Query 030245
Match_columns 180
No_of_seqs 149 out of 1039
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 17:24:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030245.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030245hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2igv_A Peptidyl-prolyl CIS-tra 100.0 4.2E-58 1.4E-62 350.5 22.3 172 1-172 1-172 (173)
2 1a58_A Cyclophilin; isomerase, 100.0 5.8E-57 2E-61 345.3 23.4 170 3-172 6-177 (177)
3 2wfi_A Peptidyl-prolyl CIS-tra 100.0 7.4E-57 2.5E-61 345.2 23.0 169 3-171 9-179 (179)
4 2z6w_A Peptidyl-prolyl CIS-tra 100.0 1.3E-56 4.4E-61 339.9 22.4 164 1-172 1-165 (165)
5 2he9_A NK-tumor recognition pr 100.0 1.5E-56 5.2E-61 346.5 22.8 172 2-173 18-191 (192)
6 1qng_A Peptidyl-prolyl CIS-tra 100.0 1.9E-56 6.4E-61 340.5 20.4 169 2-171 2-170 (170)
7 3pmp_A Cyclophilin A; peptidyl 100.0 4.4E-56 1.5E-60 336.9 22.1 163 2-172 1-164 (164)
8 2cmt_A Peptidyl-prolyl CIS-tra 100.0 5.2E-56 1.8E-60 338.4 22.0 164 1-172 8-172 (172)
9 2poy_A Peptidyl-prolyl CIS-tra 100.0 4.3E-56 1.5E-60 342.4 21.6 169 2-170 18-186 (186)
10 2r99_A Peptidyl-prolyl CIS-tra 100.0 9.1E-56 3.1E-60 337.5 22.4 164 1-172 9-173 (173)
11 2haq_A Cyclophilin; rotamase, 100.0 2.5E-55 8.7E-60 334.3 20.3 162 1-171 9-172 (172)
12 3rdd_A Peptidyl-prolyl CIS-tra 100.0 4.5E-55 1.6E-59 336.5 21.4 165 1-172 20-184 (184)
13 3k2c_A Peptidyl-prolyl CIS-tra 100.0 1.2E-54 4E-59 336.3 22.3 165 1-172 25-191 (193)
14 1mzw_A Cyclophilin H, U-snRNP- 100.0 9.8E-55 3.4E-59 332.9 19.9 168 2-171 9-177 (177)
15 3ich_A Peptidyl-prolyl CIS-tra 100.0 2.9E-54 9.8E-59 332.9 19.7 163 3-173 15-179 (188)
16 4fru_A Cyclophilin B, peptidyl 100.0 8.8E-54 3E-58 329.9 20.2 164 3-173 12-176 (185)
17 1z81_A Cyclophilin; structural 100.0 2.6E-53 8.8E-58 335.4 20.1 168 2-171 58-229 (229)
18 2c3b_A Ppiase, cyclophilin; is 100.0 2E-52 7E-57 318.7 13.6 159 5-171 4-172 (172)
19 2ose_A Probable peptidyl-proly 100.0 1.4E-51 4.8E-56 327.3 17.4 171 2-174 13-209 (234)
20 1ihg_A Cyclophilin 40; ppiase 100.0 2.4E-50 8.3E-55 339.6 21.9 172 3-174 15-187 (370)
21 2b71_A Cyclophilin-like protei 100.0 3.4E-50 1.2E-54 311.5 17.5 157 3-175 38-196 (196)
22 2poe_A Cyclophilin-like protei 100.0 8.7E-50 3E-54 307.2 18.4 154 15-179 23-182 (185)
23 2x7k_A Peptidyl-prolyl CIS-tra 100.0 5.6E-50 1.9E-54 303.6 17.0 154 2-171 10-165 (166)
24 1w74_A Peptidyl-prolyl CIS-tra 100.0 1.5E-49 5.2E-54 306.9 19.3 162 1-171 21-191 (191)
25 2ok3_A Peptidyl-prolyl CIS-tra 100.0 1.1E-49 3.6E-54 300.9 17.4 149 15-174 7-158 (161)
26 1zkc_A Peptidyl-prolyl CIS-tra 100.0 2.6E-49 8.8E-54 306.6 19.2 150 15-175 26-178 (197)
27 2fu0_A Cyclophilin, putative; 100.0 1.8E-49 6.2E-54 299.2 17.2 153 3-171 5-159 (160)
28 2k7n_A Peptidyl-prolyl CIS-tra 100.0 3E-49 1E-53 307.3 16.5 157 2-174 10-168 (203)
29 3bo7_A Peptidyl-prolyl CIS-tra 100.0 5.1E-49 1.7E-53 306.7 17.7 157 3-175 6-176 (201)
30 2a2n_A Peptidylprolyl isomeras 100.0 1E-48 3.4E-53 299.1 14.5 146 14-170 27-175 (176)
31 2hq6_A Serologically defined c 100.0 7.2E-48 2.5E-52 296.3 15.6 155 3-174 24-182 (185)
32 1v9t_A Cyclophilin B; beta bar 100.0 1.1E-47 3.8E-52 291.3 15.5 152 2-171 3-165 (166)
33 3s6m_A Peptidyl-prolyl CIS-tra 100.0 6.8E-47 2.3E-51 287.3 15.1 152 2-171 2-167 (167)
34 1lop_A Cyclophilin A; rotamase 100.0 6.4E-47 2.2E-51 286.6 12.8 143 15-171 6-163 (164)
35 3bkp_A Cyclophilin; malaria, i 100.0 2.1E-46 7.1E-51 297.1 15.8 155 3-174 21-195 (232)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 3.4E-39 1.2E-43 269.4 5.6 137 3-151 170-344 (369)
37 3kop_A Uncharacterized protein 96.3 0.062 2.1E-06 40.2 10.7 119 6-151 22-167 (188)
38 2nnz_A Hypothetical protein; b 95.2 0.051 1.8E-06 39.8 6.4 104 8-149 32-142 (153)
39 1zx8_A Hypothetical protein TM 73.7 21 0.00071 25.2 9.2 96 18-150 22-124 (136)
40 2k9u_B Filamin-binding LIM pro 49.8 9.6 0.00033 18.8 1.6 19 108-126 2-20 (26)
41 1x7f_A Outer surface protein; 30.9 26 0.0009 29.1 2.4 51 99-150 325-376 (385)
42 2p0o_A Hypothetical protein DU 29.3 24 0.00083 29.2 2.0 52 99-151 299-351 (372)
43 3dhx_A Methionine import ATP-b 24.2 1.4E+02 0.0047 19.5 4.8 27 12-40 59-85 (106)
44 3q6c_A Probable receptor YHHM; 22.2 87 0.003 20.0 3.2 28 33-66 54-81 (83)
No 1
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=4.2e-58 Score=350.51 Aligned_cols=172 Identities=73% Similarity=1.244 Sum_probs=164.4
Q ss_pred CCCcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCC
Q 030245 1 MANPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGT 80 (180)
Q Consensus 1 ~~~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~ 80 (180)
|.||+||||++++++++|+|+||||++.||+||+||++||++++|.+..++..+|+|+.||||+|+|+|||||+..+++.
T Consensus 1 ~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~ 80 (173)
T 2igv_A 1 MSRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGT 80 (173)
T ss_dssp CCCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCC
Confidence 89999999999999999999999999999999999999999877766666777999999999999999999999877888
Q ss_pred CCCcccCCCCCCCccccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCCCCCC
Q 030245 81 GGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSRSGRTK 160 (180)
Q Consensus 81 ~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~p~ 160 (180)
++.++|+..|++|+..++|.++|+||||+.+|++++|||||+++++|+||++|+|||+|++|||||++|+++++++++|.
T Consensus 81 gg~siyg~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~ 160 (173)
T 2igv_A 81 GGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPV 160 (173)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCS
T ss_pred CCCccCCCcccCcccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEeeeeEEe
Q 030245 161 KPVVIADCGIYY 172 (180)
Q Consensus 161 ~~i~I~~cg~l~ 172 (180)
++|+|.+||+|+
T Consensus 161 ~~v~I~~~g~l~ 172 (173)
T 2igv_A 161 KDCMIADCGQLK 172 (173)
T ss_dssp SCEEEEEEEEEC
T ss_pred CCEEEEEeEEEc
Confidence 999999999986
No 2
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=5.8e-57 Score=345.34 Aligned_cols=170 Identities=58% Similarity=0.970 Sum_probs=160.2
Q ss_pred CcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcC-CCceeecCCEEEEeecCcEEEeCCCCCCCCCC
Q 030245 3 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKS-GKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTG 81 (180)
Q Consensus 3 ~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~-~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~ 81 (180)
||+|||||++++|++|+|+||||++.||+||+||++||+++++.++. ++..+|+|+.||||+|+|+|||||+..+++.+
T Consensus 6 ~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 85 (177)
T 1a58_A 6 RRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTG 85 (177)
T ss_dssp CEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSSSC
T ss_pred CcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCCCC
Confidence 89999999999999999999999999999999999999988776532 34558999999999999999999998788888
Q ss_pred CCcccCCCCCCCccccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC-CCCCC
Q 030245 82 GESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSR-SGRTK 160 (180)
Q Consensus 82 ~~~~~~~~~~~e~~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~-~~~p~ 160 (180)
+.++|+..|++|...++|+++|+||||+.+|++++|||||+++++|+||++|+|||+|++|||||++|++++++ +++|.
T Consensus 86 g~si~g~~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~~P~ 165 (177)
T 1a58_A 86 GESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPL 165 (177)
T ss_dssp CCCTTSSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBS
T ss_pred CCcccCCcccCcccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCCcCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999998 68999
Q ss_pred CCeEEeeeeEEe
Q 030245 161 KPVVIADCGIYY 172 (180)
Q Consensus 161 ~~i~I~~cg~l~ 172 (180)
++|+|.+||+|.
T Consensus 166 ~~v~I~~~G~l~ 177 (177)
T 1a58_A 166 ADVVILNCGELV 177 (177)
T ss_dssp SCEEEEEEEEEC
T ss_pred CCeEEEEeEEEC
Confidence 999999999984
No 3
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=7.4e-57 Score=345.20 Aligned_cols=169 Identities=57% Similarity=0.979 Sum_probs=160.9
Q ss_pred CcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCc-CCCceeecCCEEEEeecCcEEEeCCCCCCCCCC
Q 030245 3 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGK-SGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTG 81 (180)
Q Consensus 3 ~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~-~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~ 81 (180)
||+|||||++++|++|+|+||||++.||+||+||++||+|+++.+. .++.++|+|+.||||+|+|+||+||+..+++.+
T Consensus 9 ~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 88 (179)
T 2wfi_A 9 RPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRG 88 (179)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCCCCC
Confidence 9999999999999999999999999999999999999999887654 356789999999999999999999998778888
Q ss_pred CCcccCCCCCCCccccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC-CCCCC
Q 030245 82 GESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSR-SGRTK 160 (180)
Q Consensus 82 ~~~~~~~~~~~e~~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~-~~~p~ 160 (180)
+.++|+..+++|+..++|+++|+||||+.+|++++|||||+++++|+||++|+|||||++|||||++|++++++ +++|.
T Consensus 89 g~si~g~~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~~P~ 168 (179)
T 2wfi_A 89 GESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPF 168 (179)
T ss_dssp CCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTSCBS
T ss_pred CCcccCCcccccccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998 68999
Q ss_pred CCeEEeeeeEE
Q 030245 161 KPVVIADCGIY 171 (180)
Q Consensus 161 ~~i~I~~cg~l 171 (180)
++|+|.+||+|
T Consensus 169 ~~v~I~~~G~l 179 (179)
T 2wfi_A 169 AEVRILSCGEL 179 (179)
T ss_dssp SCEEEEEEEEC
T ss_pred CCeEEEeCeeC
Confidence 99999999986
No 4
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=1.3e-56 Score=339.91 Aligned_cols=164 Identities=70% Similarity=1.194 Sum_probs=155.7
Q ss_pred CCCcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCcee-ecCCEEEEeecCcEEEeCCCCCCCC
Q 030245 1 MANPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLH-YKGSSFHRVIPGFMCQGGDFTAGNG 79 (180)
Q Consensus 1 ~~~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~-Y~g~~f~rv~~~~~iq~G~~~~~~~ 79 (180)
|.||+|||||++++|++|+|+||||+++||++|+||++||+|++ ++ |+|+.|||++|+|+||+||+..+++
T Consensus 1 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~--------g~~Y~g~~fhRvi~~f~iQgGd~~~~~g 72 (165)
T 2z6w_A 1 MGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEK--------GFGYKGSTFHRVIPSFMCQAGDFTNHNG 72 (165)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT--------SCCSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred CCCCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCC--------CccCcCCEEEEEECCCEEEeCCccCCCC
Confidence 88999999999999999999999999999999999999997654 46 9999999999999999999987788
Q ss_pred CCCCcccCCCCCCCccccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCCCCC
Q 030245 80 TGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSRSGRT 159 (180)
Q Consensus 80 ~~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~p 159 (180)
.++.++++..+++|...++|.++|+||||+.+|++++|||||+++++++||++|+|||+|++|||||++|+++++.+++|
T Consensus 73 ~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~~~~~P 152 (165)
T 2z6w_A 73 TGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRT 152 (165)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCC
T ss_pred CCCCcccCCcccCcccccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCC
Confidence 88889999999999989999999999999999999999999999999999999999999999999999999999889999
Q ss_pred CCCeEEeeeeEEe
Q 030245 160 KKPVVIADCGIYY 172 (180)
Q Consensus 160 ~~~i~I~~cg~l~ 172 (180)
.++|+|.+||+|.
T Consensus 153 ~~~v~I~~~g~l~ 165 (165)
T 2z6w_A 153 SKKIVITDCGQLS 165 (165)
T ss_dssp SSCEEEEEEEECC
T ss_pred CCcEEEEEeEEEC
Confidence 9999999999983
No 5
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-56 Score=346.48 Aligned_cols=172 Identities=51% Similarity=0.944 Sum_probs=162.1
Q ss_pred CCcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCc-CCCceeecCCEEEEeecCcEEEeCCCCCCCCC
Q 030245 2 ANPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGK-SGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGT 80 (180)
Q Consensus 2 ~~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~-~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~ 80 (180)
.||+|||||++++|++|+|+||||++.||+||+||++||+|+++.+. .++.++|+|+.||||+|+|+|||||+..+++.
T Consensus 18 ~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~G~ 97 (192)
T 2he9_A 18 GSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGK 97 (192)
T ss_dssp -CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSS
T ss_pred CCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCCCCC
Confidence 48999999999999999999999999999999999999999887654 35678999999999999999999999877888
Q ss_pred CCCcccCCCCCCCccccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC-CCCC
Q 030245 81 GGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSR-SGRT 159 (180)
Q Consensus 81 ~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~-~~~p 159 (180)
++.++|+..|++|+..++|+++|+||||+.+|++++|||||+++++|+||++|+|||+|++|||||++|++++++ +++|
T Consensus 98 gg~siyg~~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P 177 (192)
T 2he9_A 98 GGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRP 177 (192)
T ss_dssp CCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCB
T ss_pred CCCcccCCcccCccccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCCCCCC
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999998 6899
Q ss_pred CCCeEEeeeeEEee
Q 030245 160 KKPVVIADCGIYYY 173 (180)
Q Consensus 160 ~~~i~I~~cg~l~~ 173 (180)
.++|+|.+||+|.+
T Consensus 178 ~~~v~I~~~g~l~~ 191 (192)
T 2he9_A 178 YADVRVIDCGVLAT 191 (192)
T ss_dssp SSCEEEEEEEECC-
T ss_pred cCCeEEEEeEEEcc
Confidence 99999999999864
No 6
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=1.9e-56 Score=340.51 Aligned_cols=169 Identities=66% Similarity=1.144 Sum_probs=158.8
Q ss_pred CCcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCCC
Q 030245 2 ANPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTG 81 (180)
Q Consensus 2 ~~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~ 81 (180)
.||+||||+++++++.|+|+||||+++||+||+||++||+++ ++++.++..+|+|+.||||+|+|+||+||+..+++.+
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 80 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGE-KIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSG 80 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTC-EECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccC-CcCccCccceECCCEEEEEECCCEEEcCCccCCCCCC
Confidence 489999999999999999999999999999999999999765 4444456666999999999999999999998778888
Q ss_pred CCcccCCCCCCCccccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCCCCCCC
Q 030245 82 GESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSRSGRTKK 161 (180)
Q Consensus 82 ~~~~~~~~~~~e~~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~p~~ 161 (180)
+.++|+..|++|...++|.++|+||||+.+|++++|||||+++++++||++|+|||+|++|||||++|+++++.+++|.+
T Consensus 81 g~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~~ 160 (170)
T 1qng_A 81 GESIYGRSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGAKSGYVKR 160 (170)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSS
T ss_pred CccccCCcccccccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999998899999
Q ss_pred CeEEeeeeEE
Q 030245 162 PVVIADCGIY 171 (180)
Q Consensus 162 ~i~I~~cg~l 171 (180)
+|+|.+||+|
T Consensus 161 ~v~I~~cG~l 170 (170)
T 1qng_A 161 SVVITDCGEL 170 (170)
T ss_dssp CEEEEEEEEC
T ss_pred CeEEEeceeC
Confidence 9999999986
No 7
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=4.4e-56 Score=336.85 Aligned_cols=163 Identities=60% Similarity=1.048 Sum_probs=155.7
Q ss_pred CCcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCcee-ecCCEEEEeecCcEEEeCCCCCCCCC
Q 030245 2 ANPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLH-YKGSSFHRVIPGFMCQGGDFTAGNGT 80 (180)
Q Consensus 2 ~~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~-Y~g~~f~rv~~~~~iq~G~~~~~~~~ 80 (180)
+||+|||||.+++|++|+|+||||++.||+||+||++||+|+++ + |+|+.|||++|+|++|+||+..+++.
T Consensus 1 ~~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g--------~~Y~g~~fhRvi~~f~iQgGd~~~~~g~ 72 (164)
T 3pmp_A 1 AMANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHG--------FGYKDSIFHRVIPQFMLQGGDFTRHNGT 72 (164)
T ss_dssp CCCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CSSTTCBEEEEETTTEEEECCTTTSSSS
T ss_pred CCCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCC--------CcccCCEEEEEECCCeEEeCCCCCCCCC
Confidence 69999999999999999999999999999999999999976544 5 99999999999999999998778889
Q ss_pred CCCcccCCCCCCCccccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCCCCCC
Q 030245 81 GGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSRSGRTK 160 (180)
Q Consensus 81 ~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~p~ 160 (180)
++.++++..+++|...++|.++|+||||+.+|++++|||||++++.++||++|+|||||++|||||++|+++++++++|.
T Consensus 73 gg~si~g~~~~dE~~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~~~~P~ 152 (164)
T 3pmp_A 73 GGKSIYGEKFADENFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSASGKTN 152 (164)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCS
T ss_pred CCcccCCccccccccccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEeeeeEEe
Q 030245 161 KPVVIADCGIYY 172 (180)
Q Consensus 161 ~~i~I~~cg~l~ 172 (180)
++|+|.+||+|.
T Consensus 153 ~~v~I~~cg~l~ 164 (164)
T 3pmp_A 153 ATIKITDCGTVA 164 (164)
T ss_dssp SCEEEEEEEEC-
T ss_pred cCEEEEeCeEEC
Confidence 999999999984
No 8
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=5.2e-56 Score=338.38 Aligned_cols=164 Identities=65% Similarity=1.158 Sum_probs=155.7
Q ss_pred CCCcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCcee-ecCCEEEEeecCcEEEeCCCCCCCC
Q 030245 1 MANPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLH-YKGSSFHRVIPGFMCQGGDFTAGNG 79 (180)
Q Consensus 1 ~~~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~-Y~g~~f~rv~~~~~iq~G~~~~~~~ 79 (180)
|.||+|||||++++|+.|+|+||||++.||++|+||++||++++| + |+|+.||||+|+|+|||||+..+++
T Consensus 8 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~~~G 79 (172)
T 2cmt_A 8 RNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERG--------FGYHNCCFHRVIPQFMCQGGDFVKGDG 79 (172)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CSSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred CCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCC--------ceECCCEEEEEECCCEEEcCCccCCCC
Confidence 569999999999999999999999999999999999999976543 5 9999999999999999999987788
Q ss_pred CCCCcccCCCCCCCccccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCCCCC
Q 030245 80 TGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSRSGRT 159 (180)
Q Consensus 80 ~~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~p 159 (180)
.++.++|+..|++|...++|.++|+||||+++|++++|||||+++++++||++|+|||+|++|||||++|+++++++++|
T Consensus 80 ~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~~~~~P 159 (172)
T 2cmt_A 80 TGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKV 159 (172)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCCTTCCC
T ss_pred CCCCccCCCcccccccCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCC
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEeeeeEEe
Q 030245 160 KKPVVIADCGIYY 172 (180)
Q Consensus 160 ~~~i~I~~cg~l~ 172 (180)
.++|+|.+||+|.
T Consensus 160 ~~~v~I~~~g~l~ 172 (172)
T 2cmt_A 160 KEPVIISRCGELI 172 (172)
T ss_dssp SSCEEEEEEEEEC
T ss_pred CCCEEEEEeEeEC
Confidence 9999999999984
No 9
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=4.3e-56 Score=342.37 Aligned_cols=169 Identities=69% Similarity=1.156 Sum_probs=160.6
Q ss_pred CCcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCCC
Q 030245 2 ANPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTG 81 (180)
Q Consensus 2 ~~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~ 81 (180)
.||+||||+++++|+.|+|+||||++.||++|+||++||++++|+++.++..+|+|+.||||+|+|+||+||+..+++.+
T Consensus 18 ~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G~g 97 (186)
T 2poy_A 18 GNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDGTG 97 (186)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCCCCC
Confidence 48999999999999999999999999999999999999998887766677778999999999999999999998778888
Q ss_pred CCcccCCCCCCCccccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCCCCCCC
Q 030245 82 GESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSRSGRTKK 161 (180)
Q Consensus 82 ~~~~~~~~~~~e~~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~p~~ 161 (180)
+.++|+..|++|+..++|.++|+||||+.+|++++|||||++++.|+||++|+|||+|++|||||++|+++++.+++|.+
T Consensus 98 g~si~g~~f~dE~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~P~~ 177 (186)
T 2poy_A 98 GESIYGSKFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGSQNGKPTK 177 (186)
T ss_dssp CCCTTC-CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCCSS
T ss_pred CCccCCCcccCcccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEeeeeE
Q 030245 162 PVVIADCGI 170 (180)
Q Consensus 162 ~i~I~~cg~ 170 (180)
+|+|.+||+
T Consensus 178 ~v~I~~cG~ 186 (186)
T 2poy_A 178 SVCITASGV 186 (186)
T ss_dssp CEEEEEEEC
T ss_pred CEEEEeCCC
Confidence 999999995
No 10
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=9.1e-56 Score=337.47 Aligned_cols=164 Identities=66% Similarity=1.187 Sum_probs=155.9
Q ss_pred CCCcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCcee-ecCCEEEEeecCcEEEeCCCCCCCC
Q 030245 1 MANPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLH-YKGSSFHRVIPGFMCQGGDFTAGNG 79 (180)
Q Consensus 1 ~~~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~-Y~g~~f~rv~~~~~iq~G~~~~~~~ 79 (180)
|.||+||||+++++|++|+|+||||++.||++|+||++||+++++ + |+|+.||||+|+|+|||||+..+++
T Consensus 9 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~~~g 80 (173)
T 2r99_A 9 RSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKG--------FGFKGSSFHRIIPQFMCQGGDFTNHNG 80 (173)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CCSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred cCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCC--------ceecCCEEEEeeCCCEEEeCCcCCCCC
Confidence 569999999999999999999999999999999999999987544 4 9999999999999999999987788
Q ss_pred CCCCcccCCCCCCCccccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCCCCC
Q 030245 80 TGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSRSGRT 159 (180)
Q Consensus 80 ~~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~p 159 (180)
.++.++|+..|++|...++|+++|+||||+.+|++++|||||++++.++||++|+|||+|++|||||++|+++++++++|
T Consensus 81 ~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~P 160 (173)
T 2r99_A 81 TGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKP 160 (173)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCC
T ss_pred CCCCccCCCcccCcccCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCC
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEeeeeEEe
Q 030245 160 KKPVVIADCGIYY 172 (180)
Q Consensus 160 ~~~i~I~~cg~l~ 172 (180)
.++|+|.+||+|.
T Consensus 161 ~~~v~I~~cG~l~ 173 (173)
T 2r99_A 161 KQKVIIADCGEYV 173 (173)
T ss_dssp SSCEEEEEEEECC
T ss_pred CCCeEEEEeeeEC
Confidence 9999999999974
No 11
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=2.5e-55 Score=334.27 Aligned_cols=162 Identities=58% Similarity=0.958 Sum_probs=154.0
Q ss_pred CCCcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCcee-ecCCEEEEeecCcEEEeCCCCCCCC
Q 030245 1 MANPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLH-YKGSSFHRVIPGFMCQGGDFTAGNG 79 (180)
Q Consensus 1 ~~~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~-Y~g~~f~rv~~~~~iq~G~~~~~~~ 79 (180)
|.+|+|||||++++|++|+|+||||+++||++|+||++||+|+++ + |+|+.||||+|+|+||||++..+++
T Consensus 9 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~~~g 80 (172)
T 2haq_A 9 EVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHG--------FGYKDSIFHRVIQNFMIQGGDFTNFDG 80 (172)
T ss_dssp CCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CCSTTCBCCEEETTTEEEECCTTTSSS
T ss_pred CCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCC--------cccCCCEEEEEECCCEEecCCccCCCC
Confidence 569999999999999999999999999999999999999987554 6 9999999999999999999777788
Q ss_pred CCCCcccCCCCCCCccccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC-CCC
Q 030245 80 TGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSR-SGR 158 (180)
Q Consensus 80 ~~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~-~~~ 158 (180)
.++.++|+..+++|...++|. +|+||||+.+|++++|||||+++++++||++|+|||||++|||||++|++++++ +++
T Consensus 81 ~gg~si~g~~f~dE~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~~ 159 (172)
T 2haq_A 81 TGGKSIYGEKFADENLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHDR 159 (172)
T ss_dssp SCCCCSSSSCBCCCCCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGC
T ss_pred CCCccccCCcccCcCCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCCc
Confidence 888999999999998899999 999999999999999999999999999999999999999999999999999998 569
Q ss_pred CCCCeEEeeeeEE
Q 030245 159 TKKPVVIADCGIY 171 (180)
Q Consensus 159 p~~~i~I~~cg~l 171 (180)
|.++|+|.+||+|
T Consensus 160 P~~~v~I~~~g~l 172 (172)
T 2haq_A 160 PVKPVKIVASGEL 172 (172)
T ss_dssp BSSCEEEEEEEEC
T ss_pred CCCCeEEEEeEEC
Confidence 9999999999986
No 12
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=4.5e-55 Score=336.46 Aligned_cols=165 Identities=73% Similarity=1.259 Sum_probs=156.3
Q ss_pred CCCcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCC
Q 030245 1 MANPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGT 80 (180)
Q Consensus 1 ~~~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~ 80 (180)
|.||+||||++++++++|+|+||||++.||++|+||++||++++|++ |+|+.||||+|+|+|||||+..+++.
T Consensus 20 ~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~-------Y~g~~FhRvi~~f~iQgGd~~~~~g~ 92 (184)
T 3rdd_A 20 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGT 92 (184)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCS-------STTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcc-------cCCCEEEEccCCcEEEeCCCCCCCCC
Confidence 56999999999999999999999999999999999999998765421 99999999999999999998878889
Q ss_pred CCCcccCCCCCCCccccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCCCCCC
Q 030245 81 GGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSRSGRTK 160 (180)
Q Consensus 81 ~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~p~ 160 (180)
++.++++..+++|...++|.++|+||||+.+|++++|||||++++.++||++|+|||+|++|||||++|+++++++++|.
T Consensus 93 gg~si~g~~~~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~g~P~ 172 (184)
T 3rdd_A 93 GGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTS 172 (184)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCS
T ss_pred CCcccCCCcccCcccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999899999
Q ss_pred CCeEEeeeeEEe
Q 030245 161 KPVVIADCGIYY 172 (180)
Q Consensus 161 ~~i~I~~cg~l~ 172 (180)
++|+|.+||+|+
T Consensus 173 ~~v~I~~cG~l~ 184 (184)
T 3rdd_A 173 KKITIADCGQLE 184 (184)
T ss_dssp SCEEEEEEEECC
T ss_pred CCeEEEeCeEEC
Confidence 999999999984
No 13
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=1.2e-54 Score=336.34 Aligned_cols=165 Identities=62% Similarity=1.021 Sum_probs=156.4
Q ss_pred CCCcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCC
Q 030245 1 MANPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGT 80 (180)
Q Consensus 1 ~~~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~ 80 (180)
|.||+|||||++++|++|+|+||||+++||++|+||++||++++++ .|+|+.||||+|+|+|||||+..+++.
T Consensus 25 ~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~-------~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 97 (193)
T 3k2c_A 25 EASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGE-------GYKGSTFHRIIPGFMVQGGDYTAHNGT 97 (193)
T ss_dssp -CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTS-------SSTTCBEEEEETTTEEEECCTTTSSSS
T ss_pred cCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCC-------cccCCEEEEEeCCCEEEeCCCCCCCCc
Confidence 5699999999999999999999999999999999999999775542 299999999999999999998878888
Q ss_pred CCCcccCCCCCCCccccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCCCCCC
Q 030245 81 GGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSRSGRTK 160 (180)
Q Consensus 81 ~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~p~ 160 (180)
++.++++..+++|...++|+++|+||||+.+|++++|||||+++++++||++|+|||||++|||||++|+++++++++|.
T Consensus 98 gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~g~P~ 177 (193)
T 3k2c_A 98 GGRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSESGQVK 177 (193)
T ss_dssp CCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCC
T ss_pred CCcccCCCcccccccccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCCCCcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred --CCeEEeeeeEEe
Q 030245 161 --KPVVIADCGIYY 172 (180)
Q Consensus 161 --~~i~I~~cg~l~ 172 (180)
++|+|.+||+|.
T Consensus 178 ~~~~v~I~~cG~l~ 191 (193)
T 3k2c_A 178 KGYRIEIRDCGVLG 191 (193)
T ss_dssp TTCCEEEEEEEECC
T ss_pred cCccEEEEEceEeC
Confidence 999999999986
No 14
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=9.8e-55 Score=332.86 Aligned_cols=168 Identities=58% Similarity=1.060 Sum_probs=156.7
Q ss_pred CCcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCCC
Q 030245 2 ANPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTG 81 (180)
Q Consensus 2 ~~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~ 81 (180)
.||+||||+++++|+.|+|+||||++.||+||+||++||++..+. .++..+|+|+.||||+|+|+|||||+..+++.+
T Consensus 9 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~--~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~g 86 (177)
T 1mzw_A 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRK--DGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTG 86 (177)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEE--TTEECSSTTCBCCEEETTTEEEECCTTTSSSCC
T ss_pred CCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCC--cCccceECCCEEEEEECCCEEEcCCcccCCCCC
Confidence 389999999999999999999999999999999999999776432 123445999999999999999999998788888
Q ss_pred CCcccCCCCCCCccccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC-CCCCC
Q 030245 82 GESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSR-SGRTK 160 (180)
Q Consensus 82 ~~~~~~~~~~~e~~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~-~~~p~ 160 (180)
+.++|+..|++|...++|+++|+||||+.+|++++|||||++++.|+||++|+|||||++|||||++|++++++ +++|.
T Consensus 87 g~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P~ 166 (177)
T 1mzw_A 87 VASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPK 166 (177)
T ss_dssp CCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBS
T ss_pred CCccCCCcccCcccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999996 88999
Q ss_pred CCeEEeeeeEE
Q 030245 161 KPVVIADCGIY 171 (180)
Q Consensus 161 ~~i~I~~cg~l 171 (180)
++|+|.+||+|
T Consensus 167 ~~v~I~~cG~l 177 (177)
T 1mzw_A 167 LPVVISQCGEM 177 (177)
T ss_dssp SCEEEEEEEEC
T ss_pred CCEEEEeceeC
Confidence 99999999986
No 15
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=2.9e-54 Score=332.89 Aligned_cols=163 Identities=58% Similarity=1.003 Sum_probs=154.5
Q ss_pred CcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCcee-ecCCEEEEeecCcEEEeCCCCCCCCCC
Q 030245 3 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLH-YKGSSFHRVIPGFMCQGGDFTAGNGTG 81 (180)
Q Consensus 3 ~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~-Y~g~~f~rv~~~~~iq~G~~~~~~~~~ 81 (180)
+|+|||||++++|++|+|+||||.+.||+||+||++||+|+++ + |+|+.||||+|+|+||||++..+++.+
T Consensus 15 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 86 (188)
T 3ich_A 15 TVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKG--------FGYKNSKFHRVIKDFMIQGGDFTRGDGTG 86 (188)
T ss_dssp EEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CSSTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCC--------ccccCCEEEEEECCCEEEcCCccCCCCCC
Confidence 6899999999999999999999999999999999999987544 6 999999999999999999977788888
Q ss_pred CCcccCCCCCCCccccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC-CCCCC
Q 030245 82 GESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSR-SGRTK 160 (180)
Q Consensus 82 ~~~~~~~~~~~e~~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~-~~~p~ 160 (180)
+.++|+..|++|...++|+++|+||||+.+|++++|||||+++++++||++|+|||||++|||||++|++++++ +++|.
T Consensus 87 g~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~P~ 166 (188)
T 3ich_A 87 GKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPL 166 (188)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBS
T ss_pred CccccCCcccccccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCeEC
Confidence 89999999999988999999999999999999999999999999999999999999999999999999999998 56999
Q ss_pred CCeEEeeeeEEee
Q 030245 161 KPVVIADCGIYYY 173 (180)
Q Consensus 161 ~~i~I~~cg~l~~ 173 (180)
++|+|.+|++|..
T Consensus 167 ~~v~I~~~~~l~~ 179 (188)
T 3ich_A 167 KDVIIADCGKIEV 179 (188)
T ss_dssp SCEEEEEEEEEEE
T ss_pred CCEEEEEeEEEec
Confidence 9999999999943
No 16
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=8.8e-54 Score=329.90 Aligned_cols=164 Identities=58% Similarity=0.992 Sum_probs=155.8
Q ss_pred CcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCCCC
Q 030245 3 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGG 82 (180)
Q Consensus 3 ~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~ 82 (180)
+|+|||||+++++++|+|+||||++.||++|+||++||++++| .+|+|+.|||++|+|+||||++..+++.++
T Consensus 12 ~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g-------~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg 84 (185)
T 4fru_A 12 TVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKG-------FGYKDSKFHRVIKDFMIQGGDFTRGDGTGG 84 (185)
T ss_dssp EEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTS-------CCSTTCBCCEEETTTEEEECCTTTSSSSCC
T ss_pred CcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCC-------CeEcCCEEEEeeCCCeEEECCCCCCCCCCC
Confidence 7899999999999999999999999999999999999976543 169999999999999999999987888999
Q ss_pred CcccCCCCCCCccccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC-CCCCCC
Q 030245 83 ESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSR-SGRTKK 161 (180)
Q Consensus 83 ~~~~~~~~~~e~~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~-~~~p~~ 161 (180)
.++++..+++|...++|+++|+||||+.++++++|||||++++.++||++|+|||||++|||||++|++++++ +++|.+
T Consensus 85 ~si~g~~f~de~~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~ 164 (185)
T 4fru_A 85 KSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRDKPLK 164 (185)
T ss_dssp CBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSS
T ss_pred ccccCCccCccccccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCCcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998 689999
Q ss_pred CeEEeeeeEEee
Q 030245 162 PVVIADCGIYYY 173 (180)
Q Consensus 162 ~i~I~~cg~l~~ 173 (180)
+|+|.+||+|..
T Consensus 165 ~v~I~~~g~l~~ 176 (185)
T 4fru_A 165 DVTIADCGKIEV 176 (185)
T ss_dssp CEEEEEEEEEEE
T ss_pred CEEEEEceEEec
Confidence 999999999963
No 17
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=2.6e-53 Score=335.45 Aligned_cols=168 Identities=49% Similarity=0.911 Sum_probs=157.7
Q ss_pred CCcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCCC
Q 030245 2 ANPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTG 81 (180)
Q Consensus 2 ~~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~ 81 (180)
.||+||||+++++|++|+|+||||++.||+||+||++||++.++.+ ++..+|+|+.||||+|+|+|||||+..+++.+
T Consensus 58 ~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~--g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~G 135 (229)
T 1z81_A 58 SNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVN--NLPVGYKNTIFHRVIKEFMIQGGDFINHNGSG 135 (229)
T ss_dssp TCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSS--SSBCSSTTEECCEEETTTEEEECCTTTSSSCC
T ss_pred CCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCc--CCCceECCCEEEEEeCCCEEEcCCCcCCCCCC
Confidence 3899999999999999999999999999999999999998776432 34558999999999999999999998788889
Q ss_pred CCcccCCCCCCCccccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEE--cCHHHHHHHHhCCCCC--C
Q 030245 82 GESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVV--EGMNVVKAIEKMGSRS--G 157 (180)
Q Consensus 82 ~~~~~~~~~~~e~~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi--~G~~vl~~I~~~~~~~--~ 157 (180)
+.++|+..|++|+..++|+++|+||||+.+|++++|||||++++.++||++|+|||||+ +|||||++|++++++. +
T Consensus 136 g~siyg~~f~dE~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~~ 215 (229)
T 1z81_A 136 SLSIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYIY 215 (229)
T ss_dssp CCBTTBSCCCCCCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTTC
T ss_pred CCccCCCcccccccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999 9999999999999984 8
Q ss_pred CCCCCeEEeeeeEE
Q 030245 158 RTKKPVVIADCGIY 171 (180)
Q Consensus 158 ~p~~~i~I~~cg~l 171 (180)
+|.++|+|.+||+|
T Consensus 216 ~P~~~V~I~~cG~l 229 (229)
T 1z81_A 216 KPKIPINVVECGEL 229 (229)
T ss_dssp CBSSCEEEEEEEEC
T ss_pred CCCCCeEEEeCeeC
Confidence 99999999999986
No 18
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=2e-52 Score=318.68 Aligned_cols=159 Identities=60% Similarity=1.056 Sum_probs=121.0
Q ss_pred EEEEEEEEC--C---EEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCcee-ecCCEEEEeecCcEEEeCCCCCCC
Q 030245 5 KVFFDMTVG--G---QPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLH-YKGSSFHRVIPGFMCQGGDFTAGN 78 (180)
Q Consensus 5 ~v~~di~~~--~---t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~-Y~g~~f~rv~~~~~iq~G~~~~~~ 78 (180)
+|||||+++ + |++|+|+||||++.||++|+||++||+|+++ + |+|+.||||+|+|+||+|++..++
T Consensus 4 ~vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g--------~~Y~g~~fhRvi~~f~iQgGd~~~~~ 75 (172)
T 2c3b_A 4 QVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAG--------EGYRESTFHRIIPNFMIQGGDFTRGN 75 (172)
T ss_dssp CEEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTT--------TSSTTCBCCEEETTTEEEECC-----
T ss_pred EEEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCCC--------cccCCCEEEEEeCCCEEEeCCcCCCC
Confidence 799999998 5 5669999999999999999999999987654 4 999999999999999999976678
Q ss_pred CCCCCcccCCCCCCCccccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEc--CHHHHHHHHhCCCCC
Q 030245 79 GTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVE--GMNVVKAIEKMGSRS 156 (180)
Q Consensus 79 ~~~~~~~~~~~~~~e~~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~--G~~vl~~I~~~~~~~ 156 (180)
+.++.++|+..+++|...++|+++|+||||+.+|++++|||||+++++|+||++|+|||||++ |||||++|++++++.
T Consensus 76 g~gg~si~g~~f~dE~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~~ 155 (172)
T 2c3b_A 76 GTGGRSIYGDKFADENFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSS 155 (172)
T ss_dssp -----------------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCTT
T ss_pred CCCCcccCCCcccCcccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCCC
Confidence 888889999999999889999999999999999999999999999999999999999999999 999999999999985
Q ss_pred C--CCCCCeEEeeeeEE
Q 030245 157 G--RTKKPVVIADCGIY 171 (180)
Q Consensus 157 ~--~p~~~i~I~~cg~l 171 (180)
+ +|.++|+|.+||+|
T Consensus 156 ~~~~P~~~v~I~~cG~l 172 (172)
T 2c3b_A 156 GSVRSNTRPKIVNCGEL 172 (172)
T ss_dssp SCCCSSSCCEEEEEEEC
T ss_pred CCccCCCCeEEEeCeeC
Confidence 5 99999999999986
No 19
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=1.4e-51 Score=327.31 Aligned_cols=171 Identities=31% Similarity=0.557 Sum_probs=148.6
Q ss_pred CCcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcC---CCc----e--e-ecCCEEEEeecCcEEEe
Q 030245 2 ANPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKS---GKP----L--H-YKGSSFHRVIPGFMCQG 71 (180)
Q Consensus 2 ~~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~---~~~----~--~-Y~g~~f~rv~~~~~iq~ 71 (180)
.||+|||||.+++|++|+|+||||.+.||+||+||++||++++.+..+ ++. + + |+|+.||||+|+|+|||
T Consensus 13 ~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQg 92 (234)
T 2ose_A 13 KNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIVS 92 (234)
T ss_dssp SSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEEEE
T ss_pred CCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEEEc
Confidence 489999999999999999999999999999999999999876221100 011 3 5 99999999999999999
Q ss_pred CCCCCCCCCCCCcccCCC-----CCCCccccCCCCceEEEeee----cCCCCCCccEEEEcCC------CCCCCCCccEE
Q 030245 72 GDFTAGNGTGGESIYGSK-----FADENFVKKHTGPGILSMAN----AGPGTNGSQFFISAGK------TEWLDGKHVAF 136 (180)
Q Consensus 72 G~~~~~~~~~~~~~~~~~-----~~~e~~~~~~~~~G~vs~~~----~g~~~~~sqFfI~l~~------~~~ld~~~~vf 136 (180)
||+..+++.++.++|+.. |+ .+.++|.++|+||||+ .+|++++|||||++++ .++||++|+||
T Consensus 93 Gd~~~g~G~Gg~siyg~~~~p~~f~--~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~tVF 170 (234)
T 2ose_A 93 GDIYNSNGSSAGTVYCDEPIPPVFG--DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQVVI 170 (234)
T ss_dssp CCCC----CCCCCTTTTCCBCCCCC--SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSEEE
T ss_pred CCccCCCCCCCccccCCccCccccc--CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCeeEE
Confidence 997778888888888876 65 4588999999999999 8999999999999999 89999999999
Q ss_pred EEEEcCHHHHHHHHhCCCC-CCCCCCCeEEeeeeEEeeC
Q 030245 137 GQVVEGMNVVKAIEKMGSR-SGRTKKPVVIADCGIYYYV 174 (180)
Q Consensus 137 G~Vi~G~~vl~~I~~~~~~-~~~p~~~i~I~~cg~l~~~ 174 (180)
|+|++|||||++|++++++ +++|.++|+|.+|+++.++
T Consensus 171 G~Vv~GmdVv~~I~~~~t~~~~~P~~~V~I~~~~~l~~p 209 (234)
T 2ose_A 171 GQVYGGLDVLDKINSMIKPYAGRKYPTFSIGKCGAYLDS 209 (234)
T ss_dssp EEEEECHHHHHHHHHHTCCCTTCCCCCEEEEEEEECCCH
T ss_pred EEEeCCHHHHHHHHhCCcCCCCCccCCEEEEEEEEecCC
Confidence 9999999999999999998 5999999999999999865
No 20
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=2.4e-50 Score=339.58 Aligned_cols=172 Identities=63% Similarity=1.060 Sum_probs=162.7
Q ss_pred CcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcC-CCceeecCCEEEEeecCcEEEeCCCCCCCCCC
Q 030245 3 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKS-GKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTG 81 (180)
Q Consensus 3 ~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~-~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~ 81 (180)
||+||||+++++++.|+|+||||++.||+||+||++||+++++.+.. ++..+|+|+.||||+|+|+|||||+..+++++
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g 94 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG 94 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCC
Confidence 89999999999999999999999999999999999999998877543 44558999999999999999999998788999
Q ss_pred CCcccCCCCCCCccccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCCCCCCC
Q 030245 82 GESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSRSGRTKK 161 (180)
Q Consensus 82 ~~~~~~~~~~~e~~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~p~~ 161 (180)
+.++++..|++|+..++|+++|+|||++.+|+++||||||++++.|+||++|+|||+|++||+||++|++.+++.++|..
T Consensus 95 ~~~~~~~~~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~~~P~~ 174 (370)
T 1ihg_A 95 GESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPAK 174 (370)
T ss_dssp CCBTTBSCBCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEETTEESS
T ss_pred CCCCCCCCcCCCcCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCCCccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred CeEEeeeeEEeeC
Q 030245 162 PVVIADCGIYYYV 174 (180)
Q Consensus 162 ~i~I~~cg~l~~~ 174 (180)
+|+|.+|+++.++
T Consensus 175 ~v~I~~~g~l~~~ 187 (370)
T 1ihg_A 175 LCVIAECGELKEG 187 (370)
T ss_dssp CEEEEEEEEECTT
T ss_pred eEEEEEEEEeccC
Confidence 9999999999754
No 21
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=3.4e-50 Score=311.47 Aligned_cols=157 Identities=39% Similarity=0.617 Sum_probs=143.6
Q ss_pred CcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCCCC
Q 030245 3 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGG 82 (180)
Q Consensus 3 ~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~ 82 (180)
+++|.|+ |++|+|+||||+++||++|+||++|| +.++|+|+.||||+|+|+||||++. +++.++
T Consensus 38 ~~~V~l~-----T~~G~I~ieL~~~~aP~tv~NF~~L~----------~~g~Y~g~~FhRVi~~f~iQgGd~~-~~g~gg 101 (196)
T 2b71_A 38 RGYITIY-----TNLGDFEVELYWYHSPKTCLNFYTLC----------EMGFYDNTIFHRVIPNFVIQGGDPT-GTGKGG 101 (196)
T ss_dssp SCEEEEE-----ETTEEEEEEECTTTSHHHHHHHHHHH----------HTTTTTTEEEEEEETTTEEEEEETT-SSSSCC
T ss_pred CcEEEEE-----eCCCCEEEEEeCCCCcHHHHHHHHHh----------hcCCcCCCEEEEEeCCcEEEcCCCC-CCCCCC
Confidence 6788888 89999999999999999999999999 4568999999999999999999986 678888
Q ss_pred CcccCCCCCCCc-cccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC-CCCCC
Q 030245 83 ESIYGSKFADEN-FVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSR-SGRTK 160 (180)
Q Consensus 83 ~~~~~~~~~~e~-~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~-~~~p~ 160 (180)
.++++..+++|. ..++|+++|+||||+.+|++++|||||+++++++||++|+|||||++||+||++|++++++ +++|.
T Consensus 102 ~si~g~~~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~ 181 (196)
T 2b71_A 102 KSIYGEYFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNKPI 181 (196)
T ss_dssp CBTTBSCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCCBS
T ss_pred CccCCCcccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCCCC
Confidence 889999999996 4789999999999999999999999999999999999999999999999999999999998 68999
Q ss_pred CCeEEeeeeEEeeCC
Q 030245 161 KPVVIADCGIYYYVG 175 (180)
Q Consensus 161 ~~i~I~~cg~l~~~~ 175 (180)
++|+|.+|.++.+|+
T Consensus 182 ~~i~I~~~~i~~dP~ 196 (196)
T 2b71_A 182 FDLKILRTSTAVNAD 196 (196)
T ss_dssp SCCEEEEEEC-----
T ss_pred CCeEEEEEEEecCCC
Confidence 999999999998874
No 22
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=8.7e-50 Score=307.15 Aligned_cols=154 Identities=40% Similarity=0.627 Sum_probs=141.4
Q ss_pred EEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCCCCCcccCCCCCCCc
Q 030245 15 QPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGSKFADEN 94 (180)
Q Consensus 15 t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 94 (180)
|++|+|+||||+++||++|+||++|| +.++|+|+.||||+|+|+||||++. +++.++.++|+..+++|.
T Consensus 23 t~~G~i~ieL~~~~aP~t~~NF~~L~----------~~g~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~ 91 (185)
T 2poe_A 23 TNYGDLKFELFCSQCPKACKNFLALS----------ASGYYKNTIFHKNIKGFIIQGGDPT-GTGKGGESIYGRYFDDEI 91 (185)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHH----------HTTTTTTEEEEEECTTSEEEEEETT-SSSSCCCBTTBSCBCCCC
T ss_pred ecCccEEEEEeCCCCcHHHHHHHHHh----------ccCCCCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCCcccccc
Confidence 89999999999999999999999999 4568999999999999999999987 677888889999999998
Q ss_pred -cccCCCCceEEEeeecC----CCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC-CCCCCCCeEEeee
Q 030245 95 -FVKKHTGPGILSMANAG----PGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSR-SGRTKKPVVIADC 168 (180)
Q Consensus 95 -~~~~~~~~G~vs~~~~g----~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~-~~~p~~~i~I~~c 168 (180)
..++|+++|+||||+.+ |++++|||||+++++++||++|+|||+|++||+||++|++++++ +++|.++|+|.+|
T Consensus 92 ~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~ 171 (185)
T 2poe_A 92 YPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKDI 171 (185)
T ss_dssp CTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSCBSSCCEEEEE
T ss_pred cCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCcCCCeEEEEE
Confidence 68899999999999999 99999999999999999999999999999999999999999998 6899999999999
Q ss_pred eEEeeCCCCCC
Q 030245 169 GIYYYVGVSKD 179 (180)
Q Consensus 169 g~l~~~~~~~~ 179 (180)
+++.+|=.+.|
T Consensus 172 ~i~~dPf~d~~ 182 (185)
T 2poe_A 172 VIHSNPIADQE 182 (185)
T ss_dssp EEECCC-----
T ss_pred EEECCCCCCcc
Confidence 99987654443
No 23
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=5.6e-50 Score=303.62 Aligned_cols=154 Identities=45% Similarity=0.791 Sum_probs=145.0
Q ss_pred CCcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCCC
Q 030245 2 ANPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTG 81 (180)
Q Consensus 2 ~~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~ 81 (180)
.+++|.|+ |++|+|+||||++.||++|+||++|| +.++|+|+.||||+|+|+|||||+. +++.+
T Consensus 10 ~~~~v~l~-----t~~G~i~ieL~~~~aP~t~~NF~~L~----------~~g~Y~g~~fhRvi~~f~iQgGd~~-~~g~g 73 (166)
T 2x7k_A 10 QPPNVYLE-----TSMGIIVLELYWKHAPKTCKNFAELA----------RRGYYNGTKFHRIIKDFMIQGGDPT-GTGRG 73 (166)
T ss_dssp CCSEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHH----------HHTTTTTEECCEEETTTEEEECCTT-SSSSC
T ss_pred CCCEEEEE-----eCCCcEEEEEccCCCCHHHHHHHHHH----------hcCCCCCCEEEEEECCCEEEcCCCC-CCCCC
Confidence 47889998 89999999999999999999999999 5568999999999999999999986 67788
Q ss_pred CCcccCCCCCCCcc-ccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC-CCCC
Q 030245 82 GESIYGSKFADENF-VKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSR-SGRT 159 (180)
Q Consensus 82 ~~~~~~~~~~~e~~-~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~-~~~p 159 (180)
+.++++..+++|.. .++|.++|+||||+.+|++++|||||+++++++||++|+|||+|++|||||++|++++++ +++|
T Consensus 74 g~si~g~~~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P 153 (166)
T 2x7k_A 74 GASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRP 153 (166)
T ss_dssp CCCTTSSCBCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSCB
T ss_pred CCccCCCccccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCc
Confidence 88999999999985 889999999999999999999999999999999999999999999999999999999998 5799
Q ss_pred CCCeEEeeeeEE
Q 030245 160 KKPVVIADCGIY 171 (180)
Q Consensus 160 ~~~i~I~~cg~l 171 (180)
.++|+|.+|.++
T Consensus 154 ~~~i~I~~~~i~ 165 (166)
T 2x7k_A 154 VDDVKIIKAYPS 165 (166)
T ss_dssp SSCCEEEEEEEC
T ss_pred CCCeEEEEEEEe
Confidence 999999999986
No 24
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=1.5e-49 Score=306.87 Aligned_cols=162 Identities=45% Similarity=0.718 Sum_probs=144.9
Q ss_pred CCCcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcC-----CCceeecCCEEEEeecCcEEEeCCCC
Q 030245 1 MANPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKS-----GKPLHYKGSSFHRVIPGFMCQGGDFT 75 (180)
Q Consensus 1 ~~~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~-----~~~~~Y~g~~f~rv~~~~~iq~G~~~ 75 (180)
|.+++|.|+ |+.|+|+||||+++||++|+||++||+|+++.... .+.++|+|+.||||+|+|+|||||+.
T Consensus 21 ~~~~~v~l~-----t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~ 95 (191)
T 1w74_A 21 LATATATLH-----TNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPT 95 (191)
T ss_dssp CCSEEEEEE-----ETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTT
T ss_pred CCCeEEEEE-----ecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCC
Confidence 346777777 89999999999999999999999999998875321 13579999999999999999999975
Q ss_pred CCCCCCCCcccCCCCCCCc-cccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEc--CHHHHHHHHhC
Q 030245 76 AGNGTGGESIYGSKFADEN-FVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVE--GMNVVKAIEKM 152 (180)
Q Consensus 76 ~~~~~~~~~~~~~~~~~e~-~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~--G~~vl~~I~~~ 152 (180)
+++.++ ++..|++|. ..++|+++|+||||+.+|++++|||||++++.|+||++|+|||||++ ||+||++|+++
T Consensus 96 -g~G~gg---~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~ 171 (191)
T 1w74_A 96 -GTGRGG---PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKT 171 (191)
T ss_dssp -SSSSCC---SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTS
T ss_pred -CCCCCC---CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcC
Confidence 455554 577899995 58999999999999999999999999999999999999999999999 99999999999
Q ss_pred CCC-CCCCCCCeEEeeeeEE
Q 030245 153 GSR-SGRTKKPVVIADCGIY 171 (180)
Q Consensus 153 ~~~-~~~p~~~i~I~~cg~l 171 (180)
+++ +++|.++|+|.+|+++
T Consensus 172 ~t~~~~~P~~~v~I~~~~i~ 191 (191)
T 1w74_A 172 ATDGNDRPTDPVVIESITIS 191 (191)
T ss_dssp CBCTTSCBSSCCEEEEEEEC
T ss_pred CcCCCCCcCCCeEEEEEEEC
Confidence 997 6899999999999984
No 25
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=1.1e-49 Score=300.93 Aligned_cols=149 Identities=47% Similarity=0.730 Sum_probs=140.7
Q ss_pred EEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCCCCCcccCCCCCCCc
Q 030245 15 QPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGSKFADEN 94 (180)
Q Consensus 15 t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 94 (180)
|+.|+|+||||+++||++|+||++|| +.++|+|+.|||++|+|++|||++. +++.++.++++..+++|.
T Consensus 7 T~~G~i~ieL~~~~aP~t~~NF~~L~----------~~g~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~ 75 (161)
T 2ok3_A 7 TDVGDIKIEVFCERTPKTCENFLALC----------ASNYYNGCIFHRNIKGFMVQTGDPT-GTGRGGNSIWGKKFEDEY 75 (161)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHH----------HTTTTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCC
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHh----------hhcccCCCEEEEEECCCEEecCCCC-CCCCCCCcccCCcccccc
Confidence 89999999999999999999999999 4458999999999999999999987 667888889999999998
Q ss_pred c-ccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC-C-CCCCCCeEEeeeeEE
Q 030245 95 F-VKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSR-S-GRTKKPVVIADCGIY 171 (180)
Q Consensus 95 ~-~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~-~-~~p~~~i~I~~cg~l 171 (180)
. .++|+++|+||||+.+|++++|||||+++++++||++|+|||||++|||||++|++++++ + ++|.++|+|.+|.++
T Consensus 76 ~~~l~h~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~~i~ 155 (161)
T 2ok3_A 76 SEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIH 155 (161)
T ss_dssp CTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEEEEE
T ss_pred CcCcCcCCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEEEEe
Confidence 6 789999999999999999999999999999999999999999999999999999999998 4 899999999999999
Q ss_pred eeC
Q 030245 172 YYV 174 (180)
Q Consensus 172 ~~~ 174 (180)
.+|
T Consensus 156 ~~P 158 (161)
T 2ok3_A 156 ANP 158 (161)
T ss_dssp CCS
T ss_pred cCC
Confidence 865
No 26
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=2.6e-49 Score=306.61 Aligned_cols=150 Identities=47% Similarity=0.746 Sum_probs=141.3
Q ss_pred EEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCCCCCcccCCCCCCCc
Q 030245 15 QPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGSKFADEN 94 (180)
Q Consensus 15 t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 94 (180)
|+.|+|+||||+++||++|+||++|| +.++|+|+.||||+|+|+|||||+. +++.++.++++..|++|.
T Consensus 26 T~~G~I~ieL~~~~aP~tv~NF~~L~----------~~g~Ydg~~FhRVi~~f~iQgGd~~-~~g~Gg~si~g~~f~dE~ 94 (197)
T 1zkc_A 26 TNKGDLNLELHCDLTPKTCENFIRLC----------KKHYYDGTIFHRSIRNFVIQGGDPT-GTGTGGESYWGKPFKDEF 94 (197)
T ss_dssp ETTEEEEEEECTTTSHHHHHHHHHHH----------HTTTTTTEEEEEEETTTEEEECCTT-SSSSCCCBTTBSCBCCCC
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHH----------hcCCCCCCEEEEEeCCCEEEcCCCC-CCCCCCCccCCCcccccc
Confidence 88999999999999999999999999 4568999999999999999999986 678888899999999995
Q ss_pred -cccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCCC--CCCCCCeEEeeeeEE
Q 030245 95 -FVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSRS--GRTKKPVVIADCGIY 171 (180)
Q Consensus 95 -~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~--~~p~~~i~I~~cg~l 171 (180)
..++|+++|+||||+.+|++++|||||+++++++||++|+|||+|++|||||++|++++++. ++|.++|+|.+|+++
T Consensus 95 ~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~i~I~~~~v~ 174 (197)
T 1zkc_A 95 RPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVF 174 (197)
T ss_dssp CTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCBSSCCEEEEEEEE
T ss_pred CcCcCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCcCCCeEEEEEEEE
Confidence 68899999999999999999999999999999999999999999999999999999999984 899999999999999
Q ss_pred eeCC
Q 030245 172 YYVG 175 (180)
Q Consensus 172 ~~~~ 175 (180)
.+|-
T Consensus 175 ~dPf 178 (197)
T 1zkc_A 175 VDPY 178 (197)
T ss_dssp ECTT
T ss_pred cCCc
Confidence 8763
No 27
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=1.8e-49 Score=299.17 Aligned_cols=153 Identities=41% Similarity=0.642 Sum_probs=143.0
Q ss_pred CcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCCCC
Q 030245 3 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGG 82 (180)
Q Consensus 3 ~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~ 82 (180)
.+.|.|+ |+.|+|+||||+++||++|+||++|| +.++|+|+.|||++|+|+||||++. +++.++
T Consensus 5 ~~~v~~~-----T~~G~i~ieL~~~~aP~t~~NF~~L~----------~~g~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg 68 (160)
T 2fu0_A 5 PKSAIIY-----TTMGDIHISLFYKECKKTVQNFSVHS----------INGYYNNCIFHRVIKHFMVQTGDPS-GDGTGG 68 (160)
T ss_dssp CCEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHH----------HTTTTTTCBCCEEETTTEEEECCTT-SSSSCC
T ss_pred CCEEEEE-----ecCccEEEEEeCCCChHHHHHHHHHh----------ccCccCCCEEEEEECCCEEEeCCcC-CCCCCC
Confidence 4566666 89999999999999999999999999 5568999999999999999999985 677888
Q ss_pred CcccCCCCCCCcc-ccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC-CCCCC
Q 030245 83 ESIYGSKFADENF-VKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSR-SGRTK 160 (180)
Q Consensus 83 ~~~~~~~~~~e~~-~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~-~~~p~ 160 (180)
.++|+..+++|.. .++|.++|+||||+.+|++++|||||+++++|+||++|+|||||++|||||++|++++++ +++|.
T Consensus 69 ~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~ 148 (160)
T 2fu0_A 69 ESIWGNEFEDEFFDHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPL 148 (160)
T ss_dssp CCTTSSCBCCCCBTTBCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBS
T ss_pred CcccCCCccccccCCcccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCcC
Confidence 8899999999988 689999999999999999999999999999999999999999999999999999999998 78999
Q ss_pred CCeEEeeeeEE
Q 030245 161 KPVVIADCGIY 171 (180)
Q Consensus 161 ~~i~I~~cg~l 171 (180)
++|+|.+|.++
T Consensus 149 ~~v~I~~~~v~ 159 (160)
T 2fu0_A 149 EDIKILNIKIN 159 (160)
T ss_dssp SCCBEEEEEEC
T ss_pred CCeEEEEEEEe
Confidence 99999999986
No 28
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=3e-49 Score=307.29 Aligned_cols=157 Identities=45% Similarity=0.752 Sum_probs=146.9
Q ss_pred CCcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCCC
Q 030245 2 ANPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTG 81 (180)
Q Consensus 2 ~~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~ 81 (180)
.+++|.|+ |++|+|+||||+++||++|+||++|| +.++|+++.||||+|+|+||+|++. +++.+
T Consensus 10 ~~~~V~l~-----T~~G~I~ieL~~d~aP~tv~NF~~L~----------~~g~Ydg~~FhRVi~~F~iQgGd~~-~~g~g 73 (203)
T 2k7n_A 10 QPPNVYLE-----TSMGIIVLELYWKHAPKTCKNFAELA----------RRGYYNGTKFHRIIKDFMIQGGDPT-GTGRG 73 (203)
T ss_dssp CCSEEEEE-----ESSCEEEEEECTTTCTTHHHHHHHHH----------HHTCGGGCEEEEEETTTEEEEECSS-SSSSC
T ss_pred CCCEEEEE-----eCCCcEEEEEccCCCcHHHHHHHHHH----------hcCccCCCEEEEEeCCcEEEcCCCC-CCCCC
Confidence 47899998 88999999999999999999999999 5568999999999999999999986 56778
Q ss_pred CCcccCCCCCCCcc-ccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC-CCCC
Q 030245 82 GESIYGSKFADENF-VKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSR-SGRT 159 (180)
Q Consensus 82 ~~~~~~~~~~~e~~-~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~-~~~p 159 (180)
+.++++..|++|.. .++|.++|+||||+.+|++++|||||+++++++||++|+|||||++|||||++|++++++ +++|
T Consensus 74 g~si~g~~f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~P 153 (203)
T 2k7n_A 74 GASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRP 153 (203)
T ss_dssp CCTTSCSCBCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTEE
T ss_pred CCccCCCcccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCc
Confidence 88899999999985 889999999999999999999999999999999999999999999999999999999988 6899
Q ss_pred CCCeEEeeeeEEeeC
Q 030245 160 KKPVVIADCGIYYYV 174 (180)
Q Consensus 160 ~~~i~I~~cg~l~~~ 174 (180)
.++|+|.+|+++...
T Consensus 154 ~~~V~I~~~~v~~~~ 168 (203)
T 2k7n_A 154 VDDVKIIKAYPSGGG 168 (203)
T ss_dssp CCCCBEEEEEECCCC
T ss_pred CCCeEEEEEEEEecC
Confidence 999999999998753
No 29
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=5.1e-49 Score=306.73 Aligned_cols=157 Identities=33% Similarity=0.509 Sum_probs=139.1
Q ss_pred CcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeC-----CCCCC
Q 030245 3 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGG-----DFTAG 77 (180)
Q Consensus 3 ~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G-----~~~~~ 77 (180)
+.+|.|+ |+.|+|+||||+++||+||+||++|| +.++|+|+.||||+|+|+|||| |+. +
T Consensus 6 ~~~v~l~-----T~~G~i~ieL~~~~aP~t~~NF~~L~----------~~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp~-~ 69 (201)
T 3bo7_A 6 KGYLRIV-----TTQGSLNIELHADMAPRACDSFLRLC----------AVKYFDDTIFHRCIRNFMIQGGRAELRQPS-K 69 (201)
T ss_dssp CEEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHH----------HTTTTTTCBEEEEETTTEEEECCGGGCCC---
T ss_pred ceEEEEE-----eCCCCEEEEEcCCCCcHHHHHHHHHH----------hcCccCCCEEEEeeCCCEEEcCcccccCCC-C
Confidence 4455565 88999999999999999999999999 4568999999999999999999 876 5
Q ss_pred CCCCCCccc-------CCCCCCCc-cccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHH
Q 030245 78 NGTGGESIY-------GSKFADEN-FVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAI 149 (180)
Q Consensus 78 ~~~~~~~~~-------~~~~~~e~-~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I 149 (180)
++.++.++| +..|++|. ..++|+++|+||||+++|++++|||||+++++++||++|+|||+|++|||||++|
T Consensus 70 ~g~gg~si~~~~~~~~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I 149 (201)
T 3bo7_A 70 KKEVQQSPRSISGFPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQW 149 (201)
T ss_dssp -----CCSSCCCSSTTCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHH
T ss_pred CCCCCccccccccccCCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHH
Confidence 677788888 78899995 6889999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCC-CCCCCCCeEEeeeeEEeeCC
Q 030245 150 EKMGSR-SGRTKKPVVIADCGIYYYVG 175 (180)
Q Consensus 150 ~~~~~~-~~~p~~~i~I~~cg~l~~~~ 175 (180)
++++++ +++|.++|+|.+|+++.+|=
T Consensus 150 ~~~~t~~~~~P~~~i~I~~~~v~~dPf 176 (201)
T 3bo7_A 150 EKLETDKKDKPLKPPKVEEIIVFKNPF 176 (201)
T ss_dssp TTCCBCTTSCBSSCCBEEEEEEEECCC
T ss_pred HhCCcCCCCCcCCCeEEEEEEEEcCCc
Confidence 999998 68999999999999998763
No 30
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1e-48 Score=299.07 Aligned_cols=146 Identities=45% Similarity=0.731 Sum_probs=138.0
Q ss_pred CEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCCCCCcccCCCCCCC
Q 030245 14 GQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGSKFADE 93 (180)
Q Consensus 14 ~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e 93 (180)
.|++|+|+||||+++||++|+||++|| +.++|+|+.||||+|+|+|||||+. +++.++.++|+..+++|
T Consensus 27 ~t~~G~i~ieL~~~~aP~t~~NF~~L~----------~~g~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE 95 (176)
T 2a2n_A 27 HTSMGDIHTKLFPVECPKTVENFCVHS----------RNGYYNGHTFHRIIKGFMIQTGDPT-GTGMGGESIWGGEFEDE 95 (176)
T ss_dssp EETTEEEEEEECTTTCHHHHHHHHHHH----------HTTTTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCC
T ss_pred EecCccEEEEEeCCCChHHHHHHHHHh----------hcCccCCCEEEEEECCcEEEccCCC-CCCCCCCcccCCccccc
Confidence 389999999999999999999999999 4568999999999999999999986 67788889999999999
Q ss_pred cc-ccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHHHHHHhCCCC--CCCCCCCeEEeeeeE
Q 030245 94 NF-VKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVVKAIEKMGSR--SGRTKKPVVIADCGI 170 (180)
Q Consensus 94 ~~-~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~--~~~p~~~i~I~~cg~ 170 (180)
.. .++|.++|+||||+.+|++++|||||+++++++||++|+|||||++|||||++|++++++ +++|.++|+|.+|.+
T Consensus 96 ~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~v~I~~v~v 175 (176)
T 2a2n_A 96 FHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV 175 (176)
T ss_dssp CCTTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTCCBSSCCBEEEEEE
T ss_pred cccccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCCccCCCeEEEEEEE
Confidence 88 689999999999999999999999999999999999999999999999999999999998 789999999999976
No 31
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=7.2e-48 Score=296.33 Aligned_cols=155 Identities=41% Similarity=0.741 Sum_probs=143.1
Q ss_pred CcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCCCC
Q 030245 3 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGG 82 (180)
Q Consensus 3 ~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~ 82 (180)
+++|+|+ |++|+|+||||+++||++|+||++|| +.++|+|+.||||+|+|+||||++. +++.++
T Consensus 24 ~~~V~l~-----T~~G~I~ieL~~~~aP~tv~NF~~L~----------~~g~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg 87 (185)
T 2hq6_A 24 NGKVLLK-----TTAGDIDIELWSKEAPKACRNFIQLC----------LEAYYDNTIFHRVVPGFIVQGGDPT-GTGSGG 87 (185)
T ss_dssp BCEEEEE-----ETTEEEEEEEBTTTCHHHHHHHHHHH----------HTTTTTTEECCEEETTTEEEECCTT-SSSSCC
T ss_pred CCEEEEE-----eCCccEEEEEeCCCCcHHHHHHHHHh----------hcCccCCCEEEEEECCCEEEcCCCC-CCCCCC
Confidence 6789998 78999999999999999999999999 4568999999999999999999986 677888
Q ss_pred CcccCCCCCCCcc-ccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEcCHHHH--HHHHhCCCC-CCC
Q 030245 83 ESIYGSKFADENF-VKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNVV--KAIEKMGSR-SGR 158 (180)
Q Consensus 83 ~~~~~~~~~~e~~-~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~vl--~~I~~~~~~-~~~ 158 (180)
.++|+..+++|.. .++|+++|+||||+.++++++|||||+++++++||++|+|||||+ ||+++ ++|++++++ +++
T Consensus 88 ~si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~~~~ 166 (185)
T 2hq6_A 88 ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDER 166 (185)
T ss_dssp CCTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCTTSC
T ss_pred CcccCCccccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCCCCC
Confidence 8899999999986 688999999999999999999999999999999999999999999 88764 688888886 789
Q ss_pred CCCCeEEeeeeEEeeC
Q 030245 159 TKKPVVIADCGIYYYV 174 (180)
Q Consensus 159 p~~~i~I~~cg~l~~~ 174 (180)
|.++|+|.+|+++.+|
T Consensus 167 P~~~v~I~~~~v~~~P 182 (185)
T 2hq6_A 167 PHNPHKIKSCEVLFNP 182 (185)
T ss_dssp BSSCCEEEEEEEEECT
T ss_pred CCCCeEEEEEEEeCCC
Confidence 9999999999999865
No 32
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=1.1e-47 Score=291.26 Aligned_cols=152 Identities=32% Similarity=0.538 Sum_probs=136.2
Q ss_pred CCcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCCC
Q 030245 2 ANPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTG 81 (180)
Q Consensus 2 ~~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~ 81 (180)
.||+|+|+ |++|+|+||||+++||+||+||++|| +.++|+|+.||||+|+|+||||++....+
T Consensus 3 ~~~~v~~~-----t~~G~i~ieL~~~~aP~t~~NF~~L~----------~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~-- 65 (166)
T 1v9t_A 3 GDPHVLLT-----TSAGNIELELDKQKAPVSVQNFVDYV----------NSGFYNNTTFHRVIPGFMIQGGGFTEQMQ-- 65 (166)
T ss_dssp CSCEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHH----------HTTTTTTCBEEEEETTTEEEESSBCTTCC--
T ss_pred CCeEEEEE-----eCCccEEEEEcCCCCcHHHHHHHHHh----------ccCCCCCCEEEEEECCcEEEcCCcCcCCC--
Confidence 48999999 89999999999999999999999999 55689999999999999999999864322
Q ss_pred CCcccCCCCCCCccccCCCCceEEEeeec-CCCCCCccEEEEcCCCCCCCCC-----ccEEEEEEcCHHHHHHHHhCCCC
Q 030245 82 GESIYGSKFADENFVKKHTGPGILSMANA-GPGTNGSQFFISAGKTEWLDGK-----HVAFGQVVEGMNVVKAIEKMGSR 155 (180)
Q Consensus 82 ~~~~~~~~~~~e~~~~~~~~~G~vs~~~~-g~~~~~sqFfI~l~~~~~ld~~-----~~vfG~Vi~G~~vl~~I~~~~~~ 155 (180)
...++.++++|.....++.+|+||||+. +|++++|||||++++.++||++ |+|||+|++|||||++|++++++
T Consensus 66 -~~~~g~~~~dE~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~ 144 (166)
T 1v9t_A 66 -QKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTH 144 (166)
T ss_dssp -BCCCCCCBCCCGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEE
T ss_pred -CCCCCCcccccccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCC
Confidence 2234677888887655667999999997 6999999999999999999998 99999999999999999999987
Q ss_pred C-----CCCCCCeEEeeeeEE
Q 030245 156 S-----GRTKKPVVIADCGIY 171 (180)
Q Consensus 156 ~-----~~p~~~i~I~~cg~l 171 (180)
. ++|.++|+|.+|.++
T Consensus 145 ~~~~~~~~P~~~v~I~~~~v~ 165 (166)
T 1v9t_A 145 DVGPYQNVPSKPVVILSATVL 165 (166)
T ss_dssp EETTEEEEESSCCBEEEEEEC
T ss_pred CCCccCCCcCCCeEEEEEEEe
Confidence 3 689999999999986
No 33
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=6.8e-47 Score=287.32 Aligned_cols=152 Identities=33% Similarity=0.495 Sum_probs=134.9
Q ss_pred CCcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCCC
Q 030245 2 ANPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTG 81 (180)
Q Consensus 2 ~~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~ 81 (180)
++|+|.|+ |++|+|+||||+++||+||+||++|| +.++|+|+.||||+|+|+||||++....+
T Consensus 2 p~~~v~l~-----T~~G~i~ieL~~~~aP~t~~NF~~L~----------~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~-- 64 (167)
T 3s6m_A 2 PGSMVELH-----TNHGVIKLELDEAKAPKTVENFLNYV----------KKGHYDGTIFHRVINGFMIQGGGFEPGLK-- 64 (167)
T ss_dssp CCCEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHH----------HHTTTTTEECCEEETTTEEEESSEETTTE--
T ss_pred CCcEEEEE-----eCCceEEEEEeCCCCcHHHHHHHHHh----------hhcccCCCEeEEecCCcEEEeccccCCCC--
Confidence 58899998 99999999999999999999999999 55689999999999999999999864322
Q ss_pred CCcccCCCCCCCccccCCCCceEEEeee-cCCCCCCccEEEEcCCCCCCCCC--------ccEEEEEEcCHHHHHHHHhC
Q 030245 82 GESIYGSKFADENFVKKHTGPGILSMAN-AGPGTNGSQFFISAGKTEWLDGK--------HVAFGQVVEGMNVVKAIEKM 152 (180)
Q Consensus 82 ~~~~~~~~~~~e~~~~~~~~~G~vs~~~-~g~~~~~sqFfI~l~~~~~ld~~--------~~vfG~Vi~G~~vl~~I~~~ 152 (180)
...++..+++|.....++.+|+||||+ .+|++++|||||++.++++||++ |+|||+|++|||||++|+++
T Consensus 65 -~~~~~~~~~~E~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~ 143 (167)
T 3s6m_A 65 -QKPTDAPIANEANNGLKNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAV 143 (167)
T ss_dssp -ECCCCCCBCCCGGGCCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTS
T ss_pred -CCCCCCccCCcccccccCCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcC
Confidence 234466788887644445799999999 67999999999999999999998 99999999999999999999
Q ss_pred CCCC-----CCCCCCeEEeeeeEE
Q 030245 153 GSRS-----GRTKKPVVIADCGIY 171 (180)
Q Consensus 153 ~~~~-----~~p~~~i~I~~cg~l 171 (180)
+++. ++|.++|+|.+|.+|
T Consensus 144 ~t~~~~~~~~~P~~~v~I~~~~il 167 (167)
T 3s6m_A 144 KTGSKGFHQDVPNDDVVIEKAVVV 167 (167)
T ss_dssp CBBC---CBTCBSSCCEEEEEEEC
T ss_pred CcCCCcccCCCcCCCeEEEEEEEC
Confidence 9874 799999999999885
No 34
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=6.4e-47 Score=286.58 Aligned_cols=143 Identities=32% Similarity=0.544 Sum_probs=129.5
Q ss_pred EEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCCCCCcccCCCCCCCc
Q 030245 15 QPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGSKFADEN 94 (180)
Q Consensus 15 t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 94 (180)
|++|+|+||||+++||+||+||++|| +.++|+|+.||||+|+|+||||++..+. +.+.++..+++|.
T Consensus 6 T~~G~i~ieL~~~~aP~t~~NF~~L~----------~~g~Y~g~~FhRvi~~f~iQgGd~~~~~---g~~~~g~~~~dE~ 72 (164)
T 1lop_A 6 TNHGDIVIKTFDDKAPETVKNFLDYC----------REGFYNNTIFHRVINGFMIQGGGFEPGM---KQKATKEPIKNEA 72 (164)
T ss_dssp ETTEEEEEEECTTTSHHHHHHHHHHH----------HTTTTTTEECCEEETTTEEEESSEETTT---EECCCCCCBCCCC
T ss_pred eCCCCEEEEEeCCCCcHHHHHHHHHH----------hcCCCCCCEEEEEeCCceEecCCcccCC---CcCCCCCcccccc
Confidence 89999999999999999999999999 5568999999999999999999986432 3456788899998
Q ss_pred cc-cCCCCceEEEeeec-CCCCCCccEEEEcCCCCCCCCC--------ccEEEEEEcCHHHHHHHHhCCCCC-----CCC
Q 030245 95 FV-KKHTGPGILSMANA-GPGTNGSQFFISAGKTEWLDGK--------HVAFGQVVEGMNVVKAIEKMGSRS-----GRT 159 (180)
Q Consensus 95 ~~-~~~~~~G~vs~~~~-g~~~~~sqFfI~l~~~~~ld~~--------~~vfG~Vi~G~~vl~~I~~~~~~~-----~~p 159 (180)
.. ++| .+|+||||+. +|++++|||||+++++++||++ |+|||+|++|||||++|++++++. ++|
T Consensus 73 ~~~l~~-~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P 151 (164)
T 1lop_A 73 NNGLKN-TRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVP 151 (164)
T ss_dssp CSSCCC-CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEE
T ss_pred cccccc-CccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCc
Confidence 74 555 6999999975 7999999999999999999998 999999999999999999999873 799
Q ss_pred CCCeEEeeeeEE
Q 030245 160 KKPVVIADCGIY 171 (180)
Q Consensus 160 ~~~i~I~~cg~l 171 (180)
.++|+|.+|+++
T Consensus 152 ~~~v~I~~~~v~ 163 (164)
T 1lop_A 152 KEDVIIESVTVS 163 (164)
T ss_dssp SSCCEEEEEEEC
T ss_pred CCCeEEEEEEEe
Confidence 999999999987
No 35
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.1e-46 Score=297.07 Aligned_cols=155 Identities=32% Similarity=0.554 Sum_probs=141.7
Q ss_pred CcEEEEEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCCCC
Q 030245 3 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGG 82 (180)
Q Consensus 3 ~p~v~~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~ 82 (180)
+++|+|+ |++|+|+||||++.||++|+||++|| +.+||+|+.||||+|+|+||||++. +++.++
T Consensus 21 ~~~V~l~-----T~~G~I~ieL~~d~aP~tv~NF~~L~----------~~g~Ydgt~FhRVi~~FmiQgGdp~-~~G~Gg 84 (232)
T 3bkp_A 21 RGKVVLH-----TSLGDLDVELWARECPLACRNFVQLC----------LEGYYVNTIFHRVVKDFIVQGGDPT-GTGRGG 84 (232)
T ss_dssp BCEEEEE-----ETTEEEEEEEBTTTCHHHHHHHHHHH----------HHTTTTTCBEEEEETTTEEEECCTT-SSSSCC
T ss_pred CCEEEEE-----ECCCcEEEEEcCCCCcHHHHHHHHHh----------hcCccCCCEEEEEeCCCEEEcCCCC-CCCCCC
Confidence 5788888 88999999999999999999999999 4568999999999999999999987 678888
Q ss_pred Cccc--CCCCCCCcc-ccCCCCceEEEeeecCC--------------CCCCccEEEEcCCCCCCCCCccEEEEEEcCHHH
Q 030245 83 ESIY--GSKFADENF-VKKHTGPGILSMANAGP--------------GTNGSQFFISAGKTEWLDGKHVAFGQVVEGMNV 145 (180)
Q Consensus 83 ~~~~--~~~~~~e~~-~~~~~~~G~vs~~~~g~--------------~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~G~~v 145 (180)
.+++ +..|++|.. .++|+.+|+||||+.++ ++++|||||+++++++||++|+|||+|+ ||++
T Consensus 85 ~si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~v 163 (232)
T 3bkp_A 85 ADTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHTL 163 (232)
T ss_dssp CCCTTTTCCBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGGH
T ss_pred CccccCCCccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCch
Confidence 8888 888999986 78899999999999987 6999999999999999999999999999 7765
Q ss_pred --HHHHHhCCCC-CCCCCCCeEEeeeeEEeeC
Q 030245 146 --VKAIEKMGSR-SGRTKKPVVIADCGIYYYV 174 (180)
Q Consensus 146 --l~~I~~~~~~-~~~p~~~i~I~~cg~l~~~ 174 (180)
|++|++++++ +++|.++|+|.+|+++.+|
T Consensus 164 ~~v~kI~~~~t~~~~~P~~~i~I~~~~vl~dP 195 (232)
T 3bkp_A 164 YNLMKFNDLEVGKEDRPMTPPFIKSVDVLWNP 195 (232)
T ss_dssp HHHHHHTTSCBCGGGCBSSCCBEEEEEEEECC
T ss_pred HHHHHHHcCCcCCCCCcCCCeEEEEEEEEcCC
Confidence 8999999997 7899999999999999976
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=3.4e-39 Score=269.45 Aligned_cols=137 Identities=24% Similarity=0.356 Sum_probs=116.8
Q ss_pred CcEEEEEEEECC---EEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCC
Q 030245 3 NPKVFFDMTVGG---QPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNG 79 (180)
Q Consensus 3 ~p~v~~di~~~~---t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~ 79 (180)
++.|.|++.+.+ ++.|+|+|+||++.||+||+||++|| +.+||+|+.|||+ |+|+|||||+.. ++
T Consensus 170 ra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~----------~~GfYdGt~FHRV-~gFmIQgGDp~g-~G 237 (369)
T 3rfy_A 170 RASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLV----------ERHFYDGMEIQRS-DGFVVQTGDPEG-PA 237 (369)
T ss_dssp EEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHH----------HTTTTTTEECEEE-EEEEECCCCCCC-CC
T ss_pred CeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHh----------hcCCcCCCeeeee-CCeeEecCCCCC-CC
Confidence 456667665443 36899999999999999999999999 5678999999999 999999999863 43
Q ss_pred CC---------------------CCcccCCCCCCCc-----cccCCCCceEEEeeec--CCCCCCccEEEEc-------C
Q 030245 80 TG---------------------GESIYGSKFADEN-----FVKKHTGPGILSMANA--GPGTNGSQFFISA-------G 124 (180)
Q Consensus 80 ~~---------------------~~~~~~~~~~~e~-----~~~~~~~~G~vs~~~~--g~~~~~sqFfI~l-------~ 124 (180)
.+ +.++|+..+++|. ..++|+++|+||||++ +||+++|||||++ +
T Consensus 238 ~G~~~~~~g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~ 317 (369)
T 3rfy_A 238 EGFIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPS 317 (369)
T ss_dssp SCCCSCCCCCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSC
T ss_pred CCccCcccCcCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCC
Confidence 33 3455666677664 3788999999999998 8999999999999 4
Q ss_pred CCCCCCCCccEEEEEEcCHHHHHHHHh
Q 030245 125 KTEWLDGKHVAFGQVVEGMNVVKAIEK 151 (180)
Q Consensus 125 ~~~~ld~~~~vfG~Vi~G~~vl~~I~~ 151 (180)
+.++||++|+|||+|++|||||++|++
T Consensus 318 ~~~~LDgkytVFG~VveGmdVVdkI~~ 344 (369)
T 3rfy_A 318 NSNILDGRYAVFGYVTDNEDFLADLKV 344 (369)
T ss_dssp CCSSSCSCEEEEEEEEESTTGGGGCCT
T ss_pred CCcccCCCeeEEEEEecCHHHHHHHhC
Confidence 689999999999999999999999998
No 37
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=96.30 E-value=0.062 Score=40.24 Aligned_cols=119 Identities=19% Similarity=0.248 Sum_probs=67.0
Q ss_pred EEEEEEECCEEeE-EEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecC--cEEEeCCCCCCCCCCC
Q 030245 6 VFFDMTVGGQPAG-RIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPG--FMCQGGDFTAGNGTGG 82 (180)
Q Consensus 6 v~~di~~~~t~~G-~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~--~~iq~G~~~~~~~~~~ 82 (180)
.|++|++.. .| +++.+|..+.||+||+.|.++- =|.+..+|-..-+ .|+-.++...
T Consensus 22 r~i~itl~~--~g~~~~A~Lldd~APkTcaA~~~~L-------------P~~~~viHarwSGeeVy~~lp~f~~------ 80 (188)
T 3kop_A 22 RYINITLEK--RGVTCKALLLDDVAPRTSKAVWDAL-------------PQSSQVFHGKYARNEIYNLVPAFAP------ 80 (188)
T ss_dssp CEEEEEETT--TTEEEEEEECTTTSHHHHHHHHHHC-------------CEEEECEECSSSSSEEEEEEECCSS------
T ss_pred eEEEEEEec--CCeEEEEEEccccChHHHHHHHHhC-------------CCCcceEEEEEecceEEEECCcccc------
Confidence 467776653 23 4889999999999999999976 1333333333322 2222222110
Q ss_pred CcccCCCCCCCccccCCCCceEEEeeec-----C-------------CCCCCccEEEEcCCCCC-CCCC-----ccEEEE
Q 030245 83 ESIYGSKFADENFVKKHTGPGILSMANA-----G-------------PGTNGSQFFISAGKTEW-LDGK-----HVAFGQ 138 (180)
Q Consensus 83 ~~~~~~~~~~e~~~~~~~~~G~vs~~~~-----g-------------~~~~~sqFfI~l~~~~~-ld~~-----~~vfG~ 138 (180)
.....|+...... +|-|++-.- | ..+...++.|-.+.+.. +.++ -.+|++
T Consensus 81 -----~~~g~EN~T~~P~-pGDIl~f~f~p~~lG~~~yGy~~~~~~~~~~~~~dl~ifYG~~~~l~~~~~GwlpGN~F~T 154 (188)
T 3kop_A 81 -----KEPGAENTTVTPI-PGDVCYFTFTSNDLKTPSHGYEADSGTDEVQTIVDLAVFYGRNNLLLNGDTGWVPGNVFAT 154 (188)
T ss_dssp -----SCCCSCSEESSCC-TTEEEEEEEEHHHHSSGGGCC--------CCEEEEEEEECSSSCCCEETTTEECCEEEEEE
T ss_pred -----cCCCcCCCCCCCC-CCcEEEEecCCcccCCccccccccccccCCCcceEEEEEecccccccccccceecCcEEEE
Confidence 1233444444333 787876310 1 01122466666665442 2221 357999
Q ss_pred EEcCHHHHHHHHh
Q 030245 139 VVEGMNVVKAIEK 151 (180)
Q Consensus 139 Vi~G~~vl~~I~~ 151 (180)
|++|+|-|.++.+
T Consensus 155 IveGle~la~~c~ 167 (188)
T 3kop_A 155 IVEGLDEMAAACQ 167 (188)
T ss_dssp EEESHHHHHHHHH
T ss_pred EecCHHHHHHHHH
Confidence 9999998877765
No 38
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=95.20 E-value=0.051 Score=39.75 Aligned_cols=104 Identities=18% Similarity=0.181 Sum_probs=60.9
Q ss_pred EEEEECCEEeEEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCCCCCcccC
Q 030245 8 FDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYG 87 (180)
Q Consensus 8 ~di~~~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~ 87 (180)
+.|.+++ ..+.++|+.+.||+||+.|+++-= +... +.+. .+- +-+ +..
T Consensus 32 I~i~~~~---~~~~a~L~D~~aP~Ta~~f~~~LP-------------l~~~-~~~~-g~E-~y~-~lp------------ 79 (153)
T 2nnz_A 32 LRIRFES---AECEVELYEEWAPETVRAIADALP-------------IKST-ANRW-GDE-IYF-TTQ------------ 79 (153)
T ss_dssp EEEEETT---EEEEECCCTTSCHHHHHHHHHTCS-------------EEEE-EEEE-TTE-EEE-CCS------------
T ss_pred EEEEECC---EEEEEEEcCCCCHHHHHHHHHhCC-------------cEEE-HHhh-CCc-EEE-ECC------------
Confidence 4555666 569999999999999999999861 1111 1121 110 100 000
Q ss_pred CCCCC-CccccCCCCceEEEeeecCCCCCCccEEEEcCCCCCCC------CCccEEEEEEcCHHHHHHH
Q 030245 88 SKFAD-ENFVKKHTGPGILSMANAGPGTNGSQFFISAGKTEWLD------GKHVAFGQVVEGMNVVKAI 149 (180)
Q Consensus 88 ~~~~~-e~~~~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld------~~~~vfG~Vi~G~~vl~~I 149 (180)
..+.. |+. .....+|-|++-..+. .+.|-.++.|... ..-.+||+|.+|++.|.++
T Consensus 80 ~~l~~~en~-~~~~~~GDI~Yy~pg~-----~LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~ 142 (153)
T 2nnz_A 80 VAVEKEENS-KDVVELGDVAYWIPGK-----AICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGV 142 (153)
T ss_dssp CCCCCSSCC-BCCCCTTEEEEETTTT-----EEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGC
T ss_pred CCCCCCCCC-cccCCCCeEEEeCCCC-----EEEEEECCccccccccccccccEEEEEEccCHHHHhhC
Confidence 01111 222 2234588888876543 4888787774322 2247899999998776554
No 39
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=73.74 E-value=21 Score=25.20 Aligned_cols=96 Identities=19% Similarity=0.181 Sum_probs=56.2
Q ss_pred EEEEEEEcCCCChHHHHHHHHhhcCCCCCCcCCCceeecCCEEEEeecCcEEEeCCCCCCCCCCCCcccCCCCC-CCccc
Q 030245 18 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGSKFA-DENFV 96 (180)
Q Consensus 18 G~i~ieL~~~~aP~~~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~-~e~~~ 96 (180)
..+..+|+.. |.|++.|+++-= -......|- .-+|--.|.. .+ +|+..
T Consensus 22 ~~v~a~L~Dn--p~Ta~~~~~~LP------l~~~~~~~g-~E~y~~~p~~----------------------l~~~e~~~ 70 (136)
T 1zx8_A 22 GKCVIDLNEE--YEVVKLLKEKIP------FESVVNTWG-EEIYFSTPVN----------------------VQKMENPR 70 (136)
T ss_dssp CEEEEEEETT--SHHHHHHHHHCS------EEEECEESS-SEEEEECSCC----------------------CCCCSSEE
T ss_pred cEEEEEEcCC--HHHHHHHHHHCC------cEEEHHHhC-CcEEEECCcc----------------------CCCCCCCC
Confidence 4699999765 889999999861 011222342 3333333321 11 01111
Q ss_pred cCCCCceEEEeeecCCCCCCccEEEEcCCCCCCCC------CccEEEEEEcCHHHHHHHH
Q 030245 97 KKHTGPGILSMANAGPGTNGSQFFISAGKTEWLDG------KHVAFGQVVEGMNVVKAIE 150 (180)
Q Consensus 97 ~~~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~------~~~vfG~Vi~G~~vl~~I~ 150 (180)
.....|-|+.-..+. .|.|-.++.|...+ .-.+||||.+|++.|.++.
T Consensus 71 -~~~~~GDIaYw~pgg-----~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v~ 124 (136)
T 1zx8_A 71 -EVVEIGDVGYWPPGK-----ALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKIK 124 (136)
T ss_dssp -SSBCTTEEEEEGGGT-----EEEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGCC
T ss_pred -ccCCCCcEEEeCCCC-----EEEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhCC
Confidence 223478888876543 77787877753332 3578999999987765543
No 40
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=49.79 E-value=9.6 Score=18.81 Aligned_cols=19 Identities=21% Similarity=0.205 Sum_probs=12.7
Q ss_pred eecCCCCCCccEEEEcCCC
Q 030245 108 ANAGPGTNGSQFFISAGKT 126 (180)
Q Consensus 108 ~~~g~~~~~sqFfI~l~~~ 126 (180)
+........|..||||.+.
T Consensus 2 a~kpeKR~aSSvFITLapp 20 (26)
T 2k9u_B 2 ASKPEKRVASSVFITLAPP 20 (26)
T ss_dssp CCCSSSSCEEEEEEEECCS
T ss_pred CCcchhheeeeEEEEecCc
Confidence 3333445568899999864
No 41
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=30.88 E-value=26 Score=29.10 Aligned_cols=51 Identities=14% Similarity=0.226 Sum_probs=41.2
Q ss_pred CCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEc-CHHHHHHHH
Q 030245 99 HTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVE-GMNVVKAIE 150 (180)
Q Consensus 99 ~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~-G~~vl~~I~ 150 (180)
..++|.|.+.|..-.....+.-|++.+.| -|++.-|+|+|.+ -+.+|+-|.
T Consensus 325 ~r~rGdItIdN~~ygRY~GElQI~l~dlp-~d~r~NVVG~I~~edl~LLd~I~ 376 (385)
T 1x7f_A 325 LQERGQVVIGNNSFGKYKGELQIILKEMP-IDERKNIVGTIAEEELFLLDYVG 376 (385)
T ss_dssp CBCTTEEEEECGGGGGGTTCEEEECSCBC-CCTTEEEEEEECGGGGGGGGGCC
T ss_pred cccCCcEEEeCCCccccccEeeEEcccCC-CCCCeeEEEEECHHHHHHHHhcC
Confidence 34699999999876666779999999988 4778889999984 677777665
No 42
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=29.29 E-value=24 Score=29.18 Aligned_cols=52 Identities=12% Similarity=0.173 Sum_probs=42.1
Q ss_pred CCCceEEEeeecCCCCCCccEEEEcCCCCCCCCCccEEEEEEc-CHHHHHHHHh
Q 030245 99 HTGPGILSMANAGPGTNGSQFFISAGKTEWLDGKHVAFGQVVE-GMNVVKAIEK 151 (180)
Q Consensus 99 ~~~~G~vs~~~~g~~~~~sqFfI~l~~~~~ld~~~~vfG~Vi~-G~~vl~~I~~ 151 (180)
...+|.|.+.+..-.....+.-|++.+.| -|++.-|+|+|.+ -+.+|+-|..
T Consensus 299 ~r~rGdItIdN~~ygrY~GElQI~l~dlp-~d~r~NVVG~I~~edl~LLd~I~~ 351 (372)
T 2p0o_A 299 ARPVGTVTIDNEKYGRYMGEIQVTLVDLP-KDEKVNTITRIIDKDQTILPLIKA 351 (372)
T ss_dssp CBCTTEEEEECGGGGGGTTCEEEESSCBC-CCTTEEEEEEBCGGGGGGGGGCCT
T ss_pred cccCCeEEEeCCCccccccEeeEEcccCC-CCCCeEEEEEECHHHHHHHHhcCC
Confidence 34689999999876666779999999998 5788889999984 6778877653
No 43
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=24.17 E-value=1.4e+02 Score=19.50 Aligned_cols=27 Identities=19% Similarity=0.278 Sum_probs=20.0
Q ss_pred ECCEEeEEEEEEEcCCCChHHHHHHHHhh
Q 030245 12 VGGQPAGRIVMELFADVTPRTAENFRALC 40 (180)
Q Consensus 12 ~~~t~~G~i~ieL~~~~aP~~~~nF~~l~ 40 (180)
+.+++.|.++++|-++ +...+..+++.
T Consensus 59 i~~~~~G~L~v~l~G~--~~~~~~ai~~L 85 (106)
T 3dhx_A 59 AGGVKFGIMLTEMHGT--QQDTQAAIAWL 85 (106)
T ss_dssp ETTEEEEEEEEEEESC--HHHHHHHHHHH
T ss_pred ECCeeEEEEEEEEeCC--HHHHHHHHHHH
Confidence 5788999999999987 44555555544
No 44
>3q6c_A Probable receptor YHHM; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.60A {Klebsiella variicola at-22}
Probab=22.25 E-value=87 Score=20.04 Aligned_cols=28 Identities=39% Similarity=0.793 Sum_probs=22.9
Q ss_pred HHHHHHhhcCCCCCCcCCCceeecCCEEEEeecC
Q 030245 33 AENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPG 66 (180)
Q Consensus 33 ~~nF~~l~~g~~~~~~~~~~~~Y~g~~f~rv~~~ 66 (180)
...|-.|+.|++| ...|.|+.|....|+
T Consensus 54 ~~~Y~~l~~Gd~G------~Lt~QGTRF~~F~~~ 81 (83)
T 3q6c_A 54 APQYHALSVGDRG------MLSYKGTAFVAFTPD 81 (83)
T ss_dssp HHHHHHCCTTCEE------EEEEETTEEEEEEEC
T ss_pred HHHcCCCCCCCEE------EEEEeeeEEEEEecC
Confidence 4488999988876 357999999998876
Done!