 35 ~~~~lHiTL~flg~~~~~~~~~l~~~l~~~~~~~~pf~l~l~g-~g~F~~~~~p~vl~~~v~~~-~~L~~L~~~l~~~l~ 112 (184)
T 1vgj_A 35 ERENLHITLKFLGEITEEQAEEIKNILKKIAEKYKKHEVKVKG-IGVFPNPNYIRVIWAGIEND-EIIREMAREIEDELA 112 (184)
T ss_dssp CGGGCEEEEEEEESCCHHHHHHHHHHHHHHHTTSBCEEEEEEE-EEEEECSSSEEEEEEEEETC-HHHHHHHHHHHHHHH
T ss_pred CccccEEEEEeecCCCHHHHHHHHHHHHHHHccCCCeEEEEee-EeeCCCCCCCcEEEEEecCC-HHHHHHHHHHHHHHH
Confidence 445554444444668888899888888887 255677777763 3333 1121 345566778888888
Q ss_pred hCCcccee
Q 030235 161 GSGFKLQT 168 (181)
Q Consensus 161 ~aGFevqt 168 (181)
..||....
T Consensus 113 ~~g~~~~~ 120 (184)
T 1vgj_A 113 KLGFKKEG 120 (184)
T ss_dssp TTTCCCCC
T ss_pred HcCCCCCC
Confidence 88987643
No 62
>1b64_A Elongation factor 1-beta; guanine nucleotide exchange factor, G-protein, translation elongation; NMR {Homo sapiens} SCOP: d.58.12.1
Probab=20.11 E-value=1.6e+02 Score=21.24 Aligned_cols=41 Identities=17% Similarity=0.314 Sum_probs=32.8
Q ss_pred eee-cCCcceEEEEeeccCCCCCchHHHHHHhccCCC-ceeeEEE
Q 030235 90 VPV-SPSDKLTMYFQADGAMNETAIPAVTQALQGTEG-ISDLKVQ 132 (181)
Q Consensus 90 ~p~-~~sd~l~m~f~aegt~~e~cV~sVTkALE~leG-VsdVkVs 132 (181)
+|+ +---+|.+++--+- .++-+..+..++++++| |.+++|-
T Consensus 44 ~piafGikkL~i~~vveD--d~v~tD~lee~i~~~ed~VqSvdI~ 86 (91)
T 1b64_A 44 VPVGYGIKKLQIQCVVED--DKVGTDMLEEQITAFEDYVQSMDVA 86 (91)
T ss_dssp EESSSSCEEEEEEEEECT--TSSCHHHHHHHHTTCTTTEEEEEES
T ss_pred EEEEeeEEEEEEEEEEEC--CccChHHHHHHHHhccCceeEEEEE
Confidence 344 66677888887665 46889999999999999 9999874
Done!