BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030260
(180 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Q2L|A Chain A, Crystal Structure Of Superoxide Dismutase From P.
Atrosanguina
pdb|2Q2L|B Chain B, Crystal Structure Of Superoxide Dismutase From P.
Atrosanguina
Length = 152
Score = 166 bits (419), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 80/122 (65%), Positives = 94/122 (77%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++S + V G++ F Q +G T V G I+GLKPGLHGFH+HALGDTTNGC STGPHFNP
Sbjct: 7 VLSSSEGVAGTILFTQEGDGPTTVTGNISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPA 66
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLG 134
K+HG+P D RH GDLGNI G DG A +I D+ IPL+G HSI+GRAVVVHADPDDLG
Sbjct: 67 GKEHGSPEDETRHAGDLGNITVGDDGTACFTIVDKQIPLTGPHSIIGRAVVVHADPDDLG 126
Query: 135 KG 136
KG
Sbjct: 127 KG 128
>pdb|3GTT|A Chain A, Mouse Sod1
pdb|3GTT|B Chain B, Mouse Sod1
pdb|3GTT|C Chain C, Mouse Sod1
pdb|3GTT|D Chain D, Mouse Sod1
pdb|3GTT|E Chain E, Mouse Sod1
pdb|3GTT|F Chain F, Mouse Sod1
Length = 153
Score = 148 bits (374), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 87/123 (70%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHV-KGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G++HF Q +G V G+ITGL G HGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
K HG P+D ERH GDLGN+ AG DGVA VSI DR+I LSG+HSI+GR +VVH DDL
Sbjct: 67 HSKKHGGPADEERHVGDLGNVTAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|1SRD|A Chain A, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|B Chain B, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|C Chain C, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|D Chain D, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
Length = 154
Score = 148 bits (374), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 89/122 (72%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G ++V+G + Q +G T V +I+GL PG HGFH+H GDTTNGC STGPHFNP
Sbjct: 8 VLKGTSNVEGVVTLTQEDDGPTTVNVRISGLAPGKHGFHLHEFGDTTNGCMSTGPHFNPD 67
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLG 134
KK HGAP D RH GDLGNIVA DGVAE +I D IPL+G +S++GRA+VVH DDLG
Sbjct: 68 KKTHGAPEDEVRHAGDLGNIVANTDGVAEATIVDNQIPLTGPNSVVGRALVVHELEDDLG 127
Query: 135 KG 136
KG
Sbjct: 128 KG 129
>pdb|3GTV|A Chain A, Human-Mouse Sod1 Chimera
pdb|3GTV|B Chain B, Human-Mouse Sod1 Chimera
pdb|3GTV|C Chain C, Human-Mouse Sod1 Chimera
pdb|3GTV|D Chain D, Human-Mouse Sod1 Chimera
pdb|3GTV|E Chain E, Human-Mouse Sod1 Chimera
pdb|3GTV|F Chain F, Human-Mouse Sod1 Chimera
pdb|3GTV|G Chain G, Human-Mouse Sod1 Chimera
pdb|3GTV|H Chain H, Human-Mouse Sod1 Chimera
pdb|3GTV|I Chain I, Human-Mouse Sod1 Chimera
pdb|3GTV|J Chain J, Human-Mouse Sod1 Chimera
pdb|3GTV|K Chain K, Human-Mouse Sod1 Chimera
pdb|3GTV|L Chain L, Human-Mouse Sod1 Chimera
Length = 153
Score = 147 bits (372), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 85/123 (69%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ AG DGVA VSI DR+I LSG+HSI+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|3KM1|A Chain A, Zinc-Reconstituted Tomato Chloroplast Superoxide Dismutase
pdb|3KM1|B Chain B, Zinc-Reconstituted Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|A Chain A, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|B Chain B, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|C Chain C, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|D Chain D, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|E Chain E, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|F Chain F, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|G Chain G, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|H Chain H, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|I Chain I, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|J Chain J, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|K Chain K, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|L Chain L, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|M Chain M, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|N Chain N, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|O Chain O, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|P Chain P, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|Q Chain Q, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|R Chain R, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|S Chain S, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|T Chain T, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|U Chain U, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|V Chain V, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|W Chain W, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|X Chain X, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3MKG|A Chain A, Low Ph As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3MKG|B Chain B, Low Ph As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3PU7|A Chain A, Cu-Zn Tomato Chloroplast Superoxide Dismutase
pdb|3PU7|B Chain B, Cu-Zn Tomato Chloroplast Superoxide Dismutase
pdb|3HOG|A Chain A, Metal-Free Tomato Chloroplast Superoxide Dismutase
pdb|3S0P|A Chain A, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|B Chain B, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|C Chain C, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|D Chain D, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|E Chain E, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|F Chain F, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|G Chain G, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|H Chain H, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
Length = 154
Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 89/122 (72%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G ++V+G + Q +G T V +ITGL PGLHGFH+H GDTTNGC STG HFNP
Sbjct: 8 VLKGNSNVEGVVTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTGAHFNPN 67
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLG 134
K HGAP D RH GDLGNIVA DGVAEV++ D IPL+G +S++GRA+VVH DDLG
Sbjct: 68 KLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHELEDDLG 127
Query: 135 KG 136
KG
Sbjct: 128 KG 129
>pdb|3MND|A Chain A, Crystallographic Analysis Of The Cystosolic CuZN
SUPEROXIDE DISMUTASE From Taenia Solium
pdb|3MND|B Chain B, Crystallographic Analysis Of The Cystosolic CuZN
SUPEROXIDE DISMUTASE From Taenia Solium
Length = 152
Score = 144 bits (363), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 89/130 (68%), Gaps = 2/130 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G VKG +HF Q + V V + GLKPG HGFH+H GDTT GC S G HFNP
Sbjct: 6 VMRGEEGVKGVVHFTQAGDAVK-VHAEFEGLKPGKHGFHVHEFGDTTQGCTSAGAHFNPH 64
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLG 134
K+HGAP ERH GDLGN+ AG DG A + + D+MI L+G+HS++GR++V+H DPDDLG
Sbjct: 65 GKNHGAPDAAERHVGDLGNVTAGADGKATLDLTDKMISLTGEHSVIGRSLVIHVDPDDLG 124
Query: 135 KGKFSSLSLI 144
G LSLI
Sbjct: 125 LGGH-ELSLI 133
>pdb|1TO4|A Chain A, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|B Chain B, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|C Chain C, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|D Chain D, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|A Chain A, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|B Chain B, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|C Chain C, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|D Chain D, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
Length = 156
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 88/123 (71%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
+++G VKG + F Q NG HV + +GLK G HGFH+H GDTTNGC S G HFNP
Sbjct: 9 VMTGTAGVKGVVKFTQETDNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSAGAHFNP 68
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
K++HGAP D+ RH GDLGN+VAG DG A + D++I L+G HSI+GR++V+H + DDL
Sbjct: 69 TKQEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRSMVIHENEDDL 128
Query: 134 GKG 136
G+G
Sbjct: 129 GRG 131
>pdb|1N19|A Chain A, Structure Of The Hsod A4v Mutant
pdb|1N19|B Chain B, Structure Of The Hsod A4v Mutant
Length = 154
Score = 142 bits (357), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG HSI+GR +VVH DDL
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDL 127
Query: 134 GKG 136
GKG
Sbjct: 128 GKG 130
>pdb|1SOS|A Chain A, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|F Chain F, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|B Chain B, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|G Chain G, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|C Chain C, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|H Chain H, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|D Chain D, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|I Chain I, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|E Chain E, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|J Chain J, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
Length = 154
Score = 142 bits (357), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG HSI+GR +VVH DDL
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDL 127
Query: 134 GKG 136
GKG
Sbjct: 128 GKG 130
>pdb|1L3N|A Chain A, The Solution Structure Of Reduced Dimeric Copper Zinc Sod:
The Structural Effects Of Dimerization
pdb|1L3N|B Chain B, The Solution Structure Of Reduced Dimeric Copper Zinc Sod:
The Structural Effects Of Dimerization
pdb|2AF2|A Chain A, Solution Structure Of Disulfide Reduced And Copper
Depleted Human Superoxide Dismutase
pdb|2AF2|B Chain B, Solution Structure Of Disulfide Reduced And Copper
Depleted Human Superoxide Dismutase
pdb|2LU5|A Chain A, Structure And Chemical Shifts Of Cu(I),Zn(Ii) Superoxide
Dismutase By Solid-State Nmr
Length = 153
Score = 142 bits (357), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG HSI+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|1FUN|A Chain A, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|F Chain F, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|B Chain B, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|G Chain G, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|C Chain C, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|H Chain H, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|D Chain D, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|I Chain I, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|E Chain E, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|J Chain J, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
Length = 153
Score = 142 bits (357), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG HSI+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|1N18|A Chain A, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|B Chain B, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|C Chain C, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|D Chain D, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|E Chain E, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|F Chain F, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|G Chain G, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|H Chain H, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|I Chain I, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|J Chain J, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
Length = 154
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG HSI+GR +VVH DDL
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDL 127
Query: 134 GKG 136
GKG
Sbjct: 128 GKG 130
>pdb|1E9P|B Chain B, Crystal Structure Of Bovine Cu, Zn Sod To 1.7 Angstrom (3
Of 3)
Length = 151
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 86/122 (70%), Gaps = 1/122 (0%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++SG V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 7 VLSGDGPVQGTIHFEASGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 65
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLG 134
K HG PSD+ERH GDLGN+ A +GVA V I D +I LSG++SI+GR +VVH PDDLG
Sbjct: 66 SKKHGGPSDDERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLG 125
Query: 135 KG 136
+G
Sbjct: 126 RG 127
>pdb|3LTV|A Chain A, Mouse-Human Sod1 Chimera
pdb|3LTV|B Chain B, Mouse-Human Sod1 Chimera
pdb|3LTV|C Chain C, Mouse-Human Sod1 Chimera
pdb|3LTV|D Chain D, Mouse-Human Sod1 Chimera
pdb|3LTV|E Chain E, Mouse-Human Sod1 Chimera
pdb|3LTV|F Chain F, Mouse-Human Sod1 Chimera
Length = 153
Score = 141 bits (355), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 84/123 (68%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHV-KGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G++HF Q +G V G+ITGL G HGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
K HG P+D ERH GDLGN+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 67 HSKKHGGPADEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|1E9P|A Chain A, Crystal Structure Of Bovine Cu, Zn Sod To 1.7 Angstrom (3
Of 3)
Length = 151
Score = 140 bits (354), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++SG V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 7 VLSGDGPVQGTIHFEAKGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 65
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLG 134
K HG PSD ERH GDLGN+ A +GVA V I D +I LSG++SI+GR +VVH PDDLG
Sbjct: 66 SKKHGGPSDEERHVGDLGNVTADSNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLG 125
Query: 135 KG 136
+G
Sbjct: 126 RG 127
>pdb|2GBT|A Chain A, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|B Chain B, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|C Chain C, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|D Chain D, C6aC111A CUZN SUPEROXIDE DISMUTASE
Length = 153
Score = 140 bits (354), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H+I+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|4B3E|A Chain A, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|B Chain B, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|C Chain C, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|D Chain D, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|E Chain E, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|F Chain F, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|G Chain G, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|H Chain H, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|I Chain I, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|J Chain J, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate
Length = 154
Score = 140 bits (352), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 127
Query: 134 GKG 136
GKG
Sbjct: 128 GKG 130
>pdb|1HL4|A Chain A, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|B Chain B, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|C Chain C, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|D Chain D, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1SPD|A Chain A, Amyotrophic Lateral Sclerosis And Structural Defects In
Cu,Zn Superoxide Dismutase
pdb|1SPD|B Chain B, Amyotrophic Lateral Sclerosis And Structural Defects In
Cu,Zn Superoxide Dismutase
Length = 154
Score = 140 bits (352), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 127
Query: 134 GKG 136
GKG
Sbjct: 128 GKG 130
>pdb|1OZU|A Chain A, Crystal Structure Of Familial Als Mutant S134n Of Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 1.3a Resolution
pdb|1OZU|B Chain B, Crystal Structure Of Familial Als Mutant S134n Of Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 1.3a Resolution
Length = 153
Score = 140 bits (352), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|1HL5|A Chain A, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|B Chain B, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|C Chain C, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|D Chain D, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|E Chain E, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|F Chain F, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|G Chain G, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|H Chain H, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|I Chain I, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|J Chain J, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|K Chain K, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|L Chain L, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|M Chain M, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|N Chain N, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|O Chain O, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|P Chain P, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|Q Chain Q, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|S Chain S, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1PU0|A Chain A, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|B Chain B, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|C Chain C, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|D Chain D, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|E Chain E, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|F Chain F, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|G Chain G, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|H Chain H, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|I Chain I, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|J Chain J, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|2C9U|A Chain A, 1.24 Angstroms Resolution Structure Of As-Isolated Cu-Zn
Human Superoxide Dismutase
pdb|2C9U|F Chain F, 1.24 Angstroms Resolution Structure Of As-Isolated Cu-Zn
Human Superoxide Dismutase
pdb|2C9V|A Chain A, Atomic Resolution Structure Of Cu-Zn Human Superoxide
Dismutase
pdb|2C9V|F Chain F, Atomic Resolution Structure Of Cu-Zn Human Superoxide
Dismutase
pdb|2V0A|A Chain A, Atomic Resolution Crystal Structure Of Human Superoxide
Dismutase
pdb|2V0A|F Chain F, Atomic Resolution Crystal Structure Of Human Superoxide
Dismutase
pdb|3ECU|A Chain A, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|B Chain B, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|C Chain C, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|D Chain D, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3KH3|A Chain A, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|B Chain B, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|C Chain C, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|D Chain D, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|E Chain E, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|F Chain F, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|G Chain G, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|H Chain H, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|I Chain I, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|J Chain J, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|K Chain K, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|L Chain L, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH4|A Chain A, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|B Chain B, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|C Chain C, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|D Chain D, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|E Chain E, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|F Chain F, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3RE0|A Chain A, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|B Chain B, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|C Chain C, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|D Chain D, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
Length = 153
Score = 140 bits (352), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|1UXM|A Chain A, A4v Mutant Of Human Sod1
pdb|1UXM|B Chain B, A4v Mutant Of Human Sod1
pdb|1UXM|C Chain C, A4v Mutant Of Human Sod1
pdb|1UXM|D Chain D, A4v Mutant Of Human Sod1
pdb|1UXM|E Chain E, A4v Mutant Of Human Sod1
pdb|1UXM|F Chain F, A4v Mutant Of Human Sod1
pdb|1UXM|G Chain G, A4v Mutant Of Human Sod1
pdb|1UXM|H Chain H, A4v Mutant Of Human Sod1
pdb|1UXM|I Chain I, A4v Mutant Of Human Sod1
pdb|1UXM|J Chain J, A4v Mutant Of Human Sod1
pdb|1UXM|K Chain K, A4v Mutant Of Human Sod1
pdb|1UXM|L Chain L, A4v Mutant Of Human Sod1
Length = 153
Score = 140 bits (352), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|3GZQ|A Chain A, Human Sod1 A4v Metal-Free Variant
pdb|3GZQ|B Chain B, Human Sod1 A4v Metal-Free Variant
Length = 154
Score = 140 bits (352), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 127
Query: 134 GKG 136
GKG
Sbjct: 128 GKG 130
>pdb|2C9S|A Chain A, 1.24 Angstroms Resolution Structure Of Zn-Zn Human
Superoxide Dismutase
pdb|2C9S|F Chain F, 1.24 Angstroms Resolution Structure Of Zn-Zn Human
Superoxide Dismutase
pdb|3T5W|A Chain A, 2me Modified Human Sod1
pdb|3T5W|B Chain B, 2me Modified Human Sod1
pdb|3T5W|D Chain D, 2me Modified Human Sod1
pdb|3T5W|E Chain E, 2me Modified Human Sod1
pdb|3T5W|F Chain F, 2me Modified Human Sod1
pdb|3T5W|G Chain G, 2me Modified Human Sod1
pdb|3T5W|H Chain H, 2me Modified Human Sod1
pdb|3T5W|I Chain I, 2me Modified Human Sod1
pdb|3T5W|J Chain J, 2me Modified Human Sod1
pdb|3T5W|K Chain K, 2me Modified Human Sod1
pdb|3T5W|L Chain L, 2me Modified Human Sod1
pdb|3T5W|M Chain M, 2me Modified Human Sod1
Length = 153
Score = 140 bits (352), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|1PTZ|A Chain A, Crystal Structure Of The Human Cu, Zn Superoxide
Dismutase, Familial Amyotrophic Lateral Sclerosis (Fals)
Mutant H43r
pdb|1PTZ|B Chain B, Crystal Structure Of The Human Cu, Zn Superoxide
Dismutase, Familial Amyotrophic Lateral Sclerosis (Fals)
Mutant H43r
Length = 153
Score = 139 bits (350), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GL GFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLRGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG HSI+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|1E9O|A Chain A, Crystal Structure Of Bovine Sod - 1 Of 3
Length = 152
Score = 139 bits (350), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++SG V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 8 VLSGDGPVQGTIHFEAKGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 66
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLG 134
K HG P D ERH GDLGN+ A +GVA V I D +I LSG++SI+GR +VVH PDDLG
Sbjct: 67 SKKHGGPKDEERHVGDLGNVTADSNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLG 126
Query: 135 KG 136
+G
Sbjct: 127 RG 128
>pdb|1E9Q|A Chain A, Crystal Structure Of Bovine Cu Zn Sod-(1 Of 3)
Length = 151
Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++SG V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 7 VLSGDGPVQGTIHFEAKGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 65
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLG 134
K HG P D ERH GDLGN+ A +GVA V I D +I LSG++SI+GR +VVH PDDLG
Sbjct: 66 SKKHGGPKDEERHVGDLGNVTADSNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLG 125
Query: 135 KG 136
+G
Sbjct: 126 RG 127
>pdb|1UXL|A Chain A, I113t Mutant Of Human Sod1
pdb|1UXL|B Chain B, I113t Mutant Of Human Sod1
pdb|1UXL|C Chain C, I113t Mutant Of Human Sod1
pdb|1UXL|D Chain D, I113t Mutant Of Human Sod1
pdb|1UXL|E Chain E, I113t Mutant Of Human Sod1
pdb|1UXL|F Chain F, I113t Mutant Of Human Sod1
pdb|1UXL|G Chain G, I113t Mutant Of Human Sod1
pdb|1UXL|H Chain H, I113t Mutant Of Human Sod1
pdb|1UXL|I Chain I, I113t Mutant Of Human Sod1
pdb|1UXL|J Chain J, I113t Mutant Of Human Sod1
pdb|3ECV|A Chain A, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|B Chain B, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|C Chain C, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|D Chain D, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|4A7G|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 4-
Methylpiperazin-1-Yl)quinazoline In The P21 Space Group.
pdb|4A7Q|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 4-(4-
Methyl-1,4-Diazepan-1-Yl)quinazoline In The P21 Space
Group.
pdb|4A7Q|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 4-(4-
Methyl-1,4-Diazepan-1-Yl)quinazoline In The P21 Space
Group.
pdb|4A7S|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 5-
Fluorouridine In The P21 Space Group
pdb|4A7S|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 5-
Fluorouridine In The P21 Space Group
pdb|4A7T|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With
Isoproteranol In The P21 Space Group
pdb|4A7T|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With
Isoproteranol In The P21 Space Group
pdb|4A7U|A Chain A, Structure Of Human I113t Sod1 Complexed With Adrenaline In
The P21 Space Group.
pdb|4A7U|F Chain F, Structure Of Human I113t Sod1 Complexed With Adrenaline In
The P21 Space Group.
pdb|4A7V|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With
Dopamine In The P21 Space Group
pdb|4A7V|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With
Dopamine In The P21 Space Group
Length = 153
Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H I GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCITGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|2WYT|A Chain A, 1.0 A Resolution Structure Of L38v Sod1 Mutant
pdb|2WYT|F Chain F, 1.0 A Resolution Structure Of L38v Sod1 Mutant
pdb|2WZ0|A Chain A, L38v Sod1 Mutant Complexed With Aniline.
pdb|2WZ0|F Chain F, L38v Sod1 Mutant Complexed With Aniline.
pdb|2WZ5|A Chain A, L38v Sod1 Mutant Complexed With L-Methionine.
pdb|2WZ5|F Chain F, L38v Sod1 Mutant Complexed With L-Methionine
Length = 153
Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I G+ GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGVTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|2WYZ|A Chain A, L38v Sod1 Mutant Complexed With Ump
pdb|2WYZ|F Chain F, L38v Sod1 Mutant Complexed With Ump
Length = 153
Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I G+ GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGVTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|1DSW|A Chain A, The Solution Structure Of A Monomeric, Reduced Form Of
Human Copper, Zinc Superoxide Dismutase Bearing The Same
Charge As The Native Protein
Length = 153
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H D T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG HSI+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|1MFM|A Chain A, Monomeric Human Sod Mutant F50eG51EE133Q AT ATOMIC
Resolution
pdb|1KMG|A Chain A, The Solution Structure Of Monomeric Copper-Free Superoxide
Dismutase
pdb|1RK7|A Chain A, Solution Structure Of Apo Cu,Zn Superoxide Dismutase: Role
Of Metal Ions In Protein Folding
Length = 153
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H D T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG HSI+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|3GZP|A Chain A, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|B Chain B, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|C Chain C, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|D Chain D, Human Sod1 G93a Metal-Free Variant
pdb|2WZ6|A Chain A, G93a Sod1 Mutant Complexed With Quinazoline.
pdb|2WZ6|F Chain F, G93a Sod1 Mutant Complexed With Quinazoline
Length = 153
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A D VA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|3GZO|A Chain A, Human Sod1 G93a Variant
pdb|3GZO|B Chain B, Human Sod1 G93a Variant
pdb|3GZO|C Chain C, Human Sod1 G93a Variant
pdb|3GZO|D Chain D, Human Sod1 G93a Variant
pdb|3GZO|E Chain E, Human Sod1 G93a Variant
pdb|3GZO|F Chain F, Human Sod1 G93a Variant
pdb|3GZO|G Chain G, Human Sod1 G93a Variant
pdb|3GZO|H Chain H, Human Sod1 G93a Variant
pdb|3GZO|I Chain I, Human Sod1 G93a Variant
pdb|3GZO|J Chain J, Human Sod1 G93a Variant
pdb|2WKO|A Chain A, Structure Of Metal Loaded Pathogenic Sod1 Mutant G93a
Length = 154
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A D VA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 127
Query: 134 GKG 136
GKG
Sbjct: 128 GKG 130
>pdb|1BA9|A Chain A, The Solution Structure Of Reduced Monomeric Superoxide
Dismutase, Nmr, 36 Structures
Length = 153
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H D T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG HSI+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|1XSO|A Chain A, Three-Dimensional Structure Of Xenopus Laevis Cu,Zn
Superoxide Dismutase B Determined By X-Ray
Crystallography At 1.5 Angstroms Resolution
pdb|1XSO|B Chain B, Three-Dimensional Structure Of Xenopus Laevis Cu,Zn
Superoxide Dismutase B Determined By X-Ray
Crystallography At 1.5 Angstroms Resolution
Length = 150
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 82/122 (67%), Gaps = 1/122 (0%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
+++G+ VKG +HF Q G V+GKI GL GLHGFHIH GD TNGC S G HFNP
Sbjct: 6 VLAGSGDVKGVVHFEQQDEGAVSVEGKIEGLTDGLHGFHIHVFGDNTNGCMSAGSHFNPE 65
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLG 134
K+HGAP D +RH GDLGN+ A GVA+ I D +I L G +SI+GR VVH DDLG
Sbjct: 66 NKNHGAPGDTDRHVGDLGNVTA-EGGVAQFKITDSLISLKGPNSIIGRTAVVHEKADDLG 124
Query: 135 KG 136
KG
Sbjct: 125 KG 126
>pdb|2WKO|F Chain F, Structure Of Metal Loaded Pathogenic Sod1 Mutant G93a
Length = 154
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A D VA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHXIIGRTLVVHEKADDL 127
Query: 134 GKG 136
GKG
Sbjct: 128 GKG 130
>pdb|3ECW|A Chain A, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|B Chain B, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|C Chain C, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|D Chain D, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
Length = 153
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNRAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|1OEZ|W Chain W, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|X Chain X, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|Y Chain Y, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|Z Chain Z, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OZT|M Chain M, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|N Chain N, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|G Chain G, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|H Chain H, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|K Chain K, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|L Chain L, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|I Chain I, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|J Chain J, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
Length = 153
Score = 137 bits (346), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGF +H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|3H2Q|A Chain A, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|B Chain B, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|C Chain C, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|D Chain D, Human Sod1 H80r Variant, P21 Crystal Form
Length = 153
Score = 137 bits (346), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ER GDLGN+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERRVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|2ZKY|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|C Chain C, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|D Chain D, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|E Chain E, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|F Chain F, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|G Chain G, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|H Chain H, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|I Chain I, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|J Chain J, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
Length = 159
Score = 137 bits (346), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 13 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 72
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A D VA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 73 LSRKHGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 132
Query: 134 GKG 136
GKG
Sbjct: 133 GKG 135
>pdb|1E9O|B Chain B, Crystal Structure Of Bovine Sod - 1 Of 3
Length = 152
Score = 137 bits (346), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 8 VLKGDGPVQGTIHFEAKGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 66
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLG 134
K HG P D+ERH GDLGN+ A +GVA V I D +I LSG++SI+GR +VVH PDDLG
Sbjct: 67 SKKHGGPKDDERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLG 126
Query: 135 KG 136
+G
Sbjct: 127 RG 128
>pdb|1CB4|A Chain A, Crystal Structure Of Copper, Zinc Superoxide Dismutase
pdb|1CB4|B Chain B, Crystal Structure Of Copper, Zinc Superoxide Dismutase
Length = 151
Score = 137 bits (346), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 7 VLKGDGPVQGTIHFEAKGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 65
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLG 134
K HG P D+ERH GDLGN+ A +GVA V I D +I LSG++SI+GR +VVH PDDLG
Sbjct: 66 SKKHGGPKDDERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLG 125
Query: 135 KG 136
+G
Sbjct: 126 RG 127
>pdb|1E9Q|B Chain B, Crystal Structure Of Bovine Cu Zn Sod-(1 Of 3)
Length = 151
Score = 137 bits (346), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 7 VLKGDGPVQGTIHFEAKGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 65
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLG 134
K HG P D+ERH GDLGN+ A +GVA V I D +I LSG++SI+GR +VVH PDDLG
Sbjct: 66 SKKHGGPKDDERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLG 125
Query: 135 KG 136
+G
Sbjct: 126 RG 127
>pdb|3QQD|A Chain A, Human Sod1 H80r Variant, P212121 Crystal Form
pdb|3QQD|B Chain B, Human Sod1 H80r Variant, P212121 Crystal Form
Length = 154
Score = 137 bits (346), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ER GDLGN+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 68 LSRKHGGPKDEERRVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDL 127
Query: 134 GKG 136
GKG
Sbjct: 128 GKG 130
>pdb|2GBU|A Chain A, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|B Chain B, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|C Chain C, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|D Chain D, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBV|A Chain A, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|B Chain B, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|C Chain C, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|D Chain D, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|E Chain E, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|F Chain F, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|G Chain G, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|H Chain H, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|I Chain I, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|J Chain J, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
Length = 153
Score = 137 bits (345), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T G S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGATSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H+I+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|2VR7|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.58 A Resolution
pdb|2VR7|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.58 A Resolution
Length = 154
Score = 137 bits (345), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDL N+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 68 LSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 127
Query: 134 GKG 136
GKG
Sbjct: 128 GKG 130
>pdb|2VR6|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.3 A Resolution
pdb|2VR6|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.3 A Resolution
pdb|3CQP|A Chain A, Human Sod1 G85r Variant, Structure I
pdb|3CQP|B Chain B, Human Sod1 G85r Variant, Structure I
pdb|3CQP|C Chain C, Human Sod1 G85r Variant, Structure I
pdb|3CQP|D Chain D, Human Sod1 G85r Variant, Structure I
Length = 153
Score = 137 bits (345), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDL N+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|1AZV|A Chain A, Familial Als Mutant G37r Cuznsod (Human)
pdb|1AZV|B Chain B, Familial Als Mutant G37r Cuznsod (Human)
Length = 153
Score = 137 bits (345), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I L GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKRLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|3SOD|O Chain O, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|Y Chain Y, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|G Chain G, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|B Chain B, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
Length = 152
Score = 137 bits (345), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 83/122 (68%), Gaps = 1/122 (0%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 8 VLKGDGPVQGTIHFEAKGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 66
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLG 134
K HG P D ERH GDLGN+ A +GVA V I D +I LSG++SI+GR +VVH PDDLG
Sbjct: 67 SKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLG 126
Query: 135 KG 136
+G
Sbjct: 127 RG 128
>pdb|2XJK|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase
Length = 153
Score = 137 bits (345), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H D T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H+I+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|1Q0E|A Chain A, Atomic Resolution (1.15 ) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase
pdb|1Q0E|B Chain B, Atomic Resolution (1.15 ) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase
pdb|2SOD|O Chain O, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|Y Chain Y, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|B Chain B, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|G Chain G, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
Length = 152
Score = 137 bits (345), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 83/122 (68%), Gaps = 1/122 (0%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 8 VLKGDGPVQGTIHFEAKGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 66
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLG 134
K HG P D ERH GDLGN+ A +GVA V I D +I LSG++SI+GR +VVH PDDLG
Sbjct: 67 SKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLG 126
Query: 135 KG 136
+G
Sbjct: 127 RG 128
>pdb|1COB|A Chain A, Crystal Structure Solution And Refinement Of The
Semisynthetic Cobalt Substituted Bovine Erythrocyte
Enzyme Superoxide Dismutase At 2.0 Angstroms Resolution
pdb|1COB|B Chain B, Crystal Structure Solution And Refinement Of The
Semisynthetic Cobalt Substituted Bovine Erythrocyte
Enzyme Superoxide Dismutase At 2.0 Angstroms Resolution
pdb|1SXA|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXA|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXB|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXB|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXC|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXC|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXN|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0
pdb|1SXN|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0
pdb|1SXS|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Thiocyanate
pdb|1SXS|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Thiocyanate
pdb|1SXZ|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Azide
pdb|1SXZ|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Azide
pdb|1CBJ|A Chain A, Crystal Structure Of Bovine Superoxide Dismutase Crystal.
pdb|1CBJ|B Chain B, Crystal Structure Of Bovine Superoxide Dismutase Crystal.
pdb|2AEO|A Chain A, Crystal Structure Of Cisplatinated Bovine Cu,Zn Superoxide
Dismutase
pdb|2AEO|B Chain B, Crystal Structure Of Cisplatinated Bovine Cu,Zn Superoxide
Dismutase
pdb|2Z7U|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7U|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7W|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7W|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Y|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Y|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Z|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Z|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2ZOW|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2ZOW|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|3HW7|A Chain A, High Pressure (0.57 Gpa) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase At 2.0 Angstroms
pdb|3HW7|B Chain B, High Pressure (0.57 Gpa) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase At 2.0 Angstroms
Length = 151
Score = 137 bits (345), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 83/122 (68%), Gaps = 1/122 (0%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 7 VLKGDGPVQGTIHFEAKGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 65
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLG 134
K HG P D ERH GDLGN+ A +GVA V I D +I LSG++SI+GR +VVH PDDLG
Sbjct: 66 SKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLG 125
Query: 135 KG 136
+G
Sbjct: 126 RG 127
>pdb|4A7G|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 4-
Methylpiperazin-1-Yl)quinazoline In The P21 Space Group
Length = 153
Score = 137 bits (344), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VS D +I LSG H I GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSTEDSVISLSGDHCITGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|2VR8|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.36 A Resolution
pdb|2VR8|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.36 A Resolution
Length = 154
Score = 137 bits (344), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDL N+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 68 LSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDL 127
Query: 134 GKG 136
GKG
Sbjct: 128 GKG 130
>pdb|3CQQ|A Chain A, Human Sod1 G85r Variant, Structure Ii
pdb|3CQQ|B Chain B, Human Sod1 G85r Variant, Structure Ii
Length = 153
Score = 137 bits (344), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDL N+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|2ZKW|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group P21
pdb|2ZKW|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group P21
pdb|2ZKX|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|C Chain C, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|D Chain D, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
Length = 159
Score = 137 bits (344), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 13 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 72
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDL N+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 73 LSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 132
Query: 134 GKG 136
GKG
Sbjct: 133 GKG 135
>pdb|2R27|A Chain A, Constitutively Zinc-Deficient Mutant Of Human Superoxide
Dismutase (Sod), C6a, H80s, H83s, C111s
pdb|2R27|B Chain B, Constitutively Zinc-Deficient Mutant Of Human Superoxide
Dismutase (Sod), C6a, H80s, H83s, C111s
Length = 154
Score = 137 bits (344), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ER G LGN+ A DGVA+VSI D +I LSG HSI+GR +VVH DDL
Sbjct: 68 LSRKHGGPKDEERSVGSLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDL 127
Query: 134 GKG 136
GKG
Sbjct: 128 GKG 130
>pdb|1P1V|A Chain A, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
pdb|1P1V|B Chain B, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
pdb|1P1V|C Chain C, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
Length = 153
Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H I+GR +VVH D L
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADHL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|3H2P|A Chain A, Human Sod1 D124v Variant
pdb|3H2P|B Chain B, Human Sod1 D124v Variant
Length = 153
Score = 136 bits (342), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H I+GR +VVH DL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKAVDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|3F7K|A Chain A, X-Ray Crystal Structure Of An Alvinella Pompejana Cu,Zn
Superoxide Dismutase- Hydrogen Peroxide Complex
pdb|3F7L|A Chain A, X-Ray Crystal Structure Of Alvinella Pompejana Cu,Zn
Superoxide Dismutase
Length = 152
Score = 136 bits (342), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 87/122 (71%), Gaps = 1/122 (0%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G + V G++H + + VT V G+ITGL PG HGFH+H GD TNGC S G HFNP
Sbjct: 7 VLKGDSPVTGTIHLKEEGDMVT-VTGEITGLTPGKHGFHVHEFGDNTNGCTSAGGHFNPH 65
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLG 134
K+HGAP D RH GDLGN+VAG DG A +++ D+++ L+G S++GR +VVH D DDLG
Sbjct: 66 GKEHGAPEDENRHAGDLGNVVAGEDGKAVINMKDKLVKLTGPDSVIGRTLVVHVDEDDLG 125
Query: 135 KG 136
+G
Sbjct: 126 RG 127
>pdb|1SDA|O Chain O, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|Y Chain Y, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|B Chain B, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|G Chain G, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
Length = 152
Score = 136 bits (342), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 82/122 (67%), Gaps = 1/122 (0%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 8 VLKGDGPVQGTIHFEAKGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 66
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLG 134
K HG P D ERH GDLGN+ A +GVA V I D +I LSG+ SI+GR +VVH PDDLG
Sbjct: 67 SKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEXSIIGRTMVVHEKPDDLG 126
Query: 135 KG 136
+G
Sbjct: 127 RG 128
>pdb|3GQF|A Chain A, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|B Chain B, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|C Chain C, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|D Chain D, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|E Chain E, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|F Chain F, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3K91|A Chain A, Polysulfane Bridge In Cu-Zn Superoxide Dismutase
pdb|3K91|B Chain B, Polysulfane Bridge In Cu-Zn Superoxide Dismutase
Length = 153
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGF + GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVQEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|2NNX|A Chain A, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|B Chain B, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|C Chain C, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|D Chain D, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
Length = 154
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGF + GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVQEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H I+GR +VVH DDL
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDL 127
Query: 134 GKG 136
GKG
Sbjct: 128 GKG 130
>pdb|4BCY|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Mutation H43f
Length = 153
Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GL GFH+H D T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLFGFHVHEEEDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H+I+GR +VVH DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|2XJL|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase Without Cu
Ligands
Length = 153
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 79/123 (64%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGF + D T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFSVSEEEDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG H+I+GR +VV DDL
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVSEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|3KBE|A Chain A, Metal-Free C. Elegans Cu,Zn Superoxide Dismutase
pdb|3KBF|A Chain A, C. Elegans Cu,Zn Superoxide Dismutase
Length = 157
Score = 127 bits (319), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Query: 21 SVKGSLHFVQ-GPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHG 79
+V G++ Q N ++G+I GL PGLHGFH+H GD+TNGC S GPHFNP K HG
Sbjct: 12 TVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHG 71
Query: 80 APSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 136
P RH GDLGN+ AG DGVA++ + D ++ L G ++++GR++VVHA DDLG+G
Sbjct: 72 GPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEG 128
>pdb|3HFF|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase Without Zn
Ligands
Length = 153
Score = 126 bits (317), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 78/123 (63%), Gaps = 1/123 (0%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H D T GC S GP FNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPSFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
L + G P D ER G LGN+ A DGVA+VSI D +I LSG H+I+GR +VVH DDL
Sbjct: 67 LSRKSGGPKDEERSVGSLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDL 126
Query: 134 GKG 136
GKG
Sbjct: 127 GKG 129
>pdb|3L9Y|A Chain A, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
The Silkworm Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9Y|B Chain B, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
The Silkworm Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
Length = 154
Score = 122 bits (305), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
Query: 38 VKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAG 97
V G++ GL G HGFH+H GD TNGC S G HFNP K+DHG PS RH GDLGNI A
Sbjct: 30 VSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAI 89
Query: 98 PD-GVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 136
D GV +VSI D I L G +SI+GR +VVHADPDDLG G
Sbjct: 90 EDAGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLG 129
>pdb|3L9E|A Chain A, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|B Chain B, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|C Chain C, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|D Chain D, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
Length = 154
Score = 122 bits (305), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
Query: 38 VKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAG 97
V G++ GL G HGFH+H GD TNGC S G HFNP K+DHG PS RH GDLGNI A
Sbjct: 30 VSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAI 89
Query: 98 PD-GVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 136
D GV +VSI D I L G +SI+GR +VVHADPDDLG G
Sbjct: 90 EDSGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLG 129
>pdb|2E46|A Chain A, Crystal Structure Analysis Of The Clock Protein Ea4
Length = 157
Score = 120 bits (302), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 77/115 (66%)
Query: 21 SVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGA 80
+++G++ F Q +G HV+G ITGL PG +GFH+H GD + GC STG HFNP KDHG
Sbjct: 19 TIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSHFNPEHKDHGH 78
Query: 81 PSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGK 135
P+D RH GDLGN+V + + + + D I LSG H I+GRAVV+H DD GK
Sbjct: 79 PNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGK 133
>pdb|2E47|A Chain A, Crystal Structure Analysis Of The Clock Protein Ea4
(Glycosylation Form)
pdb|2E47|B Chain B, Crystal Structure Analysis Of The Clock Protein Ea4
(Glycosylation Form)
Length = 156
Score = 120 bits (301), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 77/115 (66%)
Query: 21 SVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGA 80
+++G++ F Q +G HV+G ITGL PG +GFH+H GD + GC STG HFNP KDHG
Sbjct: 18 TIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSHFNPEHKDHGH 77
Query: 81 PSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGK 135
P+D RH GDLGN+V + + + + D I LSG H I+GRAVV+H DD GK
Sbjct: 78 PNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGK 132
>pdb|1F1G|A Chain A, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|B Chain B, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|C Chain C, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|D Chain D, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|E Chain E, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|F Chain F, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
Length = 154
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 76/124 (61%), Gaps = 2/124 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGV-THVKGKITGLKPGLH-GFHIHALGDTTNGCNSTGPHFN 72
++ G V G + F Q T V +I G P GFHIH GD TNGC S GPHFN
Sbjct: 7 VLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSAGPHFN 66
Query: 73 PLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDD 132
P KK HGAP+D RH GD+GN+ +GVA+ S D +I L G S++GR+VV+HA DD
Sbjct: 67 PFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDD 126
Query: 133 LGKG 136
LGKG
Sbjct: 127 LGKG 130
>pdb|1SDY|A Chain A, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|B Chain B, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|C Chain C, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|D Chain D, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1B4L|A Chain A, 15 Atmosphere Oxygen Yeast CuZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
pdb|1YAZ|A Chain A, Azide-Bound Yeast Cu(Ii)ZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
pdb|1JCV|A Chain A, Reduced Bridge-Broken Yeast CuZN SUPEROXIDE DISMUTASE LOW
TEMPERATURE (-180c) Structure
pdb|1YSO|A Chain A, Yeast Cu, Zn Superoxide Dismutase With The Reduced Bridge
Broken
pdb|2JCW|A Chain A, Reduced Bridge-Broken Yeast CuZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
Length = 153
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 76/124 (61%), Gaps = 2/124 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGV-THVKGKITGLKPGLH-GFHIHALGDTTNGCNSTGPHFN 72
++ G V G + F Q T V +I G P GFHIH GD TNGC S GPHFN
Sbjct: 6 VLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSAGPHFN 65
Query: 73 PLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDD 132
P KK HGAP+D RH GD+GN+ +GVA+ S D +I L G S++GR+VV+HA DD
Sbjct: 66 PFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDD 125
Query: 133 LGKG 136
LGKG
Sbjct: 126 LGKG 129
>pdb|1F1A|A Chain A, Crystal Structure Of Yeast H48q Cuznsod Fals Mutant Analog
Length = 154
Score = 113 bits (283), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGV-THVKGKITGLKPGLH-GFHIHALGDTTNGCNSTGPHFN 72
++ G V G + F Q T V +I G P GFHI GD TNGC S GPHFN
Sbjct: 7 VLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIQEFGDATNGCVSAGPHFN 66
Query: 73 PLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDD 132
P KK HGAP+D RH GD+GN+ +GVA+ S D +I L G S++GR+VV+HA DD
Sbjct: 67 PFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDD 126
Query: 133 LGKG 136
LGKG
Sbjct: 127 LGKG 130
>pdb|1F18|A Chain A, Crystal Structure Of Yeast Copper-Zinc Superoxide
Dismutase Mutant Gly85arg
Length = 154
Score = 112 bits (281), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGV-THVKGKITGLKPGLH-GFHIHALGDTTNGCNSTGPHFN 72
++ G V G + F Q T V +I G P GFHIH GD TNGC S GPHFN
Sbjct: 7 VLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSAGPHFN 66
Query: 73 PLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDD 132
P KK HGAP+D RH GD+ N+ +GVA+ S D +I L G S++GR+VV+HA DD
Sbjct: 67 PFKKTHGAPTDEVRHVGDMRNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDD 126
Query: 133 LGKG 136
LGKG
Sbjct: 127 LGKG 130
>pdb|1JK9|A Chain A, Heterodimer Between H48f-Ysod1 And Yccs
pdb|1JK9|C Chain C, Heterodimer Between H48f-Ysod1 And Yccs
Length = 153
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGV-THVKGKITGLKPGLH-GFHIHALGDTTNGCNSTGPHFN 72
++ G V G + F Q T V +I G P GFHI GD TNGC S GPHFN
Sbjct: 6 VLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIFEFGDATNGCVSAGPHFN 65
Query: 73 PLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDD 132
P KK HGAP+D RH GD+GN+ +GVA+ S D +I L G S++GR+VV+HA DD
Sbjct: 66 PFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDD 125
Query: 133 LGKG 136
LGKG
Sbjct: 126 LGKG 129
>pdb|1F1D|A Chain A, Crystal Structure Of Yeast H46c Cuznsod Mutant
Length = 154
Score = 112 bits (279), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGV-THVKGKITGLKPGLH-GFHIHALGDTTNGCNSTGPHFN 72
++ G V G + F Q T V +I G P GF IH GD TNGC S GPHFN
Sbjct: 7 VLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFCIHEFGDATNGCVSAGPHFN 66
Query: 73 PLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDD 132
P KK HGAP+D RH GD+GN+ +GVA+ S D +I L G S++GR+VV+HA DD
Sbjct: 67 PFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDD 126
Query: 133 LGKG 136
LGKG
Sbjct: 127 LGKG 130
>pdb|1B4T|A Chain A, H48c Yeast Cu(Ii)ZN SUPEROXIDE DISMUTASE ROOM TEMPERATURE
(298k) Structure
Length = 153
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGV-THVKGKITGLKPGLH-GFHIHALGDTTNGCNSTGPHFN 72
++ G V G + F Q T V +I G P GFHI GD TNGC S GPHFN
Sbjct: 6 VLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHICEFGDATNGCVSAGPHFN 65
Query: 73 PLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDD 132
P KK HGAP+D RH GD+GN+ +GVA+ S D +I L G S++GR+VV+HA DD
Sbjct: 66 PFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDD 125
Query: 133 LGKG 136
LGKG
Sbjct: 126 LGKG 129
>pdb|3CE1|A Chain A, Crystal Structure Of The CuZN SUPEROXIDE DISMUTASE FROM
Cryptococcus Liquefaciens Strain N6
Length = 168
Score = 106 bits (264), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 76/124 (61%), Gaps = 4/124 (3%)
Query: 15 LISGATSVKGSLHFVQGPNG--VTHVKGKITGLKPGLH-GFHIHALGDTTNGCNSTGPHF 71
++ G + V+G + F Q +G VT V G+I + GFH+H GD +NGC S GPHF
Sbjct: 10 VLKGDSPVQGVITFTQESSGGPVT-VSGEIKNMDANAQRGFHVHQFGDNSNGCTSAGPHF 68
Query: 72 NPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPD 131
NP +HG + RH GDLGN+ GVA+V I+D + L G HSI+GR +V+HA D
Sbjct: 69 NPTGTNHGDRTAEVRHVGDLGNVKTDASGVAKVQISDSQLSLVGPHSIIGRTIVIHAGED 128
Query: 132 DLGK 135
DLGK
Sbjct: 129 DLGK 132
>pdb|1DO5|A Chain A, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|B Chain B, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|C Chain C, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|D Chain D, Human Copper Chaperone For Superoxide Dismutase Domain Ii
Length = 154
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G +V+G + F+Q ++G I GL+PGLHG H+H GD TN CNS G HFNP
Sbjct: 9 ILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPD 68
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLG 134
HG P D++RH GDLGN+ A DG A + D + + ++GR++++ DDLG
Sbjct: 69 GASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKV---WDVIGRSLIIDEGEDDLG 125
Query: 135 KG 136
+G
Sbjct: 126 RG 127
>pdb|2JLP|A Chain A, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|B Chain B, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|C Chain C, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|D Chain D, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase
Length = 222
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 50 HGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADR 109
H+H GD + GC STGPH+NPL H +H GD GN A DG A
Sbjct: 93 RAIHVHQFGDLSQGCESTGPHYNPLAVPH------PQHPGDFGNF-AVRDGSLWRYRAGL 145
Query: 110 MIPLSGQHSILGRAVVVHADPDDLGKG 136
L+G HSI+GRAVVVHA DDLG+G
Sbjct: 146 AASLAGPHSIVGRAVVVHAGEDDLGRG 172
>pdb|4BCZ|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form.
pdb|4BCZ|B Chain B, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form
Length = 110
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 63/129 (48%), Gaps = 34/129 (26%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H G
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHGAG--------------- 51
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
GDLGN+ A DGVA+VSI D +I LSG HSI+GR +VVH +
Sbjct: 52 ---------------GDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH---EKA 93
Query: 134 GKGKFSSLS 142
G G S L+
Sbjct: 94 GAGAGSRLA 102
>pdb|4BD4|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|B Chain B, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|C Chain C, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|D Chain D, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|E Chain E, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|F Chain F, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|G Chain G, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|H Chain H, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|I Chain I, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
Length = 110
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 62/129 (48%), Gaps = 34/129 (26%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GL GFH+H G
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLFGFHVHGAG--------------- 51
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
GDLGN+ A DGVA+VSI D +I LSG HSI+GR +VVH +
Sbjct: 52 ---------------GDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH---EKA 93
Query: 134 GKGKFSSLS 142
G G S L+
Sbjct: 94 GAGAGSRLA 102
>pdb|1XTM|B Chain B, Crystal Structure Of The Double Mutant Y88h-p104h Of A
Sod-like Protein From Bacillus Subtilis.
pdb|1XTM|A Chain A, Crystal Structure Of The Double Mutant Y88h-p104h Of A
Sod-like Protein From Bacillus Subtilis
Length = 175
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 45 LKPGLH-GFHIHALGDTTN-GCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVA 102
L+PG GFHIH G S G HFNPL K+HG + H GDL N+ G DG
Sbjct: 56 LRPGASLGFHIHEKGSCVRPDFESAGGHFNPLNKEHGFNNPMGHHAGDLPNLEVGADGKV 115
Query: 103 EV--SIADRMIPLSGQHSIL---GRAVVVHADPDD 132
+V + D + + +IL G A ++H DD
Sbjct: 116 DVIMNAPDTSLKKGSKLNILDEDGSAFIIHEQADD 150
>pdb|1XTL|B Chain B, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis.
pdb|1XTL|A Chain A, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis.
pdb|1XTL|C Chain C, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis.
pdb|1XTL|D Chain D, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis
Length = 175
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 45 LKPGLH-GFHIHALGDTTN-GCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVA 102
L+PG GFHI+ G S G HFNPL K+HG + H GDL N+ G DG
Sbjct: 56 LRPGASLGFHIYEKGSCVRPDFESAGGHFNPLNKEHGFNNPMGHHAGDLPNLEVGADGKV 115
Query: 103 EV--SIADRMIPLSGQHSIL---GRAVVVHADPDD 132
+V + D + + +IL G A ++H DD
Sbjct: 116 DVIMNAPDTSLKKGSKLNILDEDGSAFIIHEQADD 150
>pdb|1U3N|A Chain A, A Sod-Like Protein From B. Subtilis, Unstructured In
Solution, Becomes Ordered In The Crystal: Implications
For Function And For Fibrillogenesis
Length = 162
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 45 LKPGLH-GFHIHALGDTTN-GCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVA 102
L+PG GFHI+ G S G FNPL K+HG + H GDL N+ G DG
Sbjct: 43 LRPGASLGFHIYEKGSCVRPDFESAGGPFNPLNKEHGFNNPMGHHAGDLPNLEVGADGKV 102
Query: 103 EV--SIADRMIPLSGQHSIL---GRAVVVHADPDD 132
+V + D + + +IL G A ++H DD
Sbjct: 103 DVIMNAPDTSLKKGSKLNILDEDGSAFIIHEQADD 137
>pdb|2WWN|A Chain A, Yersinia Pseudotuberculosis Superoxide Dismutase C With
Bound Azide
pdb|2WWN|B Chain B, Yersinia Pseudotuberculosis Superoxide Dismutase C With
Bound Azide
pdb|2WWO|A Chain A, Yersinia Pseudotuberculosis Superoxide Dismutase C
pdb|2WWO|B Chain B, Yersinia Pseudotuberculosis Superoxide Dismutase C
Length = 169
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 42 ITGLKPGLHGFHIHALGDTTNGCN--------STGPHFNPLKKD-HGAPSDNERHTGDLG 92
+TGL PG+HGFH+H G + G H +P K H P +++ H GDL
Sbjct: 51 LTGLAPGIHGFHLHEKPSCAPGMKDGKAVPALAAGGHLDPNKTGVHLGPYNDKGHLGDLP 110
Query: 93 NIVAGPDGVAEVSI-ADRMIPLSGQHSILGRAVVVHADPDD 132
+V DG A + A R+ LS + A+++HA D+
Sbjct: 111 GLVVNADGTATYPVLAPRLKSLS---EVKQHALMIHAGGDN 148
>pdb|1IBD|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant V29a
Length = 151
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Query: 24 GSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCN--------STGPHFNPLK 75
G++ Q GV + ++ L PG+HGFHIH G + + G H++P
Sbjct: 17 GTIELSQNKYGVAFIP-ELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEH 75
Query: 76 KD-HGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDD 132
+ HG P ++ H GDL + +G+A + + P + G A+++HA D+
Sbjct: 76 TNKHGFPWTDDNHKGDLPALFVSANGLATNPV---LAPRLTLKELKGHAIMIHAGGDN 130
>pdb|1IB5|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant W83y
Length = 151
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Query: 24 GSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCN--------STGPHFNPLK 75
G++ Q GV + ++ L PG+HGFHIH G + + G H++P
Sbjct: 17 GTIELSQNKYGVVFIP-ELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEH 75
Query: 76 KD-HGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDD 132
+ HG P ++ H GDL + +G+A + + P + G A+++HA D+
Sbjct: 76 TNKHGFPYTDDNHKGDLPALFVSANGLATNPV---LAPRLTLKELKGHAIMIHAGGDN 130
>pdb|1BZO|A Chain A, Three-Dimensional Structure Of Prokaryotic Cu,Zn
Superoxide Dismutase From P.Leiognathi, Solved By X-Ray
Crystallography
Length = 151
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Query: 24 GSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCN--------STGPHFNPLK 75
G++ Q GV + ++ L PG+HGFHIH G + + G H++P
Sbjct: 17 GTIELSQNKYGVVFIP-ELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEH 75
Query: 76 KD-HGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDD 132
+ HG P ++ H GDL + +G+A + + L + G A+++HA D+
Sbjct: 76 TNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLTLK---ELKGHAIMIHAGGDN 130
>pdb|1IBH|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant M41i
Length = 151
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Query: 24 GSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCN--------STGPHFNPLK 75
G++ Q GV + ++ L PG+HGFHIH G + + G H++P
Sbjct: 17 GTIELSQNKYGVVFIP-ELADLTPGIHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEH 75
Query: 76 KD-HGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDD 132
+ HG P ++ H GDL + +G+A + + P + G A+++HA D+
Sbjct: 76 TNKHGFPWTDDNHKGDLPALFVSANGLATNPV---LAPRLTLKELKGHAIMIHAGGDN 130
>pdb|1IBB|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant W83f
Length = 151
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Query: 24 GSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCN--------STGPHFNPLK 75
G++ Q GV + ++ L PG+HGFHIH G + + G H++P
Sbjct: 17 GTIELSQNKYGVVFIP-ELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEH 75
Query: 76 KD-HGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDD 132
+ HG P ++ H GDL + +G+A + + P + G A+++HA D+
Sbjct: 76 TNKHGFPFTDDNHKGDLPALFVSANGLATNPV---LAPRLTLKELKGHAIMIHAGGDN 130
>pdb|1OAJ|A Chain A, Active Site Copper And Zinc Ions Modulate The Quaternary
Structure Of Prokaryotic Cu,Zn Superoxide Dismutase
Length = 151
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Query: 24 GSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCN--------STGPHFNPLK 75
G++ Q GV + ++ L PG+HGFHIH G + + G H++P
Sbjct: 17 GTIELSQNDYGVVFIP-ELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEH 75
Query: 76 KD-HGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDD 132
+ HG P ++ H GDL + +G+A + + P + G A+++HA D+
Sbjct: 76 TNKHGFPWTDDNHKGDLPALFVSANGLATNPV---LAPRLTLKELKGHAIMIHAGGDN 130
>pdb|1S4I|B Chain B, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
pdb|1S4I|A Chain A, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
pdb|1S4I|C Chain C, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
pdb|1S4I|D Chain D, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
Length = 175
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 45 LKPGLH-GFHIHALGDTTN-GCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVA 102
L+PG GFHI+ G S G FNPL K+HG + H GDL N+ G DG
Sbjct: 56 LRPGASLGFHIYEKGSCVRPDFESAGGPFNPLNKEHGFNNPMGHHAGDLPNLEVGADGKV 115
Query: 103 EV--SIADRMIPLSGQHSIL---GRAVVVHADPDD 132
+V + D + + +IL G A ++H DD
Sbjct: 116 DVIMNAPDTSLKKGSKLNILDEDGSAFIIHEQADD 150
>pdb|1IBF|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant V29g
Length = 151
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Query: 24 GSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCN--------STGPHFNPLK 75
G++ Q GV + ++ L PG+HGFHIH G + + G H++P
Sbjct: 17 GTIELSQNKYGVGFIP-ELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEH 75
Query: 76 KD-HGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDD 132
+ HG P ++ H GDL + +G+A + + L + G A+++HA D+
Sbjct: 76 TNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLTLK---ELKGHAIMIHAGGDN 130
>pdb|1YAI|A Chain A, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
pdb|1YAI|B Chain B, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
pdb|1YAI|C Chain C, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
Length = 151
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 24 GSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCN--------STGPHFNPLK 75
G++ Q GV ++ L PG+HGFHIH G + + G H++P
Sbjct: 17 GTIELSQNKYGVVFTP-ELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEH 75
Query: 76 KD-HGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDD 132
+ HG P ++ H GDL + +G+A + + L + G A+++HA D+
Sbjct: 76 TNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLTLK---ELKGHAIMIHAGGDN 130
>pdb|1OAL|A Chain A, Active Site Copper And Zinc Ions Modulate The Quaternary
Structure Of Prokaryotic Cu,Zn Superoxide Dismutase
Length = 151
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 24 GSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCN--------STGPHFNPLK 75
G++ Q GV + ++ L PG HGFHIH G + + G H++P
Sbjct: 17 GTIELSQNKYGVVFIP-ELADLTPGEHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEH 75
Query: 76 KD-HGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDD 132
+ HG P ++ H GDL + +G+A + + L + G A+++HA D+
Sbjct: 76 TNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLTLK---ELKGHAIMIHAGGDN 130
>pdb|2AQM|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM BRUCELLA ABORTUS
Length = 154
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 13/127 (10%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCN--------S 66
L +G G++ + P G+ H K + L PG HGFH+H G +
Sbjct: 11 LPTGPGKEVGTVVISEAPGGL-HFKVNMEKLTPGYHGFHVHENPSCAPGEKDGKIVPALA 69
Query: 67 TGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDG-VAEVSIADRMIPLSGQHSILGRAVV 125
G H++P H + + H GDL + A DG V+E +A + L+ I R+++
Sbjct: 70 AGGHYDPGNTHHHLGPEGDGHMGDLPRLSANADGKVSETVVAPHLKKLA---EIKQRSLM 126
Query: 126 VHADPDD 132
VH D+
Sbjct: 127 VHVGGDN 133
>pdb|1EQW|A Chain A, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
pdb|1EQW|B Chain B, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
pdb|1EQW|C Chain C, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
pdb|1EQW|D Chain D, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
Length = 156
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 14/128 (10%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNS-------- 66
L SG G + + P G+ + GL PG+HGFH+H G
Sbjct: 11 LSSGTGENIGEITVSETPYGLLFTP-HLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALM 69
Query: 67 TGPHFNPLKK-DHGAPSDNERHTGDLGNIVAGPDGVAEVS-IADRMIPLSGQHSILGRAV 124
G H +P K H P +++ H GDL +V DG A +A R+ LS + G ++
Sbjct: 70 AGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLS---ELKGHSL 126
Query: 125 VVHADPDD 132
++H D+
Sbjct: 127 MIHKGGDN 134
>pdb|1ESO|A Chain A, Monomeric Cu,Zn Superoxide Dismutase From Escherichia Coli
Length = 154
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 12/101 (11%)
Query: 42 ITGLKPGLHGFHIHALGDT--------TNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGN 93
+ L PG HGFHIHA G + S G H +P + H GDL
Sbjct: 37 LKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAGHLGDLPA 96
Query: 94 IVAGPDGVA-EVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
+V DG A + IA R+ L I +A++VH D++
Sbjct: 97 LVVNNDGKATDAVIAPRLKSLD---EIKDKALMVHVGGDNM 134
>pdb|2AQS|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91E, K94e Double Mutant
pdb|2AQS|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91E, K94e Double Mutant
Length = 164
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 42 ITGLKPGLHGFHIH---------ALGDTTNGCNSTGPHFNPL-KKDHGAPSDNERHTGDL 91
+ GL GLHGFHIH G+ T G + G H++P K HG P ++ H GDL
Sbjct: 46 LQGLSEGLHGFHIHENPSCEPKEEEGELTAGLGAGG-HWDPKGAKQHGYPWQDDAHLGDL 104
Query: 92 GNIVAGPDGVAEVSI-ADRMIPLSGQHSILGRAVVVHADPDD 132
+ DG A + A R+ L + G ++++H D+
Sbjct: 105 PALTVLHDGTATNPVLAPRLKHLD---DVRGHSIMIHTGGDN 143
>pdb|2AQT|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91Q, K94q Double Mutant
pdb|2AQT|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91Q, K94q Double Mutant
pdb|2AQT|C Chain C, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91Q, K94q Double Mutant
Length = 164
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 42 ITGLKPGLHGFHIHA---------LGDTTNGCNSTGPHFNPL-KKDHGAPSDNERHTGDL 91
+ GL GLHGFHIH G T G + G H++P K HG P ++ H GDL
Sbjct: 46 LQGLSEGLHGFHIHENPSCEPKEQEGQLTAGLGAGG-HWDPKGAKQHGYPWQDDAHLGDL 104
Query: 92 GNIVAGPDGVAEVSI-ADRMIPLSGQHSILGRAVVVHADPDD 132
+ DG A + A R+ L + G ++++H D+
Sbjct: 105 PALTVLHDGTATNPVLAPRLKHLD---DVRGHSIMIHTGGDN 143
>pdb|2AQN|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
pdb|2AQN|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
pdb|2AQN|C Chain C, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
Length = 164
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 42 ITGLKPGLHGFHIHA---------LGDTTNGCNSTGPHFNPL-KKDHGAPSDNERHTGDL 91
+ GL GLHGFHIH G T G + G H++P K HG P ++ H GDL
Sbjct: 46 LQGLSEGLHGFHIHENPSCEPKEKEGKLTAGLGAGG-HWDPKGAKQHGYPWQDDAHLGDL 104
Query: 92 GNIVAGPDGVAEVSI-ADRMIPLSGQHSILGRAVVVHADPDD 132
+ DG A + A R+ L + G ++++H D+
Sbjct: 105 PALTVLHDGTATNPVLAPRLKHLD---DVRGHSIMIHTGGDN 143
>pdb|2AQR|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS K91Q
Mutant
pdb|2AQR|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS K91Q
Mutant
pdb|2AQR|C Chain C, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS K91Q
Mutant
Length = 164
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 42 ITGLKPGLHGFHIHA---------LGDTTNGCNSTGPHFNPL-KKDHGAPSDNERHTGDL 91
+ GL GLHGFHIH G T G + G H++P K HG P ++ H GDL
Sbjct: 46 LQGLSEGLHGFHIHENPSCEPKEQEGKLTAGLGAGG-HWDPKGAKQHGYPWQDDAHLGDL 104
Query: 92 GNIVAGPDGVAEVSI-ADRMIPLSGQHSILGRAVVVHADPDD 132
+ DG A + A R+ L + G ++++H D+
Sbjct: 105 PALTVLHDGTATNPVLAPRLKHLD---DVRGHSIMIHTGGDN 143
>pdb|2AQP|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS E73A
MUTANT
pdb|2AQP|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS E73A
MUTANT
Length = 164
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 42 ITGLKPGLHGFHIHA---------LGDTTNGCNSTGPHFNPL-KKDHGAPSDNERHTGDL 91
+ GL GLHGFHIH G T G + G H++P K HG P ++ H GDL
Sbjct: 46 LQGLSAGLHGFHIHENPSCEPKEKEGKLTAGLGAGG-HWDPKGAKQHGYPWQDDAHLGDL 104
Query: 92 GNIVAGPDGVAEVSI-ADRMIPLSGQHSILGRAVVVHADPDD 132
+ DG A + A R+ L + G ++++H D+
Sbjct: 105 PALTVLHDGTATNPVLAPRLKHLD---DVRGHSIMIHTGGDN 143
>pdb|2AQQ|A Chain A, CuZN SUPEROXID DISMUTATE FROM NEISSERIA MENINGITIDIS K91E
MUTANT
pdb|2AQQ|B Chain B, CuZN SUPEROXID DISMUTATE FROM NEISSERIA MENINGITIDIS K91E
MUTANT
pdb|2AQQ|C Chain C, CuZN SUPEROXID DISMUTATE FROM NEISSERIA MENINGITIDIS K91E
MUTANT
Length = 164
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 42 ITGLKPGLHGFHIH---------ALGDTTNGCNSTGPHFNPL-KKDHGAPSDNERHTGDL 91
+ GL GLHGFHIH G T G + G H++P K HG P ++ H GDL
Sbjct: 46 LQGLSEGLHGFHIHENPSCEPKEEEGKLTAGLGAGG-HWDPKGAKQHGYPWQDDAHLGDL 104
Query: 92 GNIVAGPDGVAEVSI-ADRMIPLSGQHSILGRAVVVHADPDD 132
+ DG A + A R+ L + G ++++H D+
Sbjct: 105 PALTVLHDGTATNPVLAPRLKHLD---DVRGHSIMIHTGGDN 143
>pdb|2K4W|A Chain A, The Solution Structure Of The Monomeric Copper, Zinc
Superox Dismutase From Salmonella Enterica
Length = 154
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 12/101 (11%)
Query: 42 ITGLKPGLHGFHIHALGDTTN--------GCNSTGPHFNPLKKDHGAPSDNERHTGDLGN 93
+ L PG HGFHIHA G + G H +P + + H GDL
Sbjct: 37 LKALPPGEHGFHIHANGSCQPAIKDGQAVAAEAAGGHLDPQNTGKHEGPEGQGHLGDLPV 96
Query: 94 IVAGPDGVA-EVSIADRMIPLSGQHSILGRAVVVHADPDDL 133
+V DG+A E A R+ L + +A+++H D++
Sbjct: 97 LVVNNDGIATEPVTAPRLKSLD---EVKDKALMIHVGGDNM 134
>pdb|1Z9P|A Chain A, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi
pdb|1Z9P|B Chain B, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi
Length = 155
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Query: 41 KITGLKPGLHGFHIHAL---------GDTTNGCNSTGPHFNPLK-KDHGAPSDNERHTGD 90
K+ L GLHGFHIH G G + G H++P + + HG P ++ H GD
Sbjct: 36 KLHDLAHGLHGFHIHEKPSCEPKEKDGKLVAGLGAGG-HWDPKQTQKHGYPWSDDAHMGD 94
Query: 91 LGNIVAGPDGVAEVSI-ADRMIPLSGQHSILGRAVVVHADPDD 132
L + DG A + A R+ L+ + G ++++HA D+
Sbjct: 95 LPALFVMHDGSATTPVLAPRLKKLA---EVKGHSLMIHAGGDN 134
>pdb|1Z9N|A Chain A, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi With Haem Bound At The Dimer
Interface
pdb|1Z9N|B Chain B, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi With Haem Bound At The Dimer
Interface
pdb|1Z9N|C Chain C, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi With Haem Bound At The Dimer
Interface
pdb|1Z9N|D Chain D, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi With Haem Bound At The Dimer
Interface
Length = 177
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Query: 41 KITGLKPGLHGFHIHAL---------GDTTNGCNSTGPHFNPLK-KDHGAPSDNERHTGD 90
K+ L GLHGFHIH G G + G H++P + + HG P ++ H GD
Sbjct: 58 KLHDLAHGLHGFHIHEKPSCEPKEKDGKLVAGLGAGG-HWDPKQTQKHGYPWSDDAHMGD 116
Query: 91 LGNIVAGPDGVAEVSI-ADRMIPLSGQHSILGRAVVVHADPDD 132
L + DG A + A R+ L+ + G ++++HA D+
Sbjct: 117 LPALFVMHDGSATTPVLAPRLKKLA---EVKGHSLMIHAGGDN 156
>pdb|2APS|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM ACTINOBACILLUS
Pleuropneumoniae
pdb|2APS|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM ACTINOBACILLUS
Pleuropneumoniae
Length = 162
Score = 34.3 bits (77), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 15/102 (14%)
Query: 42 ITGLKPGLHGFHIHA---------LGDTTNGCNSTGPHFNPLK-KDHGAPSDNERHTGDL 91
+ GL GLHGFHIH G G + G H++P + K HG P + H GDL
Sbjct: 44 LHGLAQGLHGFHIHQNPSCEPKEKDGKLVAGLGAGG-HWDPKETKQHGYPWSDNAHLGDL 102
Query: 92 GNIVAGPDGVAEVSI-ADRMIPLSGQHSILGRAVVVHADPDD 132
+ DG A + A R+ L + G ++++H D+
Sbjct: 103 PALFVEHDGSATNPVLAPRLKKLD---EVKGHSLMIHEGGDN 141
>pdb|3G87|A Chain A, Crystal Structure Of Malonyl Coa-Acyl Carrier Protein
Transacylase From Burkholderia Pseudomallei Using Dried
Seaweed As Nucleant Or Protease
Length = 394
Score = 30.0 bits (66), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 105 SIADRMIPLSGQ-HSILG---RAVVVHADPDDLGKGKFSSLSLILITNLFYY 152
++ DR L+ Q ++LG RA+ V D+LG+ +F+ +L ++ L YY
Sbjct: 24 ALFDRFADLTAQADAVLGYSIRALCVDDPRDELGRTQFTQPALYVVNALTYY 75
>pdb|3VMA|A Chain A, Crystal Structure Of The Full-Length Transglycosylase
Pbp1b From Escherichia Coli
Length = 768
Score = 29.6 bits (65), Expect = 1.1, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 120 LGRAVVVHADPDDLGKGKFSSLSLILITNLFYYKDTAYWYKCTQKYV 166
+GRAV+ + +G S+L+ L+ NLF + +YW K + Y+
Sbjct: 212 IGRAVLANLTAGRTVQGA-STLTQQLVKNLFLSSERSYWRKANEAYM 257
>pdb|3FWL|A Chain A, Crystal Structure Of The Full-Length Transglycosylase
Pbp1b From Escherichia Coli
Length = 751
Score = 29.3 bits (64), Expect = 1.3, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 120 LGRAVVVHADPDDLGKGKFSSLSLILITNLFYYKDTAYWYKCTQKY 165
+GRAV+ + +G S+L+ L+ NLF + +YW K + Y
Sbjct: 195 IGRAVLANLTAGRTVQGA-STLTQQLVKNLFLSSERSYWRKANEAY 239
>pdb|3GU1|A Chain A, Y97w Mutant In Organophosphorus Hydrolase From Deinococcus
Radiodurans
Length = 337
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 117 HSILGRAV--VVHADPDDLGKGKFSSLSLILITNLFYYKDTAYWYKCTQKYVYFKLSVLL 174
++L R + VV A P+D G+ + T L T +WY+ YFK L
Sbjct: 68 RALLARGIQTVVDATPNDCGRNPAFLREVSEATGLQILCATGFWYEGEGATTYFKFRASL 127
Query: 175 ENNMS 179
+ S
Sbjct: 128 GDAES 132
>pdb|1PZS|A Chain A, Crystal Structure Of A Cu-Zn Superoxide Dismutase From
Mycobacterium Tuberculosis At 1.63 Resolution
Length = 208
Score = 26.6 bits (57), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 26 LHFVQGPNGVTHVKGKITGLKPGLHGFHIHALG 58
F G VT + L PG HG HIH +G
Sbjct: 57 FEFANGYATVTIATTGVGKLTPGFHGLHIHQVG 89
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.138 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,792,882
Number of Sequences: 62578
Number of extensions: 259871
Number of successful extensions: 671
Number of sequences better than 100.0: 138
Number of HSP's better than 100.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 530
Number of HSP's gapped (non-prelim): 138
length of query: 180
length of database: 14,973,337
effective HSP length: 93
effective length of query: 87
effective length of database: 9,153,583
effective search space: 796361721
effective search space used: 796361721
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 48 (23.1 bits)