Your job contains 1 sequence.
>030244
MRTLLSSQNPLLLFQKPSVWNLRSSFTHPTTQQSLTSHPTTSWKLHANAKGFGARNTSPP
ASLNKSASDDENNNNNNSDEDHLPQVVLERIIVRILVSVGVPLATGIASLHFFGVVKEKQ
LFDLPLWIPLVTTFLTFGLSAVGIAYGSLSSSWDAEKQGSLLGFEEAKQNWVEIWNEDDG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030244
(180 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2149644 - symbol:AT5G52780 "AT5G52780" species... 260 2.1e-22 1
TAIR|locus:1006589876 - symbol:PAM68 "AT4G19100" species:... 192 3.3e-15 1
>TAIR|locus:2149644 [details] [associations]
symbol:AT5G52780 "AT5G52780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0010155 "regulation of proton transport" evidence=RCA]
[GO:0010207 "photosystem II assembly" evidence=RCA] [GO:0046777
"protein autophosphorylation" evidence=RCA] GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009535 EMBL:AB025606
InterPro:IPR021855 Pfam:PF11947 EMBL:BT025520 EMBL:AY086617
EMBL:AK228908 IPI:IPI00545587 RefSeq:NP_200090.1 UniGene:At.29595
STRING:Q9LTD9 PRIDE:Q9LTD9 EnsemblPlants:AT5G52780.1 GeneID:835355
KEGG:ath:AT5G52780 TAIR:At5g52780 eggNOG:NOG289720
HOGENOM:HOG000006323 InParanoid:Q9LTD9 OMA:KENWVEM PhylomeDB:Q9LTD9
ProtClustDB:CLSN2916214 Genevestigator:Q9LTD9 Uniprot:Q9LTD9
Length = 168
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 66/179 (36%), Positives = 90/179 (50%)
Query: 1 MRTLLSSQNPLLLFQKPSVWNLRSSFTHPTTQQSLTSHPTTSWKLHANAKGFGARNTSP- 59
MR LL S LL S +++ +P T + P KLHA KGF + TS
Sbjct: 1 MRALLCSHR-LLPLSSLSRTTVKTKSHNPKTLYP-NNKPRWESKLHAGPKGFQSSRTSEK 58
Query: 60 PASLNKSAXXXXXXXXXXXXXXHLPQXXXXXXXXXXXXXXGVPLATGIASLHFFGVVKEK 119
P + +PQ G PL G+A L V+K++
Sbjct: 59 PGRPDPDPEDDPP----------IPQEVFERMMGRIVVSVGTPLGLGVAILKVLEVLKDR 108
Query: 120 QLFDLPLWIPLVTTFLTFGLSAVGIAYGSLSSSWDAEKQGSLLGFEEAKQNWVEIWNED 178
++D+PLW+P +TT +TFG SA+GIAYGSLS++ D K SL G +EAK+NWVE+W ED
Sbjct: 109 NVWDVPLWVPYLTTLVTFGSSALGIAYGSLSTNLDPAKTNSLFGLKEAKENWVEMWKED 167
>TAIR|locus:1006589876 [details] [associations]
symbol:PAM68 "AT4G19100" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010207 "photosystem II assembly"
evidence=RCA] [GO:0015979 "photosynthesis" evidence=RCA]
[GO:0016556 "mRNA modification" evidence=RCA] GO:GO:0016021
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL021687
EMBL:AL161550 GO:GO:0009535 GO:GO:0015979 GO:GO:0009523
UniGene:At.6 EMBL:BT029521 IPI:IPI00544605 PIR:T04431
RefSeq:NP_974571.1 UniGene:At.66600 UniGene:At.67800 STRING:O49668
PRIDE:O49668 EnsemblPlants:AT4G19100.1 GeneID:2745715
KEGG:ath:AT4G19100 TAIR:At4g19100 eggNOG:NOG150159
HOGENOM:HOG000114727 InParanoid:O49668 OMA:ISRMGFT PhylomeDB:O49668
ProtClustDB:CLSN2720641 BioCyc:MetaCyc:MONOMER-16601
Genevestigator:O49668 InterPro:IPR021855 Pfam:PF11947
Uniprot:O49668
Length = 214
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 100 GVPLATGIASLHFFGVVKEKQLFDLPLWIPLVTTFLTFGLSAVGIAYGSLSSSWDAEKQG 159
G+PL G+ FF +K D+P W+P + +F+ FG + G++YG +SSSWD ++G
Sbjct: 129 GLPLFIGLLFFPFFYYLKVGLKVDVPTWVPFIVSFVFFGTALAGVSYGIVSSSWDPLREG 188
Query: 160 SLLGFEEAKQNWVEIW 175
SLLG+ EAK+NW W
Sbjct: 189 SLLGWNEAKKNWPVFW 204
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.130 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 180 152 0.00073 105 3 11 22 0.37 32
30 0.40 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 591 (63 KB)
Total size of DFA: 159 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.13u 0.08s 12.21t Elapsed: 00:00:01
Total cpu time: 12.13u 0.08s 12.21t Elapsed: 00:00:01
Start: Fri May 10 15:37:32 2013 End: Fri May 10 15:37:33 2013