BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030258
(180 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84WW5|VAP13_ARATH Vesicle-associated protein 1-3 OS=Arabidopsis thaliana GN=PVA13
PE=2 SV=1
Length = 239
Score = 256 bits (653), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 125/176 (71%), Positives = 145/176 (82%), Gaps = 1/176 (0%)
Query: 1 MSTGDLVNIQPSELKFPFELKKQSSCSMQLTNKTD-KFVAFKVKTTNPKKYCVRPNTGII 59
M+TGDLVNI P+ELKFPFELKKQSSCSMQLTNKT + VAFKVKTTNP+KYCVRPNTG++
Sbjct: 1 MTTGDLVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVV 60
Query: 60 LPRTSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEF 119
LP SC VTVTMQAQKEAP D QCKDKFL+ +VV DG T+K++ +MF KE G+V+E+F
Sbjct: 61 LPGDSCNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDF 120
Query: 120 KLRVVYIPANPPSPVPEGSEEGSSPRAFSQENGNHHNSSFDDVSKSLEVPKEKSSE 175
KLRVVYIPANPPSPVPEGSEEG+SP A + + S FDDVS++ E EKSSE
Sbjct: 121 KLRVVYIPANPPSPVPEGSEEGNSPMASLNDIASQSASLFDDVSRTFEETSEKSSE 176
>sp|Q8VZ95|VAP11_ARATH Vesicle-associated protein 1-1 OS=Arabidopsis thaliana GN=PVA11
PE=1 SV=1
Length = 256
Score = 220 bits (561), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 107/161 (66%), Positives = 127/161 (78%), Gaps = 1/161 (0%)
Query: 1 MSTGDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIIL 60
MS +L+ ++P +L+FPFELKKQ SCS+ LTNKTD VAFKVKTTNPKKYCVRPNTG++L
Sbjct: 17 MSNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVL 76
Query: 61 PRTSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFK 120
PR++C V VTMQAQKEAP D QCKDKFLL V+A G TAK++ P+MF+KE G VEE K
Sbjct: 77 PRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETK 136
Query: 121 LRVVYI-PANPPSPVPEGSEEGSSPRAFSQENGNHHNSSFD 160
LRV Y+ P PPSPV EGSEEGSSPRA +NG+ SF+
Sbjct: 137 LRVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSFE 177
>sp|Q9SHC8|VAP12_ARATH Vesicle-associated protein 1-2 OS=Arabidopsis thaliana GN=PVA12
PE=1 SV=1
Length = 239
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/152 (69%), Positives = 120/152 (78%), Gaps = 1/152 (0%)
Query: 3 TGDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPR 62
+ +L+ I P +L+FPFELKKQ SCS+ L NKTD +VAFKVKTTNPKKYCVRPNTG++ PR
Sbjct: 2 SNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPR 61
Query: 63 TSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLR 122
+S V VTMQAQKEAP D QCKDKFLL VVA GAT KD+ +MF+KE G VEE KLR
Sbjct: 62 SSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLR 121
Query: 123 VVYI-PANPPSPVPEGSEEGSSPRAFSQENGN 153
VVY+ P PPSPV EGSEEGSSPRA +NGN
Sbjct: 122 VVYVAPPRPPSPVREGSEEGSSPRASVSDNGN 153
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 181 bits (460), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/166 (55%), Positives = 118/166 (71%), Gaps = 2/166 (1%)
Query: 5 DLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTS 64
+L+ I P +++FP EL K+ SCS+ LTNKT+ +VAFK KTTN KKY VRPN G++LPR+S
Sbjct: 175 ELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPRSS 234
Query: 65 CAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVV 124
C V V MQA KEAP D QC+DK L V TAKD+ +MF+KE G EE +L+V+
Sbjct: 235 CEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLKVM 294
Query: 125 YI-PANPPSPVPEGSEEGSSPRAFSQENGNHHNSSFDDVSKSLEVP 169
Y+ P PPSPV EG+EEGSSPRA +NGN + +F D+ +SL VP
Sbjct: 295 YVTPPQPPSPVQEGTEEGSSPRASVSDNGN-ASEAFVDMLRSLLVP 339
Score = 164 bits (415), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 103/154 (66%), Gaps = 1/154 (0%)
Query: 1 MSTGDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIIL 60
MST +L+ +++FP EL KQ SCS+ LTNKTD +VAFK +TT PK YCV+P+ G++L
Sbjct: 1 MSTDELLTFDHVDIRFPIELNKQGSCSLNLTNKTDNYVAFKAQTTKPKMYCVKPSVGVVL 60
Query: 61 PRTSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFK 120
PR+SC V V MQA KEAP D QCKDK L V G K++ +MF+KE G VEE
Sbjct: 61 PRSSCEVLVVMQALKEAPADRQCKDKLLFQCKVVEPGTMDKEVTSEMFSKEAGHRVEETI 120
Query: 121 LRVVYI-PANPPSPVPEGSEEGSSPRAFSQENGN 153
+++Y+ P P SPV EG E+GSSP A + GN
Sbjct: 121 FKIIYVAPPQPQSPVQEGLEDGSSPSASVSDKGN 154
>sp|O82213|VAP31_ARATH Vesicle-associated protein 3-1 OS=Arabidopsis thaliana GN=PVA31
PE=3 SV=1
Length = 149
Score = 163 bits (413), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 78/126 (61%), Positives = 96/126 (76%)
Query: 1 MSTGDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIIL 60
MS +L+ I+P L+FPFELKKQ SCS+ LTNKTD VAFKVKTTN YCVRPN G+IL
Sbjct: 1 MSNNELLEIEPMYLQFPFELKKQMSCSLYLTNKTDNNVAFKVKTTNRNNYCVRPNYGLIL 60
Query: 61 PRTSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFK 120
P+++C V VTMQAQKE P D Q +KF++ SV+A G TAK++ +MF+KE G VVEE K
Sbjct: 61 PKSTCKVLVTMQAQKEVPSDMQSFEKFMIQSVLASPGVTAKEVTREMFSKESGHVVEETK 120
Query: 121 LRVVYI 126
LRV Y+
Sbjct: 121 LRVTYV 126
>sp|Q9LVU1|VAP21_ARATH Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21
PE=2 SV=1
Length = 220
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 97/138 (70%), Gaps = 3/138 (2%)
Query: 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSC 65
L++IQP ELKF FEL+KQS C +++ NKT+ +VAFKVKTT+PKKY VRPNTG+I P SC
Sbjct: 9 LISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTGVIQPWDSC 68
Query: 66 AVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVVY 125
+ VT+QAQ+E PPD QCKDKFLL S + P ++ D FTK+ GK + E KL+V Y
Sbjct: 69 IIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLTECKLKVSY 128
Query: 126 IPANPPSPVPEGSEEGSS 143
I PS SE G++
Sbjct: 129 I---TPSTTQRSSESGAT 143
>sp|B9DHD7|VAP22_ARATH Vesicle-associated protein 2-2 OS=Arabidopsis thaliana GN=PVA22
PE=1 SV=1
Length = 386
Score = 149 bits (376), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 93/133 (69%), Gaps = 3/133 (2%)
Query: 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSC 65
L++IQP L+F +LKKQ+SC +QLTN T +VAFKVKTT+PKKYCVRPN G++ P+++C
Sbjct: 5 LLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAPKSTC 64
Query: 66 AVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVVY 125
TV MQA KE PPD CKDKFL+ S T +DI MF+K +GK +EE KLRV
Sbjct: 65 EFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENKLRVTL 124
Query: 126 IPANPPSPVPEGS 138
+ PPS PE S
Sbjct: 125 V---PPSDSPELS 134
>sp|O60119|YH75_SCHPO Vesicle-associated membrane protein-associated protein C16G5.05c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16G5.05c PE=1 SV=1
Length = 383
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
Query: 38 VAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQKEAP-PDFQCKDKFLLLSVVAPD 96
V FKVKTT PK YCVRPN+G I P+++ V V +QA KE P PDF+C+DKFL+ S+ D
Sbjct: 33 VIFKVKTTAPKHYCVRPNSGKIEPKSTVNVQVLLQAMKEEPAPDFKCRDKFLIQSMAIGD 92
Query: 97 GATAKDIGPDMFTKE---DGKVVEEFKLRVVYIPANPP 131
T+ F E G+ + + K+R VY PP
Sbjct: 93 ADTSNVENYHEFWTEMEKQGRSIFDRKIRCVYSTKQPP 130
>sp|P40075|SCS2_YEAST Vesicle-associated membrane protein-associated protein SCS2
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SCS2 PE=1 SV=3
Length = 244
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 71/124 (57%), Gaps = 5/124 (4%)
Query: 7 VNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCA 66
V I P L + L +QS+ ++N +D+ +AFKVKTT PK YCVRPN ++ P +
Sbjct: 4 VEISPDVLVYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQ 63
Query: 67 VTVTMQAQKEAP-PDFQCKDKFLLLSVVAP---DGATAKDIGPDMFTKEDGKVVEEFKLR 122
V V E P DF+C+DKFL++++ +P +G D+ D+ + + + + K++
Sbjct: 64 VQVIFLGLTEEPAADFKCRDKFLVITLPSPYDLNGKAVADVWSDLEAEFKQQAISK-KIK 122
Query: 123 VVYI 126
V Y+
Sbjct: 123 VKYL 126
>sp|Q10484|YDFC_SCHPO Uncharacterized protein C17C9.12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC17C9.12 PE=1 SV=2
Length = 319
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 12 SELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTM 71
S + FP L + C ++L N + FKVKTT PK+YCVRPN G I ++ +V V +
Sbjct: 7 STIVFPRPLTRLVKCDLELRNTAPYPIGFKVKTTAPKQYCVRPNGGRIEANSAVSVEVIL 66
Query: 72 QAQKEAP-PDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVVY 125
Q P P +C+DKFL+ S DI D++T+ + E K+R VY
Sbjct: 67 QPLDHEPAPGTKCRDKFLVQSTELKPELQGMDIA-DIWTQVSKANISERKIRCVY 120
>sp|Q16943|VP33_APLCA Vesicle-associated membrane protein/synaptobrevin-binding protein
OS=Aplysia californica PE=2 SV=1
Length = 260
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 24/157 (15%)
Query: 13 ELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQ 72
EL+F + ++L+N TD+ + FKVKTT PK+YCVRPN+GI+ P+TS AV V +Q
Sbjct: 15 ELRFKGPFTDVVTADLKLSNPTDRRICFKVKTTAPKRYCVRPNSGILEPKTSIAVAVMLQ 74
Query: 73 AQKEAPPDFQCKDKFLLLSVVAPDGAT------AKDIGPDMFTKEDGKVVEEFKLRVVYI 126
P + + K KF++ S+ APD KD P+ + KLR V+
Sbjct: 75 PFNYDPNE-KNKHKFMVQSMYAPDHVVESQELLWKDAPPESLM--------DTKLRCVF- 124
Query: 127 PANPPSPVPEGSEEGSSPRAFSQENGNHH--NSSFDD 161
+P+GS + + A + H S+ +D
Sbjct: 125 ------EMPDGSHQAPASDASRATDAGAHFSESALED 155
>sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associated protein A OS=Pongo
abelii GN=VAPA PE=2 SV=2
Length = 249
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Query: 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSC 65
LV P++LKF + +++L N +D+ V FKVKTT P++YCVRPN+GII P ++
Sbjct: 15 LVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTV 74
Query: 66 AVTVTMQAQKEAPPDFQCKDKFLLLSVVAP 95
V+V +Q + P+ + K KF++ ++ AP
Sbjct: 75 TVSVMLQPF-DYDPNEKSKHKFMVQTIFAP 103
>sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associated protein A OS=Homo
sapiens GN=VAPA PE=1 SV=3
Length = 249
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Query: 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSC 65
LV P++LKF + +++L N +D+ V FKVKTT P++YCVRPN+GII P ++
Sbjct: 15 LVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTV 74
Query: 66 AVTVTMQAQKEAPPDFQCKDKFLLLSVVAP 95
V+V +Q + P+ + K KF++ ++ AP
Sbjct: 75 TVSVMLQPF-DYDPNEKSKHKFMVQTIFAP 103
>sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associated protein A OS=Mus
musculus GN=Vapa PE=1 SV=2
Length = 249
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSC 65
LV PS+LKF + +++L N +D+ V FKVKTT P++YCVRPN+GII P +
Sbjct: 15 LVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIV 74
Query: 66 AVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDG-----ATAKDIGPDMFTKEDGKVVEEF 119
V+V +Q + P+ + K KF++ ++ AP A K+ PD + V E
Sbjct: 75 TVSVMLQPF-DYDPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELMDSKLRCVFEM 132
>sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associated protein A OS=Bos
taurus GN=VAPA PE=2 SV=1
Length = 249
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 6/106 (5%)
Query: 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSC 65
LV P++LKF + +++L N +D+ V FKVKTT P++YCVRPN+GII P +
Sbjct: 15 LVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGLTV 74
Query: 66 AVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDG-----ATAKDIGPD 106
V+V +Q + P+ + K KF++ ++ AP A K+ PD
Sbjct: 75 TVSVMLQPF-DYDPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPD 119
>sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associated protein A OS=Rattus
norvegicus GN=Vapa PE=1 SV=3
Length = 249
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSC 65
LV PS+LKF + +++L N +D+ V FKVKTT P++YCVRPN+G+I P +
Sbjct: 15 LVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGVIDPGSIV 74
Query: 66 AVTVTMQAQKEAPPDFQCKDKFLLLSVVAP 95
V+V +Q + P+ + K KF++ ++ AP
Sbjct: 75 TVSVMLQPF-DYDPNEKSKHKFMVQTIFAP 103
>sp|Q6Q595|SCS22_YEAST Vesicle-associated membrane protein-associated protein SCS22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SCS22 PE=1 SV=2
Length = 175
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 16/162 (9%)
Query: 7 VNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCA 66
+ I P +L F L KQS+ ++L N +K V FKV+T+ P KYCVRPN II S
Sbjct: 1 MRIVPEKLVFKAPLNKQSTEYIKLENDGEKRVIFKVRTSAPTKYCVRPNVAIIGAHESVN 60
Query: 67 VTVTMQAQKEAPPD---FQCKDKFLLLSVVAP-------DGATAKDIGPDMFTK-EDGKV 115
V + ++ D Q +DKFL++++ P DG D P++ + +D V
Sbjct: 61 VQIVFLGLPKSTADDEMDQKRDKFLIVTLPIPAAYQNVEDGELLSD-WPNLEEQYKDDIV 119
Query: 116 VEEFKLRVVYIPANPPSPVPEGSEEGSSPRAFSQENGNHHNS 157
++ K+ +P PS G+ + S RA S NG +S
Sbjct: 120 FKKIKIFHSVLPKRKPS----GNHDAESARAPSAGNGQSLSS 157
>sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associated protein B OS=Bos
taurus GN=VAPB PE=2 SV=1
Length = 243
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 21/183 (11%)
Query: 6 LVNIQPS-ELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTS 64
+++++P ELKF + +++L N TD+ V FKVKTT P++YCVRPN+GII S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGAS 66
Query: 65 CAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVV 124
V+V +Q + P+ + K KF++ S+ AP + + ED + + KLR V
Sbjct: 67 INVSVMLQPF-DYDPNEKSKHKFMVQSMFAPTDTSDMEAVWKEAKPED---LMDSKLRCV 122
Query: 125 Y-IPANPPSP--------VPEGSEEGSSPRAFSQENGNHHNSSFDD--VSKSLEVPKEKS 173
+ +PA P +P + + +P +SS DD V K +E K
Sbjct: 123 FELPAENDKPHDVEINKIIPTTASKTETPTV-----SKALSSSLDDTEVKKVMEECKRLQ 177
Query: 174 SEV 176
SEV
Sbjct: 178 SEV 180
>sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associated protein B OS=Sus
scrofa GN=VAPB PE=3 SV=1
Length = 243
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 6/130 (4%)
Query: 6 LVNIQPS-ELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTS 64
+++++P ELKF + +++L N TD+ V FKVKTT P++YCVRPN+GII S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGAS 66
Query: 65 CAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVV 124
V+V +Q + P+ + K KF++ S+ AP + + ED + + KLR V
Sbjct: 67 INVSVMLQPF-DYDPNEKSKHKFMVQSMFAPADTSDMEAAWKEAKPED---LMDSKLRCV 122
Query: 125 Y-IPANPPSP 133
+ +PA P
Sbjct: 123 FELPAENDKP 132
>sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associated protein B/C
OS=Homo sapiens GN=VAPB PE=1 SV=3
Length = 243
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 6 LVNIQPS-ELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTS 64
+++++P ELKF + +++L N TD+ V FKVKTT P++YCVRPN+GII S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGAS 66
Query: 65 CAVTVTMQAQKEAPPDFQCKDKFLLLSVVAP 95
V+V +Q + P+ + K KF++ S+ AP
Sbjct: 67 INVSVMLQPF-DYDPNEKSKHKFMVQSMFAP 96
>sp|Q9Z269|VAPB_RAT Vesicle-associated membrane protein-associated protein B
OS=Rattus norvegicus GN=Vapb PE=1 SV=3
Length = 243
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 6 LVNIQPS-ELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTS 64
+++++P ELKF + +++L N TD+ V FKVKTT P++YCVRPN+G+I S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGVIDAGAS 66
Query: 65 CAVTVTMQAQKEAPPDFQCKDKFLLLSVVAP 95
V+V +Q + P+ + K KF++ S+ AP
Sbjct: 67 LNVSVMLQPF-DYDPNEKSKHKFMVQSMFAP 96
>sp|Q9QY76|VAPB_MOUSE Vesicle-associated membrane protein-associated protein B OS=Mus
musculus GN=Vapb PE=2 SV=3
Length = 243
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 6 LVNIQPS-ELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTS 64
+++++P ELKF + +++L N TD+ V FKVKTT P++YCVRPN+G+I S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTVPRRYCVRPNSGVIDAGAS 66
Query: 65 CAVTVTMQAQKEAPPDFQCKDKFLLLSVVAP 95
V+V +Q + P+ + K KF++ S+ AP
Sbjct: 67 LNVSVMLQPF-DYDPNEKSKHKFMVQSMFAP 96
>sp|Q1ECE0|VAP41_ARATH Vesicle-associated protein 4-1 OS=Arabidopsis thaliana GN=PVA41
PE=2 SV=1
Length = 266
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Query: 12 SELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTM 71
S L FP+E KQ +++L N + AFK +TT PK +RP G++ P S TV
Sbjct: 83 SYLYFPYEPGKQVRSAIKLKNTSKSHTAFKFQTTAPKSCYMRPPGGVLAPGESVFATVFK 142
Query: 72 -----QAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVVYI 126
+ ++ P + + K KF ++S+ G + P++F ++ +V E LRV++I
Sbjct: 143 FVEHPENNEKQPLNQKSKVKFKIMSLKVKPGV---EYVPELFDEQKDQVAVEQVLRVIFI 199
Query: 127 PANPPS 132
A+ PS
Sbjct: 200 DADRPS 205
>sp|Q8VYN2|VAP42_ARATH Vesicle-associated protein 4-2 OS=Arabidopsis thaliana GN=PVA42
PE=1 SV=1
Length = 295
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 1 MSTGDLVNIQPSE-LKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGII 59
+ T + + PSE L FP+E KQ ++++ N + VAFK +TT PK +RP I+
Sbjct: 102 LPTKRRLKLDPSEKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAIL 161
Query: 60 LPRTSCAVTVTMQAQ----KEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKV 115
P + TV + E P D + + KF ++S+ D P++F ++ V
Sbjct: 162 APGETIIATVFKFVEPPENNEKPMDQRSRVKFKIMSLKV---KGPMDYVPELFDEQKDDV 218
Query: 116 VEEFKLRVVYI 126
+E LRV+++
Sbjct: 219 SKEQILRVIFL 229
>sp|Q8LPQ7|VAP43_ARATH Vesicle-associated protein 4-3 OS=Arabidopsis thaliana GN=PVA43
PE=2 SV=1
Length = 287
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 9/138 (6%)
Query: 1 MSTGDLVNIQPS-ELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGII 59
+ T + + PS +L FP+E KQ ++++ N + VAFK +TT PK +RP I+
Sbjct: 94 LPTKRRLKLDPSAKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTVPKSCFMRPAGAIL 153
Query: 60 LPRTSCAVTVTMQAQ----KEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKV 115
P TV + E P + + KF ++S+ D P++F ++ V
Sbjct: 154 APGEEIIATVFKFVEPPENNEKPMEQKSGVKFKIMSLKM---KVPTDYMPELFEEQKDHV 210
Query: 116 VEEFKLRVVYI-PANPPS 132
EE +RVV++ P NP S
Sbjct: 211 SEEQVMRVVFLDPENPNS 228
>sp|Q8NHP6|MSPD2_HUMAN Motile sperm domain-containing protein 2 OS=Homo sapiens GN=MOSPD2
PE=1 SV=1
Length = 518
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 4 GDLVNIQPSE-LKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPR 62
G L++I P+E L F + + LTN T VAFKV+TT P+KY V+P+ P
Sbjct: 325 GPLLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPG 384
Query: 63 TSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKV----VEE 118
S + V+ +D+FL++ A + + GP T+ +V V E
Sbjct: 385 ASVDIVVSPHGGLTV----SAQDRFLIM---AAEMEQSSGTGPAELTQFWKEVPRNKVME 437
Query: 119 FKLRVVYIPANPPSPV 134
+LR + ++ P+ +
Sbjct: 438 HRLRCHTVESSKPNTL 453
>sp|Q9CWP6|MSPD2_MOUSE Motile sperm domain-containing protein 2 OS=Mus musculus GN=Mospd2
PE=1 SV=2
Length = 518
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 4 GDLVNIQPSE-LKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPR 62
G L++I P+E L F + + LTN T VAFKV+TT P+KY V+P+ P
Sbjct: 325 GPLLHISPAEELYFGSIESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPG 384
Query: 63 TSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGP---DMFTKE--DGKVVE 117
S + V+ +D+FL ++A + + GP F KE KV+E
Sbjct: 385 ASIDIIVSPHGGLTV----SAQDRFL---IMAAEMEQSSGTGPAELSQFWKEVPRNKVME 437
Query: 118 EFKLRVVYIPANPPSPV 134
+LR + ++ P+ +
Sbjct: 438 H-RLRCHTVESSKPNSL 453
>sp|P27440|MSP2_ASCSU Major sperm protein isoform beta OS=Ascaris suum PE=1 SV=3
Length = 127
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 7 VNIQP-SELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSC 65
+N QP S++ F + + +++TN + + + +KTTN ++ V P G++ P+ S
Sbjct: 10 INTQPGSKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLGVDPPCGVLDPKESV 69
Query: 66 AVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKV 115
+ V+ A D D+ + PDGA AK + F + DG V
Sbjct: 70 LMAVSCDTFNAATEDLN-NDRITIEWTNTPDGA-AKQFRREWF-QGDGMV 116
>sp|P27439|MSP1_ASCSU Major sperm protein isoform alpha OS=Ascaris suum PE=1 SV=3
Length = 127
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 4 GDLVNIQPSE-LKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPR 62
GD +N QPS+ + F + + +++TN + + + +KTTN ++ V P G++ P+
Sbjct: 8 GD-INTQPSQKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLSVDPPCGVLDPK 66
Query: 63 TSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKV 115
+ V+ A D D+ + PDGA AK + F + DG V
Sbjct: 67 EKVLMAVSCDTFNAATEDLN-NDRITIEWTNTPDGA-AKQFRREWF-QGDGMV 116
>sp|P13263|MSP2_ONCVO Major sperm protein 2 OS=Onchocerca volvulus PE=2 SV=3
Length = 127
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 4 GDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRT 63
GD+ S++ F + + +++TN + + + +KTTN K+ V P G++ P+
Sbjct: 8 GDIHTQPGSKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMKRLGVDPPCGVLDPKE 67
Query: 64 SCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKV 115
+ + V+ D D+ + PDGA AK + F + DG V
Sbjct: 68 NVLMAVSCDTFDATREDIN-NDRITIEWTNTPDGA-AKQFRREWF-QGDGMV 116
>sp|P13262|MSP1_ONCVO Major sperm protein 1 OS=Onchocerca volvulus PE=2 SV=3
Length = 127
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Query: 4 GDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRT 63
GD+ S++ F + + + +TN + + + +KTTN K+ V P G++ P+
Sbjct: 8 GDIHTQPGSKIVFNAPYDDKHTYHINITNAGGRRIGWAIKTTNMKRLGVDPPCGVLDPKE 67
Query: 64 SCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKV 115
+ + V+ D D+ + PDGA AK + F + DG V
Sbjct: 68 NVLMAVSCDTFDATREDIN-NDRITIEWTNTPDGA-AKQFRREWF-QGDGMV 116
>sp|P34538|YNC5_CAEEL Uncharacterized protein R05D3.5 OS=Caenorhabditis elegans
GN=R05D3.5 PE=2 SV=3
Length = 178
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 19 ELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQKEAP 78
E +K S +++L N T V++KV+ T+ + V+P G + P + ++ + Q Q +
Sbjct: 76 EDRKPISVNLKLHNPTAVTVSYKVRCTSADIFRVQPPLGFVKPSETVSIVIWYQNQDKK- 134
Query: 79 PDFQCKDKFLLLSVVAPDGATAKDIGPD 106
D K+ + DG TA+++ +
Sbjct: 135 -DAISKNHYFAFYHTNSDGRTARELWAN 161
>sp|P34593|YOD1_CAEEL Uncharacterized protein ZC262.1 OS=Caenorhabditis elegans
GN=ZC262.1 PE=4 SV=1
Length = 131
Score = 34.7 bits (78), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 19 ELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQKEAP 78
E +K S +++L N T V++KV+ T+ + V+P G + P + ++ + Q Q +
Sbjct: 29 EDRKPISVNLKLHNPTAVTVSYKVRCTSADIFRVQPPLGFVKPSETVSIVIWYQNQDK-- 86
Query: 79 PDFQCKDKFLLLSVVAPDGATAKDIGPD 106
D K+ + DG TA+++ +
Sbjct: 87 KDAISKNHYFAFYHTNSDGRTARELWAN 114
>sp|Q23246|SSPZC_CAEEL Sperm-specific protein ZC168.6 OS=Caenorhabditis elegans
GN=ZC168.6 PE=1 SV=1
Length = 107
Score = 34.7 bits (78), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGII 59
++N+ P +P + + +T+++D +AFKVK++N + Y VRP G +
Sbjct: 1 MINVDPPTGNYP---ATGGNSTHNITSESDSRLAFKVKSSNNEHYRVRPVYGFV 51
>sp|Q94053|MSP78_CAEEL Major sperm protein 78 OS=Caenorhabditis elegans GN=msp-78 PE=2
SV=3
Length = 127
Score = 34.3 bits (77), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 4 GDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRT 63
GD+ +++ F + + +++ N + + + + +KTTN K+ V P G++ P+
Sbjct: 8 GDIQTQPGTKIVFNAPYDDKHTYHIKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 64 SCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKV 115
+ + V+ A D D+ + PDGA AK + F + DG V
Sbjct: 68 AVLLAVSCDAFAFGQEDTN-NDRITIEWTNTPDGA-AKQFRREWF-QGDGMV 116
>sp|Q23519|MS152_CAEEL Major sperm protein 152 OS=Caenorhabditis elegans GN=msp-152 PE=2
SV=3
Length = 127
Score = 33.9 bits (76), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 4 GDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRT 63
GD+ +++ F + + +++ N + + + + +KTTN K+ V P G++ P+
Sbjct: 8 GDIQTQPGTKIVFNAPYDDKHTYHIKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 64 SCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKV 115
+ + V+ A D D+ + PDGA AK + F + DG V
Sbjct: 68 AVLLAVSCDAFAFGQEDTN-NDRITVEWTNTPDGA-AKQFRREWF-QGDGMV 116
>sp|P53017|MSP19_CAEEL Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142
OS=Caenorhabditis elegans GN=msp-19 PE=1 SV=2
Length = 127
Score = 33.9 bits (76), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 4 GDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRT 63
GD+ +++ F + + +++ N + + + + +KTTN K+ V P G++ P+
Sbjct: 8 GDIQTQPGTKIVFNAPYDDKHTYHIKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 64 SCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKV 115
+ + V+ A D D+ + PDGA AK + F + DG V
Sbjct: 68 AVLLAVSCDAFAFGQEDTN-NDRITVEWTNTPDGA-AKQFRREWF-QGDGMV 116
>sp|P53018|MSP32_CAEEL Major sperm protein 32 OS=Caenorhabditis elegans GN=msp-32 PE=2
SV=1
Length = 190
Score = 33.9 bits (76), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 6 LVNIQP-SELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTS 64
++ QP +++ F + + +++ N + + + + +KTTN K+ V P G++ P+ +
Sbjct: 72 MIQTQPGTKIVFNAPYDDKHTYHIKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEA 131
Query: 65 CAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKV 115
+ V+ A D D+ + PDGA AK + F + DG V
Sbjct: 132 VLLAVSCDAFAFGQEDTN-NDRITVEWTNTPDGA-AKQFRREWF-QGDGMV 179
>sp|P05634|MSP10_CAEEL Major sperm protein 10/36/56/76 OS=Caenorhabditis elegans GN=msp-10
PE=2 SV=4
Length = 127
Score = 33.5 bits (75), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 4 GDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRT 63
GD+ +++ F + + +++ N + + + + +KTTN K+ V P G++ P+
Sbjct: 8 GDIQTQPNAKIVFNAPYDDKHTYHIKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 64 SCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKV 115
+ + V+ A D D+ + PDGA AK + F + DG V
Sbjct: 68 AVLLAVSCDAFAFGQEDTN-NDRITVEWTNTPDGA-AKQFRREWF-QGDGMV 116
>sp|Q21244|MSP63_CAEEL Major sperm protein 63 OS=Caenorhabditis elegans GN=msp-63 PE=2
SV=3
Length = 127
Score = 33.5 bits (75), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 4 GDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRT 63
GD+ +++ F + + +++ N + + + + +KTTN K+ V P G++ P+
Sbjct: 8 GDIQTQPGTKIVFNAPYDDKHTYRIKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 64 SCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKV 115
+ + V+ A D D+ + PDGA AK + F + DG V
Sbjct: 68 AVLLAVSCDAFAFGQEDTN-NDRITVEWTNTPDGA-AKQFRREWF-QGDGMV 116
>sp|P53019|MSP33_CAEEL Major sperm protein 33 OS=Caenorhabditis elegans GN=msp-33 PE=2
SV=2
Length = 127
Score = 33.5 bits (75), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 4 GDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRT 63
GD+ +++ F + + +++ N + + + + +KTTN K+ V P G++ P+
Sbjct: 8 GDIQTQPGTKIVFNAPYDDKHTYHIKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 64 SCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKV 115
+ + V+ A D D+ + PDGA AK + F + DG V
Sbjct: 68 AVFLAVSCDAFAFGQEDTN-NDRITVEWTNTPDGA-AKQFRREWF-QGDGMV 116
>sp|Q9XXL3|SSP31_CAEEL Sperm-specific class P protein 31 OS=Caenorhabditis elegans
GN=ssp-31 PE=1 SV=1
Length = 107
Score = 33.5 bits (75), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSC 65
++NI P +P S + + ++++ +AFKVK++N + Y VRP G + +
Sbjct: 1 MINIDPPSGDYP---ASGGSSTHYIVSESESRLAFKVKSSNNESYRVRPVYGFVDAKGKA 57
Query: 66 AVTVTMQA 73
+ V A
Sbjct: 58 KLEVNRLA 65
>sp|Q17856|MSP55_CAEEL Major sperm protein 55/57 OS=Caenorhabditis elegans GN=msp-55 PE=2
SV=3
Length = 127
Score = 33.1 bits (74), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 4 GDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRT 63
GD+ +++ F + + +++ N + + + + +KTTN K+ V P G++ P+
Sbjct: 8 GDIQTQPGTKIVFNAPYDDKHTYHIKVINSSARRIVYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 64 SCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKV 115
+ + V+ A D D+ + PDGA AK + F + DG V
Sbjct: 68 AVLLAVSCDAFAFGQEDTN-NDRITVEWTNTPDGA-AKQFRREWF-QGDGMV 116
>sp|Q9TVW5|MSP77_CAEEL Major sperm protein 77/79 OS=Caenorhabditis elegans GN=msp-77 PE=2
SV=3
Length = 127
Score = 33.1 bits (74), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 4 GDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRT 63
GD+ +++ F + + +++ N + + + + +KTTN K+ V P G++ P+
Sbjct: 8 GDIQTQPGTKIVFNAPYDDKHTYHIKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 64 SCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGA 98
+ + V+ A D D+ + PDGA
Sbjct: 68 AVLLAVSCDAFAFGQEDTN-NDRITVEWTNTPDGA 101
>sp|Q19832|MSP3_CAEEL Major sperm protein 3 OS=Caenorhabditis elegans GN=msp-3 PE=2 SV=3
Length = 127
Score = 33.1 bits (74), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 4 GDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRT 63
GD+ +++ F + + +++ N + + + + +KTTN K+ V P G++ P+
Sbjct: 8 GDIQTQPGTKIVFNAPYDDKHTYHIKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 64 SCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGA 98
+ + V+ A D D+ + PDGA
Sbjct: 68 AVLLAVSCDAFAFGQEDTN-NDRITVEWTNTPDGA 101
>sp|P53023|MSP3_GLORO Major sperm protein 3 OS=Globodera rostochiensis GN=MSP-3 PE=2
SV=2
Length = 126
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 34/69 (49%)
Query: 5 DLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTS 64
D+ + ++ F +++ +++ N K + F KTT PK+ + P G++ P+ S
Sbjct: 8 DIATMPAQKVVFNAPFDNKATYYVRIINPGTKRIGFAFKTTKPKRINMNPPNGVLGPKES 67
Query: 65 CAVTVTMQA 73
V ++ A
Sbjct: 68 VNVAISCDA 76
>sp|O45433|SSP32_CAEEL Sperm-specific class P protein 32 OS=Caenorhabditis elegans
GN=ssp-32 PE=2 SV=1
Length = 107
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPR 62
++ I+P FP S + +T+ + +AFKVK++N + Y VRP G + R
Sbjct: 1 MLTIEPPSATFP---ASGGSSTHTITSVNESRMAFKVKSSNNEHYRVRPVYGFVEAR 54
>sp|P53021|MSP1_GLORO Major sperm protein 1 OS=Globodera rostochiensis GN=MSP-1 PE=2
SV=2
Length = 126
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 34/69 (49%)
Query: 5 DLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTS 64
D+ + ++ F +++ +++ N K + F KTT PK+ + P G++ P+ S
Sbjct: 8 DIATMPAQKVVFNAPFDNKATYYVRIINPGTKRIGFAFKTTKPKRINMNPPNGVLGPKES 67
Query: 65 CAVTVTMQA 73
V ++ A
Sbjct: 68 VNVAISCDA 76
>sp|P53022|MSP2_GLORO Major sperm protein 2 OS=Globodera rostochiensis GN=MSP-2 PE=2
SV=2
Length = 126
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 34/70 (48%)
Query: 4 GDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRT 63
GD+ + ++ F +++ +++ N + F KTT PK+ + P G++ P+
Sbjct: 7 GDIATMPNQKVVFNAPFDNKATYYVRVINPGTNRIGFAFKTTKPKRINMNPPNGVLGPKE 66
Query: 64 SCAVTVTMQA 73
S V ++ A
Sbjct: 67 SVNVAISCDA 76
>sp|P53020|MSP38_CAEEL Major sperm protein 38 OS=Caenorhabditis elegans GN=msp-38 PE=2
SV=2
Length = 127
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 4 GDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRT 63
GD+ +++ F + + +++ N + + + + +KTTN K+ V P G+ P+
Sbjct: 8 GDIQTQPGTKIVFNAPYDDKHTDHIKVINSSARRIGYGIKTTNMKRLGVDPPCGVFDPKE 67
Query: 64 SCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKV 115
+ + V+ A D D+ + PDGA AK + F + DG V
Sbjct: 68 AVLLAVSCDAFAFGQEDTN-NDRITVEWTNTPDGA-AKQFRREWF-QGDGMV 116
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.130 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,238,115
Number of Sequences: 539616
Number of extensions: 2974664
Number of successful extensions: 6406
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 6337
Number of HSP's gapped (non-prelim): 74
length of query: 180
length of database: 191,569,459
effective HSP length: 110
effective length of query: 70
effective length of database: 132,211,699
effective search space: 9254818930
effective search space used: 9254818930
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)