Query 030264
Match_columns 180
No_of_seqs 150 out of 1548
Neff 11.0
Searched_HMMs 46136
Date Fri Mar 29 11:05:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030264.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030264hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PHA02857 monoglyceride lipase; 99.9 3.5E-24 7.6E-29 153.4 17.6 161 5-177 49-274 (276)
2 KOG1455 Lysophospholipase [Lip 99.9 1.9E-24 4E-29 150.4 14.3 163 4-176 78-312 (313)
3 PLN02298 hydrolase, alpha/beta 99.9 3.3E-23 7.2E-28 151.9 17.6 163 5-178 84-319 (330)
4 PLN02385 hydrolase; alpha/beta 99.9 1.9E-23 4.1E-28 154.3 16.0 164 5-179 112-348 (349)
5 PRK10749 lysophospholipase L2; 99.9 1.4E-22 3.1E-27 148.5 17.3 161 4-176 77-329 (330)
6 PF00326 Peptidase_S9: Prolyl 99.9 2.8E-22 6.1E-27 138.5 16.2 162 5-179 11-212 (213)
7 TIGR03343 biphenyl_bphD 2-hydr 99.9 1.3E-22 2.7E-27 145.7 14.0 153 5-174 57-281 (282)
8 PLN02965 Probable pheophorbida 99.9 3.6E-22 7.8E-27 141.6 16.0 151 6-176 28-253 (255)
9 PLN02824 hydrolase, alpha/beta 99.9 2E-22 4.4E-27 145.6 13.6 155 6-176 53-294 (294)
10 TIGR02240 PHA_depoly_arom poly 99.9 4E-22 8.8E-27 142.8 15.0 152 4-176 47-266 (276)
11 TIGR03611 RutD pyrimidine util 99.9 2.6E-22 5.7E-27 141.6 12.9 154 5-174 36-256 (257)
12 TIGR03056 bchO_mg_che_rel puta 99.9 5.1E-22 1.1E-26 142.0 14.4 155 4-174 50-278 (278)
13 PLN02652 hydrolase; alpha/beta 99.9 1.8E-21 3.9E-26 145.1 17.1 161 5-179 160-390 (395)
14 PF01738 DLH: Dienelactone hyd 99.9 1.4E-21 3.1E-26 135.4 14.2 164 4-177 37-218 (218)
15 PRK10673 acyl-CoA esterase; Pr 99.9 1.9E-21 4.2E-26 137.6 15.1 151 5-175 39-254 (255)
16 PRK00870 haloalkane dehalogena 99.9 2.2E-21 4.7E-26 140.7 14.7 155 6-176 71-301 (302)
17 COG2267 PldB Lysophospholipase 99.9 1E-20 2.2E-25 136.2 17.2 165 4-178 57-296 (298)
18 PRK03204 haloalkane dehalogena 99.9 2E-21 4.3E-26 139.9 13.4 153 5-173 57-285 (286)
19 TIGR02427 protocat_pcaD 3-oxoa 99.9 1.5E-21 3.3E-26 136.9 12.2 153 5-174 36-251 (251)
20 PLN02679 hydrolase, alpha/beta 99.9 3E-21 6.5E-26 143.0 14.2 156 5-176 111-357 (360)
21 PRK03592 haloalkane dehalogena 99.9 3.8E-21 8.3E-26 139.0 13.5 154 7-176 52-289 (295)
22 COG3571 Predicted hydrolase of 99.9 1.4E-20 3E-25 119.5 14.2 168 4-176 39-211 (213)
23 KOG1552 Predicted alpha/beta h 99.9 3.2E-21 6.9E-26 131.8 11.8 151 7-176 87-252 (258)
24 KOG4178 Soluble epoxide hydrol 99.9 9.8E-21 2.1E-25 133.7 14.1 159 3-176 66-320 (322)
25 COG1647 Esterase/lipase [Gener 99.9 9.3E-21 2E-25 126.4 12.7 153 5-174 39-242 (243)
26 PRK05077 frsA fermentation/res 99.9 2.9E-20 6.4E-25 139.5 16.4 155 4-177 218-413 (414)
27 TIGR01738 bioH putative pimelo 99.9 1.6E-20 3.5E-25 131.3 13.6 148 4-173 26-245 (245)
28 KOG1454 Predicted hydrolase/ac 99.9 3.3E-20 7.1E-25 134.9 15.0 155 8-177 86-325 (326)
29 PLN03087 BODYGUARD 1 domain co 99.9 3.8E-20 8.2E-25 140.1 15.9 154 6-175 230-478 (481)
30 PRK13604 luxD acyl transferase 99.9 2.8E-20 6E-25 132.4 14.2 138 5-146 61-247 (307)
31 PRK10349 carboxylesterase BioH 99.9 2.7E-20 5.8E-25 132.0 14.0 148 5-174 36-254 (256)
32 PRK10566 esterase; Provisional 99.9 3E-20 6.5E-25 131.2 13.6 154 5-177 51-249 (249)
33 PF12697 Abhydrolase_6: Alpha/ 99.8 7.5E-21 1.6E-25 131.3 10.1 137 6-146 22-219 (228)
34 PRK06489 hypothetical protein; 99.8 9.4E-20 2E-24 135.1 16.4 156 6-178 103-359 (360)
35 TIGR03695 menH_SHCHC 2-succiny 99.8 6.1E-20 1.3E-24 128.5 14.1 152 6-174 25-251 (251)
36 PLN02578 hydrolase 99.8 9.5E-20 2.1E-24 134.8 15.6 149 5-174 109-353 (354)
37 TIGR01250 pro_imino_pep_2 prol 99.8 8.3E-20 1.8E-24 130.7 14.5 151 7-174 52-288 (288)
38 PRK07581 hypothetical protein; 99.8 1.3E-19 2.8E-24 133.4 15.7 157 6-178 69-338 (339)
39 PRK08775 homoserine O-acetyltr 99.8 6.9E-20 1.5E-24 135.1 13.8 153 6-177 97-340 (343)
40 PF12695 Abhydrolase_5: Alpha/ 99.8 4.3E-20 9.2E-25 120.0 11.3 123 4-143 22-145 (145)
41 PRK11126 2-succinyl-6-hydroxy- 99.8 2E-19 4.4E-24 126.4 15.2 145 7-175 26-241 (242)
42 PLN02894 hydrolase, alpha/beta 99.8 2.9E-19 6.4E-24 133.9 16.6 158 6-179 129-388 (402)
43 KOG3043 Predicted hydrolase re 99.8 4.9E-20 1.1E-24 123.1 11.0 165 5-178 64-242 (242)
44 KOG4409 Predicted hydrolase/ac 99.8 1E-19 2.2E-24 129.2 13.2 156 5-175 113-363 (365)
45 TIGR01836 PHA_synth_III_C poly 99.8 2.9E-19 6.2E-24 132.1 15.3 158 5-175 91-349 (350)
46 TIGR01607 PST-A Plasmodium sub 99.8 2.1E-19 4.6E-24 131.7 14.1 156 5-174 71-331 (332)
47 PF00561 Abhydrolase_1: alpha/ 99.8 8E-20 1.7E-24 127.1 11.3 146 9-170 1-229 (230)
48 TIGR01392 homoserO_Ac_trn homo 99.8 1.9E-19 4E-24 133.2 13.2 156 5-174 69-351 (351)
49 PLN03084 alpha/beta hydrolase 99.8 4.2E-19 9.1E-24 131.8 14.3 153 5-174 150-382 (383)
50 COG1506 DAP2 Dipeptidyl aminop 99.8 3.5E-19 7.5E-24 139.9 13.4 164 4-180 419-620 (620)
51 PRK14875 acetoin dehydrogenase 99.8 3.8E-19 8.2E-24 132.4 13.0 151 5-175 154-370 (371)
52 PLN02511 hydrolase 99.8 1.4E-19 3.1E-24 135.1 10.4 163 5-177 126-366 (388)
53 PRK00175 metX homoserine O-ace 99.8 1.2E-18 2.6E-23 129.9 15.1 162 6-180 89-378 (379)
54 PRK10985 putative hydrolase; P 99.8 6.1E-19 1.3E-23 129.1 12.4 164 5-178 84-322 (324)
55 KOG2984 Predicted hydrolase [G 99.8 1.7E-19 3.6E-24 118.9 8.2 151 9-176 72-276 (277)
56 TIGR03100 hydr1_PEP hydrolase, 99.8 2.6E-18 5.6E-23 123.0 15.1 155 5-174 54-273 (274)
57 COG2945 Predicted hydrolase of 99.8 9.2E-19 2E-23 114.5 10.9 147 5-174 57-205 (210)
58 TIGR01249 pro_imino_pep_1 prol 99.8 8.4E-18 1.8E-22 122.2 15.8 152 6-176 51-305 (306)
59 COG0412 Dienelactone hydrolase 99.8 2.5E-17 5.5E-22 114.9 16.7 167 4-178 50-235 (236)
60 PLN02211 methyl indole-3-aceta 99.8 2.6E-17 5.5E-22 117.8 16.0 153 6-175 43-269 (273)
61 PF02230 Abhydrolase_2: Phosph 99.8 3.4E-17 7.3E-22 113.4 13.6 125 35-177 88-216 (216)
62 PRK11071 esterase YqiA; Provis 99.7 1.1E-16 2.3E-21 108.6 14.4 132 7-174 31-189 (190)
63 KOG4391 Predicted alpha/beta h 99.7 6.5E-18 1.4E-22 112.6 7.6 155 7-177 105-283 (300)
64 PRK11460 putative hydrolase; P 99.7 1.6E-16 3.5E-21 111.0 15.1 120 36-178 86-210 (232)
65 COG0429 Predicted hydrolase of 99.7 1.6E-17 3.5E-22 117.5 9.8 165 4-178 100-342 (345)
66 COG3208 GrsT Predicted thioest 99.7 1.8E-16 4E-21 108.0 14.1 151 8-174 33-234 (244)
67 PLN02980 2-oxoglutarate decarb 99.7 5.6E-17 1.2E-21 138.4 14.3 156 6-177 1395-1640(1655)
68 TIGR01838 PHA_synth_I poly(R)- 99.7 5.8E-16 1.3E-20 118.7 17.8 171 5-178 217-506 (532)
69 PF08840 BAAT_C: BAAT / Acyl-C 99.7 2.8E-16 6.1E-21 108.2 13.5 144 35-179 4-213 (213)
70 PLN02442 S-formylglutathione h 99.7 1.3E-15 2.9E-20 109.4 17.0 130 34-178 126-282 (283)
71 TIGR02821 fghA_ester_D S-formy 99.7 1.2E-15 2.5E-20 109.4 15.9 114 49-177 136-275 (275)
72 KOG3253 Predicted alpha/beta h 99.7 6.5E-16 1.4E-20 116.4 11.6 169 9-178 209-380 (784)
73 PRK05855 short chain dehydroge 99.7 1.3E-15 2.7E-20 119.6 12.5 62 100-176 231-292 (582)
74 KOG2382 Predicted alpha/beta h 99.7 4.3E-15 9.2E-20 105.4 13.5 156 8-177 80-314 (315)
75 PF06500 DUF1100: Alpha/beta h 99.7 1.6E-15 3.4E-20 111.6 11.6 154 5-177 215-410 (411)
76 PRK06765 homoserine O-acetyltr 99.7 5.6E-15 1.2E-19 110.1 14.7 156 7-175 98-387 (389)
77 PLN00021 chlorophyllase 99.6 2.3E-14 5E-19 104.0 16.4 168 5-179 76-286 (313)
78 PRK05371 x-prolyl-dipeptidyl a 99.6 4.8E-14 1E-18 112.9 16.4 159 5-178 276-521 (767)
79 PLN02872 triacylglycerol lipas 99.6 8.6E-15 1.9E-19 109.2 11.3 68 98-178 319-391 (395)
80 TIGR01839 PHA_synth_II poly(R) 99.6 3E-14 6.5E-19 108.7 13.9 136 5-143 244-481 (560)
81 PRK07868 acyl-CoA synthetase; 99.6 6.6E-14 1.4E-18 115.8 16.5 159 5-177 96-362 (994)
82 KOG1838 Alpha/beta hydrolase [ 99.6 3.4E-14 7.3E-19 104.1 12.7 142 4-146 150-367 (409)
83 PF05448 AXE1: Acetyl xylan es 99.6 6E-14 1.3E-18 101.9 12.4 155 4-176 105-320 (320)
84 KOG4667 Predicted esterase [Li 99.6 2.1E-14 4.6E-19 95.8 8.8 140 5-147 59-243 (269)
85 PRK10162 acetyl esterase; Prov 99.6 3.2E-13 6.9E-18 98.7 15.1 156 7-178 111-317 (318)
86 TIGR01840 esterase_phb esteras 99.5 1.2E-13 2.7E-18 95.3 11.5 124 6-129 41-195 (212)
87 PRK10115 protease 2; Provision 99.5 3.3E-13 7.1E-18 107.3 13.7 143 4-146 470-656 (686)
88 COG0400 Predicted esterase [Ge 99.5 9.9E-13 2.1E-17 89.5 12.8 121 35-177 81-206 (207)
89 PF06821 Ser_hydrolase: Serine 99.5 5.5E-13 1.2E-17 88.6 11.1 109 35-146 40-156 (171)
90 PF07859 Abhydrolase_3: alpha/ 99.5 7.7E-13 1.7E-17 91.2 9.5 131 7-145 28-210 (211)
91 COG4757 Predicted alpha/beta h 99.5 1.2E-12 2.5E-17 88.6 9.8 153 4-173 53-280 (281)
92 COG3243 PhaC Poly(3-hydroxyalk 99.4 6.9E-12 1.5E-16 91.8 11.9 137 5-144 136-371 (445)
93 PF02129 Peptidase_S15: X-Pro 99.4 1E-11 2.3E-16 88.9 12.8 79 4-84 53-134 (272)
94 TIGR03101 hydr2_PEP hydrolase, 99.4 2.2E-12 4.8E-17 91.5 9.1 78 5-85 53-133 (266)
95 COG0596 MhpC Predicted hydrola 99.4 6E-11 1.3E-15 83.1 15.7 147 9-173 51-279 (282)
96 KOG2564 Predicted acetyltransf 99.4 5.2E-12 1.1E-16 87.7 9.0 75 8-83 102-179 (343)
97 TIGR01849 PHB_depoly_PhaZ poly 99.4 1.4E-11 3E-16 91.6 11.8 69 97-176 332-406 (406)
98 COG3458 Acetyl esterase (deace 99.4 1.5E-11 3.3E-16 85.1 10.6 143 1-145 102-302 (321)
99 COG0657 Aes Esterase/lipase [L 99.3 5.2E-11 1.1E-15 87.0 13.8 152 5-175 107-309 (312)
100 PF08538 DUF1749: Protein of u 99.3 1.5E-11 3.2E-16 87.4 10.5 157 6-174 61-303 (303)
101 PF06057 VirJ: Bacterial virul 99.3 2.8E-11 6.2E-16 80.3 9.6 146 4-175 25-191 (192)
102 PF09752 DUF2048: Uncharacteri 99.3 5.4E-11 1.2E-15 85.9 11.5 134 5-143 118-328 (348)
103 KOG2100 Dipeptidyl aminopeptid 99.3 5.3E-11 1.2E-15 95.5 12.4 161 5-178 555-749 (755)
104 PF06342 DUF1057: Alpha/beta h 99.3 3.9E-10 8.4E-15 79.0 14.9 121 5-129 59-239 (297)
105 COG3545 Predicted esterase of 99.3 1.6E-10 3.6E-15 75.2 12.1 109 35-146 44-159 (181)
106 TIGR00976 /NonD putative hydro 99.3 1E-10 2.3E-15 91.5 13.5 78 4-83 49-129 (550)
107 PF12740 Chlorophyllase2: Chlo 99.3 6.9E-10 1.5E-14 77.6 15.9 169 4-179 40-253 (259)
108 PF03583 LIP: Secretory lipase 99.3 1.5E-10 3.3E-15 83.4 12.9 63 102-180 219-285 (290)
109 PF12715 Abhydrolase_7: Abhydr 99.3 3.5E-12 7.6E-17 92.8 3.6 132 3-139 155-343 (390)
110 KOG2551 Phospholipase/carboxyh 99.2 3.6E-10 7.8E-15 76.2 11.7 124 35-177 90-221 (230)
111 PF03959 FSH1: Serine hydrolas 99.2 9.7E-11 2.1E-15 80.9 9.1 111 33-146 86-204 (212)
112 PF03403 PAF-AH_p_II: Platelet 99.2 3.7E-10 8.1E-15 84.1 12.1 121 51-178 228-360 (379)
113 PF00975 Thioesterase: Thioest 99.2 9E-10 2E-14 76.8 13.4 149 8-173 27-229 (229)
114 PF05728 UPF0227: Uncharacteri 99.2 9.6E-10 2.1E-14 74.0 12.2 113 39-173 47-186 (187)
115 KOG4627 Kynurenine formamidase 99.2 1.4E-10 3.1E-15 77.3 7.3 135 4-144 93-248 (270)
116 PF02273 Acyl_transf_2: Acyl t 99.2 2.7E-09 5.9E-14 73.1 13.5 138 5-146 54-240 (294)
117 COG2021 MET2 Homoserine acetyl 99.1 3.3E-09 7.2E-14 77.0 12.5 155 7-175 91-367 (368)
118 KOG1515 Arylacetamide deacetyl 99.1 9.6E-09 2.1E-13 75.0 14.9 159 6-176 121-335 (336)
119 KOG2281 Dipeptidyl aminopeptid 99.1 2.5E-09 5.3E-14 82.2 11.8 155 4-175 672-866 (867)
120 PF03096 Ndr: Ndr family; Int 99.1 1.3E-08 2.7E-13 72.1 13.6 156 6-176 53-279 (283)
121 PF10230 DUF2305: Uncharacteri 99.1 1.8E-08 3.8E-13 72.0 14.6 138 6-144 30-265 (266)
122 KOG2112 Lysophospholipase [Lip 99.1 5.6E-09 1.2E-13 70.0 11.1 114 33-146 74-191 (206)
123 PF07224 Chlorophyllase: Chlor 99.0 2.2E-08 4.8E-13 69.5 13.6 169 4-179 69-277 (307)
124 PRK04940 hypothetical protein; 99.0 3.1E-08 6.7E-13 65.7 13.1 104 51-175 60-179 (180)
125 PF10503 Esterase_phd: Esteras 99.0 1.2E-08 2.6E-13 70.4 11.4 124 6-129 44-196 (220)
126 TIGR03230 lipo_lipase lipoprot 99.0 7.4E-09 1.6E-13 78.1 9.9 77 7-85 72-153 (442)
127 cd00707 Pancreat_lipase_like P 99.0 3.5E-09 7.7E-14 75.9 7.8 78 7-86 65-147 (275)
128 PF06028 DUF915: Alpha/beta hy 98.9 6.8E-08 1.5E-12 68.2 13.6 130 29-173 81-252 (255)
129 PF11339 DUF3141: Protein of u 98.9 6E-08 1.3E-12 73.3 13.9 58 30-87 118-176 (581)
130 PRK10439 enterobactin/ferric e 98.9 1.5E-07 3.2E-12 71.1 15.5 106 39-146 272-394 (411)
131 KOG2931 Differentiation-relate 98.8 7.4E-08 1.6E-12 67.9 10.8 153 8-175 78-305 (326)
132 COG4099 Predicted peptidase [G 98.8 3.3E-08 7.2E-13 69.8 8.0 89 35-129 250-342 (387)
133 PF07819 PGAP1: PGAP1-like pro 98.8 6.9E-08 1.5E-12 67.2 9.6 83 6-90 37-127 (225)
134 PLN02733 phosphatidylcholine-s 98.8 2.8E-08 6.1E-13 75.3 7.3 84 5-90 118-205 (440)
135 PF05677 DUF818: Chlamydia CHL 98.7 4.6E-07 9.9E-12 65.4 10.6 105 6-112 169-300 (365)
136 PF10142 PhoPQ_related: PhoPQ- 98.7 5.1E-07 1.1E-11 66.7 10.9 113 49-178 170-322 (367)
137 KOG3847 Phospholipase A2 (plat 98.7 4E-07 8.7E-12 64.8 9.9 122 50-178 240-373 (399)
138 KOG1553 Predicted alpha/beta h 98.7 2.8E-08 6E-13 71.6 3.9 112 4-118 264-399 (517)
139 PF00756 Esterase: Putative es 98.6 2.8E-07 6E-12 65.2 8.8 108 38-146 100-239 (251)
140 COG2936 Predicted acyl esteras 98.6 1.1E-06 2.3E-11 67.9 11.8 76 4-81 76-154 (563)
141 TIGR03502 lipase_Pla1_cef extr 98.5 3E-07 6.5E-12 73.9 7.3 65 5-71 473-575 (792)
142 KOG2624 Triglyceride lipase-ch 98.5 1.2E-06 2.7E-11 65.5 9.8 162 4-176 102-398 (403)
143 COG1073 Hydrolases of the alph 98.5 5E-08 1.1E-12 70.2 2.4 71 97-177 226-298 (299)
144 PRK10252 entF enterobactin syn 98.5 2.8E-06 6.2E-11 73.0 13.0 136 5-146 1091-1278(1296)
145 KOG3975 Uncharacterized conser 98.5 2.8E-06 6.1E-11 58.8 10.2 116 29-146 87-286 (301)
146 cd00741 Lipase Lipase. Lipase 98.5 1.6E-06 3.5E-11 56.8 8.9 84 34-117 11-98 (153)
147 KOG3101 Esterase D [General fu 98.5 4E-07 8.6E-12 61.4 5.8 96 50-145 140-263 (283)
148 smart00824 PKS_TE Thioesterase 98.5 5.1E-06 1.1E-10 56.7 11.7 136 6-146 23-197 (212)
149 COG4188 Predicted dienelactone 98.4 4.6E-07 1E-11 66.1 4.7 143 4-146 94-298 (365)
150 KOG1551 Uncharacterized conser 98.4 1.4E-05 3.1E-10 55.9 11.2 156 5-176 138-366 (371)
151 PF05705 DUF829: Eukaryotic pr 98.3 1.7E-05 3.6E-10 56.0 10.9 150 7-173 26-240 (240)
152 PF12048 DUF3530: Protein of u 98.2 7.1E-05 1.5E-09 54.7 13.1 125 36-176 179-309 (310)
153 PF05990 DUF900: Alpha/beta hy 98.2 1.1E-05 2.3E-10 56.6 8.3 106 10-119 50-170 (233)
154 COG2382 Fes Enterochelin ester 98.1 6.5E-05 1.4E-09 53.6 10.6 105 41-146 163-283 (299)
155 COG3150 Predicted esterase [Ge 98.1 4.5E-05 9.7E-10 49.8 8.9 103 37-146 45-174 (191)
156 COG3946 VirJ Type IV secretory 98.1 2.4E-05 5.1E-10 57.9 8.4 142 5-174 284-447 (456)
157 KOG2237 Predicted serine prote 98.1 8.9E-05 1.9E-09 57.9 11.4 142 4-146 495-686 (712)
158 COG1505 Serine proteases of th 98.1 3.2E-05 7E-10 59.8 9.0 158 5-177 447-647 (648)
159 PF08386 Abhydrolase_4: TAP-li 98.1 1.8E-05 3.9E-10 48.2 6.2 60 101-174 33-92 (103)
160 COG2819 Predicted hydrolase of 98.1 0.00017 3.7E-09 50.8 11.7 38 50-87 136-173 (264)
161 COG3509 LpqC Poly(3-hydroxybut 98.1 2E-05 4.3E-10 56.0 7.0 171 5-176 88-307 (312)
162 COG1770 PtrB Protease II [Amin 98.1 0.00018 3.8E-09 56.5 12.6 140 2-145 471-658 (682)
163 COG0627 Predicted esterase [Ge 98.1 5.7E-05 1.2E-09 55.1 9.5 113 52-179 153-314 (316)
164 PF01083 Cutinase: Cutinase; 98.0 5.1E-05 1.1E-09 51.0 8.2 106 8-117 39-150 (179)
165 PF02450 LCAT: Lecithin:choles 98.0 2.8E-05 6.2E-10 58.6 7.3 70 14-91 90-165 (389)
166 PF10340 DUF2424: Protein of u 98.0 0.00049 1.1E-08 51.2 12.9 135 8-146 154-352 (374)
167 PF01764 Lipase_3: Lipase (cla 98.0 4.5E-05 9.7E-10 49.0 6.8 38 34-71 47-84 (140)
168 KOG4840 Predicted hydrolases o 97.9 8.7E-05 1.9E-09 50.8 7.9 76 6-83 64-141 (299)
169 COG3319 Thioesterase domains o 97.9 6.4E-05 1.4E-09 53.2 7.0 75 8-86 26-103 (257)
170 cd00519 Lipase_3 Lipase (class 97.8 0.00024 5.2E-09 49.7 8.6 78 35-115 112-194 (229)
171 PF07082 DUF1350: Protein of u 97.7 0.0012 2.5E-08 46.3 10.9 135 5-147 44-208 (250)
172 PF06259 Abhydrolase_8: Alpha/ 97.7 0.0016 3.5E-08 43.6 11.3 81 33-116 90-171 (177)
173 PF00151 Lipase: Lipase; Inte 97.7 0.0001 2.3E-09 54.3 5.8 105 7-114 103-216 (331)
174 KOG2565 Predicted hydrolases o 97.7 0.00043 9.3E-09 51.0 8.5 72 7-80 187-258 (469)
175 COG4814 Uncharacterized protei 97.7 0.0021 4.5E-08 45.1 11.3 127 34-174 119-285 (288)
176 PF05577 Peptidase_S28: Serine 97.6 0.00072 1.6E-08 51.9 9.6 79 7-87 58-149 (434)
177 KOG3724 Negative regulator of 97.6 0.00025 5.5E-09 56.8 6.4 78 8-88 132-222 (973)
178 PF11187 DUF2974: Protein of u 97.5 0.00058 1.3E-08 47.6 6.5 50 36-86 70-123 (224)
179 PLN02408 phospholipase A1 97.4 0.0013 2.7E-08 48.9 7.9 78 36-115 183-267 (365)
180 COG4782 Uncharacterized protei 97.4 0.0021 4.6E-08 47.3 8.7 75 9-83 147-231 (377)
181 PF12146 Hydrolase_4: Putative 97.4 0.00026 5.5E-09 40.9 3.3 36 4-41 39-78 (79)
182 PLN02454 triacylglycerol lipas 97.3 0.00058 1.2E-08 51.4 5.6 38 34-71 209-248 (414)
183 PLN03037 lipase class 3 family 97.3 0.0015 3.3E-08 50.4 7.9 67 51-119 318-391 (525)
184 cd00312 Esterase_lipase Estera 97.3 0.00061 1.3E-08 53.2 5.7 75 8-83 125-210 (493)
185 PLN00413 triacylglycerol lipas 97.3 0.00095 2.1E-08 51.0 6.3 85 36-120 269-365 (479)
186 PF01674 Lipase_2: Lipase (cla 97.3 0.00047 1E-08 47.8 4.4 64 5-71 26-95 (219)
187 COG1075 LipA Predicted acetylt 97.3 0.00063 1.4E-08 50.4 5.3 53 35-87 111-165 (336)
188 PLN02162 triacylglycerol lipas 97.3 0.0011 2.4E-08 50.5 6.5 83 37-119 264-358 (475)
189 PF11288 DUF3089: Protein of u 97.3 0.001 2.2E-08 45.5 5.7 38 34-71 77-115 (207)
190 PLN02310 triacylglycerol lipas 97.2 0.0019 4.1E-08 48.6 7.3 66 51-118 209-280 (405)
191 PLN02847 triacylglycerol lipas 97.2 0.0065 1.4E-07 47.8 9.8 45 40-84 240-286 (633)
192 PF05576 Peptidase_S37: PS-10 97.2 0.0036 7.9E-08 47.0 8.0 73 10-85 90-168 (448)
193 PLN02517 phosphatidylcholine-s 97.1 0.00088 1.9E-08 52.5 4.9 58 31-88 193-265 (642)
194 PTZ00472 serine carboxypeptida 97.1 0.0025 5.5E-08 49.3 7.0 65 7-71 120-191 (462)
195 PLN02571 triacylglycerol lipas 97.0 0.0074 1.6E-07 45.7 8.8 36 36-71 209-246 (413)
196 KOG2369 Lecithin:cholesterol a 97.0 0.0013 2.7E-08 50.0 4.6 62 27-88 158-227 (473)
197 PLN02802 triacylglycerol lipas 97.0 0.0065 1.4E-07 46.9 8.2 76 38-115 315-397 (509)
198 PLN02934 triacylglycerol lipas 97.0 0.0018 4E-08 49.8 5.2 37 35-71 305-341 (515)
199 PF05057 DUF676: Putative seri 96.8 0.0052 1.1E-07 42.7 6.4 21 51-71 78-98 (217)
200 PF11144 DUF2920: Protein of u 96.8 0.074 1.6E-06 40.2 12.5 48 36-83 165-216 (403)
201 PLN02324 triacylglycerol lipas 96.8 0.0033 7.1E-08 47.5 5.3 37 35-71 197-235 (415)
202 PLN02719 triacylglycerol lipas 96.8 0.01 2.2E-07 46.0 7.9 36 36-71 278-318 (518)
203 PLN02753 triacylglycerol lipas 96.6 0.019 4.2E-07 44.6 8.4 36 36-71 292-332 (531)
204 KOG2183 Prolylcarboxypeptidase 96.6 0.007 1.5E-07 45.5 5.8 77 8-86 111-202 (492)
205 PF05277 DUF726: Protein of un 96.6 0.011 2.4E-07 43.8 6.7 68 48-116 217-289 (345)
206 PLN02761 lipase class 3 family 96.6 0.016 3.5E-07 45.0 7.8 36 36-71 273-314 (527)
207 KOG4569 Predicted lipase [Lipi 96.5 0.0084 1.8E-07 44.5 6.0 37 35-71 155-191 (336)
208 COG4287 PqaA PhoPQ-activated p 96.5 0.0062 1.3E-07 45.1 5.1 99 47-146 230-373 (507)
209 COG2272 PnbA Carboxylesterase 96.5 0.0076 1.6E-07 46.3 5.5 80 4-83 120-214 (491)
210 PF00135 COesterase: Carboxyle 96.4 0.011 2.3E-07 46.6 6.4 80 5-84 153-243 (535)
211 COG5153 CVT17 Putative lipase 96.4 0.0081 1.7E-07 43.0 4.8 38 35-72 260-297 (425)
212 KOG4540 Putative lipase essent 96.4 0.0081 1.7E-07 43.0 4.8 38 35-72 260-297 (425)
213 COG4947 Uncharacterized protei 96.3 0.01 2.2E-07 39.3 4.8 40 43-83 93-133 (227)
214 KOG3967 Uncharacterized conser 96.2 0.038 8.3E-07 38.0 7.0 80 5-85 141-226 (297)
215 PF08237 PE-PPE: PE-PPE domain 96.1 0.031 6.8E-07 39.1 6.7 64 8-71 2-68 (225)
216 PF04301 DUF452: Protein of un 95.6 0.15 3.3E-06 35.3 8.0 34 106-143 169-202 (213)
217 KOG2521 Uncharacterized conser 95.2 0.44 9.5E-06 35.6 9.9 64 102-177 225-291 (350)
218 PLN02633 palmitoyl protein thi 95.2 0.19 4.2E-06 36.7 7.8 54 31-86 76-131 (314)
219 KOG2182 Hydrolytic enzymes of 95.1 0.084 1.8E-06 40.8 6.0 80 6-87 116-208 (514)
220 PLN02606 palmitoyl-protein thi 94.3 0.2 4.4E-06 36.5 6.0 54 31-86 77-132 (306)
221 PF06850 PHB_depo_C: PHB de-po 94.1 0.19 4.1E-06 34.2 5.2 64 102-176 134-202 (202)
222 PF07519 Tannase: Tannase and 93.9 0.068 1.5E-06 41.7 3.4 61 104-175 355-426 (474)
223 KOG2541 Palmitoyl protein thio 93.8 0.35 7.5E-06 34.6 6.3 76 6-86 51-128 (296)
224 PF02089 Palm_thioest: Palmito 93.7 0.36 7.9E-06 34.8 6.5 36 52-87 81-117 (279)
225 KOG2029 Uncharacterized conser 93.4 0.22 4.8E-06 39.5 5.2 40 32-71 505-546 (697)
226 PTZ00472 serine carboxypeptida 93.3 0.4 8.7E-06 37.4 6.6 61 102-175 364-458 (462)
227 PF00450 Peptidase_S10: Serine 92.9 0.4 8.6E-06 36.6 6.1 59 103-174 331-414 (415)
228 PF00450 Peptidase_S10: Serine 92.2 0.64 1.4E-05 35.5 6.4 75 7-83 84-178 (415)
229 PF03283 PAE: Pectinacetyleste 92.1 0.59 1.3E-05 35.3 6.0 38 34-71 137-176 (361)
230 PLN02213 sinapoylglucose-malat 91.2 0.91 2E-05 33.6 6.1 59 103-175 234-316 (319)
231 PF07519 Tannase: Tannase and 90.6 1.5 3.3E-05 34.4 7.1 81 4-84 55-148 (474)
232 KOG1516 Carboxylesterase and r 90.4 1.4 2.9E-05 35.2 6.8 64 6-71 142-215 (545)
233 KOG2385 Uncharacterized conser 89.2 2.1 4.7E-05 33.7 6.6 40 48-87 444-488 (633)
234 PLN02209 serine carboxypeptida 89.0 1.8 4E-05 33.6 6.3 60 102-175 351-434 (437)
235 PLN02213 sinapoylglucose-malat 89.0 2.3 5E-05 31.5 6.7 62 10-71 3-71 (319)
236 KOG1282 Serine carboxypeptidas 88.8 1.2 2.7E-05 34.6 5.3 60 103-175 364-447 (454)
237 PLN03016 sinapoylglucose-malat 87.7 2.5 5.5E-05 32.8 6.3 60 102-175 347-430 (433)
238 COG2939 Carboxypeptidase C (ca 86.9 1.2 2.5E-05 34.9 4.1 110 30-140 172-290 (498)
239 PF10605 3HBOH: 3HB-oligomer h 86.2 1.9 4.1E-05 34.7 4.9 42 102-143 555-603 (690)
240 KOG4388 Hormone-sensitive lipa 85.3 1.7 3.6E-05 34.9 4.2 59 7-71 426-489 (880)
241 PLN03016 sinapoylglucose-malat 82.8 2.9 6.4E-05 32.5 4.7 62 8-71 115-185 (433)
242 PLN02209 serine carboxypeptida 82.5 3.2 6.9E-05 32.3 4.8 64 8-71 117-187 (437)
243 PF09994 DUF2235: Uncharacteri 82.2 3.6 7.7E-05 29.9 4.8 38 34-71 74-112 (277)
244 COG3673 Uncharacterized conser 80.7 9.8 0.00021 28.4 6.4 65 7-71 63-142 (423)
245 KOG1283 Serine carboxypeptidas 77.7 7.4 0.00016 29.0 5.0 62 10-71 73-142 (414)
246 TIGR02690 resist_ArsH arsenica 74.6 9.2 0.0002 26.8 4.7 35 35-70 107-147 (219)
247 PF10081 Abhydrolase_9: Alpha/ 73.0 26 0.00056 25.7 6.7 36 52-87 110-148 (289)
248 COG0552 FtsY Signal recognitio 72.8 38 0.00083 25.5 7.9 97 5-110 218-319 (340)
249 COG2830 Uncharacterized protei 71.7 11 0.00025 25.0 4.3 34 108-145 170-203 (214)
250 KOG1202 Animal-type fatty acid 69.5 17 0.00036 32.6 5.8 45 39-83 2170-2216(2376)
251 PF05577 Peptidase_S28: Serine 69.3 12 0.00026 29.1 4.8 42 103-148 377-418 (434)
252 cd07198 Patatin Patatin-like p 69.3 10 0.00022 25.2 4.0 33 39-72 15-47 (172)
253 PRK10279 hypothetical protein; 68.7 8.8 0.00019 28.3 3.8 32 39-71 22-53 (300)
254 PF12146 Hydrolase_4: Putative 68.1 11 0.00023 21.6 3.4 62 102-173 16-78 (79)
255 cd07207 Pat_ExoU_VipD_like Exo 67.5 10 0.00023 25.6 3.8 32 39-71 16-47 (194)
256 PF09419 PGP_phosphatase: Mito 67.5 17 0.00036 24.4 4.6 54 4-62 36-89 (168)
257 cd07212 Pat_PNPLA9 Patatin-lik 66.7 5.2 0.00011 29.6 2.3 18 54-71 35-52 (312)
258 cd07225 Pat_PNPLA6_PNPLA7 Pata 65.7 11 0.00024 27.9 3.8 31 40-71 33-63 (306)
259 cd07210 Pat_hypo_W_succinogene 65.7 14 0.00031 25.8 4.3 21 51-71 28-48 (221)
260 COG4553 DepA Poly-beta-hydroxy 63.2 61 0.0013 24.2 10.4 65 103-177 340-408 (415)
261 PF12242 Eno-Rase_NADH_b: NAD( 63.1 27 0.00058 20.0 4.9 44 29-72 15-61 (78)
262 cd07230 Pat_TGL4-5_like Triacy 62.7 9.6 0.00021 29.6 3.1 35 40-75 91-125 (421)
263 cd07228 Pat_NTE_like_bacteria 62.6 16 0.00035 24.3 3.9 32 40-72 18-49 (175)
264 TIGR03131 malonate_mdcH malona 62.2 18 0.0004 26.3 4.5 23 48-70 73-95 (295)
265 cd07205 Pat_PNPLA6_PNPLA7_NTE1 61.4 19 0.00041 23.9 4.1 31 40-71 18-48 (175)
266 cd07213 Pat17_PNPLA8_PNPLA9_li 61.2 40 0.00087 24.6 6.0 19 53-71 36-54 (288)
267 cd07227 Pat_Fungal_NTE1 Fungal 60.9 16 0.00035 26.5 3.8 32 39-71 27-58 (269)
268 cd07209 Pat_hypo_Ecoli_Z1214_l 60.9 17 0.00036 25.3 3.9 33 40-73 16-48 (215)
269 PF00698 Acyl_transf_1: Acyl t 60.2 11 0.00025 27.8 3.1 25 46-70 79-103 (318)
270 TIGR03712 acc_sec_asp2 accesso 59.9 89 0.0019 25.0 13.1 50 35-87 339-390 (511)
271 COG0431 Predicted flavoprotein 58.9 22 0.00048 24.0 4.1 37 35-71 84-121 (184)
272 smart00827 PKS_AT Acyl transfe 58.6 22 0.00049 25.8 4.4 24 47-70 78-101 (298)
273 KOG0781 Signal recognition par 58.5 61 0.0013 25.9 6.6 95 6-113 464-569 (587)
274 cd07211 Pat_PNPLA8 Patatin-lik 58.3 8.7 0.00019 28.3 2.2 17 54-70 44-60 (308)
275 cd07232 Pat_PLPL Patain-like p 57.9 13 0.00028 28.8 3.1 34 39-73 84-117 (407)
276 cd07208 Pat_hypo_Ecoli_yjju_li 57.9 11 0.00024 27.1 2.6 20 53-72 29-48 (266)
277 PF14253 AbiH: Bacteriophage a 54.6 13 0.00029 26.5 2.7 15 49-63 233-247 (270)
278 cd07217 Pat17_PNPLA8_PNPLA9_li 54.4 12 0.00026 28.2 2.4 18 54-71 44-61 (344)
279 TIGR00128 fabD malonyl CoA-acy 54.3 28 0.0006 25.2 4.3 22 50-71 82-103 (290)
280 PF09949 DUF2183: Uncharacteri 53.9 48 0.001 20.1 5.0 43 39-81 53-97 (100)
281 COG1752 RssA Predicted esteras 53.8 23 0.0005 26.1 3.8 30 41-71 30-59 (306)
282 cd07224 Pat_like Patatin-like 53.5 26 0.00056 24.8 3.8 35 39-73 16-51 (233)
283 PF01734 Patatin: Patatin-like 52.4 14 0.00031 24.3 2.4 20 52-71 28-47 (204)
284 cd07216 Pat17_PNPLA8_PNPLA9_li 52.2 11 0.00024 27.8 2.0 17 54-70 45-61 (309)
285 cd07229 Pat_TGL3_like Triacylg 51.9 20 0.00044 27.6 3.2 32 41-73 102-133 (391)
286 cd07218 Pat_iPLA2 Calcium-inde 51.4 31 0.00067 24.7 4.0 18 55-72 34-51 (245)
287 cd07214 Pat17_isozyme_like Pat 50.4 13 0.00028 28.1 2.0 18 54-71 46-63 (349)
288 cd07231 Pat_SDP1-like Sugar-De 50.3 22 0.00047 26.6 3.1 31 41-72 87-117 (323)
289 PF09370 TIM-br_sig_trns: TIM- 50.2 31 0.00068 25.0 3.8 88 53-143 15-121 (268)
290 PRK03482 phosphoglycerate muta 49.6 84 0.0018 21.6 6.3 39 29-69 121-159 (215)
291 PF06500 DUF1100: Alpha/beta h 49.4 16 0.00034 28.3 2.3 65 101-176 188-255 (411)
292 PRK05368 homoserine O-succinyl 49.4 38 0.00083 25.1 4.2 34 34-71 121-154 (302)
293 PF10561 UPF0565: Uncharacteri 49.2 14 0.00031 27.3 2.0 20 52-71 194-213 (303)
294 cd07206 Pat_TGL3-4-5_SDP1 Tria 48.8 27 0.00058 25.8 3.4 20 52-71 98-117 (298)
295 KOG1282 Serine carboxypeptidas 48.1 70 0.0015 25.3 5.7 24 48-71 165-188 (454)
296 cd07199 Pat17_PNPLA8_PNPLA9_li 48.1 16 0.00034 26.2 2.1 18 54-71 37-54 (258)
297 KOG4231 Intracellular membrane 48.0 17 0.00038 29.0 2.4 17 55-71 454-470 (763)
298 PLN02578 hydrolase 47.6 1.2E+02 0.0026 22.8 7.1 65 102-177 86-150 (354)
299 KOG2182 Hydrolytic enzymes of 47.5 60 0.0013 25.9 5.2 70 102-176 433-502 (514)
300 COG3621 Patatin [General funct 46.9 1E+02 0.0022 23.4 6.0 55 8-72 8-63 (394)
301 COG0331 FabD (acyl-carrier-pro 46.5 34 0.00074 25.5 3.7 28 43-70 76-104 (310)
302 PRK07877 hypothetical protein; 46.4 1.7E+02 0.0036 24.9 7.8 79 47-139 104-183 (722)
303 cd07215 Pat17_PNPLA8_PNPLA9_li 46.3 16 0.00035 27.3 2.0 17 54-70 43-59 (329)
304 TIGR02816 pfaB_fam PfaB family 46.1 31 0.00067 27.9 3.6 26 46-71 260-285 (538)
305 COG3887 Predicted signaling pr 45.9 1.5E+02 0.0032 24.5 7.1 40 34-75 323-368 (655)
306 PF08484 Methyltransf_14: C-me 45.9 87 0.0019 20.8 5.7 33 49-81 67-99 (160)
307 COG3675 Predicted lipase [Lipi 44.7 20 0.00044 26.3 2.2 34 37-70 160-194 (332)
308 PRK14194 bifunctional 5,10-met 44.4 44 0.00096 24.8 3.9 37 35-71 144-182 (301)
309 KOG1202 Animal-type fatty acid 43.7 2.7E+02 0.0059 25.8 9.3 39 108-146 651-693 (2376)
310 cd03131 GATase1_HTS Type 1 glu 43.4 17 0.00037 24.5 1.6 35 33-71 83-117 (175)
311 cd07204 Pat_PNPLA_like Patatin 42.9 25 0.00055 25.0 2.5 19 54-72 34-52 (243)
312 KOG4372 Predicted alpha/beta h 42.2 13 0.00029 28.5 1.0 22 50-71 149-170 (405)
313 TIGR02240 PHA_depoly_arom poly 41.9 1.3E+02 0.0027 21.5 7.1 42 102-146 25-66 (276)
314 PRK13936 phosphoheptose isomer 41.4 1.1E+02 0.0025 20.8 7.1 23 49-71 42-64 (197)
315 KOG4389 Acetylcholinesterase/B 41.2 80 0.0017 25.4 5.0 58 6-65 164-232 (601)
316 PRK13938 phosphoheptose isomer 40.8 1.2E+02 0.0026 20.9 6.7 38 35-72 29-67 (196)
317 KOG4530 Predicted flavoprotein 40.6 58 0.0013 21.7 3.6 28 35-64 103-130 (199)
318 PF12641 Flavodoxin_3: Flavodo 38.7 1.2E+02 0.0025 20.2 6.6 38 104-142 41-78 (160)
319 PRK10886 DnaA initiator-associ 38.5 1.3E+02 0.0028 20.7 6.4 37 35-71 25-62 (196)
320 KOG2214 Predicted esterase of 38.2 15 0.00033 29.1 0.8 29 52-80 203-231 (543)
321 cd07221 Pat_PNPLA3 Patatin-lik 38.2 64 0.0014 23.2 3.9 20 53-72 34-53 (252)
322 cd07222 Pat_PNPLA4 Patatin-lik 37.9 33 0.00073 24.4 2.5 17 54-70 34-50 (246)
323 PRK10673 acyl-CoA esterase; Pr 37.6 1.4E+02 0.003 20.7 6.4 42 102-146 16-57 (255)
324 KOG4287 Pectin acetylesterase 37.3 9.8 0.00021 28.6 -0.3 38 34-71 157-196 (402)
325 PRK05665 amidotransferase; Pro 36.7 95 0.0021 22.1 4.6 17 53-69 92-108 (240)
326 PF03681 UPF0150: Uncharacteri 36.6 41 0.00088 16.9 2.1 15 5-19 10-24 (48)
327 TIGR03607 patatin-related prot 36.5 31 0.00068 29.0 2.4 19 52-70 67-85 (739)
328 COG1576 Uncharacterized conser 35.9 1.1E+02 0.0025 20.2 4.4 54 3-68 62-115 (155)
329 KOG3734 Predicted phosphoglyce 35.8 1.1E+02 0.0023 22.5 4.6 43 27-69 171-213 (272)
330 cd08770 DAP_dppA_3 Peptidase M 35.7 1.2E+02 0.0026 22.1 4.9 35 98-139 143-177 (263)
331 COG0813 DeoD Purine-nucleoside 35.5 68 0.0015 22.7 3.5 36 48-83 53-90 (236)
332 TIGR03127 RuMP_HxlB 6-phospho 35.4 1.3E+02 0.0029 19.9 6.7 34 35-71 18-51 (179)
333 COG0794 GutQ Predicted sugar p 35.3 1.5E+02 0.0034 20.6 5.9 76 36-115 27-126 (202)
334 cd01819 Patatin_and_cPLA2 Pata 35.1 42 0.00092 21.9 2.5 18 52-69 29-46 (155)
335 cd01714 ETF_beta The electron 34.5 1.4E+02 0.0031 20.5 5.1 44 36-80 95-143 (202)
336 cd07220 Pat_PNPLA2 Patatin-lik 34.3 37 0.0008 24.3 2.2 20 53-72 38-57 (249)
337 PF04446 Thg1: tRNAHis guanyly 34.0 1.3E+02 0.0028 19.4 4.8 54 5-59 17-73 (135)
338 COG3868 Uncharacterized conser 33.7 94 0.002 23.0 4.1 62 4-71 98-160 (306)
339 COG3007 Uncharacterized paraqu 33.4 1.3E+02 0.0029 22.5 4.8 42 32-73 19-64 (398)
340 PF08218 Citrate_ly_lig: Citra 33.3 1.5E+02 0.0032 20.3 4.7 69 76-144 1-70 (182)
341 COG4822 CbiK Cobalamin biosynt 32.4 1.8E+02 0.004 20.6 8.2 78 35-112 118-208 (265)
342 PF01380 SIS: SIS domain SIS d 32.3 1.2E+02 0.0027 18.5 4.5 23 50-72 5-27 (131)
343 PHA00490 terminal protein 32.2 69 0.0015 22.2 3.1 45 34-79 98-142 (266)
344 cd03129 GAT1_Peptidase_E_like 31.0 78 0.0017 21.8 3.4 27 41-68 104-130 (210)
345 PF07643 DUF1598: Protein of u 30.7 1.2E+02 0.0025 17.8 3.8 33 39-71 31-63 (84)
346 cd05005 SIS_PHI Hexulose-6-pho 30.2 1.7E+02 0.0037 19.5 6.7 33 36-71 22-54 (179)
347 PRK04148 hypothetical protein; 30.1 1.3E+02 0.0027 19.4 3.9 21 51-71 18-38 (134)
348 PF00091 Tubulin: Tubulin/FtsZ 30.0 96 0.0021 21.5 3.7 34 36-69 109-142 (216)
349 PF04422 FrhB_FdhB_N: Coenzyme 29.9 64 0.0014 18.5 2.4 29 55-83 14-43 (82)
350 PF05003 DUF668: Protein of un 29.7 1.3E+02 0.0028 17.9 3.5 52 112-174 24-81 (89)
351 PF13519 VWA_2: von Willebrand 29.2 1.3E+02 0.0028 19.2 4.1 49 10-62 2-50 (172)
352 PF15566 Imm18: Immunity prote 28.9 97 0.0021 16.3 2.7 28 36-63 6-33 (52)
353 PLN02752 [acyl-carrier protein 27.7 49 0.0011 24.8 2.1 17 54-70 127-143 (343)
354 COG0541 Ffh Signal recognition 27.6 3.2E+02 0.0069 21.8 6.6 65 6-81 180-246 (451)
355 cd07219 Pat_PNPLA1 Patatin-lik 27.2 57 0.0012 25.1 2.3 18 54-71 47-64 (382)
356 PRK12467 peptide synthase; Pro 27.1 4.1E+02 0.0089 27.9 8.2 60 8-71 3718-3777(3956)
357 PF01118 Semialdhyde_dh: Semia 27.0 67 0.0015 19.8 2.3 31 52-83 1-32 (121)
358 PRK14852 hypothetical protein; 26.9 3.8E+02 0.0083 23.9 7.1 34 47-83 329-363 (989)
359 PF04204 HTS: Homoserine O-suc 26.8 2.6E+02 0.0057 20.9 5.5 45 33-81 119-168 (298)
360 cd01453 vWA_transcription_fact 26.6 2.1E+02 0.0045 19.3 5.1 50 10-59 6-55 (183)
361 PRK09065 glutamine amidotransf 26.3 1.6E+02 0.0035 20.9 4.3 31 35-69 75-105 (237)
362 COG4667 Predicted esterase of 26.0 70 0.0015 23.4 2.4 27 54-80 43-69 (292)
363 PF03575 Peptidase_S51: Peptid 25.8 67 0.0014 20.9 2.2 12 53-64 70-81 (154)
364 PRK06490 glutamine amidotransf 25.7 1.9E+02 0.0042 20.5 4.6 18 52-69 86-103 (239)
365 PF02590 SPOUT_MTase: Predicte 25.4 1.1E+02 0.0025 20.1 3.2 46 6-62 65-110 (155)
366 PRK09120 p-hydroxycinnamoyl Co 25.2 2.3E+02 0.005 20.6 5.1 53 7-65 16-72 (275)
367 COG0708 XthA Exonuclease III [ 25.1 2.8E+02 0.006 20.3 5.5 49 7-58 99-148 (261)
368 PF08496 Peptidase_S49_N: Pept 25.0 1.7E+02 0.0038 19.3 3.9 49 8-64 97-145 (155)
369 PF02882 THF_DHG_CYH_C: Tetrah 24.0 1.7E+02 0.0036 19.5 3.8 37 35-71 21-59 (160)
370 PF14084 DUF4264: Protein of u 23.9 54 0.0012 17.2 1.2 12 168-179 18-29 (52)
371 PF00448 SRP54: SRP54-type pro 23.5 2.5E+02 0.0055 19.2 6.4 91 7-113 82-178 (196)
372 PF14987 NADHdh_A3: NADH dehyd 23.5 1.3E+02 0.0029 17.3 2.7 28 40-67 5-32 (84)
373 PRK13462 acid phosphatase; Pro 23.2 2.6E+02 0.0056 19.2 5.6 32 28-59 117-148 (203)
374 cd05007 SIS_Etherase N-acetylm 23.2 2.3E+02 0.005 20.4 4.7 24 49-72 48-71 (257)
375 PRK10416 signal recognition pa 23.2 3.3E+02 0.0071 20.4 8.0 99 5-112 193-296 (318)
376 PF14350 Beta_protein: Beta pr 22.8 2.9E+02 0.0063 20.8 5.4 22 41-62 181-202 (347)
377 cd00382 beta_CA Carbonic anhyd 22.6 1.4E+02 0.0031 18.5 3.2 30 36-65 44-73 (119)
378 COG5023 Tubulin [Cytoskeleton] 22.4 1.1E+02 0.0025 23.5 3.0 35 32-66 111-145 (443)
379 PF09345 DUF1987: Domain of un 21.6 1.6E+02 0.0034 17.8 3.0 21 159-179 20-40 (99)
380 PRK03204 haloalkane dehalogena 21.4 3.2E+02 0.007 19.7 6.8 42 102-146 34-75 (286)
381 smart00864 Tubulin Tubulin/Fts 21.3 1.9E+02 0.0042 19.6 3.8 31 32-65 67-97 (192)
382 cd01080 NAD_bind_m-THF_DH_Cycl 21.2 2.4E+02 0.0052 18.8 4.2 37 35-71 29-66 (168)
383 TIGR01203 HGPRTase hypoxanthin 21.2 2.6E+02 0.0056 18.5 5.2 41 31-71 6-46 (166)
384 COG1092 Predicted SAM-dependen 21.0 2.9E+02 0.0063 21.6 5.0 52 8-63 290-341 (393)
385 PRK06127 enoyl-CoA hydratase; 20.9 3.3E+02 0.0072 19.6 5.4 36 6-47 18-53 (269)
386 PRK13690 hypothetical protein; 20.8 2.9E+02 0.0062 18.9 4.5 32 30-61 3-36 (184)
387 PRK08321 naphthoate synthase; 20.6 3.2E+02 0.0069 20.2 5.1 52 7-65 33-96 (302)
388 PRK00103 rRNA large subunit me 20.5 2.7E+02 0.0058 18.4 4.2 10 52-61 100-109 (157)
389 KOG2961 Predicted hydrolase (H 20.4 2.5E+02 0.0054 18.8 3.9 51 7-62 41-91 (190)
390 cd00883 beta_CA_cladeA Carboni 20.3 1.7E+02 0.0037 19.8 3.4 33 37-69 67-99 (182)
391 PF06833 MdcE: Malonate decarb 20.1 3E+02 0.0065 19.7 4.5 61 7-67 64-124 (234)
392 KOG3086 Predicted dioxygenase 20.1 3.6E+02 0.0077 19.7 5.0 59 27-85 16-78 (296)
No 1
>PHA02857 monoglyceride lipase; Provisional
Probab=99.93 E-value=3.5e-24 Score=153.43 Aligned_cols=161 Identities=18% Similarity=0.294 Sum_probs=123.7
Q ss_pred cCCceEEEEEeccCCCCCCCCC----CCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEE
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKA----PPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVL 80 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~ 80 (180)
+.+||.|+++|+||+ |.+.. ........+++.+.+..+...++..+++++||||||.+++.++.++|+.+++++
T Consensus 49 ~~~g~~via~D~~G~--G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~li 126 (276)
T PHA02857 49 SSLGILVFSHDHIGH--GRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMI 126 (276)
T ss_pred HhCCCEEEEccCCCC--CCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEE
Confidence 457999999999999 44332 134445566777777776666666789999999999999999999888899999
Q ss_pred EeccCCCCC-----------------Cc---------cc---------------------c--------------hhhhc
Q 030264 81 CLGYPLKGM-----------------NG---------AV---------------------R--------------DELLL 99 (180)
Q Consensus 81 ~~~~~~~~~-----------------~~---------~~---------------------~--------------~~~~~ 99 (180)
++++..... +. .. . .+.+.
T Consensus 127 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 206 (276)
T PHA02857 127 LMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIP 206 (276)
T ss_pred EeccccccccccHHHHHHHHHHHHhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcc
Confidence 987532100 00 00 0 12356
Q ss_pred cCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHhh
Q 030264 100 QITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSL 177 (180)
Q Consensus 100 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 177 (180)
++++|+|+++|++|.++|++.+.++.+.+..++++.++++++|.++...+ +..+++++.+.+||+++.
T Consensus 207 ~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~----------~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 207 KIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETD----------EVKKSVMKEIETWIFNRV 274 (276)
T ss_pred cCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCch----------hHHHHHHHHHHHHHHHhc
Confidence 78899999999999999999999999887656899999999999886432 457889999999999863
No 2
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.93 E-value=1.9e-24 Score=150.40 Aligned_cols=163 Identities=21% Similarity=0.273 Sum_probs=130.8
Q ss_pred ccCCceEEEEEeccCCC--CCCCCCCCchHHHHHHHHHHHHHHHh--hCCCCcEEEEeeChhHHHHHHHhhccccccceE
Q 030264 4 KALDAVEVVTFDYPYIA--GGKRKAPPKAEKLVEFHTDVVKGAVA--KFPGHPLILAGKSMGSRVSCMVACKEDIAASAV 79 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~--~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~ 79 (180)
++..||.|+++|++|++ +|.+..-..+....+|+...++.++. ++.+.+.+++||||||.+++.++.++|...+++
T Consensus 78 l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ 157 (313)
T KOG1455|consen 78 LAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGA 157 (313)
T ss_pred HHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccc
Confidence 46789999999999985 34444557777888888888887555 466779999999999999999999999999999
Q ss_pred EEeccCCCCCC---------------------------c------cc---------------------------------
Q 030264 80 LCLGYPLKGMN---------------------------G------AV--------------------------------- 93 (180)
Q Consensus 80 ~~~~~~~~~~~---------------------------~------~~--------------------------------- 93 (180)
+++++ +-... . .+
T Consensus 158 ilvaP-mc~i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~ 236 (313)
T KOG1455|consen 158 ILVAP-MCKISEDTKPHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTA 236 (313)
T ss_pred eeeec-ccccCCccCCCcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHH
Confidence 99773 11000 0 00
Q ss_pred -chhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCC-cEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHH
Q 030264 94 -RDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSL-SELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAA 171 (180)
Q Consensus 94 -~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 171 (180)
..+.+.+++.|.+++||++|.++++..++++++...+. .++++|||.-|.+..... +++.+.+...|.+
T Consensus 237 ~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~---------~en~e~Vf~DI~~ 307 (313)
T KOG1455|consen 237 DLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEP---------DENVEIVFGDIIS 307 (313)
T ss_pred HHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCC---------chhHHHHHHHHHH
Confidence 01256788999999999999999999999999998766 999999999999775221 1788999999999
Q ss_pred HHHHh
Q 030264 172 FISKS 176 (180)
Q Consensus 172 fl~~~ 176 (180)
||+++
T Consensus 308 Wl~~r 312 (313)
T KOG1455|consen 308 WLDER 312 (313)
T ss_pred HHHhc
Confidence 99875
No 3
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.92 E-value=3.3e-23 Score=151.95 Aligned_cols=163 Identities=19% Similarity=0.262 Sum_probs=122.4
Q ss_pred cCCceEEEEEeccCCCCCCCCC----CCchHHHHHHHHHHHHHHHhh--CCCCcEEEEeeChhHHHHHHHhhccccccce
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKA----PPKAEKLVEFHTDVVKGAVAK--FPGHPLILAGKSMGSRVSCMVACKEDIAASA 78 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~ 78 (180)
+++||+|+++|+||+| .+.. ........+|+..+++.+... .+..+++++||||||.+++.++.++|..+++
T Consensus 84 ~~~Gy~V~~~D~rGhG--~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~ 161 (330)
T PLN02298 84 AQMGFACFALDLEGHG--RSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDG 161 (330)
T ss_pred HhCCCEEEEecCCCCC--CCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCccccee
Confidence 4679999999999994 4332 234556678888888888763 3445899999999999999999998889999
Q ss_pred EEEeccCCCCC--------------------------C--c----c----------------c-----------------
Q 030264 79 VLCLGYPLKGM--------------------------N--G----A----------------V----------------- 93 (180)
Q Consensus 79 ~~~~~~~~~~~--------------------------~--~----~----------------~----------------- 93 (180)
++++++..... . . . +
T Consensus 162 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (330)
T PLN02298 162 AVLVAPMCKISDKIRPPWPIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTD 241 (330)
T ss_pred EEEecccccCCcccCCchHHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHH
Confidence 99877432100 0 0 0 0
Q ss_pred -chhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccC-CcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHH
Q 030264 94 -RDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKS-LSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAA 171 (180)
Q Consensus 94 -~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 171 (180)
....+.++++|+|+++|++|.++|++.++++++.++. +++++++++++|.+....+ ....+.+.+.+.+
T Consensus 242 ~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~p---------d~~~~~~~~~i~~ 312 (330)
T PLN02298 242 YLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEP---------DENIEIVRRDILS 312 (330)
T ss_pred HHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCC---------HHHHHHHHHHHHH
Confidence 0012456789999999999999999999999888753 4899999999999765321 0334678899999
Q ss_pred HHHHhhc
Q 030264 172 FISKSLG 178 (180)
Q Consensus 172 fl~~~~~ 178 (180)
||.+++.
T Consensus 313 fl~~~~~ 319 (330)
T PLN02298 313 WLNERCT 319 (330)
T ss_pred HHHHhcc
Confidence 9998764
No 4
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.92 E-value=1.9e-23 Score=154.30 Aligned_cols=164 Identities=23% Similarity=0.302 Sum_probs=121.4
Q ss_pred cCCceEEEEEeccCCCCCCCCCC----CchHHHHHHHHHHHHHHHhh--CCCCcEEEEeeChhHHHHHHHhhccccccce
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAP----PKAEKLVEFHTDVVKGAVAK--FPGHPLILAGKSMGSRVSCMVACKEDIAASA 78 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~ 78 (180)
+.+||+|+++|+||+ |.+... .......+++.+.++.+... ++..+++++||||||.+++.++.++|..+++
T Consensus 112 ~~~g~~v~~~D~~G~--G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~g 189 (349)
T PLN02385 112 ASSGYGVFAMDYPGF--GLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDG 189 (349)
T ss_pred HhCCCEEEEecCCCC--CCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhh
Confidence 456999999999999 444322 34556667777777776542 3445899999999999999999999999999
Q ss_pred EEEeccCCC------C----------------------CC---cc-cc--------------------------------
Q 030264 79 VLCLGYPLK------G----------------------MN---GA-VR-------------------------------- 94 (180)
Q Consensus 79 ~~~~~~~~~------~----------------------~~---~~-~~-------------------------------- 94 (180)
+|++++... . .. .. +.
T Consensus 190 lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 269 (349)
T PLN02385 190 AILVAPMCKIADDVVPPPLVLQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQ 269 (349)
T ss_pred eeEecccccccccccCchHHHHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHH
Confidence 998773210 0 00 00 00
Q ss_pred --hhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccC-CcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHH
Q 030264 95 --DELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKS-LSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAA 171 (180)
Q Consensus 95 --~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 171 (180)
...+.++++|+|+++|++|.++|++.++.+++.+.. +++++++++++|.+....+ .+..+.+++.+.+
T Consensus 270 ~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p---------~~~~~~v~~~i~~ 340 (349)
T PLN02385 270 EIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEP---------DEMIFQVLDDIIS 340 (349)
T ss_pred HHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCC---------hhhHHHHHHHHHH
Confidence 012456889999999999999999999999988753 4899999999999775332 1235568999999
Q ss_pred HHHHhhcC
Q 030264 172 FISKSLGE 179 (180)
Q Consensus 172 fl~~~~~~ 179 (180)
||++++.+
T Consensus 341 wL~~~~~~ 348 (349)
T PLN02385 341 WLDSHSTQ 348 (349)
T ss_pred HHHHhccC
Confidence 99988753
No 5
>PRK10749 lysophospholipase L2; Provisional
Probab=99.91 E-value=1.4e-22 Score=148.54 Aligned_cols=161 Identities=13% Similarity=0.082 Sum_probs=119.1
Q ss_pred ccCCceEEEEEeccCCCCCCCCCC---------CchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcccc
Q 030264 4 KALDAVEVVTFDYPYIAGGKRKAP---------PKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI 74 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~ 74 (180)
.+++||+|+++|+||+| .+... .......+++..+++.+....+..+++++||||||.+++.++.++|.
T Consensus 77 l~~~g~~v~~~D~~G~G--~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~ 154 (330)
T PRK10749 77 LFHLGYDVLIIDHRGQG--RSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPG 154 (330)
T ss_pred HHHCCCeEEEEcCCCCC--CCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCC
Confidence 35689999999999994 33221 24555667777777766555566799999999999999999999999
Q ss_pred ccceEEEeccCCCC---CC-----------------------------------------c-c----------cc-----
Q 030264 75 AASAVLCLGYPLKG---MN-----------------------------------------G-A----------VR----- 94 (180)
Q Consensus 75 ~~~~~~~~~~~~~~---~~-----------------------------------------~-~----------~~----- 94 (180)
.+++++++++.... .+ . . .+
T Consensus 155 ~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 234 (330)
T PRK10749 155 VFDAIALCAPMFGIVLPLPSWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVG 234 (330)
T ss_pred CcceEEEECchhccCCCCCcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccC
Confidence 99999987743210 00 0 0 00
Q ss_pred -----------------hhhhccCCCcEEEEeecCCCCCChHHHHHHHHHcc------CCcEEEEEcCCCCccccccccc
Q 030264 95 -----------------DELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMK------SLSELHLIDGGDHSFKIGKKHL 151 (180)
Q Consensus 95 -----------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~------~~~~~~~~~~~~H~~~~~~~~~ 151 (180)
...+.++++|+|+++|++|++++++.+..+++.++ .++++++++|++|..+...+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~-- 312 (330)
T PRK10749 235 GPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKD-- 312 (330)
T ss_pred CCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCc--
Confidence 01235678999999999999999999888887663 23689999999999776332
Q ss_pred cccccchhHHHHHHHHHHHHHHHHh
Q 030264 152 QTMGTTQDEMEGLAVQAIAAFISKS 176 (180)
Q Consensus 152 ~~~~~~~~~~~~~~~~~i~~fl~~~ 176 (180)
...+.+++.+.+||+++
T Consensus 313 --------~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 313 --------AMRSVALNAIVDFFNRH 329 (330)
T ss_pred --------HHHHHHHHHHHHHHhhc
Confidence 33578999999999864
No 6
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.90 E-value=2.8e-22 Score=138.52 Aligned_cols=162 Identities=15% Similarity=0.131 Sum_probs=118.5
Q ss_pred cCCceEEEEEeccCCCCCC------CCCCCchHHHHHHHHHHHHHHHhhC--CCCcEEEEeeChhHHHHHHHhhcccccc
Q 030264 5 ALDAVEVVTFDYPYIAGGK------RKAPPKAEKLVEFHTDVVKGAVAKF--PGHPLILAGKSMGSRVSCMVACKEDIAA 76 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~~ 76 (180)
+++||.|+.+|+||.+ |. ...........+|+..+++++.+.. +.++|+++|+|+||.+++.++.+++..+
T Consensus 11 a~~Gy~v~~~~~rGs~-g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f 89 (213)
T PF00326_consen 11 ASQGYAVLVPNYRGSG-GYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDRF 89 (213)
T ss_dssp HTTT-EEEEEE-TTSS-SSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCGS
T ss_pred HhCCEEEEEEcCCCCC-ccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccceee
Confidence 5799999999999964 11 1111222344688888899988764 4469999999999999999999888999
Q ss_pred ceEEEeccCCCCCCc--c---c----------------------chhhhcc--CCCcEEEEeecCCCCCChHHHHHHHHH
Q 030264 77 SAVLCLGYPLKGMNG--A---V----------------------RDELLLQ--ITVPIMFVQGSKDGLCPLDKLEAVRKK 127 (180)
Q Consensus 77 ~~~~~~~~~~~~~~~--~---~----------------------~~~~~~~--~~~P~l~i~g~~D~~~~~~~~~~~~~~ 127 (180)
++++..++....... . + +...+.+ +.+|+|+++|++|..+|++.+.++++.
T Consensus 90 ~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~ 169 (213)
T PF00326_consen 90 KAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNA 169 (213)
T ss_dssp SEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHH
T ss_pred eeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCCCCEEEEccCCCCccCHHHHHHHHHH
Confidence 998886643221000 0 0 1123445 789999999999999999999999888
Q ss_pred ccC---CcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHhhcC
Q 030264 128 MKS---LSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSLGE 179 (180)
Q Consensus 128 ~~~---~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 179 (180)
+.. +++++++|+++|.+... +........+.+||+++++.
T Consensus 170 L~~~g~~~~~~~~p~~gH~~~~~------------~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 170 LRKAGKPVELLIFPGEGHGFGNP------------ENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp HHHTTSSEEEEEETT-SSSTTSH------------HHHHHHHHHHHHHHHHHTT-
T ss_pred HHhcCCCEEEEEcCcCCCCCCCc------------hhHHHHHHHHHHHHHHHcCC
Confidence 753 38999999999986642 44568999999999999875
No 7
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.90 E-value=1.3e-22 Score=145.67 Aligned_cols=153 Identities=20% Similarity=0.178 Sum_probs=112.2
Q ss_pred cCCceEEEEEeccCCCCCCCCCCC-chHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEec
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPP-KAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLG 83 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~ 83 (180)
+.+||+|+++|+||+ |.+.... ...... ...+.+..+......++++++||||||.+++.++.++|.+++++++++
T Consensus 57 ~~~~~~vi~~D~~G~--G~S~~~~~~~~~~~-~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~ 133 (282)
T TIGR03343 57 VDAGYRVILKDSPGF--NKSDAVVMDEQRGL-VNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMG 133 (282)
T ss_pred HhCCCEEEEECCCCC--CCCCCCcCcccccc-hhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEEC
Confidence 356899999999999 4443321 111111 112233344444566799999999999999999999999999999876
Q ss_pred cCCCC------CC-----------------------------c----------cc-------------------------
Q 030264 84 YPLKG------MN-----------------------------G----------AV------------------------- 93 (180)
Q Consensus 84 ~~~~~------~~-----------------------------~----------~~------------------------- 93 (180)
++... .+ . .+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (282)
T TIGR03343 134 PGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTW 213 (282)
T ss_pred CCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccc
Confidence 42100 00 0 00
Q ss_pred -chhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHH
Q 030264 94 -RDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAF 172 (180)
Q Consensus 94 -~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~f 172 (180)
..+.++++++|+|+++|++|+.++++.+.++.+.++ ++++++++++||+.+. +.++.+.+.+.+|
T Consensus 214 ~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~-~~~~~~i~~agH~~~~-------------e~p~~~~~~i~~f 279 (282)
T TIGR03343 214 DVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMP-DAQLHVFSRCGHWAQW-------------EHADAFNRLVIDF 279 (282)
T ss_pred hHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCC-CCEEEEeCCCCcCCcc-------------cCHHHHHHHHHHH
Confidence 001245678999999999999999999999888876 6999999999999887 6689999999999
Q ss_pred HH
Q 030264 173 IS 174 (180)
Q Consensus 173 l~ 174 (180)
++
T Consensus 280 l~ 281 (282)
T TIGR03343 280 LR 281 (282)
T ss_pred hh
Confidence 86
No 8
>PLN02965 Probable pheophorbidase
Probab=99.90 E-value=3.6e-22 Score=141.56 Aligned_cols=151 Identities=15% Similarity=0.180 Sum_probs=112.2
Q ss_pred CCceEEEEEeccCCCCCCCCCC----CchHHHHHHHHHHHHHHHhhCCC-CcEEEEeeChhHHHHHHHhhccccccceEE
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAP----PKAEKLVEFHTDVVKGAVAKFPG-HPLILAGKSMGSRVSCMVACKEDIAASAVL 80 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~ 80 (180)
++||+|+++|+||+ |.+..+ ...+.+.+++.++++. +.. ++++++||||||.+++.++.++|.++++++
T Consensus 28 ~~~~~via~Dl~G~--G~S~~~~~~~~~~~~~a~dl~~~l~~----l~~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lv 101 (255)
T PLN02965 28 AAGFKSTCVDLTGA--GISLTDSNTVSSSDQYNRPLFALLSD----LPPDHKVILVGHSIGGGSVTEALCKFTDKISMAI 101 (255)
T ss_pred hCCceEEEecCCcC--CCCCCCccccCCHHHHHHHHHHHHHh----cCCCCCEEEEecCcchHHHHHHHHhCchheeEEE
Confidence 67999999999999 444322 2233334444444444 343 489999999999999999999999999999
Q ss_pred EeccCC--CC-------------------------C--Cc-------ccc-h----------------------------
Q 030264 81 CLGYPL--KG-------------------------M--NG-------AVR-D---------------------------- 95 (180)
Q Consensus 81 ~~~~~~--~~-------------------------~--~~-------~~~-~---------------------------- 95 (180)
+++... .+ . +. ... .
T Consensus 102 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (255)
T PLN02965 102 YVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQD 181 (255)
T ss_pred EEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhh
Confidence 876421 00 0 00 000 0
Q ss_pred -----hhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHH
Q 030264 96 -----ELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIA 170 (180)
Q Consensus 96 -----~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 170 (180)
..+..+++|+++++|++|..+|++..+.+.+.++ ++++++++++||+.+. +.++.+++.+.
T Consensus 182 ~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~-~a~~~~i~~~GH~~~~-------------e~p~~v~~~l~ 247 (255)
T PLN02965 182 LDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWP-PAQTYVLEDSDHSAFF-------------SVPTTLFQYLL 247 (255)
T ss_pred hhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCC-cceEEEecCCCCchhh-------------cCHHHHHHHHH
Confidence 0122588999999999999999999999988877 5889999999999888 77899999999
Q ss_pred HHHHHh
Q 030264 171 AFISKS 176 (180)
Q Consensus 171 ~fl~~~ 176 (180)
+|++..
T Consensus 248 ~~~~~~ 253 (255)
T PLN02965 248 QAVSSL 253 (255)
T ss_pred HHHHHh
Confidence 998754
No 9
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.89 E-value=2e-22 Score=145.60 Aligned_cols=155 Identities=20% Similarity=0.282 Sum_probs=111.1
Q ss_pred CCceEEEEEeccCCCCCCCCCCCc------hHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceE
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPPK------AEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAV 79 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~ 79 (180)
++.|+|+++|+||+ |.+..+.. .....+++.+.+..+......++++++||||||.+++.++.++|++++++
T Consensus 53 ~~~~~vi~~DlpG~--G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 130 (294)
T PLN02824 53 AKSHRVYAIDLLGY--GYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGV 130 (294)
T ss_pred HhCCeEEEEcCCCC--CCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEE
Confidence 34589999999999 44433210 01112333333333333345578999999999999999999999999999
Q ss_pred EEeccCCCCC-----C---c-----------------------------------------cc-----------------
Q 030264 80 LCLGYPLKGM-----N---G-----------------------------------------AV----------------- 93 (180)
Q Consensus 80 ~~~~~~~~~~-----~---~-----------------------------------------~~----------------- 93 (180)
++++.+.... . . ..
T Consensus 131 ili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (294)
T PLN02824 131 MLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGA 210 (294)
T ss_pred EEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchH
Confidence 9977422100 0 0 00
Q ss_pred ---------------chhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccch
Q 030264 94 ---------------RDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQ 158 (180)
Q Consensus 94 ---------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 158 (180)
..+.+.++++|+|+++|++|+.++.+..+.+.+. .+..++++++++||..+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~------------ 277 (294)
T PLN02824 211 VDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANF-DAVEDFIVLPGVGHCPQD------------ 277 (294)
T ss_pred HHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhc-CCccceEEeCCCCCChhh------------
Confidence 0012456789999999999999999888886554 445899999999999887
Q ss_pred hHHHHHHHHHHHHHHHHh
Q 030264 159 DEMEGLAVQAIAAFISKS 176 (180)
Q Consensus 159 ~~~~~~~~~~i~~fl~~~ 176 (180)
+.++.+.+.+.+|++++
T Consensus 278 -e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 278 -EAPELVNPLIESFVARH 294 (294)
T ss_pred -hCHHHHHHHHHHHHhcC
Confidence 77899999999999763
No 10
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.89 E-value=4e-22 Score=142.82 Aligned_cols=152 Identities=20% Similarity=0.267 Sum_probs=113.3
Q ss_pred ccCCceEEEEEeccCCCCCCCCCCC---chHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEE
Q 030264 4 KALDAVEVVTFDYPYIAGGKRKAPP---KAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVL 80 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~ 80 (180)
...++|+|+++|+||+ |.+..+. ..+.+.+++.+ +.+.+..++++++||||||.+++.+|.++|..+++++
T Consensus 47 ~L~~~~~vi~~Dl~G~--G~S~~~~~~~~~~~~~~~~~~----~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lv 120 (276)
T TIGR02240 47 ALDPDLEVIAFDVPGV--GGSSTPRHPYRFPGLAKLAAR----MLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLI 120 (276)
T ss_pred HhccCceEEEECCCCC--CCCCCCCCcCcHHHHHHHHHH----HHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheE
Confidence 3456899999999999 5543322 23333444444 4444455689999999999999999999999999999
Q ss_pred EeccCCCC--------------C------C-c-----------c--c-------------------------------ch
Q 030264 81 CLGYPLKG--------------M------N-G-----------A--V-------------------------------RD 95 (180)
Q Consensus 81 ~~~~~~~~--------------~------~-~-----------~--~-------------------------------~~ 95 (180)
+++.+... . . . . . ..
T Consensus 121 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (276)
T TIGR02240 121 LAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSI 200 (276)
T ss_pred EeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchh
Confidence 97743210 0 0 0 0 0 00
Q ss_pred hhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHH
Q 030264 96 ELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISK 175 (180)
Q Consensus 96 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 175 (180)
+.+.++++|+|+++|++|++++++..+++.+.++ +++++++++ ||..+. +.++++++.+.+|+++
T Consensus 201 ~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~-~~~~~~i~~-gH~~~~-------------e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 201 HWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIP-NAELHIIDD-GHLFLI-------------TRAEAVAPIIMKFLAE 265 (276)
T ss_pred hHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCC-CCEEEEEcC-CCchhh-------------ccHHHHHHHHHHHHHH
Confidence 1246788999999999999999999999988876 588889986 999877 6689999999999987
Q ss_pred h
Q 030264 176 S 176 (180)
Q Consensus 176 ~ 176 (180)
.
T Consensus 266 ~ 266 (276)
T TIGR02240 266 E 266 (276)
T ss_pred h
Confidence 5
No 11
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.89 E-value=2.6e-22 Score=141.57 Aligned_cols=154 Identities=14% Similarity=0.150 Sum_probs=110.1
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEecc
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 84 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~ 84 (180)
..+||+|+++|+||++ .+..........+++.+.+..+.+.....+++++||||||.+++.++.+++..++++++++.
T Consensus 36 l~~~~~vi~~D~~G~G--~S~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~ 113 (257)
T TIGR03611 36 LTQRFHVVTYDHRGTG--RSPGELPPGYSIAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLALRYPERLLSLVLINA 113 (257)
T ss_pred HHhccEEEEEcCCCCC--CCCCCCcccCCHHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHHHHChHHhHHheeecC
Confidence 4568999999999994 44322111111233333333333334556899999999999999999998888999987663
Q ss_pred CCCCC-------------------------------C-----c--------------cc-----------------chhh
Q 030264 85 PLKGM-------------------------------N-----G--------------AV-----------------RDEL 97 (180)
Q Consensus 85 ~~~~~-------------------------------~-----~--------------~~-----------------~~~~ 97 (180)
..... + . .. ....
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (257)
T TIGR03611 114 WSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSAR 193 (257)
T ss_pred CCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHH
Confidence 11100 0 0 00 0012
Q ss_pred hccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHH
Q 030264 98 LLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFIS 174 (180)
Q Consensus 98 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 174 (180)
+.++++|+++++|++|.++|++...++.+.++ +.++++++++||.+.. +.++++++.+.+||+
T Consensus 194 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~-------------~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 194 LDRIQHPVLLIANRDDMLVPYTQSLRLAAALP-NAQLKLLPYGGHASNV-------------TDPETFNRALLDFLK 256 (257)
T ss_pred hcccCccEEEEecCcCcccCHHHHHHHHHhcC-CceEEEECCCCCCccc-------------cCHHHHHHHHHHHhc
Confidence 45678999999999999999999999888876 5889999999999877 667899999999986
No 12
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.89 E-value=5.1e-22 Score=141.98 Aligned_cols=155 Identities=21% Similarity=0.246 Sum_probs=110.5
Q ss_pred ccCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEec
Q 030264 4 KALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLG 83 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~ 83 (180)
..+++|+|+++|+||+ |.+..+.......+++.+.+..+.+....++++++||||||.+++.++.+.+.+++++++++
T Consensus 50 ~l~~~~~vi~~D~~G~--G~S~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~ 127 (278)
T TIGR03056 50 PLARSFRVVAPDLPGH--GFTRAPFRFRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGIN 127 (278)
T ss_pred HHhhCcEEEeecCCCC--CCCCCccccCCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEc
Confidence 3456899999999999 54443322111223333333344444455689999999999999999999888888888765
Q ss_pred cCCCCCC-------------------------------ccc---------------------------------------
Q 030264 84 YPLKGMN-------------------------------GAV--------------------------------------- 93 (180)
Q Consensus 84 ~~~~~~~-------------------------------~~~--------------------------------------- 93 (180)
.+..... ...
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (278)
T TIGR03056 128 AALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQW 207 (278)
T ss_pred CcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcc
Confidence 3211000 000
Q ss_pred ----chhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHH
Q 030264 94 ----RDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAI 169 (180)
Q Consensus 94 ----~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i 169 (180)
....++++++|+++++|++|..+|.+..+.+.+.++ +++++.++++||.+.. +.++++++.+
T Consensus 208 ~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~-~~~~~~~~~~gH~~~~-------------e~p~~~~~~i 273 (278)
T TIGR03056 208 DLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVP-TATLHVVPGGGHLVHE-------------EQADGVVGLI 273 (278)
T ss_pred cccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhcc-CCeEEEECCCCCcccc-------------cCHHHHHHHH
Confidence 001234578999999999999999999988887765 5899999999999887 6679999999
Q ss_pred HHHHH
Q 030264 170 AAFIS 174 (180)
Q Consensus 170 ~~fl~ 174 (180)
.+|++
T Consensus 274 ~~f~~ 278 (278)
T TIGR03056 274 LQAAE 278 (278)
T ss_pred HHHhC
Confidence 99974
No 13
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.89 E-value=1.8e-21 Score=145.07 Aligned_cols=161 Identities=18% Similarity=0.196 Sum_probs=121.1
Q ss_pred cCCceEEEEEeccCCCCCCCCCC----CchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcc--ccccce
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAP----PKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE--DIAASA 78 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~~~~~~ 78 (180)
+++||+|+++|+||++ .+... ...+...+|+..+++.+....+..+++++||||||.+++.++... +..+.+
T Consensus 160 ~~~Gy~V~~~D~rGhG--~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~~p~~~~~v~g 237 (395)
T PLN02652 160 TSCGFGVYAMDWIGHG--GSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAASYPSIEDKLEG 237 (395)
T ss_pred HHCCCEEEEeCCCCCC--CCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHhccCcccccce
Confidence 4679999999999994 33322 345566788888899888776666899999999999999877541 247889
Q ss_pred EEEeccCCCCCC--------------------------c--c---------------------c--------------ch
Q 030264 79 VLCLGYPLKGMN--------------------------G--A---------------------V--------------RD 95 (180)
Q Consensus 79 ~~~~~~~~~~~~--------------------------~--~---------------------~--------------~~ 95 (180)
+++.++.+.... . . . ..
T Consensus 238 lVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~ 317 (395)
T PLN02652 238 IVLTSPALRVKPAHPIVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLT 317 (395)
T ss_pred EEEECcccccccchHHHHHHHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHH
Confidence 998764321000 0 0 0 00
Q ss_pred hhhccCCCcEEEEeecCCCCCChHHHHHHHHHccC-CcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHH
Q 030264 96 ELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKS-LSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFIS 174 (180)
Q Consensus 96 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 174 (180)
+.+.++++|+|+++|++|.++|++.++++++.... ..+++++++++|..... +.++++++.+.+||.
T Consensus 318 ~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e------------~~~e~v~~~I~~FL~ 385 (395)
T PLN02652 318 RNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFE------------PEREEVGRDIIDWME 385 (395)
T ss_pred hhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccC------------CCHHHHHHHHHHHHH
Confidence 12456789999999999999999999999988654 38899999999996552 246899999999999
Q ss_pred HhhcC
Q 030264 175 KSLGE 179 (180)
Q Consensus 175 ~~~~~ 179 (180)
++++.
T Consensus 386 ~~~~~ 390 (395)
T PLN02652 386 KRLDL 390 (395)
T ss_pred HHhhc
Confidence 88753
No 14
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.88 E-value=1.4e-21 Score=135.43 Aligned_cols=164 Identities=19% Similarity=0.189 Sum_probs=109.6
Q ss_pred ccCCceEEEEEeccCCCCC-CCCCC-Cch-----------HHHHHHHHHHHHHHHhhC--CCCcEEEEeeChhHHHHHHH
Q 030264 4 KALDAVEVVTFDYPYIAGG-KRKAP-PKA-----------EKLVEFHTDVVKGAVAKF--PGHPLILAGKSMGSRVSCMV 68 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g-~~~~~-~~~-----------~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~ 68 (180)
.+++||.|+++|+.+.. + ..... ... +....++...++++++.. ..++|+++|+|+||.+++.+
T Consensus 37 lA~~Gy~v~~pD~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~ 115 (218)
T PF01738_consen 37 LAEEGYVVLAPDLFGGR-GAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLL 115 (218)
T ss_dssp HHHTT-EEEEE-CCCCT-S--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHH
T ss_pred HHhcCCCEEecccccCC-CCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhh
Confidence 36789999999987632 2 11111 111 122345556677777754 34599999999999999999
Q ss_pred hhccccccceEEEeccCCCCCCcccchhhhccCCCcEEEEeecCCCCCChHHHHHHHHHc---cCCcEEEEEcCCCCccc
Q 030264 69 ACKEDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKM---KSLSELHLIDGGDHSFK 145 (180)
Q Consensus 69 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~H~~~ 145 (180)
+.+. +.+++++..- | ........+...++++|+++++|++|+.++.+....+.+.+ ...+++++|||++|+|.
T Consensus 116 a~~~-~~~~a~v~~y-g--~~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~ 191 (218)
T PF01738_consen 116 AARD-PRVDAAVSFY-G--GSPPPPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFA 191 (218)
T ss_dssp HCCT-TTSSEEEEES----SSSGGGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTT
T ss_pred hhhc-cccceEEEEc-C--CCCCCcchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCccccc
Confidence 9986 6788877643 2 11112234457889999999999999999999888888777 33489999999999999
Q ss_pred cccccccccccchhHHHHHHHHHHHHHHHHhh
Q 030264 146 IGKKHLQTMGTTQDEMEGLAVQAIAAFISKSL 177 (180)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 177 (180)
... ...++....++.|+.+.+||+++|
T Consensus 192 ~~~-----~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 192 NPS-----RPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp STT-----STT--HHHHHHHHHHHHHHHCC--
T ss_pred CCC-----CcccCHHHHHHHHHHHHHHHHhcC
Confidence 865 336788899999999999999875
No 15
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.88 E-value=1.9e-21 Score=137.58 Aligned_cols=151 Identities=12% Similarity=0.185 Sum_probs=111.8
Q ss_pred cCCceEEEEEeccCCCCCCCCCC--CchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEe
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAP--PKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCL 82 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~ 82 (180)
..++|.|+++|+||+ |.+... .......+++..+++. +..++++++||||||.+++.++.+++.++++++++
T Consensus 39 l~~~~~vi~~D~~G~--G~s~~~~~~~~~~~~~d~~~~l~~----l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli 112 (255)
T PRK10673 39 LVNDHDIIQVDMRNH--GLSPRDPVMNYPAMAQDLLDTLDA----LQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAI 112 (255)
T ss_pred HhhCCeEEEECCCCC--CCCCCCCCCCHHHHHHHHHHHHHH----cCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEE
Confidence 357899999999999 444332 2333444444444444 45568999999999999999999999999999987
Q ss_pred ccC-CCC-C------------------Cc----------c------------------c--c-------------hhhhc
Q 030264 83 GYP-LKG-M------------------NG----------A------------------V--R-------------DELLL 99 (180)
Q Consensus 83 ~~~-~~~-~------------------~~----------~------------------~--~-------------~~~~~ 99 (180)
+.+ ... . .. . . . .+.++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (255)
T PRK10673 113 DIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIP 192 (255)
T ss_pred ecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccC
Confidence 522 110 0 00 0 0 0 00134
Q ss_pred cCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHH
Q 030264 100 QITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISK 175 (180)
Q Consensus 100 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 175 (180)
.+++|+|+++|++|+.++.+..+.+.+.++ +.++.+++++||.+.. +.++++.+.+.+||.+
T Consensus 193 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~-------------~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 193 AWPHPALFIRGGNSPYVTEAYRDDLLAQFP-QARAHVIAGAGHWVHA-------------EKPDAVLRAIRRYLND 254 (255)
T ss_pred CCCCCeEEEECCCCCCCCHHHHHHHHHhCC-CcEEEEeCCCCCeeec-------------cCHHHHHHHHHHHHhc
Confidence 567899999999999999999988888776 5899999999999877 6678999999999975
No 16
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.88 E-value=2.2e-21 Score=140.72 Aligned_cols=155 Identities=13% Similarity=0.145 Sum_probs=109.3
Q ss_pred CCceEEEEEeccCCCCCCCCCCCc-hHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEecc
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPPK-AEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 84 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~ 84 (180)
++||+|+++|+||+ |.+..+.. .....++..+.+..+..+...++++++||||||.+++.++..+|..+.++++++.
T Consensus 71 ~~gy~vi~~Dl~G~--G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 148 (302)
T PRK00870 71 AAGHRVIAPDLIGF--GRSDKPTRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANT 148 (302)
T ss_pred hCCCEEEEECCCCC--CCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCC
Confidence 46999999999999 55443321 1111233333333333445666899999999999999999999999999998763
Q ss_pred CCC--CC----------------C-------------cc--------c-------------c------------------
Q 030264 85 PLK--GM----------------N-------------GA--------V-------------R------------------ 94 (180)
Q Consensus 85 ~~~--~~----------------~-------------~~--------~-------------~------------------ 94 (180)
... .. + .. + +
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (302)
T PRK00870 149 GLPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAAN 228 (302)
T ss_pred CCCCccccchHHHhhhhcccccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHH
Confidence 210 00 0 00 0 0
Q ss_pred ---hhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCC--cEEEEEcCCCCccccccccccccccchhHHHHHHHHHH
Q 030264 95 ---DELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSL--SELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAI 169 (180)
Q Consensus 95 ---~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i 169 (180)
...+.++++|+++++|++|+.++... .++.+.++.. .++.+++++||..+. +.++.+.+.+
T Consensus 229 ~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~-------------e~p~~~~~~l 294 (302)
T PRK00870 229 RAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQE-------------DSGEELAEAV 294 (302)
T ss_pred HHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchh-------------hChHHHHHHH
Confidence 01235678999999999999999766 7777776631 237899999999887 7789999999
Q ss_pred HHHHHHh
Q 030264 170 AAFISKS 176 (180)
Q Consensus 170 ~~fl~~~ 176 (180)
.+|++++
T Consensus 295 ~~fl~~~ 301 (302)
T PRK00870 295 LEFIRAT 301 (302)
T ss_pred HHHHhcC
Confidence 9999865
No 17
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.88 E-value=1e-20 Score=136.18 Aligned_cols=165 Identities=20% Similarity=0.261 Sum_probs=125.9
Q ss_pred ccCCceEEEEEeccCCCCC---CCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEE
Q 030264 4 KALDAVEVVTFDYPYIAGG---KRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVL 80 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~ 80 (180)
++.+||.|+++|+||++.. .......+....+|+...++.+....+..+++++||||||.+++.++.+++..+++++
T Consensus 57 l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~v 136 (298)
T COG2267 57 LAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLV 136 (298)
T ss_pred HHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEE
Confidence 3578999999999999522 2223345667778888888888776677899999999999999999999999999999
Q ss_pred EeccCCCCC-------------------------Cc----cc------ch------------------------------
Q 030264 81 CLGYPLKGM-------------------------NG----AV------RD------------------------------ 95 (180)
Q Consensus 81 ~~~~~~~~~-------------------------~~----~~------~~------------------------------ 95 (180)
+.++.+... .. .. ++
T Consensus 137 LssP~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~ 216 (298)
T COG2267 137 LSSPALGLGGAILRLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAG 216 (298)
T ss_pred EECccccCChhHHHHHHHHHhcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhh
Confidence 977422100 10 00 00
Q ss_pred -----hhhccCCCcEEEEeecCCCCCC-hHHHHHHHHHccCC-cEEEEEcCCCCccccccccccccccchhHHHHHHHHH
Q 030264 96 -----ELLLQITVPIMFVQGSKDGLCP-LDKLEAVRKKMKSL-SELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQA 168 (180)
Q Consensus 96 -----~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (180)
.....+++|+|+++|++|.+++ .+...++++.+... .++++++|+.|......+ ...+++++.
T Consensus 217 ~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~----------~~r~~~~~~ 286 (298)
T COG2267 217 RVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPD----------RAREEVLKD 286 (298)
T ss_pred cccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcc----------hHHHHHHHH
Confidence 0134567899999999999999 78888888887755 699999999999776442 222889999
Q ss_pred HHHHHHHhhc
Q 030264 169 IAAFISKSLG 178 (180)
Q Consensus 169 i~~fl~~~~~ 178 (180)
+.+|+.++..
T Consensus 287 ~~~~l~~~~~ 296 (298)
T COG2267 287 ILAWLAEALP 296 (298)
T ss_pred HHHHHHhhcc
Confidence 9999998764
No 18
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.87 E-value=2e-21 Score=139.86 Aligned_cols=153 Identities=19% Similarity=0.133 Sum_probs=111.1
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEecc
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 84 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~ 84 (180)
..++|+|+++|+||+ |.+..+.......++..+.+..+.+.++.++++++||||||.+++.++..+|.+++++++++.
T Consensus 57 l~~~~~vi~~D~~G~--G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~ 134 (286)
T PRK03204 57 LRDRFRCVAPDYLGF--GLSERPSGFGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNT 134 (286)
T ss_pred HhCCcEEEEECCCCC--CCCCCCCccccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECc
Confidence 456899999999999 544433222223455666666666666767899999999999999999999999999998653
Q ss_pred CCCCCC-----------------c-------------------ccch------------------------------hhh
Q 030264 85 PLKGMN-----------------G-------------------AVRD------------------------------ELL 98 (180)
Q Consensus 85 ~~~~~~-----------------~-------------------~~~~------------------------------~~~ 98 (180)
+..... . .... ..+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (286)
T PRK03204 135 WFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLL 214 (286)
T ss_pred cccCCCchhHHHHHHHhccccchhhhhhhhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHH
Confidence 221000 0 0000 000
Q ss_pred cc---------CCCcEEEEeecCCCCCChH-HHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHH
Q 030264 99 LQ---------ITVPIMFVQGSKDGLCPLD-KLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQA 168 (180)
Q Consensus 99 ~~---------~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (180)
.. +++|+++|+|++|..+++. ..+.+.+.++ +.++++++++||..+. +.++++++.
T Consensus 215 ~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip-~~~~~~i~~aGH~~~~-------------e~Pe~~~~~ 280 (286)
T PRK03204 215 ARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFP-DHVLVELPNAKHFIQE-------------DAPDRIAAA 280 (286)
T ss_pred HHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcC-CCeEEEcCCCcccccc-------------cCHHHHHHH
Confidence 11 1799999999999988665 4566777766 5899999999999988 778999999
Q ss_pred HHHHH
Q 030264 169 IAAFI 173 (180)
Q Consensus 169 i~~fl 173 (180)
+.+||
T Consensus 281 i~~~~ 285 (286)
T PRK03204 281 IIERF 285 (286)
T ss_pred HHHhc
Confidence 99997
No 19
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.87 E-value=1.5e-21 Score=136.86 Aligned_cols=153 Identities=18% Similarity=0.203 Sum_probs=109.5
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEecc
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 84 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~ 84 (180)
..+||+|+++|+||++ .+........ .+++.+.+..+....+.++++++|||+||.+++.++.++|..+++++++++
T Consensus 36 l~~~~~v~~~d~~G~G--~s~~~~~~~~-~~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~ 112 (251)
T TIGR02427 36 LTPDFRVLRYDKRGHG--LSDAPEGPYS-IEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNT 112 (251)
T ss_pred hhcccEEEEecCCCCC--CCCCCCCCCC-HHHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccC
Confidence 4579999999999994 4332221111 223333333333444556899999999999999999998888999887663
Q ss_pred CCC-CCC----------------------------------c-----cc-----------------------chhhhccC
Q 030264 85 PLK-GMN----------------------------------G-----AV-----------------------RDELLLQI 101 (180)
Q Consensus 85 ~~~-~~~----------------------------------~-----~~-----------------------~~~~~~~~ 101 (180)
+.. ... . .+ ..+.+.++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (251)
T TIGR02427 113 AAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAI 192 (251)
T ss_pred ccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhc
Confidence 211 000 0 00 00124567
Q ss_pred CCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHH
Q 030264 102 TVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFIS 174 (180)
Q Consensus 102 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 174 (180)
++|+++++|++|..+|.+..+.+.+.++ +.+++++++++|..+. +.++.+.+.+.+|++
T Consensus 193 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~-------------~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 193 AVPTLCIAGDQDGSTPPELVREIADLVP-GARFAEIRGAGHIPCV-------------EQPEAFNAALRDFLR 251 (251)
T ss_pred CCCeEEEEeccCCcCChHHHHHHHHhCC-CceEEEECCCCCcccc-------------cChHHHHHHHHHHhC
Confidence 8999999999999999998888888776 5899999999999877 557888999988873
No 20
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.87 E-value=3e-21 Score=143.03 Aligned_cols=156 Identities=19% Similarity=0.282 Sum_probs=106.6
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc-cccccceEEEec
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK-EDIAASAVLCLG 83 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-~~~~~~~~~~~~ 83 (180)
..++|+|+++|+||+ |.+..+.......+++.+.+..+......++++++||||||.+++.++.. +|.+++++++++
T Consensus 111 L~~~~~via~Dl~G~--G~S~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~ 188 (360)
T PLN02679 111 LAKNYTVYAIDLLGF--GASDKPPGFSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLN 188 (360)
T ss_pred HhcCCEEEEECCCCC--CCCCCCCCccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEEC
Confidence 356899999999999 54433321111122333333333333455689999999999999988874 688999999877
Q ss_pred cCCCCC--------------------------C-------------c--------------ccc----------------
Q 030264 84 YPLKGM--------------------------N-------------G--------------AVR---------------- 94 (180)
Q Consensus 84 ~~~~~~--------------------------~-------------~--------------~~~---------------- 94 (180)
++.... + . ...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (360)
T PLN02679 189 CAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGA 268 (360)
T ss_pred CccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCCh
Confidence 431100 0 0 000
Q ss_pred ----------------hhhhccCCCcEEEEeecCCCCCChHHH-----HHHHHHccCCcEEEEEcCCCCccccccccccc
Q 030264 95 ----------------DELLLQITVPIMFVQGSKDGLCPLDKL-----EAVRKKMKSLSELHLIDGGDHSFKIGKKHLQT 153 (180)
Q Consensus 95 ----------------~~~~~~~~~P~l~i~g~~D~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~ 153 (180)
.+.+.++++|+|+++|++|+.+|++.. .++.+.++ ++++++++++||..+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip-~~~l~~i~~aGH~~~~------- 340 (360)
T PLN02679 269 LDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLP-NVTLYVLEGVGHCPHD------- 340 (360)
T ss_pred HHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCC-ceEEEEcCCCCCCccc-------
Confidence 012446789999999999999988632 23333344 5899999999999887
Q ss_pred cccchhHHHHHHHHHHHHHHHHh
Q 030264 154 MGTTQDEMEGLAVQAIAAFISKS 176 (180)
Q Consensus 154 ~~~~~~~~~~~~~~~i~~fl~~~ 176 (180)
+.++++++.+.+|+++.
T Consensus 341 ------E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 341 ------DRPDLVHEKLLPWLAQL 357 (360)
T ss_pred ------cCHHHHHHHHHHHHHhc
Confidence 77899999999999863
No 21
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.87 E-value=3.8e-21 Score=138.99 Aligned_cols=154 Identities=12% Similarity=0.139 Sum_probs=108.7
Q ss_pred CceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEeccCC
Q 030264 7 DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 86 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~ 86 (180)
+.|+|+++|+||+ |.+..+...... ++..+.+..+.+....++++++||||||.+++.++.++|++++++++++.+.
T Consensus 52 ~~~~via~D~~G~--G~S~~~~~~~~~-~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 128 (295)
T PRK03592 52 GLGRCLAPDLIGM--GASDKPDIDYTF-ADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIV 128 (295)
T ss_pred hCCEEEEEcCCCC--CCCCCCCCCCCH-HHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCC
Confidence 3469999999999 544433221122 2322333333333455689999999999999999999999999999877421
Q ss_pred CC-----CC----------------c---------------c-----cc-------------------------------
Q 030264 87 KG-----MN----------------G---------------A-----VR------------------------------- 94 (180)
Q Consensus 87 ~~-----~~----------------~---------------~-----~~------------------------------- 94 (180)
.. .. . . ..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (295)
T PRK03592 129 RPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDG 208 (295)
T ss_pred CCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCC
Confidence 00 00 0 0 00
Q ss_pred ------------hhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHH
Q 030264 95 ------------DELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEME 162 (180)
Q Consensus 95 ------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~ 162 (180)
...+.++++|+|+++|++|..+++....++.....++.++++++++||..+. +.+
T Consensus 209 ~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-------------e~p 275 (295)
T PRK03592 209 EPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQE-------------DSP 275 (295)
T ss_pred cchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhh-------------cCH
Confidence 0012457899999999999999666665665554446899999999999887 678
Q ss_pred HHHHHHHHHHHHHh
Q 030264 163 GLAVQAIAAFISKS 176 (180)
Q Consensus 163 ~~~~~~i~~fl~~~ 176 (180)
+++++.+.+|+++.
T Consensus 276 ~~v~~~i~~fl~~~ 289 (295)
T PRK03592 276 EEIGAAIAAWLRRL 289 (295)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999875
No 22
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.87 E-value=1.4e-20 Score=119.48 Aligned_cols=168 Identities=28% Similarity=0.471 Sum_probs=137.5
Q ss_pred ccCCceEEEEEeccCCC---CCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEE
Q 030264 4 KALDAVEVVTFDYPYIA---GGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVL 80 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~ 80 (180)
.+.+|+.|..|++++.. .|.+.+++.-.+....+...+.++.......+.++-|+||||.++.+++......|++++
T Consensus 39 la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~ 118 (213)
T COG3571 39 LARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLV 118 (213)
T ss_pred HHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceeeccccccchHHHHHHHhhcCCcceEE
Confidence 36789999999999853 244445555556667777778888887777799999999999999999988666699999
Q ss_pred EeccCCC--CCCcccchhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccch
Q 030264 81 CLGYPLK--GMNGAVRDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQ 158 (180)
Q Consensus 81 ~~~~~~~--~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 158 (180)
|++||++ +.++..+.+.+..+++|+||.+|+.|++-..+.+..+ .+..+++++++.++.|.+..... .++...
T Consensus 119 clgYPfhppGKPe~~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y--~ls~~iev~wl~~adHDLkp~k~---vsgls~ 193 (213)
T COG3571 119 CLGYPFHPPGKPEQLRTEHLTGLKTPTLITQGTRDEFGTRDEVAGY--ALSDPIEVVWLEDADHDLKPRKL---VSGLST 193 (213)
T ss_pred EecCccCCCCCcccchhhhccCCCCCeEEeecccccccCHHHHHhh--hcCCceEEEEeccCccccccccc---cccccH
Confidence 9999997 4577889999999999999999999999988888443 45556999999999999776431 467777
Q ss_pred hHHHHHHHHHHHHHHHHh
Q 030264 159 DEMEGLAVQAIAAFISKS 176 (180)
Q Consensus 159 ~~~~~~~~~~i~~fl~~~ 176 (180)
.++......++..|..+.
T Consensus 194 ~~hL~~~A~~va~~~~~l 211 (213)
T COG3571 194 ADHLKTLAEQVAGWARRL 211 (213)
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 888888899999998754
No 23
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.87 E-value=3.2e-21 Score=131.81 Aligned_cols=151 Identities=22% Similarity=0.302 Sum_probs=121.2
Q ss_pred CceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhC-CCCcEEEEeeChhHHHHHHHhhccccccceEEEeccC
Q 030264 7 DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF-PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 85 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~ 85 (180)
-+++++.+||+|+ |.+.+.+......+|++.+.+++++.+ +.++|+++|+|+|...++.+|++.| ++++|+.+ |
T Consensus 87 ln~nv~~~DYSGy--G~S~G~psE~n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~S-P 161 (258)
T KOG1552|consen 87 LNCNVVSYDYSGY--GRSSGKPSERNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHS-P 161 (258)
T ss_pred ccceEEEEecccc--cccCCCcccccchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEec-c
Confidence 3799999999999 555555444577899999999999998 5779999999999999999999986 88999877 4
Q ss_pred CC-CCCc-------------ccchhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccc
Q 030264 86 LK-GMNG-------------AVRDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHL 151 (180)
Q Consensus 86 ~~-~~~~-------------~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~ 151 (180)
+. ++.- ....+.++.+++|+|++||++|.+++.....++++.++.+.+-.+..|+||.....
T Consensus 162 f~S~~rv~~~~~~~~~~~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~---- 237 (258)
T KOG1552|consen 162 FTSGMRVAFPDTKTTYCFDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIEL---- 237 (258)
T ss_pred chhhhhhhccCcceEEeeccccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCccccc----
Confidence 32 1111 11145677889999999999999999999999999998778999999999996542
Q ss_pred cccccchhHHHHHHHHHHHHHHHHh
Q 030264 152 QTMGTTQDEMEGLAVQAIAAFISKS 176 (180)
Q Consensus 152 ~~~~~~~~~~~~~~~~~i~~fl~~~ 176 (180)
..+....+..|+...
T Consensus 238 ----------~~~yi~~l~~f~~~~ 252 (258)
T KOG1552|consen 238 ----------YPEYIEHLRRFISSV 252 (258)
T ss_pred ----------CHHHHHHHHHHHHHh
Confidence 245667777776554
No 24
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.87 E-value=9.8e-21 Score=133.70 Aligned_cols=159 Identities=23% Similarity=0.275 Sum_probs=114.2
Q ss_pred cccCCceEEEEEeccCCCCCCCCCCCc-hHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEE
Q 030264 3 GKALDAVEVVTFDYPYIAGGKRKAPPK-AEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLC 81 (180)
Q Consensus 3 ~~a~~g~~v~~~d~~g~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~ 81 (180)
..+.+||+|+++|+||+ |.+..+.. .......+...+..+...+..++++++||+||+.+|+.+|..+|++++++++
T Consensus 66 ~la~~~~rviA~DlrGy--G~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~ 143 (322)
T KOG4178|consen 66 GLASRGYRVIAPDLRGY--GFSDAPPHISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVT 143 (322)
T ss_pred hhhhcceEEEecCCCCC--CCCCCCCCcceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEE
Confidence 45778999999999999 55444433 2222333333344444445677999999999999999999999999999999
Q ss_pred eccCCCCC--------------------------Ccc----------------------------------c--------
Q 030264 82 LGYPLKGM--------------------------NGA----------------------------------V-------- 93 (180)
Q Consensus 82 ~~~~~~~~--------------------------~~~----------------------------------~-------- 93 (180)
++.+...+ .+. +
T Consensus 144 ~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~ 223 (322)
T KOG4178|consen 144 LNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAF 223 (322)
T ss_pred ecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHH
Confidence 76432200 000 0
Q ss_pred ---------------------c-----hhhhccCCCcEEEEeecCCCCCChHHHHHHHH-HccCCcEEEEEcCCCCcccc
Q 030264 94 ---------------------R-----DELLLQITVPIMFVQGSKDGLCPLDKLEAVRK-KMKSLSELHLIDGGDHSFKI 146 (180)
Q Consensus 94 ---------------------~-----~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~~~H~~~~ 146 (180)
+ .-...++++|+++++|+.|.+.+.....+.++ ..+...+.++++|+||+...
T Consensus 224 ~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqq 303 (322)
T KOG4178|consen 224 YVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQ 303 (322)
T ss_pred HHhccccccccccchhhHHHhhCchhccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccc
Confidence 0 01245678999999999999988774444443 44444688999999999887
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHh
Q 030264 147 GKKHLQTMGTTQDEMEGLAVQAIAAFISKS 176 (180)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 176 (180)
+.++++++.+++|+++.
T Consensus 304 -------------e~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 304 -------------EKPQEVNQAILGFINSF 320 (322)
T ss_pred -------------cCHHHHHHHHHHHHHhh
Confidence 77899999999999875
No 25
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.86 E-value=9.3e-21 Score=126.35 Aligned_cols=153 Identities=17% Similarity=0.225 Sum_probs=121.1
Q ss_pred cCCceEEEEEeccCCCCCCCC---CCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEE
Q 030264 5 ALDAVEVVTFDYPYIAGGKRK---APPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLC 81 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~ 81 (180)
.++||+|++|.+||| |..+ -.....+..+++.+.++++.+. ..+.|.++|.||||.+++.+|.+.| +++++.
T Consensus 39 ~e~GyTv~aP~ypGH--G~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~v~GlSmGGv~alkla~~~p--~K~iv~ 113 (243)
T COG1647 39 NENGYTVYAPRYPGH--GTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIAVVGLSMGGVFALKLAYHYP--PKKIVP 113 (243)
T ss_pred HHCCceEecCCCCCC--CCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEEEEeecchhHHHHHHHhhCC--ccceee
Confidence 467999999999999 4432 2255667788889999999865 3347999999999999999999986 678887
Q ss_pred eccCCCCCCccc-----------------------------------------------chhhhccCCCcEEEEeecCCC
Q 030264 82 LGYPLKGMNGAV-----------------------------------------------RDELLLQITVPIMFVQGSKDG 114 (180)
Q Consensus 82 ~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~P~l~i~g~~D~ 114 (180)
++.|+....... -...+..|..|++++.|++|+
T Consensus 114 m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~ 193 (243)
T COG1647 114 MCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDE 193 (243)
T ss_pred ecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCC
Confidence 776655221100 002456788999999999999
Q ss_pred CCChHHHHHHHHHccCC-cEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHH
Q 030264 115 LCPLDKLEAVRKKMKSL-SELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFIS 174 (180)
Q Consensus 115 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 174 (180)
.+|.+.+..+++...+. .++.+|+++||.+..+ ...+++.+.+.+||+
T Consensus 194 mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D------------~Erd~v~e~V~~FL~ 242 (243)
T COG1647 194 MVPAESANFIYDHVESDDKELKWLEGSGHVITLD------------KERDQVEEDVITFLE 242 (243)
T ss_pred CCCHHHHHHHHHhccCCcceeEEEccCCceeecc------------hhHHHHHHHHHHHhh
Confidence 99999999999887655 8999999999998875 346788999999986
No 26
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.86 E-value=2.9e-20 Score=139.52 Aligned_cols=155 Identities=17% Similarity=0.161 Sum_probs=111.2
Q ss_pred ccCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhh--CCCCcEEEEeeChhHHHHHHHhhccccccceEEE
Q 030264 4 KALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK--FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLC 81 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~ 81 (180)
++.+||+|+++|+||+ |.+...............+++++... .+.++|+++||||||.+++.++..++.+++++|+
T Consensus 218 La~~Gy~vl~~D~pG~--G~s~~~~~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~ 295 (414)
T PRK05077 218 LAPRGIAMLTIDMPSV--GFSSKWKLTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVAC 295 (414)
T ss_pred HHhCCCEEEEECCCCC--CCCCCCCccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEE
Confidence 3578999999999998 44322211112222234556666553 2556999999999999999999988889999999
Q ss_pred eccCCCCC----------Cccc-------------c--------------h-hh-hccCCCcEEEEeecCCCCCChHHHH
Q 030264 82 LGYPLKGM----------NGAV-------------R--------------D-EL-LLQITVPIMFVQGSKDGLCPLDKLE 122 (180)
Q Consensus 82 ~~~~~~~~----------~~~~-------------~--------------~-~~-~~~~~~P~l~i~g~~D~~~~~~~~~ 122 (180)
++++.... +... . . .. ..++++|+|+++|++|+++|++.++
T Consensus 296 ~~~~~~~~~~~~~~~~~~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~ 375 (414)
T PRK05077 296 LGPVVHTLLTDPKRQQQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSR 375 (414)
T ss_pred ECCccchhhcchhhhhhchHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHH
Confidence 88554210 0000 0 0 01 1468899999999999999999999
Q ss_pred HHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHhh
Q 030264 123 AVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSL 177 (180)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 177 (180)
.+.+..+ +.+++++|++ |.+ +.+++++..+.+||++++
T Consensus 376 ~l~~~~~-~~~l~~i~~~-~~~---------------e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 376 LIASSSA-DGKLLEIPFK-PVY---------------RNFDKALQEISDWLEDRL 413 (414)
T ss_pred HHHHhCC-CCeEEEccCC-Ccc---------------CCHHHHHHHHHHHHHHHh
Confidence 8877664 5899999986 322 346899999999999876
No 27
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.86 E-value=1.6e-20 Score=131.28 Aligned_cols=148 Identities=20% Similarity=0.194 Sum_probs=107.4
Q ss_pred ccCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEec
Q 030264 4 KALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLG 83 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~ 83 (180)
...++|+|+++|+||++ .+..... . ++.++++.+.... .++++++||||||.+++.++.++|..+.++++++
T Consensus 26 ~l~~~~~vi~~d~~G~G--~s~~~~~-~----~~~~~~~~~~~~~-~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~ 97 (245)
T TIGR01738 26 ELSAHFTLHLVDLPGHG--RSRGFGP-L----SLADAAEAIAAQA-PDPAIWLGWSLGGLVALHIAATHPDRVRALVTVA 97 (245)
T ss_pred hhccCeEEEEecCCcCc--cCCCCCC-c----CHHHHHHHHHHhC-CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEec
Confidence 34568999999999994 4332211 1 1223333333332 2589999999999999999999998899999865
Q ss_pred cCCC-----CCC-c---------------cc-------------------------------------------------
Q 030264 84 YPLK-----GMN-G---------------AV------------------------------------------------- 93 (180)
Q Consensus 84 ~~~~-----~~~-~---------------~~------------------------------------------------- 93 (180)
+... ... . ..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (245)
T TIGR01738 98 SSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARALKQTLLARPTPNVQVLQAGLEILAT 177 (245)
T ss_pred CCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHHHHHHhhccCCCCHHHHHHHHHHhhc
Confidence 3210 000 0 00
Q ss_pred --chhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHH
Q 030264 94 --RDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAA 171 (180)
Q Consensus 94 --~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 171 (180)
....+.++++|+++++|++|..+|.+..+.+.+.++ ++++++++++||.... +.++++++.+.+
T Consensus 178 ~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~-------------e~p~~~~~~i~~ 243 (245)
T TIGR01738 178 VDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP-HSELYIFAKAAHAPFL-------------SHAEAFCALLVA 243 (245)
T ss_pred ccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC-CCeEEEeCCCCCCccc-------------cCHHHHHHHHHh
Confidence 001245788999999999999999998888887776 6999999999999887 668999999999
Q ss_pred HH
Q 030264 172 FI 173 (180)
Q Consensus 172 fl 173 (180)
|+
T Consensus 244 fi 245 (245)
T TIGR01738 244 FK 245 (245)
T ss_pred hC
Confidence 85
No 28
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.86 E-value=3.3e-20 Score=134.91 Aligned_cols=155 Identities=21% Similarity=0.281 Sum_probs=116.7
Q ss_pred ceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEE---Eecc
Q 030264 8 AVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVL---CLGY 84 (180)
Q Consensus 8 g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~---~~~~ 84 (180)
|+.|+++|++|++..+..+.....+ ..+....+.....++..+++.++|||+||.++..+|+.+|..++.++ ++++
T Consensus 86 ~~~v~aiDl~G~g~~s~~~~~~~y~-~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~ 164 (326)
T KOG1454|consen 86 GLRVLAIDLPGHGYSSPLPRGPLYT-LRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGP 164 (326)
T ss_pred ceEEEEEecCCCCcCCCCCCCCcee-hhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeeccccc
Confidence 7999999999984222222233223 34555555555555666789999999999999999999999999999 5443
Q ss_pred CCCCCCc-------------------------------------------------------------------------
Q 030264 85 PLKGMNG------------------------------------------------------------------------- 91 (180)
Q Consensus 85 ~~~~~~~------------------------------------------------------------------------- 91 (180)
+....+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (326)
T KOG1454|consen 165 PVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSL 244 (326)
T ss_pred ccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeE
Confidence 3211000
Q ss_pred --------ccchhhhccCC-CcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHH
Q 030264 92 --------AVRDELLLQIT-VPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEME 162 (180)
Q Consensus 92 --------~~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~ 162 (180)
......++++. +|+|+++|+.|+++|.+.+.++.+++ +++++++++++||..+. +.+
T Consensus 245 ~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~-pn~~~~~I~~~gH~~h~-------------e~P 310 (326)
T KOG1454|consen 245 FLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKL-PNAELVEIPGAGHLPHL-------------ERP 310 (326)
T ss_pred EEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhC-CCceEEEeCCCCccccc-------------CCH
Confidence 00112345565 99999999999999999999999988 57999999999999988 668
Q ss_pred HHHHHHHHHHHHHhh
Q 030264 163 GLAVQAIAAFISKSL 177 (180)
Q Consensus 163 ~~~~~~i~~fl~~~~ 177 (180)
+.+++.+..|+.++.
T Consensus 311 e~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 311 EEVAALLRSFIARLR 325 (326)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998753
No 29
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.86 E-value=3.8e-20 Score=140.09 Aligned_cols=154 Identities=16% Similarity=0.243 Sum_probs=111.5
Q ss_pred CCceEEEEEeccCCCCCCCCCC-CchHHHHHHHHHHH-HHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEec
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAP-PKAEKLVEFHTDVV-KGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLG 83 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~ 83 (180)
.++|+|+++|+||+ |.+..+ ...... ++..+.+ ..+......++++++||||||.+++.++.++|++++++++++
T Consensus 230 ~~~yrVia~Dl~G~--G~S~~p~~~~ytl-~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~ 306 (481)
T PLN03087 230 KSTYRLFAVDLLGF--GRSPKPADSLYTL-REHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLA 306 (481)
T ss_pred hCCCEEEEECCCCC--CCCcCCCCCcCCH-HHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEEC
Confidence 46999999999999 444333 221222 3333333 345555666799999999999999999999999999999987
Q ss_pred cCCCCCC--------------------c----------------c-----------c------------ch---------
Q 030264 84 YPLKGMN--------------------G----------------A-----------V------------RD--------- 95 (180)
Q Consensus 84 ~~~~~~~--------------------~----------------~-----------~------------~~--------- 95 (180)
++....+ . . + ..
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~ 386 (481)
T PLN03087 307 PPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCH 386 (481)
T ss_pred CCccccccchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhc
Confidence 4321000 0 0 0 00
Q ss_pred -------------------------hhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCcccccccc
Q 030264 96 -------------------------ELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKH 150 (180)
Q Consensus 96 -------------------------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~ 150 (180)
....++++|+|+++|++|..+|++..+.+.+.++ ++++++++++||..+..
T Consensus 387 ~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP-~a~l~vI~~aGH~~~v~--- 462 (481)
T PLN03087 387 THNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVP-RARVKVIDDKDHITIVV--- 462 (481)
T ss_pred cchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCC-CCEEEEeCCCCCcchhh---
Confidence 0001578999999999999999999999988886 59999999999995521
Q ss_pred ccccccchhHHHHHHHHHHHHHHHH
Q 030264 151 LQTMGTTQDEMEGLAVQAIAAFISK 175 (180)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~i~~fl~~ 175 (180)
+.++.+++.+.+|...
T Consensus 463 ---------e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 463 ---------GRQKEFARELEEIWRR 478 (481)
T ss_pred ---------cCHHHHHHHHHHHhhc
Confidence 4468999999998764
No 30
>PRK13604 luxD acyl transferase; Provisional
Probab=99.85 E-value=2.8e-20 Score=132.44 Aligned_cols=138 Identities=12% Similarity=0.085 Sum_probs=101.9
Q ss_pred cCCceEEEEEeccCCCCCCCCC---CCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEE
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKA---PPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLC 81 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~ 81 (180)
+++||+|+.||++|+. |.|.+ .........|+..++++++.. ...+|+++||||||.+++.+|... .++++|+
T Consensus 61 a~~G~~vLrfD~rg~~-GeS~G~~~~~t~s~g~~Dl~aaid~lk~~-~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~ 136 (307)
T PRK13604 61 SSNGFHVIRYDSLHHV-GLSSGTIDEFTMSIGKNSLLTVVDWLNTR-GINNLGLIAASLSARIAYEVINEI--DLSFLIT 136 (307)
T ss_pred HHCCCEEEEecCCCCC-CCCCCccccCcccccHHHHHHHHHHHHhc-CCCceEEEEECHHHHHHHHHhcCC--CCCEEEE
Confidence 5789999999998752 22222 122233468999999999886 456899999999999997777653 4888887
Q ss_pred eccCCC-------------------CCCcc------------c---------c-----hhhhccCCCcEEEEeecCCCCC
Q 030264 82 LGYPLK-------------------GMNGA------------V---------R-----DELLLQITVPIMFVQGSKDGLC 116 (180)
Q Consensus 82 ~~~~~~-------------------~~~~~------------~---------~-----~~~~~~~~~P~l~i~g~~D~~~ 116 (180)
.++... ..+.. + . .+.+++++.|+|++||++|.++
T Consensus 137 ~sp~~~l~d~l~~~~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lV 216 (307)
T PRK13604 137 AVGVVNLRDTLERALGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWV 216 (307)
T ss_pred cCCcccHHHHHHHhhhcccccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCcc
Confidence 663211 00000 0 0 0235567899999999999999
Q ss_pred ChHHHHHHHHHcc-CCcEEEEEcCCCCcccc
Q 030264 117 PLDKLEAVRKKMK-SLSELHLIDGGDHSFKI 146 (180)
Q Consensus 117 ~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~ 146 (180)
|++.+.++++.++ .+++++++||++|.+..
T Consensus 217 p~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 217 KQSEVIDLLDSIRSEQCKLYSLIGSSHDLGE 247 (307)
T ss_pred CHHHHHHHHHHhccCCcEEEEeCCCccccCc
Confidence 9999999999886 46999999999999885
No 31
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.85 E-value=2.7e-20 Score=131.98 Aligned_cols=148 Identities=17% Similarity=0.166 Sum_probs=107.4
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEecc
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 84 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~ 84 (180)
..+.|+|+++|+||+ |.+..... ... +++ ++.+.. ...+++.++||||||.+++.+|.++|.++++++++++
T Consensus 36 L~~~~~vi~~Dl~G~--G~S~~~~~-~~~-~~~---~~~l~~-~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~ 107 (256)
T PRK10349 36 LSSHFTLHLVDLPGF--GRSRGFGA-LSL-ADM---AEAVLQ-QAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVAS 107 (256)
T ss_pred HhcCCEEEEecCCCC--CCCCCCCC-CCH-HHH---HHHHHh-cCCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecC
Confidence 346799999999999 44433221 122 222 222222 2346899999999999999999999999999998763
Q ss_pred CCC--CC---Cc---------------cc---------------------------------------------------
Q 030264 85 PLK--GM---NG---------------AV--------------------------------------------------- 93 (180)
Q Consensus 85 ~~~--~~---~~---------------~~--------------------------------------------------- 93 (180)
+.. .. .. ..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (256)
T PRK10349 108 SPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVD 187 (256)
T ss_pred ccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCc
Confidence 210 00 00 00
Q ss_pred chhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHH
Q 030264 94 RDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFI 173 (180)
Q Consensus 94 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl 173 (180)
..+.+.++++|+|+++|++|.++|.+....+.+.++ ++++.+++++||+.+. +.++.+++.+.+|-
T Consensus 188 ~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~-~~~~~~i~~~gH~~~~-------------e~p~~f~~~l~~~~ 253 (256)
T PRK10349 188 LRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP-HSESYIFAKAAHAPFI-------------SHPAEFCHLLVALK 253 (256)
T ss_pred cHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCC-CCeEEEeCCCCCCccc-------------cCHHHHHHHHHHHh
Confidence 001345678999999999999999988887777765 6999999999999888 77899999998885
Q ss_pred H
Q 030264 174 S 174 (180)
Q Consensus 174 ~ 174 (180)
+
T Consensus 254 ~ 254 (256)
T PRK10349 254 Q 254 (256)
T ss_pred c
Confidence 4
No 32
>PRK10566 esterase; Provisional
Probab=99.85 E-value=3e-20 Score=131.23 Aligned_cols=154 Identities=16% Similarity=0.166 Sum_probs=104.2
Q ss_pred cCCceEEEEEeccCCCCCCCCC---CCch-------HHHHHHHHHHHHHHHhh--CCCCcEEEEeeChhHHHHHHHhhcc
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKA---PPKA-------EKLVEFHTDVVKGAVAK--FPGHPLILAGKSMGSRVSCMVACKE 72 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~---~~~~-------~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~ 72 (180)
+.+||+|+++|+||++ .+.. .... ....+++..+++++... .+.++|+++|||+||.+++.++.+.
T Consensus 51 ~~~G~~v~~~d~~g~G--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~ 128 (249)
T PRK10566 51 AQAGFRVIMPDAPMHG--ARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARH 128 (249)
T ss_pred HhCCCEEEEecCCccc--ccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhC
Confidence 4679999999999984 3211 1111 12245566666776654 3456899999999999999999887
Q ss_pred ccccceEEEeccCC---------CCCCc-----------------cc-chhhhccC-CCcEEEEeecCCCCCChHHHHHH
Q 030264 73 DIAASAVLCLGYPL---------KGMNG-----------------AV-RDELLLQI-TVPIMFVQGSKDGLCPLDKLEAV 124 (180)
Q Consensus 73 ~~~~~~~~~~~~~~---------~~~~~-----------------~~-~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~ 124 (180)
+.....+++.+... ..... .+ ....+.++ ++|+|+++|++|..+|++.+.++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l 208 (249)
T PRK10566 129 PWVKCVASLMGSGYFTSLARTLFPPLIPETAAQQAEFNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRL 208 (249)
T ss_pred CCeeEEEEeeCcHHHHHHHHHhcccccccccccHHHHHHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHH
Confidence 65333343332211 00000 00 01224455 68999999999999999999999
Q ss_pred HHHccCC-----cEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHhh
Q 030264 125 RKKMKSL-----SELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSL 177 (180)
Q Consensus 125 ~~~~~~~-----~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 177 (180)
.+.++.. +++.++++++|.+.. .....+.+||++++
T Consensus 209 ~~~l~~~g~~~~~~~~~~~~~~H~~~~-----------------~~~~~~~~fl~~~~ 249 (249)
T PRK10566 209 QQALRERGLDKNLTCLWEPGVRHRITP-----------------EALDAGVAFFRQHL 249 (249)
T ss_pred HHHHHhcCCCcceEEEecCCCCCccCH-----------------HHHHHHHHHHHhhC
Confidence 8877542 577889999998752 36788999998764
No 33
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.85 E-value=7.5e-21 Score=131.35 Aligned_cols=137 Identities=23% Similarity=0.376 Sum_probs=100.5
Q ss_pred CCceEEEEEeccCCCCCCCCCCCc--hHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEec
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPPK--AEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLG 83 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~ 83 (180)
++||+|+++|+||+ |.+..... .... ++..+.+..+.+....++++++|||+||.+++.++.++|..++++++++
T Consensus 22 ~~~~~v~~~d~~G~--G~s~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~ 98 (228)
T PF12697_consen 22 ARGYRVIAFDLPGH--GRSDPPPDYSPYSI-EDYAEDLAELLDALGIKKVILVGHSMGGMIALRLAARYPDRVKGLVLLS 98 (228)
T ss_dssp HTTSEEEEEECTTS--TTSSSHSSGSGGSH-HHHHHHHHHHHHHTTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEES
T ss_pred hCCCEEEEEecCCc--cccccccccCCcch-hhhhhhhhhcccccccccccccccccccccccccccccccccccceeec
Confidence 47999999999999 54443321 1222 2222333333333454689999999999999999999999999999988
Q ss_pred cCCCCCC--------ccc---------------------------------------------------chhhhccCCCc
Q 030264 84 YPLKGMN--------GAV---------------------------------------------------RDELLLQITVP 104 (180)
Q Consensus 84 ~~~~~~~--------~~~---------------------------------------------------~~~~~~~~~~P 104 (180)
++..... ... ....++.+++|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 178 (228)
T PF12697_consen 99 PPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSSRRALAEYLRSNLWQADLSEALPRIKVP 178 (228)
T ss_dssp ESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGSSSE
T ss_pred ccccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccCCC
Confidence 6553100 000 00234567899
Q ss_pred EEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCcccc
Q 030264 105 IMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKI 146 (180)
Q Consensus 105 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 146 (180)
+++++|++|..++.+..+.+.+.++ ++++++++++||.+..
T Consensus 179 vl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~ 219 (228)
T PF12697_consen 179 VLVIHGEDDPIVPPESAEELADKLP-NAELVVIPGAGHFLFL 219 (228)
T ss_dssp EEEEEETTSSSSHHHHHHHHHHHST-TEEEEEETTSSSTHHH
T ss_pred eEEeecCCCCCCCHHHHHHHHHHCC-CCEEEEECCCCCccHH
Confidence 9999999999999888888888776 6999999999999877
No 34
>PRK06489 hypothetical protein; Provisional
Probab=99.85 E-value=9.4e-20 Score=135.14 Aligned_cols=156 Identities=17% Similarity=0.115 Sum_probs=109.9
Q ss_pred CCceEEEEEeccCCCCCCCCCCCch------HHHHHHHH-HHHHHHHhhCCCCcEE-EEeeChhHHHHHHHhhccccccc
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPPKA------EKLVEFHT-DVVKGAVAKFPGHPLI-LAGKSMGSRVSCMVACKEDIAAS 77 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~~~~~~ 77 (180)
.++|+|+++|+||+ |.+..+... ....+++. +++..+....+.+++. ++||||||.+++.++.++|.+++
T Consensus 103 ~~~~~Via~Dl~Gh--G~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~ 180 (360)
T PRK06489 103 ASKYFIILPDGIGH--GKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMD 180 (360)
T ss_pred ccCCEEEEeCCCCC--CCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhh
Confidence 57899999999999 444332210 11123333 3334344555656775 89999999999999999999999
Q ss_pred eEEEeccCC-CC------------------------C-Cc---c----------------------cc------------
Q 030264 78 AVLCLGYPL-KG------------------------M-NG---A----------------------VR------------ 94 (180)
Q Consensus 78 ~~~~~~~~~-~~------------------------~-~~---~----------------------~~------------ 94 (180)
++|++++.. .. . .. . ..
T Consensus 181 ~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (360)
T PRK06489 181 ALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDER 260 (360)
T ss_pred eeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHH
Confidence 999876321 00 0 00 0 00
Q ss_pred ------------------------hhhhccCCCcEEEEeecCCCCCChHHH--HHHHHHccCCcEEEEEcCC----CCcc
Q 030264 95 ------------------------DELLLQITVPIMFVQGSKDGLCPLDKL--EAVRKKMKSLSELHLIDGG----DHSF 144 (180)
Q Consensus 95 ------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~----~H~~ 144 (180)
.+.+.++++|+|+++|++|..+|++.. +.+.+.++ +.++++++++ ||..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip-~a~l~~i~~a~~~~GH~~ 339 (360)
T PRK06489 261 LAAPVTADANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVK-HGRLVLIPASPETRGHGT 339 (360)
T ss_pred HHhhhhcCHHHHHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCc-CCeEEEECCCCCCCCccc
Confidence 012456889999999999999998865 66777766 5899999986 9987
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHHHHhhc
Q 030264 145 KIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSLG 178 (180)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 178 (180)
+ +.++.+++.+.+|+++..+
T Consensus 340 ~--------------e~P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 340 T--------------GSAKFWKAYLAEFLAQVPK 359 (360)
T ss_pred c--------------cCHHHHHHHHHHHHHhccc
Confidence 5 4478999999999987643
No 35
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.85 E-value=6.1e-20 Score=128.52 Aligned_cols=152 Identities=18% Similarity=0.250 Sum_probs=106.7
Q ss_pred CCceEEEEEeccCCCCCCCCCCC--chHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEec
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPP--KAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLG 83 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~ 83 (180)
++||.|+++|+||+ |.+..+. ......+.+.+.+..+.+..+.++++++|||+||.+++.++.++|..+.++++++
T Consensus 25 ~~~~~v~~~d~~g~--G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~ 102 (251)
T TIGR03695 25 GPHFRCLAIDLPGH--GSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSMGGRIALYYALQYPERVQGLILES 102 (251)
T ss_pred cccCeEEEEcCCCC--CCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEeccHHHHHHHHHHhCchheeeeEEec
Confidence 37999999999999 4443322 2223333333336666666677799999999999999999999988899998866
Q ss_pred cCCCCCC-----------------------c-------------c---cc------------------------------
Q 030264 84 YPLKGMN-----------------------G-------------A---VR------------------------------ 94 (180)
Q Consensus 84 ~~~~~~~-----------------------~-------------~---~~------------------------------ 94 (180)
....... . . ..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (251)
T TIGR03695 103 GSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGK 182 (251)
T ss_pred CCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhHHHHHhcccccchHHHHHHHHhhhhc
Confidence 3211000 0 0 00
Q ss_pred ----hhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHH
Q 030264 95 ----DELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIA 170 (180)
Q Consensus 95 ----~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 170 (180)
.+.+.++++|+++++|++|..++ +..+.+.+..+ ++++++++++||.+.. +.++.+.+.+.
T Consensus 183 ~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~-~~~~~~~~~~gH~~~~-------------e~~~~~~~~i~ 247 (251)
T TIGR03695 183 QPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLP-NLTLVIIANAGHNIHL-------------ENPEAFAKILL 247 (251)
T ss_pred ccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCC-CCcEEEEcCCCCCcCc-------------cChHHHHHHHH
Confidence 01245678999999999998764 44555555444 5899999999999877 55788999999
Q ss_pred HHHH
Q 030264 171 AFIS 174 (180)
Q Consensus 171 ~fl~ 174 (180)
+|++
T Consensus 248 ~~l~ 251 (251)
T TIGR03695 248 AFLE 251 (251)
T ss_pred HHhC
Confidence 9873
No 36
>PLN02578 hydrolase
Probab=99.85 E-value=9.5e-20 Score=134.81 Aligned_cols=149 Identities=19% Similarity=0.192 Sum_probs=108.7
Q ss_pred cCCceEEEEEeccCCCCCCCCCCC---chHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEE
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPP---KAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLC 81 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~ 81 (180)
..++|+|+++|+||+ |.+..+. ......+++.+.++.+ ..++++++|||+||.+++.+|.++|..++++++
T Consensus 109 l~~~~~v~~~D~~G~--G~S~~~~~~~~~~~~a~~l~~~i~~~----~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvL 182 (354)
T PLN02578 109 LAKKYKVYALDLLGF--GWSDKALIEYDAMVWRDQVADFVKEV----VKEPAVLVGNSLGGFTALSTAVGYPELVAGVAL 182 (354)
T ss_pred HhcCCEEEEECCCCC--CCCCCcccccCHHHHHHHHHHHHHHh----ccCCeEEEEECHHHHHHHHHHHhChHhcceEEE
Confidence 346799999999999 4443332 2222233444433333 346899999999999999999999999999998
Q ss_pred eccCCC-C-C----C-------cc--------------------------------------c-----------------
Q 030264 82 LGYPLK-G-M----N-------GA--------------------------------------V----------------- 93 (180)
Q Consensus 82 ~~~~~~-~-~----~-------~~--------------------------------------~----------------- 93 (180)
++++.. . . . .. +
T Consensus 183 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (354)
T PLN02578 183 LNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEP 262 (354)
T ss_pred ECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhc
Confidence 763210 0 0 0 00 0
Q ss_pred -------------------------chhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCcccccc
Q 030264 94 -------------------------RDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGK 148 (180)
Q Consensus 94 -------------------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~ 148 (180)
..+.++++++|+++++|++|++++.+.+.++.+.++ +.+++++ ++||..+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p-~a~l~~i-~~GH~~~~-- 338 (354)
T PLN02578 263 AADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYP-DTTLVNL-QAGHCPHD-- 338 (354)
T ss_pred ccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-CCEEEEe-CCCCCccc--
Confidence 001235678999999999999999999999888876 5788888 58999887
Q ss_pred ccccccccchhHHHHHHHHHHHHHHH
Q 030264 149 KHLQTMGTTQDEMEGLAVQAIAAFIS 174 (180)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~i~~fl~ 174 (180)
+.++++++.+.+|++
T Consensus 339 -----------e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 339 -----------EVPEQVNKALLEWLS 353 (354)
T ss_pred -----------cCHHHHHHHHHHHHh
Confidence 778999999999985
No 37
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.84 E-value=8.3e-20 Score=130.66 Aligned_cols=151 Identities=18% Similarity=0.233 Sum_probs=106.9
Q ss_pred CceEEEEEeccCCCCCCCCCCCchH--HHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEecc
Q 030264 7 DAVEVVTFDYPYIAGGKRKAPPKAE--KLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 84 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~ 84 (180)
.||+|+++|+||+ |.+..+.... ...+++.+.+..+......++++++||||||.+++.++..+|..+.++++.+.
T Consensus 52 ~g~~vi~~d~~G~--G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (288)
T TIGR01250 52 EGREVIMYDQLGC--GYSDQPDDSDELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSM 129 (288)
T ss_pred cCCEEEEEcCCCC--CCCCCCCcccccccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecc
Confidence 4899999999999 4443321111 11233444444444555566899999999999999999999989999998653
Q ss_pred CCCC-------------CCc-------------c-------------c--------------------------------
Q 030264 85 PLKG-------------MNG-------------A-------------V-------------------------------- 93 (180)
Q Consensus 85 ~~~~-------------~~~-------------~-------------~-------------------------------- 93 (180)
.... ... . .
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (288)
T TIGR01250 130 LDSAPEYVKELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGP 209 (288)
T ss_pred cccchHHHHHHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCC
Confidence 1100 000 0 0
Q ss_pred -------------chhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhH
Q 030264 94 -------------RDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDE 160 (180)
Q Consensus 94 -------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~ 160 (180)
..+.+.++++|+++++|+.|.. ++.....+.+.++ ++++++++++||..+. +
T Consensus 210 ~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~-------------e 274 (288)
T TIGR01250 210 NEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIA-GSRLVVFPDGSHMTMI-------------E 274 (288)
T ss_pred ccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhcc-CCeEEEeCCCCCCccc-------------C
Confidence 0012356789999999999984 6677777777765 5889999999999887 5
Q ss_pred HHHHHHHHHHHHHH
Q 030264 161 MEGLAVQAIAAFIS 174 (180)
Q Consensus 161 ~~~~~~~~i~~fl~ 174 (180)
.++++.+.+.+|++
T Consensus 275 ~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 275 DPEVYFKLLSDFIR 288 (288)
T ss_pred CHHHHHHHHHHHhC
Confidence 67999999999974
No 38
>PRK07581 hypothetical protein; Validated
Probab=99.84 E-value=1.3e-19 Score=133.42 Aligned_cols=157 Identities=16% Similarity=0.061 Sum_probs=114.4
Q ss_pred CCceEEEEEeccCCCCCCCCCCCc------hH-----HHHHHHHHHHHHHHhhCCCCc-EEEEeeChhHHHHHHHhhccc
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPPK------AE-----KLVEFHTDVVKGAVAKFPGHP-LILAGKSMGSRVSCMVACKED 73 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~~------~~-----~~~~~~~~~~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~~ 73 (180)
.++|+|+++|+||++ .+..+.. .+ ...+++......+...+..++ .+++||||||.+++.+|.++|
T Consensus 69 ~~~~~vi~~D~~G~G--~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P 146 (339)
T PRK07581 69 PEKYFIIIPNMFGNG--LSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYP 146 (339)
T ss_pred cCceEEEEecCCCCC--CCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCH
Confidence 468999999999994 4332211 11 134555554444555567778 479999999999999999999
Q ss_pred cccceEEEeccCCCC-----------------------------------------------------C----------C
Q 030264 74 IAASAVLCLGYPLKG-----------------------------------------------------M----------N 90 (180)
Q Consensus 74 ~~~~~~~~~~~~~~~-----------------------------------------------------~----------~ 90 (180)
++++++++++..... . .
T Consensus 147 ~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (339)
T PRK07581 147 DMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLE 226 (339)
T ss_pred HHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHH
Confidence 999999987421100 0 0
Q ss_pred cc-------c------------------------------chhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcE
Q 030264 91 GA-------V------------------------------RDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSE 133 (180)
Q Consensus 91 ~~-------~------------------------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 133 (180)
.. . ..+.++++++|+|+++|++|..+|++....+.+.++ +++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip-~a~ 305 (339)
T PRK07581 227 DFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIP-NAE 305 (339)
T ss_pred HHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-CCe
Confidence 00 0 001234578999999999999999999998888776 589
Q ss_pred EEEEcC-CCCccccccccccccccchhHHHHHHHHHHHHHHHHhhc
Q 030264 134 LHLIDG-GDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSLG 178 (180)
Q Consensus 134 ~~~~~~-~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 178 (180)
++++++ +||.... +.++.+...+.+|+++.+.
T Consensus 306 l~~i~~~~GH~~~~-------------~~~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 306 LRPIESIWGHLAGF-------------GQNPADIAFIDAALKELLA 338 (339)
T ss_pred EEEeCCCCCccccc-------------cCcHHHHHHHHHHHHHHHh
Confidence 999998 8999777 5568899999999988763
No 39
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.84 E-value=6.9e-20 Score=135.05 Aligned_cols=153 Identities=12% Similarity=0.111 Sum_probs=111.3
Q ss_pred CCceEEEEEeccCCCCCCCCC-CCchHHHHHHHHHHHHHHHhhCCCCc-EEEEeeChhHHHHHHHhhccccccceEEEec
Q 030264 6 LDAVEVVTFDYPYIAGGKRKA-PPKAEKLVEFHTDVVKGAVAKFPGHP-LILAGKSMGSRVSCMVACKEDIAASAVLCLG 83 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~ 83 (180)
.++|+|+++|+||++ .+.. ........+++.. +...+..++ ++++||||||.+++.++.++|.++.++++++
T Consensus 97 ~~~~~Vi~~Dl~G~g--~s~~~~~~~~~~a~dl~~----ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~ 170 (343)
T PRK08775 97 PARFRLLAFDFIGAD--GSLDVPIDTADQADAIAL----LLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVS 170 (343)
T ss_pred ccccEEEEEeCCCCC--CCCCCCCCHHHHHHHHHH----HHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEEC
Confidence 468999999999984 3322 1222333333333 333345445 5799999999999999999999999999876
Q ss_pred cCCCCC----------------------C--------------------------ccc-----------c----------
Q 030264 84 YPLKGM----------------------N--------------------------GAV-----------R---------- 94 (180)
Q Consensus 84 ~~~~~~----------------------~--------------------------~~~-----------~---------- 94 (180)
...... . ... .
T Consensus 171 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 250 (343)
T PRK08775 171 GAHRAHPYAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQY 250 (343)
T ss_pred ccccCCHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHH
Confidence 321000 0 000 0
Q ss_pred -------------------hhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcC-CCCcccccccccccc
Q 030264 95 -------------------DELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDG-GDHSFKIGKKHLQTM 154 (180)
Q Consensus 95 -------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~~H~~~~~~~~~~~~ 154 (180)
...+.++++|+|+++|++|.++|++...++.+.+.++.+++++++ +||..+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~l-------- 322 (343)
T PRK08775 251 VARTPVNAYLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFL-------- 322 (343)
T ss_pred HHhcChhHHHHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHh--------
Confidence 001346789999999999999999999999888855699999985 9999888
Q ss_pred ccchhHHHHHHHHHHHHHHHHhh
Q 030264 155 GTTQDEMEGLAVQAIAAFISKSL 177 (180)
Q Consensus 155 ~~~~~~~~~~~~~~i~~fl~~~~ 177 (180)
+.+++++..+.+||++.-
T Consensus 323 -----E~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 323 -----KETDRIDAILTTALRSTG 340 (343)
T ss_pred -----cCHHHHHHHHHHHHHhcc
Confidence 678999999999998653
No 40
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.84 E-value=4.3e-20 Score=120.04 Aligned_cols=123 Identities=28% Similarity=0.403 Sum_probs=97.4
Q ss_pred ccCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHh-hCCCCcEEEEeeChhHHHHHHHhhccccccceEEEe
Q 030264 4 KALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVA-KFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCL 82 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~ 82 (180)
++++||.|+.+|+|+. +.+ ....++.++++.+.. ..+.++++++|||+||.+++.++.+. +++++++++
T Consensus 22 l~~~G~~v~~~~~~~~--~~~-------~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~ 91 (145)
T PF12695_consen 22 LAEQGYAVVAFDYPGH--GDS-------DGADAVERVLADIRAGYPDPDRIILIGHSMGGAIAANLAARN-PRVKAVVLL 91 (145)
T ss_dssp HHHTTEEEEEESCTTS--TTS-------HHSHHHHHHHHHHHHHHCTCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEE
T ss_pred HHHCCCEEEEEecCCC--Ccc-------chhHHHHHHHHHHHhhcCCCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEe
Confidence 3567999999999998 332 111355555555423 23567999999999999999999987 789999998
Q ss_pred ccCCCCCCcccchhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCc
Q 030264 83 GYPLKGMNGAVRDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHS 143 (180)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 143 (180)
+++ ...+.+...+.|+++++|++|+.++++...+++++++.+.++++++|++|+
T Consensus 92 ~~~-------~~~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 92 SPY-------PDSEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp SES-------SGCHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred cCc-------cchhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 852 125567788899999999999999999999999999877999999999995
No 41
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.84 E-value=2e-19 Score=126.36 Aligned_cols=145 Identities=18% Similarity=0.242 Sum_probs=100.2
Q ss_pred CceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccc-cceEEEeccC
Q 030264 7 DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIA-ASAVLCLGYP 85 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~-~~~~~~~~~~ 85 (180)
++|+|+++|+||+ |.+..+.. ... ++..+.+..+......++++++||||||.+++.++.++++. ++++++.+.+
T Consensus 26 ~~~~vi~~D~~G~--G~S~~~~~-~~~-~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 26 PDYPRLYIDLPGH--GGSAAISV-DGF-ADVSRLLSQTLQSYNILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred CCCCEEEecCCCC--CCCCCccc-cCH-HHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCC
Confidence 4799999999999 44433321 122 33333333333344667999999999999999999997654 9999886633
Q ss_pred CCCCC----------------------------------------cc--------c----------------------ch
Q 030264 86 LKGMN----------------------------------------GA--------V----------------------RD 95 (180)
Q Consensus 86 ~~~~~----------------------------------------~~--------~----------------------~~ 95 (180)
..... .. . ..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (242)
T PRK11126 102 PGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLR 181 (242)
T ss_pred CCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHH
Confidence 21000 00 0 00
Q ss_pred hhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHH
Q 030264 96 ELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISK 175 (180)
Q Consensus 96 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 175 (180)
+.+.++++|+++++|++|+.+. .+.+.. ++++++++++||.++. +.++++++.+.+|+++
T Consensus 182 ~~l~~i~~P~lii~G~~D~~~~-----~~~~~~--~~~~~~i~~~gH~~~~-------------e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 182 PALQALTFPFYYLCGERDSKFQ-----ALAQQL--ALPLHVIPNAGHNAHR-------------ENPAAFAASLAQILRL 241 (242)
T ss_pred HHhhccCCCeEEEEeCCcchHH-----HHHHHh--cCeEEEeCCCCCchhh-------------hChHHHHHHHHHHHhh
Confidence 1345678999999999998542 223332 5899999999999888 7789999999999975
No 42
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.84 E-value=2.9e-19 Score=133.94 Aligned_cols=158 Identities=20% Similarity=0.173 Sum_probs=109.7
Q ss_pred CCceEEEEEeccCCCCCCCCCCC----chHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEE
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPP----KAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLC 81 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~ 81 (180)
.++|+|+++|+||++ .+..+. ......+.+.+.+.......+.++++++||||||.+++.++.++|..++++++
T Consensus 129 ~~~~~vi~~D~rG~G--~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl 206 (402)
T PLN02894 129 ASRFRVIAIDQLGWG--GSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLIL 206 (402)
T ss_pred HhCCEEEEECCCCCC--CCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEE
Confidence 457999999999995 333221 11222222333333333344556899999999999999999999999999998
Q ss_pred eccCCCCC-------------C---------------------------------------------c------c---c-
Q 030264 82 LGYPLKGM-------------N---------------------------------------------G------A---V- 93 (180)
Q Consensus 82 ~~~~~~~~-------------~---------------------------------------------~------~---~- 93 (180)
++++.... . . . .
T Consensus 207 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~ 286 (402)
T PLN02894 207 VGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLT 286 (402)
T ss_pred ECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHH
Confidence 76321100 0 0 0 0
Q ss_pred ---------------------------c---hhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCc
Q 030264 94 ---------------------------R---DELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHS 143 (180)
Q Consensus 94 ---------------------------~---~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 143 (180)
. ...+.++++|+++++|++|.+.+ ....++.+.....+++++++++||.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~ 365 (402)
T PLN02894 287 DYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHF 365 (402)
T ss_pred HHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCe
Confidence 0 01245578999999999998664 5566666666545899999999999
Q ss_pred cccccccccccccchhHHHHHHHHHHHHHHHHhhcC
Q 030264 144 FKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSLGE 179 (180)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 179 (180)
.+. +.++.+++.+.+|++..+..
T Consensus 366 ~~~-------------E~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 366 VFL-------------DNPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred eec-------------cCHHHHHHHHHHHHHHhccC
Confidence 887 66899999999999887643
No 43
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.84 E-value=4.9e-20 Score=123.07 Aligned_cols=165 Identities=18% Similarity=0.184 Sum_probs=123.3
Q ss_pred cCCceEEEEEeccCCCCCCCC-CCCchH---------HHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcccc
Q 030264 5 ALDAVEVVTFDYPYIAGGKRK-APPKAE---------KLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI 74 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~-~~~~~~---------~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~ 74 (180)
|..||.|++||+.+-..-++. ...... ....++...+++++.+.+..+|+++|+||||.++..+....+
T Consensus 64 A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~- 142 (242)
T KOG3043|consen 64 ALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP- 142 (242)
T ss_pred hcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-
Confidence 567999999997651100111 111111 224788899999998877889999999999999998888876
Q ss_pred ccceEEEeccCCCCCCcccchhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCC----cEEEEEcCCCCcccccccc
Q 030264 75 AASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSL----SELHLIDGGDHSFKIGKKH 150 (180)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----~~~~~~~~~~H~~~~~~~~ 150 (180)
.+.++++.-+.+. ..+.+.++.+|+|+++++.|+.+|+..+..+.+.+..+ .++.+|+|-+|+|+..+
T Consensus 143 ~f~a~v~~hps~~------d~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r-- 214 (242)
T KOG3043|consen 143 EFDAGVSFHPSFV------DSADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARR-- 214 (242)
T ss_pred hheeeeEecCCcC------ChhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhc--
Confidence 5666665332221 25568888999999999999999999999999998765 36999999999999632
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHhhc
Q 030264 151 LQTMGTTQDEMEGLAVQAIAAFISKSLG 178 (180)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 178 (180)
.+.+...+....+++++.+..||+++++
T Consensus 215 ~~~~~Ped~~~~eea~~~~~~Wf~~y~~ 242 (242)
T KOG3043|consen 215 ANISSPEDKKAAEEAYQRFISWFKHYLA 242 (242)
T ss_pred cCCCChhHHHHHHHHHHHHHHHHHHhhC
Confidence 1224445556688999999999998763
No 44
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.84 E-value=1e-19 Score=129.20 Aligned_cols=156 Identities=17% Similarity=0.148 Sum_probs=113.6
Q ss_pred cCCceEEEEEeccCCCCCCCCCC--CchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEe
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAP--PKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCL 82 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~ 82 (180)
.++.+.|+++|++|+| .++++. ...+.....+.+.+++.+...+..+..|+|||+||+++..+|.++|++|..++++
T Consensus 113 La~~~~vyaiDllG~G-~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLv 191 (365)
T KOG4409|consen 113 LAKIRNVYAIDLLGFG-RSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILV 191 (365)
T ss_pred hhhcCceEEecccCCC-CCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEe
Confidence 3458999999999995 333332 2233334567777777777778889999999999999999999999999999997
Q ss_pred ccCCCCC-C--c---------cc---------------------------------------------------------
Q 030264 83 GYPLKGM-N--G---------AV--------------------------------------------------------- 93 (180)
Q Consensus 83 ~~~~~~~-~--~---------~~--------------------------------------------------------- 93 (180)
++..... + + ..
T Consensus 192 sP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~ 271 (365)
T KOG4409|consen 192 SPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQ 271 (365)
T ss_pred cccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCC
Confidence 7432111 0 0 00
Q ss_pred ------------------ch---hhhccC--CCcEEEEeecCCCCCChHHHHHHHHH-ccCCcEEEEEcCCCCccccccc
Q 030264 94 ------------------RD---ELLLQI--TVPIMFVQGSKDGLCPLDKLEAVRKK-MKSLSELHLIDGGDHSFKIGKK 149 (180)
Q Consensus 94 ------------------~~---~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~~H~~~~~~~ 149 (180)
+. ..+..+ .+|+++++|++| .++.....++... ....++++++|++||....
T Consensus 272 ~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~d-WmD~~~g~~~~~~~~~~~~~~~~v~~aGHhvyl--- 347 (365)
T KOG4409|consen 272 NPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRD-WMDKNAGLEVTKSLMKEYVEIIIVPGAGHHVYL--- 347 (365)
T ss_pred CCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcc-cccchhHHHHHHHhhcccceEEEecCCCceeec---
Confidence 00 022333 499999999999 4566666666655 3444999999999999887
Q ss_pred cccccccchhHHHHHHHHHHHHHHHH
Q 030264 150 HLQTMGTTQDEMEGLAVQAIAAFISK 175 (180)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~i~~fl~~ 175 (180)
++++.+++.+.+++++
T Consensus 348 ----------Dnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 348 ----------DNPEFFNQIVLEECDK 363 (365)
T ss_pred ----------CCHHHHHHHHHHHHhc
Confidence 6689999999998875
No 45
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.83 E-value=2.9e-19 Score=132.11 Aligned_cols=158 Identities=16% Similarity=0.120 Sum_probs=118.2
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCchHHHH-HHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEec
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPKAEKLV-EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLG 83 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~ 83 (180)
+++||+|+++|++|. |.+.......... +++.+++++++...+.++++++||||||.+++.++..++.+++++++++
T Consensus 91 ~~~G~~V~~~D~~g~--g~s~~~~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~ 168 (350)
T TIGR01836 91 LERGQDVYLIDWGYP--DRADRYLTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMV 168 (350)
T ss_pred HHCCCeEEEEeCCCC--CHHHhcCCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEec
Confidence 567999999999987 4433333444443 4578888888888777899999999999999999999888899999887
Q ss_pred cCCCCC-------------------------Cc---------------cc--------------------------c---
Q 030264 84 YPLKGM-------------------------NG---------------AV--------------------------R--- 94 (180)
Q Consensus 84 ~~~~~~-------------------------~~---------------~~--------------------------~--- 94 (180)
+|+.-. +. .+ .
T Consensus 169 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~ 248 (350)
T TIGR01836 169 TPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSP 248 (350)
T ss_pred cccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCc
Confidence 654310 00 00 0
Q ss_pred ------------------------------hhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCC-cEEEEEcCCCCc
Q 030264 95 ------------------------------DELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSL-SELHLIDGGDHS 143 (180)
Q Consensus 95 ------------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~H~ 143 (180)
...++++++|+++++|++|.++|++.+..+.+.++.. +++++++ +||.
T Consensus 249 ~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~ 327 (350)
T TIGR01836 249 DQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHI 327 (350)
T ss_pred CccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCE
Confidence 0013457899999999999999999999999887643 6788887 4777
Q ss_pred cccccccccccccchhHHHHHHHHHHHHHHHH
Q 030264 144 FKIGKKHLQTMGTTQDEMEGLAVQAIAAFISK 175 (180)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 175 (180)
.....+ ...+++++.+.+|+.+
T Consensus 328 ~~~~~~----------~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 328 GIYVSG----------KAQKEVPPAIGKWLQA 349 (350)
T ss_pred EEEECc----------hhHhhhhHHHHHHHHh
Confidence 433221 4578999999999976
No 46
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.83 E-value=2.1e-19 Score=131.70 Aligned_cols=156 Identities=18% Similarity=0.228 Sum_probs=111.1
Q ss_pred cCCceEEEEEeccCCCCCCCCC----C---CchHHHHHHHHHHHHHHHh-------------------hCC-CCcEEEEe
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKA----P---PKAEKLVEFHTDVVKGAVA-------------------KFP-GHPLILAG 57 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~----~---~~~~~~~~~~~~~~~~~~~-------------------~~~-~~~i~l~G 57 (180)
+++||.|+++|+||++ .+.. . ..+....+|+...++.+++ .++ ..|++++|
T Consensus 71 ~~~G~~V~~~D~rGHG--~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~G 148 (332)
T TIGR01607 71 NKNGYSVYGLDLQGHG--ESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIG 148 (332)
T ss_pred HHCCCcEEEecccccC--CCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEee
Confidence 4689999999999994 3321 1 3455667778777777654 234 56899999
Q ss_pred eChhHHHHHHHhhccc--------cccceEEEeccCCC----C--------------------------C-C-ccc-c--
Q 030264 58 KSMGSRVSCMVACKED--------IAASAVLCLGYPLK----G--------------------------M-N-GAV-R-- 94 (180)
Q Consensus 58 ~S~Gg~~a~~~a~~~~--------~~~~~~~~~~~~~~----~--------------------------~-~-~~~-~-- 94 (180)
|||||.+++.++...+ ..+++++++++++. . . . ... +
T Consensus 149 hSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~ 228 (332)
T TIGR01607 149 LSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSP 228 (332)
T ss_pred ccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccCh
Confidence 9999999999886532 25778876553210 0 0 0 000 0
Q ss_pred --------------------------------hhhhccC--CCcEEEEeecCCCCCChHHHHHHHHHccC-CcEEEEEcC
Q 030264 95 --------------------------------DELLLQI--TVPIMFVQGSKDGLCPLDKLEAVRKKMKS-LSELHLIDG 139 (180)
Q Consensus 95 --------------------------------~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~ 139 (180)
...+..+ ++|+|+++|++|++++++.+..+++.+.. .++++++++
T Consensus 229 ~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g 308 (332)
T TIGR01607 229 YVNDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLED 308 (332)
T ss_pred hhhhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECC
Confidence 0022344 68999999999999999999998877653 489999999
Q ss_pred CCCccccccccccccccchhHHHHHHHHHHHHHHH
Q 030264 140 GDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFIS 174 (180)
Q Consensus 140 ~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 174 (180)
++|.+.... ..+++.+.+.+||+
T Consensus 309 ~~H~i~~E~------------~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 309 MDHVITIEP------------GNEEVLKKIIEWIS 331 (332)
T ss_pred CCCCCccCC------------CHHHHHHHHHHHhh
Confidence 999977632 25789999999985
No 47
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.83 E-value=8e-20 Score=127.06 Aligned_cols=146 Identities=21% Similarity=0.251 Sum_probs=114.0
Q ss_pred eEEEEEeccCCCCCCCCC---CCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEeccC
Q 030264 9 VEVVTFDYPYIAGGKRKA---PPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 85 (180)
Q Consensus 9 ~~v~~~d~~g~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~ 85 (180)
|.|+++|+||+ |.+.+ ........+++...++.+++.++.+++.++||||||.+++.++..+|++++++++.+.+
T Consensus 1 f~vi~~d~rG~--g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGF--GYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTS--TTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCC--CCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 78999999999 55544 33334446888888888888888888999999999999999999999999999998864
Q ss_pred C--C--------CC---Cccc-----------------------------------------------------------
Q 030264 86 L--K--------GM---NGAV----------------------------------------------------------- 93 (180)
Q Consensus 86 ~--~--------~~---~~~~----------------------------------------------------------- 93 (180)
. . .. ....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (230)
T PF00561_consen 79 PDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNA 158 (230)
T ss_dssp SHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred ccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhcccc
Confidence 0 0 00 0000
Q ss_pred --------chhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHH
Q 030264 94 --------RDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLA 165 (180)
Q Consensus 94 --------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~ 165 (180)
....+..+++|+++++|++|+++|++....+.+.++ +.++++++++||.... +.++++
T Consensus 159 ~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~-~~~~~~~~~~GH~~~~-------------~~~~~~ 224 (230)
T PF00561_consen 159 LGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIP-NSQLVLIEGSGHFAFL-------------EGPDEF 224 (230)
T ss_dssp HHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHST-TEEEEEETTCCSTHHH-------------HSHHHH
T ss_pred ccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcC-CCEEEECCCCChHHHh-------------cCHHhh
Confidence 001355789999999999999999999999877776 5999999999999776 556766
Q ss_pred HHHHH
Q 030264 166 VQAIA 170 (180)
Q Consensus 166 ~~~i~ 170 (180)
.+.+.
T Consensus 225 ~~~i~ 229 (230)
T PF00561_consen 225 NEIII 229 (230)
T ss_dssp HHHHH
T ss_pred hhhhc
Confidence 66553
No 48
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.83 E-value=1.9e-19 Score=133.16 Aligned_cols=156 Identities=16% Similarity=0.080 Sum_probs=110.4
Q ss_pred cCCceEEEEEeccCCCCCCCCCC-----C------chHHHHHHHHHHHHHHHhhCCCCc-EEEEeeChhHHHHHHHhhcc
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAP-----P------KAEKLVEFHTDVVKGAVAKFPGHP-LILAGKSMGSRVSCMVACKE 72 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~-----~------~~~~~~~~~~~~~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~ 72 (180)
..++|.|+++|+||+..|++.+. . ......+++.+.+..+...+..++ ++++||||||.+++.++.++
T Consensus 69 ~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~ 148 (351)
T TIGR01392 69 DTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDY 148 (351)
T ss_pred CCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHC
Confidence 36799999999999421433221 0 011224455555555555566667 99999999999999999999
Q ss_pred ccccceEEEeccCCCCC------------------------------C--------------------------------
Q 030264 73 DIAASAVLCLGYPLKGM------------------------------N-------------------------------- 90 (180)
Q Consensus 73 ~~~~~~~~~~~~~~~~~------------------------------~-------------------------------- 90 (180)
|.+++++++++...... +
T Consensus 149 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 228 (351)
T TIGR01392 149 PERVRAIVVLATSARHSAWCIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSG 228 (351)
T ss_pred hHhhheEEEEccCCcCCHHHHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccc
Confidence 99999999877431100 0
Q ss_pred -------------cccc-----------------------------------hhhhccCCCcEEEEeecCCCCCChHHHH
Q 030264 91 -------------GAVR-----------------------------------DELLLQITVPIMFVQGSKDGLCPLDKLE 122 (180)
Q Consensus 91 -------------~~~~-----------------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 122 (180)
..+. .+.++++++|+|+|+|++|.++|++.++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~ 308 (351)
T TIGR01392 229 ESPASGFDTRFQVESYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESR 308 (351)
T ss_pred cccccccCccchHHHHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHH
Confidence 0000 0123467899999999999999999999
Q ss_pred HHHHHccCCcEEE-----EEcCCCCccccccccccccccchhHHHHHHHHHHHHHHH
Q 030264 123 AVRKKMKSLSELH-----LIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFIS 174 (180)
Q Consensus 123 ~~~~~~~~~~~~~-----~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 174 (180)
.+.+.++. .++. +++++||..+. +.++++++.+.+||+
T Consensus 309 ~~a~~i~~-~~~~v~~~~i~~~~GH~~~l-------------e~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 309 ELAKALPA-AGLRVTYVEIESPYGHDAFL-------------VETDQVEELIRGFLR 351 (351)
T ss_pred HHHHHHhh-cCCceEEEEeCCCCCcchhh-------------cCHHHHHHHHHHHhC
Confidence 99888864 4333 55789999887 668999999999974
No 49
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.82 E-value=4.2e-19 Score=131.77 Aligned_cols=153 Identities=14% Similarity=0.130 Sum_probs=110.6
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCc---hHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEE
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPK---AEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLC 81 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~ 81 (180)
.+++|+|+++|+||+ |.+..+.. .....+++.+.+..+......+++.++|||+||.+++.++.++|.+++++++
T Consensus 150 L~~~~~Via~DlpG~--G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lIL 227 (383)
T PLN03084 150 LSKNYHAIAFDWLGF--GFSDKPQPGYGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLIL 227 (383)
T ss_pred HhcCCEEEEECCCCC--CCCCCCcccccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEE
Confidence 456899999999999 44433321 0112233333333433434556899999999999999999999999999999
Q ss_pred eccCCCCC----Cc---------------------------c-----cch------------------------h-----
Q 030264 82 LGYPLKGM----NG---------------------------A-----VRD------------------------E----- 96 (180)
Q Consensus 82 ~~~~~~~~----~~---------------------------~-----~~~------------------------~----- 96 (180)
++++.... +. . ... .
T Consensus 228 i~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~ 307 (383)
T PLN03084 228 LNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKE 307 (383)
T ss_pred ECCCCccccccchHHHHHHHHHHhhhhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcc
Confidence 88653210 00 0 000 0
Q ss_pred ------hh------ccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHH
Q 030264 97 ------LL------LQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGL 164 (180)
Q Consensus 97 ------~~------~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~ 164 (180)
.+ .++++|+++++|+.|.+++.+..+++.+.. +.++.++++++|..+. +.+++
T Consensus 308 l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~~--~a~l~vIp~aGH~~~~-------------E~Pe~ 372 (383)
T PLN03084 308 LKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKSS--QHKLIELPMAGHHVQE-------------DCGEE 372 (383)
T ss_pred cchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHhc--CCeEEEECCCCCCcch-------------hCHHH
Confidence 00 236889999999999999998888887763 5899999999999888 77899
Q ss_pred HHHHHHHHHH
Q 030264 165 AVQAIAAFIS 174 (180)
Q Consensus 165 ~~~~i~~fl~ 174 (180)
+++.|.+|+.
T Consensus 373 v~~~I~~Fl~ 382 (383)
T PLN03084 373 LGGIISGILS 382 (383)
T ss_pred HHHHHHHHhh
Confidence 9999999986
No 50
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.82 E-value=3.5e-19 Score=139.93 Aligned_cols=164 Identities=19% Similarity=0.224 Sum_probs=118.4
Q ss_pred ccCCceEEEEEeccCCCC-CCCCCC----CchHHHHHHHHHHHHHHHhh--CCCCcEEEEeeChhHHHHHHHhhcccccc
Q 030264 4 KALDAVEVVTFDYPYIAG-GKRKAP----PKAEKLVEFHTDVVKGAVAK--FPGHPLILAGKSMGSRVSCMVACKEDIAA 76 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~-g~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~ 76 (180)
.+.+||.|+.+|+||..+ |..... .......+|+.+.++++.+. .+.++++++|+|.||.++++++.+.+ .+
T Consensus 419 ~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f 497 (620)
T COG1506 419 LASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RF 497 (620)
T ss_pred HhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hh
Confidence 478999999999999641 111000 11112356777777755543 33459999999999999999999987 44
Q ss_pred ceEEEeccCCC---------------------CCC-------cccchhhhccCCCcEEEEeecCCCCCChHHHHHHHHHc
Q 030264 77 SAVLCLGYPLK---------------------GMN-------GAVRDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKM 128 (180)
Q Consensus 77 ~~~~~~~~~~~---------------------~~~-------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 128 (180)
++.+....... .+. ...+...+.++++|+|+|||+.|..++.+++..+++++
T Consensus 498 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL 577 (620)
T COG1506 498 KAAVAVAGGVDWLLYFGESTEGLRFDPEENGGGPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDAL 577 (620)
T ss_pred heEEeccCcchhhhhccccchhhcCCHHHhCCCcccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHH
Confidence 44443222111 000 11122356788999999999999999999999999888
Q ss_pred cCC---cEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHhhcCC
Q 030264 129 KSL---SELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSLGER 180 (180)
Q Consensus 129 ~~~---~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 180 (180)
... +++++||+.+|.+... ++....+..+++|++++++.+
T Consensus 578 ~~~g~~~~~~~~p~e~H~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 620 (620)
T COG1506 578 KRKGKPVELVVFPDEGHGFSRP------------ENRVKVLKEILDWFKRHLKQR 620 (620)
T ss_pred HHcCceEEEEEeCCCCcCCCCc------------hhHHHHHHHHHHHHHHHhcCC
Confidence 643 8999999999998762 667889999999999998764
No 51
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.82 E-value=3.8e-19 Score=132.36 Aligned_cols=151 Identities=18% Similarity=0.257 Sum_probs=107.5
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEecc
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 84 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~ 84 (180)
..++|+|+++|+||++ .+........ .+++.+.+..+...++..+++++|||+||.+++.++..++.++.+++++++
T Consensus 154 l~~~~~v~~~d~~g~G--~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~ 230 (371)
T PRK14875 154 LAAGRPVIALDLPGHG--ASSKAVGAGS-LDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAP 230 (371)
T ss_pred HhcCCEEEEEcCCCCC--CCCCCCCCCC-HHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECc
Confidence 3457999999999994 4322211111 234444444444556666899999999999999999998889999998774
Q ss_pred CCCCC--C---------------------------ccc-------------------------------------chhhh
Q 030264 85 PLKGM--N---------------------------GAV-------------------------------------RDELL 98 (180)
Q Consensus 85 ~~~~~--~---------------------------~~~-------------------------------------~~~~~ 98 (180)
+.... . ... ....+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 310 (371)
T PRK14875 231 AGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRL 310 (371)
T ss_pred CCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHH
Confidence 31100 0 000 00134
Q ss_pred ccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHH
Q 030264 99 LQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISK 175 (180)
Q Consensus 99 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 175 (180)
.++++|+++++|++|..+|++....+ ..++++.+++++||.... +.++++.+.+.+|+++
T Consensus 311 ~~i~~Pvlii~g~~D~~vp~~~~~~l----~~~~~~~~~~~~gH~~~~-------------e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 311 ASLAIPVLVIWGEQDRIIPAAHAQGL----PDGVAVHVLPGAGHMPQM-------------EAAADVNRLLAEFLGK 370 (371)
T ss_pred hcCCCCEEEEEECCCCccCHHHHhhc----cCCCeEEEeCCCCCChhh-------------hCHHHHHHHHHHHhcc
Confidence 56889999999999999998766443 335899999999999887 6678999999999875
No 52
>PLN02511 hydrolase
Probab=99.81 E-value=1.4e-19 Score=135.10 Aligned_cols=163 Identities=17% Similarity=0.203 Sum_probs=112.7
Q ss_pred cCCceEEEEEeccCCCCCCCCC-CC--chHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccc--cceE
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKA-PP--KAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIA--ASAV 79 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~--~~~~ 79 (180)
.++||+|+++|+||++ .+.. .. ......+|+..+++++...++..+++++||||||.+++.++.+++.. +.++
T Consensus 126 ~~~g~~vv~~d~rG~G--~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~ 203 (388)
T PLN02511 126 RSKGWRVVVFNSRGCA--DSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGA 203 (388)
T ss_pred HHCCCEEEEEecCCCC--CCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEE
Confidence 4689999999999995 3321 11 12345789999999999888878999999999999999999987765 7777
Q ss_pred EEeccCCCC----------C--------------------------Cccc------------------------------
Q 030264 80 LCLGYPLKG----------M--------------------------NGAV------------------------------ 93 (180)
Q Consensus 80 ~~~~~~~~~----------~--------------------------~~~~------------------------------ 93 (180)
++++.|... . ...+
T Consensus 204 v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~ 283 (388)
T PLN02511 204 VSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDA 283 (388)
T ss_pred EEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHH
Confidence 776654320 0 0000
Q ss_pred ------chhhhccCCCcEEEEeecCCCCCChHHH-HHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHH
Q 030264 94 ------RDELLLQITVPIMFVQGSKDGLCPLDKL-EAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAV 166 (180)
Q Consensus 94 ------~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~ 166 (180)
....++++++|+|+|+|++|++++.+.. ....+.. +++++.+++++||......+ ... ....++.
T Consensus 284 yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~-p~~~l~~~~~gGH~~~~E~p----~~~---~~~~w~~ 355 (388)
T PLN02511 284 YYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKAN-PNCLLIVTPSGGHLGWVAGP----EAP---FGAPWTD 355 (388)
T ss_pred HHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcC-CCEEEEECCCcceeccccCC----CCC---CCCccHH
Confidence 0013557889999999999999987655 3343333 36999999999998554221 000 0012467
Q ss_pred HHHHHHHHHhh
Q 030264 167 QAIAAFISKSL 177 (180)
Q Consensus 167 ~~i~~fl~~~~ 177 (180)
+.+.+||+...
T Consensus 356 ~~i~~Fl~~~~ 366 (388)
T PLN02511 356 PVVMEFLEALE 366 (388)
T ss_pred HHHHHHHHHHH
Confidence 77888887654
No 53
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.81 E-value=1.2e-18 Score=129.93 Aligned_cols=162 Identities=14% Similarity=0.055 Sum_probs=115.3
Q ss_pred CCceEEEEEeccCCCCCCCCCCC------c------hHHHHHHHHHHHHHHHhhCCCCc-EEEEeeChhHHHHHHHhhcc
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPP------K------AEKLVEFHTDVVKGAVAKFPGHP-LILAGKSMGSRVSCMVACKE 72 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~------~------~~~~~~~~~~~~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~ 72 (180)
.++|+|+++|++|+..|++.+.. . .....+++.+.+..+.+.+..++ +.++||||||.+++.++.++
T Consensus 89 ~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~ 168 (379)
T PRK00175 89 TDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDY 168 (379)
T ss_pred ccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhC
Confidence 57999999999984213322110 0 01223444555555555566667 58999999999999999999
Q ss_pred ccccceEEEeccCCCCC---------------------------------------------------------------
Q 030264 73 DIAASAVLCLGYPLKGM--------------------------------------------------------------- 89 (180)
Q Consensus 73 ~~~~~~~~~~~~~~~~~--------------------------------------------------------------- 89 (180)
|.+++++++++......
T Consensus 169 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~ 248 (379)
T PRK00175 169 PDRVRSALVIASSARLSAQNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQS 248 (379)
T ss_pred hHhhhEEEEECCCcccCHHHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccc
Confidence 99999999877321100
Q ss_pred Ccc-------c-----------------------------------------chhhhccCCCcEEEEeecCCCCCChHHH
Q 030264 90 NGA-------V-----------------------------------------RDELLLQITVPIMFVQGSKDGLCPLDKL 121 (180)
Q Consensus 90 ~~~-------~-----------------------------------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 121 (180)
... . ..+.+.+|++|+|+|+|++|.++|++..
T Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~ 328 (379)
T PRK00175 249 GELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARS 328 (379)
T ss_pred cccccCCCccchHHHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHH
Confidence 000 0 0012356789999999999999999999
Q ss_pred HHHHHHccCC---cEEEEEc-CCCCccccccccccccccchhHHHHHHHHHHHHHHHHhhcCC
Q 030264 122 EAVRKKMKSL---SELHLID-GGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSLGER 180 (180)
Q Consensus 122 ~~~~~~~~~~---~~~~~~~-~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 180 (180)
+.+.+.++.. +++.+++ ++||..+. +.++++++.+.+||++...+|
T Consensus 329 ~~la~~i~~a~~~~~l~~i~~~~GH~~~l-------------e~p~~~~~~L~~FL~~~~~~~ 378 (379)
T PRK00175 329 REIVDALLAAGADVSYAEIDSPYGHDAFL-------------LDDPRYGRLVRAFLERAARER 378 (379)
T ss_pred HHHHHHHHhcCCCeEEEEeCCCCCchhHh-------------cCHHHHHHHHHHHHHhhhhcc
Confidence 9998888642 3777775 89999887 667899999999999877665
No 54
>PRK10985 putative hydrolase; Provisional
Probab=99.81 E-value=6.1e-19 Score=129.06 Aligned_cols=164 Identities=18% Similarity=0.157 Sum_probs=113.4
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCc--hHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcccc--ccceEE
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPK--AEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI--AASAVL 80 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~--~~~~~~ 80 (180)
+++||+|+++|+||++ +.+..... .....+|+..+++++.+.++..+++++||||||.+++.++.+++. .+.+++
T Consensus 84 ~~~G~~v~~~d~rG~g-~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v 162 (324)
T PRK10985 84 QKRGWLGVVMHFRGCS-GEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAV 162 (324)
T ss_pred HHCCCEEEEEeCCCCC-CCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEE
Confidence 4679999999999995 22211111 122367888888999887777799999999999998888877543 378888
Q ss_pred EeccCCCCC---------------------------------Ccc-------------c---------------------
Q 030264 81 CLGYPLKGM---------------------------------NGA-------------V--------------------- 93 (180)
Q Consensus 81 ~~~~~~~~~---------------------------------~~~-------------~--------------------- 93 (180)
+++.|+... .+. .
T Consensus 163 ~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y 242 (324)
T PRK10985 163 IVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYY 242 (324)
T ss_pred EEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHH
Confidence 877663200 000 0
Q ss_pred ----chhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHH
Q 030264 94 ----RDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAI 169 (180)
Q Consensus 94 ----~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i 169 (180)
..+.++++++|+++++|++|++++++....+.+.. +++++.+++++||...... ... ....+.-+.+
T Consensus 243 ~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~GH~~~~~g-------~~~-~~~~w~~~~~ 313 (324)
T PRK10985 243 RQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLP-PNVEYQLTEHGGHVGFVGG-------TLL-KPQMWLEQRI 313 (324)
T ss_pred HHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhC-CCeEEEECCCCCceeeCCC-------CCC-CCCccHHHHH
Confidence 00235678899999999999999988777765444 4688899999999855422 100 0124666778
Q ss_pred HHHHHHhhc
Q 030264 170 AAFISKSLG 178 (180)
Q Consensus 170 ~~fl~~~~~ 178 (180)
.+|++..++
T Consensus 314 ~~~~~~~~~ 322 (324)
T PRK10985 314 PDWLTTYLE 322 (324)
T ss_pred HHHHHHhhc
Confidence 888876654
No 55
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.81 E-value=1.7e-19 Score=118.91 Aligned_cols=151 Identities=21% Similarity=0.318 Sum_probs=119.4
Q ss_pred eEEEEEeccCCCCCCCCCCCc---hHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEeccC
Q 030264 9 VEVVTFDYPYIAGGKRKAPPK---AEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 85 (180)
Q Consensus 9 ~~v~~~d~~g~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~ 85 (180)
+++++.|-||+ |.++++.+ .+-+..|.+.+++-+.. +.-+++.++|+|=||..++.+|+++++.+..+++++..
T Consensus 72 ~TivawDPpGY--G~SrPP~Rkf~~~ff~~Da~~avdLM~a-Lk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ 148 (277)
T KOG2984|consen 72 VTIVAWDPPGY--GTSRPPERKFEVQFFMKDAEYAVDLMEA-LKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAA 148 (277)
T ss_pred eEEEEECCCCC--CCCCCCcccchHHHHHHhHHHHHHHHHH-hCCCCeeEeeecCCCeEEEEeeccChhhhhhheeeccc
Confidence 89999999999 78877754 33457788888877665 35668999999999999999999999999999987742
Q ss_pred CC----------CC-----------------------------------------CcccchhhhccCCCcEEEEeecCCC
Q 030264 86 LK----------GM-----------------------------------------NGAVRDELLLQITVPIMFVQGSKDG 114 (180)
Q Consensus 86 ~~----------~~-----------------------------------------~~~~~~~~~~~~~~P~l~i~g~~D~ 114 (180)
.. ++ ++.+....+.+++||+|+++|+.|+
T Consensus 149 ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp 228 (277)
T KOG2984|consen 149 AYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDP 228 (277)
T ss_pred ceecchhHHHHhchHHHhhhhhhhcchHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCC
Confidence 11 00 0011223578899999999999999
Q ss_pred CCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHh
Q 030264 115 LCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKS 176 (180)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 176 (180)
+++..++.-+-... +.+++.++|.++|.++... +++++..+.+||++.
T Consensus 229 ~~~~~hv~fi~~~~-~~a~~~~~peGkHn~hLry-------------a~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 229 FCGDPHVCFIPVLK-SLAKVEIHPEGKHNFHLRY-------------AKEFNKLVLDFLKST 276 (277)
T ss_pred CCCCCCccchhhhc-ccceEEEccCCCcceeeec-------------hHHHHHHHHHHHhcc
Confidence 99887776555443 4699999999999999855 689999999999863
No 56
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.81 E-value=2.6e-18 Score=122.97 Aligned_cols=155 Identities=16% Similarity=0.156 Sum_probs=110.7
Q ss_pred cCCceEEEEEeccCCCCCCCCCC-CchHHHHHHHHHHHHHHHhhCC-CCcEEEEeeChhHHHHHHHhhccccccceEEEe
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAP-PKAEKLVEFHTDVVKGAVAKFP-GHPLILAGKSMGSRVSCMVACKEDIAASAVLCL 82 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~ 82 (180)
+++||.|+++|++|+ |.+... .......+|+..++++++...+ .++++++|||+||.+++.++.. +..+++++++
T Consensus 54 ~~~G~~v~~~Dl~G~--G~S~~~~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~ 130 (274)
T TIGR03100 54 AEAGFPVLRFDYRGM--GDSEGENLGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLL 130 (274)
T ss_pred HHCCCEEEEeCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEE
Confidence 467999999999999 444332 4555667888999999887653 3579999999999999999865 4689999998
Q ss_pred ccCCCCCCc----------------------c--------------------c-c--------------hhhhccCCCcE
Q 030264 83 GYPLKGMNG----------------------A--------------------V-R--------------DELLLQITVPI 105 (180)
Q Consensus 83 ~~~~~~~~~----------------------~--------------------~-~--------------~~~~~~~~~P~ 105 (180)
++++..... . . . ...+..+++|+
T Consensus 131 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ 210 (274)
T TIGR03100 131 NPWVRTEAAQAASRIRHYYLGQLLSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPV 210 (274)
T ss_pred CCccCCcccchHHHHHHHHHHHHhChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcE
Confidence 855331110 0 0 0 01234668899
Q ss_pred EEEeecCCCCCChHH-----HHHHHHHcc-CCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHH
Q 030264 106 MFVQGSKDGLCPLDK-----LEAVRKKMK-SLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFIS 174 (180)
Q Consensus 106 l~i~g~~D~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 174 (180)
++++|+.|...+.-. ...+.+.+. .+++++.+++++|.+... +..+++.+.+.+||+
T Consensus 211 ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e------------~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 211 LFILSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDR------------VWREWVAARTTEWLR 273 (274)
T ss_pred EEEEcCcchhHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccH------------HHHHHHHHHHHHHHh
Confidence 999999998753211 033444443 459999999999987441 556889999999995
No 57
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.80 E-value=9.2e-19 Score=114.47 Aligned_cols=147 Identities=18% Similarity=0.200 Sum_probs=112.5
Q ss_pred cCCceEEEEEeccCCCCCCCCCC-CchHHHHHHHHHHHHHHHhhCCCCcE-EEEeeChhHHHHHHHhhccccccceEEEe
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAP-PKAEKLVEFHTDVVKGAVAKFPGHPL-ILAGKSMGSRVSCMVACKEDIAASAVLCL 82 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i-~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~ 82 (180)
..+||.++.||+||.+ .+... ..--.-.+|...+++|++...+..+. .+.|+|+|+.+++.++.+.++ ....+..
T Consensus 57 ~~~G~atlRfNfRgVG--~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~ 133 (210)
T COG2945 57 VKRGFATLRFNFRGVG--RSQGEFDNGIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISI 133 (210)
T ss_pred HhCCceEEeecccccc--cccCcccCCcchHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc-ccceeec
Confidence 4689999999999984 33322 22223358999999999998887765 789999999999999999754 3333333
Q ss_pred ccCCCCCCcccchhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHH
Q 030264 83 GYPLKGMNGAVRDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEME 162 (180)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~ 162 (180)
.++.. .+....+....+|.++++|+.|.+++.....++.+. ...+++.+++++|+|+. ..
T Consensus 134 ~p~~~----~~dfs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~--~~~~~i~i~~a~HFF~g--------------Kl 193 (210)
T COG2945 134 LPPIN----AYDFSFLAPCPSPGLVIQGDADDVVDLVAVLKWQES--IKITVITIPGADHFFHG--------------KL 193 (210)
T ss_pred cCCCC----chhhhhccCCCCCceeEecChhhhhcHHHHHHhhcC--CCCceEEecCCCceecc--------------cH
Confidence 33322 345566777889999999999999999998888776 34888999999999984 35
Q ss_pred HHHHHHHHHHHH
Q 030264 163 GLAVQAIAAFIS 174 (180)
Q Consensus 163 ~~~~~~i~~fl~ 174 (180)
..+.+.+.+|+.
T Consensus 194 ~~l~~~i~~~l~ 205 (210)
T COG2945 194 IELRDTIADFLE 205 (210)
T ss_pred HHHHHHHHHHhh
Confidence 678888888884
No 58
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.79 E-value=8.4e-18 Score=122.22 Aligned_cols=152 Identities=19% Similarity=0.188 Sum_probs=105.8
Q ss_pred CCceEEEEEeccCCCCCCCCCCCc-hHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEecc
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPPK-AEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 84 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~ 84 (180)
.++|+|+++|+||+ |.+..... .....+++.+.+..+.+.+..++++++||||||.+++.++.++|..+.++++.+.
T Consensus 51 ~~~~~vi~~D~~G~--G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~ 128 (306)
T TIGR01249 51 PETYRIVLFDQRGC--GKSTPHACLEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGI 128 (306)
T ss_pred ccCCEEEEECCCCC--CCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeecc
Confidence 46899999999999 54443321 1122344445555555556667899999999999999999999988998888653
Q ss_pred CCC--------------------------CCCccc-------------------------------c-------------
Q 030264 85 PLK--------------------------GMNGAV-------------------------------R------------- 94 (180)
Q Consensus 85 ~~~--------------------------~~~~~~-------------------------------~------------- 94 (180)
... ...... .
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (306)
T TIGR01249 129 FLLREKEWSWFYEGGASMIYPDAWQRFMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVS 208 (306)
T ss_pred ccCCHHHHHHHHhcchhhhCHHHHHHHhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccc
Confidence 210 000000 0
Q ss_pred ------------h-------------------hhhccC-CCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCC
Q 030264 95 ------------D-------------------ELLLQI-TVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDH 142 (180)
Q Consensus 95 ------------~-------------------~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 142 (180)
. +.+.++ ++|+|+++|++|.++|.+.+..+.+.++ +.++++++++||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~-~~~~~~~~~~gH 287 (306)
T TIGR01249 209 TAEDFKFSLAFARLENHYFVNKGFLDVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFP-EAELKVTNNAGH 287 (306)
T ss_pred cccchHHHHHHHHHHHhHHHHhchhcCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCC-CCEEEEECCCCC
Confidence 0 011234 5899999999999999999999988876 589999999999
Q ss_pred ccccccccccccccchhHHHHHHHHHHHHHHHHh
Q 030264 143 SFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKS 176 (180)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 176 (180)
.... +...+.+.+|+...
T Consensus 288 ~~~~----------------~~~~~~i~~~~~~~ 305 (306)
T TIGR01249 288 SAFD----------------PNNLAALVHALETY 305 (306)
T ss_pred CCCC----------------hHHHHHHHHHHHHh
Confidence 9654 34556666666543
No 59
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.79 E-value=2.5e-17 Score=114.87 Aligned_cols=167 Identities=16% Similarity=0.165 Sum_probs=122.5
Q ss_pred ccCCceEEEEEeccCCCCCCCCCCC--------------chHHHHHHHHHHHHHHHhhC--CCCcEEEEeeChhHHHHHH
Q 030264 4 KALDAVEVVTFDYPYIAGGKRKAPP--------------KAEKLVEFHTDVVKGAVAKF--PGHPLILAGKSMGSRVSCM 67 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~~~~--------------~~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~ 67 (180)
.|..||.|+++|+-+.. +...... .......++...++++...- +.++|+++|+||||.+++.
T Consensus 50 lA~~Gy~v~~Pdl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~ 128 (236)
T COG0412 50 LAKAGYVVLAPDLYGRQ-GDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALL 128 (236)
T ss_pred HHhCCcEEEechhhccC-CCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHH
Confidence 46789999999987743 1111111 01344567777888887643 3558999999999999999
Q ss_pred HhhccccccceEEEeccCCCCCCcccchhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCC---cEEEEEcCCCCcc
Q 030264 68 VACKEDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSL---SELHLIDGGDHSF 144 (180)
Q Consensus 68 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~~~H~~ 144 (180)
++.+.+ .+++.+++-... . ........++++|+|+++|+.|+.+|......+.+.+... +++.+|+++.|.|
T Consensus 129 ~a~~~~-~v~a~v~fyg~~--~--~~~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F 203 (236)
T COG0412 129 AATRAP-EVKAAVAFYGGL--I--ADDTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGF 203 (236)
T ss_pred hhcccC-CccEEEEecCCC--C--CCcccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCcccc
Confidence 999965 677777633111 1 1112236789999999999999999999888888776544 7889999999999
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHHHHhhc
Q 030264 145 KIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSLG 178 (180)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 178 (180)
..... .. ...++....+..|+.+.+||++++.
T Consensus 204 ~~~~~-~~-~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 204 ANDRA-DY-HPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred ccCCC-cc-cccCCHHHHHHHHHHHHHHHHHhcc
Confidence 96420 00 2567788899999999999998875
No 60
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.78 E-value=2.6e-17 Score=117.77 Aligned_cols=153 Identities=16% Similarity=0.167 Sum_probs=104.4
Q ss_pred CCceEEEEEeccCCCCCCCCCC-CchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEecc
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAP-PKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 84 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~ 84 (180)
.+||+|+++|+||+ |.+... .....+.+...++.+.+......++++++||||||.++..++.+++..++++++++.
T Consensus 43 ~~g~~vi~~dl~g~--G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~ 120 (273)
T PLN02211 43 NSGYKVTCIDLKSA--GIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAA 120 (273)
T ss_pred hCCCEEEEecccCC--CCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEecc
Confidence 46999999999999 433222 111222223333333333322346899999999999999999988889999998753
Q ss_pred CCC--C----------C------C----------------cc-c-------------ch---------------------
Q 030264 85 PLK--G----------M------N----------------GA-V-------------RD--------------------- 95 (180)
Q Consensus 85 ~~~--~----------~------~----------------~~-~-------------~~--------------------- 95 (180)
... + . . .. . +.
T Consensus 121 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (273)
T PLN02211 121 TMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSA 200 (273)
T ss_pred ccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccc
Confidence 211 0 0 0 00 0 00
Q ss_pred ---hhhccC-CCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHH
Q 030264 96 ---ELLLQI-TVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAA 171 (180)
Q Consensus 96 ---~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 171 (180)
+....+ ++|+++|.|++|..+|++..+.+.+.++ ..+++.++ +||..+. +.++++.+.|.+
T Consensus 201 ~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~-~~~~~~l~-~gH~p~l-------------s~P~~~~~~i~~ 265 (273)
T PLN02211 201 RFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWP-PSQVYELE-SDHSPFF-------------STPFLLFGLLIK 265 (273)
T ss_pred cccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCC-ccEEEEEC-CCCCccc-------------cCHHHHHHHHHH
Confidence 001123 6799999999999999999999988876 36888887 7999777 667888888888
Q ss_pred HHHH
Q 030264 172 FISK 175 (180)
Q Consensus 172 fl~~ 175 (180)
....
T Consensus 266 ~a~~ 269 (273)
T PLN02211 266 AAAS 269 (273)
T ss_pred HHHH
Confidence 7654
No 61
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.76 E-value=3.4e-17 Score=113.38 Aligned_cols=125 Identities=21% Similarity=0.314 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHhh-CCCCcEEEEeeChhHHHHHHHhhccccccceEEEeccCCCCCCcccchhhhccCCCcEEEEeecCC
Q 030264 35 EFHTDVVKGAVAK-FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQGSKD 113 (180)
Q Consensus 35 ~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 113 (180)
+.+.+.++...+. .+.++|+++|+|+||.+++.++.+++..+.++++++..+..... ........-.+|++++||+.|
T Consensus 88 ~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~-~~~~~~~~~~~pi~~~hG~~D 166 (216)
T PF02230_consen 88 ERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE-LEDRPEALAKTPILIIHGDED 166 (216)
T ss_dssp HHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC-CHCCHCCCCTS-EEEEEETT-
T ss_pred HHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc-ccccccccCCCcEEEEecCCC
Confidence 3444445443332 45569999999999999999999999999999998865542221 111111112789999999999
Q ss_pred CCCChHHHHHHHHHccC---CcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHhh
Q 030264 114 GLCPLDKLEAVRKKMKS---LSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSL 177 (180)
Q Consensus 114 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 177 (180)
+++|.+..++..+.+.. +++++.|+|.||.+.. +....+.+||++++
T Consensus 167 ~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~~-----------------~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 167 PVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEISP-----------------EELRDLREFLEKHI 216 (216)
T ss_dssp SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS--H-----------------HHHHHHHHHHHHH-
T ss_pred CcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCCH-----------------HHHHHHHHHHhhhC
Confidence 99999888887777654 3889999999998763 56777899998764
No 62
>PRK11071 esterase YqiA; Provisional
Probab=99.75 E-value=1.1e-16 Score=108.59 Aligned_cols=132 Identities=15% Similarity=0.167 Sum_probs=94.6
Q ss_pred CceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEeccCC
Q 030264 7 DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 86 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~ 86 (180)
.+|+|+++|+||+ + +++.+.+..+....+.++++++||||||.+++.++.+++. .+++++++.
T Consensus 31 ~~~~v~~~dl~g~--~------------~~~~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~ 93 (190)
T PRK11071 31 PDIEMIVPQLPPY--P------------ADAAELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFML---PAVVVNPAV 93 (190)
T ss_pred CCCeEEeCCCCCC--H------------HHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcCC---CEEEECCCC
Confidence 4799999999986 2 2344445555555566789999999999999999999763 345555443
Q ss_pred CC---------C-Cc-----ccch----------hhhc--cCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcC
Q 030264 87 KG---------M-NG-----AVRD----------ELLL--QITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDG 139 (180)
Q Consensus 87 ~~---------~-~~-----~~~~----------~~~~--~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (180)
.. . .. .+.. -.+. ...+|+++++|++|.++|++.+.++++. ++..+++|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~v~iihg~~De~V~~~~a~~~~~~----~~~~~~~g 169 (190)
T PRK11071 94 RPFELLTDYLGENENPYTGQQYVLESRHIYDLKVMQIDPLESPDLIWLLQQTGDEVLDYRQAVAYYAA----CRQTVEEG 169 (190)
T ss_pred CHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHhcCCccCCChhhEEEEEeCCCCcCCHHHHHHHHHh----cceEEECC
Confidence 31 0 00 0000 0111 2566889999999999999999999874 56668899
Q ss_pred CCCccccccccccccccchhHHHHHHHHHHHHHHH
Q 030264 140 GDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFIS 174 (180)
Q Consensus 140 ~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 174 (180)
++|.|.. .++.++.+.+|+.
T Consensus 170 gdH~f~~---------------~~~~~~~i~~fl~ 189 (190)
T PRK11071 170 GNHAFVG---------------FERYFNQIVDFLG 189 (190)
T ss_pred CCcchhh---------------HHHhHHHHHHHhc
Confidence 9999964 3788999999975
No 63
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.74 E-value=6.5e-18 Score=112.62 Aligned_cols=155 Identities=22% Similarity=0.265 Sum_probs=121.3
Q ss_pred CceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhh--CCCCcEEEEeeChhHHHHHHHhhccccccceEEEecc
Q 030264 7 DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK--FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 84 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~ 84 (180)
-+.+|+.++|||+ |.+.+.+..+.+.-|.+.+++++..+ .+..+++++|.|.||.+|+.+|++...++.++++-..
T Consensus 105 l~mnv~ivsYRGY--G~S~GspsE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENT 182 (300)
T KOG4391|consen 105 LKMNVLIVSYRGY--GKSEGSPSEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENT 182 (300)
T ss_pred cCceEEEEEeecc--ccCCCCccccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeech
Confidence 4678999999999 77777777777888899999999875 3445999999999999999999998889999987431
Q ss_pred CCC----------CCC-----------cccchhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCC-cEEEEEcCCCC
Q 030264 85 PLK----------GMN-----------GAVRDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSL-SELHLIDGGDH 142 (180)
Q Consensus 85 ~~~----------~~~-----------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~H 142 (180)
-+. ... .......+.+.+.|.||+.|..|.++|+.....+++.+++. .++..||++.|
T Consensus 183 F~SIp~~~i~~v~p~~~k~i~~lc~kn~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtH 262 (300)
T KOG4391|consen 183 FLSIPHMAIPLVFPFPMKYIPLLCYKNKWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTH 262 (300)
T ss_pred hccchhhhhheeccchhhHHHHHHHHhhhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCcc
Confidence 111 000 11122345567889999999999999999999999998866 78999999999
Q ss_pred ccccccccccccccchhHHHHHHHHHHHHHHHHhh
Q 030264 143 SFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSL 177 (180)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 177 (180)
.-.. ..+-.++.+.+|+.+..
T Consensus 263 NDT~--------------i~dGYfq~i~dFlaE~~ 283 (300)
T KOG4391|consen 263 NDTW--------------ICDGYFQAIEDFLAEVV 283 (300)
T ss_pred CceE--------------EeccHHHHHHHHHHHhc
Confidence 8332 12567888889987653
No 64
>PRK11460 putative hydrolase; Provisional
Probab=99.74 E-value=1.6e-16 Score=111.00 Aligned_cols=120 Identities=13% Similarity=0.095 Sum_probs=86.5
Q ss_pred HHHHHHHHHHhhC--CCCcEEEEeeChhHHHHHHHhhccccccceEEEeccCCCCCCcccchhhhccCCCcEEEEeecCC
Q 030264 36 FHTDVVKGAVAKF--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQGSKD 113 (180)
Q Consensus 36 ~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 113 (180)
.+.+.++++.... +.++|+++|||+||.+++.++..++..+.++++++..+...+ ......+|+++++|++|
T Consensus 86 ~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~~------~~~~~~~pvli~hG~~D 159 (232)
T PRK11460 86 TFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASLP------ETAPTATTIHLIHGGED 159 (232)
T ss_pred HHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccccc------ccccCCCcEEEEecCCC
Confidence 3444455554443 345899999999999999999888777777777653322111 12235789999999999
Q ss_pred CCCChHHHHHHHHHccC---CcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHhhc
Q 030264 114 GLCPLDKLEAVRKKMKS---LSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSLG 178 (180)
Q Consensus 114 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 178 (180)
+++|.+.+.++.+.+.. ++++++|++++|.+.. +..+.+.+||.+.+.
T Consensus 160 ~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~-----------------~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 160 PVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDP-----------------RLMQFALDRLRYTVP 210 (232)
T ss_pred CccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCH-----------------HHHHHHHHHHHHHcc
Confidence 99999999888877653 3788999999999874 445556666665553
No 65
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.74 E-value=1.6e-17 Score=117.52 Aligned_cols=165 Identities=21% Similarity=0.282 Sum_probs=114.5
Q ss_pred ccCCceEEEEEeccCCCCCCCCCCCchHH--HHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcc--ccccceE
Q 030264 4 KALDAVEVVTFDYPYIAGGKRKAPPKAEK--LVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE--DIAASAV 79 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~~~~~~~ 79 (180)
+.++||.|+++++||++ |.....+...+ ..+|+...+++++...+..++..+|+|+||.+...+..+. ...+.+.
T Consensus 100 ~~~rg~~~Vv~~~Rgcs-~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa 178 (345)
T COG0429 100 LSRRGWLVVVFHFRGCS-GEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAA 178 (345)
T ss_pred HHhcCCeEEEEeccccc-CCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCccccee
Confidence 35789999999999996 33322333322 3689999999999988999999999999995555555442 2344555
Q ss_pred EEeccCCCC------CCc--------------------------------------------------------------
Q 030264 80 LCLGYPLKG------MNG-------------------------------------------------------------- 91 (180)
Q Consensus 80 ~~~~~~~~~------~~~-------------------------------------------------------------- 91 (180)
+.++.|+.- ++.
T Consensus 179 ~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~ 258 (345)
T COG0429 179 VAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAE 258 (345)
T ss_pred eeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHH
Confidence 544444220 000
Q ss_pred -----ccchhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCc-cccccccccccccchhHHHHHH
Q 030264 92 -----AVRDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHS-FKIGKKHLQTMGTTQDEMEGLA 165 (180)
Q Consensus 92 -----~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~~~~~~~~~ 165 (180)
......+++|++|+|+|++.+||+++++...+.....++++.+.+.+.+||. |..... . ...-+.
T Consensus 259 dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~-------~--~~~~W~ 329 (345)
T COG0429 259 DYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKL-------L--HPQMWL 329 (345)
T ss_pred HHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCcc-------c--cchhhH
Confidence 0011357889999999999999999998887776656667999999999998 443211 1 112478
Q ss_pred HHHHHHHHHHhhc
Q 030264 166 VQAIAAFISKSLG 178 (180)
Q Consensus 166 ~~~i~~fl~~~~~ 178 (180)
.+.+.+|++..++
T Consensus 330 ~~ri~~~l~~~~~ 342 (345)
T COG0429 330 EQRILDWLDPFLE 342 (345)
T ss_pred HHHHHHHHHHHHh
Confidence 8899999987754
No 66
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.74 E-value=1.8e-16 Score=107.97 Aligned_cols=151 Identities=21% Similarity=0.299 Sum_probs=104.0
Q ss_pred ceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcc---ccccceEEEecc
Q 030264 8 AVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE---DIAASAVLCLGY 84 (180)
Q Consensus 8 g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~---~~~~~~~~~~~~ 84 (180)
...++++++||+ +.+...+...++..-+..+...+...+..+++.++||||||.+|..+|.+. .....+++++++
T Consensus 33 ~iel~avqlPGR--~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~ 110 (244)
T COG3208 33 DIELLAVQLPGR--GDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGC 110 (244)
T ss_pred hhheeeecCCCc--ccccCCcccccHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecC
Confidence 478899999998 444344333333222333333333234566999999999999999999872 223667777664
Q ss_pred CCCCCCc--c-----------------------c-------------ch----------hhhccCCCcEEEEeecCCCCC
Q 030264 85 PLKGMNG--A-----------------------V-------------RD----------ELLLQITVPIMFVQGSKDGLC 116 (180)
Q Consensus 85 ~~~~~~~--~-----------------------~-------------~~----------~~~~~~~~P~l~i~g~~D~~~ 116 (180)
.-+.... . + +. ..-..++||+.++.|++|..+
T Consensus 111 ~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~v 190 (244)
T COG3208 111 RAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEV 190 (244)
T ss_pred CCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhc
Confidence 3221100 0 0 00 112467899999999999999
Q ss_pred ChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHH
Q 030264 117 PLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFIS 174 (180)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 174 (180)
..+....|.+..+...++++|+| ||++.. +..+++...+.+.+.
T Consensus 191 s~~~~~~W~~~t~~~f~l~~fdG-gHFfl~-------------~~~~~v~~~i~~~l~ 234 (244)
T COG3208 191 SRDELGAWREHTKGDFTLRVFDG-GHFFLN-------------QQREEVLARLEQHLA 234 (244)
T ss_pred cHHHHHHHHHhhcCCceEEEecC-cceehh-------------hhHHHHHHHHHHHhh
Confidence 99999999999887799999986 899987 666777777777775
No 67
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.74 E-value=5.6e-17 Score=138.37 Aligned_cols=156 Identities=17% Similarity=0.207 Sum_probs=109.9
Q ss_pred CCceEEEEEeccCCCCCCCCCCC-------chHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccce
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPP-------KAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASA 78 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~ 78 (180)
.++|+|+++|+||++ .+.... ......+++.+.+..+......++++++||||||.+++.++.++|.++++
T Consensus 1395 ~~~~rVi~~Dl~G~G--~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~ 1472 (1655)
T PLN02980 1395 SGSARCISIDLPGHG--GSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEG 1472 (1655)
T ss_pred hCCCEEEEEcCCCCC--CCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCE
Confidence 457999999999994 332211 11112344444444444445567999999999999999999999999999
Q ss_pred EEEeccC-CCCC-------------------------------C-c---cc-----------------------------
Q 030264 79 VLCLGYP-LKGM-------------------------------N-G---AV----------------------------- 93 (180)
Q Consensus 79 ~~~~~~~-~~~~-------------------------------~-~---~~----------------------------- 93 (180)
+++++.. .... . . ..
T Consensus 1473 lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1552 (1655)
T PLN02980 1473 AVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDL 1552 (1655)
T ss_pred EEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHh
Confidence 9987632 1000 0 0 00
Q ss_pred -------chhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccC-----------CcEEEEEcCCCCccccccccccccc
Q 030264 94 -------RDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKS-----------LSELHLIDGGDHSFKIGKKHLQTMG 155 (180)
Q Consensus 94 -------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~H~~~~~~~~~~~~~ 155 (180)
..+.+.++++|+|+++|++|..++ ....++.+.++. .+++++++++||..+.
T Consensus 1553 ~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~l--------- 1622 (1655)
T PLN02980 1553 SIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHL--------- 1622 (1655)
T ss_pred hhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHH---------
Confidence 001356678999999999999775 556666666553 1589999999999888
Q ss_pred cchhHHHHHHHHHHHHHHHHhh
Q 030264 156 TTQDEMEGLAVQAIAAFISKSL 177 (180)
Q Consensus 156 ~~~~~~~~~~~~~i~~fl~~~~ 177 (180)
+.++.+++.+.+||++.-
T Consensus 1623 ----E~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1623 ----ENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred ----HCHHHHHHHHHHHHHhcc
Confidence 778999999999998753
No 68
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.73 E-value=5.8e-16 Score=118.66 Aligned_cols=171 Identities=12% Similarity=0.089 Sum_probs=117.0
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCchH-HHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHH----Hhhcc-ccccce
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPKAE-KLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCM----VACKE-DIAASA 78 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~----~a~~~-~~~~~~ 78 (180)
+++||+|+++|++|+ |.+....... ...+.+.++++.+.+..+.++++++||||||.++.. +++.. +.++++
T Consensus 217 ~~qGf~V~~iDwrgp--g~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~s 294 (532)
T TIGR01838 217 VEQGHTVFVISWRNP--DASQADKTFDDYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKS 294 (532)
T ss_pred HHCCcEEEEEECCCC--CcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccce
Confidence 468999999999998 4333322233 334568888888888778889999999999998633 34444 668999
Q ss_pred EEEeccCCCCC-Ccc---------c-------------------------------------------------------
Q 030264 79 VLCLGYPLKGM-NGA---------V------------------------------------------------------- 93 (180)
Q Consensus 79 ~~~~~~~~~~~-~~~---------~------------------------------------------------------- 93 (180)
+++++.++.-. .+. .
T Consensus 295 lvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~ 374 (532)
T TIGR01838 295 ATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNS 374 (532)
T ss_pred EEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhc
Confidence 99877653300 000 0
Q ss_pred --------------------------------chhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCC
Q 030264 94 --------------------------------RDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGD 141 (180)
Q Consensus 94 --------------------------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (180)
....+..+++|+|+++|++|.++|.+.+..+.+.++ ..+..+++++|
T Consensus 375 D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~-~~~~~vL~~sG 453 (532)
T TIGR01838 375 DSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLG-GPKTFVLGESG 453 (532)
T ss_pred cCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCC-CCEEEEECCCC
Confidence 001466789999999999999999999999888877 57778899999
Q ss_pred Cccccccccccc--------cccchhHH--------HHHHHHHHHHHHHHhhc
Q 030264 142 HSFKIGKKHLQT--------MGTTQDEM--------EGLAVQAIAAFISKSLG 178 (180)
Q Consensus 142 H~~~~~~~~~~~--------~~~~~~~~--------~~~~~~~i~~fl~~~~~ 178 (180)
|..+...+..++ ....+++. +--.|....+||.++..
T Consensus 454 Hi~~ienPp~~~k~~y~~~~~~~~~~~~w~~~a~~~~gSWW~~w~~Wl~~~~g 506 (532)
T TIGR01838 454 HIAGVVNPPSKNKYGHWTNAALPADPEVWLAGATEHPGSWWPDWAAWLAGHSG 506 (532)
T ss_pred CchHhhCCCCCCCCceeeCCCCCCCHHHHHhcCCcCCCCchHhHHHHHHHhCC
Confidence 997754433322 11111221 12246777888877653
No 69
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.72 E-value=2.8e-16 Score=108.23 Aligned_cols=144 Identities=17% Similarity=0.248 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHhhC--CCCcEEEEeeChhHHHHHHHhhccccccceEEEeccCCCCCC----------------------
Q 030264 35 EFHTDVVKGAVAKF--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMN---------------------- 90 (180)
Q Consensus 35 ~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~---------------------- 90 (180)
+.+.+++++++++- ..++|+|+|.|.||.+|+.+|+..+ .|+++|+++++.....
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~ 82 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKF 82 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG-
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhhc
Confidence 56788899998862 3459999999999999999999987 8999998664321000
Q ss_pred -----ccc---------ch-------hhhccCCCcEEEEeecCCCCCChHHHH-HHHHHccC-----CcEEEEEcCCCCc
Q 030264 91 -----GAV---------RD-------ELLLQITVPIMFVQGSKDGLCPLDKLE-AVRKKMKS-----LSELHLIDGGDHS 143 (180)
Q Consensus 91 -----~~~---------~~-------~~~~~~~~P~l~i~g~~D~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~H~ 143 (180)
... .. -.+.++++|+|++.|++|...|..... .+.+.+.. +.+.+.|+++||.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~ 162 (213)
T PF08840_consen 83 SWNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHL 162 (213)
T ss_dssp EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S-
T ss_pred eecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCce
Confidence 000 00 025568899999999999999886554 33343432 2688899999999
Q ss_pred cccccccccc---------------cccchhHHHHHHHHHHHHHHHHhhcC
Q 030264 144 FKIGKKHLQT---------------MGTTQDEMEGLAVQAIAAFISKSLGE 179 (180)
Q Consensus 144 ~~~~~~~~~~---------------~~~~~~~~~~~~~~~i~~fl~~~~~~ 179 (180)
+....-+... ....+..+.++.|..+++||+++|.+
T Consensus 163 i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~~ 213 (213)
T PF08840_consen 163 IEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLGQ 213 (213)
T ss_dssp --STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH---
T ss_pred ecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 7654321111 12234556888999999999999864
No 70
>PLN02442 S-formylglutathione hydrolase
Probab=99.72 E-value=1.3e-15 Score=109.42 Aligned_cols=130 Identities=15% Similarity=0.120 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEeccCCCCCCc----------------cc----
Q 030264 34 VEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNG----------------AV---- 93 (180)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~----------------~~---- 93 (180)
.+++...+.......+.++++++||||||.+++.++.++|..++++++++........ .+
T Consensus 126 ~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d 205 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCPWGQKAFTNYLGSDKADWEEYD 205 (283)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCchhhHHHHHHcCCChhhHHHcC
Confidence 4455555555444456678999999999999999999999999988887743221000 00
Q ss_pred ---chhhhccCCCcEEEEeecCCCCCChH-HHHHHHHH---ccCCcEEEEEcCCCCccccccccccccccchhHHHHHHH
Q 030264 94 ---RDELLLQITVPIMFVQGSKDGLCPLD-KLEAVRKK---MKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAV 166 (180)
Q Consensus 94 ---~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~ 166 (180)
....+...++|+++++|++|+.++.. ..+.+.+. ...+++++++||.+|.|.. ...++
T Consensus 206 ~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~~---------------~~~~i 270 (283)
T PLN02442 206 ATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYFF---------------IATFI 270 (283)
T ss_pred hhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHHH---------------HHHHH
Confidence 01123346789999999999998863 23444433 3444899999999999764 34455
Q ss_pred HHHHHHHHHhhc
Q 030264 167 QAIAAFISKSLG 178 (180)
Q Consensus 167 ~~i~~fl~~~~~ 178 (180)
...+.|..++++
T Consensus 271 ~~~~~~~~~~~~ 282 (283)
T PLN02442 271 DDHINHHAQALK 282 (283)
T ss_pred HHHHHHHHHHhc
Confidence 555666666553
No 71
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.71 E-value=1.2e-15 Score=109.40 Aligned_cols=114 Identities=18% Similarity=0.142 Sum_probs=80.6
Q ss_pred CCCcEEEEeeChhHHHHHHHhhccccccceEEEeccCCCCCC----------------ccc----chhhhc--cCCCcEE
Q 030264 49 PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMN----------------GAV----RDELLL--QITVPIM 106 (180)
Q Consensus 49 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~----------------~~~----~~~~~~--~~~~P~l 106 (180)
+.++++++||||||.+++.++.++|..++++++++....... ... ...... ....|++
T Consensus 136 ~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~pll 215 (275)
T TIGR02821 136 DGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRCPWGQKAFSAYLGADEAAWRSYDASLLVADGGRHSTIL 215 (275)
T ss_pred CCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccCcchHHHHHHHhcccccchhhcchHHHHhhcccCCCee
Confidence 446899999999999999999999999999988663321100 000 001111 2457899
Q ss_pred EEeecCCCCCCh-HHHHHHHHHc---cCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHhh
Q 030264 107 FVQGSKDGLCPL-DKLEAVRKKM---KSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSL 177 (180)
Q Consensus 107 ~i~g~~D~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 177 (180)
+.+|+.|+.++. .....+.+.+ ..++++.++||.+|.|.. ....+...++|+.+++
T Consensus 216 i~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~---------------~~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 216 IDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYF---------------IASFIADHLRHHAERL 275 (275)
T ss_pred EeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchh---------------HHHhHHHHHHHHHhhC
Confidence 999999999997 3444444443 344899999999999875 5677788888887653
No 72
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.68 E-value=6.5e-16 Score=116.39 Aligned_cols=169 Identities=41% Similarity=0.717 Sum_probs=129.2
Q ss_pred eEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcc-ccccceEEEeccCCC
Q 030264 9 VEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE-DIAASAVLCLGYPLK 87 (180)
Q Consensus 9 ~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~~~~~~~~~~~~~~~ 87 (180)
..|..||++...+|. .-....+.........+.++..+++..+|+|+|+|||+.++++....+ ...++++||++||+.
T Consensus 209 vev~tfdl~n~igG~-nI~h~ae~~vSf~r~kvlei~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~ 287 (784)
T KOG3253|consen 209 VEVPTFDLNNPIGGA-NIKHAAEYSVSFDRYKVLEITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLD 287 (784)
T ss_pred eeeccccccCCCCCc-chHHHHHHHHHHhhhhhhhhhccCCCCceEEEecccCceeeEEeccccCCceEEEEEEeccccc
Confidence 456678887754231 122233333444444455666678888999999999988888877663 356999999999998
Q ss_pred CCCc--ccchhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHH
Q 030264 88 GMNG--AVRDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLA 165 (180)
Q Consensus 88 ~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~ 165 (180)
..++ ..+++.+-.+..|+|||.|.+|..++++..+++.+++....+++++.+++|.+-.........+.++.+.-...
T Consensus 288 ~vdgprgirDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk~k~esegltqseVd~~i 367 (784)
T KOG3253|consen 288 TVDGPRGIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPKRKVESEGLTQSEVDSAI 367 (784)
T ss_pred CCCcccCCcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCccccccccccHHHHHHHH
Confidence 6655 78899999999999999999999999999999999999889999999999998876654555666666666666
Q ss_pred HHHHHHHHHHhhc
Q 030264 166 VQAIAAFISKSLG 178 (180)
Q Consensus 166 ~~~i~~fl~~~~~ 178 (180)
.+.|.+|....++
T Consensus 368 ~~aI~efvt~~l~ 380 (784)
T KOG3253|consen 368 AQAIKEFVTIALN 380 (784)
T ss_pred HHHHHHHHHHhhc
Confidence 6777777765543
No 73
>PRK05855 short chain dehydrogenase; Validated
Probab=99.67 E-value=1.3e-15 Score=119.58 Aligned_cols=62 Identities=13% Similarity=0.156 Sum_probs=51.7
Q ss_pred cCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHh
Q 030264 100 QITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKS 176 (180)
Q Consensus 100 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 176 (180)
.+++|+++++|++|++++++....+.+.++ ..++++++ +||+.+. +.++.+.+.+.+|+.+.
T Consensus 231 ~~~~P~lii~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~-~gH~~~~-------------e~p~~~~~~i~~fl~~~ 292 (582)
T PRK05855 231 YTDVPVQLIVPTGDPYVRPALYDDLSRWVP-RLWRREIK-AGHWLPM-------------SHPQVLAAAVAEFVDAV 292 (582)
T ss_pred CccCceEEEEeCCCcccCHHHhccccccCC-cceEEEcc-CCCcchh-------------hChhHHHHHHHHHHHhc
Confidence 378999999999999999988888876655 47777776 5899887 66889999999999764
No 74
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.66 E-value=4.3e-15 Score=105.37 Aligned_cols=156 Identities=19% Similarity=0.238 Sum_probs=116.5
Q ss_pred ceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhH-HHHHHHhhccccccceEEEecc-C
Q 030264 8 AVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGS-RVSCMVACKEDIAASAVLCLGY-P 85 (180)
Q Consensus 8 g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg-~~a~~~a~~~~~~~~~~~~~~~-~ 85 (180)
|-.|+++|.|.++............+.+|+...++.........++.++|||||| .+++..+...|..+..+++... |
T Consensus 80 ~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP 159 (315)
T KOG2382|consen 80 GRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISP 159 (315)
T ss_pred cCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCC
Confidence 4589999999995333334455777788888888888754445589999999999 7777777778888888887552 2
Q ss_pred CC-CC---------------Ccc---c---------------------------c-------------------------
Q 030264 86 LK-GM---------------NGA---V---------------------------R------------------------- 94 (180)
Q Consensus 86 ~~-~~---------------~~~---~---------------------------~------------------------- 94 (180)
.. +. +.. . +
T Consensus 160 ~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~ 239 (315)
T KOG2382|consen 160 GGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYE 239 (315)
T ss_pred ccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHH
Confidence 11 00 000 0 0
Q ss_pred ----hhhh--ccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHH
Q 030264 95 ----DELL--LQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQA 168 (180)
Q Consensus 95 ----~~~~--~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (180)
...+ .....|+|+++|.++.+++.+...++.+.++ ++++++++++||+.+. +.|+.++..
T Consensus 240 ~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp-~~e~~~ld~aGHwVh~-------------E~P~~~~~~ 305 (315)
T KOG2382|consen 240 ILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFP-NVEVHELDEAGHWVHL-------------EKPEEFIES 305 (315)
T ss_pred hhcccccccccccccceeEEecCCCCCcChhHHHHHHHhcc-chheeecccCCceeec-------------CCHHHHHHH
Confidence 0011 3456899999999999999998888887777 5999999999999998 778999999
Q ss_pred HHHHHHHhh
Q 030264 169 IAAFISKSL 177 (180)
Q Consensus 169 i~~fl~~~~ 177 (180)
+.+|+.++.
T Consensus 306 i~~Fl~~~~ 314 (315)
T KOG2382|consen 306 ISEFLEEPE 314 (315)
T ss_pred HHHHhcccC
Confidence 999987653
No 75
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.66 E-value=1.6e-15 Score=111.62 Aligned_cols=154 Identities=19% Similarity=0.250 Sum_probs=95.7
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhh--CCCCcEEEEeeChhHHHHHHHhhccccccceEEEe
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK--FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCL 82 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~ 82 (180)
+.+|++++++|.||.+... ..+.. .+.......+++++... .+..+|+++|.|+||++|.++|..++.+++++++.
T Consensus 215 ~~rGiA~LtvDmPG~G~s~-~~~l~-~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~ 292 (411)
T PF06500_consen 215 APRGIAMLTVDMPGQGESP-KWPLT-QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVAL 292 (411)
T ss_dssp HHCT-EEEEE--TTSGGGT-TT-S--S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEE
T ss_pred HhCCCEEEEEccCCCcccc-cCCCC-cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeee
Confidence 5689999999999984321 11111 11223445566666553 34459999999999999999998888899999998
Q ss_pred ccCCCCC----------Cccc----------------------------chhhh--ccCCCcEEEEeecCCCCCChHHHH
Q 030264 83 GYPLKGM----------NGAV----------------------------RDELL--LQITVPIMFVQGSKDGLCPLDKLE 122 (180)
Q Consensus 83 ~~~~~~~----------~~~~----------------------------~~~~~--~~~~~P~l~i~g~~D~~~~~~~~~ 122 (180)
+.+.+.. +..+ ....+ .+.++|+|.+.+++|+++|.++..
T Consensus 293 Ga~vh~~ft~~~~~~~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~ 372 (411)
T PF06500_consen 293 GAPVHHFFTDPEWQQRVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSR 372 (411)
T ss_dssp S---SCGGH-HHHHTTS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHH
T ss_pred CchHhhhhccHHHHhcCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHH
Confidence 8664421 1100 00123 556789999999999999999988
Q ss_pred HHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHhh
Q 030264 123 AVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSL 177 (180)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 177 (180)
-+... ....+...++... .+ ...++....+.+||++.+
T Consensus 373 lia~~-s~~gk~~~~~~~~--~~--------------~gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 373 LIAES-STDGKALRIPSKP--LH--------------MGYPQALDEIYKWLEDKL 410 (411)
T ss_dssp HHHHT-BTT-EEEEE-SSS--HH--------------HHHHHHHHHHHHHHHHHH
T ss_pred HHHhc-CCCCceeecCCCc--cc--------------cchHHHHHHHHHHHHHhc
Confidence 77655 3346677776543 22 334688999999998865
No 76
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.66 E-value=5.6e-15 Score=110.12 Aligned_cols=156 Identities=15% Similarity=0.078 Sum_probs=112.0
Q ss_pred CceEEEEEeccCCCC------CCCCC----CC-------chH-HHHHHHHHHHHHHHhhCCCCcEE-EEeeChhHHHHHH
Q 030264 7 DAVEVVTFDYPYIAG------GKRKA----PP-------KAE-KLVEFHTDVVKGAVAKFPGHPLI-LAGKSMGSRVSCM 67 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~------g~~~~----~~-------~~~-~~~~~~~~~~~~~~~~~~~~~i~-l~G~S~Gg~~a~~ 67 (180)
.-|-|+++|..|.+. |+..+ +. .+. ....+..+.+..+.+.+..+++. ++||||||.+++.
T Consensus 98 ~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~ 177 (389)
T PRK06765 98 NKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQE 177 (389)
T ss_pred CceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHH
Confidence 358999999998531 11110 00 111 23556666666666667777886 9999999999999
Q ss_pred HhhccccccceEEEeccCCC-------------------C------------CC-c---------------------c-c
Q 030264 68 VACKEDIAASAVLCLGYPLK-------------------G------------MN-G---------------------A-V 93 (180)
Q Consensus 68 ~a~~~~~~~~~~~~~~~~~~-------------------~------------~~-~---------------------~-~ 93 (180)
++.++|++++++++++.... . .+ . . .
T Consensus 178 ~a~~~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~ 257 (389)
T PRK06765 178 WAVHYPHMVERMIGVIGNPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFP 257 (389)
T ss_pred HHHHChHhhheEEEEecCCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcC
Confidence 99999999999998752110 0 00 0 0 0
Q ss_pred c---------------------------------------------------------hhhhccCCCcEEEEeecCCCCC
Q 030264 94 R---------------------------------------------------------DELLLQITVPIMFVQGSKDGLC 116 (180)
Q Consensus 94 ~---------------------------------------------------------~~~~~~~~~P~l~i~g~~D~~~ 116 (180)
+ .+.+.++++|+|+|+|+.|.++
T Consensus 258 r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~ 337 (389)
T PRK06765 258 RNASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQ 337 (389)
T ss_pred cCccccccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCC
Confidence 0 0123467899999999999999
Q ss_pred ChHHHHHHHHHccC---CcEEEEEcC-CCCccccccccccccccchhHHHHHHHHHHHHHHHH
Q 030264 117 PLDKLEAVRKKMKS---LSELHLIDG-GDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISK 175 (180)
Q Consensus 117 ~~~~~~~~~~~~~~---~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 175 (180)
|++..+++.+.++. +++++++++ .||..+. +.++++.+.+.+|+++
T Consensus 338 p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~l-------------e~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 338 PPRYNYKMVDILQKQGKYAEVYEIESINGHMAGV-------------FDIHLFEKKIYEFLNR 387 (389)
T ss_pred CHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhh-------------cCHHHHHHHHHHHHcc
Confidence 99999998888863 589999985 8999777 6678999999999975
No 77
>PLN00021 chlorophyllase
Probab=99.65 E-value=2.3e-14 Score=103.95 Aligned_cols=168 Identities=18% Similarity=0.210 Sum_probs=107.9
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhh----------CCCCcEEEEeeChhHHHHHHHhhccc-
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK----------FPGHPLILAGKSMGSRVSCMVACKED- 73 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~i~l~G~S~Gg~~a~~~a~~~~- 73 (180)
+++||.|+++|+++++ +. .... ..++..++++++... .+.++++++|||+||.+++.++..++
T Consensus 76 as~G~~VvapD~~g~~-~~-~~~~----~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~ 149 (313)
T PLN00021 76 ASHGFIVVAPQLYTLA-GP-DGTD----EIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAA 149 (313)
T ss_pred HhCCCEEEEecCCCcC-CC-Cchh----hHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccc
Confidence 5679999999999863 21 1111 123344444444431 23358999999999999999998865
Q ss_pred ----cccceEEEeccCCCCCC-------cccc-hhhhccCCCcEEEEeecCCC-----C----CCh-HHHHHHHHHccCC
Q 030264 74 ----IAASAVLCLGYPLKGMN-------GAVR-DELLLQITVPIMFVQGSKDG-----L----CPL-DKLEAVRKKMKSL 131 (180)
Q Consensus 74 ----~~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~P~l~i~g~~D~-----~----~~~-~~~~~~~~~~~~~ 131 (180)
.++++++.+. |..+.. .... .....++..|+|++.+..|. . .|. .+..++++.++.+
T Consensus 150 ~~~~~~v~ali~ld-Pv~g~~~~~~~~p~il~~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~ 228 (313)
T PLN00021 150 VSLPLKFSALIGLD-PVDGTSKGKQTPPPVLTYAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAP 228 (313)
T ss_pred cccccceeeEEeec-cccccccccCCCCcccccCcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCC
Confidence 3578888776 322111 0000 11233477999999998663 2 223 3446788888777
Q ss_pred cEEEEEcCCCCccccccc----------cccccccchhHHHHHHHHHHHHHHHHhhcC
Q 030264 132 SELHLIDGGDHSFKIGKK----------HLQTMGTTQDEMEGLAVQAIAAFISKSLGE 179 (180)
Q Consensus 132 ~~~~~~~~~~H~~~~~~~----------~~~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 179 (180)
+...+.++++|.-..+.. ..+-.+.......+.+...+..||+..+.+
T Consensus 229 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~ 286 (313)
T PLN00021 229 AVHFVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEG 286 (313)
T ss_pred eeeeeecCCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcC
Confidence 888899999999443322 122234456677778888899999988754
No 78
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.61 E-value=4.8e-14 Score=112.88 Aligned_cols=159 Identities=13% Similarity=0.052 Sum_probs=111.9
Q ss_pred cCCceEEEEEeccCCCCCCCCCC--CchHHHHHHHHHHHHHHHhh----------------CCCCcEEEEeeChhHHHHH
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAP--PKAEKLVEFHTDVVKGAVAK----------------FPGHPLILAGKSMGSRVSC 66 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~----------------~~~~~i~l~G~S~Gg~~a~ 66 (180)
+.+||.|+.+|.||.+ .|.+. .....-.+|..++++|+... +...+|+++|.|+||.+++
T Consensus 276 ~~rGYaVV~~D~RGtg--~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~ 353 (767)
T PRK05371 276 LPRGFAVVYVSGIGTR--GSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPN 353 (767)
T ss_pred HhCCeEEEEEcCCCCC--CCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHH
Confidence 5789999999999984 33222 21234467888899999742 3356999999999999999
Q ss_pred HHhhccccccceEEEeccCC-------C--------CC-----C-------------cc---------------------
Q 030264 67 MVACKEDIAASAVLCLGYPL-------K--------GM-----N-------------GA--------------------- 92 (180)
Q Consensus 67 ~~a~~~~~~~~~~~~~~~~~-------~--------~~-----~-------------~~--------------------- 92 (180)
.+|...++.++++|..+... . +. . ..
T Consensus 354 ~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (767)
T PRK05371 354 AVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAELTAAQDR 433 (767)
T ss_pred HHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhhhhhhhh
Confidence 99998888888888744110 0 00 0 00
Q ss_pred ------------cchhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccC---CcEEEEEcCCCCccccccccccccccc
Q 030264 93 ------------VRDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKS---LSELHLIDGGDHSFKIGKKHLQTMGTT 157 (180)
Q Consensus 93 ------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~~~~~~~~~~~ 157 (180)
.....+.++++|+|+++|..|..+++..+.++++.+.. +.++.+.++ +|.....
T Consensus 434 ~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g-~H~~~~~---------- 502 (767)
T PRK05371 434 KTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQG-GHVYPNN---------- 502 (767)
T ss_pred cCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeCC-CccCCCc----------
Confidence 00023457899999999999999999888888887753 366766654 7864431
Q ss_pred hhHHHHHHHHHHHHHHHHhhc
Q 030264 158 QDEMEGLAVQAIAAFISKSLG 178 (180)
Q Consensus 158 ~~~~~~~~~~~i~~fl~~~~~ 178 (180)
.....+.+.+.+|++++|+
T Consensus 503 --~~~~d~~e~~~~Wfd~~Lk 521 (767)
T PRK05371 503 --WQSIDFRDTMNAWFTHKLL 521 (767)
T ss_pred --hhHHHHHHHHHHHHHhccc
Confidence 2245677888999988875
No 79
>PLN02872 triacylglycerol lipase
Probab=99.61 E-value=8.6e-15 Score=109.18 Aligned_cols=68 Identities=19% Similarity=0.266 Sum_probs=57.0
Q ss_pred hccC--CCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCc---cccccccccccccchhHHHHHHHHHHHHH
Q 030264 98 LLQI--TVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHS---FKIGKKHLQTMGTTQDEMEGLAVQAIAAF 172 (180)
Q Consensus 98 ~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~f 172 (180)
+.++ ++|+++++|++|..++++.+.++.+.++...+++.+++.+|. +.. +.++.+++.+++|
T Consensus 319 l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~-------------eape~V~~~Il~f 385 (395)
T PLN02872 319 LSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLST-------------SAKEDVYNHMIQF 385 (395)
T ss_pred cccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCc-------------chHHHHHHHHHHH
Confidence 4566 579999999999999999999999998855788899999996 233 6678999999999
Q ss_pred HHHhhc
Q 030264 173 ISKSLG 178 (180)
Q Consensus 173 l~~~~~ 178 (180)
+++...
T Consensus 386 L~~~~~ 391 (395)
T PLN02872 386 FRSLGK 391 (395)
T ss_pred HHHhhh
Confidence 987653
No 80
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.61 E-value=3e-14 Score=108.67 Aligned_cols=136 Identities=14% Similarity=0.120 Sum_probs=106.4
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHH----Hhhcccc-ccceE
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCM----VACKEDI-AASAV 79 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~----~a~~~~~-~~~~~ 79 (180)
.++||.|+.+||++- +.....-..++.++.+.++++.+++..+.++|.++|+|+||.++.. +++.+++ +|+.+
T Consensus 244 v~qG~~VflIsW~nP--~~~~r~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sl 321 (560)
T TIGR01839 244 LKNQLQVFIISWRNP--DKAHREWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSL 321 (560)
T ss_pred HHcCCeEEEEeCCCC--ChhhcCCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeE
Confidence 568999999999985 3333444556666788899999988878889999999999999997 6677664 79999
Q ss_pred EEeccCCCCCC-c---cc--------------------------------------------------------------
Q 030264 80 LCLGYPLKGMN-G---AV-------------------------------------------------------------- 93 (180)
Q Consensus 80 ~~~~~~~~~~~-~---~~-------------------------------------------------------------- 93 (180)
++++.|+.... + .+
T Consensus 322 tllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D 401 (560)
T TIGR01839 322 TYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNND 401 (560)
T ss_pred EeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCc
Confidence 98776644110 0 00
Q ss_pred -------------------------------chhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCC
Q 030264 94 -------------------------------RDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDH 142 (180)
Q Consensus 94 -------------------------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 142 (180)
+.-.+++|++|++++.|+.|.++|.+.+.+..+.+.+.+++++.+ +||
T Consensus 402 ~t~lPg~~~~e~l~ly~~N~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~-gGH 480 (560)
T TIGR01839 402 TTRLPAAFHGDLLDMFKSNPLTRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLSN-SGH 480 (560)
T ss_pred CccchHHHHHHHHHHHhcCCCCCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEecC-CCc
Confidence 001467899999999999999999999999999988778888876 578
Q ss_pred c
Q 030264 143 S 143 (180)
Q Consensus 143 ~ 143 (180)
.
T Consensus 481 I 481 (560)
T TIGR01839 481 I 481 (560)
T ss_pred c
Confidence 7
No 81
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.60 E-value=6.6e-14 Score=115.77 Aligned_cols=159 Identities=14% Similarity=0.169 Sum_probs=108.6
Q ss_pred cCCceEEEEEeccCCCCCCCCC--CCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcc-ccccceEEE
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKA--PPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE-DIAASAVLC 81 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~~~~~~~~~ 81 (180)
+++||+|+++|| |.+ +.... .....+....+.+.++.++.. ..+++.++||||||.+++.+++.+ +.+++++++
T Consensus 96 ~~~g~~v~~~d~-G~~-~~~~~~~~~~l~~~i~~l~~~l~~v~~~-~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl 172 (994)
T PRK07868 96 HRAGLDPWVIDF-GSP-DKVEGGMERNLADHVVALSEAIDTVKDV-TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVT 172 (994)
T ss_pred HHCCCEEEEEcC-CCC-ChhHcCccCCHHHHHHHHHHHHHHHHHh-hCCceEEEEEChhHHHHHHHHHhcCCCccceEEE
Confidence 467999999997 322 11111 122233334445555555443 345899999999999999988754 457999988
Q ss_pred eccCCC-------C------CC----------------c-----------------------------------------
Q 030264 82 LGYPLK-------G------MN----------------G----------------------------------------- 91 (180)
Q Consensus 82 ~~~~~~-------~------~~----------------~----------------------------------------- 91 (180)
++.|.. . .. .
T Consensus 173 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~ 252 (994)
T PRK07868 173 FGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRF 252 (994)
T ss_pred EecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhH
Confidence 665421 0 00 0
Q ss_pred ----cc-ch-----------------------------hhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEE-EE
Q 030264 92 ----AV-RD-----------------------------ELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSEL-HL 136 (180)
Q Consensus 92 ----~~-~~-----------------------------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~-~~ 136 (180)
.+ .. ..++++++|+|+++|+.|+++|++.++.+.+.++ ..++ .+
T Consensus 253 ~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~-~a~~~~~ 331 (994)
T PRK07868 253 LESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAP-NAEVYES 331 (994)
T ss_pred HHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-CCeEEEE
Confidence 00 00 0256788999999999999999999999988876 4666 67
Q ss_pred EcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHhh
Q 030264 137 IDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSL 177 (180)
Q Consensus 137 ~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 177 (180)
++++||.-+.-.. ..++.+|..+.+||.++.
T Consensus 332 ~~~~GH~g~~~g~----------~a~~~~wp~i~~wl~~~~ 362 (994)
T PRK07868 332 LIRAGHFGLVVGS----------RAAQQTWPTVADWVKWLE 362 (994)
T ss_pred eCCCCCEeeeech----------hhhhhhChHHHHHHHHhc
Confidence 7899999544322 667899999999999864
No 82
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.60 E-value=3.4e-14 Score=104.08 Aligned_cols=142 Identities=20% Similarity=0.281 Sum_probs=99.6
Q ss_pred ccCCceEEEEEeccCCCCCCCCCCCchH--HHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccc--cccceE
Q 030264 4 KALDAVEVVTFDYPYIAGGKRKAPPKAE--KLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED--IAASAV 79 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~~~ 79 (180)
+.++||+|++++.||.+ |..-..+... ...+|+..+++.++..++..++..+|+||||.+.+.++.+.. ..+.+.
T Consensus 150 a~~~G~r~VVfN~RG~~-g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a 228 (409)
T KOG1838|consen 150 AQRKGYRVVVFNHRGLG-GSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAA 228 (409)
T ss_pred HHhCCcEEEEECCCCCC-CCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeE
Confidence 45789999999999975 4443344333 337999999999999999999999999999999999998832 234444
Q ss_pred EEeccCCCCC--Cc------------------------------------------------------------------
Q 030264 80 LCLGYPLKGM--NG------------------------------------------------------------------ 91 (180)
Q Consensus 80 ~~~~~~~~~~--~~------------------------------------------------------------------ 91 (180)
+.++.|+... ..
T Consensus 229 ~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deY 308 (409)
T KOG1838|consen 229 VAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEY 308 (409)
T ss_pred EEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHH
Confidence 4444443310 00
Q ss_pred ---ccchhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCc-ccc
Q 030264 92 ---AVRDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHS-FKI 146 (180)
Q Consensus 92 ---~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~ 146 (180)
......+.+|++|+|+|++.+|+++|.+..-.-...-++++-+.+-..+||. |..
T Consensus 309 Y~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfle 367 (409)
T KOG1838|consen 309 YKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLE 367 (409)
T ss_pred HhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeec
Confidence 0011357789999999999999999986544333232334666677778888 443
No 83
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.57 E-value=6e-14 Score=101.94 Aligned_cols=155 Identities=17% Similarity=0.155 Sum_probs=100.9
Q ss_pred ccCCceEEEEEeccCCCCCCCCC----------------C------CchHHHHHHHHHHHHHHHhh--CCCCcEEEEeeC
Q 030264 4 KALDAVEVVTFDYPYIAGGKRKA----------------P------PKAEKLVEFHTDVVKGAVAK--FPGHPLILAGKS 59 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~~----------------~------~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S 59 (180)
.++.||.|+.+|.||.+ +.+.. . ..+..+..|...+++.+.+. .+.++|++.|.|
T Consensus 105 ~a~~G~~vl~~d~rGqg-~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~S 183 (320)
T PF05448_consen 105 WAAAGYAVLAMDVRGQG-GRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGS 183 (320)
T ss_dssp HHHTT-EEEEE--TTTS-SSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEET
T ss_pred cccCCeEEEEecCCCCC-CCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeec
Confidence 46789999999999975 11100 0 11222356777788888774 445699999999
Q ss_pred hhHHHHHHHhhccccccceEEEeccCCCC--------C-Ccc-------cc---------------------hhhhccCC
Q 030264 60 MGSRVSCMVACKEDIAASAVLCLGYPLKG--------M-NGA-------VR---------------------DELLLQIT 102 (180)
Q Consensus 60 ~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~--------~-~~~-------~~---------------------~~~~~~~~ 102 (180)
+||.+++.+|+.. ++|++++...+.+.. . ... ++ ....+.|+
T Consensus 184 qGG~lal~~aaLd-~rv~~~~~~vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~ 262 (320)
T PF05448_consen 184 QGGGLALAAAALD-PRVKAAAADVPFLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIK 262 (320)
T ss_dssp HHHHHHHHHHHHS-ST-SEEEEESESSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--
T ss_pred CchHHHHHHHHhC-ccccEEEecCCCccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcC
Confidence 9999999999986 468877764422211 0 000 00 02356789
Q ss_pred CcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHh
Q 030264 103 VPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKS 176 (180)
Q Consensus 103 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 176 (180)
+|+++-.|=.|+++|+...-..++.++...++.+||..+|.... +.-.+..++||.++
T Consensus 263 ~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~----------------~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 263 CPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGP----------------EFQEDKQLNFLKEH 320 (320)
T ss_dssp SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTH----------------HHHHHHHHHHHHH-
T ss_pred CCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchh----------------hHHHHHHHHHHhcC
Confidence 99999999999999999999999999888999999999998653 33367788888764
No 84
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.57 E-value=2.1e-14 Score=95.82 Aligned_cols=140 Identities=18% Similarity=0.217 Sum_probs=100.2
Q ss_pred cCCceEEEEEeccCCCCCC-CCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEec
Q 030264 5 ALDAVEVVTFDYPYIAGGK-RKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLG 83 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~ 83 (180)
++.|+.++.||++|.+++. +..+.......+|+..+++.+... ...--+++|||-||.++..++++... +.-++.++
T Consensus 59 e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~-nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcs 136 (269)
T KOG4667|consen 59 EKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNS-NRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCS 136 (269)
T ss_pred HhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccC-ceEEEEEEeecCccHHHHHHHHhhcC-chheEEcc
Confidence 5679999999999985322 123344455568888888888663 22234689999999999999999754 55666544
Q ss_pred cCCCCCC--------------------------cccc----------------hhhhcc--CCCcEEEEeecCCCCCChH
Q 030264 84 YPLKGMN--------------------------GAVR----------------DELLLQ--ITVPIMFVQGSKDGLCPLD 119 (180)
Q Consensus 84 ~~~~~~~--------------------------~~~~----------------~~~~~~--~~~P~l~i~g~~D~~~~~~ 119 (180)
..+.... +.+. -+...+ .+||+|-+||..|.++|.+
T Consensus 137 GRydl~~~I~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve 216 (269)
T KOG4667|consen 137 GRYDLKNGINERLGEDYLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVE 216 (269)
T ss_pred cccchhcchhhhhcccHHHHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeech
Confidence 2211100 0000 012223 3699999999999999999
Q ss_pred HHHHHHHHccCCcEEEEEcCCCCccccc
Q 030264 120 KLEAVRKKMKSLSELHLIDGGDHSFKIG 147 (180)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~H~~~~~ 147 (180)
++.++++.++. .++.+++|++|.+...
T Consensus 217 ~AkefAk~i~n-H~L~iIEgADHnyt~~ 243 (269)
T KOG4667|consen 217 DAKEFAKIIPN-HKLEIIEGADHNYTGH 243 (269)
T ss_pred hHHHHHHhccC-CceEEecCCCcCccch
Confidence 99999999985 9999999999999863
No 85
>PRK10162 acetyl esterase; Provisional
Probab=99.56 E-value=3.2e-13 Score=98.70 Aligned_cols=156 Identities=16% Similarity=0.104 Sum_probs=101.4
Q ss_pred CceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHh---hC--CCCcEEEEeeChhHHHHHHHhhcc------ccc
Q 030264 7 DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVA---KF--PGHPLILAGKSMGSRVSCMVACKE------DIA 75 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~i~l~G~S~Gg~~a~~~a~~~------~~~ 75 (180)
.|+.|+.+|||... . ..+....+|..++++++.+ .+ +.++|+++|+|+||.+++.++... +..
T Consensus 111 ~g~~Vv~vdYrlap--e----~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~ 184 (318)
T PRK10162 111 SGCTVIGIDYTLSP--E----ARFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGK 184 (318)
T ss_pred cCCEEEEecCCCCC--C----CCCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccC
Confidence 59999999999752 1 1122234666666666644 23 345899999999999999998652 246
Q ss_pred cceEEEeccCCCCCCc-----------ccc------------------h--------hhhccCCCcEEEEeecCCCCCCh
Q 030264 76 ASAVLCLGYPLKGMNG-----------AVR------------------D--------ELLLQITVPIMFVQGSKDGLCPL 118 (180)
Q Consensus 76 ~~~~~~~~~~~~~~~~-----------~~~------------------~--------~~~~~~~~P~l~i~g~~D~~~~~ 118 (180)
+.+++++.+.+..... .+. . ..+..--.|+++++|+.|++.+
T Consensus 185 ~~~~vl~~p~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~d- 263 (318)
T PRK10162 185 VAGVLLWYGLYGLRDSVSRRLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLLD- 263 (318)
T ss_pred hhheEEECCccCCCCChhHHHhCCCccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCcC-
Confidence 7777776532211000 000 0 0011122599999999999875
Q ss_pred HHHHHHHHHccC---CcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHhhc
Q 030264 119 DKLEAVRKKMKS---LSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSLG 178 (180)
Q Consensus 119 ~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 178 (180)
+...+.+++.. .+++++++|..|.|..... ..+..+++++.+.+||+++++
T Consensus 264 -e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~--------~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 264 -DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSR--------MMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred -hHHHHHHHHHHcCCCEEEEEECCCceehhhccC--------chHHHHHHHHHHHHHHHHHhc
Confidence 55556655543 3899999999999865221 124466789999999998775
No 86
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.55 E-value=1.2e-13 Score=95.32 Aligned_cols=124 Identities=12% Similarity=0.075 Sum_probs=83.2
Q ss_pred CCceEEEEEeccCCCCCCCCC----C---CchHHHHHHHHHHHHHHHhhCC--CCcEEEEeeChhHHHHHHHhhcccccc
Q 030264 6 LDAVEVVTFDYPYIAGGKRKA----P---PKAEKLVEFHTDVVKGAVAKFP--GHPLILAGKSMGSRVSCMVACKEDIAA 76 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~----~---~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~~~~~ 76 (180)
+.||.|+++|++|++...... . ........++.+.++++...+. .++++++|||+||.+++.++.+++..+
T Consensus 41 ~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~ 120 (212)
T TIGR01840 41 RYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVF 120 (212)
T ss_pred hCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhh
Confidence 469999999999974211100 0 0111234566777777776543 358999999999999999999999889
Q ss_pred ceEEEeccCCCCCCccc-----------c-----------hhhhccCCCcEEEEeecCCCCCChHHHHHHHHHcc
Q 030264 77 SAVLCLGYPLKGMNGAV-----------R-----------DELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMK 129 (180)
Q Consensus 77 ~~~~~~~~~~~~~~~~~-----------~-----------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 129 (180)
.+++.++.+........ . .........|++++||++|.++|++.++.+.+++.
T Consensus 121 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~ 195 (212)
T TIGR01840 121 AGGASNAGLPYGEASSSISATPQMCTAATAASVCRLVRGMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAML 195 (212)
T ss_pred eEEEeecCCcccccccchhhHhhcCCCCCHHHHHHHHhccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHH
Confidence 88887764432111000 0 00111233456799999999999999998888765
No 87
>PRK10115 protease 2; Provisional
Probab=99.53 E-value=3.3e-13 Score=107.33 Aligned_cols=143 Identities=12% Similarity=-0.014 Sum_probs=100.7
Q ss_pred ccCCceEEEEEeccCCCC-CCCCCC----CchHHHHHHHHHHHHHHHhh--CCCCcEEEEeeChhHHHHHHHhhcccccc
Q 030264 4 KALDAVEVVTFDYPYIAG-GKRKAP----PKAEKLVEFHTDVVKGAVAK--FPGHPLILAGKSMGSRVSCMVACKEDIAA 76 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~-g~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~ 76 (180)
.+++||.|+.+++||-++ |..... ..-....+|+.++++++... .+.++++++|-|.||.++..++.++|+.+
T Consensus 470 l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf 549 (686)
T PRK10115 470 LLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELF 549 (686)
T ss_pred HHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhhe
Confidence 467899999999999541 211000 11113467888888888775 23459999999999999999999989999
Q ss_pred ceEEEeccCCC--------------------CCCc----------ccchhhhccCCCc-EEEEeecCCCCCChHHHHHHH
Q 030264 77 SAVLCLGYPLK--------------------GMNG----------AVRDELLLQITVP-IMFVQGSKDGLCPLDKLEAVR 125 (180)
Q Consensus 77 ~~~~~~~~~~~--------------------~~~~----------~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~ 125 (180)
+++|+..+.+. +.+. ..+...+.+++.| +|+++|.+|+.|++.+..++.
T Consensus 550 ~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~ 629 (686)
T PRK10115 550 HGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWV 629 (686)
T ss_pred eEEEecCCchhHhhhcccCCCCCChhHHHHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHH
Confidence 99988442111 0000 0122345667789 567799999999999999998
Q ss_pred HHccCC---cEEEEE---cCCCCcccc
Q 030264 126 KKMKSL---SELHLI---DGGDHSFKI 146 (180)
Q Consensus 126 ~~~~~~---~~~~~~---~~~~H~~~~ 146 (180)
+++... ++++++ ++.||+...
T Consensus 630 a~Lr~~~~~~~~vl~~~~~~~GHg~~~ 656 (686)
T PRK10115 630 AKLRELKTDDHLLLLCTDMDSGHGGKS 656 (686)
T ss_pred HHHHhcCCCCceEEEEecCCCCCCCCc
Confidence 887532 667777 899999443
No 88
>COG0400 Predicted esterase [General function prediction only]
Probab=99.50 E-value=9.9e-13 Score=89.49 Aligned_cols=121 Identities=17% Similarity=0.230 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHhhCC--CCcEEEEeeChhHHHHHHHhhccccccceEEEeccCCCCCCcccchhhhccCCCcEEEEeecC
Q 030264 35 EFHTDVVKGAVAKFP--GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQGSK 112 (180)
Q Consensus 35 ~~~~~~~~~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 112 (180)
+...+.+....+.+. .++++++|+|.|+.+++.+..+.+..++++++++.-...... .....-.+|+++++|+.
T Consensus 81 ~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~----~~~~~~~~pill~hG~~ 156 (207)
T COG0400 81 EKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE----LLPDLAGTPILLSHGTE 156 (207)
T ss_pred HHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc----cccccCCCeEEEeccCc
Confidence 344444444444444 469999999999999999999999889999987733221111 22234468999999999
Q ss_pred CCCCChHHHHHHHHHccC---CcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHhh
Q 030264 113 DGLCPLDKLEAVRKKMKS---LSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSL 177 (180)
Q Consensus 113 D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 177 (180)
|+++|...+.++.+.+.+ .+++++++ +||.+.. +..+.+.+|+.+.+
T Consensus 157 Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~~-----------------e~~~~~~~wl~~~~ 206 (207)
T COG0400 157 DPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIPP-----------------EELEAARSWLANTL 206 (207)
T ss_pred CCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCCH-----------------HHHHHHHHHHHhcc
Confidence 999999888887766543 38888998 7998874 45556667877643
No 89
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.50 E-value=5.5e-13 Score=88.61 Aligned_cols=109 Identities=14% Similarity=0.209 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHh-hccccccceEEEeccCCCCCC-------cccchhhhccCCCcEE
Q 030264 35 EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVA-CKEDIAASAVLCLGYPLKGMN-------GAVRDELLLQITVPIM 106 (180)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~P~l 106 (180)
+.+.+.++...... .++++++|||+|+..++.++ .....++.++++++++-.... ..+.......+..|.+
T Consensus 40 ~~W~~~l~~~i~~~-~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~~~~~f~~~p~~~l~~~~~ 118 (171)
T PF06821_consen 40 DEWVQALDQAIDAI-DEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPPELDGFTPLPRDPLPFPSI 118 (171)
T ss_dssp HHHHHHHHHCCHC--TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTCGGCCCTTSHCCHHHCCEE
T ss_pred HHHHHHHHHHHhhc-CCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccchhhhccccccCcccccCCCeE
Confidence 44444444444433 34799999999999999999 666789999999995432100 0111112334457889
Q ss_pred EEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCcccc
Q 030264 107 FVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKI 146 (180)
Q Consensus 107 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 146 (180)
++.+++|+++|.+.+.++.+.+. ++++.++++||+...
T Consensus 119 viaS~nDp~vp~~~a~~~A~~l~--a~~~~~~~~GHf~~~ 156 (171)
T PF06821_consen 119 VIASDNDPYVPFERAQRLAQRLG--AELIILGGGGHFNAA 156 (171)
T ss_dssp EEEETTBSSS-HHHHHHHHHHHT---EEEEETS-TTSSGG
T ss_pred EEEcCCCCccCHHHHHHHHHHcC--CCeEECCCCCCcccc
Confidence 99999999999999999999987 899999999999765
No 90
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.45 E-value=7.7e-13 Score=91.22 Aligned_cols=131 Identities=19% Similarity=0.264 Sum_probs=92.1
Q ss_pred CceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhh-----CCCCcEEEEeeChhHHHHHHHhhccc----cccc
Q 030264 7 DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK-----FPGHPLILAGKSMGSRVSCMVACKED----IAAS 77 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~G~S~Gg~~a~~~a~~~~----~~~~ 77 (180)
.|+.|+.+|||-. +...+....+|+.+++.++.++ .+.++|+++|+|.||.+++.++.... ..++
T Consensus 28 ~g~~v~~~~Yrl~------p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~ 101 (211)
T PF07859_consen 28 RGFVVVSIDYRLA------PEAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPK 101 (211)
T ss_dssp HTSEEEEEE---T------TTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHES
T ss_pred ccEEEEEeecccc------ccccccccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcccchh
Confidence 7999999999974 4455667789999999999887 66679999999999999999997622 3478
Q ss_pred eEEEeccCCCC--CC-cc------------cc------------------hhhhc-----cC--CCcEEEEeecCCCCCC
Q 030264 78 AVLCLGYPLKG--MN-GA------------VR------------------DELLL-----QI--TVPIMFVQGSKDGLCP 117 (180)
Q Consensus 78 ~~~~~~~~~~~--~~-~~------------~~------------------~~~~~-----~~--~~P~l~i~g~~D~~~~ 117 (180)
+++++++...- .. .. +. .+.+. .. -.|+++++|+.|.++
T Consensus 102 ~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~Pp~~i~~g~~D~l~- 180 (211)
T PF07859_consen 102 GIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLPGSDRDDPLASPLNASDLKGLPPTLIIHGEDDVLV- 180 (211)
T ss_dssp EEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHSTGGTTSTTTSGGGSSCCTTCHEEEEEEETTSTTH-
T ss_pred hhhcccccccchhcccccccccccccccccccccccccccccccccccccccccccccccccccCCCeeeeccccccch-
Confidence 88887744311 10 00 00 00111 11 248999999999875
Q ss_pred hHHHHHHHHHccCC---cEEEEEcCCCCccc
Q 030264 118 LDKLEAVRKKMKSL---SELHLIDGGDHSFK 145 (180)
Q Consensus 118 ~~~~~~~~~~~~~~---~~~~~~~~~~H~~~ 145 (180)
+....+.+++.+. +++++++|..|.|.
T Consensus 181 -~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 181 -DDSLRFAEKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp -HHHHHHHHHHHHTT-EEEEEEETTEETTGG
T ss_pred -HHHHHHHHHHHHCCCCEEEEEECCCeEEee
Confidence 4566777666533 89999999999975
No 91
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.45 E-value=1.2e-12 Score=88.58 Aligned_cols=153 Identities=20% Similarity=0.289 Sum_probs=101.1
Q ss_pred ccCCceEEEEEeccCCCCCCCCCC------CchH-HHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcccccc
Q 030264 4 KALDAVEVVTFDYPYIAGGKRKAP------PKAE-KLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAA 76 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~ 76 (180)
++.+||.|+.+||||.+ .+++. -.+. -...|+..++.+++...+..+..++|||+||.+.-.+..+. +.
T Consensus 53 a~~~Gf~Vlt~dyRG~g--~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~~~--k~ 128 (281)
T COG4757 53 AAKAGFEVLTFDYRGIG--QSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQHP--KY 128 (281)
T ss_pred hhccCceEEEEeccccc--CCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecccccCc--cc
Confidence 46789999999999984 33332 1122 22578888899998888888999999999999876666552 32
Q ss_pred ceEEEecc-------------------------CCC-----------CCC----cc-c---------------------c
Q 030264 77 SAVLCLGY-------------------------PLK-----------GMN----GA-V---------------------R 94 (180)
Q Consensus 77 ~~~~~~~~-------------------------~~~-----------~~~----~~-~---------------------~ 94 (180)
.+....+. ++. +.. .. + .
T Consensus 129 ~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~ 208 (281)
T COG4757 129 AAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNY 208 (281)
T ss_pred ceeeEeccccccccchhhhhcccceeeccccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHH
Confidence 22222110 000 000 00 0 0
Q ss_pred hhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccC-CcEEEEEcC----CCCc-cccccccccccccchhHHHHHHHHH
Q 030264 95 DELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKS-LSELHLIDG----GDHS-FKIGKKHLQTMGTTQDEMEGLAVQA 168 (180)
Q Consensus 95 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~H~-~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (180)
.+..+.+++|++++...+|+.+|+...+.+.+.... +.+...++. .||. +.. +..|..++.
T Consensus 209 ~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR-------------~~~Ealwk~ 275 (281)
T COG4757 209 RQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFR-------------EPFEALWKE 275 (281)
T ss_pred HHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhc-------------cchHHHHHH
Confidence 123566889999999999999999999998877652 256666654 3676 322 223778888
Q ss_pred HHHHH
Q 030264 169 IAAFI 173 (180)
Q Consensus 169 i~~fl 173 (180)
+++|+
T Consensus 276 ~L~w~ 280 (281)
T COG4757 276 MLGWF 280 (281)
T ss_pred HHHhh
Confidence 88886
No 92
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.40 E-value=6.9e-12 Score=91.83 Aligned_cols=137 Identities=12% Similarity=0.088 Sum_probs=104.4
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCchHHH-HHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccc-cceEEEe
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPKAEKL-VEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIA-ASAVLCL 82 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~-~~~~~~~ 82 (180)
.++|+.|+.++|++-+ .....-..++. .+++...++.+++....++|.++|+|.||.+...+++.++.+ |+.++.+
T Consensus 136 ~~~g~~vfvIsw~nPd--~~~~~~~~edYi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~l 213 (445)
T COG3243 136 LEQGLDVFVISWRNPD--ASLAAKNLEDYILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLL 213 (445)
T ss_pred HHcCCceEEEeccCch--HhhhhccHHHHHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceee
Confidence 4689999999999853 22223334444 488889999999887778999999999999999999987766 8888887
Q ss_pred ccCCCCCC---------c------------------c-------------------------------c-----------
Q 030264 83 GYPLKGMN---------G------------------A-------------------------------V----------- 93 (180)
Q Consensus 83 ~~~~~~~~---------~------------------~-------------------------------~----------- 93 (180)
.+|+.-.. + . +
T Consensus 214 ts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~ 293 (445)
T COG3243 214 TSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTR 293 (445)
T ss_pred ecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCcc
Confidence 66533000 0 0 0
Q ss_pred ----------------------------chhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCcc
Q 030264 94 ----------------------------RDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSF 144 (180)
Q Consensus 94 ----------------------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 144 (180)
..-.+.+++||++++.++.|.+.|.+.+....+.++..+++++.+ +||.-
T Consensus 294 ~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~~-sGHIa 371 (445)
T COG3243 294 LPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGGEVTFVLSR-SGHIA 371 (445)
T ss_pred CchHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEEEeecccccCCHHHHHHHHHhcCCceEEEEec-CceEE
Confidence 001467899999999999999999999999988888767777775 68983
No 93
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.40 E-value=1e-11 Score=88.92 Aligned_cols=79 Identities=14% Similarity=0.030 Sum_probs=59.5
Q ss_pred ccCCceEEEEEeccCCCCCCCCCC-Cc-hHHHHHHHHHHHHHHHhh-CCCCcEEEEeeChhHHHHHHHhhccccccceEE
Q 030264 4 KALDAVEVVTFDYPYIAGGKRKAP-PK-AEKLVEFHTDVVKGAVAK-FPGHPLILAGKSMGSRVSCMVACKEDIAASAVL 80 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~~~-~~-~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~ 80 (180)
.+++||.|+..|.||.+ .|... .. ...-.+|..++++|+... .++.+|+++|.|.+|..++.+|...++.+++++
T Consensus 53 ~~~~GY~vV~~D~RG~g--~S~G~~~~~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~ 130 (272)
T PF02129_consen 53 FAERGYAVVVQDVRGTG--GSEGEFDPMSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIV 130 (272)
T ss_dssp HHHTT-EEEEEE-TTST--TS-S-B-TTSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEE
T ss_pred HHhCCCEEEEECCcccc--cCCCccccCChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEE
Confidence 56889999999999984 33322 22 455678999999999875 334499999999999999999998888999988
Q ss_pred Eecc
Q 030264 81 CLGY 84 (180)
Q Consensus 81 ~~~~ 84 (180)
....
T Consensus 131 p~~~ 134 (272)
T PF02129_consen 131 PQSG 134 (272)
T ss_dssp EESE
T ss_pred eccc
Confidence 7553
No 94
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.40 E-value=2.2e-12 Score=91.45 Aligned_cols=78 Identities=12% Similarity=0.044 Sum_probs=62.3
Q ss_pred cCCceEEEEEeccCCCCCCCCC---CCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEE
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKA---PPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLC 81 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~ 81 (180)
+++||.|+++|+||++ .+.. ........+|+..+++++... ...+++++||||||.+++.++.+++..++++|+
T Consensus 53 a~~Gy~Vl~~Dl~G~G--~S~g~~~~~~~~~~~~Dv~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL 129 (266)
T TIGR03101 53 AAGGFGVLQIDLYGCG--DSAGDFAAARWDVWKEDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPLAAKCNRLVL 129 (266)
T ss_pred HHCCCEEEEECCCCCC--CCCCccccCCHHHHHHHHHHHHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhCccccceEEE
Confidence 4579999999999994 3322 234555678888888888765 456899999999999999999998889999999
Q ss_pred eccC
Q 030264 82 LGYP 85 (180)
Q Consensus 82 ~~~~ 85 (180)
+++.
T Consensus 130 ~~P~ 133 (266)
T TIGR03101 130 WQPV 133 (266)
T ss_pred eccc
Confidence 8743
No 95
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.38 E-value=6e-11 Score=83.13 Aligned_cols=147 Identities=21% Similarity=0.312 Sum_probs=98.7
Q ss_pred eEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEeccCCC-
Q 030264 9 VEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK- 87 (180)
Q Consensus 9 ~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~- 87 (180)
|.++.+|+||+ |.+. .. ........+.+..+...+...++.++|||+||.++..++.++|..+.++++++.+..
T Consensus 51 ~~~~~~d~~g~--g~s~-~~--~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~ 125 (282)
T COG0596 51 YRVIAPDLRGH--GRSD-PA--GYSLSAYADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPP 125 (282)
T ss_pred eEEEEecccCC--CCCC-cc--cccHHHHHHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCc
Confidence 99999999998 4443 11 111111133344444455555699999999999999999999988999988773211
Q ss_pred ------------------------CC--------------Ccccc-------h---------------------------
Q 030264 88 ------------------------GM--------------NGAVR-------D--------------------------- 95 (180)
Q Consensus 88 ------------------------~~--------------~~~~~-------~--------------------------- 95 (180)
.. ..... .
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (282)
T COG0596 126 GLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAAL 205 (282)
T ss_pred ccccCccccCccccchhhhhhhhhccchhhhhhhhhcccccccccccchhccccccccccchhHhhhhhhhcccccchhh
Confidence 00 00000 0
Q ss_pred ---------hhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHH
Q 030264 96 ---------ELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAV 166 (180)
Q Consensus 96 ---------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~ 166 (180)
.....+.+|+++++|+.|.+.+......+.+..+...++.++++++|..+. +.++.++
T Consensus 206 ~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-------------~~p~~~~ 272 (282)
T COG0596 206 LALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHL-------------EAPEAFA 272 (282)
T ss_pred hcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchh-------------hcHHHHH
Confidence 023445689999999999767666555565555423789999999999887 5566777
Q ss_pred HHHHHHH
Q 030264 167 QAIAAFI 173 (180)
Q Consensus 167 ~~i~~fl 173 (180)
+.+.+|+
T Consensus 273 ~~i~~~~ 279 (282)
T COG0596 273 AALLAFL 279 (282)
T ss_pred HHHHHHH
Confidence 7777744
No 96
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.37 E-value=5.2e-12 Score=87.75 Aligned_cols=75 Identities=17% Similarity=0.251 Sum_probs=50.6
Q ss_pred ceEEEEEeccCCCCCCCCCC--CchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcc-ccccceEEEec
Q 030264 8 AVEVVTFDYPYIAGGKRKAP--PKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE-DIAASAVLCLG 83 (180)
Q Consensus 8 g~~v~~~d~~g~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~~~~~~~~~~~ 83 (180)
..+|+++|+|||++.....+ ...+.+..|+..+++.+=...+. +|+++||||||.++...+... =+.+.+++++.
T Consensus 102 ~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~-~iilVGHSmGGaIav~~a~~k~lpsl~Gl~viD 179 (343)
T KOG2564|consen 102 RCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPP-QIILVGHSMGGAIAVHTAASKTLPSLAGLVVID 179 (343)
T ss_pred ceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCC-ceEEEeccccchhhhhhhhhhhchhhhceEEEE
Confidence 46789999999953322222 33455567777766666433333 799999999999998888762 13377777644
No 97
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.37 E-value=1.4e-11 Score=91.62 Aligned_cols=69 Identities=22% Similarity=0.244 Sum_probs=54.7
Q ss_pred hhccCC-CcEEEEeecCCCCCChHHHHHHHHHc---cCC-cEEEEEcCCCCc-cccccccccccccchhHHHHHHHHHHH
Q 030264 97 LLLQIT-VPIMFVQGSKDGLCPLDKLEAVRKKM---KSL-SELHLIDGGDHS-FKIGKKHLQTMGTTQDEMEGLAVQAIA 170 (180)
Q Consensus 97 ~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~H~-~~~~~~~~~~~~~~~~~~~~~~~~~i~ 170 (180)
.+++|+ +|+|.+.|+.|.++++..+..+.+.+ ++. .+.++.+++||. +.... ...+++|..+.
T Consensus 332 dl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~-----------r~~~~i~P~i~ 400 (406)
T TIGR01849 332 DPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGS-----------RFREEIYPLVR 400 (406)
T ss_pred cHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeCh-----------hhhhhhchHHH
Confidence 467888 99999999999999999999988874 433 557777788998 33322 55678999999
Q ss_pred HHHHHh
Q 030264 171 AFISKS 176 (180)
Q Consensus 171 ~fl~~~ 176 (180)
+||.++
T Consensus 401 ~wl~~~ 406 (406)
T TIGR01849 401 EFIRRN 406 (406)
T ss_pred HHHHhC
Confidence 999763
No 98
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.36 E-value=1.5e-11 Score=85.08 Aligned_cols=143 Identities=17% Similarity=0.160 Sum_probs=101.2
Q ss_pred CccccCCceEEEEEeccCCCCCCC---CCCCc-------------------hHHHHHHHHHHHHHHHhh--CCCCcEEEE
Q 030264 1 MLGKALDAVEVVTFDYPYIAGGKR---KAPPK-------------------AEKLVEFHTDVVKGAVAK--FPGHPLILA 56 (180)
Q Consensus 1 ~~~~a~~g~~v~~~d~~g~~~g~~---~~~~~-------------------~~~~~~~~~~~~~~~~~~--~~~~~i~l~ 56 (180)
++..+..||.|+.+|.||.+.+.. .++.. +..+..|+.++++.+.+. .+.++|++.
T Consensus 102 ~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~ 181 (321)
T COG3458 102 MLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVT 181 (321)
T ss_pred cccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEe
Confidence 345678899999999999752211 11111 111246777777777664 455699999
Q ss_pred eeChhHHHHHHHhhccccccceEEEeccCCC-CCCccc---------------------------------chhhhccCC
Q 030264 57 GKSMGSRVSCMVACKEDIAASAVLCLGYPLK-GMNGAV---------------------------------RDELLLQIT 102 (180)
Q Consensus 57 G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~-~~~~~~---------------------------------~~~~~~~~~ 102 (180)
|.|.||.+++.+++.. ++++++++.- |+- ..+..+ ..+....++
T Consensus 182 G~SqGGglalaaaal~-~rik~~~~~~-Pfl~df~r~i~~~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK 259 (321)
T COG3458 182 GGSQGGGLALAAAALD-PRIKAVVADY-PFLSDFPRAIELATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIK 259 (321)
T ss_pred ccccCchhhhhhhhcC-hhhhcccccc-cccccchhheeecccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhc
Confidence 9999999999999886 4677777633 322 111000 012356788
Q ss_pred CcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccc
Q 030264 103 VPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFK 145 (180)
Q Consensus 103 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~ 145 (180)
.|+|+..|=-|+++|+...-..++.+....++.+|+--+|.-.
T Consensus 260 ~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~ 302 (321)
T COG3458 260 VPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGG 302 (321)
T ss_pred cceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccC
Confidence 9999999999999999999999999987788999987778744
No 99
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.35 E-value=5.2e-11 Score=86.98 Aligned_cols=152 Identities=20% Similarity=0.183 Sum_probs=100.1
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhh-----CCCCcEEEEeeChhHHHHHHHhhccc----cc
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK-----FPGHPLILAGKSMGSRVSCMVACKED----IA 75 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~G~S~Gg~~a~~~a~~~~----~~ 75 (180)
++.|+.|+.+|||-. +...+....+|+.+++.++.++ .+.++|+++|+|.||.+++.++..-. ..
T Consensus 107 ~~~g~~vv~vdYrla------Pe~~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~ 180 (312)
T COG0657 107 AAAGAVVVSVDYRLA------PEHPFPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPL 180 (312)
T ss_pred HHcCCEEEecCCCCC------CCCCCCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCC
Confidence 467999999999986 2334445567777777777765 23568999999999999999997732 24
Q ss_pred cceEEEeccCCCCCC-c-cc-----------------------------c--------hhhhccCCCcEEEEeecCCCCC
Q 030264 76 ASAVLCLGYPLKGMN-G-AV-----------------------------R--------DELLLQITVPIMFVQGSKDGLC 116 (180)
Q Consensus 76 ~~~~~~~~~~~~~~~-~-~~-----------------------------~--------~~~~~~~~~P~l~i~g~~D~~~ 116 (180)
..+.+++.+.+.... . .+ . .+.+.. -.|+++++|+.|.+.
T Consensus 181 p~~~~li~P~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l~ 259 (312)
T COG0657 181 PAAQVLISPLLDLTSSAASLPGYGEADLLDAAAILAWFADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEFDPLR 259 (312)
T ss_pred ceEEEEEecccCCcccccchhhcCCccccCHHHHHHHHHHHhCcCccccCCCccCccccccccC-CCCEEEEecCCCcch
Confidence 455555442211110 0 00 0 001222 468999999999998
Q ss_pred ChHHHHHHHHHcc---CCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHH
Q 030264 117 PLDKLEAVRKKMK---SLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISK 175 (180)
Q Consensus 117 ~~~~~~~~~~~~~---~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 175 (180)
+ +...+.+++. ..++++.+++..|.|..... ....+.+..+.+|+..
T Consensus 260 ~--~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~~----------~~a~~~~~~~~~~l~~ 309 (312)
T COG0657 260 D--EGEAYAERLRAAGVPVELRVYPGMIHGFDLLTG----------PEARSALRQIAAFLRA 309 (312)
T ss_pred h--HHHHHHHHHHHcCCeEEEEEeCCcceeccccCc----------HHHHHHHHHHHHHHHH
Confidence 7 5555555543 23889999999998865321 3344457778888764
No 100
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.35 E-value=1.5e-11 Score=87.45 Aligned_cols=157 Identities=12% Similarity=0.098 Sum_probs=65.1
Q ss_pred CCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhC----CCCcEEEEeeChhHHHHHHHhhcc-----cccc
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF----PGHPLILAGKSMGSRVSCMVACKE-----DIAA 76 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~~-----~~~~ 76 (180)
..||.++.+.++-. -........++..+++.+++++++... ..++|+|||||.|+.-++.++... ...|
T Consensus 61 ~~~wsl~q~~LsSS--y~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~V 138 (303)
T PF08538_consen 61 ETGWSLFQVQLSSS--YSGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPV 138 (303)
T ss_dssp -TT-EEEEE--GGG--BTTS-S--HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCE
T ss_pred cCCeEEEEEEecCc--cCCcCcchhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccce
Confidence 35899999987652 112245667788899999999999873 456999999999999999999873 3679
Q ss_pred ceEEEeccCCCCCCc-----------------------------c---------c-------------------------
Q 030264 77 SAVLCLGYPLKGMNG-----------------------------A---------V------------------------- 93 (180)
Q Consensus 77 ~~~~~~~~~~~~~~~-----------------------------~---------~------------------------- 93 (180)
+++|+-++ +..... . .
T Consensus 139 dG~ILQAp-VSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSS 217 (303)
T PF08538_consen 139 DGAILQAP-VSDREAILNFLGEREAYEELVALAKELIAEGKGDEILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSS 217 (303)
T ss_dssp EEEEEEEE----TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHH
T ss_pred EEEEEeCC-CCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCceeeccccccccCCCcccHHHHHhccCCCCcccccCC
Confidence 99999652 110000 0 0
Q ss_pred ------chhhhccCCCcEEEEeecCCCCCChHHH-----HHHHHHccCC---cEEEEEcCCCCccccccccccccccchh
Q 030264 94 ------RDELLLQITVPIMFVQGSKDGLCPLDKL-----EAVRKKMKSL---SELHLIDGGDHSFKIGKKHLQTMGTTQD 159 (180)
Q Consensus 94 ------~~~~~~~~~~P~l~i~g~~D~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 159 (180)
..+.+..+++|+|++.+++|+++|...- +++.+..++. ..-.++||+.|.+.... ++
T Consensus 218 DL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~---------~~ 288 (303)
T PF08538_consen 218 DLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPS---------QA 288 (303)
T ss_dssp HHTT-HHHHTGGG--S-EEEEEE--TT-----------------------------------------------------
T ss_pred CCCHHHHHHHhccCCCceEEEecCCCceecccccccccccccccccccccccccccccccccccccccc---------cc
Confidence 0024567788999999999999987322 2233222211 22458999999987532 11
Q ss_pred HHHHHHHHHHHHHHH
Q 030264 160 EMEGLAVQAIAAFIS 174 (180)
Q Consensus 160 ~~~~~~~~~i~~fl~ 174 (180)
+..+++.+.+..||+
T Consensus 289 ~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 289 EAREWLVERVVKFLK 303 (303)
T ss_dssp ---------------
T ss_pred cccccccccccccCC
Confidence 335577888888874
No 101
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.31 E-value=2.8e-11 Score=80.27 Aligned_cols=146 Identities=17% Similarity=0.192 Sum_probs=98.9
Q ss_pred ccCCceEEEEEecc-CCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcc----ccccce
Q 030264 4 KALDAVEVVTFDYP-YIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE----DIAASA 78 (180)
Q Consensus 4 ~a~~g~~v~~~d~~-g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~~~~~~ 78 (180)
.+++|+.|+.+|-+ ++ .+ .-.+++...|+.++++....++..+++.|+|+|+|+-+......+- ..++..
T Consensus 25 l~~~G~~VvGvdsl~Yf--w~---~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~ 99 (192)
T PF06057_consen 25 LAKQGVPVVGVDSLRYF--WS---ERTPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQ 99 (192)
T ss_pred HHHCCCeEEEechHHHH--hh---hCCHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeE
Confidence 36789999999954 44 22 2335566789999999999999999999999999998877777663 356888
Q ss_pred EEEeccCCC-----------C--CCcc--cchhhhccCC-CcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCC
Q 030264 79 VLCLGYPLK-----------G--MNGA--VRDELLLQIT-VPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDH 142 (180)
Q Consensus 79 ~~~~~~~~~-----------~--~~~~--~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 142 (180)
++++++.-. + .++. .....++++. .|+++|+|++|.-..-. .+. .++.+++.+|| ||
T Consensus 100 v~Ll~p~~~~dFeihv~~wlg~~~~~~~~~~~pei~~l~~~~v~CiyG~~E~d~~cp---~l~---~~~~~~i~lpG-gH 172 (192)
T PF06057_consen 100 VVLLSPSTTADFEIHVSGWLGMGGDDAAYPVIPEIAKLPPAPVQCIYGEDEDDSLCP---SLR---QPGVEVIALPG-GH 172 (192)
T ss_pred EEEeccCCcceEEEEhhhhcCCCCCcccCCchHHHHhCCCCeEEEEEcCCCCCCcCc---ccc---CCCcEEEEcCC-Cc
Confidence 888875322 0 1111 2234556664 49999999877542111 111 23489999997 67
Q ss_pred ccccccccccccccchhHHHHHHHHHHHHHHHH
Q 030264 143 SFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISK 175 (180)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 175 (180)
.|..+ .+.+.+.|++-+++
T Consensus 173 Hfd~d--------------y~~La~~Il~~l~~ 191 (192)
T PF06057_consen 173 HFDGD--------------YDALAKRILDALKA 191 (192)
T ss_pred CCCCC--------------HHHHHHHHHHHHhc
Confidence 77743 45677777766543
No 102
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.31 E-value=5.4e-11 Score=85.89 Aligned_cols=134 Identities=22% Similarity=0.339 Sum_probs=95.2
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCchHH--------------HHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhh
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPKAEK--------------LVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVAC 70 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 70 (180)
+++|+..+.+..|++ |.+.|...... .+.+...+++|+.++ +..++++.|.||||.+|.++++
T Consensus 118 l~~gi~s~~le~Pyy--g~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~~-G~~~~g~~G~SmGG~~A~laa~ 194 (348)
T PF09752_consen 118 LKEGIASLILENPYY--GQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLERE-GYGPLGLTGISMGGHMAALAAS 194 (348)
T ss_pred HHcCcceEEEecccc--cccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHHhc-CCCceEEEEechhHhhHHhhhh
Confidence 456999999999999 55554433221 245666777888887 6669999999999999999999
Q ss_pred ccccccceEEEeccCCCC-------CC---------cc----------------------------cc-hh---------
Q 030264 71 KEDIAASAVLCLGYPLKG-------MN---------GA----------------------------VR-DE--------- 96 (180)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~-------~~---------~~----------------------------~~-~~--------- 96 (180)
..|..+..+-|++..... +. .. .. .+
T Consensus 195 ~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~m 274 (348)
T PF09752_consen 195 NWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVM 274 (348)
T ss_pred cCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchhhhhcccccCcccccchhhccccchHHHHHHHHHHH
Confidence 998888777776632110 00 00 00 00
Q ss_pred ----hhccCCC-----cEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCc
Q 030264 97 ----LLLQITV-----PIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHS 143 (180)
Q Consensus 97 ----~~~~~~~-----P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 143 (180)
.+.+..+ .+.+|.+++|.++|.+.+..+.+..+ .+++.+++| ||.
T Consensus 275 d~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WP-GsEvR~l~g-GHV 328 (348)
T PF09752_consen 275 DSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWP-GSEVRYLPG-GHV 328 (348)
T ss_pred HhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHhCC-CCeEEEecC-CcE
Confidence 1222333 48999999999999999998776665 699999987 998
No 103
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.30 E-value=5.3e-11 Score=95.45 Aligned_cols=161 Identities=13% Similarity=0.167 Sum_probs=109.0
Q ss_pred cCCceEEEEEeccCCCC-CCCCCCCchH----HHHHHHHHHHHHHHhh--CCCCcEEEEeeChhHHHHHHHhhccc-ccc
Q 030264 5 ALDAVEVVTFDYPYIAG-GKRKAPPKAE----KLVEFHTDVVKGAVAK--FPGHPLILAGKSMGSRVSCMVACKED-IAA 76 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~-g~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~-~~~ 76 (180)
...|+.|+.+|.||.+. |......-.. ...+|...++.++.+. .+.++|.++|+|.||.+++..+...+ .-+
T Consensus 555 s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~f 634 (755)
T KOG2100|consen 555 SSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVF 634 (755)
T ss_pred ccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceE
Confidence 45799999999999741 1111011111 1135555555555553 44569999999999999999999976 555
Q ss_pred ceEEEeccCCCC--------------CCc--------ccchhhhccCCCcE-EEEeecCCCCCChHHHHHHHHHccCC--
Q 030264 77 SAVLCLGYPLKG--------------MNG--------AVRDELLLQITVPI-MFVQGSKDGLCPLDKLEAVRKKMKSL-- 131 (180)
Q Consensus 77 ~~~~~~~~~~~~--------------~~~--------~~~~~~~~~~~~P~-l~i~g~~D~~~~~~~~~~~~~~~~~~-- 131 (180)
++.++++ |+.. .+. ......+..++.|. |++||+.|..++.+++..+.+++..+
T Consensus 635 kcgvava-PVtd~~~yds~~terymg~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv 713 (755)
T KOG2100|consen 635 KCGVAVA-PVTDWLYYDSTYTERYMGLPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGV 713 (755)
T ss_pred EEEEEec-ceeeeeeecccccHhhcCCCccccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCC
Confidence 5556555 3221 000 11122355566666 99999999999999999999887644
Q ss_pred -cEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHhhc
Q 030264 132 -SELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSLG 178 (180)
Q Consensus 132 -~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 178 (180)
+++.+||+.+|++... +........+..|+..++.
T Consensus 714 ~~~~~vypde~H~is~~------------~~~~~~~~~~~~~~~~~~~ 749 (755)
T KOG2100|consen 714 PFRLLVYPDENHGISYV------------EVISHLYEKLDRFLRDCFG 749 (755)
T ss_pred ceEEEEeCCCCcccccc------------cchHHHHHHHHHHHHHHcC
Confidence 7889999999998753 2236678888999987653
No 104
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.30 E-value=3.9e-10 Score=78.98 Aligned_cols=121 Identities=17% Similarity=0.218 Sum_probs=82.3
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCC-CCcEEEEeeChhHHHHHHHhhccccccceEEEec
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFP-GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLG 83 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~ 83 (180)
...|.+++.++|||+ |....++.....-.+-...+..+.+.+. .++++++|||.||..|+.++..+| ..++++++
T Consensus 59 ~~~~iR~I~iN~PGf--~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin 134 (297)
T PF06342_consen 59 DEAGIRFIGINYPGF--GFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLIN 134 (297)
T ss_pred HHcCeEEEEeCCCCC--CCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEEEec
Confidence 457999999999998 5444444433333444444555555443 248999999999999999999984 56888887
Q ss_pred cCCCCCCccc----c-------------------------------------------------------hhhhccCCCc
Q 030264 84 YPLKGMNGAV----R-------------------------------------------------------DELLLQITVP 104 (180)
Q Consensus 84 ~~~~~~~~~~----~-------------------------------------------------------~~~~~~~~~P 104 (180)
++...+-... + .+.+++-.+|
T Consensus 135 ~~G~r~HkgIrp~~r~~~i~~l~~~lp~~~~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ik 214 (297)
T PF06342_consen 135 PPGLRPHKGIRPLSRMETINYLYDLLPRFIINAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIK 214 (297)
T ss_pred CCccccccCcCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCc
Confidence 6533111100 0 0134455689
Q ss_pred EEEEeecCCCCCChHHHHHHHHHcc
Q 030264 105 IMFVQGSKDGLCPLDKLEAVRKKMK 129 (180)
Q Consensus 105 ~l~i~g~~D~~~~~~~~~~~~~~~~ 129 (180)
+++++|.+|.++..+.+.++.+.+.
T Consensus 215 vli~ygg~DhLIEeeI~~E~a~~f~ 239 (297)
T PF06342_consen 215 VLIAYGGKDHLIEEEISFEFAMKFK 239 (297)
T ss_pred EEEEEcCcchhhHHHHHHHHHHHhC
Confidence 9999999999998877777765543
No 105
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.29 E-value=1.6e-10 Score=75.18 Aligned_cols=109 Identities=15% Similarity=0.103 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEeccCCCCCCcccc-------hhhhccCCCcEEE
Q 030264 35 EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVR-------DELLLQITVPIMF 107 (180)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~P~l~ 107 (180)
+++.+.+....... .+++++++||+|+..++.++.+....|.+++++++|-...+.... .....++.-|.++
T Consensus 44 ~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~~tf~~~p~~~lpfps~v 122 (181)
T COG3545 44 DDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHLMTFDPIPREPLPFPSVV 122 (181)
T ss_pred HHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccccccchhhccccCCCccccCCCceeE
Confidence 55555555555544 447999999999999999999977799999999976543332211 1223445568999
Q ss_pred EeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCcccc
Q 030264 108 VQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKI 146 (180)
Q Consensus 108 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 146 (180)
+.+++|++++++.++.+.+... ..++....+||....
T Consensus 123 vaSrnDp~~~~~~a~~~a~~wg--s~lv~~g~~GHiN~~ 159 (181)
T COG3545 123 VASRNDPYVSYEHAEDLANAWG--SALVDVGEGGHINAE 159 (181)
T ss_pred EEecCCCCCCHHHHHHHHHhcc--Hhheecccccccchh
Confidence 9999999999999999999887 788888888998654
No 106
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.29 E-value=1e-10 Score=91.47 Aligned_cols=78 Identities=13% Similarity=-0.049 Sum_probs=61.0
Q ss_pred ccCCceEEEEEeccCCCCCCCCCC-Cch-HHHHHHHHHHHHHHHhh-CCCCcEEEEeeChhHHHHHHHhhccccccceEE
Q 030264 4 KALDAVEVVTFDYPYIAGGKRKAP-PKA-EKLVEFHTDVVKGAVAK-FPGHPLILAGKSMGSRVSCMVACKEDIAASAVL 80 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~~~-~~~-~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~ 80 (180)
.+++||.|+++|+||++ .+... ... ....+|+.++++++... +...+|+++|+|+||.+++.++..+++.+++++
T Consensus 49 l~~~Gy~vv~~D~RG~g--~S~g~~~~~~~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv 126 (550)
T TIGR00976 49 FVAQGYAVVIQDTRGRG--ASEGEFDLLGSDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIA 126 (550)
T ss_pred HHhCCcEEEEEeccccc--cCCCceEecCcccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEe
Confidence 35789999999999984 33322 111 45568899999998775 344699999999999999999999888898888
Q ss_pred Eec
Q 030264 81 CLG 83 (180)
Q Consensus 81 ~~~ 83 (180)
..+
T Consensus 127 ~~~ 129 (550)
T TIGR00976 127 PQE 129 (550)
T ss_pred ecC
Confidence 743
No 107
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.29 E-value=6.9e-10 Score=77.62 Aligned_cols=169 Identities=22% Similarity=0.246 Sum_probs=107.7
Q ss_pred ccCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHh----hC------CCCcEEEEeeChhHHHHHHHhhcc-
Q 030264 4 KALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVA----KF------PGHPLILAGKSMGSRVSCMVACKE- 72 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~------~~~~i~l~G~S~Gg~~a~~~a~~~- 72 (180)
.|+.||.|+.+|+.... ..... ...+.+.++++|+.+ .+ +..+++++|||-||-++..++..+
T Consensus 40 vAShGyIVV~~d~~~~~--~~~~~----~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~ 113 (259)
T PF12740_consen 40 VASHGYIVVAPDLYSIG--GPDDT----DEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNA 113 (259)
T ss_pred HHhCceEEEEecccccC--CCCcc----hhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhc
Confidence 47889999999976652 11111 223445555555443 21 334899999999999999999886
Q ss_pred ----ccccceEEEeccCCCCCCc-------ccch-hhhccCCCcEEEEeecCCCC--------C-Ch-HHHHHHHHHccC
Q 030264 73 ----DIAASAVLCLGYPLKGMNG-------AVRD-ELLLQITVPIMFVQGSKDGL--------C-PL-DKLEAVRKKMKS 130 (180)
Q Consensus 73 ----~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~P~l~i~g~~D~~--------~-~~-~~~~~~~~~~~~ 130 (180)
..++++++++. |+.+... .+.. ...-+.+.|++++...-+.. + |. .+..+++..++.
T Consensus 114 ~~~~~~~~~ali~lD-PVdG~~~~~~~~P~v~~~~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~ 192 (259)
T PF12740_consen 114 SSSLDLRFSALILLD-PVDGMSKGSQTEPPVLTYTPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKP 192 (259)
T ss_pred ccccccceeEEEEec-cccccccccCCCCccccCcccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCC
Confidence 45799999988 5543211 1111 12223458999997776632 2 22 466788888876
Q ss_pred CcEEEEEcCCCCccccccc---c--------cccccc-chhHHHHHHHHHHHHHHHHhhcC
Q 030264 131 LSELHLIDGGDHSFKIGKK---H--------LQTMGT-TQDEMEGLAVQAIAAFISKSLGE 179 (180)
Q Consensus 131 ~~~~~~~~~~~H~~~~~~~---~--------~~~~~~-~~~~~~~~~~~~i~~fl~~~~~~ 179 (180)
++-..+.++.||.=+.+.. . .+..+. ...+..+-+...+..|++..+..
T Consensus 193 p~~~~v~~~~GH~d~LDd~~~~~~~~~~~~~~Ck~g~~~~~~~r~f~~g~~vAfl~~~l~g 253 (259)
T PF12740_consen 193 PSWHFVAKDYGHMDFLDDDTPGYVGLCLFRCLCKNGPDDRDPMRRFVGGIMVAFLNAQLQG 253 (259)
T ss_pred CEEEEEeCCCCchHhhcCCCcchhHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 6666677899999444332 1 122333 55566666777888999888754
No 108
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.28 E-value=1.5e-10 Score=83.43 Aligned_cols=63 Identities=22% Similarity=0.291 Sum_probs=48.4
Q ss_pred CCcEEEEeecCCCCCChHHHHHHHHHcc----CCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHhh
Q 030264 102 TVPIMFVQGSKDGLCPLDKLEAVRKKMK----SLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSL 177 (180)
Q Consensus 102 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 177 (180)
+.|+++.+|..|.++|+....++.+++. .+++++.+++.+|.-.. .......+.||..++
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~----------------~~~~~~a~~Wl~~rf 282 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAA----------------FASAPDALAWLDDRF 282 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhh----------------hcCcHHHHHHHHHHH
Confidence 5799999999999999998888877642 24788888999997443 223456789998887
Q ss_pred cCC
Q 030264 178 GER 180 (180)
Q Consensus 178 ~~~ 180 (180)
+++
T Consensus 283 ~G~ 285 (290)
T PF03583_consen 283 AGK 285 (290)
T ss_pred CCC
Confidence 653
No 109
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.26 E-value=3.5e-12 Score=92.85 Aligned_cols=132 Identities=17% Similarity=0.134 Sum_probs=73.2
Q ss_pred cccCCceEEEEEeccCCCCCCCCCCC--------chHHH---------------HHHHHHHHHHHHhh--CCCCcEEEEe
Q 030264 3 GKALDAVEVVTFDYPYIAGGKRKAPP--------KAEKL---------------VEFHTDVVKGAVAK--FPGHPLILAG 57 (180)
Q Consensus 3 ~~a~~g~~v~~~d~~g~~~g~~~~~~--------~~~~~---------------~~~~~~~~~~~~~~--~~~~~i~l~G 57 (180)
.+|++||.|+++|.+|++ .+.+.. ....+ .-+...+++++.+. .+.++|+++|
T Consensus 155 ~LAk~GYVvla~D~~g~G--ER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~G 232 (390)
T PF12715_consen 155 QLAKRGYVVLAPDALGFG--ERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMG 232 (390)
T ss_dssp HHHTTTSEEEEE--TTSG--GG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEE
T ss_pred HHHhCCCEEEEEcccccc--ccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEe
Confidence 357899999999999985 222211 11111 02333456676653 3456999999
Q ss_pred eChhHHHHHHHhhccccccceEEEeccCCC--------C-----------------CCc---ccchhhhccC--CCcEEE
Q 030264 58 KSMGSRVSCMVACKEDIAASAVLCLGYPLK--------G-----------------MNG---AVRDELLLQI--TVPIMF 107 (180)
Q Consensus 58 ~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~--------~-----------------~~~---~~~~~~~~~~--~~P~l~ 107 (180)
+||||..++.+++.. ++|++.+..++... . .++ ......+..+ ..|+|+
T Consensus 233 fSmGg~~a~~LaALD-dRIka~v~~~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~PdIasliAPRPll~ 311 (390)
T PF12715_consen 233 FSMGGYRAWWLAALD-DRIKATVANGYLCTTQERALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFPDIASLIAPRPLLF 311 (390)
T ss_dssp EGGGHHHHHHHHHH--TT--EEEEES-B--HHHHHHHB----TTS----SS-GGG--TTCCCC--HHHHHHTTTTS-EEE
T ss_pred ecccHHHHHHHHHcc-hhhHhHhhhhhhhccchhhHhhccccccccCcCcchhhhhCccHHhhCccHHHHHHhCCCcchh
Confidence 999999999999995 57877776553211 0 011 1112233333 579999
Q ss_pred EeecCCCCCChHHHHHHHHHcc--CCcEEEEEcC
Q 030264 108 VQGSKDGLCPLDKLEAVRKKMK--SLSELHLIDG 139 (180)
Q Consensus 108 i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~ 139 (180)
+.|..|..+|. +++.++.+. .+.+++.||+
T Consensus 312 ~nG~~Dklf~i--V~~AY~~~~~p~n~~~~~~p~ 343 (390)
T PF12715_consen 312 ENGGKDKLFPI--VRRAYAIMGAPDNFQIHHYPK 343 (390)
T ss_dssp SS-B-HHHHHH--HHHHHHHTT-GGGEEE---GG
T ss_pred hcCCcccccHH--HHHHHHhcCCCcceEEeeccc
Confidence 99999988754 666666654 3488888885
No 110
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.23 E-value=3.6e-10 Score=76.21 Aligned_cols=124 Identities=16% Similarity=0.117 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcc--------ccccceEEEeccCCCCCCcccchhhhccCCCcEE
Q 030264 35 EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE--------DIAASAVLCLGYPLKGMNGAVRDELLLQITVPIM 106 (180)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 106 (180)
+.+..+.++++++-+-+ +|+|+|.|+.++..++... .+.++.+|+++.................+++|.|
T Consensus 90 esl~yl~~~i~enGPFD--GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~~~~~~~~~i~~PSL 167 (230)
T KOG2551|consen 90 ESLEYLEDYIKENGPFD--GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKLDESAYKRPLSTPSL 167 (230)
T ss_pred HHHHHHHHHHHHhCCCc--cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchhhhhhhccCCCCCee
Confidence 34555566666665442 6999999999999999831 1234555554422111111112234557899999
Q ss_pred EEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHhh
Q 030264 107 FVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSL 177 (180)
Q Consensus 107 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 177 (180)
-|.|+.|.+++...+..+++.+.. ..+...| +||.+.. .....+.+.+||...+
T Consensus 168 Hi~G~~D~iv~~~~s~~L~~~~~~-a~vl~Hp-ggH~VP~---------------~~~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 168 HIFGETDTIVPSERSEQLAESFKD-ATVLEHP-GGHIVPN---------------KAKYKEKIADFIQSFL 221 (230)
T ss_pred EEecccceeecchHHHHHHHhcCC-CeEEecC-CCccCCC---------------chHHHHHHHHHHHHHH
Confidence 999999999999999999999885 5666666 4898875 2355666666665543
No 111
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.23 E-value=9.7e-11 Score=80.85 Aligned_cols=111 Identities=15% Similarity=0.068 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcc--------ccccceEEEeccCCCCCCcccchhhhccCCCc
Q 030264 33 LVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE--------DIAASAVLCLGYPLKGMNGAVRDELLLQITVP 104 (180)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 104 (180)
+.+.+..+.+.+.+.-+ =.+|+|+|.||.+|..++... ...++.+|+++............-...++++|
T Consensus 86 ~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~~~~~~~~~i~iP 163 (212)
T PF03959_consen 86 LDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDYQELYDEPKISIP 163 (212)
T ss_dssp -HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-GTTTT--TT---E
T ss_pred HHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhhhhhhccccCCCC
Confidence 33444444445554433 268999999999999998652 13467777776433211110001135667999
Q ss_pred EEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCcccc
Q 030264 105 IMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKI 146 (180)
Q Consensus 105 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 146 (180)
+|-|+|++|.+++++..+.+.+.+....+++.++ +||.+..
T Consensus 164 tlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~ 204 (212)
T PF03959_consen 164 TLHVIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPR 204 (212)
T ss_dssp EEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS---
T ss_pred eEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcC
Confidence 9999999999999999999998887336677776 4898775
No 112
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.21 E-value=3.7e-10 Score=84.14 Aligned_cols=121 Identities=19% Similarity=0.226 Sum_probs=69.9
Q ss_pred CcEEEEeeChhHHHHHHHhhccccccceEEEeccCCCCCCcccchhhhccCCCcEEEEeecCCCCCChHHHHHHHHHcc-
Q 030264 51 HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMK- 129 (180)
Q Consensus 51 ~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~- 129 (180)
.+|+++|||+||..++.++.+. .++++.|++..++.+.. .+....++.|+|+|.++. +.-..+...+.+...
T Consensus 228 ~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD~W~~Pl~----~~~~~~i~~P~L~InSe~--f~~~~~~~~~~~~~~~ 300 (379)
T PF03403_consen 228 SRIGLAGHSFGGATALQALRQD-TRFKAGILLDPWMFPLG----DEIYSKIPQPLLFINSES--FQWWENIFRMKKVISN 300 (379)
T ss_dssp EEEEEEEETHHHHHHHHHHHH--TT--EEEEES---TTS-----GGGGGG--S-EEEEEETT--T--HHHHHHHHTT--T
T ss_pred hheeeeecCchHHHHHHHHhhc-cCcceEEEeCCcccCCC----cccccCCCCCEEEEECcc--cCChhhHHHHHHHhcc
Confidence 3799999999999999888886 67888888785544322 233467889999998876 333344444433222
Q ss_pred -CCcEEEEEcCCCCccccccccccc----------cccchhHHHHHHHHHHHHHHHHhhc
Q 030264 130 -SLSELHLIDGGDHSFKIGKKHLQT----------MGTTQDEMEGLAVQAIAAFISKSLG 178 (180)
Q Consensus 130 -~~~~~~~~~~~~H~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~fl~~~~~ 178 (180)
....+..++|+.|.-..+-..+-+ +........+...+.+++||+++++
T Consensus 301 ~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L~ 360 (379)
T PF03403_consen 301 NKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHLG 360 (379)
T ss_dssp TS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhcC
Confidence 236788899999984443322222 1123344466678888999999875
No 113
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.21 E-value=9e-10 Score=76.85 Aligned_cols=149 Identities=21% Similarity=0.316 Sum_probs=95.0
Q ss_pred ceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc---cccccceEEEecc
Q 030264 8 AVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK---EDIAASAVLCLGY 84 (180)
Q Consensus 8 g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~---~~~~~~~~~~~~~ 84 (180)
.+.|+.++++|.. .........+ +-+...++.++...+..++.++|||+||.+|..+|.+ ....+..++++..
T Consensus 27 ~~~v~~i~~~~~~-~~~~~~~si~---~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~ 102 (229)
T PF00975_consen 27 VIGVYGIEYPGRG-DDEPPPDSIE---ELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDS 102 (229)
T ss_dssp EEEEEEECSTTSC-TTSHEESSHH---HHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESC
T ss_pred eEEEEEEecCCCC-CCCCCCCCHH---HHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecC
Confidence 4899999999984 1222223344 3444555566665666699999999999999999977 3345888988885
Q ss_pred CCCCCCcc----------c---------------ch---------------hh-----hccC---CCcEEEEeecCCCCC
Q 030264 85 PLKGMNGA----------V---------------RD---------------EL-----LLQI---TVPIMFVQGSKDGLC 116 (180)
Q Consensus 85 ~~~~~~~~----------~---------------~~---------------~~-----~~~~---~~P~l~i~g~~D~~~ 116 (180)
+.+..... . .. .. .... .+|..+.....|+..
T Consensus 103 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (229)
T PF00975_consen 103 PPPSIKERPRSREPSDEQFIEELRRIGGTPDASLEDEELLARLLRALRDDFQALENYSIRPIDKQKVPITLFYALDDPLV 182 (229)
T ss_dssp SSTTCHSCHHHHHCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTCS-TTSSSESSEEEEEEECSSSSS
T ss_pred CCCCcccchhhhhhhHHHHHHHHHHhcCCchhhhcCHHHHHHHHHHHHHHHHHHhhccCCccccCCCcEEEEecCCCccc
Confidence 43321100 0 00 00 1112 346788888888887
Q ss_pred ChH---HHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHH
Q 030264 117 PLD---KLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFI 173 (180)
Q Consensus 117 ~~~---~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl 173 (180)
... ....+.+.....++++.++| +|..+.. ++..++.+.|.+||
T Consensus 183 ~~~~~~~~~~W~~~~~~~~~~~~v~G-~H~~~l~------------~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 183 SMDRLEEADRWWDYTSGDVEVHDVPG-DHFSMLK------------PHVAEIAEKIAEWL 229 (229)
T ss_dssp SHHCGGHHCHHHGCBSSSEEEEEESS-ETTGHHS------------TTHHHHHHHHHHHH
T ss_pred cchhhhhHHHHHHhcCCCcEEEEEcC-CCcEecc------------hHHHHHHHHHhccC
Confidence 766 33346666665688888986 8987762 13566777777765
No 114
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.19 E-value=9.6e-10 Score=74.01 Aligned_cols=113 Identities=16% Similarity=0.201 Sum_probs=71.8
Q ss_pred HHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEeccCCCC---------CC------cc--cchh---h-
Q 030264 39 DVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKG---------MN------GA--VRDE---L- 97 (180)
Q Consensus 39 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~---------~~------~~--~~~~---~- 97 (180)
+.+..+.+....+.+.++|+||||..|..++.+.+ +.+ +++++.+.. .. +. +... .
T Consensus 47 ~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~~l 123 (187)
T PF05728_consen 47 AQLEQLIEELKPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIEEL 123 (187)
T ss_pred HHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhhhc
Confidence 33444444445446999999999999999998864 334 444543321 00 00 0100 1
Q ss_pred ----h--ccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHH
Q 030264 98 ----L--LQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAA 171 (180)
Q Consensus 98 ----~--~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 171 (180)
. ..-..+++++.++.|.++++..+...+ . .+...+.+|++|.|.. .++....|.+
T Consensus 124 ~~l~~~~~~~~~~~lvll~~~DEvLd~~~a~~~~---~-~~~~~i~~ggdH~f~~---------------f~~~l~~i~~ 184 (187)
T PF05728_consen 124 KALEVPYPTNPERYLVLLQTGDEVLDYREAVAKY---R-GCAQIIEEGGDHSFQD---------------FEEYLPQIIA 184 (187)
T ss_pred ceEeccccCCCccEEEEEecCCcccCHHHHHHHh---c-CceEEEEeCCCCCCcc---------------HHHHHHHHHH
Confidence 1 122458999999999999996665444 3 2445566788999875 4667778888
Q ss_pred HH
Q 030264 172 FI 173 (180)
Q Consensus 172 fl 173 (180)
|+
T Consensus 185 f~ 186 (187)
T PF05728_consen 185 FL 186 (187)
T ss_pred hh
Confidence 86
No 115
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.17 E-value=1.4e-10 Score=77.28 Aligned_cols=135 Identities=13% Similarity=0.110 Sum_probs=101.1
Q ss_pred ccCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCC-CcEEEEeeChhHHHHHHHhhc-cccccceEEE
Q 030264 4 KALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPG-HPLILAGKSMGSRVSCMVACK-EDIAASAVLC 81 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~-~~~~~~~~~~ 81 (180)
+.++||+|..++|-... .....++.+.++..-++++...++. +.+.+-|||.|+.+++.+..+ +.++|.++++
T Consensus 93 a~~~gY~vasvgY~l~~-----q~htL~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l 167 (270)
T KOG4627|consen 93 AVRRGYRVASVGYNLCP-----QVHTLEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLIL 167 (270)
T ss_pred hhhcCeEEEEeccCcCc-----ccccHHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHH
Confidence 35689999999987752 2345777788888889998887654 478889999999999999887 5678988887
Q ss_pred eccCCC---------CCCccc----------chhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCC
Q 030264 82 LGYPLK---------GMNGAV----------RDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDH 142 (180)
Q Consensus 82 ~~~~~~---------~~~~~~----------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 142 (180)
++.... +.+-.+ .......++.|+|++++++|..--.+..+.+..++. +..+..|++.+|
T Consensus 168 ~~GvY~l~EL~~te~g~dlgLt~~~ae~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~-~a~~~~f~n~~h 246 (270)
T KOG4627|consen 168 LCGVYDLRELSNTESGNDLGLTERNAESVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLR-KASFTLFKNYDH 246 (270)
T ss_pred HhhHhhHHHHhCCccccccCcccchhhhcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhh-hcceeecCCcch
Confidence 552111 000000 113456678899999999998777788888888876 489999999999
Q ss_pred cc
Q 030264 143 SF 144 (180)
Q Consensus 143 ~~ 144 (180)
.-
T Consensus 247 y~ 248 (270)
T KOG4627|consen 247 YD 248 (270)
T ss_pred hh
Confidence 83
No 116
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.17 E-value=2.7e-09 Score=73.13 Aligned_cols=138 Identities=13% Similarity=0.140 Sum_probs=81.9
Q ss_pred cCCceEEEEEeccCCCCCCCCCC---CchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEE
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAP---PKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLC 81 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~ 81 (180)
+..||+|+.+|.-.|- |.+.+. -......+++..+++|+.. .+..+++++.-|..|.+|+..+.+- .+..++.
T Consensus 54 ~~NGFhViRyDsl~Hv-GlSsG~I~eftms~g~~sL~~V~dwl~~-~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLit 129 (294)
T PF02273_consen 54 SANGFHVIRYDSLNHV-GLSSGDINEFTMSIGKASLLTVIDWLAT-RGIRRIGLIAASLSARIAYEVAADI--NLSFLIT 129 (294)
T ss_dssp HTTT--EEEE---B--------------HHHHHHHHHHHHHHHHH-TT---EEEEEETTHHHHHHHHTTTS----SEEEE
T ss_pred hhCCeEEEeccccccc-cCCCCChhhcchHHhHHHHHHHHHHHHh-cCCCcchhhhhhhhHHHHHHHhhcc--CcceEEE
Confidence 5689999999977654 333222 3333457889999999994 5777899999999999999999963 4555554
Q ss_pred ecc-------------------CCCCCCccc--------------------------chhhhccCCCcEEEEeecCCCCC
Q 030264 82 LGY-------------------PLKGMNGAV--------------------------RDELLLQITVPIMFVQGSKDGLC 116 (180)
Q Consensus 82 ~~~-------------------~~~~~~~~~--------------------------~~~~~~~~~~P~l~i~g~~D~~~ 116 (180)
... |....++.. ....++.+.+|++.+++++|.++
T Consensus 130 aVGVVnlr~TLe~al~~Dyl~~~i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV 209 (294)
T PF02273_consen 130 AVGVVNLRDTLEKALGYDYLQLPIEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWV 209 (294)
T ss_dssp ES--S-HHHHHHHHHSS-GGGS-GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS
T ss_pred EeeeeeHHHHHHHHhccchhhcchhhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccc
Confidence 221 111111110 11357788999999999999999
Q ss_pred ChHHHHHHHHHccCC-cEEEEEcCCCCcccc
Q 030264 117 PLDKLEAVRKKMKSL-SELHLIDGGDHSFKI 146 (180)
Q Consensus 117 ~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~ 146 (180)
....+.++...++++ ++++.++|+.|.+..
T Consensus 210 ~q~eV~~~~~~~~s~~~klysl~Gs~HdL~e 240 (294)
T PF02273_consen 210 KQSEVEELLDNINSNKCKLYSLPGSSHDLGE 240 (294)
T ss_dssp -HHHHHHHHTT-TT--EEEEEETT-SS-TTS
T ss_pred cHHHHHHHHHhcCCCceeEEEecCccchhhh
Confidence 999999998877655 899999999999775
No 117
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.11 E-value=3.3e-09 Score=76.95 Aligned_cols=155 Identities=15% Similarity=0.100 Sum_probs=108.9
Q ss_pred CceEEEEEeccCCCCCCCCCCCc-----------hHHHHHHHHHHHHHHHhhCCCCcEE-EEeeChhHHHHHHHhhcccc
Q 030264 7 DAVEVVTFDYPYIAGGKRKAPPK-----------AEKLVEFHTDVVKGAVAKFPGHPLI-LAGKSMGSRVSCMVACKEDI 74 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~~~ 74 (180)
.-|-|+++|-.|...|++.+... +.-.+.|+..+...+.+.+..+++. ++|-||||+-++..+..+|+
T Consensus 91 ~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd 170 (368)
T COG2021 91 ERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPD 170 (368)
T ss_pred cceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChH
Confidence 35889999999865444433311 1123567777667777888888776 99999999999999999999
Q ss_pred ccceEEEeccCCCCC------------------------------Cc-------------------------c-------
Q 030264 75 AASAVLCLGYPLKGM------------------------------NG-------------------------A------- 92 (180)
Q Consensus 75 ~~~~~~~~~~~~~~~------------------------------~~-------------------------~------- 92 (180)
++..++.++.+.... +. .
T Consensus 171 ~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~ 250 (368)
T COG2021 171 RVRRAIPIATAARLSAQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPL 250 (368)
T ss_pred HHhhhheecccccCCHHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhccccccccc
Confidence 999988866431100 00 0
Q ss_pred ------c----------------------------------------chhhhccCCCcEEEEeecCCCCCChHHHHHHHH
Q 030264 93 ------V----------------------------------------RDELLLQITVPIMFVQGSKDGLCPLDKLEAVRK 126 (180)
Q Consensus 93 ------~----------------------------------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 126 (180)
+ ..+.++.+++|+|++.-+.|.+.|++...+..+
T Consensus 251 ~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~ 330 (368)
T COG2021 251 RGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAE 330 (368)
T ss_pred CCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHH
Confidence 0 001367789999999999999999999999999
Q ss_pred HccCCcEEEEEc-CCCCc-cccccccccccccchhHHHHHHHHHHHHHHHH
Q 030264 127 KMKSLSELHLID-GGDHS-FKIGKKHLQTMGTTQDEMEGLAVQAIAAFISK 175 (180)
Q Consensus 127 ~~~~~~~~~~~~-~~~H~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 175 (180)
.++....+++++ ..||. |... .+.+...|..||+.
T Consensus 331 ~L~~~~~~~~i~S~~GHDaFL~e--------------~~~~~~~i~~fL~~ 367 (368)
T COG2021 331 ALPAAGALREIDSPYGHDAFLVE--------------SEAVGPLIRKFLAL 367 (368)
T ss_pred hccccCceEEecCCCCchhhhcc--------------hhhhhHHHHHHhhc
Confidence 988544366554 46787 4432 24455777777753
No 118
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.10 E-value=9.6e-09 Score=74.99 Aligned_cols=159 Identities=21% Similarity=0.160 Sum_probs=102.2
Q ss_pred CCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHH--HHHhhCCCCcEEEEeeChhHHHHHHHhhcc------ccccc
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVK--GAVAKFPGHPLILAGKSMGSRVSCMVACKE------DIAAS 77 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~------~~~~~ 77 (180)
+-+..|+.+|||-. -...-+..+++..+.+.-+.+ ++....+.++|+|+|-|.||.+|..++.+. +.+++
T Consensus 121 ~~~~vvvSVdYRLA--PEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~ 198 (336)
T KOG1515|consen 121 ELNCVVVSVDYRLA--PEHPFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIK 198 (336)
T ss_pred HcCeEEEecCcccC--CCCCCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceE
Confidence 45789999999986 233344555555555555554 344446667999999999999999888761 46788
Q ss_pred eEEEeccCCCCCCc------------------------------cc--ch------------hhhccCC-CcEEEEeecC
Q 030264 78 AVLCLGYPLKGMNG------------------------------AV--RD------------ELLLQIT-VPIMFVQGSK 112 (180)
Q Consensus 78 ~~~~~~~~~~~~~~------------------------------~~--~~------------~~~~~~~-~P~l~i~g~~ 112 (180)
+.+++-+.+.+... .. ++ ....... .|+|++.++.
T Consensus 199 g~ili~P~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~ 278 (336)
T KOG1515|consen 199 GQILIYPFFQGTDRTESEKQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGY 278 (336)
T ss_pred EEEEEecccCCCCCCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCc
Confidence 88886643221100 00 00 0111122 3599999999
Q ss_pred CCCCChHHHHHHHHHccC---CcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHh
Q 030264 113 DGLCPLDKLEAVRKKMKS---LSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKS 176 (180)
Q Consensus 113 D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 176 (180)
|.+.+ ....+.+.+.+ ++++..++++.|.++...+ . .+...+..+.+.+|+++.
T Consensus 279 D~L~D--~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~----~----~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 279 DVLRD--EGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDP----S----SKEAHALMDAIVEFIKSN 335 (336)
T ss_pred hhhhh--hhHHHHHHHHHcCCeEEEEEECCCeeEEEecCC----c----hhhHHHHHHHHHHHHhhc
Confidence 98874 44445555543 3666679999999886432 1 245677889999998764
No 119
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.09 E-value=2.5e-09 Score=82.21 Aligned_cols=155 Identities=17% Similarity=0.107 Sum_probs=103.4
Q ss_pred ccCCceEEEEEeccCCCCCCCCCCCchHHH---------HHHHHHHHHHHHhhC---CCCcEEEEeeChhHHHHHHHhhc
Q 030264 4 KALDAVEVVTFDYPYIAGGKRKAPPKAEKL---------VEFHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
+|+.||.|+.+|-||.. . ++ -+++.. ++|-.+.++++.+.+ +-++|++-|+|.||+++++...+
T Consensus 672 LaslGy~Vv~IDnRGS~--h-RG-lkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~ 747 (867)
T KOG2281|consen 672 LASLGYVVVFIDNRGSA--H-RG-LKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQ 747 (867)
T ss_pred hhhcceEEEEEcCCCcc--c-cc-hhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhc
Confidence 46789999999999942 1 11 112211 345555566766654 34599999999999999999999
Q ss_pred cccccceEEEeccCCC--------------CCCccc--------ch---hhhccCCCcEEEEeecCCCCCChHHHHHHHH
Q 030264 72 EDIAASAVLCLGYPLK--------------GMNGAV--------RD---ELLLQITVPIMFVQGSKDGLCPLDKLEAVRK 126 (180)
Q Consensus 72 ~~~~~~~~~~~~~~~~--------------~~~~~~--------~~---~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 126 (180)
+|..++..|. +.|+. +.++.. -. +.+..-.-..|++||=-|.-+.......+..
T Consensus 748 ~P~IfrvAIA-GapVT~W~~YDTgYTERYMg~P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs 826 (867)
T KOG2281|consen 748 YPNIFRVAIA-GAPVTDWRLYDTGYTERYMGYPDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVS 826 (867)
T ss_pred CcceeeEEec-cCcceeeeeecccchhhhcCCCccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHH
Confidence 9887766665 33433 111100 01 1223334458999999999999888877776
Q ss_pred Hcc---CCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHH
Q 030264 127 KMK---SLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISK 175 (180)
Q Consensus 127 ~~~---~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 175 (180)
++. +..++++||+-.|..-... .-.-.-..++.|+++
T Consensus 827 ~lvkagKpyeL~IfP~ERHsiR~~e------------s~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 827 ALVKAGKPYELQIFPNERHSIRNPE------------SGIYYEARLLHFLQE 866 (867)
T ss_pred HHHhCCCceEEEEccccccccCCCc------------cchhHHHHHHHHHhh
Confidence 653 3489999999999866532 234455667777765
No 120
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.06 E-value=1.3e-08 Score=72.06 Aligned_cols=156 Identities=16% Similarity=0.200 Sum_probs=101.4
Q ss_pred CCceEEEEEeccCCCCCCCCCCCc-hHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEecc
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPPK-AEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 84 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~ 84 (180)
.+.|.++-+|-||..+|.+.-+.. ..-.++++.+.+..+...+..+.++.+|-..|+.+-.++|.++|.++.++|++++
T Consensus 53 ~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~ 132 (283)
T PF03096_consen 53 LQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNP 132 (283)
T ss_dssp HTTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES-
T ss_pred hhceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEec
Confidence 367899999999987655433322 2222456666666666666777899999999999999999999999999999874
Q ss_pred CCC--------------------CCCccc----------------------------------------------c---h
Q 030264 85 PLK--------------------GMNGAV----------------------------------------------R---D 95 (180)
Q Consensus 85 ~~~--------------------~~~~~~----------------------------------------------~---~ 95 (180)
-.. ++.... | .
T Consensus 133 ~~~~~gw~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~ 212 (283)
T PF03096_consen 133 TCTAAGWMEWFYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLS 212 (283)
T ss_dssp --S---HHHHHHHHHH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----
T ss_pred CCCCccHHHHHHHHHhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccch
Confidence 211 111100 0 0
Q ss_pred hhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCC-cEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHH
Q 030264 96 ELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSL-SELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFIS 174 (180)
Q Consensus 96 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 174 (180)
.......||+|++.|+..+.. +.+.++..++.+. .++..++++|=.... +.|.++...+.-|++
T Consensus 213 ~~~~~~~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~e-------------EqP~klaea~~lFlQ 277 (283)
T PF03096_consen 213 IERPSLGCPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLE-------------EQPGKLAEAFKLFLQ 277 (283)
T ss_dssp SECTTCCS-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHH-------------H-HHHHHHHHHHHHH
T ss_pred hhcCCCCCCeEEEEecCCcch--hhHHHHHhhcCcccceEEEecccCCcccc-------------cCcHHHHHHHHHHHc
Confidence 123455799999999998875 5677788888654 788888888665555 889999999999987
Q ss_pred Hh
Q 030264 175 KS 176 (180)
Q Consensus 175 ~~ 176 (180)
..
T Consensus 278 G~ 279 (283)
T PF03096_consen 278 GM 279 (283)
T ss_dssp HT
T ss_pred cC
Confidence 53
No 121
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.06 E-value=1.8e-08 Score=71.95 Aligned_cols=138 Identities=16% Similarity=0.162 Sum_probs=90.2
Q ss_pred CCceEEEEEeccCCCCCCCC----CCCchHHHHHHHHHHHHHHHhh---C--CCCcEEEEeeChhHHHHHHHhhccc---
Q 030264 6 LDAVEVVTFDYPYIAGGKRK----APPKAEKLVEFHTDVVKGAVAK---F--PGHPLILAGKSMGSRVSCMVACKED--- 73 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~---~--~~~~i~l~G~S~Gg~~a~~~a~~~~--- 73 (180)
...|.|+++.+.|++..... .......+.+.+...++.+.+. . +..+++++|||.|++|++..+.+.+
T Consensus 30 ~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~ 109 (266)
T PF10230_consen 30 NPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLK 109 (266)
T ss_pred CCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccC
Confidence 46899999999998632222 1233444555555555554443 2 4558999999999999999999977
Q ss_pred cccceEEEeccCCCCCCcc-------------------------------------------------------------
Q 030264 74 IAASAVLCLGYPLKGMNGA------------------------------------------------------------- 92 (180)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~------------------------------------------------------------- 92 (180)
..+.+++++-+-+..+..+
T Consensus 110 ~~V~~~~lLfPTi~~ia~Sp~G~~l~~~~~~~~~~~~~~~~~~~l~~~lP~~~~~~lv~~~~~~~~~~~~~t~~~l~~~~ 189 (266)
T PF10230_consen 110 FRVKKVILLFPTIEDIAKSPNGRRLTPLLFSPPPLVWLASFLSFLLSLLPESVLRWLVRWVMGFPPPAVEATTKFLLSPR 189 (266)
T ss_pred CceeEEEEeCCccccccCCchhHHHHHHHhhccHHHHHHHHHHHHHHHCCHHHHHHHHHHHcCCChHHHHHHHHHhcCHH
Confidence 5676666643211110000
Q ss_pred ------------------cc-hhhhccC---CCcEEEEeecCCCCCChHHHHHHHHHccCC---cEEEEEcCCCCcc
Q 030264 93 ------------------VR-DELLLQI---TVPIMFVQGSKDGLCPLDKLEAVRKKMKSL---SELHLIDGGDHSF 144 (180)
Q Consensus 93 ------------------~~-~~~~~~~---~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~~~H~~ 144 (180)
.. .+.++.. ...+.+++|++|..+|.+..+++.+.++.. +++.. +|-.|.|
T Consensus 190 ~v~qaL~Ma~~Em~~I~~~d~~~~~~~~~~~~~kl~f~fg~~D~Wvp~~~~~~l~~~~~~~~~~~~v~~-~~i~HaF 265 (266)
T PF10230_consen 190 VVRQALYMARDEMREIREDDNDELIKHHNENGDKLWFYFGQNDHWVPNETRDELIERYPGHEPDVVVDE-EGIPHAF 265 (266)
T ss_pred HHHHHHHHHHHHHHHccCcchHHHHHHhccCCCEEEEEEeCCCCCCCHHHHHHHHHHcCCCCCeEEEec-CCCCCCC
Confidence 00 1112222 568999999999999999999999998832 34444 6777876
No 122
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.06 E-value=5.6e-09 Score=70.00 Aligned_cols=114 Identities=18% Similarity=0.149 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHhh-CCCCcEEEEeeChhHHHHHHHhhccccccceEEEeccCCCCCCcccchhhhccCCCcEEEEeec
Q 030264 33 LVEFHTDVVKGAVAK-FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQGS 111 (180)
Q Consensus 33 ~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 111 (180)
..+.+..+++..... .+..+|++-|+|+||.+++..+...+..+.+++....-+......+.......-..|++..||+
T Consensus 74 aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~~~~~~~~~~~~i~~~Hg~ 153 (206)
T KOG2112|consen 74 AADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGLPGWLPGVNYTPILLCHGT 153 (206)
T ss_pred HHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhccCCccccCcchhheeccc
Confidence 344445555444433 3445899999999999999999998777777776542222111111000000017899999999
Q ss_pred CCCCCChHHHHHHHHHc---cCCcEEEEEcCCCCcccc
Q 030264 112 KDGLCPLDKLEAVRKKM---KSLSELHLIDGGDHSFKI 146 (180)
Q Consensus 112 ~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~H~~~~ 146 (180)
.|+++|..-.+...+.+ ...++++.|+|.+|....
T Consensus 154 ~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~ 191 (206)
T KOG2112|consen 154 ADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSP 191 (206)
T ss_pred CCceeehHHHHHHHHHHHHcCCceeeeecCCccccccH
Confidence 99999986655554443 334889999999998664
No 123
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.04 E-value=2.2e-08 Score=69.46 Aligned_cols=169 Identities=15% Similarity=0.177 Sum_probs=106.8
Q ss_pred ccCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhh----C------CCCcEEEEeeChhHHHHHHHhhccc
Q 030264 4 KALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK----F------PGHPLILAGKSMGSRVSCMVACKED 73 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~------~~~~i~l~G~S~Gg~~a~~~a~~~~ 73 (180)
.+..||.|+++++-... ++. ...-+++...+++|+... + +..+++++|||.||-.|..+|..+.
T Consensus 69 IASHGfIVVAPQl~~~~-----~p~-~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a 142 (307)
T PF07224_consen 69 IASHGFIVVAPQLYTLF-----PPD-GQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYA 142 (307)
T ss_pred HhhcCeEEEechhhccc-----CCC-chHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhccc
Confidence 47899999999988642 121 122235555666666542 1 2348999999999999999998753
Q ss_pred --cccceEEEeccCCCCCCcccch--------hhhccCCCcEEEEeecCC-------CCCCh--HHHHHHHHHccCCcEE
Q 030264 74 --IAASAVLCLGYPLKGMNGAVRD--------ELLLQITVPIMFVQGSKD-------GLCPL--DKLEAVRKKMKSLSEL 134 (180)
Q Consensus 74 --~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~P~l~i~g~~D-------~~~~~--~~~~~~~~~~~~~~~~ 134 (180)
-.+.++|.+. |+.+.....++ ...-.+..|+++|...-- +-+.+ -+-++++..+++++-.
T Consensus 143 ~~lkfsaLIGiD-PV~G~~k~~~t~P~iLty~p~SF~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eCk~p~~h 221 (307)
T PF07224_consen 143 TSLKFSALIGID-PVAGTSKGKQTPPPILTYVPQSFDLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNECKPPCAH 221 (307)
T ss_pred ccCchhheeccc-ccCCCCCCCCCCCCeeecCCcccccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhhccccee
Confidence 4577777766 44433221111 122346689999876544 22222 3557788888777777
Q ss_pred EEEcCCCCccccccccc-----------cccccchhHHHHHHHHHHHHHHHHhhcC
Q 030264 135 HLIDGGDHSFKIGKKHL-----------QTMGTTQDEMEGLAVQAIAAFISKSLGE 179 (180)
Q Consensus 135 ~~~~~~~H~~~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 179 (180)
.+..+.||.=+.+.... ..+......+.+-+--.+..||+..++.
T Consensus 222 fV~~dYGHmDmLDD~~~g~~G~~~~clCkng~~pr~pMRr~vgGivVAFL~a~l~~ 277 (307)
T PF07224_consen 222 FVAKDYGHMDMLDDDTPGIIGKLSYCLCKNGKSPRDPMRRFVGGIVVAFLKAYLEG 277 (307)
T ss_pred eeecccccccccccCccccccceeeEeecCCCCcchHHHHhhhhhHHHHHHHHHcC
Confidence 77778999865544321 1133445666677777888999887753
No 124
>PRK04940 hypothetical protein; Provisional
Probab=99.01 E-value=3.1e-08 Score=65.73 Aligned_cols=104 Identities=13% Similarity=0.093 Sum_probs=71.4
Q ss_pred CcEEEEeeChhHHHHHHHhhccccccceEEEeccCCCCCC---------c---ccchhhhcc--CCC--cEEEEeecCCC
Q 030264 51 HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMN---------G---AVRDELLLQ--ITV--PIMFVQGSKDG 114 (180)
Q Consensus 51 ~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~---------~---~~~~~~~~~--~~~--P~l~i~g~~D~ 114 (180)
+++.++|+|+||+.|..++.++. +++|++ ++.+.+.. . .+..+.+.. ++. ..+++..+.|.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--~~aVLi-NPAv~P~~~L~~~ig~~~~y~~~~~~h~~eL~~~~p~r~~vllq~gDE 136 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--IRQVIF-NPNLFPEENMEGKIDRPEEYADIATKCVTNFREKNRDRCLVILSRNDE 136 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--CCEEEE-CCCCChHHHHHHHhCCCcchhhhhHHHHHHhhhcCcccEEEEEeCCCc
Confidence 47999999999999999999964 455554 43332110 0 111111111 233 35999999999
Q ss_pred CCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHH
Q 030264 115 LCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISK 175 (180)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 175 (180)
+.+...+.+.+... .++.+.+|++|.|.. .++....|.+|++.
T Consensus 137 vLDyr~a~~~y~~~---y~~~v~~GGdH~f~~---------------fe~~l~~I~~F~~~ 179 (180)
T PRK04940 137 VLDSQRTAEELHPY---YEIVWDEEQTHKFKN---------------ISPHLQRIKAFKTL 179 (180)
T ss_pred ccCHHHHHHHhccC---ceEEEECCCCCCCCC---------------HHHHHHHHHHHHhc
Confidence 99998887766432 268899999999975 46788889999853
No 125
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.00 E-value=1.2e-08 Score=70.37 Aligned_cols=124 Identities=15% Similarity=0.089 Sum_probs=78.7
Q ss_pred CCceEEEEEeccCCC------CCCCCCCCchHHHHHHHHHHHHHHHhhCC--CCcEEEEeeChhHHHHHHHhhccccccc
Q 030264 6 LDAVEVVTFDYPYIA------GGKRKAPPKAEKLVEFHTDVVKGAVAKFP--GHPLILAGKSMGSRVSCMVACKEDIAAS 77 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~~~~~~ 77 (180)
++||.|+.++..... +...............+..+++++..+++ ..+|.+.|+|.||.++..++..+|+.+.
T Consensus 44 ~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~fa 123 (220)
T PF10503_consen 44 REGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFA 123 (220)
T ss_pred cCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccce
Confidence 468999999864321 00000000011123456666777777654 4599999999999999999999999999
Q ss_pred eEEEeccCCCCCC-c-------------ccch---h---hh-ccCCCcEEEEeecCCCCCChHHHHHHHHHcc
Q 030264 78 AVLCLGYPLKGMN-G-------------AVRD---E---LL-LQITVPIMFVQGSKDGLCPLDKLEAVRKKMK 129 (180)
Q Consensus 78 ~~~~~~~~~~~~~-~-------------~~~~---~---~~-~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 129 (180)
++...+....+.. . .... . .. ..-..|++++||+.|..+.+.+..++.+++.
T Consensus 124 a~a~~sG~~~~~a~~~~~a~~~m~~g~~~~p~~~~~a~~~~g~~~~~P~~v~hG~~D~tV~~~n~~~~~~q~~ 196 (220)
T PF10503_consen 124 AVAVVSGVPYGCAASGASALSAMRSGPRPAPAAAWGARSDAGAYPGYPRIVFHGTADTTVNPQNADQLVAQWL 196 (220)
T ss_pred EEEeecccccccccCcccHHHHhhCCCCCChHHHHHhhhhccCCCCCCEEEEecCCCCccCcchHHHHHHHHH
Confidence 8877653221100 0 0000 0 00 1123599999999999999998888877754
No 126
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.96 E-value=7.4e-09 Score=78.09 Aligned_cols=77 Identities=16% Similarity=0.194 Sum_probs=57.4
Q ss_pred CceEEEEEeccCCCCCCCCCC---CchHHHHHHHHHHHHHHHhh--CCCCcEEEEeeChhHHHHHHHhhccccccceEEE
Q 030264 7 DAVEVVTFDYPYIAGGKRKAP---PKAEKLVEFHTDVVKGAVAK--FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLC 81 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~ 81 (180)
..|+|+++||+|++ .+..+ .......+++.+.++++... ++.++++++||||||.+|..++...+.++.++++
T Consensus 72 ~d~nVI~VDw~g~g--~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItg 149 (442)
T TIGR03230 72 PSANVIVVDWLSRA--QQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITG 149 (442)
T ss_pred CCCEEEEEECCCcC--CCCCccccccHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEE
Confidence 36999999999984 33222 12223345666777776543 3456999999999999999999988889999999
Q ss_pred eccC
Q 030264 82 LGYP 85 (180)
Q Consensus 82 ~~~~ 85 (180)
+++.
T Consensus 150 LDPA 153 (442)
T TIGR03230 150 LDPA 153 (442)
T ss_pred EcCC
Confidence 8853
No 127
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.96 E-value=3.5e-09 Score=75.91 Aligned_cols=78 Identities=13% Similarity=0.098 Sum_probs=56.9
Q ss_pred CceEEEEEeccCCCCCCCCCCC---chHHHHHHHHHHHHHHHhh--CCCCcEEEEeeChhHHHHHHHhhccccccceEEE
Q 030264 7 DAVEVVTFDYPYIAGGKRKAPP---KAEKLVEFHTDVVKGAVAK--FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLC 81 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~ 81 (180)
.+|+|+++||++. +....+. ......+++...++.+.+. .+.++++++||||||.++..++.+.+.++.+++.
T Consensus 65 ~~~nVi~vD~~~~--~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~ 142 (275)
T cd00707 65 GDYNVIVVDWGRG--ANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITG 142 (275)
T ss_pred CCCEEEEEECccc--cccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEE
Confidence 5899999999986 2211111 1122235666677777665 3456899999999999999999998889999999
Q ss_pred eccCC
Q 030264 82 LGYPL 86 (180)
Q Consensus 82 ~~~~~ 86 (180)
+.+..
T Consensus 143 LDPa~ 147 (275)
T cd00707 143 LDPAG 147 (275)
T ss_pred ecCCc
Confidence 87543
No 128
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.94 E-value=6.8e-08 Score=68.16 Aligned_cols=130 Identities=19% Similarity=0.267 Sum_probs=89.2
Q ss_pred chHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccc-----cccceEEEeccCCCCCCcccc---------
Q 030264 29 KAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED-----IAASAVLCLGYPLKGMNGAVR--------- 94 (180)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~-----~~~~~~~~~~~~~~~~~~~~~--------- 94 (180)
........+..++.++...+..+++-++||||||..++.++..+. +.+..++.++.|+.+......
T Consensus 81 ~~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~ 160 (255)
T PF06028_consen 81 NYKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNK 160 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CST
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcc
Confidence 344556788888999999999999999999999999999887731 368999999988774422110
Q ss_pred ------hh----hh----ccC--CCcEEEEeec------CCCCCChHHHHHHHHHccCC---cEEEEEcC--CCCc-ccc
Q 030264 95 ------DE----LL----LQI--TVPIMFVQGS------KDGLCPLDKLEAVRKKMKSL---SELHLIDG--GDHS-FKI 146 (180)
Q Consensus 95 ------~~----~~----~~~--~~P~l~i~g~------~D~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~H~-~~~ 146 (180)
.+ .+ ..+ .+.+|-|.|+ .|..+|...+..+...+..+ .+-.++.| +.|. ++.
T Consensus 161 ~gp~~~~~~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~Lhe 240 (255)
T PF06028_consen 161 NGPKSMTPMYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHE 240 (255)
T ss_dssp T-BSS--HHHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGC
T ss_pred cCCcccCHHHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCC
Confidence 00 01 111 3569999998 78999999998888787654 45556655 5788 442
Q ss_pred ccccccccccchhHHHHHHHHHHHHHH
Q 030264 147 GKKHLQTMGTTQDEMEGLAVQAIAAFI 173 (180)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~i~~fl 173 (180)
-.++.+.|.+||
T Consensus 241 ---------------N~~V~~~I~~FL 252 (255)
T PF06028_consen 241 ---------------NPQVDKLIIQFL 252 (255)
T ss_dssp ---------------CHHHHHHHHHHH
T ss_pred ---------------CHHHHHHHHHHh
Confidence 246778888887
No 129
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.94 E-value=6e-08 Score=73.31 Aligned_cols=58 Identities=19% Similarity=0.276 Sum_probs=43.8
Q ss_pred hHHHHHHHHHHHHHHHhhCCCC-cEEEEeeChhHHHHHHHhhccccccceEEEeccCCC
Q 030264 30 AEKLVEFHTDVVKGAVAKFPGH-PLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 87 (180)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~ 87 (180)
..+........+..+....+.. +..++|-|.||..++++|+..|..+.-+++.+.|+.
T Consensus 118 l~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPls 176 (581)
T PF11339_consen 118 LEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLS 176 (581)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCcc
Confidence 3333444455556666655544 899999999999999999999999999988776643
No 130
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.92 E-value=1.5e-07 Score=71.12 Aligned_cols=106 Identities=16% Similarity=0.150 Sum_probs=68.6
Q ss_pred HHHHHHHhhCC----CCcEEEEeeChhHHHHHHHhhccccccceEEEeccCCCCCC-----cccchhhhcc-----CCCc
Q 030264 39 DVVKGAVAKFP----GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMN-----GAVRDELLLQ-----ITVP 104 (180)
Q Consensus 39 ~~~~~~~~~~~----~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-----~~~P 104 (180)
+++-++.+.+. .++.+|+|+||||..|+.++.++|+.+.++++.+..+.-.. .....+.+.+ ....
T Consensus 272 eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~~~~~~~~~l~~~l~~~~~~~~~lr 351 (411)
T PRK10439 272 ELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPHRGGQQEGVLLEQLKAGEVSARGLR 351 (411)
T ss_pred HHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCCccCCchhHHHHHHHhcccCCCCce
Confidence 33444444432 34789999999999999999999999999999885542111 0001111211 2235
Q ss_pred EEEEeecCCCCCChHHHHHHHHHccC---CcEEEEEcCCCCcccc
Q 030264 105 IMFVQGSKDGLCPLDKLEAVRKKMKS---LSELHLIDGGDHSFKI 146 (180)
Q Consensus 105 ~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~ 146 (180)
+++-+|+.|..+ .+..+++.+.+.. ++++.+++| ||.+..
T Consensus 352 ~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~G-GHd~~~ 394 (411)
T PRK10439 352 IVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDG-GHDALC 394 (411)
T ss_pred EEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCC-CcCHHH
Confidence 777789888544 3455666666543 378889987 798754
No 131
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.85 E-value=7.4e-08 Score=67.86 Aligned_cols=153 Identities=16% Similarity=0.189 Sum_probs=105.6
Q ss_pred ceEEEEEeccCCCCCCCCCCCc-hHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEeccCC
Q 030264 8 AVEVVTFDYPYIAGGKRKAPPK-AEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 86 (180)
Q Consensus 8 g~~v~~~d~~g~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~ 86 (180)
.|-++-+|-||+.+|.+.-+.. ..-.++++.+.+-.+...+.-+.++-+|-..|+.|-.++|..+|+++-++|++++-.
T Consensus 78 ~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~ 157 (326)
T KOG2931|consen 78 HFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDP 157 (326)
T ss_pred heEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCC
Confidence 3899999999987665433322 122346666666666666777789999999999999999999999999999977311
Q ss_pred C--------------------CCCccc----------------------------------------------c------
Q 030264 87 K--------------------GMNGAV----------------------------------------------R------ 94 (180)
Q Consensus 87 ~--------------------~~~~~~----------------------------------------------~------ 94 (180)
. ++.+.. |
T Consensus 158 ~a~gwiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~ 237 (326)
T KOG2931|consen 158 CAKGWIEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIE 237 (326)
T ss_pred CCchHHHHHHHHHHHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCcccc
Confidence 0 000000 0
Q ss_pred -hhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCC-cEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHH
Q 030264 95 -DELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSL-SELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAF 172 (180)
Q Consensus 95 -~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~f 172 (180)
......++||+|++.|++.+.+ +.+.++-.++.+. +.+..+.++|-.... +.|.++.+.+.-|
T Consensus 238 r~~~~~tlkc~vllvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e-------------~qP~kl~ea~~~F 302 (326)
T KOG2931|consen 238 RPKLGTTLKCPVLLVVGDNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQE-------------EQPGKLAEAFKYF 302 (326)
T ss_pred CCCcCccccccEEEEecCCCchh--hhhhhhhcccCcccceEEEEcccCCcccc-------------cCchHHHHHHHHH
Confidence 0011245699999999998876 4555555565533 777778787666554 5678888888888
Q ss_pred HHH
Q 030264 173 ISK 175 (180)
Q Consensus 173 l~~ 175 (180)
++.
T Consensus 303 lqG 305 (326)
T KOG2931|consen 303 LQG 305 (326)
T ss_pred Hcc
Confidence 764
No 132
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.81 E-value=3.3e-08 Score=69.76 Aligned_cols=89 Identities=16% Similarity=0.111 Sum_probs=64.0
Q ss_pred HHHHHHHH-HHHhhCC--CCcEEEEeeChhHHHHHHHhhccccccceEEEeccCCCCCCcccchhhhcc-CCCcEEEEee
Q 030264 35 EFHTDVVK-GAVAKFP--GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVRDELLLQ-ITVPIMFVQG 110 (180)
Q Consensus 35 ~~~~~~~~-~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~l~i~g 110 (180)
....+++. .+.++++ ..+|.++|.|+||..++.++.++|..+++.+.++..... -..++. -++|+.++|+
T Consensus 250 ~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~------v~lv~~lk~~piWvfhs 323 (387)
T COG4099 250 IEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDR------VYLVRTLKKAPIWVFHS 323 (387)
T ss_pred HHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCch------hhhhhhhccCceEEEEe
Confidence 33444444 4555544 449999999999999999999999999999887743221 111222 3579999999
Q ss_pred cCCCCCChHHHHHHHHHcc
Q 030264 111 SKDGLCPLDKLEAVRKKMK 129 (180)
Q Consensus 111 ~~D~~~~~~~~~~~~~~~~ 129 (180)
.+|+++|.+++.-.++.++
T Consensus 324 ~dDkv~Pv~nSrv~y~~lk 342 (387)
T COG4099 324 SDDKVIPVSNSRVLYERLK 342 (387)
T ss_pred cCCCccccCcceeehHHHH
Confidence 9999999988766655543
No 133
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.80 E-value=6.9e-08 Score=67.21 Aligned_cols=83 Identities=20% Similarity=0.305 Sum_probs=57.4
Q ss_pred CCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhC-----CCCcEEEEeeChhHHHHHHHhhcc---ccccc
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF-----PGHPLILAGKSMGSRVSCMVACKE---DIAAS 77 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~a~~~---~~~~~ 77 (180)
...+.++++|+.... ............+.+.+.++.+.+.+ +.++|+++||||||.++..++... +..++
T Consensus 37 ~~~~d~ft~df~~~~--s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~ 114 (225)
T PF07819_consen 37 SSHFDFFTVDFNEEL--SAFHGRTLQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVK 114 (225)
T ss_pred ccceeEEEeccCccc--cccccccHHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEE
Confidence 346889999988742 11122223333455566666665554 566999999999999998888763 34799
Q ss_pred eEEEeccCCCCCC
Q 030264 78 AVLCLGYPLKGMN 90 (180)
Q Consensus 78 ~~~~~~~~~~~~~ 90 (180)
.++.++.|..+.+
T Consensus 115 ~iitl~tPh~g~~ 127 (225)
T PF07819_consen 115 TIITLGTPHRGSP 127 (225)
T ss_pred EEEEEcCCCCCcc
Confidence 9999998877554
No 134
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.77 E-value=2.8e-08 Score=75.29 Aligned_cols=84 Identities=7% Similarity=-0.011 Sum_probs=62.5
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcccc----ccceEE
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI----AASAVL 80 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~----~~~~~~ 80 (180)
.+.||.+ ..|++|++..- +.........+++.+.++.+.+..+.+++.++||||||.++..++..++. .|+.+|
T Consensus 118 ~~~GY~~-~~dL~g~gYDw-R~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I 195 (440)
T PLN02733 118 IKWGYKE-GKTLFGFGYDF-RQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWI 195 (440)
T ss_pred HHcCCcc-CCCcccCCCCc-cccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEE
Confidence 4567755 78999885221 22333455668888888888887778899999999999999999987654 478888
Q ss_pred EeccCCCCCC
Q 030264 81 CLGYPLKGMN 90 (180)
Q Consensus 81 ~~~~~~~~~~ 90 (180)
+++.|+.+..
T Consensus 196 ~la~P~~Gs~ 205 (440)
T PLN02733 196 AIAAPFQGAP 205 (440)
T ss_pred EECCCCCCCc
Confidence 9888876543
No 135
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.67 E-value=4.6e-07 Score=65.45 Aligned_cols=105 Identities=20% Similarity=0.265 Sum_probs=72.8
Q ss_pred CCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhC---CCCcEEEEeeChhHHHHHHHhhcccc----ccce
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVACKEDI----AASA 78 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~----~~~~ 78 (180)
..|-+|+.++|||. |.|.+....+++..+...++++++++. ..++|++.|||+||.++..++.++.. .++=
T Consensus 169 ~~~aNvl~fNYpGV--g~S~G~~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~ 246 (365)
T PF05677_consen 169 ELGANVLVFNYPGV--GSSTGPPSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRW 246 (365)
T ss_pred HcCCcEEEECCCcc--ccCCCCCCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeE
Confidence 35789999999999 666666678999999999999998743 23589999999999999987766422 2332
Q ss_pred EEEeccCCCCC--------------------CcccchhhhccCCCcEEEEeecC
Q 030264 79 VLCLGYPLKGM--------------------NGAVRDELLLQITVPIMFVQGSK 112 (180)
Q Consensus 79 ~~~~~~~~~~~--------------------~~~~~~~~~~~~~~P~l~i~g~~ 112 (180)
+++..-.+... .+.-..+...++.||-+|+++.+
T Consensus 247 ~~ikDRsfssl~~vas~~~~~~~~~l~~l~gWnidS~K~s~~l~cpeIii~~~d 300 (365)
T PF05677_consen 247 FLIKDRSFSSLAAVASQFFGPIGKLLIKLLGWNIDSAKNSEKLQCPEIIIYGVD 300 (365)
T ss_pred EEEecCCcchHHHHHHHHHHHHHHHHHHHhccCCCchhhhccCCCCeEEEeccc
Confidence 33322111100 01112345677889999999874
No 136
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.66 E-value=5.1e-07 Score=66.73 Aligned_cols=113 Identities=16% Similarity=0.177 Sum_probs=88.2
Q ss_pred CCCcEEEEeeChhHHHHHHHhhccccccceEEEeccCCCCCCc---------------------------cc--------
Q 030264 49 PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNG---------------------------AV-------- 93 (180)
Q Consensus 49 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~---------------------------~~-------- 93 (180)
..+++++.|.|-=|..++..|.. +++|.+++=+..++..+.. ..
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~-D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L 248 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAV-DPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKL 248 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhcc-CcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHH
Confidence 45699999999999999999995 5788888754333221100 00
Q ss_pred -----chhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHH
Q 030264 94 -----RDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQA 168 (180)
Q Consensus 94 -----~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (180)
+.....+++.|-++|.|.+|++..++...-++..+++...+..+|+++|.... ..+...
T Consensus 249 ~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~----------------~~~~~~ 312 (367)
T PF10142_consen 249 MQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG----------------SDVVQS 312 (367)
T ss_pred HHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch----------------HHHHHH
Confidence 11245677999999999999999999999999999988999999999999764 567777
Q ss_pred HHHHHHHhhc
Q 030264 169 IAAFISKSLG 178 (180)
Q Consensus 169 i~~fl~~~~~ 178 (180)
+..|+.....
T Consensus 313 l~~f~~~~~~ 322 (367)
T PF10142_consen 313 LRAFYNRIQN 322 (367)
T ss_pred HHHHHHHHHc
Confidence 8888877654
No 137
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.66 E-value=4e-07 Score=64.83 Aligned_cols=122 Identities=17% Similarity=0.139 Sum_probs=78.4
Q ss_pred CCcEEEEeeChhHHHHHHHhhccccccceEEEeccCCCCCCcccchhhhccCCCcEEEEeecCCCCCChHHHHHHHHHcc
Q 030264 50 GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMK 129 (180)
Q Consensus 50 ~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 129 (180)
-.++.++|||+||..++...+.+. .+++.|++..++.+. +.....+++.|+++|.-++=. -.++...+.+..+
T Consensus 240 ~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~WM~Pl----~~~~~~~arqP~~finv~~fQ--~~en~~vmKki~~ 312 (399)
T KOG3847|consen 240 TSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAWMFPL----DQLQYSQARQPTLFINVEDFQ--WNENLLVMKKIES 312 (399)
T ss_pred hhhhhheeccccchhhhhhhcccc-ceeeeeeeeeeeccc----chhhhhhccCCeEEEEccccc--chhHHHHHHhhhC
Confidence 347999999999999888888764 455555555333222 245577889999999855432 2355555655554
Q ss_pred CC--cEEEEEcCCCCccccccccccc----------cccchhHHHHHHHHHHHHHHHHhhc
Q 030264 130 SL--SELHLIDGGDHSFKIGKKHLQT----------MGTTQDEMEGLAVQAIAAFISKSLG 178 (180)
Q Consensus 130 ~~--~~~~~~~~~~H~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~fl~~~~~ 178 (180)
.+ -.+.++.|+-|.-..+.+...+ +....-+..+...+..++||+++++
T Consensus 313 ~n~g~~~it~~GsVHqnfsDfpfv~p~~i~k~f~~kg~~dpy~~~~~~~r~slaFLq~h~d 373 (399)
T KOG3847|consen 313 QNEGNHVITLDGSVHQNFSDFPFVTPNWIGKVFKVKGETDPYEAMQIAIRASLAFLQKHLD 373 (399)
T ss_pred CCccceEEEEccceecccccCccccHHHHHHHhccCCCCChHHHHHHHHHHHHHHHHhhhh
Confidence 33 5777888888874333222211 2233345567778888999998764
No 138
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.65 E-value=2.8e-08 Score=71.56 Aligned_cols=112 Identities=23% Similarity=0.221 Sum_probs=78.0
Q ss_pred ccCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhh--CCCCcEEEEeeChhHHHHHHHhhccccccceEEE
Q 030264 4 KALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK--FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLC 81 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~ 81 (180)
.++.||.|+-++.||+. | +...+...+....+..++++.+.. +..+.|++.|+|.||.-+..+|..+| .++++|+
T Consensus 264 P~~lgYsvLGwNhPGFa-g-STG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YP-dVkavvL 340 (517)
T KOG1553|consen 264 PAQLGYSVLGWNHPGFA-G-STGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYP-DVKAVVL 340 (517)
T ss_pred hHHhCceeeccCCCCcc-c-cCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCC-CceEEEe
Confidence 35679999999999995 3 333333333445666666666654 55678999999999999999999986 5899998
Q ss_pred eccC-------CCCCCccc---------------chhhhccCCCcEEEEeecCCCCCCh
Q 030264 82 LGYP-------LKGMNGAV---------------RDELLLQITVPIMFVQGSKDGLCPL 118 (180)
Q Consensus 82 ~~~~-------~~~~~~~~---------------~~~~~~~~~~P~l~i~g~~D~~~~~ 118 (180)
.+.- +..++..+ .++.+...+.|+.+|.-.+|.++..
T Consensus 341 DAtFDDllpLAl~rMP~~~~giV~~aiRnh~NLnnaell~ry~GPi~lIRRt~dEIitt 399 (517)
T KOG1553|consen 341 DATFDDLLPLALFRMPTFFSGIVEHAIRNHMNLNNAELLARYKGPIRLIRRTQDEIITT 399 (517)
T ss_pred ecchhhhhhHHhhhchHHHHHHHHHHHHHhcccchHHHHHhhcCchhHhhhhhHhhhhc
Confidence 6521 11222222 1245667788999998888877643
No 139
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.64 E-value=2.8e-07 Score=65.24 Aligned_cols=108 Identities=18% Similarity=0.226 Sum_probs=67.6
Q ss_pred HHHHHHHHhhCCCC--cEEEEeeChhHHHHHHHhhccccccceEEEeccCCCCC--------Ccccch----h-----hh
Q 030264 38 TDVVKGAVAKFPGH--PLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGM--------NGAVRD----E-----LL 98 (180)
Q Consensus 38 ~~~~~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~--------~~~~~~----~-----~~ 98 (180)
.+++.++.+.+... +.+++|+||||..|+.++.++|+.+.+++++++.+... ...+.. . ..
T Consensus 100 ~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 179 (251)
T PF00756_consen 100 EELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPSPSLWGPSDDEAWKENDPFDLIKALSQ 179 (251)
T ss_dssp THHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETTHCHHHHSTCGHHGGCHHHHHHHHHHH
T ss_pred ccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccccccccCcCCcHHhhhccHHHHhhhhhc
Confidence 35556666666532 37999999999999999999999999999988432211 111101 0 12
Q ss_pred ccCCCcEEEEeecCCCCCCh----------HHHHHHHHHcc---CCcEEEEEcCCCCcccc
Q 030264 99 LQITVPIMFVQGSKDGLCPL----------DKLEAVRKKMK---SLSELHLIDGGDHSFKI 146 (180)
Q Consensus 99 ~~~~~P~l~i~g~~D~~~~~----------~~~~~~~~~~~---~~~~~~~~~~~~H~~~~ 146 (180)
+.-..++++..|+.|..... ....++.+.+. ....+..++ ++|.+..
T Consensus 180 ~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-G~H~~~~ 239 (251)
T PF00756_consen 180 KKKPLRIYLDVGTKDEFGGWEDSAQILQFLANNRELAQLLKAKGIPHTYHVFP-GGHDWAY 239 (251)
T ss_dssp TTSEEEEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHHHCCCEECTTESEEEH-SESSHHH
T ss_pred ccCCCeEEEEeCCCCcccccccCHHHHHHHHHhHhhHHHHHHcCCCceEEEec-Cccchhh
Confidence 33456788889999974321 12223333333 226778888 4787654
No 140
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.62 E-value=1.1e-06 Score=67.92 Aligned_cols=76 Identities=14% Similarity=-0.017 Sum_probs=59.2
Q ss_pred ccCCceEEEEEeccCCCCCCCCCC-CchHH-HHHHHHHHHHHHHhh-CCCCcEEEEeeChhHHHHHHHhhccccccceEE
Q 030264 4 KALDAVEVVTFDYPYIAGGKRKAP-PKAEK-LVEFHTDVVKGAVAK-FPGHPLILAGKSMGSRVSCMVACKEDIAASAVL 80 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~~~-~~~~~-~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~ 80 (180)
.+++||.|+..|.||.+ .|.+. ..... -.+|..+.|+|+... +.+.+|+.+|.|++|...+.+|+..|+.+++++
T Consensus 76 ~aa~GYavV~qDvRG~~--~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~ 153 (563)
T COG2936 76 FAAQGYAVVNQDVRGRG--GSEGVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIA 153 (563)
T ss_pred eecCceEEEEecccccc--cCCcccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeec
Confidence 57899999999999984 33332 21222 357788888888773 566799999999999999999999888888776
Q ss_pred E
Q 030264 81 C 81 (180)
Q Consensus 81 ~ 81 (180)
-
T Consensus 154 p 154 (563)
T COG2936 154 P 154 (563)
T ss_pred c
Confidence 5
No 141
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.54 E-value=3e-07 Score=73.87 Aligned_cols=65 Identities=17% Similarity=0.158 Sum_probs=46.8
Q ss_pred cCCceEEEEEeccCCCCCCCCCC--------------------------CchHHHHHHHHHHHHHHH------hh-----
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAP--------------------------PKAEKLVEFHTDVVKGAV------AK----- 47 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~--------------------------~~~~~~~~~~~~~~~~~~------~~----- 47 (180)
+++||+|+++|+|||+ .+... ..+.+...|+..+...+. ..
T Consensus 473 a~~Gy~VIaiDlpGHG--~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~ 550 (792)
T TIGR03502 473 AAAGVATIAIDHPLHG--ARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGIN 550 (792)
T ss_pred HhCCcEEEEeCCCCCC--ccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhccccccccccccc
Confidence 4579999999999995 33111 133445566666666665 22
Q ss_pred -CCCCcEEEEeeChhHHHHHHHhhc
Q 030264 48 -FPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 48 -~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
++..+++++||||||.++..++..
T Consensus 551 ~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 551 VIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CCCCCcEEEEecCHHHHHHHHHHHh
Confidence 455699999999999999999986
No 142
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.52 E-value=1.2e-06 Score=65.49 Aligned_cols=162 Identities=12% Similarity=0.010 Sum_probs=111.8
Q ss_pred ccCCceEEEEEeccCCCCCCCC---C---CCchH------HHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc
Q 030264 4 KALDAVEVVTFDYPYIAGGKRK---A---PPKAE------KLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~---~---~~~~~------~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
++.+||.|=.-+.||...++.. . ...+. -...|+.+.++.+...-..+++..+|||.|+......++.
T Consensus 102 LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~ 181 (403)
T KOG2624|consen 102 LADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSE 181 (403)
T ss_pred HHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcc
Confidence 3678999999999994311111 0 11111 1256889999999988778899999999999999988888
Q ss_pred ccc---ccceEEEeccCCCCC--------------------------Cccc-----------------------------
Q 030264 72 EDI---AASAVLCLGYPLKGM--------------------------NGAV----------------------------- 93 (180)
Q Consensus 72 ~~~---~~~~~~~~~~~~~~~--------------------------~~~~----------------------------- 93 (180)
+|. +|+..+++++..... .+.+
T Consensus 182 ~p~~~~kI~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~ 261 (403)
T KOG2624|consen 182 RPEYNKKIKSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLF 261 (403)
T ss_pred cchhhhhhheeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHH
Confidence 643 577777766432100 0000
Q ss_pred --------------------------------------------------------------chhhhccCCCcEEEEeec
Q 030264 94 --------------------------------------------------------------RDELLLQITVPIMFVQGS 111 (180)
Q Consensus 94 --------------------------------------------------------------~~~~~~~~~~P~l~i~g~ 111 (180)
+.-.+.++.+|+.+.+|+
T Consensus 262 ~~~G~~~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~ 341 (403)
T KOG2624|consen 262 LLVGWNSNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGD 341 (403)
T ss_pred HHcCcchHhhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecC
Confidence 001456678999999999
Q ss_pred CCCCCChHHHHHHHHHccCCcE--EEEEcCCCCc-cccccccccccccchhHHHHHHHHHHHHHHHHh
Q 030264 112 KDGLCPLDKLEAVRKKMKSLSE--LHLIDGGDHS-FKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKS 176 (180)
Q Consensus 112 ~D~~~~~~~~~~~~~~~~~~~~--~~~~~~~~H~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 176 (180)
+|.+++++++..+...+..... .+.+++-+|. |.... +..+.+++.|++.++..
T Consensus 342 ~D~l~~~~DV~~~~~~~~~~~~~~~~~~~~ynHlDFi~g~-----------da~~~vy~~vi~~~~~~ 398 (403)
T KOG2624|consen 342 NDWLADPEDVLILLLVLPNSVIKYIVPIPEYNHLDFIWGL-----------DAKEEVYDPVIERLRLF 398 (403)
T ss_pred CcccCCHHHHHHHHHhcccccccccccCCCccceeeeecc-----------CcHHHHHHHHHHHHHhh
Confidence 9999999999988877764433 2226788888 44432 56788888888888754
No 143
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.52 E-value=5e-08 Score=70.23 Aligned_cols=71 Identities=23% Similarity=0.405 Sum_probs=56.7
Q ss_pred hhccCC-CcEEEEeecCCCCCChHHHHHHHHHccC-CcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHH
Q 030264 97 LLLQIT-VPIMFVQGSKDGLCPLDKLEAVRKKMKS-LSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFIS 174 (180)
Q Consensus 97 ~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 174 (180)
.+..+. +|+|+++|+.|..+|......+++.... +.+..++++++|....... ....+.+..+.+|+.
T Consensus 226 ~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~----------~~~~~~~~~~~~f~~ 295 (299)
T COG1073 226 DAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNP----------PAVEQALDKLAEFLE 295 (299)
T ss_pred hHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCcc----------HHHHHHHHHHHHHHH
Confidence 344555 7999999999999999999999988876 6788889999998664221 334578999999998
Q ss_pred Hhh
Q 030264 175 KSL 177 (180)
Q Consensus 175 ~~~ 177 (180)
+.+
T Consensus 296 ~~l 298 (299)
T COG1073 296 RHL 298 (299)
T ss_pred Hhc
Confidence 875
No 144
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.51 E-value=2.8e-06 Score=73.05 Aligned_cols=136 Identities=12% Similarity=0.050 Sum_probs=84.2
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc---cccccceEEE
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK---EDIAASAVLC 81 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~---~~~~~~~~~~ 81 (180)
...++.|+.++.+|++ .........+.+.+++.+.++. ..+..++.++|||+||.++..+|.+ .+..+..+++
T Consensus 1091 l~~~~~v~~~~~~g~~-~~~~~~~~l~~la~~~~~~i~~---~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l 1166 (1296)
T PRK10252 1091 LDPQWSIYGIQSPRPD-GPMQTATSLDEVCEAHLATLLE---QQPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGL 1166 (1296)
T ss_pred cCCCCcEEEEECCCCC-CCCCCCCCHHHHHHHHHHHHHh---hCCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEE
Confidence 4567999999999984 2222223444444444444433 2344589999999999999999986 4567778777
Q ss_pred eccCCCCC-----------Cc-------------------ccch-------------------hhhccCCCcEEEEeecC
Q 030264 82 LGYPLKGM-----------NG-------------------AVRD-------------------ELLLQITVPIMFVQGSK 112 (180)
Q Consensus 82 ~~~~~~~~-----------~~-------------------~~~~-------------------~~~~~~~~P~l~i~g~~ 112 (180)
++...... .. .... .....+.+|++++.++.
T Consensus 1167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1246 (1296)
T PRK10252 1167 LDTWPPETQNWREKEANGLDPEVLAEIDREREAFLAAQQGSLSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAER 1246 (1296)
T ss_pred ecCCCcccccccccccccCChhhhhhhhhhHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHhccCCcccCceEEEEcCC
Confidence 66311100 00 0000 01234567899999998
Q ss_pred CCCCChHHHHHHHHHccCCcEEEEEcCCCCcccc
Q 030264 113 DGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKI 146 (180)
Q Consensus 113 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 146 (180)
|..........+.+.. ...++..++ ++|..+.
T Consensus 1247 ~~~~~~~~~~~W~~~~-~~~~~~~v~-g~H~~~~ 1278 (1296)
T PRK10252 1247 TLQEGMSPEQAWSPWI-AELDVYRQD-CAHVDII 1278 (1296)
T ss_pred CCcccCCcccchhhhc-CCCEEEECC-CCHHHHC
Confidence 8765555555555554 567888886 5898664
No 145
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.50 E-value=2.8e-06 Score=58.76 Aligned_cols=116 Identities=16% Similarity=0.195 Sum_probs=79.0
Q ss_pred chHHHHHHHHHHHHHHHhhCCC-CcEEEEeeChhHHHHHHHhhcc--ccccceEEEeccCCC-----CCCc---------
Q 030264 29 KAEKLVEFHTDVVKGAVAKFPG-HPLILAGKSMGSRVSCMVACKE--DIAASAVLCLGYPLK-----GMNG--------- 91 (180)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~--~~~~~~~~~~~~~~~-----~~~~--------- 91 (180)
....+.+.+.--++.+++..+. .++.++|||.|+++.+..+... ...+..++++ +|.. ++.+
T Consensus 87 eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~L-FPTIerM~eSpnG~~~t~~l~~ 165 (301)
T KOG3975|consen 87 EIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLL-FPTIERMHESPNGIRLTKVLRY 165 (301)
T ss_pred cccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEe-cchHHHHhcCCCceEeeeeeee
Confidence 3445567788888888887764 4999999999999999999752 2334444432 1211 0000
Q ss_pred ------------------------------------cc------------------------------chhhhccCCCcE
Q 030264 92 ------------------------------------AV------------------------------RDELLLQITVPI 105 (180)
Q Consensus 92 ------------------------------------~~------------------------------~~~~~~~~~~P~ 105 (180)
.+ ..+.+.+-.+-+
T Consensus 166 ~~hv~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l 245 (301)
T KOG3975|consen 166 LPHVVSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSL 245 (301)
T ss_pred ehhhhheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEE
Confidence 00 012334445678
Q ss_pred EEEeecCCCCCChHHHHHHHHHccCC-cEEEEEcCCCCcccc
Q 030264 106 MFVQGSKDGLCPLDKLEAVRKKMKSL-SELHLIDGGDHSFKI 146 (180)
Q Consensus 106 l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~ 146 (180)
-|.+|..|..+|.+..+.+.+.++.. .++-+ ++..|.|..
T Consensus 246 ~Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~ 286 (301)
T KOG3975|consen 246 WFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVV 286 (301)
T ss_pred EEEccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceee
Confidence 99999999999999999998888753 55555 789999887
No 146
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.50 E-value=1.6e-06 Score=56.82 Aligned_cols=84 Identities=17% Similarity=0.197 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcccc----ccceEEEeccCCCCCCcccchhhhccCCCcEEEEe
Q 030264 34 VEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI----AASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQ 109 (180)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 109 (180)
...+...++.....++..+|.++|||+||.+|..++..... ....++.++.|...................+..++
T Consensus 11 ~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~~~~~~~~~~~~~~i~ 90 (153)
T cd00741 11 ANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAEDRLDPSDALFVDRIV 90 (153)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHHHhhhccCCccEEEEE
Confidence 44555555555555677899999999999999999887433 45667777765543222111122334456788899
Q ss_pred ecCCCCCC
Q 030264 110 GSKDGLCP 117 (180)
Q Consensus 110 g~~D~~~~ 117 (180)
...|.+..
T Consensus 91 ~~~D~v~~ 98 (153)
T cd00741 91 NDNDIVPR 98 (153)
T ss_pred ECCCccCC
Confidence 99996643
No 147
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.49 E-value=4e-07 Score=61.40 Aligned_cols=96 Identities=22% Similarity=0.246 Sum_probs=59.5
Q ss_pred CCcEEEEeeChhHHHHHHHhhccccccceEEEecc---CCC---------CCCc----cc----chhh---hccCCCcEE
Q 030264 50 GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY---PLK---------GMNG----AV----RDEL---LLQITVPIM 106 (180)
Q Consensus 50 ~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~---~~~---------~~~~----~~----~~~~---~~~~~~P~l 106 (180)
..++.|.||||||.=|+..+.+.+.+.+.+-.+++ |.. +.-+ .+ .... .+....-+|
T Consensus 140 ~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cpWGqKAf~gYLG~~ka~W~~yDat~lik~y~~~~~~il 219 (283)
T KOG3101|consen 140 PLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCPWGQKAFTGYLGDNKAQWEAYDATHLIKNYRGVGDDIL 219 (283)
T ss_pred chhcceeccccCCCceEEEEEcCcccccceeccccccCcccCcchHHHhhcccCCChHHHhhcchHHHHHhcCCCCccEE
Confidence 34899999999999999999988877776655441 111 0000 00 1112 233455689
Q ss_pred EEeecCCCCCC----hHHHHHHHHHcc-CCcEEEEEcCCCCccc
Q 030264 107 FVQGSKDGLCP----LDKLEAVRKKMK-SLSELHLIDGGDHSFK 145 (180)
Q Consensus 107 ~i~g~~D~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~H~~~ 145 (180)
+=.|+.|++.. |+...+..+... .++.++..+|-+|...
T Consensus 220 IdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~~gyDHSYy 263 (283)
T KOG3101|consen 220 IDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQEGYDHSYY 263 (283)
T ss_pred EecCccchhhhhhcChHHHHHHhhccccccEEEEeecCCCccee
Confidence 99999998876 233333333221 2367778888889844
No 148
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.49 E-value=5.1e-06 Score=56.74 Aligned_cols=136 Identities=21% Similarity=0.275 Sum_probs=79.8
Q ss_pred CCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc---cccccceEEEe
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK---EDIAASAVLCL 82 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~---~~~~~~~~~~~ 82 (180)
...+.|+.++.+|++.+. ......+... ......+....+..++.++|||+||.++...+.+ .+..+.+++++
T Consensus 23 ~~~~~v~~~~~~g~~~~~-~~~~~~~~~~---~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~ 98 (212)
T smart00824 23 RGRRDVSALPLPGFGPGE-PLPASADALV---EAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLL 98 (212)
T ss_pred CCCccEEEecCCCCCCCC-CCCCCHHHHH---HHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEE
Confidence 346899999999984221 1222333332 2233444444456689999999999999888876 33457778776
Q ss_pred ccCCCCCCc--------------------ccch---------------hhhccCCCcEEEEeecCCCCC-ChHHHHHHHH
Q 030264 83 GYPLKGMNG--------------------AVRD---------------ELLLQITVPIMFVQGSKDGLC-PLDKLEAVRK 126 (180)
Q Consensus 83 ~~~~~~~~~--------------------~~~~---------------~~~~~~~~P~l~i~g~~D~~~-~~~~~~~~~~ 126 (180)
......... .... -....+.+|+.++.++.|... +......+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 178 (212)
T smart00824 99 DTYPPGDPAPEGWLPELLRGVFEREDSFVPMDDARLTAMGAYLRLFGGWTPGPVAAPTLLVRASEPLAEWPDEDPDGWRA 178 (212)
T ss_pred ccCCCCCccchhhHHHHHHHHHhhhcccccccchhhhHHHHHHHHhccCCCCCCCCCEEEEeccCCCCCCCCCCcccccC
Confidence 532211000 0000 001235679999999988654 2233334444
Q ss_pred HccCCcEEEEEcCCCCcccc
Q 030264 127 KMKSLSELHLIDGGDHSFKI 146 (180)
Q Consensus 127 ~~~~~~~~~~~~~~~H~~~~ 146 (180)
......+++.++| +|....
T Consensus 179 ~~~~~~~~~~~~g-~H~~~~ 197 (212)
T smart00824 179 HWPLPHTVVDVPG-DHFTMM 197 (212)
T ss_pred CCCCCceeEEccC-chHHHH
Confidence 4444588888985 787653
No 149
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.40 E-value=4.6e-07 Score=66.13 Aligned_cols=143 Identities=20% Similarity=0.176 Sum_probs=84.0
Q ss_pred ccCCceEEEEEeccCCCCCCCC---------CCCchHHHHHHHHHHHHHHHhh---------CCCCcEEEEeeChhHHHH
Q 030264 4 KALDAVEVVTFDYPYIAGGKRK---------APPKAEKLVEFHTDVVKGAVAK---------FPGHPLILAGKSMGSRVS 65 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~---------~~~~~~~~~~~~~~~~~~~~~~---------~~~~~i~l~G~S~Gg~~a 65 (180)
.++.||.|..++.+|...|... .+........|+..+++++... .+..+|+++|||+||..+
T Consensus 94 lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~ 173 (365)
T COG4188 94 LASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTA 173 (365)
T ss_pred HhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHH
Confidence 3678999999999994312111 1112223345666666665543 334499999999999999
Q ss_pred HHHhhccccc-----cc---eEEEeccCCC--------------CC-------------------CcccchhhhccCCCc
Q 030264 66 CMVACKEDIA-----AS---AVLCLGYPLK--------------GM-------------------NGAVRDELLLQITVP 104 (180)
Q Consensus 66 ~~~a~~~~~~-----~~---~~~~~~~~~~--------------~~-------------------~~~~~~~~~~~~~~P 104 (180)
+.++.-+... .+ ..++...+.. .. .-.+....+.+++.|
T Consensus 174 m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~~~l~q~~av~~~~~~~~~rDpriravvA~~p~~~~~Fg~tgl~~v~~P 253 (365)
T COG4188 174 MELAGAELDAEALLQHCESASRICLDPPGLNGRLLNQCAAVWLPRQAYDLRDPRIRAVVAINPALGMIFGTTGLVKVTDP 253 (365)
T ss_pred HHhccccccHHHHHHHhhhhhhcccCCCCcChhhhccccccccchhhhccccccceeeeeccCCcccccccccceeeecc
Confidence 9877542110 00 0122111100 00 001223457788999
Q ss_pred EEEEeecCCCCCChH-HHHHHHHHccCC-cEEEEEcCCCCc-ccc
Q 030264 105 IMFVQGSKDGLCPLD-KLEAVRKKMKSL-SELHLIDGGDHS-FKI 146 (180)
Q Consensus 105 ~l~i~g~~D~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~H~-~~~ 146 (180)
++++.|..|...|+. ....-...+++. .-+.+.+++.|. |..
T Consensus 254 ~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~ 298 (365)
T COG4188 254 VLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLE 298 (365)
T ss_pred eeeecccccccCCcccccccccccCCcchhheeecCCCccccccc
Confidence 999999999976653 333344455543 456788999998 443
No 150
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.37 E-value=1.4e-05 Score=55.89 Aligned_cols=156 Identities=21% Similarity=0.303 Sum_probs=98.1
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHH-------HHHHhhCC------CCcEEEEeeChhHHHHHHHhhc
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVV-------KGAVAKFP------GHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~------~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
..+|...+.++-|.+ |.+.++.......+.+.+.+ ++....+. -.+..+.|-||||.+|..+.+.
T Consensus 138 ~k~~i~tmvle~pfY--gqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~ 215 (371)
T KOG1551|consen 138 NKREIATMVLEKPFY--GQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSL 215 (371)
T ss_pred hhhcchheeeecccc--cccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhccc
Confidence 346777888888888 77777766665544444332 23333332 3489999999999999999998
Q ss_pred cccccceEEEeccCCC---------CC---------------------C-ccc-----------chh-------------
Q 030264 72 EDIAASAVLCLGYPLK---------GM---------------------N-GAV-----------RDE------------- 96 (180)
Q Consensus 72 ~~~~~~~~~~~~~~~~---------~~---------------------~-~~~-----------~~~------------- 96 (180)
++..++-+-|++..-. .. + +.+ +.+
T Consensus 216 ~q~Pva~~p~l~~~~asvs~teg~l~~~~s~~~~~~~~t~~~~~~~r~p~Q~~~~~~~~~srn~~~E~~~~Mr~vmd~~T 295 (371)
T KOG1551|consen 216 HQKPVATAPCLNSSKASVSATEGLLLQDTSKMKRFNQTTNKSGYTSRNPAQSYHLLSKEQSRNSRKESLIFMRGVMDECT 295 (371)
T ss_pred CCCCccccccccccccchhhhhhhhhhhhHHHHhhccCcchhhhhhhCchhhHHHHHHHhhhcchHHHHHHHHHHHHhhc
Confidence 8777666655442100 00 0 000 000
Q ss_pred hhccCCCc-----EEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHH
Q 030264 97 LLLQITVP-----IMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAA 171 (180)
Q Consensus 97 ~~~~~~~P-----~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 171 (180)
.+....+| +.++.+++|.++|...+..+.+..+ ++++..+. +||.-... -..+.+...|.+
T Consensus 296 ~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~WP-g~eVr~~e-gGHVsayl------------~k~dlfRR~I~d 361 (371)
T KOG1551|consen 296 HVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIWP-GCEVRYLE-GGHVSAYL------------FKQDLFRRAIVD 361 (371)
T ss_pred hhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhCC-CCEEEEee-cCceeeee------------hhchHHHHHHHH
Confidence 12233344 6788999999999977777665554 69999998 58973321 224667777777
Q ss_pred HHHHh
Q 030264 172 FISKS 176 (180)
Q Consensus 172 fl~~~ 176 (180)
-|++.
T Consensus 362 ~L~R~ 366 (371)
T KOG1551|consen 362 GLDRL 366 (371)
T ss_pred HHHhh
Confidence 77654
No 151
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.31 E-value=1.7e-05 Score=55.96 Aligned_cols=150 Identities=11% Similarity=0.081 Sum_probs=95.2
Q ss_pred CceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCC--CcEEEEeeChhHHHHHHHhhc---------cc-c
Q 030264 7 DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPG--HPLILAGKSMGSRVSCMVACK---------ED-I 74 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~---------~~-~ 74 (180)
.|+.++.+-.+... .-.+. ..+...+..+++.+.+.... .++.+-.+|.||...+..... .. +
T Consensus 26 ~g~~il~~~~~~~~--~~~~~---~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~ 100 (240)
T PF05705_consen 26 PGFDILLVTSPPAD--FFWPS---KRLAPAADKLLELLSDSQSASPPPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLP 100 (240)
T ss_pred cCCeEEEEeCCHHH--Heeec---cchHHHHHHHHHHhhhhccCCCCCEEEEEEECchHHHHHHHHHHHHhccccccccc
Confidence 68888887766531 00011 22333344444444443222 289999999988887766552 11 2
Q ss_pred ccceEEEeccCCCCC------------Ccc-----c-c--------------------------------hhhhccCCCc
Q 030264 75 AASAVLCLGYPLKGM------------NGA-----V-R--------------------------------DELLLQITVP 104 (180)
Q Consensus 75 ~~~~~~~~~~~~~~~------------~~~-----~-~--------------------------------~~~~~~~~~P 104 (180)
+++++|+.++|.... +.. . . ........+|
T Consensus 101 ~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 180 (240)
T PF05705_consen 101 RIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLLRLSIISYFIFGYPDVQEYYRRALNDFANSPSRCP 180 (240)
T ss_pred ccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhhhhcCCCCCC
Confidence 388999888774311 111 0 0 0012234689
Q ss_pred EEEEeecCCCCCChHHHHHHHHHccC---CcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHH
Q 030264 105 IMFVQGSKDGLCPLDKLEAVRKKMKS---LSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFI 173 (180)
Q Consensus 105 ~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl 173 (180)
-|+++++.|.+++.+.++++.+.... .++...++++.|.-+.. ..+++.++.+.+|+
T Consensus 181 ~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r------------~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 181 RLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLR------------KHPDRYWRAVDEFW 240 (240)
T ss_pred eEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcc------------cCHHHHHHHHHhhC
Confidence 99999999999999999888766543 27778899999997763 44688888887763
No 152
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.24 E-value=7.1e-05 Score=54.73 Aligned_cols=125 Identities=11% Similarity=0.121 Sum_probs=79.2
Q ss_pred HHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccc-cccceEEEeccCCCCCCc-ccchhhhccCCCcEEEEeecCC
Q 030264 36 FHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED-IAASAVLCLGYPLKGMNG-AVRDELLLQITVPIMFVQGSKD 113 (180)
Q Consensus 36 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~g~~D 113 (180)
.+...+..... .+..+++++||+.|+..++.+....+ ..++++|+++........ ....+.+.+++.|+|=|++.+.
T Consensus 179 ri~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~~n~~l~~~la~l~iPvLDi~~~~~ 257 (310)
T PF12048_consen 179 RIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQPDRNPALAEQLAQLKIPVLDIYSADN 257 (310)
T ss_pred HHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcchhhhhHHHHhhccCCCEEEEecCCC
Confidence 34444444443 45657999999999999999999865 458999999965543332 3345668889999999998883
Q ss_pred CCCChHHHHH---HHHHcc-CCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHh
Q 030264 114 GLCPLDKLEA---VRKKMK-SLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKS 176 (180)
Q Consensus 114 ~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 176 (180)
+ ........ ..+... ...+-+.+++..|... ...+.+.+.|..||+++
T Consensus 258 ~-~~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~--------------~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 258 P-ASQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPS--------------GWQEQLLRRIRGWLKRH 309 (310)
T ss_pred h-HHHHHHHHHHHHHHhccCCCceeEecCCCCCChh--------------hHHHHHHHHHHHHHHhh
Confidence 3 22222211 111111 1244445555555443 22344999999999875
No 153
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.22 E-value=1.1e-05 Score=56.62 Aligned_cols=106 Identities=13% Similarity=0.029 Sum_probs=68.7
Q ss_pred EEEEEeccCCCCCCCCC----CCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc----cc-----ccc
Q 030264 10 EVVTFDYPYIAGGKRKA----PPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK----ED-----IAA 76 (180)
Q Consensus 10 ~v~~~d~~g~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~----~~-----~~~ 76 (180)
.++.|.||..+ .... ..........+.+.+..+....+..+|.+++||||+.+.+.+... .. ..+
T Consensus 50 ~~i~FsWPS~g--~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~ 127 (233)
T PF05990_consen 50 VVILFSWPSDG--SLLGYFYDRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARF 127 (233)
T ss_pred eEEEEEcCCCC--ChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhh
Confidence 79999999863 2111 112223345666667777666577799999999999999988765 11 256
Q ss_pred ceEEEeccCCCCCCcccc--hhhhccCCCcEEEEeecCCCCCChH
Q 030264 77 SAVLCLGYPLKGMNGAVR--DELLLQITVPIMFVQGSKDGLCPLD 119 (180)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~l~i~g~~D~~~~~~ 119 (180)
..+++.++-... +.+. ...+.+...++.+.+..+|......
T Consensus 128 ~~viL~ApDid~--d~f~~~~~~~~~~~~~itvy~s~~D~AL~~S 170 (233)
T PF05990_consen 128 DNVILAAPDIDN--DVFRSQLPDLGSSARRITVYYSRNDRALKAS 170 (233)
T ss_pred heEEEECCCCCH--HHHHHHHHHHhhcCCCEEEEEcCCchHHHHH
Confidence 778887633321 1111 1234555689999999999776543
No 154
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.14 E-value=6.5e-05 Score=53.65 Aligned_cols=105 Identities=17% Similarity=0.146 Sum_probs=61.4
Q ss_pred HHHHHhhCCC----CcEEEEeeChhHHHHHHHhhccccccceEEEeccCCCCC-Ccccc-------hhhhccC---CCcE
Q 030264 41 VKGAVAKFPG----HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGM-NGAVR-------DELLLQI---TVPI 105 (180)
Q Consensus 41 ~~~~~~~~~~----~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~---~~P~ 105 (180)
+-++.+.++. ..-+++|.|+||.+++.++.++|+.+..++..++.+... .+... ......+ ..-+
T Consensus 163 lP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~ 242 (299)
T COG2382 163 LPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPLDTQPQGEVAESLKILHAIGTDERIV 242 (299)
T ss_pred hhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCccccccccchhhhhhhhhccCccceEE
Confidence 3344444442 256899999999999999999999999998877544322 11111 1111112 1223
Q ss_pred EEEeecCCCCCChHH-HHHHHHHccCCcEEEEEcCCCCcccc
Q 030264 106 MFVQGSKDGLCPLDK-LEAVRKKMKSLSELHLIDGGDHSFKI 146 (180)
Q Consensus 106 l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~H~~~~ 146 (180)
+...++.+.+.++.. ..+..+.-.....+..|+| ||.+..
T Consensus 243 l~~g~~~~~~~~pNr~L~~~L~~~g~~~~yre~~G-gHdw~~ 283 (299)
T COG2382 243 LTTGGEEGDFLRPNRALAAQLEKKGIPYYYREYPG-GHDWAW 283 (299)
T ss_pred eecCCccccccchhHHHHHHHHhcCCcceeeecCC-CCchhH
Confidence 333444445554432 2233333233378889998 999875
No 155
>COG3150 Predicted esterase [General function prediction only]
Probab=98.13 E-value=4.5e-05 Score=49.76 Aligned_cols=103 Identities=17% Similarity=0.204 Sum_probs=61.8
Q ss_pred HHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEeccCCC---------CCCc------cc--------
Q 030264 37 HTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK---------GMNG------AV-------- 93 (180)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~---------~~~~------~~-------- 93 (180)
+.+.++.+........+.++|.|+||+.|.+++.+. -++++++ ++.+. +.++ .+
T Consensus 45 a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~--Girav~~-NPav~P~e~l~gylg~~en~ytg~~y~le~~hI~ 121 (191)
T COG3150 45 ALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLC--GIRAVVF-NPAVRPYELLTGYLGRPENPYTGQEYVLESRHIA 121 (191)
T ss_pred HHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHh--CChhhhc-CCCcCchhhhhhhcCCCCCCCCcceEEeehhhHH
Confidence 333444444445555689999999999999999985 3455554 22111 0111 11
Q ss_pred --chhhhccCCCc-EEEEeec-CCCCCChHHHHHHHHHccCCcEEEEEcCCCCcccc
Q 030264 94 --RDELLLQITVP-IMFVQGS-KDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKI 146 (180)
Q Consensus 94 --~~~~~~~~~~P-~l~i~g~-~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 146 (180)
....+..++.| .+.+... .|.+.+...+.+.+.. +...+.+|+.|.|..
T Consensus 122 ~l~~~~~~~l~~p~~~~lL~qtgDEvLDyr~a~a~y~~----~~~~V~dgg~H~F~~ 174 (191)
T COG3150 122 TLCVLQFRELNRPRCLVLLSQTGDEVLDYRQAVAYYHP----CYEIVWDGGDHKFKG 174 (191)
T ss_pred HHHHhhccccCCCcEEEeecccccHHHHHHHHHHHhhh----hhheeecCCCccccc
Confidence 01134445555 4445454 4999887776665532 556677888999876
No 156
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.12 E-value=2.4e-05 Score=57.87 Aligned_cols=142 Identities=17% Similarity=0.187 Sum_probs=87.8
Q ss_pred cCCceEEEEEe-ccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccc----cccceE
Q 030264 5 ALDAVEVVTFD-YPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED----IAASAV 79 (180)
Q Consensus 5 a~~g~~v~~~d-~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~----~~~~~~ 79 (180)
+++|+.|+-+| +|++ .+ ..+.+....|+..++++...++...++.++|+|+|+-+-...-.+-+ ..++.+
T Consensus 284 ~~~gvpVvGvdsLRYf--W~---~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~~~~r~~v~~~ 358 (456)
T COG3946 284 QKQGVPVVGVDSLRYF--WS---ERTPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLPPATRQRVRMV 358 (456)
T ss_pred HHCCCceeeeehhhhh--hc---cCCHHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCCHHHHHHHHHH
Confidence 46799999999 6776 33 33456677899999999999889899999999999987655444422 223333
Q ss_pred EEecc------------CCC-CCCc-ccchhhhccC-CCcEEEEeecCCCC--CChHHHHHHHHHccCCcEEEEEcCCCC
Q 030264 80 LCLGY------------PLK-GMNG-AVRDELLLQI-TVPIMFVQGSKDGL--CPLDKLEAVRKKMKSLSELHLIDGGDH 142 (180)
Q Consensus 80 ~~~~~------------~~~-~~~~-~~~~~~~~~~-~~P~l~i~g~~D~~--~~~~~~~~~~~~~~~~~~~~~~~~~~H 142 (180)
.+++- ++. ...+ ......+.++ ...+.+|+|.+|.- +|. +. .+..+++.+|| ||
T Consensus 359 ~ll~l~~~~~fe~~v~gWlg~~~~g~~~~~~~~~~l~~~~v~CiYG~~e~d~~Cp~-----l~---~~~~~~v~lpG-gH 429 (456)
T COG3946 359 SLLGLGRTADFEISVEGWLGMAGEGAGDVVPDIAKLPLARVQCIYGQEEKDTACPS-----LK---AKGVDTVKLPG-GH 429 (456)
T ss_pred HHHhccccceEEEEEeeeeccCCcCCCCcchhhhhCCcceeEEEecCccccccCCc-----ch---hhcceeEecCC-Cc
Confidence 22221 111 1111 1122334444 34688999987643 331 11 12378888897 67
Q ss_pred ccccccccccccccchhHHHHHHHHHHHHHHH
Q 030264 143 SFKIGKKHLQTMGTTQDEMEGLAVQAIAAFIS 174 (180)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 174 (180)
.|..+ .+...+.|++=++
T Consensus 430 HFd~d--------------y~~la~~il~~~~ 447 (456)
T COG3946 430 HFDGD--------------YEKLAKAILQGMR 447 (456)
T ss_pred ccCcc--------------HHHHHHHHHHHHH
Confidence 77743 4667777776654
No 157
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.09 E-value=8.9e-05 Score=57.88 Aligned_cols=142 Identities=11% Similarity=0.009 Sum_probs=92.3
Q ss_pred ccCCceEEEEEeccCCCC-CCC----CCCCchHHHHHHHHHHHHHHHhh-C-CCCcEEEEeeChhHHHHHHHhhcccccc
Q 030264 4 KALDAVEVVTFDYPYIAG-GKR----KAPPKAEKLVEFHTDVVKGAVAK-F-PGHPLILAGKSMGSRVSCMVACKEDIAA 76 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~-g~~----~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~i~l~G~S~Gg~~a~~~a~~~~~~~ 76 (180)
...+|+.....|.||-|. |.. ..-..-.+..+|+...++.+.+. + ...+..+.|.|.||.++..+.-++|+.+
T Consensus 495 lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF 574 (712)
T KOG2237|consen 495 LLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLF 574 (712)
T ss_pred EEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHh
Confidence 345788888889998531 111 11233345578999999998885 2 2348999999999999999888899998
Q ss_pred ceEEEeccCCCCC---------------------Ccc-------cchhhhccCC-----CcEEEEeecCCCCCChHHHHH
Q 030264 77 SAVLCLGYPLKGM---------------------NGA-------VRDELLLQIT-----VPIMFVQGSKDGLCPLDKLEA 123 (180)
Q Consensus 77 ~~~~~~~~~~~~~---------------------~~~-------~~~~~~~~~~-----~P~l~i~g~~D~~~~~~~~~~ 123 (180)
.++++-. |+..+ ++. .+.....++. .-+|+..+.+|..+.+-...+
T Consensus 575 ~avia~V-pfmDvL~t~~~tilplt~sd~ee~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K 653 (712)
T KOG2237|consen 575 GAVIAKV-PFMDVLNTHKDTILPLTTSDYEEWGNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLK 653 (712)
T ss_pred hhhhhcC-cceehhhhhccCccccchhhhcccCChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHH
Confidence 8888733 22110 000 0001112221 247889999998888877777
Q ss_pred HHHHccC----------CcEEEEEcCCCCcccc
Q 030264 124 VRKKMKS----------LSELHLIDGGDHSFKI 146 (180)
Q Consensus 124 ~~~~~~~----------~~~~~~~~~~~H~~~~ 146 (180)
+.+++.. ++-+.+..++||+...
T Consensus 654 ~vAklre~~~~~~~q~~pvll~i~~~agH~~~~ 686 (712)
T KOG2237|consen 654 WVAKLREATCDSLKQTNPVLLRIETKAGHGAEK 686 (712)
T ss_pred HHHHHHHHhhcchhcCCCEEEEEecCCccccCC
Confidence 6655431 2446677899999765
No 158
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.09 E-value=3.2e-05 Score=59.83 Aligned_cols=158 Identities=14% Similarity=0.127 Sum_probs=103.0
Q ss_pred cCCceEEEEEeccCCCCCCCCCC--------CchHHHHHHHHHHHHHHHhhC--CCCcEEEEeeChhHHHHHHHhhcccc
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAP--------PKAEKLVEFHTDVVKGAVAKF--PGHPLILAGKSMGSRVSCMVACKEDI 74 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~ 74 (180)
.++|...+.-+.|| |....+ .+-....+|+..+...+..+- ..+++++.|-|=||.++-.+..++|+
T Consensus 447 LerGg~~v~ANIRG---GGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPe 523 (648)
T COG1505 447 LERGGVFVLANIRG---GGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPE 523 (648)
T ss_pred HhcCCeEEEEeccc---CCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChh
Confidence 46788888999999 433332 122234688888888887752 23489999999999998888888999
Q ss_pred ccceEEEeccCCCCC------------------Cccc-------chhhhccCC-----CcEEEEeecCCCCCChHHHHHH
Q 030264 75 AASAVLCLGYPLKGM------------------NGAV-------RDELLLQIT-----VPIMFVQGSKDGLCPLDKLEAV 124 (180)
Q Consensus 75 ~~~~~~~~~~~~~~~------------------~~~~-------~~~~~~~~~-----~P~l~i~g~~D~~~~~~~~~~~ 124 (180)
.+.+++|-. |+..| ++.. ......+++ .|+||-.+..|..|.|.++.++
T Consensus 524 lfgA~v~ev-PllDMlRYh~l~aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKf 602 (648)
T COG1505 524 LFGAAVCEV-PLLDMLRYHLLTAGSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKF 602 (648)
T ss_pred hhCceeecc-chhhhhhhcccccchhhHhhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHH
Confidence 888888732 32211 1100 001122222 4899999999999999999998
Q ss_pred HHHccCC-cEEEEE--cCCCCccccccccccccccchhHHHHHHHHHHHHHHHHhh
Q 030264 125 RKKMKSL-SELHLI--DGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSL 177 (180)
Q Consensus 125 ~~~~~~~-~~~~~~--~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 177 (180)
+..+... ..+.++ -++||.-..+. .....-...+..||.+.|
T Consensus 603 aa~L~e~~~pv~~~e~t~gGH~g~~~~-----------~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 603 AAKLQEVGAPVLLREETKGGHGGAAPT-----------AEIARELADLLAFLLRTL 647 (648)
T ss_pred HHHHHhcCCceEEEeecCCcccCCCCh-----------HHHHHHHHHHHHHHHHhh
Confidence 8877533 333333 35789855422 222334555677777765
No 159
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.08 E-value=1.8e-05 Score=48.24 Aligned_cols=60 Identities=22% Similarity=0.408 Sum_probs=49.3
Q ss_pred CCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHH
Q 030264 101 ITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFIS 174 (180)
Q Consensus 101 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 174 (180)
-..|+|++.++.|+..|.+.+.++.+.++. .+++.+++.||...... ..-+.+.+.+||.
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~-s~lvt~~g~gHg~~~~~-------------s~C~~~~v~~yl~ 92 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPG-SRLVTVDGAGHGVYAGG-------------SPCVDKAVDDYLL 92 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCC-ceEEEEeccCcceecCC-------------ChHHHHHHHHHHH
Confidence 358999999999999999999999999985 89999999999965311 2456666777775
No 160
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.08 E-value=0.00017 Score=50.83 Aligned_cols=38 Identities=11% Similarity=-0.012 Sum_probs=33.6
Q ss_pred CCcEEEEeeChhHHHHHHHhhccccccceEEEeccCCC
Q 030264 50 GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 87 (180)
Q Consensus 50 ~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~ 87 (180)
.++-+++|||+||.+++.+...+|..+....+.++.+.
T Consensus 136 ~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 136 SERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred cccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 44799999999999999999999999999999886654
No 161
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.07 E-value=2e-05 Score=56.03 Aligned_cols=171 Identities=22% Similarity=0.212 Sum_probs=95.7
Q ss_pred cCCceEEEEEe-ccCCC--C--CCCCCCC---chHHHHHHHHHHHHHHHhhCCCC--cEEEEeeChhHHHHHHHhhcccc
Q 030264 5 ALDAVEVVTFD-YPYIA--G--GKRKAPP---KAEKLVEFHTDVVKGAVAKFPGH--PLILAGKSMGSRVSCMVACKEDI 74 (180)
Q Consensus 5 a~~g~~v~~~d-~~g~~--~--g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~ 74 (180)
.+.||.|+.+| +++.- . +....+. .-.+-...+.+++..+..++..+ +|++.|.|-||.|+..++..+|.
T Consensus 88 d~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~ 167 (312)
T COG3509 88 DREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPD 167 (312)
T ss_pred cccCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcc
Confidence 45799999995 33321 0 1111111 11223567778888888887655 99999999999999999999999
Q ss_pred ccceEEEeccCCC-C----CCccc---c-----hhhhccCCCcEEEEeecCCCCCChHHHHHHHHHcc------------
Q 030264 75 AASAVLCLGYPLK-G----MNGAV---R-----DELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMK------------ 129 (180)
Q Consensus 75 ~~~~~~~~~~~~~-~----~~~~~---~-----~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------ 129 (180)
.+.++..++.... . .+..+ + +....--.-+.-|-+|..|..++.....+....++
T Consensus 168 ~faa~A~VAg~~~~~~a~~~~rp~~~m~~~G~~Dp~~p~~gG~~~~g~g~~~~~v~~~~~~~~Waa~ng~~~~p~~~~~~ 247 (312)
T COG3509 168 IFAAIAPVAGLLALGVACTPPRPVSVMAFHGTADPLNPYHGGGVPIGRGQRDGVVSAADLAARWAAVNGCQAGPDTAELP 247 (312)
T ss_pred cccceeeeecccCCCcccCCCCchhHHHhcCCCCCCCCCCCCCcccccccccccccHHHHHHHHHHhcCCCCCCcccccC
Confidence 8888877664431 0 00000 0 00000011111267777777765554444433321
Q ss_pred --------------CCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHh
Q 030264 130 --------------SLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKS 176 (180)
Q Consensus 130 --------------~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 176 (180)
..+++..+.|.||.+.....+ .+........--.....|.+|+..+
T Consensus 248 ~~~~~~~~~~~~~~~~V~~y~i~g~GH~wp~~~~~-~~~~~g~~t~~~dat~~iw~Ff~~~ 307 (312)
T COG3509 248 DVGDGTDYDTCDGNARVELYTIDGGGHTWPGGTQY-GPAALGMSTRGFDATERIWRFFRQH 307 (312)
T ss_pred CCcccceeeccCCCcceEEEEEeCCcccCcCCCCC-CcccccccccCcchHHHHHHHHHhc
Confidence 015677889999998853321 0111111111123455677777665
No 162
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.07 E-value=0.00018 Score=56.53 Aligned_cols=140 Identities=11% Similarity=-0.007 Sum_probs=90.7
Q ss_pred ccccCCceEEEEEeccCCCCCCCCCC--------CchHHHHHHHHHHHHHHHhh-CC-CCcEEEEeeChhHHHHHHHhhc
Q 030264 2 LGKALDAVEVVTFDYPYIAGGKRKAP--------PKAEKLVEFHTDVVKGAVAK-FP-GHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 2 ~~~a~~g~~v~~~d~~g~~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~-~~-~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
|.+..+||....---||- ...+. ..-.....|+.++.+.+... +. .++|+++|-|.||++.-..+-+
T Consensus 471 lSLlDRGfiyAIAHVRGG---gelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~ 547 (682)
T COG1770 471 LSLLDRGFVYAIAHVRGG---GELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANM 547 (682)
T ss_pred eeeecCceEEEEEEeecc---cccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhh
Confidence 566788988777778883 22111 11222357777777777764 22 3489999999999998888888
Q ss_pred cccccceEEEeccCCCCCCcc-------------------------------cchhhhc-cCCCcEEEEeecCCCCCChH
Q 030264 72 EDIAASAVLCLGYPLKGMNGA-------------------------------VRDELLL-QITVPIMFVQGSKDGLCPLD 119 (180)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~-~~~~P~l~i~g~~D~~~~~~ 119 (180)
.|+.++++|+-. |+...-.. .+.+.+. +--.|+|++.|-.|+.+.+-
T Consensus 548 ~P~lf~~iiA~V-PFVDvltTMlD~slPLT~~E~~EWGNP~d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~Yw 626 (682)
T COG1770 548 APDLFAGIIAQV-PFVDVLTTMLDPSLPLTVTEWDEWGNPLDPEYYDYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQYW 626 (682)
T ss_pred ChhhhhheeecC-CccchhhhhcCCCCCCCccchhhhCCcCCHHHHHHHhhcCchhccccCCCCceEEEccccCCccccc
Confidence 899999998744 33211000 0111122 22257999999999999998
Q ss_pred HHHHHHHHccCC------cEEEEEcCCCCccc
Q 030264 120 KLEAVRKKMKSL------SELHLIDGGDHSFK 145 (180)
Q Consensus 120 ~~~~~~~~~~~~------~~~~~~~~~~H~~~ 145 (180)
+-.++.+++... .=+.+=-.+||+=.
T Consensus 627 EpAKWvAkLR~~~td~~plLlkt~M~aGHgG~ 658 (682)
T COG1770 627 EPAKWVAKLRELKTDGNPLLLKTNMDAGHGGA 658 (682)
T ss_pred hHHHHHHHHhhcccCCCcEEEEecccccCCCC
Confidence 888888887532 12223235899743
No 163
>COG0627 Predicted esterase [General function prediction only]
Probab=98.06 E-value=5.7e-05 Score=55.14 Aligned_cols=113 Identities=18% Similarity=0.151 Sum_probs=73.6
Q ss_pred cEEEEeeChhHHHHHHHhhccccccceEEEeccCCCCC---------Cc-----------------ccch----hhhc--
Q 030264 52 PLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGM---------NG-----------------AVRD----ELLL-- 99 (180)
Q Consensus 52 ~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~---------~~-----------------~~~~----~~~~-- 99 (180)
+..++||||||.=|+.+|.++|+++..+..++..+... .. .+.. ..+.
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~~~~~G~~~~~~w~~~D~~~~~~~l 232 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKAFNAMLGPDSDPAWQENDPLSLIEKL 232 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccCccHHHhcCCCccccccccCchhHHHHh
Confidence 68999999999999999999988888776655322211 00 0000 0111
Q ss_pred --c----------CCCcEEEEeecCCCCCC--hHHHHHHHHHc---cCCcEEEEEcCCCCccccccccccccccchhHHH
Q 030264 100 --Q----------ITVPIMFVQGSKDGLCP--LDKLEAVRKKM---KSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEME 162 (180)
Q Consensus 100 --~----------~~~P~l~i~g~~D~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~ 162 (180)
+ ...++++-+|..|.+.. ......+.+++ ..+.++...+++.|.+.. +
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~G~Hsw~~---------------w 297 (316)
T COG0627 233 VANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVRDQPGGDHSWYF---------------W 297 (316)
T ss_pred hhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceeeeCCCCCcCHHH---------------H
Confidence 1 33567777888887764 12233444443 345777777888999865 5
Q ss_pred HHHHHHHHHHHHHhhcC
Q 030264 163 GLAVQAIAAFISKSLGE 179 (180)
Q Consensus 163 ~~~~~~i~~fl~~~~~~ 179 (180)
...+...+.|+...+..
T Consensus 298 ~~~l~~~~~~~a~~l~~ 314 (316)
T COG0627 298 ASQLADHLPWLAGALGL 314 (316)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 67888888888877653
No 164
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=98.03 E-value=5.1e-05 Score=51.04 Aligned_cols=106 Identities=20% Similarity=0.222 Sum_probs=63.5
Q ss_pred ceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc------cccccceEEE
Q 030264 8 AVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK------EDIAASAVLC 81 (180)
Q Consensus 8 g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~------~~~~~~~~~~ 81 (180)
...+..++||-...+. ........-..++.+.+.......+..+|+++|+|.|+.++..++.. ...+|.++++
T Consensus 39 ~~~~~~V~YpA~~~~~-~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvl 117 (179)
T PF01083_consen 39 SVAVQGVEYPASLGPN-SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVL 117 (179)
T ss_dssp EEEEEE--S---SCGG-SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEE
T ss_pred eeEEEecCCCCCCCcc-cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEE
Confidence 3556666777532111 01122233356666777777777888899999999999999999866 3457889999
Q ss_pred eccCCCCCCcccchhhhccCCCcEEEEeecCCCCCC
Q 030264 82 LGYPLKGMNGAVRDELLLQITVPIMFVQGSKDGLCP 117 (180)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 117 (180)
++-|....... .......-.++-++-..|++++
T Consensus 118 fGdP~~~~~~~---~~~~~~~~~~~~~C~~gD~vC~ 150 (179)
T PF01083_consen 118 FGDPRRGAGQP---GIPGDYSDRVRSYCNPGDPVCD 150 (179)
T ss_dssp ES-TTTBTTTT---TBTCSCGGGEEEE-BTT-GGGG
T ss_pred ecCCcccCCcc---ccCcccccceeEEcCCCCcccC
Confidence 99776532221 1112233468889999999884
No 165
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.01 E-value=2.8e-05 Score=58.64 Aligned_cols=70 Identities=19% Similarity=0.296 Sum_probs=50.6
Q ss_pred EeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccc------cccceEEEeccCCC
Q 030264 14 FDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED------IAASAVLCLGYPLK 87 (180)
Q Consensus 14 ~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~------~~~~~~~~~~~~~~ 87 (180)
+|||-. +.........+...++.+.... .++++|+||||||.++..++...+ ..|+++|.++.|+.
T Consensus 90 YDWR~~-------~~~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 90 YDWRLS-------PAERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred echhhc-------hhhHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 577762 1133344566677777766654 779999999999999999887753 35999999998876
Q ss_pred CCCc
Q 030264 88 GMNG 91 (180)
Q Consensus 88 ~~~~ 91 (180)
+...
T Consensus 162 Gs~~ 165 (389)
T PF02450_consen 162 GSPK 165 (389)
T ss_pred CChH
Confidence 5443
No 166
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.97 E-value=0.00049 Score=51.20 Aligned_cols=135 Identities=16% Similarity=0.162 Sum_probs=82.2
Q ss_pred ceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc-----cccccceEEEe
Q 030264 8 AVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK-----EDIAASAVLCL 82 (180)
Q Consensus 8 g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-----~~~~~~~~~~~ 82 (180)
...++++||.-.+ +......+.....+....++.+.+..+.++|.+||-|.||.+++.++.. .....+.++++
T Consensus 154 ~~SILvLDYsLt~--~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLI 231 (374)
T PF10340_consen 154 EVSILVLDYSLTS--SDEHGHKYPTQLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILI 231 (374)
T ss_pred CCeEEEEeccccc--cccCCCcCchHHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEE
Confidence 3478899998753 0111222233345555666777644466799999999999999988865 11335688888
Q ss_pred ccCCCCCC-----cc-c-------------------------------------------chhhhccC--CCcEEEEeec
Q 030264 83 GYPLKGMN-----GA-V-------------------------------------------RDELLLQI--TVPIMFVQGS 111 (180)
Q Consensus 83 ~~~~~~~~-----~~-~-------------------------------------------~~~~~~~~--~~P~l~i~g~ 111 (180)
++++.... .. . ..+....+ ..-+++++|+
T Consensus 232 SPWv~l~~~~~~~~~~~~~n~~~D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~~vfVi~Ge 311 (374)
T PF10340_consen 232 SPWVNLVPQDSQEGSSYHDNEKRDMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDILKKYSVFVIYGE 311 (374)
T ss_pred CCCcCCcCCCCCCCccccccccccccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHhccCCcEEEEECC
Confidence 85433110 00 0 00011111 2468999999
Q ss_pred CCCCCChHHHHHHHHHccC--------CcEEEEEcCCCCcccc
Q 030264 112 KDGLCPLDKLEAVRKKMKS--------LSELHLIDGGDHSFKI 146 (180)
Q Consensus 112 ~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~H~~~~ 146 (180)
++-+- ++..++.+.+.. ..++.+-+++.|.-+.
T Consensus 312 ~Evfr--ddI~~~~~~~~~~~~~~~~~~~nv~~~~~G~Hi~P~ 352 (374)
T PF10340_consen 312 DEVFR--DDILEWAKKLNDVKPNKFSNSNNVYIDEGGIHIGPI 352 (374)
T ss_pred ccccH--HHHHHHHHHHhhcCccccCCcceEEEecCCccccch
Confidence 98664 577777777541 1567777888888543
No 167
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.96 E-value=4.5e-05 Score=49.04 Aligned_cols=38 Identities=24% Similarity=0.510 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc
Q 030264 34 VEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
.+.+.+.++.+.+.++..+|.+.|||+||.+|..++..
T Consensus 47 ~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 47 YDQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 34555666666667777799999999999999999977
No 168
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.94 E-value=8.7e-05 Score=50.78 Aligned_cols=76 Identities=12% Similarity=-0.029 Sum_probs=49.1
Q ss_pred CCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc--cccccceEEEec
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK--EDIAASAVLCLG 83 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~~~~~~~~~~~ 83 (180)
+.+|..+.+.++..- .........+..+++..+++.+...-....|+++|||.|+.-.+.+..+ .+..+.+.|+.+
T Consensus 64 e~~wslVq~q~~Ssy--~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqA 141 (299)
T KOG4840|consen 64 ENSWSLVQPQLRSSY--NGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQA 141 (299)
T ss_pred hccceeeeeeccccc--cccccccccccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhC
Confidence 456777777766531 1113333445567788888876654334489999999999999888855 344555555544
No 169
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.89 E-value=6.4e-05 Score=53.22 Aligned_cols=75 Identities=17% Similarity=0.172 Sum_probs=51.8
Q ss_pred ceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc---cccccceEEEecc
Q 030264 8 AVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK---EDIAASAVLCLGY 84 (180)
Q Consensus 8 g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~---~~~~~~~~~~~~~ 84 (180)
-..|+.++.||+. +........+ +.+...++.++...+..++.++|||+||.+|...|.+ ....+..++++..
T Consensus 26 ~~~v~~l~a~g~~-~~~~~~~~l~---~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~ 101 (257)
T COG3319 26 LLPVYGLQAPGYG-AGEQPFASLD---DMAAAYVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDA 101 (257)
T ss_pred CceeeccccCccc-ccccccCCHH---HHHHHHHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEecc
Confidence 3668888888874 2222334444 4444555566665676799999999999999999987 3456778888774
Q ss_pred CC
Q 030264 85 PL 86 (180)
Q Consensus 85 ~~ 86 (180)
+.
T Consensus 102 ~~ 103 (257)
T COG3319 102 VP 103 (257)
T ss_pred CC
Confidence 43
No 170
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.79 E-value=0.00024 Score=49.72 Aligned_cols=78 Identities=21% Similarity=0.292 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccc-----cccceEEEeccCCCCCCcccchhhhccCCCcEEEEe
Q 030264 35 EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED-----IAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQ 109 (180)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 109 (180)
.++...+..++..++..++.+.|||+||.+|..++.... ..+. ++.++.|-.+... + .........-+.-+.
T Consensus 112 ~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~-~~tFg~P~vg~~~-~-a~~~~~~~~~~~rvv 188 (229)
T cd00519 112 NQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVT-VYTFGQPRVGNAA-F-AEYLESTKGRVYRVV 188 (229)
T ss_pred HHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceE-EEEeCCCCCCCHH-H-HHHhhccCCCEEEEE
Confidence 334444555555667779999999999999999887632 2233 4444444332211 1 111223344466667
Q ss_pred ecCCCC
Q 030264 110 GSKDGL 115 (180)
Q Consensus 110 g~~D~~ 115 (180)
-..|.+
T Consensus 189 ~~~D~V 194 (229)
T cd00519 189 HGNDIV 194 (229)
T ss_pred ECCCcc
Confidence 777754
No 171
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.74 E-value=0.0012 Score=46.26 Aligned_cols=135 Identities=13% Similarity=0.200 Sum_probs=75.7
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhC--C--CCcEEEEeeChhHHHHHHHhhccccccceEE
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF--P--GHPLILAGKSMGSRVSCMVACKEDIAASAVL 80 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~ 80 (180)
+.+||.|++.-|.- +.. ...........+..+++.+.... . ..+++-+|||+|+-+-+.+.+..+..-++.+
T Consensus 44 a~~Gy~ViAtPy~~---tfD-H~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gni 119 (250)
T PF07082_consen 44 ADRGYAVIATPYVV---TFD-HQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNI 119 (250)
T ss_pred HhCCcEEEEEecCC---CCc-HHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceE
Confidence 57899999987754 111 11223334455666666665532 1 1378899999999999888877654456667
Q ss_pred EeccCCCCCCc----------ccc-------hhh---hc--cCCCcEEEEeecCCCCCChHHHHHHHHHcc----CCcEE
Q 030264 81 CLGYPLKGMNG----------AVR-------DEL---LL--QITVPIMFVQGSKDGLCPLDKLEAVRKKMK----SLSEL 134 (180)
Q Consensus 81 ~~~~~~~~~~~----------~~~-------~~~---~~--~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~ 134 (180)
+++|--....+ ... .+. ++ -....+++|.=++|.+- ++..+.+.+. ...+.
T Consensus 120 liSFNN~~a~~aIP~~~~l~~~l~~EF~PsP~ET~~li~~~Y~~~rnLLIkF~~D~iD---qt~~L~~~L~~r~~~~~~~ 196 (250)
T PF07082_consen 120 LISFNNFPADEAIPLLEQLAPALRLEFTPSPEETRRLIRESYQVRRNLLIKFNDDDID---QTDELEQILQQRFPDMVSI 196 (250)
T ss_pred EEecCChHHHhhCchHhhhccccccCccCCHHHHHHHHHHhcCCccceEEEecCCCcc---chHHHHHHHhhhccccceE
Confidence 76642110000 000 010 00 11235788888888763 3333333333 22677
Q ss_pred EEEcCCCCccccc
Q 030264 135 HLIDGGDHSFKIG 147 (180)
Q Consensus 135 ~~~~~~~H~~~~~ 147 (180)
..++| .|-....
T Consensus 197 ~~L~G-~HLTPl~ 208 (250)
T PF07082_consen 197 QTLPG-NHLTPLG 208 (250)
T ss_pred EeCCC-CCCCcCc
Confidence 78875 7876553
No 172
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.73 E-value=0.0016 Score=43.58 Aligned_cols=81 Identities=20% Similarity=0.217 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHhhC-CCCcEEEEeeChhHHHHHHHhhccccccceEEEeccCCCCCCcccchhhhccCCCcEEEEeec
Q 030264 33 LVEFHTDVVKGAVAKF-PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQGS 111 (180)
Q Consensus 33 ~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 111 (180)
...++...++.+.... +..++.++|||+|+.++-.++...+..+..++++++|..+... ...+..-...+....+.
T Consensus 90 ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g~~~---a~~l~~~~~~v~a~~a~ 166 (177)
T PF06259_consen 90 GAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMGVDS---ASDLGVPPGHVYAMTAP 166 (177)
T ss_pred HHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCCCCC---HHHcCCCCCcEEEeeCC
Confidence 3455666666665544 5568999999999999988888867789999999988654322 22232223558888888
Q ss_pred CCCCC
Q 030264 112 KDGLC 116 (180)
Q Consensus 112 ~D~~~ 116 (180)
+|++-
T Consensus 167 ~D~I~ 171 (177)
T PF06259_consen 167 GDPIA 171 (177)
T ss_pred CCCcc
Confidence 88764
No 173
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.70 E-value=0.0001 Score=54.32 Aligned_cols=105 Identities=12% Similarity=0.079 Sum_probs=56.1
Q ss_pred CceEEEEEeccCCCCCCCCCCCc----hHHHHHHHHHHHHHHHhh--CCCCcEEEEeeChhHHHHHHHhhcccc--ccce
Q 030264 7 DAVEVVTFDYPYIAGGKRKAPPK----AEKLVEFHTDVVKGAVAK--FPGHPLILAGKSMGSRVSCMVACKEDI--AASA 78 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~--~~~~ 78 (180)
.++.|+++||.... ...-.. ....-..+...+..+... .+.+++.++|||+||++|-.++..... ++..
T Consensus 103 ~d~NVI~VDWs~~a---~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~r 179 (331)
T PF00151_consen 103 GDYNVIVVDWSRGA---SNNYPQAVANTRLVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGR 179 (331)
T ss_dssp S-EEEEEEE-HHHH---SS-HHHHHHHHHHHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSE
T ss_pred CCceEEEEcchhhc---cccccchhhhHHHHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeE
Confidence 58999999998742 111000 111123444445555532 456699999999999999999988655 8999
Q ss_pred EEEeccCCCCCCcccchhhhccC-CCcEEEEeecCCC
Q 030264 79 VLCLGYPLKGMNGAVRDELLLQI-TVPIMFVQGSKDG 114 (180)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~g~~D~ 114 (180)
++.+.+..+..........+.+- ..=|-+||...+.
T Consensus 180 ItgLDPAgP~F~~~~~~~rL~~~DA~fVdvIHT~~~~ 216 (331)
T PF00151_consen 180 ITGLDPAGPLFENNPPSERLDKSDAKFVDVIHTNAGT 216 (331)
T ss_dssp EEEES-B-TTTTTS-TTTS--GGGSSEEEEE-SSES-
T ss_pred EEecCcccccccCCChhHhhhccCCceEEEEEcCCcc
Confidence 99988554432221111112211 2236667776653
No 174
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.68 E-value=0.00043 Score=51.01 Aligned_cols=72 Identities=18% Similarity=0.170 Sum_probs=54.3
Q ss_pred CceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEE
Q 030264 7 DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVL 80 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~ 80 (180)
.-|.|+++.+||+ |-+..+.+..--..+...++..++-+++-.+..+=|-.||+.|+..+|..+|+.|.++=
T Consensus 187 ~~FEVI~PSlPGy--gwSd~~sk~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlH 258 (469)
T KOG2565|consen 187 YAFEVIAPSLPGY--GWSDAPSKTGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLH 258 (469)
T ss_pred eeEEEeccCCCCc--ccCcCCccCCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhh
Confidence 3589999999998 43333322222234566677777777788899999999999999999999998877663
No 175
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.68 E-value=0.0021 Score=45.08 Aligned_cols=127 Identities=15% Similarity=0.170 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccc-----cccceEEEeccCCC-C---CCcccc----------
Q 030264 34 VEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED-----IAASAVLCLGYPLK-G---MNGAVR---------- 94 (180)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~-----~~~~~~~~~~~~~~-~---~~~~~~---------- 94 (180)
...+..++.++.++++..++-++||||||.-...++..+. +.+..++.++.|+. + +++...
T Consensus 119 s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~~~~~ 198 (288)
T COG4814 119 SKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDGPGLI 198 (288)
T ss_pred HHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeeccCcccc
Confidence 4566777788888999999999999999999998887621 35788888887765 1 111110
Q ss_pred -h-------hhhccC--CCcEEEEeecCC------CCCChHHHHHHHHHccCC---cEEEEEcC--CCCccccccccccc
Q 030264 95 -D-------ELLLQI--TVPIMFVQGSKD------GLCPLDKLEAVRKKMKSL---SELHLIDG--GDHSFKIGKKHLQT 153 (180)
Q Consensus 95 -~-------~~~~~~--~~P~l~i~g~~D------~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~H~~~~~~~~~~~ 153 (180)
. .....+ .+-+|.|.|+-| -.+|...+...+..+..+ ..-.+++| +.|.-..
T Consensus 199 ~t~y~~y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~lh------- 271 (288)
T COG4814 199 KTPYYDYIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKLH------- 271 (288)
T ss_pred CcHHHHHHHhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhccC-------
Confidence 0 001111 346899999754 446666666666666654 22224554 6777332
Q ss_pred cccchhHHHHHHHHHHHHHHH
Q 030264 154 MGTTQDEMEGLAVQAIAAFIS 174 (180)
Q Consensus 154 ~~~~~~~~~~~~~~~i~~fl~ 174 (180)
++ ..+.+.+..||-
T Consensus 272 ------en-~~v~~yv~~FLw 285 (288)
T COG4814 272 ------EN-PTVAKYVKNFLW 285 (288)
T ss_pred ------CC-hhHHHHHHHHhh
Confidence 11 346666777764
No 176
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.62 E-value=0.00072 Score=51.94 Aligned_cols=79 Identities=19% Similarity=0.237 Sum_probs=55.1
Q ss_pred CceEEEEEeccCCCCCCCCCC----------CchHHHHHHHHHHHHHHHhhC---CCCcEEEEeeChhHHHHHHHhhccc
Q 030264 7 DAVEVVTFDYPYIAGGKRKAP----------PKAEKLVEFHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVACKED 73 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~ 73 (180)
-|-.++.++.|++ |.+.|. ...++.++|+...+..++..+ ...|++++|-|.||.+|..+-.++|
T Consensus 58 ~~a~~v~lEHRyY--G~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP 135 (434)
T PF05577_consen 58 FGALVVALEHRYY--GKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYP 135 (434)
T ss_dssp HTEEEEEE--TTS--TTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-T
T ss_pred cCCcEEEeehhhh--cCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCC
Confidence 4778999999999 555443 223445677888888887654 3349999999999999999999999
Q ss_pred cccceEEEeccCCC
Q 030264 74 IAASAVLCLGYPLK 87 (180)
Q Consensus 74 ~~~~~~~~~~~~~~ 87 (180)
..+.+.+..+.|+.
T Consensus 136 ~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 136 HLFDGAWASSAPVQ 149 (434)
T ss_dssp TT-SEEEEET--CC
T ss_pred CeeEEEEeccceee
Confidence 99999999887765
No 177
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.57 E-value=0.00025 Score=56.77 Aligned_cols=78 Identities=19% Similarity=0.267 Sum_probs=48.8
Q ss_pred ceEEEEEeccCCCCCCCC-CCCchHHHHHHHHHHHHHHHhhCCC---------CcEEEEeeChhHHHHHHHhhc---ccc
Q 030264 8 AVEVVTFDYPYIAGGKRK-APPKAEKLVEFHTDVVKGAVAKFPG---------HPLILAGKSMGSRVSCMVACK---EDI 74 (180)
Q Consensus 8 g~~v~~~d~~g~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---------~~i~l~G~S~Gg~~a~~~a~~---~~~ 74 (180)
.|.-+++|+-+- .+. .-....+..+.+.++++.+.+.+.+ ..|+++||||||.+|...+.. .+.
T Consensus 132 ~~DFFaVDFnEe---~tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~ 208 (973)
T KOG3724|consen 132 SFDFFAVDFNEE---FTAMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQG 208 (973)
T ss_pred ccceEEEcccch---hhhhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccc
Confidence 456667776651 111 1122334456677777766654332 249999999999999888766 345
Q ss_pred ccceEEEeccCCCC
Q 030264 75 AASAVLCLGYPLKG 88 (180)
Q Consensus 75 ~~~~~~~~~~~~~~ 88 (180)
.+.-++..+.|...
T Consensus 209 sVntIITlssPH~a 222 (973)
T KOG3724|consen 209 SVNTIITLSSPHAA 222 (973)
T ss_pred hhhhhhhhcCcccC
Confidence 67777777766543
No 178
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.46 E-value=0.00058 Score=47.59 Aligned_cols=50 Identities=22% Similarity=0.279 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcc----ccccceEEEeccCC
Q 030264 36 FHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE----DIAASAVLCLGYPL 86 (180)
Q Consensus 36 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~~~~~~~~~~~~~~ 86 (180)
...+.++.+...++. ++.+.|||.||.+|..++... ..+|..+.....|.
T Consensus 70 ~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 70 SALAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 344445555555555 599999999999999999872 34677887766554
No 179
>PLN02408 phospholipase A1
Probab=97.39 E-value=0.0013 Score=48.94 Aligned_cols=78 Identities=15% Similarity=0.282 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhhCCCC--cEEEEeeChhHHHHHHHhhccccc-----cceEEEeccCCCCCCcccchhhhccCCCcEEEE
Q 030264 36 FHTDVVKGAVAKFPGH--PLILAGKSMGSRVSCMVACKEDIA-----ASAVLCLGYPLKGMNGAVRDELLLQITVPIMFV 108 (180)
Q Consensus 36 ~~~~~~~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 108 (180)
.+.+.+..+.+.++.. +|.+.|||+||.+|..+|..-... .-.++.++.|-.+. ..+ .+.+.+....++=|
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPRVGN-~~F-a~~~~~~~~~~lRV 260 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPRVGN-RSF-RRQLEKQGTKVLRI 260 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCCccc-HHH-HHHHHhcCCcEEEE
Confidence 3444455555556544 599999999999999998762111 12244444443321 111 12233334556666
Q ss_pred eecCCCC
Q 030264 109 QGSKDGL 115 (180)
Q Consensus 109 ~g~~D~~ 115 (180)
.-..|.+
T Consensus 261 vN~~D~V 267 (365)
T PLN02408 261 VNSDDVI 267 (365)
T ss_pred EeCCCCc
Confidence 6777744
No 180
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.37 E-value=0.0021 Score=47.32 Aligned_cols=75 Identities=13% Similarity=0.086 Sum_probs=50.8
Q ss_pred eEEEEEeccCCCC--CCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc--------cccccce
Q 030264 9 VEVVTFDYPYIAG--GKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK--------EDIAASA 78 (180)
Q Consensus 9 ~~v~~~d~~g~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~--------~~~~~~~ 78 (180)
...+.|-||-.+. |-..+.+.......+++..+..+.+..+.++|.|++||||..+++..+.+ .+.+|+-
T Consensus 147 ~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~n 226 (377)
T COG4782 147 GVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKN 226 (377)
T ss_pred cceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhh
Confidence 4567777876520 11112223334457888888888888778899999999999999988865 1235666
Q ss_pred EEEec
Q 030264 79 VLCLG 83 (180)
Q Consensus 79 ~~~~~ 83 (180)
+++.+
T Consensus 227 ViLAa 231 (377)
T COG4782 227 VILAA 231 (377)
T ss_pred eEeeC
Confidence 77644
No 181
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=97.37 E-value=0.00026 Score=40.91 Aligned_cols=36 Identities=14% Similarity=0.123 Sum_probs=24.9
Q ss_pred ccCCceEEEEEeccCCCCCCCC----CCCchHHHHHHHHHHH
Q 030264 4 KALDAVEVVTFDYPYIAGGKRK----APPKAEKLVEFHTDVV 41 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~----~~~~~~~~~~~~~~~~ 41 (180)
++++||.|+++|+||+ |.|. ..+.++...+|+.+.+
T Consensus 39 L~~~G~~V~~~D~rGh--G~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 39 LAEQGYAVFAYDHRGH--GRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred HHhCCCEEEEECCCcC--CCCCCcccccCCHHHHHHHHHHHh
Confidence 4678999999999999 4443 3355555666665544
No 182
>PLN02454 triacylglycerol lipase
Probab=97.33 E-value=0.00058 Score=51.41 Aligned_cols=38 Identities=16% Similarity=0.363 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHhhCCCCc--EEEEeeChhHHHHHHHhhc
Q 030264 34 VEFHTDVVKGAVAKFPGHP--LILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~--i~l~G~S~Gg~~a~~~a~~ 71 (180)
.+++...++.+.+.++..+ |++.|||+||.+|+.+|..
T Consensus 209 r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 209 RSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3455555666666676654 9999999999999999865
No 183
>PLN03037 lipase class 3 family protein; Provisional
Probab=97.32 E-value=0.0015 Score=50.36 Aligned_cols=67 Identities=22% Similarity=0.278 Sum_probs=39.6
Q ss_pred CcEEEEeeChhHHHHHHHhhc----cccc-cceEEEeccCCCCCCcccchhhhccCCCcEEEEeecCCCC--CChH
Q 030264 51 HPLILAGKSMGSRVSCMVACK----EDIA-ASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQGSKDGL--CPLD 119 (180)
Q Consensus 51 ~~i~l~G~S~Gg~~a~~~a~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~--~~~~ 119 (180)
.+|.+.|||+||.+|+..|.. .+.. .-.++.++.|-.+. ..-.+.+......++=|.-..|.+ +|+.
T Consensus 318 ~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPRVGN--~aFA~~~~~l~~~~lRVVN~~DiVP~lPp~ 391 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPRVGN--LAFKEKLNELGVKVLRVVNKQDIVPKLPGI 391 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCCccC--HHHHHHHHhcCCCEEEEEECCCccccCCch
Confidence 379999999999999998855 1211 11233444332211 111222344566788888888855 5553
No 184
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.30 E-value=0.00061 Score=53.15 Aligned_cols=75 Identities=13% Similarity=0.090 Sum_probs=49.1
Q ss_pred ceEEEEEecc-CCCCCCC--C-CCCchHHHHHHHHHHHHHHHhh---C--CCCcEEEEeeChhHHHHHHHhhc--ccccc
Q 030264 8 AVEVVTFDYP-YIAGGKR--K-APPKAEKLVEFHTDVVKGAVAK---F--PGHPLILAGKSMGSRVSCMVACK--EDIAA 76 (180)
Q Consensus 8 g~~v~~~d~~-g~~~g~~--~-~~~~~~~~~~~~~~~~~~~~~~---~--~~~~i~l~G~S~Gg~~a~~~a~~--~~~~~ 76 (180)
|+.|+.++|| |.. |.- . ..........|...+++|+++. + +.++|+++|+|.||.++..++.. .+..+
T Consensus 125 ~~~vv~~~yRlg~~-g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf 203 (493)
T cd00312 125 NVIVVSINYRLGVL-GFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLF 203 (493)
T ss_pred CEEEEEeccccccc-ccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHH
Confidence 4999999999 421 111 0 1111222356777777777664 3 34599999999999999988876 23456
Q ss_pred ceEEEec
Q 030264 77 SAVLCLG 83 (180)
Q Consensus 77 ~~~~~~~ 83 (180)
.++|+.+
T Consensus 204 ~~~i~~s 210 (493)
T cd00312 204 HRAISQS 210 (493)
T ss_pred HHHhhhc
Confidence 7777655
No 185
>PLN00413 triacylglycerol lipase
Probab=97.28 E-value=0.00095 Score=50.96 Aligned_cols=85 Identities=19% Similarity=0.210 Sum_probs=49.7
Q ss_pred HHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc---c-----ccccceEEEeccCCCCCCcc--cchhhhccCCCcE
Q 030264 36 FHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK---E-----DIAASAVLCLGYPLKGMNGA--VRDELLLQITVPI 105 (180)
Q Consensus 36 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~---~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~ 105 (180)
.+...++.+...++..++.+.|||+||.+|..++.. + ..++..+...+.|-.+...- +-...++....+.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRVGN~~FA~~~~~~l~~~~~~~ 348 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRVGDEDFGIFMKDKLKEFDVKY 348 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCCccHHHHHHHHhhhcccCcce
Confidence 344556666666777799999999999999998853 1 12344566666553322110 0111223334456
Q ss_pred EEEeecCCCC--CChHH
Q 030264 106 MFVQGSKDGL--CPLDK 120 (180)
Q Consensus 106 l~i~g~~D~~--~~~~~ 120 (180)
+=+.-.+|.+ +|+..
T Consensus 349 ~RvVn~~DiVPrLP~~~ 365 (479)
T PLN00413 349 ERYVYCNDMVPRLPFDD 365 (479)
T ss_pred EEEEECCCccCCcCCCC
Confidence 6666777743 55543
No 186
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.28 E-value=0.00047 Score=47.79 Aligned_cols=64 Identities=14% Similarity=0.103 Sum_probs=36.9
Q ss_pred cCCceE---EEEEeccCCCCCCCCCCCch---HHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc
Q 030264 5 ALDAVE---VVTFDYPYIAGGKRKAPPKA---EKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 5 a~~g~~---v~~~d~~g~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
.++||. +++++|-... + ....... ......+.+.++.+++.-.. +|-|+||||||.++..+...
T Consensus 26 ~~~GY~~~~vya~tyg~~~-~-~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 26 KAAGYCDSEVYALTYGSGN-G-SPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp HHTT--CCCEEEE--S-CC-H-HTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHH
T ss_pred HHcCCCcceeEeccCCCCC-C-CCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHH
Confidence 567999 7999996532 1 0000111 11235677777777776566 99999999999998888754
No 187
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.28 E-value=0.00063 Score=50.45 Aligned_cols=53 Identities=26% Similarity=0.192 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccc--cccceEEEeccCCC
Q 030264 35 EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED--IAASAVLCLGYPLK 87 (180)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~~~~~~~~~~~ 87 (180)
+.+...++.+......+++.++||||||.++..++...+ ..++.++.++.|-.
T Consensus 111 ~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 111 EQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred HHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 444555555555556679999999999999998888866 78999998886633
No 188
>PLN02162 triacylglycerol lipase
Probab=97.27 E-value=0.0011 Score=50.46 Aligned_cols=83 Identities=14% Similarity=0.228 Sum_probs=45.6
Q ss_pred HHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc---c-c----cccceEEEeccCCCCCCccc--chhhhccCCCcEE
Q 030264 37 HTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK---E-D----IAASAVLCLGYPLKGMNGAV--RDELLLQITVPIM 106 (180)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~---~-~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~l 106 (180)
+.+.+.......+..++.+.|||+||.+|..++.. + . ..+.+++..+.|-.+...-. -...++....+..
T Consensus 264 I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRVGn~~FA~~~~~~~~~~~~~~~ 343 (475)
T PLN02162 264 IRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRVGDEDFGEFMKGVVKKHGIEYE 343 (475)
T ss_pred HHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCccCHHHHHHHHhhhhcCCCceE
Confidence 34444445555677799999999999999998653 1 1 12445666665533222100 0111222234444
Q ss_pred EEeecCCCC--CChH
Q 030264 107 FVQGSKDGL--CPLD 119 (180)
Q Consensus 107 ~i~g~~D~~--~~~~ 119 (180)
=+.-.+|.+ +|++
T Consensus 344 RvVn~nDiVPrlP~~ 358 (475)
T PLN02162 344 RFVYNNDVVPRVPFD 358 (475)
T ss_pred EEEeCCCcccccCCC
Confidence 455577744 5654
No 189
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=97.26 E-value=0.001 Score=45.51 Aligned_cols=38 Identities=26% Similarity=0.266 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHhhCC-CCcEEEEeeChhHHHHHHHhhc
Q 030264 34 VEFHTDVVKGAVAKFP-GHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 34 ~~~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
..|+.++.++..++.+ +.+++|+|||.|+.+..+++.+
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHH
Confidence 5788888888777765 4599999999999999999987
No 190
>PLN02310 triacylglycerol lipase
Probab=97.22 E-value=0.0019 Score=48.61 Aligned_cols=66 Identities=24% Similarity=0.276 Sum_probs=40.1
Q ss_pred CcEEEEeeChhHHHHHHHhhcc----ccccceEEEeccCCCCCCcccchhhhccCCCcEEEEeecCCCC--CCh
Q 030264 51 HPLILAGKSMGSRVSCMVACKE----DIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQGSKDGL--CPL 118 (180)
Q Consensus 51 ~~i~l~G~S~Gg~~a~~~a~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~--~~~ 118 (180)
.+|.+.|||+||.+|+.+|..- +...-.++.++.|-.+. ..+ .+.+.+....++=+.-..|.+ +|+
T Consensus 209 ~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRVGN-~~F-a~~~~~~~~~~~RVvn~~DiVP~lPp 280 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRVGN-IAF-KEKLNELGVKTLRVVVKQDKVPKLPG 280 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCccc-HHH-HHHHHhcCCCEEEEEECCCccCccCc
Confidence 3799999999999999988652 22212345555554321 111 222334456677778888855 565
No 191
>PLN02847 triacylglycerol lipase
Probab=97.17 E-value=0.0065 Score=47.82 Aligned_cols=45 Identities=18% Similarity=0.454 Sum_probs=31.2
Q ss_pred HHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc--cccccceEEEecc
Q 030264 40 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACK--EDIAASAVLCLGY 84 (180)
Q Consensus 40 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~~~~~~~~~~~~ 84 (180)
.+..+...+++-++.++|||+||.+|..++.. ....+..+.|++|
T Consensus 240 ~L~kal~~~PdYkLVITGHSLGGGVAALLAilLRe~~~fssi~CyAF 286 (633)
T PLN02847 240 CLLKALDEYPDFKIKIVGHSLGGGTAALLTYILREQKEFSSTTCVTF 286 (633)
T ss_pred HHHHHHHHCCCCeEEEeccChHHHHHHHHHHHHhcCCCCCCceEEEe
Confidence 34444455676699999999999999998866 2233555556554
No 192
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=97.15 E-value=0.0036 Score=46.96 Aligned_cols=73 Identities=12% Similarity=0.151 Sum_probs=53.7
Q ss_pred EEEEEeccCCCCCCCCCC------CchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceEEEec
Q 030264 10 EVVTFDYPYIAGGKRKAP------PKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLG 83 (180)
Q Consensus 10 ~v~~~d~~g~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~ 83 (180)
+-+.+++|.+ +.|++. ....+...|...+++.++.-++. +.+-.|-|-||+.++.+=.-+|..+++.|...
T Consensus 90 NQl~vEhRfF--~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~-kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYV 166 (448)
T PF05576_consen 90 NQLSVEHRFF--GPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPG-KWISTGGSKGGMTAVYYRRFYPDDVDGTVAYV 166 (448)
T ss_pred ceEEEEEeec--cCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccC-CceecCcCCCceeEEEEeeeCCCCCCeeeeee
Confidence 3456788888 444443 23445567888888888887766 79999999999988877777898999888744
Q ss_pred cC
Q 030264 84 YP 85 (180)
Q Consensus 84 ~~ 85 (180)
.|
T Consensus 167 AP 168 (448)
T PF05576_consen 167 AP 168 (448)
T ss_pred cc
Confidence 33
No 193
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.13 E-value=0.00088 Score=52.51 Aligned_cols=58 Identities=19% Similarity=0.162 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcc---------------ccccceEEEeccCCCC
Q 030264 31 EKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE---------------DIAASAVLCLGYPLKG 88 (180)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~---------------~~~~~~~~~~~~~~~~ 88 (180)
......+...++.+.....+++++|+||||||.++..+.... ...|+..|.++.|+.+
T Consensus 193 d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 344566777777666655567999999999999999877531 1247788888877653
No 194
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.08 E-value=0.0025 Score=49.35 Aligned_cols=65 Identities=14% Similarity=0.193 Sum_probs=43.4
Q ss_pred CceEEEEEecc---CCCCCCCC-CCCchHHHHHHHHHHHHHHHhhCC---CCcEEEEeeChhHHHHHHHhhc
Q 030264 7 DAVEVVTFDYP---YIAGGKRK-APPKAEKLVEFHTDVVKGAVAKFP---GHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 7 ~g~~v~~~d~~---g~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
+-..++.+|.| |++.+... .....+...+++...++.....++ ..+++|+|+|+||..+..+|..
T Consensus 120 ~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~ 191 (462)
T PTZ00472 120 NEAYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYR 191 (462)
T ss_pred cccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHH
Confidence 34678889987 44322211 122334556777777776655444 3699999999999999888866
No 195
>PLN02571 triacylglycerol lipase
Probab=97.03 E-value=0.0074 Score=45.67 Aligned_cols=36 Identities=19% Similarity=0.346 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhhCCCC--cEEEEeeChhHHHHHHHhhc
Q 030264 36 FHTDVVKGAVAKFPGH--PLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 36 ~~~~~~~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~ 71 (180)
++...+..+.+.++.. +|++.|||+||.+|..+|..
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 3444445555555543 69999999999999998865
No 196
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.00 E-value=0.0013 Score=49.99 Aligned_cols=62 Identities=13% Similarity=0.149 Sum_probs=45.1
Q ss_pred CCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcccc--------ccceEEEeccCCCC
Q 030264 27 PPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI--------AASAVLCLGYPLKG 88 (180)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~--------~~~~~~~~~~~~~~ 88 (180)
++..+.....++..++..-.....+|+++++|||||.+...+....+. .|++++.++.|+.+
T Consensus 158 ~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~lG 227 (473)
T KOG2369|consen 158 SEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPWLG 227 (473)
T ss_pred hhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchhcC
Confidence 444555566777777777666676899999999999999999988655 35566666655543
No 197
>PLN02802 triacylglycerol lipase
Probab=96.97 E-value=0.0065 Score=46.94 Aligned_cols=76 Identities=25% Similarity=0.364 Sum_probs=41.2
Q ss_pred HHHHHHHHhhCCCC--cEEEEeeChhHHHHHHHhhcc----ccc-cceEEEeccCCCCCCcccchhhhccCCCcEEEEee
Q 030264 38 TDVVKGAVAKFPGH--PLILAGKSMGSRVSCMVACKE----DIA-ASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQG 110 (180)
Q Consensus 38 ~~~~~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 110 (180)
.+.+..+.+.++.. +|.+.|||+||.+|..+|..- +.. .-.++.++.|-.+.. .+ .+.+......++=|.-
T Consensus 315 l~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsPRVGN~-aF-A~~~~~~~~~~~RVVN 392 (509)
T PLN02802 315 VGEVRRLMEKYKGEELSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGPRVGNR-AF-ADRLNARGVKVLRVVN 392 (509)
T ss_pred HHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCCCcccH-HH-HHHHHhcCCcEEEEec
Confidence 33344455555543 799999999999999988762 111 112444444422211 11 1222333445666666
Q ss_pred cCCCC
Q 030264 111 SKDGL 115 (180)
Q Consensus 111 ~~D~~ 115 (180)
..|.+
T Consensus 393 ~~DiV 397 (509)
T PLN02802 393 AQDVV 397 (509)
T ss_pred CCCee
Confidence 77744
No 198
>PLN02934 triacylglycerol lipase
Probab=96.96 E-value=0.0018 Score=49.85 Aligned_cols=37 Identities=11% Similarity=0.232 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc
Q 030264 35 EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
..+...++.+.+.++..++++.|||+||.+|..++..
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHH
Confidence 3466667777777888899999999999999999753
No 199
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=96.85 E-value=0.0052 Score=42.72 Aligned_cols=21 Identities=14% Similarity=0.252 Sum_probs=17.8
Q ss_pred CcEEEEeeChhHHHHHHHhhc
Q 030264 51 HPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 51 ~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
.+|.++||||||.++-.+...
T Consensus 78 ~~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALGL 98 (217)
T ss_pred ccceEEEecccHHHHHHHHHH
Confidence 489999999999998776654
No 200
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=96.83 E-value=0.074 Score=40.19 Aligned_cols=48 Identities=21% Similarity=0.193 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhhCC----CCcEEEEeeChhHHHHHHHhhccccccceEEEec
Q 030264 36 FHTDVVKGAVAKFP----GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLG 83 (180)
Q Consensus 36 ~~~~~~~~~~~~~~----~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~ 83 (180)
|...++..+...++ .-|++.+|+|.||.+|...+.--|-.+++++=-+
T Consensus 165 D~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns 216 (403)
T PF11144_consen 165 DIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNS 216 (403)
T ss_pred HHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecC
Confidence 44444555544332 2489999999999999999988887888877533
No 201
>PLN02324 triacylglycerol lipase
Probab=96.80 E-value=0.0033 Score=47.47 Aligned_cols=37 Identities=19% Similarity=0.336 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhhCCCC--cEEEEeeChhHHHHHHHhhc
Q 030264 35 EFHTDVVKGAVAKFPGH--PLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 35 ~~~~~~~~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~ 71 (180)
+.+...+..+...++.. +|.+.|||+||.+|+.+|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 44445555566666653 69999999999999999864
No 202
>PLN02719 triacylglycerol lipase
Probab=96.79 E-value=0.01 Score=45.96 Aligned_cols=36 Identities=19% Similarity=0.326 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhhCCC-----CcEEEEeeChhHHHHHHHhhc
Q 030264 36 FHTDVVKGAVAKFPG-----HPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 36 ~~~~~~~~~~~~~~~-----~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
++...+..+.+.++. .+|.+.|||+||.+|..+|..
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 344444555555543 379999999999999998854
No 203
>PLN02753 triacylglycerol lipase
Probab=96.63 E-value=0.019 Score=44.63 Aligned_cols=36 Identities=19% Similarity=0.253 Sum_probs=25.7
Q ss_pred HHHHHHHHHHhhCC-----CCcEEEEeeChhHHHHHHHhhc
Q 030264 36 FHTDVVKGAVAKFP-----GHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 36 ~~~~~~~~~~~~~~-----~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
.+...++.+...++ ..+|.+.|||+||.+|+.+|..
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 34444445555553 3489999999999999999854
No 204
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.61 E-value=0.007 Score=45.47 Aligned_cols=77 Identities=16% Similarity=0.163 Sum_probs=55.8
Q ss_pred ceEEEEEeccCCCCCCCCCC-------------CchHHHHHHHHHHHHHHHhhCCC--CcEEEEeeChhHHHHHHHhhcc
Q 030264 8 AVEVVTFDYPYIAGGKRKAP-------------PKAEKLVEFHTDVVKGAVAKFPG--HPLILAGKSMGSRVSCMVACKE 72 (180)
Q Consensus 8 g~~v~~~d~~g~~~g~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~ 72 (180)
+-.++-.+.|++ |.+.|. ...++...|+...+..+++.... .+|+.+|-|.||+++..+-.++
T Consensus 111 ~AllVFaEHRyY--GeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKY 188 (492)
T KOG2183|consen 111 KALLVFAEHRYY--GESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKY 188 (492)
T ss_pred CceEEEeehhcc--ccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcC
Confidence 556677788888 443322 12344467788888888876432 3899999999999999999999
Q ss_pred ccccceEEEeccCC
Q 030264 73 DIAASAVLCLGYPL 86 (180)
Q Consensus 73 ~~~~~~~~~~~~~~ 86 (180)
|-.+.+.+..+.|+
T Consensus 189 PHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 189 PHIVLGALAASAPV 202 (492)
T ss_pred hhhhhhhhhccCce
Confidence 98887777655553
No 205
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.58 E-value=0.011 Score=43.81 Aligned_cols=68 Identities=19% Similarity=0.223 Sum_probs=47.5
Q ss_pred CCCCcEEEEeeChhHHHHHHHhhccc-----cccceEEEeccCCCCCCcccchhhhccCCCcEEEEeecCCCCC
Q 030264 48 FPGHPLILAGKSMGSRVSCMVACKED-----IAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQGSKDGLC 116 (180)
Q Consensus 48 ~~~~~i~l~G~S~Gg~~a~~~a~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 116 (180)
....||.++|||+|+.+....+..-. ..|.-+++++.|.......+. ..-..++-.+.-+++++|.+.
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~W~-~~r~vVsGr~vN~YS~~D~vL 289 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEEWR-KIRSVVSGRLVNVYSENDWVL 289 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHHHH-HHHHHccCeEEEEecCcHHHH
Confidence 34558999999999999887776522 347788888877754332222 122446778999999999764
No 206
>PLN02761 lipase class 3 family protein
Probab=96.58 E-value=0.016 Score=44.99 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=25.1
Q ss_pred HHHHHHHHHHhhCC------CCcEEEEeeChhHHHHHHHhhc
Q 030264 36 FHTDVVKGAVAKFP------GHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 36 ~~~~~~~~~~~~~~------~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
++...+..+.+.++ .-+|.+.|||+||.+|...|..
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 33444445555552 2379999999999999998854
No 207
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=96.55 E-value=0.0084 Score=44.53 Aligned_cols=37 Identities=14% Similarity=0.315 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc
Q 030264 35 EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
..+.+.+..++..++.-+|.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 4566667777777887799999999999999999976
No 208
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=96.55 E-value=0.0062 Score=45.10 Aligned_cols=99 Identities=14% Similarity=0.216 Sum_probs=72.6
Q ss_pred hCCCCcEEEEeeChhHHHHHHHhhccccccceEEEeccCCC---------------------------CCCcccc-----
Q 030264 47 KFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK---------------------------GMNGAVR----- 94 (180)
Q Consensus 47 ~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~----- 94 (180)
.+..+.+.+.|-|--|..++..|-.. +++.+++-..+-.- +..+...
T Consensus 230 q~~Ik~F~VTGaSKRgWttwLTAIaD-prv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp~fk 308 (507)
T COG4287 230 QVEIKGFMVTGASKRGWTTWLTAIAD-PRVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETPLFK 308 (507)
T ss_pred heeeeeEEEeccccchHHHHHHHhcC-cchhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCHHHH
Confidence 35556899999999999999988875 45666654221100 0001000
Q ss_pred -------------hhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCcccc
Q 030264 95 -------------DELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKI 146 (180)
Q Consensus 95 -------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 146 (180)
+....++..|-.++.+..|.+.+++++.-++..+++..-+.++|+..|....
T Consensus 309 qL~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n 373 (507)
T COG4287 309 QLLEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLIN 373 (507)
T ss_pred HHHHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhH
Confidence 1133567889999999999999999999999999988899999999998765
No 209
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=96.48 E-value=0.0076 Score=46.27 Aligned_cols=80 Identities=18% Similarity=0.079 Sum_probs=48.4
Q ss_pred ccCCc-eEEEEEeccC----CCCCCCCC--CCchH-HHHHHHHHHHHHHHh---hCCC--CcEEEEeeChhHHHHHHHhh
Q 030264 4 KALDA-VEVVTFDYPY----IAGGKRKA--PPKAE-KLVEFHTDVVKGAVA---KFPG--HPLILAGKSMGSRVSCMVAC 70 (180)
Q Consensus 4 ~a~~g-~~v~~~d~~g----~~~g~~~~--~~~~~-~~~~~~~~~~~~~~~---~~~~--~~i~l~G~S~Gg~~a~~~a~ 70 (180)
++++| +.|+.+|||- +-+.++.. ..... --..|...+++|+++ .+++ ++|.|+|+|.|++.++.+++
T Consensus 120 La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla 199 (491)
T COG2272 120 LAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLA 199 (491)
T ss_pred HHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhc
Confidence 46677 9999999984 11111111 11101 124566666777765 3443 48999999999999988887
Q ss_pred cc--ccccceEEEec
Q 030264 71 KE--DIAASAVLCLG 83 (180)
Q Consensus 71 ~~--~~~~~~~~~~~ 83 (180)
.. ...+..+|+.+
T Consensus 200 ~P~AkGLF~rAi~~S 214 (491)
T COG2272 200 VPSAKGLFHRAIALS 214 (491)
T ss_pred CccchHHHHHHHHhC
Confidence 71 22344445544
No 210
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.45 E-value=0.011 Score=46.61 Aligned_cols=80 Identities=18% Similarity=0.110 Sum_probs=49.2
Q ss_pred cCCceEEEEEeccC----CCCCCCCCCCchHHHHHHHHHHHHHHHhh---CCC--CcEEEEeeChhHHHHHHHhhcc--c
Q 030264 5 ALDAVEVVTFDYPY----IAGGKRKAPPKAEKLVEFHTDVVKGAVAK---FPG--HPLILAGKSMGSRVSCMVACKE--D 73 (180)
Q Consensus 5 a~~g~~v~~~d~~g----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~i~l~G~S~Gg~~a~~~a~~~--~ 73 (180)
+.++..|+.++||- +-............-..|...+++|+++. +++ ++|.|+|+|.||..+...+... .
T Consensus 153 ~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~ 232 (535)
T PF00135_consen 153 ASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSK 232 (535)
T ss_dssp HHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGT
T ss_pred cCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccc
Confidence 45689999999984 21111111111334456777778888774 444 3899999999999988777662 3
Q ss_pred cccceEEEecc
Q 030264 74 IAASAVLCLGY 84 (180)
Q Consensus 74 ~~~~~~~~~~~ 84 (180)
..+.++|+.+.
T Consensus 233 ~LF~raI~~SG 243 (535)
T PF00135_consen 233 GLFHRAILQSG 243 (535)
T ss_dssp TSBSEEEEES-
T ss_pred ccccccccccc
Confidence 56888888774
No 211
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=96.39 E-value=0.0081 Score=43.01 Aligned_cols=38 Identities=16% Similarity=0.375 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcc
Q 030264 35 EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE 72 (180)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 72 (180)
.+..+++..+++.++..+|.+.|||+||.+|..+....
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 45666677788889999999999999999999988875
No 212
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=96.39 E-value=0.0081 Score=43.01 Aligned_cols=38 Identities=16% Similarity=0.375 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcc
Q 030264 35 EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE 72 (180)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 72 (180)
.+..+++..+++.++..+|.+.|||+||.+|..+....
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 45666677788889999999999999999999988875
No 213
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.35 E-value=0.01 Score=39.27 Aligned_cols=40 Identities=23% Similarity=0.372 Sum_probs=32.1
Q ss_pred HHHhh-CCCCcEEEEeeChhHHHHHHHhhccccccceEEEec
Q 030264 43 GAVAK-FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLG 83 (180)
Q Consensus 43 ~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~ 83 (180)
+++++ ++. ...+-|-||||..|..+.-++|..+.++|.++
T Consensus 93 Yv~eEalpg-s~~~sgcsmGayhA~nfvfrhP~lftkvialS 133 (227)
T COG4947 93 YVIEEALPG-STIVSGCSMGAYHAANFVFRHPHLFTKVIALS 133 (227)
T ss_pred HHHHhhcCC-CccccccchhhhhhhhhheeChhHhhhheeec
Confidence 34443 344 56789999999999999999999999998866
No 214
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.18 E-value=0.038 Score=37.98 Aligned_cols=80 Identities=14% Similarity=0.085 Sum_probs=48.2
Q ss_pred cCCceEEEEEeccC----CCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccc--cccce
Q 030264 5 ALDAVEVVTFDYPY----IAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED--IAASA 78 (180)
Q Consensus 5 a~~g~~v~~~d~~g----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~~ 78 (180)
.+.||.|++.+--. +. +.+.+......-.+-+..+...+......+.++++.||.||...+.+..+.+ .++.+
T Consensus 141 v~~Gygviv~N~N~~~kfye-~k~np~kyirt~veh~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~a 219 (297)
T KOG3967|consen 141 VAEGYGVIVLNPNRERKFYE-KKRNPQKYIRTPVEHAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFA 219 (297)
T ss_pred HHcCCcEEEeCCchhhhhhh-cccCcchhccchHHHHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEE
Confidence 45799999887541 21 2222221122223445555555555445568999999999999999999865 34545
Q ss_pred EEEeccC
Q 030264 79 VLCLGYP 85 (180)
Q Consensus 79 ~~~~~~~ 85 (180)
+.+-..+
T Consensus 220 ialTDs~ 226 (297)
T KOG3967|consen 220 IALTDSA 226 (297)
T ss_pred EEeeccc
Confidence 4443334
No 215
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=96.13 E-value=0.031 Score=39.07 Aligned_cols=64 Identities=23% Similarity=0.299 Sum_probs=38.3
Q ss_pred ceEEEEEeccCCC-CCCCCCCCchH-HHHHHHHHHHHHHHhhC-CCCcEEEEeeChhHHHHHHHhhc
Q 030264 8 AVEVVTFDYPYIA-GGKRKAPPKAE-KLVEFHTDVVKGAVAKF-PGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 8 g~~v~~~d~~g~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
|+.+..++||..- ........... ...+....+.+.+.... ..++++++|+|+|+.++...+.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 6788889998721 00011222222 33333444334444322 45689999999999999988876
No 216
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=95.57 E-value=0.15 Score=35.26 Aligned_cols=34 Identities=21% Similarity=0.278 Sum_probs=26.7
Q ss_pred EEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCc
Q 030264 106 MFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHS 143 (180)
Q Consensus 106 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 143 (180)
.++.|++|.+.|+++..++.+. .+.+..++ ++|.
T Consensus 169 ~aiIg~~D~IFpp~nQ~~~W~~---~~~~~~~~-~~Hy 202 (213)
T PF04301_consen 169 KAIIGKKDRIFPPENQKRAWQG---RCTIVEID-APHY 202 (213)
T ss_pred EEEEcCCCEEeCHHHHHHHHhC---cCcEEEec-CCCc
Confidence 4789999999999999887764 25566675 6898
No 217
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.23 E-value=0.44 Score=35.62 Aligned_cols=64 Identities=9% Similarity=0.185 Sum_probs=47.8
Q ss_pred CCcEEEEeecCCCCCChHHHHHHHHHccCC---cEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHhh
Q 030264 102 TVPIMFVQGSKDGLCPLDKLEAVRKKMKSL---SELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSL 177 (180)
Q Consensus 102 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 177 (180)
..+.+.+.++.|.++|.+..+++.+..... ++..-+.++.|..+.. ..+...+....+|++...
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r------------~~p~~y~~~~~~Fl~~~~ 291 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFR------------SFPKTYLKKCSEFLRSVI 291 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeec------------cCcHHHHHHHHHHHHhcc
Confidence 568899999999999999999986665432 4555566788886542 346778888899987753
No 218
>PLN02633 palmitoyl protein thioesterase family protein
Probab=95.18 E-value=0.19 Score=36.72 Aligned_cols=54 Identities=19% Similarity=0.100 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcccc--ccceEEEeccCC
Q 030264 31 EKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI--AASAVLCLGYPL 86 (180)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~--~~~~~~~~~~~~ 86 (180)
....+.+.+.+....+. .. -+.++|+|.||.++-.++.+.+. .++.+|.++.|-
T Consensus 76 ~~Qve~vce~l~~~~~l-~~-G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 76 TQQAEIACEKVKQMKEL-SQ-GYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred HHHHHHHHHHHhhchhh-hC-cEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 33345555555553332 32 59999999999999999988653 689999887653
No 219
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.07 E-value=0.084 Score=40.79 Aligned_cols=80 Identities=15% Similarity=0.122 Sum_probs=58.6
Q ss_pred CCceEEEEEeccCCCCCCCCCCCc----------hHHHHHHHHHHHHHHHhhCC---CCcEEEEeeChhHHHHHHHhhcc
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPPK----------AEKLVEFHTDVVKGAVAKFP---GHPLILAGKSMGSRVSCMVACKE 72 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~---~~~i~l~G~S~Gg~~a~~~a~~~ 72 (180)
+-|-.|+.++.|.+ |.+.+... -.+...|+...++.+..+++ ..+++.+|-|.-|.++..+-..+
T Consensus 116 kfgA~v~~lEHRFY--G~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~y 193 (514)
T KOG2182|consen 116 KFGATVFQLEHRFY--GQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKY 193 (514)
T ss_pred HhCCeeEEeeeecc--ccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhC
Confidence 45888999999999 54433211 12234666666777766653 23899999999999999999999
Q ss_pred ccccceEEEeccCCC
Q 030264 73 DIAASAVLCLGYPLK 87 (180)
Q Consensus 73 ~~~~~~~~~~~~~~~ 87 (180)
|+.+.+.+..+.|+.
T Consensus 194 Pel~~GsvASSapv~ 208 (514)
T KOG2182|consen 194 PELTVGSVASSAPVL 208 (514)
T ss_pred chhheeeccccccee
Confidence 999998888776643
No 220
>PLN02606 palmitoyl-protein thioesterase
Probab=94.26 E-value=0.2 Score=36.54 Aligned_cols=54 Identities=15% Similarity=0.079 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccc--cccceEEEeccCC
Q 030264 31 EKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED--IAASAVLCLGYPL 86 (180)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~~~~~~~~~~ 86 (180)
....+.+.+.+....+. .. -+.++|+|.||.+.-.++.+.+ +.++-+|.++.|-
T Consensus 77 ~~Qv~~vce~l~~~~~L-~~-G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 77 RQQASIACEKIKQMKEL-SE-GYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred HHHHHHHHHHHhcchhh-cC-ceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 33345555555553332 22 5999999999999999998864 3688898877653
No 221
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=94.08 E-value=0.19 Score=34.17 Aligned_cols=64 Identities=19% Similarity=0.235 Sum_probs=45.1
Q ss_pred CCcEEEEeecCCCCCChHHHHHHHHHccC---C-cEEEEEcCCCCc-cccccccccccccchhHHHHHHHHHHHHHHHHh
Q 030264 102 TVPIMFVQGSKDGLCPLDKLEAVRKKMKS---L-SELHLIDGGDHS-FKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKS 176 (180)
Q Consensus 102 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~H~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 176 (180)
++++|-|-|+.|.++.+-.+....+.+.+ . ...++.+|+||. +.... --.+++...+.+|+.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~-----------rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGS-----------RWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccch-----------hhhhhhhHHHHHHHHhC
Confidence 46788899999999998777666555432 2 566788899998 22221 22467888899998763
No 222
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.93 E-value=0.068 Score=41.71 Aligned_cols=61 Identities=15% Similarity=0.116 Sum_probs=46.1
Q ss_pred cEEEEeecCCCCCChHHHHHHHHHcc----C---C----cEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHH
Q 030264 104 PIMFVQGSKDGLCPLDKLEAVRKKMK----S---L----SELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAF 172 (180)
Q Consensus 104 P~l~i~g~~D~~~~~~~~~~~~~~~~----~---~----~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~f 172 (180)
.+++.||..|+.+++....++++.+. . . .++.++||.+|+..... ..+-.....+.+|
T Consensus 355 KLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g-----------~~~~d~l~aL~~W 423 (474)
T PF07519_consen 355 KLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPG-----------PDPFDALTALVDW 423 (474)
T ss_pred eEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCC-----------CCCCCHHHHHHHH
Confidence 59999999999999988888776642 1 1 67889999999965422 1123688889999
Q ss_pred HHH
Q 030264 173 ISK 175 (180)
Q Consensus 173 l~~ 175 (180)
+++
T Consensus 424 VE~ 426 (474)
T PF07519_consen 424 VEN 426 (474)
T ss_pred HhC
Confidence 875
No 223
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=93.82 E-value=0.35 Score=34.62 Aligned_cols=76 Identities=17% Similarity=0.118 Sum_probs=46.4
Q ss_pred CCceEEEEEeccCCCCCC-CCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcc-ccccceEEEec
Q 030264 6 LDAVEVVTFDYPYIAGGK-RKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE-DIAASAVLCLG 83 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~~~~~~~~~~~ 83 (180)
-.|..|+++|.-- |. ........+..+.+.+.+....+ ++. -+.++|.|.||.++-.++..- .+.+...|.++
T Consensus 51 ~~g~~v~~leig~---g~~~s~l~pl~~Qv~~~ce~v~~m~~-lsq-Gynivg~SQGglv~Raliq~cd~ppV~n~ISL~ 125 (296)
T KOG2541|consen 51 LPGSPVYCLEIGD---GIKDSSLMPLWEQVDVACEKVKQMPE-LSQ-GYNIVGYSQGGLVARALIQFCDNPPVKNFISLG 125 (296)
T ss_pred CCCCeeEEEEecC---CcchhhhccHHHHHHHHHHHHhcchh-ccC-ceEEEEEccccHHHHHHHHhCCCCCcceeEecc
Confidence 3466777777643 31 11223334444555555553333 232 599999999999988888763 35677777777
Q ss_pred cCC
Q 030264 84 YPL 86 (180)
Q Consensus 84 ~~~ 86 (180)
.|-
T Consensus 126 gPh 128 (296)
T KOG2541|consen 126 GPH 128 (296)
T ss_pred CCc
Confidence 653
No 224
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=93.72 E-value=0.36 Score=34.85 Aligned_cols=36 Identities=17% Similarity=0.108 Sum_probs=26.9
Q ss_pred cEEEEeeChhHHHHHHHhhccc-cccceEEEeccCCC
Q 030264 52 PLILAGKSMGSRVSCMVACKED-IAASAVLCLGYPLK 87 (180)
Q Consensus 52 ~i~l~G~S~Gg~~a~~~a~~~~-~~~~~~~~~~~~~~ 87 (180)
-+.++|+|.||.+.-.++.+.+ ..++-+|.++.|-.
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred ceeeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 5999999999999999988854 57899998886643
No 225
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.38 E-value=0.22 Score=39.53 Aligned_cols=40 Identities=18% Similarity=0.294 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHhh-CC-CCcEEEEeeChhHHHHHHHhhc
Q 030264 32 KLVEFHTDVVKGAVAK-FP-GHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 32 ~~~~~~~~~~~~~~~~-~~-~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
.+.......++.+... .+ ..+|..+||||||.++=.++..
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLld 546 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLD 546 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHH
Confidence 3444555566666553 23 5699999999999888766644
No 226
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=93.28 E-value=0.4 Score=37.44 Aligned_cols=61 Identities=16% Similarity=0.227 Sum_probs=46.2
Q ss_pred CCcEEEEeecCCCCCChHHHHHHHHHcc-------------------C---------------CcEEEEEcCCCCccccc
Q 030264 102 TVPIMFVQGSKDGLCPLDKLEAVRKKMK-------------------S---------------LSELHLIDGGDHSFKIG 147 (180)
Q Consensus 102 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~-------------------~---------------~~~~~~~~~~~H~~~~~ 147 (180)
..++|+..|+.|.+++....+++.+.++ . +.++..++++||..+.
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~- 442 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPM- 442 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChh-
Confidence 5799999999999999887777765543 0 1233455678888776
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHH
Q 030264 148 KKHLQTMGTTQDEMEGLAVQAIAAFISK 175 (180)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 175 (180)
+.|+.+.+.+..|+..
T Consensus 443 ------------d~P~~~~~~i~~fl~~ 458 (462)
T PTZ00472 443 ------------DQPAVALTMINRFLRN 458 (462)
T ss_pred ------------hHHHHHHHHHHHHHcC
Confidence 7789999999999864
No 227
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=92.88 E-value=0.4 Score=36.59 Aligned_cols=59 Identities=15% Similarity=0.247 Sum_probs=43.4
Q ss_pred CcEEEEeecCCCCCChHHHHHHHHHccC-------------------------CcEEEEEcCCCCccccccccccccccc
Q 030264 103 VPIMFVQGSKDGLCPLDKLEAVRKKMKS-------------------------LSELHLIDGGDHSFKIGKKHLQTMGTT 157 (180)
Q Consensus 103 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~H~~~~~~~~~~~~~~~ 157 (180)
.++|+.+|..|..++.-..+.+.+.+.= +.++.++.++||....
T Consensus 331 irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~----------- 399 (415)
T PF00450_consen 331 IRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQ----------- 399 (415)
T ss_dssp -EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHH-----------
T ss_pred ceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChh-----------
Confidence 6899999999999999999998877531 1246788899999887
Q ss_pred hhHHHHHHHHHHHHHHH
Q 030264 158 QDEMEGLAVQAIAAFIS 174 (180)
Q Consensus 158 ~~~~~~~~~~~i~~fl~ 174 (180)
+.|+.+.+.+..|++
T Consensus 400 --dqP~~a~~m~~~fl~ 414 (415)
T PF00450_consen 400 --DQPEAALQMFRRFLK 414 (415)
T ss_dssp --HSHHHHHHHHHHHHC
T ss_pred --hCHHHHHHHHHHHhc
Confidence 557888888888874
No 228
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=92.19 E-value=0.64 Score=35.48 Aligned_cols=75 Identities=19% Similarity=0.229 Sum_probs=44.9
Q ss_pred CceEEEEEecc-CCCCCCCCCCC------chHHHHHHHHHHHHHHHhhC---CCCcEEEEeeChhHHHHHHHhhc----c
Q 030264 7 DAVEVVTFDYP-YIAGGKRKAPP------KAEKLVEFHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVACK----E 72 (180)
Q Consensus 7 ~g~~v~~~d~~-g~~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~----~ 72 (180)
+-..++-+|.| |. |-|.... ..+...+++...++..-..+ ...++.|.|-|.||..+..+|.. .
T Consensus 84 ~~an~l~iD~PvGt--GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~ 161 (415)
T PF00450_consen 84 KFANLLFIDQPVGT--GFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQN 161 (415)
T ss_dssp GTSEEEEE--STTS--TT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHT
T ss_pred cccceEEEeecCce--EEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcc
Confidence 34678999977 54 3333222 23334455555555444433 34599999999999998888865 1
Q ss_pred ------ccccceEEEec
Q 030264 73 ------DIAASAVLCLG 83 (180)
Q Consensus 73 ------~~~~~~~~~~~ 83 (180)
...++++++.+
T Consensus 162 ~~~~~~~inLkGi~IGn 178 (415)
T PF00450_consen 162 KKGDQPKINLKGIAIGN 178 (415)
T ss_dssp CC--STTSEEEEEEEES
T ss_pred ccccccccccccceecC
Confidence 24477877644
No 229
>PF03283 PAE: Pectinacetylesterase
Probab=92.15 E-value=0.59 Score=35.28 Aligned_cols=38 Identities=18% Similarity=0.270 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHhh-CC-CCcEEEEeeChhHHHHHHHhhc
Q 030264 34 VEFHTDVVKGAVAK-FP-GHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 34 ~~~~~~~~~~~~~~-~~-~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
..-+..+++++... ++ .++++|.|.|.||.-++..+..
T Consensus 137 ~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred HHHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHH
Confidence 45677778888776 44 4589999999999998877654
No 230
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=91.16 E-value=0.91 Score=33.63 Aligned_cols=59 Identities=15% Similarity=0.152 Sum_probs=44.1
Q ss_pred CcEEEEeecCCCCCChHHHHHHHHHccC-----------------------C-cEEEEEcCCCCccccccccccccccch
Q 030264 103 VPIMFVQGSKDGLCPLDKLEAVRKKMKS-----------------------L-SELHLIDGGDHSFKIGKKHLQTMGTTQ 158 (180)
Q Consensus 103 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~-----------------------~-~~~~~~~~~~H~~~~~~~~~~~~~~~~ 158 (180)
.++|+..|+.|.+++.-..+.+.+.++= + .++.++.++||...
T Consensus 234 i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~------------- 300 (319)
T PLN02213 234 YRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE------------- 300 (319)
T ss_pred ceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-------------
Confidence 6899999999999999888888777640 1 23455668889763
Q ss_pred hHHHHHHHHHHHHHHHH
Q 030264 159 DEMEGLAVQAIAAFISK 175 (180)
Q Consensus 159 ~~~~~~~~~~i~~fl~~ 175 (180)
..|+.+...+..|+..
T Consensus 301 -~qP~~al~m~~~fi~~ 316 (319)
T PLN02213 301 -YRPNETFIMFQRWISG 316 (319)
T ss_pred -cCHHHHHHHHHHHHcC
Confidence 2368888888888864
No 231
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=90.62 E-value=1.5 Score=34.42 Aligned_cols=81 Identities=17% Similarity=0.086 Sum_probs=51.6
Q ss_pred ccCCceEEEEEeccCCCCCC---CCCCCchHHH-------HHHHHHHHHHHHhhC---CCCcEEEEeeChhHHHHHHHhh
Q 030264 4 KALDAVEVVTFDYPYIAGGK---RKAPPKAEKL-------VEFHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVAC 70 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~---~~~~~~~~~~-------~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~ 70 (180)
.+++||+++.=|---.+... .......+.+ +.....+-+.+.+.+ ..+.-...|.|-||.-++..|.
T Consensus 55 ~~~~G~A~~~TD~Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQ 134 (474)
T PF07519_consen 55 ALARGYATASTDSGHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQ 134 (474)
T ss_pred hhhcCeEEEEecCCCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHH
Confidence 46789999998864322111 0111222222 223333344454443 2347899999999999999999
Q ss_pred ccccccceEEEecc
Q 030264 71 KEDIAASAVLCLGY 84 (180)
Q Consensus 71 ~~~~~~~~~~~~~~ 84 (180)
++|..+++|+.-++
T Consensus 135 ryP~dfDGIlAgaP 148 (474)
T PF07519_consen 135 RYPEDFDGILAGAP 148 (474)
T ss_pred hChhhcCeEEeCCc
Confidence 99999999998553
No 232
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=90.43 E-value=1.4 Score=35.22 Aligned_cols=64 Identities=20% Similarity=0.228 Sum_probs=39.1
Q ss_pred CCceEEEEEeccC--CC---CCCCCCCCchHHHHHHHHHHHHHHHhh---CC--CCcEEEEeeChhHHHHHHHhhc
Q 030264 6 LDAVEVVTFDYPY--IA---GGKRKAPPKAEKLVEFHTDVVKGAVAK---FP--GHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 6 ~~g~~v~~~d~~g--~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
.+...|+.++||- .+ -|.... ......-|...+++|++.. ++ .++|.++|||.||..+..+...
T Consensus 142 ~~~VVvVt~~YRLG~lGF~st~d~~~--~gN~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~S 215 (545)
T KOG1516|consen 142 LKDVVVVTINYRLGPLGFLSTGDSAA--PGNLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLS 215 (545)
T ss_pred cCCEEEEEecccceeceeeecCCCCC--CCcccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcC
Confidence 3467888888884 11 111111 1112234566666666653 33 3489999999999998776654
No 233
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.22 E-value=2.1 Score=33.68 Aligned_cols=40 Identities=28% Similarity=0.352 Sum_probs=30.3
Q ss_pred CCCCcEEEEeeChhHHHHHHHhhc-----cccccceEEEeccCCC
Q 030264 48 FPGHPLILAGKSMGSRVSCMVACK-----EDIAASAVLCLGYPLK 87 (180)
Q Consensus 48 ~~~~~i~l~G~S~Gg~~a~~~a~~-----~~~~~~~~~~~~~~~~ 87 (180)
.+..||.++|+|.|+.+-...+.. .-..|..+++++.|..
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~ 488 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVP 488 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCcc
Confidence 456699999999999998755543 2245778888888765
No 234
>PLN02209 serine carboxypeptidase
Probab=88.98 E-value=1.8 Score=33.62 Aligned_cols=60 Identities=18% Similarity=0.219 Sum_probs=44.7
Q ss_pred CCcEEEEeecCCCCCChHHHHHHHHHcc-----------------------CC-cEEEEEcCCCCccccccccccccccc
Q 030264 102 TVPIMFVQGSKDGLCPLDKLEAVRKKMK-----------------------SL-SELHLIDGGDHSFKIGKKHLQTMGTT 157 (180)
Q Consensus 102 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~-~~~~~~~~~~H~~~~~~~~~~~~~~~ 157 (180)
..++|+..|+.|-+++.-..+.+.+.++ ++ .++..+.++||.. .
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmV-p----------- 418 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTA-E----------- 418 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCc-C-----------
Confidence 3589999999999999988888877653 01 2345567788976 3
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 030264 158 QDEMEGLAVQAIAAFISK 175 (180)
Q Consensus 158 ~~~~~~~~~~~i~~fl~~ 175 (180)
..|+.+...+.+|+..
T Consensus 419 --~qP~~al~m~~~fi~~ 434 (437)
T PLN02209 419 --YLPEESSIMFQRWISG 434 (437)
T ss_pred --cCHHHHHHHHHHHHcC
Confidence 3368888888888853
No 235
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=88.95 E-value=2.3 Score=31.54 Aligned_cols=62 Identities=13% Similarity=0.172 Sum_probs=37.0
Q ss_pred EEEEEecc---CCCCCCCCCC-CchHHHHHHHHHHHHHHHhhC---CCCcEEEEeeChhHHHHHHHhhc
Q 030264 10 EVVTFDYP---YIAGGKRKAP-PKAEKLVEFHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 10 ~v~~~d~~---g~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
+++-+|.| |+|.+..... .......+++...++..-+.+ ...+++|.|-|.||..+..+|..
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~ 71 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQE 71 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHH
Confidence 57889998 4432221111 111122245555555444433 34589999999999988888865
No 236
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=88.84 E-value=1.2 Score=34.60 Aligned_cols=60 Identities=17% Similarity=0.233 Sum_probs=45.4
Q ss_pred CcEEEEeecCCCCCChHHHHHHHHHccC--------------C----------cEEEEEcCCCCccccccccccccccch
Q 030264 103 VPIMFVQGSKDGLCPLDKLEAVRKKMKS--------------L----------SELHLIDGGDHSFKIGKKHLQTMGTTQ 158 (180)
Q Consensus 103 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~--------------~----------~~~~~~~~~~H~~~~~~~~~~~~~~~~ 158 (180)
.++++..|+.|-.+|.-..+.+.+.+.- + ..+..+.|+||....++
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~---------- 433 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDK---------- 433 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCC----------
Confidence 6899999999999999888777655421 0 22356779999887743
Q ss_pred hHHHHHHHHHHHHHHHH
Q 030264 159 DEMEGLAVQAIAAFISK 175 (180)
Q Consensus 159 ~~~~~~~~~~i~~fl~~ 175 (180)
++.....+..|+..
T Consensus 434 ---p~~al~m~~~fl~g 447 (454)
T KOG1282|consen 434 ---PESALIMFQRFLNG 447 (454)
T ss_pred ---cHHHHHHHHHHHcC
Confidence 57788888899865
No 237
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=87.70 E-value=2.5 Score=32.84 Aligned_cols=60 Identities=15% Similarity=0.143 Sum_probs=44.9
Q ss_pred CCcEEEEeecCCCCCChHHHHHHHHHccC-----------------------C-cEEEEEcCCCCccccccccccccccc
Q 030264 102 TVPIMFVQGSKDGLCPLDKLEAVRKKMKS-----------------------L-SELHLIDGGDHSFKIGKKHLQTMGTT 157 (180)
Q Consensus 102 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-----------------------~-~~~~~~~~~~H~~~~~~~~~~~~~~~ 157 (180)
..++|+..|+.|.+++.-..+.+.+.++= + .++.++.++||...
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp------------ 414 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE------------ 414 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC------------
Confidence 36899999999999999888888876530 1 23456678899873
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 030264 158 QDEMEGLAVQAIAAFISK 175 (180)
Q Consensus 158 ~~~~~~~~~~~i~~fl~~ 175 (180)
..|+.+...+..|+..
T Consensus 415 --~qP~~al~m~~~Fi~~ 430 (433)
T PLN03016 415 --YRPNETFIMFQRWISG 430 (433)
T ss_pred --CCHHHHHHHHHHHHcC
Confidence 2368888888888854
No 238
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=86.92 E-value=1.2 Score=34.89 Aligned_cols=110 Identities=25% Similarity=0.211 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHHHHHHhh---CCC--CcEEEEeeChhHHHHHHHhhccc---cccceEEEeccCCCCCCcccchhhhccC
Q 030264 30 AEKLVEFHTDVVKGAVAK---FPG--HPLILAGKSMGSRVSCMVACKED---IAASAVLCLGYPLKGMNGAVRDELLLQI 101 (180)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~---~~~--~~i~l~G~S~Gg~~a~~~a~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (180)
+....+|+..+.+.+... +.. .+.+|+|-|.||.-+..+|..-- ...++++.++..+.+- +....+....+
T Consensus 172 ~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvlign-g~~t~Pl~~~~ 250 (498)
T COG2939 172 FEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGN-GLWTDPLTQYL 250 (498)
T ss_pred hhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecC-CcccChhHHHH
Confidence 333445555555544432 222 38999999999999998887622 2456666655333211 11222222222
Q ss_pred CC-cEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCC
Q 030264 102 TV-PIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGG 140 (180)
Q Consensus 102 ~~-P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (180)
.- |+..-.+..|...+.+..++..+...........+++
T Consensus 251 ~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~ 290 (498)
T COG2939 251 TYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGC 290 (498)
T ss_pred HhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCC
Confidence 22 3334466777777776666665543322333334444
No 239
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=86.21 E-value=1.9 Score=34.67 Aligned_cols=42 Identities=19% Similarity=0.279 Sum_probs=30.3
Q ss_pred CCcEEEEeecCCCCCChHHHHHHHHHcc-------CCcEEEEEcCCCCc
Q 030264 102 TVPIMFVQGSKDGLCPLDKLEAVRKKMK-------SLSELHLIDGGDHS 143 (180)
Q Consensus 102 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~H~ 143 (180)
..|.+++||..|.++|....-+-+-.+. +...++.+.++.|+
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHf 603 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHF 603 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeec
Confidence 5799999999999999865544332322 22677888888887
No 240
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=85.27 E-value=1.7 Score=34.93 Aligned_cols=59 Identities=20% Similarity=0.251 Sum_probs=41.1
Q ss_pred CceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhh-----CCCCcEEEEeeChhHHHHHHHhhc
Q 030264 7 DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK-----FPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
-|.-++.+||--. +...+....+.+--++-|++.+ ...++|++.|-|.||.+.+..+.+
T Consensus 426 L~cPiiSVdYSLA------PEaPFPRaleEv~fAYcW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr 489 (880)
T KOG4388|consen 426 LGCPIISVDYSLA------PEAPFPRALEEVFFAYCWAINNCALLGSTGERIVLAGDSAGGNLCFTVALR 489 (880)
T ss_pred hCCCeEEeeeccC------CCCCCCcHHHHHHHHHHHHhcCHHHhCcccceEEEeccCCCcceeehhHHH
Confidence 3566777777653 3344444556666677777663 345699999999999988777765
No 241
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=82.82 E-value=2.9 Score=32.47 Aligned_cols=62 Identities=13% Similarity=0.171 Sum_probs=35.1
Q ss_pred ceEEEEEecc-CCCCCCCCCC-----CchHHHHHHHHHHHHHHHhhC---CCCcEEEEeeChhHHHHHHHhhc
Q 030264 8 AVEVVTFDYP-YIAGGKRKAP-----PKAEKLVEFHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 8 g~~v~~~d~~-g~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
-..++-+|.| |. |-|... .......+++...+......+ ...++.|.|.|.||..+..+|..
T Consensus 115 ~anllfiDqPvGt--GfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~ 185 (433)
T PLN03016 115 MANIIFLDQPVGS--GFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQE 185 (433)
T ss_pred cCcEEEecCCCCC--CccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHH
Confidence 3578888977 33 222211 111111234444444333333 34589999999999988877765
No 242
>PLN02209 serine carboxypeptidase
Probab=82.49 E-value=3.2 Score=32.32 Aligned_cols=64 Identities=14% Similarity=0.216 Sum_probs=35.8
Q ss_pred ceEEEEEecc-CC--CCCCCC-CCCchHHHHHHHHHHHHHHHhhCC---CCcEEEEeeChhHHHHHHHhhc
Q 030264 8 AVEVVTFDYP-YI--AGGKRK-APPKAEKLVEFHTDVVKGAVAKFP---GHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 8 g~~v~~~d~~-g~--~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
-..++-+|.| |. |.+... .....+...+++...++..-..++ ..++.|.|.|.||..+..+|..
T Consensus 117 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~ 187 (437)
T PLN02209 117 TANIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHE 187 (437)
T ss_pred cCcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHH
Confidence 3578888977 33 211111 111111223444444444433333 4589999999999988877754
No 243
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=82.24 E-value=3.6 Score=29.89 Aligned_cols=38 Identities=21% Similarity=0.192 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHhhC-CCCcEEEEeeChhHHHHHHHhhc
Q 030264 34 VEFHTDVVKGAVAKF-PGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 34 ~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
.+.+...+.++...+ +.++|.++|+|-|+..|-.++..
T Consensus 74 ~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 74 EARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 456666677776654 45589999999999999988865
No 244
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=80.72 E-value=9.8 Score=28.41 Aligned_cols=65 Identities=18% Similarity=0.182 Sum_probs=43.3
Q ss_pred CceEEEEEeccCCCCC-C-------------CCCCCchHHHHHHHHHHHHHHHhhC-CCCcEEEEeeChhHHHHHHHhhc
Q 030264 7 DAVEVVTFDYPYIAGG-K-------------RKAPPKAEKLVEFHTDVVKGAVAKF-PGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g-~-------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
++.+++++--+|.+.+ . +....-...+.+-+..++.++...+ ++++|.++|+|-|++++--+|..
T Consensus 63 d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 63 DGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred CCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 6778888877876421 1 0011112223456677777777765 46799999999999999888866
No 245
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=77.72 E-value=7.4 Score=29.02 Aligned_cols=62 Identities=18% Similarity=0.322 Sum_probs=43.5
Q ss_pred EEEEEecc-C--CC--CCCCCCCCchHHHHHHHHHHHHHHHh---hCCCCcEEEEeeChhHHHHHHHhhc
Q 030264 10 EVVTFDYP-Y--IA--GGKRKAPPKAEKLVEFHTDVVKGAVA---KFPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 10 ~v~~~d~~-g--~~--~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
.++-+|-| | ++ +|++.......+...|+..+++.+-. ++...|++|+.-|.||-++..++..
T Consensus 73 dllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~ 142 (414)
T KOG1283|consen 73 DLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALE 142 (414)
T ss_pred cEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhh
Confidence 45566665 3 22 46655566666666777777766544 3455699999999999999998876
No 246
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=74.58 E-value=9.2 Score=26.81 Aligned_cols=35 Identities=17% Similarity=0.082 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHhh------CCCCcEEEEeeChhHHHHHHHhh
Q 030264 35 EFHTDVVKGAVAK------FPGHPLILAGKSMGSRVSCMVAC 70 (180)
Q Consensus 35 ~~~~~~~~~~~~~------~~~~~i~l~G~S~Gg~~a~~~a~ 70 (180)
..++++++|+... +..+++.++|.| ||..+.+...
T Consensus 107 g~LKNaiDwls~~~~~~~~~~~KpvaivgaS-gg~~g~ra~~ 147 (219)
T TIGR02690 107 GSQKDQIDWIPLSVGPVRPTQGKTLAVMQVS-GGSQSFNAVN 147 (219)
T ss_pred HHHHHHHHhcccCcccccccCCCcEEEEEeC-CcHhHHHHHH
Confidence 3566778887653 456789999998 5544444433
No 247
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=73.01 E-value=26 Score=25.67 Aligned_cols=36 Identities=22% Similarity=0.172 Sum_probs=26.5
Q ss_pred cEEEEeeChhHHHHHHHhhc---cccccceEEEeccCCC
Q 030264 52 PLILAGKSMGSRVSCMVACK---EDIAASAVLCLGYPLK 87 (180)
Q Consensus 52 ~i~l~G~S~Gg~~a~~~a~~---~~~~~~~~~~~~~~~~ 87 (180)
++++.|.|+|+.-+-..-.. ....+++.+..++|..
T Consensus 110 kL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 110 KLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFF 148 (289)
T ss_pred eEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCC
Confidence 79999999998766554433 3356889999887643
No 248
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=72.75 E-value=38 Score=25.49 Aligned_cols=97 Identities=15% Similarity=0.213 Sum_probs=62.8
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCC--CcEEEEeeChhHHHHHHHhhcc--ccccceEE
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPG--HPLILAGKSMGSRVSCMVACKE--DIAASAVL 80 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~--~~~~~~~~ 80 (180)
-++||.|+.+|-.|+ ..+-.++++.+..+..-+....+. ..+.++--+.-|.-++.-|... ...+.++|
T Consensus 218 kar~~DvvliDTAGR-------Lhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~eav~l~GiI 290 (340)
T COG0552 218 KARGIDVVLIDTAGR-------LHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFNEAVGLDGII 290 (340)
T ss_pred HHcCCCEEEEeCccc-------ccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHHHhcCCceEE
Confidence 468999999999995 233445667777766666554432 2577787899999998888773 34678888
Q ss_pred EeccCCCC-CCcccchhhhccCCCcEEEEee
Q 030264 81 CLGYPLKG-MNGAVRDELLLQITVPIMFVQG 110 (180)
Q Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~~~P~l~i~g 110 (180)
+-- +.+ ..+..-......+..|++++.=
T Consensus 291 lTK--lDgtAKGG~il~I~~~l~~PI~fiGv 319 (340)
T COG0552 291 LTK--LDGTAKGGIILSIAYELGIPIKFIGV 319 (340)
T ss_pred EEe--cccCCCcceeeeHHHHhCCCEEEEeC
Confidence 722 211 1111222345567889988853
No 249
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=71.73 E-value=11 Score=25.05 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=24.5
Q ss_pred EeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccc
Q 030264 108 VQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFK 145 (180)
Q Consensus 108 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~ 145 (180)
+.|..|.+.|+.+-.++.+. .+.+..+.| +|...
T Consensus 170 ~v~skDkIFpp~nq~ayw~~---rc~v~ei~g-~H~~F 203 (214)
T COG2830 170 YVGSKDKIFPPANQHAYWNA---RCAVIEING-EHYLF 203 (214)
T ss_pred hccCCCcccCCcchhhhhcc---ceeEEEecC-cceEE
Confidence 56889999999877666532 378888865 78743
No 250
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=69.51 E-value=17 Score=32.57 Aligned_cols=45 Identities=22% Similarity=0.303 Sum_probs=31.9
Q ss_pred HHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc--cccccceEEEec
Q 030264 39 DVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK--EDIAASAVLCLG 83 (180)
Q Consensus 39 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~~~~~~~~~~~ 83 (180)
-.+++++.-.+..|+-++|+|+|+.++...|.. .......+|++.
T Consensus 2170 ~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillD 2216 (2376)
T KOG1202|consen 2170 YYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLD 2216 (2376)
T ss_pred HHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEec
Confidence 334555555677799999999999999988866 223444566654
No 251
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=69.28 E-value=12 Score=29.07 Aligned_cols=42 Identities=21% Similarity=0.301 Sum_probs=25.3
Q ss_pred CcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCcccccc
Q 030264 103 VPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGK 148 (180)
Q Consensus 103 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~ 148 (180)
..+++..|+.||..... ..+.........++||+.|+..+..
T Consensus 377 tnviFtNG~~DPW~~lg----v~~~~~~~~~~~~I~g~~Hc~Dl~~ 418 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALG----VTSDSSDSVPAIVIPGGAHCSDLYP 418 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S-SSSSEEEEEETT--TTGGGS-
T ss_pred CeEEeeCCCCCCccccc----CCCCCCCCcccEEECCCeeeccccC
Confidence 57999999999997654 2222333456678999999977643
No 252
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=69.25 E-value=10 Score=25.19 Aligned_cols=33 Identities=27% Similarity=0.297 Sum_probs=23.5
Q ss_pred HHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcc
Q 030264 39 DVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE 72 (180)
Q Consensus 39 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 72 (180)
.+++.+.++ ....-.+.|.|+|+.++..++...
T Consensus 15 Gvl~aL~e~-gi~~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 15 GVAKALRER-GPLIDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCC
Confidence 334444443 233568999999999999999873
No 253
>PRK10279 hypothetical protein; Provisional
Probab=68.72 E-value=8.8 Score=28.31 Aligned_cols=32 Identities=31% Similarity=0.322 Sum_probs=23.4
Q ss_pred HHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc
Q 030264 39 DVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 39 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
-+++.+.+. ....-.+.|.|+|+.++..+|..
T Consensus 22 GVL~aL~E~-gi~~d~i~GtS~GAlvga~yA~g 53 (300)
T PRK10279 22 GVINALKKV-GIEIDIVAGCSIGSLVGAAYACD 53 (300)
T ss_pred HHHHHHHHc-CCCcCEEEEEcHHHHHHHHHHcC
Confidence 344555443 33467899999999999999975
No 254
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=68.07 E-value=11 Score=21.60 Aligned_cols=62 Identities=13% Similarity=0.097 Sum_probs=37.2
Q ss_pred CCcEEEEeecCCCCCChHHHHHHHHHccCC-cEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHH
Q 030264 102 TVPIMFVQGSKDGLCPLDKLEAVRKKMKSL-SELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFI 173 (180)
Q Consensus 102 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl 173 (180)
+.=++++||-.+..-.+ ..+.+.+..+ ..+..++--||+.... .....+..+.+.+.+..|+
T Consensus 16 k~~v~i~HG~~eh~~ry---~~~a~~L~~~G~~V~~~D~rGhG~S~g-------~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 16 KAVVVIVHGFGEHSGRY---AHLAEFLAEQGYAVFAYDHRGHGRSEG-------KRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CEEEEEeCCcHHHHHHH---HHHHHHHHhCCCEEEEECCCcCCCCCC-------cccccCCHHHHHHHHHHHh
Confidence 34477788887655433 3344444433 8888898889997752 2223344566666666665
No 255
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=67.50 E-value=10 Score=25.56 Aligned_cols=32 Identities=19% Similarity=0.135 Sum_probs=22.7
Q ss_pred HHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc
Q 030264 39 DVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 39 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
.+++.+.+. ....=.+.|.|.|+.++..++..
T Consensus 16 Gvl~~L~e~-~~~~d~i~GtSaGai~aa~~a~g 47 (194)
T cd07207 16 GALKALEEA-GILKKRVAGTSAGAITAALLALG 47 (194)
T ss_pred HHHHHHHHc-CCCcceEEEECHHHHHHHHHHcC
Confidence 344444443 23346899999999999999976
No 256
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=67.50 E-value=17 Score=24.38 Aligned_cols=54 Identities=15% Similarity=0.268 Sum_probs=38.0
Q ss_pred ccCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhH
Q 030264 4 KALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGS 62 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg 62 (180)
+.+.|+..+.+|.-..- .+.........+.+.++.++..+..++|.++.-|.|.
T Consensus 36 Lk~~Gik~li~DkDNTL-----~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs 89 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTL-----TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGS 89 (168)
T ss_pred hhhcCceEEEEcCCCCC-----CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCc
Confidence 34679999999998742 1112223335677778888887777789999999863
No 257
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=66.71 E-value=5.2 Score=29.62 Aligned_cols=18 Identities=22% Similarity=0.283 Sum_probs=16.5
Q ss_pred EEEeeChhHHHHHHHhhc
Q 030264 54 ILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 54 ~l~G~S~Gg~~a~~~a~~ 71 (180)
.+.|.|+||.+|..++..
T Consensus 35 ~i~GTStGgiIA~~la~g 52 (312)
T cd07212 35 WIAGTSTGGILALALLHG 52 (312)
T ss_pred EEEeeChHHHHHHHHHcC
Confidence 689999999999999975
No 258
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=65.72 E-value=11 Score=27.88 Aligned_cols=31 Identities=19% Similarity=0.224 Sum_probs=22.4
Q ss_pred HHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc
Q 030264 40 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 40 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
+++.+.++ +...=.++|.|+|+.++..+++.
T Consensus 33 vL~aLee~-gi~~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 33 VIKALEEA-GIPVDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcC
Confidence 34444443 33355789999999999999976
No 259
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=65.72 E-value=14 Score=25.79 Aligned_cols=21 Identities=29% Similarity=0.458 Sum_probs=18.1
Q ss_pred CcEEEEeeChhHHHHHHHhhc
Q 030264 51 HPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 51 ~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
..-.+.|.|+|+.++..++..
T Consensus 28 ~~~~i~GtSaGAi~aa~~a~g 48 (221)
T cd07210 28 EPSAISGTSAGALVGGLFASG 48 (221)
T ss_pred CceEEEEeCHHHHHHHHHHcC
Confidence 345799999999999999975
No 260
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=63.17 E-value=61 Score=24.17 Aligned_cols=65 Identities=15% Similarity=0.145 Sum_probs=42.5
Q ss_pred CcEEEEeecCCCCCChHHHHHHHHHc---cCC-cEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHhh
Q 030264 103 VPIMFVQGSKDGLCPLDKLEAVRKKM---KSL-SELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSL 177 (180)
Q Consensus 103 ~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 177 (180)
+-.+-+-|++|.+.-.-..+...+.+ +.. .+...-|+.||.-..... --.++....+.+|+.++-
T Consensus 340 ~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGs----------rfr~eIvPri~dFI~~~d 408 (415)
T COG4553 340 VALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGS----------RFREEIVPRIRDFIRRYD 408 (415)
T ss_pred eeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccc----------hHHHHHHHHHHHHHHHhC
Confidence 45778899999887665555544443 322 556777899998322111 234678889999998763
No 261
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=63.11 E-value=27 Score=20.04 Aligned_cols=44 Identities=9% Similarity=0.043 Sum_probs=31.6
Q ss_pred chHHHHHHHHHHHHHHHhhC---CCCcEEEEeeChhHHHHHHHhhcc
Q 030264 29 KAEKLVEFHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVACKE 72 (180)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~ 72 (180)
.+..+...+.+.+++++..- ..+++-++|-|.|=.+|.+.+...
T Consensus 15 HP~GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 15 HPVGCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp -HHHHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 35566788888888888742 235899999999988888777664
No 262
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=62.72 E-value=9.6 Score=29.62 Aligned_cols=35 Identities=29% Similarity=0.381 Sum_probs=23.7
Q ss_pred HHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccc
Q 030264 40 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIA 75 (180)
Q Consensus 40 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~ 75 (180)
+++.+.++ +..+=.+.|.|+|+.+|..++...+++
T Consensus 91 VLkaL~E~-gl~p~vIsGTSaGAivAal~as~~~ee 125 (421)
T cd07230 91 VLKALFEA-NLLPRIISGSSAGSIVAAILCTHTDEE 125 (421)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCHHH
Confidence 34444443 222347999999999999999874433
No 263
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=62.63 E-value=16 Score=24.31 Aligned_cols=32 Identities=25% Similarity=0.298 Sum_probs=22.6
Q ss_pred HHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcc
Q 030264 40 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE 72 (180)
Q Consensus 40 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 72 (180)
+++.+.++ ....=.+.|.|.|+.++..++...
T Consensus 18 vl~~L~e~-g~~~d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 18 VLRALEEE-GIEIDIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred HHHHHHHC-CCCeeEEEEeCHHHHHHHHHHcCC
Confidence 34444443 233568999999999999998873
No 264
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=62.24 E-value=18 Score=26.30 Aligned_cols=23 Identities=30% Similarity=0.407 Sum_probs=18.3
Q ss_pred CCCCcEEEEeeChhHHHHHHHhh
Q 030264 48 FPGHPLILAGKSMGSRVSCMVAC 70 (180)
Q Consensus 48 ~~~~~i~l~G~S~Gg~~a~~~a~ 70 (180)
....+..++|||+|=..|+.++.
T Consensus 73 ~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 73 LLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred cCCCCcEEeecCHHHHHHHHHhC
Confidence 35568899999999988877664
No 265
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=61.35 E-value=19 Score=23.92 Aligned_cols=31 Identities=26% Similarity=0.215 Sum_probs=21.8
Q ss_pred HHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc
Q 030264 40 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 40 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
+++.+.+. ....=.+.|.|.|+.++..++..
T Consensus 18 vl~~L~~~-~~~~d~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 18 VLKALEEA-GIPIDIVSGTSAGAIVGALYAAG 48 (175)
T ss_pred HHHHHHHc-CCCeeEEEEECHHHHHHHHHHcC
Confidence 34444433 22345899999999999999976
No 266
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=61.23 E-value=40 Score=24.62 Aligned_cols=19 Identities=32% Similarity=0.331 Sum_probs=16.9
Q ss_pred EEEEeeChhHHHHHHHhhc
Q 030264 53 LILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 53 i~l~G~S~Gg~~a~~~a~~ 71 (180)
=.+.|.|.||.+++.++..
T Consensus 36 D~i~GTSaGaiia~~la~g 54 (288)
T cd07213 36 DLFAGTSAGSLIALGLALG 54 (288)
T ss_pred eEEEEeCHHHHHHHHHHcC
Confidence 3789999999999999875
No 267
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=60.92 E-value=16 Score=26.51 Aligned_cols=32 Identities=19% Similarity=0.149 Sum_probs=22.7
Q ss_pred HHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc
Q 030264 39 DVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 39 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
.+++.+.+. ....=.+.|.|+|+.++..+|..
T Consensus 27 GVL~aLeE~-gi~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 27 GILQALEEA-GIPIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHHc-CCCccEEEEECHHHHHHHHHHcC
Confidence 344455443 33345789999999999999976
No 268
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=60.91 E-value=17 Score=25.27 Aligned_cols=33 Identities=24% Similarity=0.363 Sum_probs=23.7
Q ss_pred HHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccc
Q 030264 40 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED 73 (180)
Q Consensus 40 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~ 73 (180)
+++.+.+. ....-.+.|.|.|+.++..++...+
T Consensus 16 vl~aL~e~-g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEA-GIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCc
Confidence 34444443 2235589999999999999998853
No 269
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=60.16 E-value=11 Score=27.78 Aligned_cols=25 Identities=20% Similarity=0.274 Sum_probs=19.3
Q ss_pred hhCCCCcEEEEeeChhHHHHHHHhh
Q 030264 46 AKFPGHPLILAGKSMGSRVSCMVAC 70 (180)
Q Consensus 46 ~~~~~~~i~l~G~S~Gg~~a~~~a~ 70 (180)
...+..+-.++|||+|=..|+.++-
T Consensus 79 ~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 79 RSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHTTHCESEEEESTTHHHHHHHHTT
T ss_pred cccccccceeeccchhhHHHHHHCC
Confidence 3445668899999999888886654
No 270
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=59.94 E-value=89 Score=25.02 Aligned_cols=50 Identities=28% Similarity=0.374 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhh--CCCCcEEEEeeChhHHHHHHHhhccccccceEEEeccCCC
Q 030264 35 EFHTDVVKGAVAK--FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 87 (180)
Q Consensus 35 ~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~ 87 (180)
+.+.+.++..... +..+.+++.|-|||..=|+-+++... ..++++ +=|+.
T Consensus 339 ~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiV-gKPL~ 390 (511)
T TIGR03712 339 QGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIV-GKPLV 390 (511)
T ss_pred HHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEE-cCccc
Confidence 4455555555444 34458999999999999999999843 345554 33433
No 271
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=58.94 E-value=22 Score=24.02 Aligned_cols=37 Identities=16% Similarity=0.212 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHhh-CCCCcEEEEeeChhHHHHHHHhhc
Q 030264 35 EFHTDVVKGAVAK-FPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 35 ~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
..++.+++|+-.. +.++++.+++.|.|+.-+.....+
T Consensus 84 g~lKnaiD~l~~~~~~~Kpv~~~~~s~g~~~~~~a~~~ 121 (184)
T COG0431 84 GALKNAIDWLSREALGGKPVLLLGTSGGGAGGLRAQNQ 121 (184)
T ss_pred HHHHHHHHhCCHhHhCCCcEEEEecCCCchhHHHHHHH
Confidence 4566777777665 667788999999888777766655
No 272
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=58.57 E-value=22 Score=25.79 Aligned_cols=24 Identities=25% Similarity=0.362 Sum_probs=18.8
Q ss_pred hCCCCcEEEEeeChhHHHHHHHhh
Q 030264 47 KFPGHPLILAGKSMGSRVSCMVAC 70 (180)
Q Consensus 47 ~~~~~~i~l~G~S~Gg~~a~~~a~ 70 (180)
..+..+-.++|||+|-..|+.++.
T Consensus 78 ~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 78 SWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HcCCcccEEEecCHHHHHHHHHhC
Confidence 345568899999999988877664
No 273
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=58.51 E-value=61 Score=25.94 Aligned_cols=95 Identities=14% Similarity=0.111 Sum_probs=52.3
Q ss_pred CCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc---------ccccc
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK---------EDIAA 76 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~---------~~~~~ 76 (180)
.+||.|+.+|-.|+- .+ ...++.. +..+...-..+.|..+|--+=|.=++.-+.+ .|..+
T Consensus 464 ~~gfDVvLiDTAGR~------~~-~~~lm~~----l~k~~~~~~pd~i~~vgealvg~dsv~q~~~fn~al~~~~~~r~i 532 (587)
T KOG0781|consen 464 NQGFDVVLIDTAGRM------HN-NAPLMTS----LAKLIKVNKPDLILFVGEALVGNDSVDQLKKFNRALADHSTPRLI 532 (587)
T ss_pred hcCCCEEEEeccccc------cC-ChhHHHH----HHHHHhcCCCceEEEehhhhhCcHHHHHHHHHHHHHhcCCCcccc
Confidence 469999999999852 11 1122233 3333332334579999988888777655443 24467
Q ss_pred ceEEEeccCCCCCCcccc--hhhhccCCCcEEEEeecCC
Q 030264 77 SAVLCLGYPLKGMNGAVR--DELLLQITVPIMFVQGSKD 113 (180)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~l~i~g~~D 113 (180)
+++++.-+-.. .+... ....-....|++|+...+-
T Consensus 533 d~~~ltk~dtv--~d~vg~~~~m~y~~~~pi~fvg~gqt 569 (587)
T KOG0781|consen 533 DGILLTKFDTV--DDKVGAAVSMVYITGKPILFVGVGQT 569 (587)
T ss_pred ceEEEEeccch--hhHHHHHhhheeecCCceEEEecCcc
Confidence 88877332211 11110 1112234579998866543
No 274
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=58.31 E-value=8.7 Score=28.30 Aligned_cols=17 Identities=18% Similarity=0.395 Sum_probs=15.5
Q ss_pred EEEeeChhHHHHHHHhh
Q 030264 54 ILAGKSMGSRVSCMVAC 70 (180)
Q Consensus 54 ~l~G~S~Gg~~a~~~a~ 70 (180)
.+.|.|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 48999999999999986
No 275
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=57.87 E-value=13 Score=28.80 Aligned_cols=34 Identities=29% Similarity=0.432 Sum_probs=23.5
Q ss_pred HHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccc
Q 030264 39 DVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED 73 (180)
Q Consensus 39 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~ 73 (180)
.+++.+.+. +..+=.+.|.|.|+.++..++...+
T Consensus 84 GVlkaL~e~-gllp~iI~GtSAGAivaalla~~t~ 117 (407)
T cd07232 84 GVVKALLDA-DLLPNVISGTSGGSLVAALLCTRTD 117 (407)
T ss_pred HHHHHHHhC-CCCCCEEEEECHHHHHHHHHHcCCH
Confidence 334444443 2334569999999999999998643
No 276
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=57.86 E-value=11 Score=27.08 Aligned_cols=20 Identities=15% Similarity=0.137 Sum_probs=17.6
Q ss_pred EEEEeeChhHHHHHHHhhcc
Q 030264 53 LILAGKSMGSRVSCMVACKE 72 (180)
Q Consensus 53 i~l~G~S~Gg~~a~~~a~~~ 72 (180)
=.++|.|.|+.++..+++..
T Consensus 29 d~i~GtSaGAi~a~~~~~g~ 48 (266)
T cd07208 29 DLVIGVSAGALNAASYLSGQ 48 (266)
T ss_pred CEEEEECHHHHhHHHHHhCC
Confidence 37999999999999998873
No 277
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=54.61 E-value=13 Score=26.55 Aligned_cols=15 Identities=27% Similarity=0.426 Sum_probs=12.3
Q ss_pred CCCcEEEEeeChhHH
Q 030264 49 PGHPLILAGKSMGSR 63 (180)
Q Consensus 49 ~~~~i~l~G~S~Gg~ 63 (180)
....|.++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 345899999999975
No 278
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=54.38 E-value=12 Score=28.21 Aligned_cols=18 Identities=28% Similarity=0.458 Sum_probs=16.1
Q ss_pred EEEeeChhHHHHHHHhhc
Q 030264 54 ILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 54 ~l~G~S~Gg~~a~~~a~~ 71 (180)
.+.|.|.||.+|+.++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 689999999999999863
No 279
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=54.29 E-value=28 Score=25.16 Aligned_cols=22 Identities=27% Similarity=0.297 Sum_probs=17.8
Q ss_pred CCcEEEEeeChhHHHHHHHhhc
Q 030264 50 GHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 50 ~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
..+-.++|||+|=..|+.++..
T Consensus 82 i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred CCCCEEeecCHHHHHHHHHhCC
Confidence 5688999999999888776643
No 280
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=53.92 E-value=48 Score=20.06 Aligned_cols=43 Identities=21% Similarity=0.246 Sum_probs=30.5
Q ss_pred HHHHHHHhhCCCCcEEEEeeChhHH--HHHHHhhccccccceEEE
Q 030264 39 DVVKGAVAKFPGHPLILAGKSMGSR--VSCMVACKEDIAASAVLC 81 (180)
Q Consensus 39 ~~~~~~~~~~~~~~i~l~G~S~Gg~--~a~~~a~~~~~~~~~~~~ 81 (180)
..+..+.+.++..+++++|-|--.= +-..++.++|.+|.++.+
T Consensus 53 ~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 53 DNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred HHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 3456666778989999999986543 334555668888887754
No 281
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=53.80 E-value=23 Score=26.11 Aligned_cols=30 Identities=23% Similarity=0.186 Sum_probs=22.5
Q ss_pred HHHHHhhCCCCcEEEEeeChhHHHHHHHhhc
Q 030264 41 VKGAVAKFPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 41 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
++.+.+ .+...-.+.|.|+|+.++..+|..
T Consensus 30 l~aL~e-~gi~~~~iaGtS~GAiva~l~A~g 59 (306)
T COG1752 30 LKALEE-AGIPIDVIAGTSAGAIVAALYAAG 59 (306)
T ss_pred HHHHHH-cCCCccEEEecCHHHHHHHHHHcC
Confidence 334433 345577899999999999999985
No 282
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=53.54 E-value=26 Score=24.76 Aligned_cols=35 Identities=23% Similarity=0.160 Sum_probs=23.8
Q ss_pred HHHHHHHhh-CCCCcEEEEeeChhHHHHHHHhhccc
Q 030264 39 DVVKGAVAK-FPGHPLILAGKSMGSRVSCMVACKED 73 (180)
Q Consensus 39 ~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~ 73 (180)
-+++.+.++ +..+.-.+.|.|+|+.++..++...+
T Consensus 16 GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 16 GVLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 445555543 11123479999999999999998743
No 283
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=52.44 E-value=14 Score=24.34 Aligned_cols=20 Identities=20% Similarity=0.280 Sum_probs=16.7
Q ss_pred cEEEEeeChhHHHHHHHhhc
Q 030264 52 PLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 52 ~i~l~G~S~Gg~~a~~~a~~ 71 (180)
.-.+.|.|.||.+++.++..
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALG 47 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC
T ss_pred ccEEEEcChhhhhHHHHHhC
Confidence 45799999999999888776
No 284
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=52.20 E-value=11 Score=27.76 Aligned_cols=17 Identities=24% Similarity=0.524 Sum_probs=15.4
Q ss_pred EEEeeChhHHHHHHHhh
Q 030264 54 ILAGKSMGSRVSCMVAC 70 (180)
Q Consensus 54 ~l~G~S~Gg~~a~~~a~ 70 (180)
.+.|.|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 68999999999999874
No 285
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=51.89 E-value=20 Score=27.58 Aligned_cols=32 Identities=25% Similarity=0.407 Sum_probs=22.6
Q ss_pred HHHHHhhCCCCcEEEEeeChhHHHHHHHhhccc
Q 030264 41 VKGAVAKFPGHPLILAGKSMGSRVSCMVACKED 73 (180)
Q Consensus 41 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~ 73 (180)
++.+.+. +..+=++.|.|+|+.+|..+|...+
T Consensus 102 ~kaL~e~-gl~p~~i~GtS~Gaivaa~~a~~~~ 133 (391)
T cd07229 102 VKALWLR-GLLPRIITGTATGALIAALVGVHTD 133 (391)
T ss_pred HHHHHHc-CCCCceEEEecHHHHHHHHHHcCCH
Confidence 3444332 3335579999999999999998643
No 286
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=51.39 E-value=31 Score=24.65 Aligned_cols=18 Identities=28% Similarity=0.717 Sum_probs=16.3
Q ss_pred EEeeChhHHHHHHHhhcc
Q 030264 55 LAGKSMGSRVSCMVACKE 72 (180)
Q Consensus 55 l~G~S~Gg~~a~~~a~~~ 72 (180)
+.|.|+|+.++..++...
T Consensus 34 i~GtSAGAl~aa~~a~g~ 51 (245)
T cd07218 34 ISGASAGALAACCLLCDL 51 (245)
T ss_pred EEEEcHHHHHHHHHHhCC
Confidence 999999999999998763
No 287
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=50.43 E-value=13 Score=28.11 Aligned_cols=18 Identities=28% Similarity=0.613 Sum_probs=16.3
Q ss_pred EEEeeChhHHHHHHHhhc
Q 030264 54 ILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 54 ~l~G~S~Gg~~a~~~a~~ 71 (180)
.+.|.|.||.+|+.++..
T Consensus 46 liaGTStGgiiA~~la~~ 63 (349)
T cd07214 46 VIAGTSTGGLITAMLTAP 63 (349)
T ss_pred EEeeCCHHHHHHHHHhcC
Confidence 689999999999999974
No 288
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=50.32 E-value=22 Score=26.59 Aligned_cols=31 Identities=32% Similarity=0.495 Sum_probs=21.7
Q ss_pred HHHHHhhCCCCcEEEEeeChhHHHHHHHhhcc
Q 030264 41 VKGAVAKFPGHPLILAGKSMGSRVSCMVACKE 72 (180)
Q Consensus 41 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 72 (180)
++.+.+. +..+-.+.|.|.|+.++..++...
T Consensus 87 lkaL~e~-gl~p~~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 87 VRTLVEH-QLLPRVIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred HHHHHHc-CCCCCEEEEECHHHHHHHHHHcCC
Confidence 4444433 333456999999999999998763
No 289
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=50.20 E-value=31 Score=24.97 Aligned_cols=88 Identities=18% Similarity=0.213 Sum_probs=44.1
Q ss_pred EEEEeeChhHHHHHHHhhccccccceEEEeccC---CCCCC---c------------ccchhhhccCC-CcEEEEeecCC
Q 030264 53 LILAGKSMGSRVSCMVACKEDIAASAVLCLGYP---LKGMN---G------------AVRDELLLQIT-VPIMFVQGSKD 113 (180)
Q Consensus 53 i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~---~~~~~---~------------~~~~~~~~~~~-~P~l~i~g~~D 113 (180)
-.++|-+.|..++...+.. .-++-++.++.. ..+.. . .+..+.++.++ +|+++-.+..|
T Consensus 15 ~pIig~gaGtGlsAk~ae~--gGaDlI~~ynsGrfR~~G~~SlagllpygnaN~iv~em~~eiLp~v~~tPViaGv~atD 92 (268)
T PF09370_consen 15 KPIIGAGAGTGLSAKCAEK--GGADLILIYNSGRFRMAGRGSLAGLLPYGNANEIVMEMAREILPVVKDTPVIAGVCATD 92 (268)
T ss_dssp --EEEEEESSHHHHHHHHH--TT-SEEEE-HHHHHHHTT--GGGGGBTEEEHHHHHHHHHHHHGGG-SSS-EEEEE-TT-
T ss_pred CceEEEeeccchhhHHHHh--cCCCEEEEecchhHhhCCCcchhhhhcccCHhHHHHHHHHhhhhhccCCCEEEEecCcC
Confidence 4578888898899999988 345666664421 00110 0 01123445554 89999999999
Q ss_pred CCCChHHHHHHHHHccCCcEEEEEcCCCCc
Q 030264 114 GLCPLDKLEAVRKKMKSLSELHLIDGGDHS 143 (180)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 143 (180)
|+.+.+...+-.+.+. -.-+.-||..+..
T Consensus 93 P~~~~~~fl~~lk~~G-f~GV~NfPTvgli 121 (268)
T PF09370_consen 93 PFRDMDRFLDELKELG-FSGVQNFPTVGLI 121 (268)
T ss_dssp TT--HHHHHHHHHHHT--SEEEE-S-GGG-
T ss_pred CCCcHHHHHHHHHHhC-CceEEECCcceee
Confidence 9976555444333332 2667778865543
No 290
>PRK03482 phosphoglycerate mutase; Provisional
Probab=49.63 E-value=84 Score=21.65 Aligned_cols=39 Identities=15% Similarity=0.334 Sum_probs=23.2
Q ss_pred chHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHh
Q 030264 29 KAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVA 69 (180)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 69 (180)
...++..-+...++.+......+++.+++| |+.+.+.++
T Consensus 121 s~~~~~~Rv~~~l~~~~~~~~~~~vliVsH--g~~i~~l~~ 159 (215)
T PRK03482 121 SMQELSDRMHAALESCLELPQGSRPLLVSH--GIALGCLVS 159 (215)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCeEEEEeC--cHHHHHHHH
Confidence 344445555666666655445557999988 455544444
No 291
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=49.40 E-value=16 Score=28.34 Aligned_cols=65 Identities=18% Similarity=0.159 Sum_probs=32.7
Q ss_pred CCCcEEEEeecCCCCCChHHHHHHHHHc-cCCcEEE--EEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHh
Q 030264 101 ITVPIMFVQGSKDGLCPLDKLEAVRKKM-KSLSELH--LIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKS 176 (180)
Q Consensus 101 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 176 (180)
-..|+++++|.-|.+-+ +....+.+.+ +...-+. -.||.|+..... . . +..+..+..+++||...
T Consensus 188 ~p~P~VIv~gGlDs~qe-D~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~--------l-~-~D~~~l~~aVLd~L~~~ 255 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQE-DLYRLFRDYLAPRGIAMLTVDMPGQGESPKWP--------L-T-QDSSRLHQAVLDYLASR 255 (411)
T ss_dssp S-EEEEEEE--TTS-GG-GGHHHHHCCCHHCT-EEEEE--TTSGGGTTT---------S---S-CCHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCcchhHH-HHHHHHHHHHHhCCCEEEEEccCCCcccccCC--------C-C-cCHHHHHHHHHHHHhcC
Confidence 45799999999998753 3333333333 2334443 467777653211 0 0 22356788899998764
No 292
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=49.37 E-value=38 Score=25.12 Aligned_cols=34 Identities=3% Similarity=-0.167 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc
Q 030264 34 VEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
++.+.++++++++. .+-++|-|||..+++.+..-
T Consensus 121 W~El~~i~~w~~~~----~~s~LgICwGaQa~a~algG 154 (302)
T PRK05368 121 WDELKEILDWAKTH----VTSTLFICWAAQAALYHLYG 154 (302)
T ss_pred HHHHHHHHHHHHHc----CCCEEEEcHHHHHHHHHcCC
Confidence 56688888888875 35689999999998877754
No 293
>PF10561 UPF0565: Uncharacterised protein family UPF0565; InterPro: IPR018881 This family of proteins has no known function.
Probab=49.19 E-value=14 Score=27.25 Aligned_cols=20 Identities=35% Similarity=0.381 Sum_probs=18.2
Q ss_pred cEEEEeeChhHHHHHHHhhc
Q 030264 52 PLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 52 ~i~l~G~S~Gg~~a~~~a~~ 71 (180)
++.|+|+|-||.+.-.+...
T Consensus 194 ~~~LiGFSKGcvVLNqll~E 213 (303)
T PF10561_consen 194 PLTLIGFSKGCVVLNQLLYE 213 (303)
T ss_pred ceEEEEecCcchHHHHHHHH
Confidence 89999999999998888876
No 294
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=48.82 E-value=27 Score=25.82 Aligned_cols=20 Identities=25% Similarity=0.602 Sum_probs=17.4
Q ss_pred cEEEEeeChhHHHHHHHhhc
Q 030264 52 PLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 52 ~i~l~G~S~Gg~~a~~~a~~ 71 (180)
+=.+.|.|.|+.++..++..
T Consensus 98 ~~~i~GtSaGAi~aa~~~~~ 117 (298)
T cd07206 98 PRVISGSSAGAIVAALLGTH 117 (298)
T ss_pred CCEEEEEcHHHHHHHHHHcC
Confidence 44699999999999999975
No 295
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=48.11 E-value=70 Score=25.32 Aligned_cols=24 Identities=17% Similarity=0.283 Sum_probs=20.1
Q ss_pred CCCCcEEEEeeChhHHHHHHHhhc
Q 030264 48 FPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 48 ~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
+...++.|.|-|.+|.....+|..
T Consensus 165 y~~~~fyI~GESYAG~YVP~La~~ 188 (454)
T KOG1282|consen 165 YKSNDFYIAGESYAGHYVPALAQE 188 (454)
T ss_pred hcCCCeEEecccccceehHHHHHH
Confidence 345689999999999888888865
No 296
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=48.06 E-value=16 Score=26.15 Aligned_cols=18 Identities=28% Similarity=0.403 Sum_probs=16.3
Q ss_pred EEEeeChhHHHHHHHhhc
Q 030264 54 ILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 54 ~l~G~S~Gg~~a~~~a~~ 71 (180)
.+.|.|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 589999999999999876
No 297
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=48.03 E-value=17 Score=28.96 Aligned_cols=17 Identities=24% Similarity=0.413 Sum_probs=15.4
Q ss_pred EEeeChhHHHHHHHhhc
Q 030264 55 LAGKSMGSRVSCMVACK 71 (180)
Q Consensus 55 l~G~S~Gg~~a~~~a~~ 71 (180)
+.|.|.||++|..+...
T Consensus 454 ICGvSTG~ilA~~Lg~k 470 (763)
T KOG4231|consen 454 ICGVSTGGILAIALGVK 470 (763)
T ss_pred HhccCchHHHHHHHHhc
Confidence 78999999999998876
No 298
>PLN02578 hydrolase
Probab=47.57 E-value=1.2e+02 Score=22.80 Aligned_cols=65 Identities=9% Similarity=0.059 Sum_probs=37.1
Q ss_pred CCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHhh
Q 030264 102 TVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKSL 177 (180)
Q Consensus 102 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 177 (180)
..|++++||-.... .........+....+++.++-.||+..... ...+ ..+...+.+.+|++...
T Consensus 86 g~~vvliHG~~~~~---~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~-----~~~~---~~~~~a~~l~~~i~~~~ 150 (354)
T PLN02578 86 GLPIVLIHGFGASA---FHWRYNIPELAKKYKVYALDLLGFGWSDKA-----LIEY---DAMVWRDQVADFVKEVV 150 (354)
T ss_pred CCeEEEECCCCCCH---HHHHHHHHHHhcCCEEEEECCCCCCCCCCc-----cccc---CHHHHHHHHHHHHHHhc
Confidence 46899999976642 333333444444577888877788865321 1111 12344566777776543
No 299
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=47.52 E-value=60 Score=25.91 Aligned_cols=70 Identities=16% Similarity=0.198 Sum_probs=39.2
Q ss_pred CCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHHHh
Q 030264 102 TVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFISKS 176 (180)
Q Consensus 102 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 176 (180)
.+.|++.+|..||.-. .-............++.|+.|+..+.+.+ .............+.+.+..||...
T Consensus 433 atnVvf~NG~~DPWh~----LG~~~st~~~~~~~li~gtsHCaDMyp~~-~sD~~~L~~aR~~i~~~l~~wl~~~ 502 (514)
T KOG2182|consen 433 ATNVVFPNGSLDPWHA----LGLQNSTDSSVVSILINGTSHCADMYPAR-DSDSPSLKAARNRIDQNLARWLHQQ 502 (514)
T ss_pred cceEEecCCCCCchhh----hccccCCCCCceEEEecCCccccccCCCC-CCccHHHHHHHHHHHHHHHHHhhhc
Confidence 5689999999998732 22222222337788899999997664311 1111222233344445555565543
No 300
>COG3621 Patatin [General function prediction only]
Probab=46.95 E-value=1e+02 Score=23.39 Aligned_cols=55 Identities=13% Similarity=0.145 Sum_probs=33.1
Q ss_pred ceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCC-cEEEEeeChhHHHHHHHhhcc
Q 030264 8 AVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGH-PLILAGKSMGSRVSCMVACKE 72 (180)
Q Consensus 8 g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~ 72 (180)
-|+.+.+|=-|.- | .+.......++++...--.+ -=.+.|.|.||.+++.+++-.
T Consensus 8 k~rIlsldGGGvr-G---------~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~k 63 (394)
T COG3621 8 KYRILSLDGGGVR-G---------AILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGK 63 (394)
T ss_pred ceeEEEecCCccc-c---------HHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCC
Confidence 4677777654421 1 34455555566544321111 234689999999999999763
No 301
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=46.45 E-value=34 Score=25.46 Aligned_cols=28 Identities=21% Similarity=0.145 Sum_probs=20.6
Q ss_pred HHHhhC-CCCcEEEEeeChhHHHHHHHhh
Q 030264 43 GAVAKF-PGHPLILAGKSMGSRVSCMVAC 70 (180)
Q Consensus 43 ~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~ 70 (180)
.+.+.. ..++.++.|||+|=+-|+.++.
T Consensus 76 ~l~~~~~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 76 VLAEQGLGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHHhcCCCCCceeecccHhHHHHHHHcc
Confidence 334433 4668899999999888887765
No 302
>PRK07877 hypothetical protein; Provisional
Probab=46.38 E-value=1.7e+02 Score=24.95 Aligned_cols=79 Identities=9% Similarity=0.054 Sum_probs=44.3
Q ss_pred hCCCCcEEEEeeChhHHHHHHHhhccccccceEEEeccCCCCCCcccchhhhccCCCcEEEEeecCCCCCCh-HHHHHHH
Q 030264 47 KFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQGSKDGLCPL-DKLEAVR 125 (180)
Q Consensus 47 ~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-~~~~~~~ 125 (180)
.+...+|.|+|-+.|+.++..++..- -+..+.++.+-.. ...+++. . ++...|--.+. +.+.+..
T Consensus 104 ~L~~~~V~IvG~GlGs~~a~~LaraG--vvG~l~lvD~D~v---------e~sNLnR-q--~~~~~diG~~Kv~~a~~~l 169 (722)
T PRK07877 104 RLGRLRIGVVGLSVGHAIAHTLAAEG--LCGELRLADFDTL---------ELSNLNR-V--PAGVFDLGVNKAVVAARRI 169 (722)
T ss_pred HHhcCCEEEEEecHHHHHHHHHHHcc--CCCeEEEEcCCEE---------ccccccc-c--cCChhhcccHHHHHHHHHH
Confidence 34556899999999888888777662 1356666553211 2344444 2 34555532222 2333344
Q ss_pred HHccCCcEEEEEcC
Q 030264 126 KKMKSLSELHLIDG 139 (180)
Q Consensus 126 ~~~~~~~~~~~~~~ 139 (180)
+.+++.+++..++.
T Consensus 170 ~~inp~i~v~~~~~ 183 (722)
T PRK07877 170 AELDPYLPVEVFTD 183 (722)
T ss_pred HHHCCCCEEEEEec
Confidence 44555577776654
No 303
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=46.34 E-value=16 Score=27.26 Aligned_cols=17 Identities=35% Similarity=0.915 Sum_probs=14.7
Q ss_pred EEEeeChhHHHHHHHhh
Q 030264 54 ILAGKSMGSRVSCMVAC 70 (180)
Q Consensus 54 ~l~G~S~Gg~~a~~~a~ 70 (180)
.+.|.|.||.+|+.++.
T Consensus 43 li~GTStGgiia~~l~~ 59 (329)
T cd07215 43 LVAGTSTGGILTCLYLC 59 (329)
T ss_pred eeeccCHHHHHHHHHhC
Confidence 68999999999998753
No 304
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=46.12 E-value=31 Score=27.90 Aligned_cols=26 Identities=19% Similarity=0.105 Sum_probs=20.7
Q ss_pred hhCCCCcEEEEeeChhHHHHHHHhhc
Q 030264 46 AKFPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 46 ~~~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
+.++.++-.++|||+|=+.++.++--
T Consensus 260 ~~~GI~Pdav~GHSlGE~aAa~aAGv 285 (538)
T TIGR02816 260 DEFAIKPDFALGYSKGEASMWASLGV 285 (538)
T ss_pred HhcCCCCCEEeecCHHHHHHHHHhCC
Confidence 45667788999999998888877754
No 305
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=45.94 E-value=1.5e+02 Score=24.54 Aligned_cols=40 Identities=8% Similarity=0.205 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEee------ChhHHHHHHHhhccccc
Q 030264 34 VEFHTDVVKGAVAKFPGHPLILAGK------SMGSRVSCMVACKEDIA 75 (180)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~i~l~G~------S~Gg~~a~~~a~~~~~~ 75 (180)
...+..++..+... .+++++||| |.|+.+++..-+..-.+
T Consensus 323 aRvis~al~d~i~e--~d~VfImGHk~pDmDalGsAig~~~~A~~~~~ 368 (655)
T COG3887 323 ARVISTALSDIIKE--SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK 368 (655)
T ss_pred HHHHHHHHHHHHhh--cCcEEEEccCCCChHHHHHHHHHHHHHHhccc
Confidence 56666667666655 458999999 78999998776664333
No 306
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=45.92 E-value=87 Score=20.75 Aligned_cols=33 Identities=9% Similarity=-0.070 Sum_probs=18.3
Q ss_pred CCCcEEEEeeChhHHHHHHHhhccccccceEEE
Q 030264 49 PGHPLILAGKSMGSRVSCMVACKEDIAASAVLC 81 (180)
Q Consensus 49 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~ 81 (180)
..++|+++|-|..|..-+.++-..+..+..++=
T Consensus 67 ~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD 99 (160)
T PF08484_consen 67 EGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVD 99 (160)
T ss_dssp TT--EEEE---SHHHHHHHHHT--TTTS--EEE
T ss_pred cCCEEEEECcchHHHHHHHHhCCCcceeEEEEe
Confidence 345899999999999888887765555666654
No 307
>COG3675 Predicted lipase [Lipid metabolism]
Probab=44.73 E-value=20 Score=26.32 Aligned_cols=34 Identities=15% Similarity=0.296 Sum_probs=26.1
Q ss_pred HHHHHHHHHhhCCC-CcEEEEeeChhHHHHHHHhh
Q 030264 37 HTDVVKGAVAKFPG-HPLILAGKSMGSRVSCMVAC 70 (180)
Q Consensus 37 ~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~ 70 (180)
..+..+++.++.+. -.++++|||-|+.+....+.
T Consensus 160 ~~~q~~~lleeiP~~Yrig~tghS~g~aii~vrGt 194 (332)
T COG3675 160 IEKQEQTLLEEIPQGYRIGITGHSSGGAIICVRGT 194 (332)
T ss_pred HHHHHHHHHHhcccceEEEEEeecCCccEEEEecc
Confidence 33466777777776 47899999999998877666
No 308
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=44.45 E-value=44 Score=24.78 Aligned_cols=37 Identities=11% Similarity=0.293 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEeeC--hhHHHHHHHhhc
Q 030264 35 EFHTDVVKGAVAKFPGHPLILAGKS--MGSRVSCMVACK 71 (180)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~l~G~S--~Gg~~a~~~a~~ 71 (180)
..+..++++..-.+.+++++++|.| ||--++.++..+
T Consensus 144 ~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 144 SGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 3444555554445667799999997 999999988865
No 309
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=43.72 E-value=2.7e+02 Score=25.83 Aligned_cols=39 Identities=18% Similarity=0.236 Sum_probs=26.4
Q ss_pred EeecCCCC---CChHHHHHHHHHccCC-cEEEEEcCCCCcccc
Q 030264 108 VQGSKDGL---CPLDKLEAVRKKMKSL-SELHLIDGGDHSFKI 146 (180)
Q Consensus 108 i~g~~D~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~ 146 (180)
.|...|.. -|.+.+..+.+++... +-.+.+..+|-.|+.
T Consensus 651 CHNs~D~~TiSGp~a~v~~~v~qL~~~gvFak~V~t~G~aFHS 693 (2376)
T KOG1202|consen 651 CHNSKDNVTISGPQASVFAFVEQLRAEGVFAKEVRTGGYAFHS 693 (2376)
T ss_pred ccCCCCceEecCChHHHHHHHHHhhhcCeeeeEecCCCccccC
Confidence 45556654 3667888888888755 455566667777775
No 310
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=43.37 E-value=17 Score=24.50 Aligned_cols=35 Identities=9% Similarity=-0.125 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc
Q 030264 33 LVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
..+.+.++++|.+.+. .-.+|-|||+.+++.+..-
T Consensus 83 Yw~El~~i~dwa~~~v----~stl~iCWgaqaal~~~yG 117 (175)
T cd03131 83 YWEELTEILDWAKTHV----TSTLFSCWAAMAALYYFYG 117 (175)
T ss_pred hHHHHHHHHHHHHHhC----cchHHHHHHHHHHHHHHcC
Confidence 3567888899988663 4588999999999988865
No 311
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=42.95 E-value=25 Score=24.98 Aligned_cols=19 Identities=37% Similarity=0.581 Sum_probs=17.3
Q ss_pred EEEeeChhHHHHHHHhhcc
Q 030264 54 ILAGKSMGSRVSCMVACKE 72 (180)
Q Consensus 54 ~l~G~S~Gg~~a~~~a~~~ 72 (180)
.+.|.|+|+.++..++...
T Consensus 34 ~i~GtSAGAl~aa~~a~g~ 52 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGV 52 (243)
T ss_pred EEEEEcHHHHHHHHHHhCC
Confidence 7999999999999999874
No 312
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=42.21 E-value=13 Score=28.49 Aligned_cols=22 Identities=18% Similarity=0.194 Sum_probs=17.3
Q ss_pred CCcEEEEeeChhHHHHHHHhhc
Q 030264 50 GHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 50 ~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
..+|-++|||+||.++..+...
T Consensus 149 i~kISfvghSLGGLvar~AIgy 170 (405)
T KOG4372|consen 149 IEKISFVGHSLGGLVARYAIGY 170 (405)
T ss_pred cceeeeeeeecCCeeeeEEEEe
Confidence 4589999999999887655544
No 313
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=41.91 E-value=1.3e+02 Score=21.47 Aligned_cols=42 Identities=12% Similarity=0.088 Sum_probs=28.6
Q ss_pred CCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCcccc
Q 030264 102 TVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKI 146 (180)
Q Consensus 102 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 146 (180)
..|++++||-.+.. .....+.+.+.+..+++.++--||+...
T Consensus 25 ~~plvllHG~~~~~---~~w~~~~~~L~~~~~vi~~Dl~G~G~S~ 66 (276)
T TIGR02240 25 LTPLLIFNGIGANL---ELVFPFIEALDPDLEVIAFDVPGVGGSS 66 (276)
T ss_pred CCcEEEEeCCCcch---HHHHHHHHHhccCceEEEECCCCCCCCC
Confidence 35899999965443 3444555666656788888777888653
No 314
>PRK13936 phosphoheptose isomerase; Provisional
Probab=41.35 E-value=1.1e+02 Score=20.84 Aligned_cols=23 Identities=4% Similarity=0.057 Sum_probs=18.9
Q ss_pred CCCcEEEEeeChhHHHHHHHhhc
Q 030264 49 PGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 49 ~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
..++|.++|.+-.+.+|..++.+
T Consensus 42 ~a~~I~i~G~G~S~~~A~~~~~~ 64 (197)
T PRK13936 42 NEGKILACGNGGSAADAQHFSAE 64 (197)
T ss_pred CCCEEEEEeCcHhHHHHHHHHHH
Confidence 45689999999888888888765
No 315
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=41.22 E-value=80 Score=25.40 Aligned_cols=58 Identities=24% Similarity=0.331 Sum_probs=30.2
Q ss_pred CCceEEEEEeccC--CC----CCCCCCCCchHHHHHHHHHHHHHHHh---hCCC--CcEEEEeeChhHHHH
Q 030264 6 LDAVEVVTFDYPY--IA----GGKRKAPPKAEKLVEFHTDVVKGAVA---KFPG--HPLILAGKSMGSRVS 65 (180)
Q Consensus 6 ~~g~~v~~~d~~g--~~----~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~i~l~G~S~Gg~~a 65 (180)
.....|+.++||- ++ .+.+..+... .+ -|-.-+++|+++ .+++ ++|.++|.|.|+.-.
T Consensus 164 ~envIvVs~NYRvG~FGFL~l~~~~eaPGNm-Gl-~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv 232 (601)
T KOG4389|consen 164 VENVIVVSMNYRVGAFGFLYLPGHPEAPGNM-GL-LDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASV 232 (601)
T ss_pred eccEEEEEeeeeeccceEEecCCCCCCCCcc-ch-HHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhh
Confidence 3456677777763 11 1222222221 12 222233455554 3443 489999999998543
No 316
>PRK13938 phosphoheptose isomerase; Provisional
Probab=40.77 E-value=1.2e+02 Score=20.88 Aligned_cols=38 Identities=13% Similarity=0.105 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhh-CCCCcEEEEeeChhHHHHHHHhhcc
Q 030264 35 EFHTDVVKGAVAK-FPGHPLILAGKSMGSRVSCMVACKE 72 (180)
Q Consensus 35 ~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~ 72 (180)
+.+.+..+.+.+. ....+|+++|.+-.|.++..++.+.
T Consensus 29 ~~~~~~a~~~~~~l~~g~rI~i~G~G~S~~~A~~fa~~L 67 (196)
T PRK13938 29 EAARAIGDRLIAGYRAGARVFMCGNGGSAADAQHFAAEL 67 (196)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHc
Confidence 3344444444332 3456999999999999999999763
No 317
>KOG4530 consensus Predicted flavoprotein [General function prediction only]
Probab=40.58 E-value=58 Score=21.69 Aligned_cols=28 Identities=14% Similarity=0.271 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEeeChhHHH
Q 030264 35 EFHTDVVKGAVAKFPGHPLILAGKSMGSRV 64 (180)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~ 64 (180)
..+..+++++-.++.+++..++ |.||+=
T Consensus 103 A~LKNAlD~lyheW~gKPaliv--SyGGhG 130 (199)
T KOG4530|consen 103 APLKNALDWLYHEWAGKPALIV--SYGGHG 130 (199)
T ss_pred hHHHHHHHHhhhhhcCCceEEE--EecCCC
Confidence 3456677777777777776665 555533
No 318
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=38.73 E-value=1.2e+02 Score=20.16 Aligned_cols=38 Identities=18% Similarity=0.187 Sum_probs=22.7
Q ss_pred cEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCC
Q 030264 104 PIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDH 142 (180)
Q Consensus 104 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 142 (180)
-++++...-|.-.+...++++.+.+. +.++.+|-..|.
T Consensus 41 D~i~lG~w~d~G~~d~~~~~fl~~l~-~KkV~lF~T~G~ 78 (160)
T PF12641_consen 41 DLIFLGFWIDKGTPDKDMKEFLKKLK-GKKVALFGTAGA 78 (160)
T ss_pred CEEEEEcCccCCCCCHHHHHHHHHcc-CCeEEEEEecCC
Confidence 46666666666666666666666665 355555544433
No 319
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=38.48 E-value=1.3e+02 Score=20.69 Aligned_cols=37 Identities=11% Similarity=0.169 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhh-CCCCcEEEEeeChhHHHHHHHhhc
Q 030264 35 EFHTDVVKGAVAK-FPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 35 ~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
+.+.++++.+.+. ....+|.++|-.-.+.+|..++.+
T Consensus 25 ~~i~~a~~~l~~~l~~~~rI~~~G~GgSa~~A~~~a~~ 62 (196)
T PRK10886 25 DAISRAAMTLVQSLLNGNKILCCGNGTSAANAQHFAAS 62 (196)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECcHHHHHHHHHHHH
Confidence 4445555555443 345699999999999999988875
No 320
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=38.23 E-value=15 Score=29.10 Aligned_cols=29 Identities=28% Similarity=0.509 Sum_probs=23.4
Q ss_pred cEEEEeeChhHHHHHHHhhccccccceEE
Q 030264 52 PLILAGKSMGSRVSCMVACKEDIAASAVL 80 (180)
Q Consensus 52 ~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~ 80 (180)
|=++.|.|+||.+|..++.+..+.+..++
T Consensus 203 P~IIsGsS~GaivAsl~~v~~~eEl~~Ll 231 (543)
T KOG2214|consen 203 PNIISGSSAGAIVASLVGVRSNEELKQLL 231 (543)
T ss_pred chhhcCCchhHHHHHHHhhcchHHHHHHh
Confidence 56899999999999999988655555554
No 321
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=38.22 E-value=64 Score=23.17 Aligned_cols=20 Identities=15% Similarity=0.099 Sum_probs=17.4
Q ss_pred EEEEeeChhHHHHHHHhhcc
Q 030264 53 LILAGKSMGSRVSCMVACKE 72 (180)
Q Consensus 53 i~l~G~S~Gg~~a~~~a~~~ 72 (180)
-.+.|.|.|+.++..+++..
T Consensus 34 ~~i~GtSAGAl~aa~~asg~ 53 (252)
T cd07221 34 RMFFGASAGALHCVTFLSGL 53 (252)
T ss_pred CEEEEEcHHHHHHHHHHhCC
Confidence 36999999999999998763
No 322
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=37.93 E-value=33 Score=24.43 Aligned_cols=17 Identities=35% Similarity=0.452 Sum_probs=15.7
Q ss_pred EEEeeChhHHHHHHHhh
Q 030264 54 ILAGKSMGSRVSCMVAC 70 (180)
Q Consensus 54 ~l~G~S~Gg~~a~~~a~ 70 (180)
.+.|.|+|+.++..++.
T Consensus 34 ~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 34 RFAGASAGSLVAAVLLT 50 (246)
T ss_pred EEEEECHHHHHHHHHhc
Confidence 79999999999999984
No 323
>PRK10673 acyl-CoA esterase; Provisional
Probab=37.58 E-value=1.4e+02 Score=20.70 Aligned_cols=42 Identities=21% Similarity=0.391 Sum_probs=27.1
Q ss_pred CCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCcccc
Q 030264 102 TVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKI 146 (180)
Q Consensus 102 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 146 (180)
..|++++||-.+.. .....+...+....+++.++--||+...
T Consensus 16 ~~~iv~lhG~~~~~---~~~~~~~~~l~~~~~vi~~D~~G~G~s~ 57 (255)
T PRK10673 16 NSPIVLVHGLFGSL---DNLGVLARDLVNDHDIIQVDMRNHGLSP 57 (255)
T ss_pred CCCEEEECCCCCch---hHHHHHHHHHhhCCeEEEECCCCCCCCC
Confidence 46899999976543 3334455555545777777767777443
No 324
>KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis]
Probab=37.32 E-value=9.8 Score=28.63 Aligned_cols=38 Identities=21% Similarity=0.217 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhh--CCCCcEEEEeeChhHHHHHHHhhc
Q 030264 34 VEFHTDVVKGAVAK--FPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 34 ~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
..-+..+++.+..+ ...++..+.|-|.||..++.-+-.
T Consensus 157 ~rIw~av~~eLl~kGms~Ak~alLsGcSAGGLa~iLhCD~ 196 (402)
T KOG4287|consen 157 ARIWLAVMDELLAKGMSNAKQALLSGCSAGGLASILHCDE 196 (402)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHhhcCCccchhheeehHH
Confidence 34566667776654 233478899999999888765544
No 325
>PRK05665 amidotransferase; Provisional
Probab=36.72 E-value=95 Score=22.13 Aligned_cols=17 Identities=18% Similarity=0.292 Sum_probs=13.7
Q ss_pred EEEEeeChhHHHHHHHh
Q 030264 53 LILAGKSMGSRVSCMVA 69 (180)
Q Consensus 53 i~l~G~S~Gg~~a~~~a 69 (180)
+-++|.|+|..+...++
T Consensus 92 ~PilGIC~GhQlla~Al 108 (240)
T PRK05665 92 DKLLGVCFGHQLLALLL 108 (240)
T ss_pred CCEEEEeHHHHHHHHHh
Confidence 45999999998876666
No 326
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=36.60 E-value=41 Score=16.86 Aligned_cols=15 Identities=13% Similarity=-0.135 Sum_probs=12.8
Q ss_pred cCCceEEEEEeccCC
Q 030264 5 ALDAVEVVTFDYPYI 19 (180)
Q Consensus 5 a~~g~~v~~~d~~g~ 19 (180)
...+|.+..+|+||.
T Consensus 10 ~~~~y~~~~pdlpg~ 24 (48)
T PF03681_consen 10 EDGGYVAYFPDLPGC 24 (48)
T ss_dssp TSSSEEEEETTCCTC
T ss_pred CCCeEEEEeCCccCh
Confidence 456899999999995
No 327
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=36.51 E-value=31 Score=29.02 Aligned_cols=19 Identities=21% Similarity=0.330 Sum_probs=16.6
Q ss_pred cEEEEeeChhHHHHHHHhh
Q 030264 52 PLILAGKSMGSRVSCMVAC 70 (180)
Q Consensus 52 ~i~l~G~S~Gg~~a~~~a~ 70 (180)
-=.+.|.|+||.++..+|.
T Consensus 67 ~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 67 VDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CceEEeeCHHHHHHHHHHc
Confidence 3478999999999999987
No 328
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=35.94 E-value=1.1e+02 Score=20.21 Aligned_cols=54 Identities=17% Similarity=0.028 Sum_probs=31.4
Q ss_pred cccCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHH
Q 030264 3 GKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMV 68 (180)
Q Consensus 3 ~~a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~ 68 (180)
+...+|-.|+++|.+|-. ..+ +.+.+.++.+.... .+=.+++|-|-|=.=++..
T Consensus 62 ~~i~~~~~vi~Ld~~Gk~----~sS-------e~fA~~l~~~~~~G-~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 62 AAIPKGSYVVLLDIRGKA----LSS-------EEFADFLERLRDDG-RDISFLIGGADGLSEAVKA 115 (155)
T ss_pred HhcCCCCeEEEEecCCCc----CCh-------HHHHHHHHHHHhcC-CeEEEEEeCcccCCHHHHH
Confidence 445567789999999841 111 34445555554432 3357788888884444433
No 329
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=35.84 E-value=1.1e+02 Score=22.48 Aligned_cols=43 Identities=14% Similarity=0.178 Sum_probs=33.4
Q ss_pred CCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHh
Q 030264 27 PPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVA 69 (180)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 69 (180)
....+++.+.....+..+.+.++.+++.|++|..+=.++....
T Consensus 171 ~es~e~~~~R~~~~~k~i~~k~~~~~lLIV~H~~sv~~~~~~l 213 (272)
T KOG3734|consen 171 GESLEDCNDRIQKVFKAIADKYPNENLLIVAHGSSVDTCSAQL 213 (272)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCceEEEeccchHHHHHHHh
Confidence 3556677788888889999999998899999987755555444
No 330
>cd08770 DAP_dppA_3 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=35.66 E-value=1.2e+02 Score=22.06 Aligned_cols=35 Identities=14% Similarity=0.161 Sum_probs=21.8
Q ss_pred hccCCCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcC
Q 030264 98 LLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDG 139 (180)
Q Consensus 98 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (180)
.....+|++++.|++- ...+..+.++ .++.+.++.
T Consensus 143 Ag~~gVPV~lvsGD~~------~~~ea~~~~P-~~~tv~vK~ 177 (263)
T cd08770 143 AAYLGVPVVFVSGDAG------LCAEAKELNP-NIVTVPVKE 177 (263)
T ss_pred HhhcCCCEEEEecCHH------HHHHHHHhCC-CceEEEeee
Confidence 4557899999998752 2233333344 577777764
No 331
>COG0813 DeoD Purine-nucleoside phosphorylase [Nucleotide transport and metabolism]
Probab=35.52 E-value=68 Score=22.66 Aligned_cols=36 Identities=17% Similarity=0.409 Sum_probs=22.4
Q ss_pred CCCCcEEEEeeChhHHHHHHHhhc--cccccceEEEec
Q 030264 48 FPGHPLILAGKSMGSRVSCMVACK--EDIAASAVLCLG 83 (180)
Q Consensus 48 ~~~~~i~l~G~S~Gg~~a~~~a~~--~~~~~~~~~~~~ 83 (180)
+.+++|.++||.||---...++.. ..-.++.++-++
T Consensus 53 YKGk~iSvmg~GmGipS~sIY~~ELi~~y~Vk~iIRvG 90 (236)
T COG0813 53 YKGKKISVMGHGMGIPSISIYSRELITDYGVKKIIRVG 90 (236)
T ss_pred ecCcEEEEEEecCCCccHHHHHHHHHHHhCcceEEEEE
Confidence 566799999999995444444333 123456666555
No 332
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=35.42 E-value=1.3e+02 Score=19.90 Aligned_cols=34 Identities=15% Similarity=0.177 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc
Q 030264 35 EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
+++.++++.+.. .++|.++|....+.++..+..+
T Consensus 18 ~~~~~~~~~l~~---a~~I~i~G~G~S~~~A~~~~~~ 51 (179)
T TIGR03127 18 EELDKLADKIIK---AKRIFVAGAGRSGLVGKAFAMR 51 (179)
T ss_pred HHHHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHH
Confidence 345555555533 3589999998888777766665
No 333
>COG0794 GutQ Predicted sugar phosphate isomerase involved in capsule formation [Cell envelope biogenesis, outer membrane]
Probab=35.30 E-value=1.5e+02 Score=20.58 Aligned_cols=76 Identities=9% Similarity=0.068 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccc-cccceEEEeccCC---------CCCCcc-------------
Q 030264 36 FHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED-IAASAVLCLGYPL---------KGMNGA------------- 92 (180)
Q Consensus 36 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~-~~~~~~~~~~~~~---------~~~~~~------------- 92 (180)
++.+..+.+.. +..+|+++|-.-.|.++-.+|.+.. .-..+.++ + |. ....+.
T Consensus 27 ~~~~a~~~i~~--~~gkv~V~G~GkSG~Igkk~Aa~L~s~G~~a~fv-~-p~ea~hgdlg~i~~~DvviaiS~SGeT~el 102 (202)
T COG0794 27 DFVRAVELILE--CKGKVFVTGVGKSGLIGKKFAARLASTGTPAFFV-G-PAEALHGDLGMITPGDVVIAISGSGETKEL 102 (202)
T ss_pred HHHHHHHHHHh--cCCcEEEEcCChhHHHHHHHHHHHHccCCceEEe-c-CchhccCCccCCCCCCEEEEEeCCCcHHHH
Confidence 34444443333 2458999999999999998887732 12223333 2 11 111110
Q ss_pred -cchhhhccCCCcEEEEeecCCCC
Q 030264 93 -VRDELLLQITVPIMFVQGSKDGL 115 (180)
Q Consensus 93 -~~~~~~~~~~~P~l~i~g~~D~~ 115 (180)
...+.+++...+++.+.+..|..
T Consensus 103 ~~~~~~aK~~g~~liaiT~~~~Ss 126 (202)
T COG0794 103 LNLAPKAKRLGAKLIAITSNPDSS 126 (202)
T ss_pred HHHHHHHHHcCCcEEEEeCCCCCh
Confidence 11245677888888888888753
No 334
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=35.06 E-value=42 Score=21.87 Aligned_cols=18 Identities=33% Similarity=0.337 Sum_probs=16.0
Q ss_pred cEEEEeeChhHHHHHHHh
Q 030264 52 PLILAGKSMGSRVSCMVA 69 (180)
Q Consensus 52 ~i~l~G~S~Gg~~a~~~a 69 (180)
.-.+.|.|.|+.++..++
T Consensus 29 ~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 29 VTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCEEEEEcHHHHHHHHHh
Confidence 457889999999999999
No 335
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=34.54 E-value=1.4e+02 Score=20.53 Aligned_cols=44 Identities=23% Similarity=0.187 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhhCCCCcEEEEeeCh----hHHHHHHHhhccc-cccceEE
Q 030264 36 FHTDVVKGAVAKFPGHPLILAGKSM----GSRVSCMVACKED-IAASAVL 80 (180)
Q Consensus 36 ~~~~~~~~~~~~~~~~~i~l~G~S~----Gg~~a~~~a~~~~-~~~~~~~ 80 (180)
.+.+.+..+..... -.++++|+|. |..++.++|.+.. ..+..++
T Consensus 95 ~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~ 143 (202)
T cd01714 95 ATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVS 143 (202)
T ss_pred HHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEE
Confidence 33344444433323 2689999998 8889999998832 3344443
No 336
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=34.32 E-value=37 Score=24.34 Aligned_cols=20 Identities=15% Similarity=0.132 Sum_probs=17.2
Q ss_pred EEEEeeChhHHHHHHHhhcc
Q 030264 53 LILAGKSMGSRVSCMVACKE 72 (180)
Q Consensus 53 i~l~G~S~Gg~~a~~~a~~~ 72 (180)
-.+.|.|+|+.++..+++..
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~ 57 (249)
T cd07220 38 RKIYGASAGALTATALVTGV 57 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCC
Confidence 45889999999999988764
No 337
>PF04446 Thg1: tRNAHis guanylyltransferase; InterPro: IPR007537 The Thg1 protein from Saccharomyces cerevisiae (Baker's yeast) is responsible for adding a GMP residue to the 5' end of tRNA His [].; PDB: 3OTE_A 3OTC_A 3OTD_A 3OTB_A.
Probab=34.05 E-value=1.3e+02 Score=19.36 Aligned_cols=54 Identities=19% Similarity=0.251 Sum_probs=31.9
Q ss_pred cCCceEEEEEeccCCC---CCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeC
Q 030264 5 ALDAVEVVTFDYPYIA---GGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKS 59 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S 59 (180)
...-+.|+.+|=+|++ .+.....+......+.+......+.+.++ +.+...|+|
T Consensus 17 ~p~~~ivvRiDG~~F~kft~~~~f~KP~D~r~~~~M~~aa~~l~~~~~-~~~~aY~~S 73 (135)
T PF04446_consen 17 LPNTPIVVRIDGRGFHKFTKRHGFEKPNDERFLKAMNEAAKALMEEFP-DIVLAYGQS 73 (135)
T ss_dssp -TTSEEEEEEEETTHHHHHHHTT--SS--HHHHHHHHHHHHHHHHHSS-SEEEEEEET
T ss_pred CCCCeEEEEEeCcchhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEcC
Confidence 4556889999988864 12122233444556677777777777766 356666665
No 338
>COG3868 Uncharacterized conserved protein [Function unknown]
Probab=33.74 E-value=94 Score=23.04 Aligned_cols=62 Identities=11% Similarity=0.034 Sum_probs=43.4
Q ss_pred ccCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEE-eeChhHHHHHHHhhc
Q 030264 4 KALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILA-GKSMGSRVSCMVACK 71 (180)
Q Consensus 4 ~a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~-G~S~Gg~~a~~~a~~ 71 (180)
..++||.++++|--|.- .....+..+....++.++.+.+++...+-. |+=++..+.=.+...
T Consensus 98 L~akG~~g~~ldtlgS~------e~~apdA~~~~~~~~~~l~~~wp~e~lid~Rgf~~~~~l~~ll~~~ 160 (306)
T COG3868 98 LKAKGYKGLCLDTLGSL------ELFAPDAADAPKSLIRQLYANWPDESLIDNRGFEWLPYLPELLGKV 160 (306)
T ss_pred HHhcCeeEEEEeccchh------hhhchhhHhhHHHHHhhhhcCCCcceeeeccccccchhhHHHHHHH
Confidence 45789999999988841 111112223566777777788888877766 999999887776665
No 339
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=33.39 E-value=1.3e+02 Score=22.45 Aligned_cols=42 Identities=10% Similarity=-0.009 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHhhC----CCCcEEEEeeChhHHHHHHHhhccc
Q 030264 32 KLVEFHTDVVKGAVAKF----PGHPLILAGKSMGSRVSCMVACKED 73 (180)
Q Consensus 32 ~~~~~~~~~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~~~ 73 (180)
.|...+.+.+++.+... ..+++-++|-|.|=.++.+.++...
T Consensus 19 GCe~nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIsaaFG 64 (398)
T COG3007 19 GCEANVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAARISAAFG 64 (398)
T ss_pred cHHHHHHHHHHHHHhcCCccCCCceEEEEecCCcccHHHHHHHHhC
Confidence 34567777888887753 3458999999999989888887754
No 340
>PF08218 Citrate_ly_lig: Citrate lyase ligase C-terminal domain; InterPro: IPR013166 [Citrate (pro-3S)-lyase] ligase (6.2.1.22 from EC), also known as citrate lyase ligase, is responsible for acetylation of the prosthetic group (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase. It converts the inactive thiol form of the enzyme to the active form. In Clostridium sphenoides, citrate lyase ligase actively degrades citrate. In Clostridium sporosphaeroides and Lactococcus lactis, however, the enzyme is under stringent regulatory control. The enzyme's activity in anaerobic bacteria is modulated by phosphorylation and dephosphorylation []. The proteins in this entry represent the C-terminal domain of citrate lyase ligase.; GO: 0008771 [citrate (pro-3S)-lyase] ligase activity
Probab=33.25 E-value=1.5e+02 Score=20.27 Aligned_cols=69 Identities=14% Similarity=0.142 Sum_probs=41.5
Q ss_pred cceEEEeccCCCCCCcccchhhhccCCCcEEEEeecCCCCCChHHHHHHHHHccCC-cEEEEEcCCCCcc
Q 030264 76 ASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQGSKDGLCPLDKLEAVRKKMKSL-SELHLIDGGDHSF 144 (180)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~ 144 (180)
|.++++-+.|+...-..+-....++...=-+|+..++-...|.+...++.++--.+ ..+.+++++.-..
T Consensus 1 IgaIVMNaNPFT~GH~yLiE~Aa~~~d~l~vFVV~eD~S~Fpf~~R~~LVk~G~~~L~NV~V~~~g~YiI 70 (182)
T PF08218_consen 1 IGAIVMNANPFTLGHRYLIEQAAKECDWLHVFVVSEDRSLFPFADRYELVKEGTADLPNVTVHPGGDYII 70 (182)
T ss_pred CceEEEcCCCCccHHHHHHHHHHHhCCEEEEEEEccccCcCCHHHHHHHHHHHhCcCCCEEEEcCCCeee
Confidence 35667766777533222222334444444566777777889998888887764333 5677777654433
No 341
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=32.39 E-value=1.8e+02 Score=20.59 Aligned_cols=78 Identities=22% Similarity=0.411 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhhCC----CCcEEEEeeChhHHHHHHHhhc----cccccceEEEe---ccCCCC-CCcccchhhhccCC
Q 030264 35 EFHTDVVKGAVAKFP----GHPLILAGKSMGSRVSCMVACK----EDIAASAVLCL---GYPLKG-MNGAVRDELLLQIT 102 (180)
Q Consensus 35 ~~~~~~~~~~~~~~~----~~~i~l~G~S~Gg~~a~~~a~~----~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~ 102 (180)
+|+..+++.++...+ .+.+++|||..--.....++.. ....+.-+++. +||... .-+..+.+.++.+.
T Consensus 118 ~DYe~~v~aik~~~ppl~k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP~~d~vi~~l~~~~~~~v~ 197 (265)
T COG4822 118 NDYEICVEAIKDQIPPLNKDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYPLVDTVIEYLRKNGIKEVH 197 (265)
T ss_pred hhHHHHHHHHHHhcCCcCcCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCCcHHHHHHHHHHcCCceEE
Confidence 778888888887766 2368899986655544444433 12233333332 244220 01112233344443
Q ss_pred -CcEEEEeecC
Q 030264 103 -VPIMFVQGSK 112 (180)
Q Consensus 103 -~P~l~i~g~~ 112 (180)
.|.+++.|+.
T Consensus 198 L~PlMlvAG~H 208 (265)
T COG4822 198 LIPLMLVAGDH 208 (265)
T ss_pred EeeeEEeechh
Confidence 5999998864
No 342
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=32.34 E-value=1.2e+02 Score=18.51 Aligned_cols=23 Identities=17% Similarity=0.138 Sum_probs=18.8
Q ss_pred CCcEEEEeeChhHHHHHHHhhcc
Q 030264 50 GHPLILAGKSMGSRVSCMVACKE 72 (180)
Q Consensus 50 ~~~i~l~G~S~Gg~~a~~~a~~~ 72 (180)
.++|+++|......+|..++.+.
T Consensus 5 ~~~i~i~G~G~s~~~A~~~~~~l 27 (131)
T PF01380_consen 5 AKRIYIYGSGSSYGVAQYAALKL 27 (131)
T ss_dssp SSEEEEEESTHHHHHHHHHHHHH
T ss_pred CCEEEEEEcchHHHHHHHHHHHH
Confidence 45899999999988888887764
No 343
>PHA00490 terminal protein
Probab=32.22 E-value=69 Score=22.19 Aligned_cols=45 Identities=20% Similarity=0.203 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhccccccceE
Q 030264 34 VEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAV 79 (180)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~ 79 (180)
...+..+++.+...+...+++--|.|.| .+.-......|+.+.++
T Consensus 98 TKeaQrvvde~~~~~~Dke~isGGk~qG-Tvgqr~~llsp~~vtG~ 142 (266)
T PHA00490 98 TKEAQRVVDEILDRFNDKEVISGGKSQG-TVGQRKELLSPPDVTGF 142 (266)
T ss_pred cHHHHHHHHHHHHHhcCcceeeCCCCCC-cHhhhhhhcCCcccCCC
Confidence 4667788888888888889999999999 66666666655555543
No 344
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=30.98 E-value=78 Score=21.79 Aligned_cols=27 Identities=15% Similarity=0.335 Sum_probs=18.8
Q ss_pred HHHHHhhCCCCcEEEEeeChhHHHHHHH
Q 030264 41 VKGAVAKFPGHPLILAGKSMGSRVSCMV 68 (180)
Q Consensus 41 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~ 68 (180)
++.+.+.+. +...++|.|.|+.+....
T Consensus 104 ~~~i~~~~~-~G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 104 LDAILKRVA-RGVVIGGTSAGAAVMGET 130 (210)
T ss_pred HHHHHHHHH-cCCeEEEcCHHHHHhhhc
Confidence 334444433 357899999999988875
No 345
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=30.74 E-value=1.2e+02 Score=17.79 Aligned_cols=33 Identities=12% Similarity=0.104 Sum_probs=27.1
Q ss_pred HHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc
Q 030264 39 DVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 39 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
.+++.+++.++.+.|.+.|-+....+|..+...
T Consensus 31 ~~~~~l~~~LG~QdV~V~Gip~~sh~ArvLVeA 63 (84)
T PF07643_consen 31 AWVDGLRQALGPQDVTVYGIPADSHFARVLVEA 63 (84)
T ss_pred HHHHHHHHHhCCceeEEEccCCccHHHHHHHHh
Confidence 356667777787899999999999999887765
No 346
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=30.19 E-value=1.7e+02 Score=19.46 Aligned_cols=33 Identities=9% Similarity=0.136 Sum_probs=21.5
Q ss_pred HHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc
Q 030264 36 FHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 36 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
.+.++++.+.. .++|.++|....+.++..++.+
T Consensus 22 ~l~~~~~~i~~---a~~I~i~G~G~S~~~A~~~~~~ 54 (179)
T cd05005 22 ELDKLISAILN---AKRIFVYGAGRSGLVAKAFAMR 54 (179)
T ss_pred HHHHHHHHHHh---CCeEEEEecChhHHHHHHHHHH
Confidence 34444444433 2589999988777777766655
No 347
>PRK04148 hypothetical protein; Provisional
Probab=30.07 E-value=1.3e+02 Score=19.42 Aligned_cols=21 Identities=10% Similarity=0.052 Sum_probs=17.2
Q ss_pred CcEEEEeeChhHHHHHHHhhc
Q 030264 51 HPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 51 ~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
.++..+|-.+|..++..++..
T Consensus 18 ~kileIG~GfG~~vA~~L~~~ 38 (134)
T PRK04148 18 KKIVELGIGFYFKVAKKLKES 38 (134)
T ss_pred CEEEEEEecCCHHHHHHHHHC
Confidence 479999999998888877754
No 348
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=30.01 E-value=96 Score=21.53 Aligned_cols=34 Identities=9% Similarity=0.066 Sum_probs=20.0
Q ss_pred HHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHh
Q 030264 36 FHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVA 69 (180)
Q Consensus 36 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 69 (180)
...+.++...+..+.-..+++=||+||....-++
T Consensus 109 ~~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~~ 142 (216)
T PF00091_consen 109 EILEQIRKEIEKCDSLDGFFIVHSLGGGTGSGLG 142 (216)
T ss_dssp HHHHHHHHHHHTSTTESEEEEEEESSSSHHHHHH
T ss_pred ccccccchhhccccccccceecccccceeccccc
Confidence 3333344443333555788999999887554433
No 349
>PF04422 FrhB_FdhB_N: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; InterPro: IPR007516 Coenzyme F420 hydrogenase (1.12.99.1 from EC) reduces the low-potential two-electron acceptor coenzyme F420. This entry contains the N termini of F420 hydrogenase and dehydrogenase beta subunits [, ]. The N terminus of Methanobacterium formicicum formate dehydrogenase beta chain (1.2.1.2 from EC, P06130 from SWISSPROT) is also represented in this entry []. This region is often found in association with the 4Fe-4S binding domain, fer4 (IPR001450 from INTERPRO), and the C terminus IPR007525 from INTERPRO.
Probab=29.88 E-value=64 Score=18.54 Aligned_cols=29 Identities=21% Similarity=0.272 Sum_probs=20.4
Q ss_pred EEeeChhHHHHHHHhhc-cccccceEEEec
Q 030264 55 LAGKSMGSRVSCMVACK-EDIAASAVLCLG 83 (180)
Q Consensus 55 l~G~S~Gg~~a~~~a~~-~~~~~~~~~~~~ 83 (180)
...-|.||.++..+... ....|+++++..
T Consensus 14 r~~~~sGG~vTaLl~~lLe~g~Vd~vv~~~ 43 (82)
T PF04422_consen 14 REKSQSGGVVTALLAYLLESGLVDGVVVVG 43 (82)
T ss_pred cccCCcHHHHHHHHHHHHHcCCceEEEEEe
Confidence 34567788877776655 446788888866
No 350
>PF05003 DUF668: Protein of unknown function (DUF668); InterPro: IPR007700 This is a family of uncharacterised plant proteins of unknown function.
Probab=29.74 E-value=1.3e+02 Score=17.89 Aligned_cols=52 Identities=12% Similarity=0.069 Sum_probs=30.7
Q ss_pred CCCCCChHHHHHHHHHccCC------cEEEEEcCCCCccccccccccccccchhHHHHHHHHHHHHHHH
Q 030264 112 KDGLCPLDKLEAVRKKMKSL------SELHLIDGGDHSFKIGKKHLQTMGTTQDEMEGLAVQAIAAFIS 174 (180)
Q Consensus 112 ~D~~~~~~~~~~~~~~~~~~------~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 174 (180)
....++++..+.+++.++.. .++..+... .. ........+....+.+++||.
T Consensus 24 ~p~~v~~~aRD~LY~mLP~~ir~aLr~kL~~~~~~----~~-------~d~~~a~~~~~~m~kiL~WL~ 81 (89)
T PF05003_consen 24 RPSSVPPNARDDLYQMLPPSIRSALRSKLRSYWKK----AI-------YDELLAAEWKDAMEKILEWLA 81 (89)
T ss_pred CcccCCchHHHHHHhhCcHHHHHHHHHhccccccc----cc-------cchhhHHHHHHHHHHHHHHHH
Confidence 34567778888888887754 233332221 00 112223667888899999985
No 351
>PF13519 VWA_2: von Willebrand factor type A domain; PDB: 3IBS_B 3RAG_B 2X5N_A.
Probab=29.18 E-value=1.3e+02 Score=19.22 Aligned_cols=49 Identities=20% Similarity=0.208 Sum_probs=26.1
Q ss_pred EEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhH
Q 030264 10 EVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGS 62 (180)
Q Consensus 10 ~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg 62 (180)
.|+++|--|.=.+. .. .....+.+.+.+..+....+..++.++.++-++
T Consensus 2 vv~v~D~SgSM~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~v~l~~f~~~~ 50 (172)
T PF13519_consen 2 VVFVLDNSGSMNGY---DG-NRTRIDQAKDALNELLANLPGDRVGLVSFSDSS 50 (172)
T ss_dssp EEEEEE-SGGGGTT---TS-SS-HHHHHHHHHHHHHHHHTTSEEEEEEESTSC
T ss_pred EEEEEECCcccCCC---CC-CCcHHHHHHHHHHHHHHHCCCCEEEEEEecccc
Confidence 36788877731111 10 112334445555555444566699999998764
No 352
>PF15566 Imm18: Immunity protein 18
Probab=28.93 E-value=97 Score=16.27 Aligned_cols=28 Identities=18% Similarity=0.103 Sum_probs=19.2
Q ss_pred HHHHHHHHHHhhCCCCcEEEEeeChhHH
Q 030264 36 FHTDVVKGAVAKFPGHPLILAGKSMGSR 63 (180)
Q Consensus 36 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~ 63 (180)
.+.+.+..++...+...+.++--||||.
T Consensus 6 ~L~~~l~~L~~~~~~~H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 6 LLQDQLENLQEKEPFDHEHLMTPDWGGE 33 (52)
T ss_pred HHHHHHHHHHhccCCCCceecccccccc
Confidence 3444455555554566899999999995
No 353
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=27.73 E-value=49 Score=24.81 Aligned_cols=17 Identities=29% Similarity=0.397 Sum_probs=14.1
Q ss_pred EEEeeChhHHHHHHHhh
Q 030264 54 ILAGKSMGSRVSCMVAC 70 (180)
Q Consensus 54 ~l~G~S~Gg~~a~~~a~ 70 (180)
.++|||+|=+.|+.++.
T Consensus 127 ~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 127 VCAGLSLGEYTALVFAG 143 (343)
T ss_pred eeeeccHHHHHHHHHhC
Confidence 67999999988887664
No 354
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=27.58 E-value=3.2e+02 Score=21.77 Aligned_cols=65 Identities=15% Similarity=0.026 Sum_probs=44.7
Q ss_pred CCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhcc--ccccceEEE
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE--DIAASAVLC 81 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~~~~~~~~~ 81 (180)
..+|.|+.+|-.|+- ... +++-+-+..+.+......+.++--+|=|.-|...|... .-.+.++|+
T Consensus 180 ~~~~DvvIvDTAGRl-------~id----e~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIl 246 (451)
T COG0541 180 EEGYDVVIVDTAGRL-------HID----EELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVIL 246 (451)
T ss_pred HcCCCEEEEeCCCcc-------ccc----HHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEE
Confidence 457999999999852 112 23333344455555556788888999999998888773 346778887
No 355
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=27.18 E-value=57 Score=25.10 Aligned_cols=18 Identities=39% Similarity=0.708 Sum_probs=16.2
Q ss_pred EEEeeChhHHHHHHHhhc
Q 030264 54 ILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 54 ~l~G~S~Gg~~a~~~a~~ 71 (180)
.++|.|.|+.++..++..
T Consensus 47 ~IaGtSAGALvAAl~asG 64 (382)
T cd07219 47 RVAGTSAGSVIAALVVCG 64 (382)
T ss_pred eEEEEcHHHHHHHHHHhC
Confidence 599999999999998876
No 356
>PRK12467 peptide synthase; Provisional
Probab=27.10 E-value=4.1e+02 Score=27.95 Aligned_cols=60 Identities=15% Similarity=0.094 Sum_probs=35.4
Q ss_pred ceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc
Q 030264 8 AVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 8 g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
+..++.+..++...+.. .......+...+.+.+.+. .+..+..+.|+|+||.++..++..
T Consensus 3718 ~~~~~~l~~~~~~~d~~-~~~~~~~~~~~y~~~~~~~---~~~~p~~l~g~s~g~~~a~~~~~~ 3777 (3956)
T PRK12467 3718 DRHVLGLTCRHLLDDGW-QDTSLQAMAVQYADYILWQ---QAKGPYGLLGWSLGGTLARLVAEL 3777 (3956)
T ss_pred CCcEEEEeccccccccC-CccchHHHHHHHHHHHHHh---ccCCCeeeeeeecchHHHHHHHHH
Confidence 45667776666421111 2233333334444444443 344578999999999999888765
No 357
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=27.02 E-value=67 Score=19.82 Aligned_cols=31 Identities=10% Similarity=0.065 Sum_probs=22.5
Q ss_pred cEEEEe-eChhHHHHHHHhhccccccceEEEec
Q 030264 52 PLILAG-KSMGSRVSCMVACKEDIAASAVLCLG 83 (180)
Q Consensus 52 ~i~l~G-~S~Gg~~a~~~a~~~~~~~~~~~~~~ 83 (180)
+|+|+| ..+.|.-.+.++..+| .+.-+.+.+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp-~~e~~~~~~ 32 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHP-DFELVALVS 32 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTS-TEEEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCC-CccEEEeee
Confidence 588999 8999988888888865 444444434
No 358
>PRK14852 hypothetical protein; Provisional
Probab=26.89 E-value=3.8e+02 Score=23.91 Aligned_cols=34 Identities=12% Similarity=0.085 Sum_probs=24.9
Q ss_pred hCCCCcEEEEeeC-hhHHHHHHHhhccccccceEEEec
Q 030264 47 KFPGHPLILAGKS-MGSRVSCMVACKEDIAASAVLCLG 83 (180)
Q Consensus 47 ~~~~~~i~l~G~S-~Gg~~a~~~a~~~~~~~~~~~~~~ 83 (180)
.+...+|.|+|-+ .|+.++..++.. -|..+.++.
T Consensus 329 kL~~srVlVvGlGGlGs~ia~~LAra---GVG~I~L~D 363 (989)
T PRK14852 329 RLLRSRVAIAGLGGVGGIHLMTLART---GIGNFNLAD 363 (989)
T ss_pred HHhcCcEEEECCcHHHHHHHHHHHHc---CCCeEEEEc
Confidence 3455699999999 788888877776 356666655
No 359
>PF04204 HTS: Homoserine O-succinyltransferase ; InterPro: IPR005697 This family of enzymes, homoserine O-succinyltransferase, catalyses the first step in the biosynthesis of methionine: Succinyl-CoA + L-homoserine = CoA + O-succinyl-L-homoserine This enzyme is consequently essential for the survival of bacteria, plants and fungi. Since they are not found in humans, they make a promising new target for antimicrobial drug development. Homoserine O-succinyltransferase (HST) is a representative from this class and has recently had the key amino acids involved in substrate specificity and catalysis elucidated [].; GO: 0016746 transferase activity, transferring acyl groups, 0019281 L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine, 0005737 cytoplasm; PDB: 2H2W_A 2GHR_A 2VDJ_A.
Probab=26.83 E-value=2.6e+02 Score=20.85 Aligned_cols=45 Identities=9% Similarity=-0.141 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc-----cccccceEEE
Q 030264 33 LVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK-----EDIAASAVLC 81 (180)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-----~~~~~~~~~~ 81 (180)
..+.+.++++|.+.+ ....+..|||+..|+..-.- .+.++.||.-
T Consensus 119 YW~El~~i~dwa~~~----v~stl~iCWgAqAaLy~~yGI~K~~l~~KlfGVf~ 168 (298)
T PF04204_consen 119 YWDELTEIFDWAKTH----VTSTLFICWGAQAALYHFYGIPKYPLPEKLFGVFE 168 (298)
T ss_dssp THHHHHHHHHHHHHH----EEEEEEETHHHHHHHHHHH----EEEEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHc----CCcchhhhHHHHHHHHHHcCCCcccCCCcceecee
Confidence 368899999999887 46678889999998877654 3445555543
No 360
>cd01453 vWA_transcription_factor_IIH_type Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins contain a VWA domain. The p44 subunit of TFIIH functions as a DNA helicase in RNA polymerase II transcription initiation and DNA repair, and its transcriptional activity is dependent on its C-terminal Zn-binding domains. The function of the vWA domain is unclear, but may be involved in complex assembly. The MIDAS motif is not conserved in this sub-group.
Probab=26.58 E-value=2.1e+02 Score=19.29 Aligned_cols=50 Identities=8% Similarity=0.086 Sum_probs=26.2
Q ss_pred EEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeC
Q 030264 10 EVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKS 59 (180)
Q Consensus 10 ~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S 59 (180)
.++++|.-+.=......+.+.+.....+.+.++......+..+++++.+.
T Consensus 6 ivi~lD~S~SM~a~D~~ptRl~~ak~~~~~fi~~~~~~~~~~~vglv~f~ 55 (183)
T cd01453 6 LIIVIDCSRSMEEQDLKPSRLAVVLKLLELFIEEFFDQNPISQLGIISIK 55 (183)
T ss_pred EEEEEECcHHHhcCCCCchHHHHHHHHHHHHHHHHhhcCccccEEEEEEc
Confidence 46778877631111222334433344444444443334466789999883
No 361
>PRK09065 glutamine amidotransferase; Provisional
Probab=26.34 E-value=1.6e+02 Score=20.86 Aligned_cols=31 Identities=23% Similarity=0.241 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHh
Q 030264 35 EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVA 69 (180)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 69 (180)
....+.+..+... .+-++|.|+|..+...+.
T Consensus 75 ~~~~~~i~~~~~~----~~PvlGIC~G~Qlla~al 105 (237)
T PRK09065 75 ERTADWLRQAAAA----GMPLLGICYGHQLLAHAL 105 (237)
T ss_pred HHHHHHHHHHHHC----CCCEEEEChhHHHHHHHc
Confidence 3444444444332 356999999999887765
No 362
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=25.99 E-value=70 Score=23.40 Aligned_cols=27 Identities=22% Similarity=0.208 Sum_probs=21.0
Q ss_pred EEEeeChhHHHHHHHhhccccccceEE
Q 030264 54 ILAGKSMGSRVSCMVACKEDIAASAVL 80 (180)
Q Consensus 54 ~l~G~S~Gg~~a~~~a~~~~~~~~~~~ 80 (180)
.++|.|+|+.....+.++.+.+-..++
T Consensus 43 ~~~GvSAGA~n~~aYls~Q~gra~~~~ 69 (292)
T COG4667 43 LVVGVSAGALNLVAYLSKQRGRARRVI 69 (292)
T ss_pred eeeeecHhHHhHHHHhhcCCchHHHHH
Confidence 478999999999999988665544443
No 363
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=25.81 E-value=67 Score=20.88 Aligned_cols=12 Identities=25% Similarity=0.501 Sum_probs=10.6
Q ss_pred EEEEeeChhHHH
Q 030264 53 LILAGKSMGSRV 64 (180)
Q Consensus 53 i~l~G~S~Gg~~ 64 (180)
..++|.|.|+.+
T Consensus 70 ~vi~G~SAGA~i 81 (154)
T PF03575_consen 70 GVIIGTSAGAMI 81 (154)
T ss_dssp SEEEEETHHHHC
T ss_pred CEEEEEChHHhh
Confidence 688999999977
No 364
>PRK06490 glutamine amidotransferase; Provisional
Probab=25.70 E-value=1.9e+02 Score=20.54 Aligned_cols=18 Identities=11% Similarity=0.130 Sum_probs=14.6
Q ss_pred cEEEEeeChhHHHHHHHh
Q 030264 52 PLILAGKSMGSRVSCMVA 69 (180)
Q Consensus 52 ~i~l~G~S~Gg~~a~~~a 69 (180)
++-++|.|+|..+...+.
T Consensus 86 ~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 86 NKPFLGICLGAQMLARHL 103 (239)
T ss_pred CCCEEEECHhHHHHHHHc
Confidence 356999999999877765
No 365
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=25.43 E-value=1.1e+02 Score=20.13 Aligned_cols=46 Identities=11% Similarity=-0.047 Sum_probs=24.4
Q ss_pred CCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhH
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGS 62 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg 62 (180)
..+-.++++|-.|-. . ...++.+.+......-...-++++|-+.|=
T Consensus 65 ~~~~~~i~Ld~~Gk~------~-----sS~~fA~~l~~~~~~g~~~i~F~IGG~~G~ 110 (155)
T PF02590_consen 65 PPNDYVILLDERGKQ------L-----SSEEFAKKLERWMNQGKSDIVFIIGGADGL 110 (155)
T ss_dssp HTTSEEEEE-TTSEE-------------HHHHHHHHHHHHHTTS-EEEEEE-BTTB-
T ss_pred cCCCEEEEEcCCCcc------C-----ChHHHHHHHHHHHhcCCceEEEEEecCCCC
Confidence 345667788888741 0 124555556555554333357888888883
No 366
>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated
Probab=25.25 E-value=2.3e+02 Score=20.56 Aligned_cols=53 Identities=23% Similarity=0.204 Sum_probs=28.1
Q ss_pred CceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEe----eChhHHHH
Q 030264 7 DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAG----KSMGSRVS 65 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G----~S~Gg~~a 65 (180)
.|..++.+|.|.. . ..-...+..++.++++.+...-...-|++-| +|.|+-+.
T Consensus 16 ~~va~itlnrp~~--~----Nal~~~m~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~ 72 (275)
T PRK09120 16 DGIAWVTLNRPEK--R----NAMSPTLNREMIDVLDALEFDDDAGVLVLTGAGDAWSAGMDLK 72 (275)
T ss_pred CCEEEEEecCccc--c----cCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCceecCcCHH
Confidence 4577777777653 1 1122345567777777776532222233333 56666554
No 367
>COG0708 XthA Exonuclease III [DNA replication, recombination, and repair]
Probab=25.08 E-value=2.8e+02 Score=20.27 Aligned_cols=49 Identities=20% Similarity=0.381 Sum_probs=22.6
Q ss_pred CceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCC-CCcEEEEee
Q 030264 7 DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFP-GHPLILAGK 58 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~ 58 (180)
.++.|+.+=.|. |++...+.+..-.+-......++.+... ..+++++|-
T Consensus 99 ~~~~v~~~Y~Pn---G~~~~~~k~~yKl~f~~~l~~~l~~l~~~~~~~vl~GD 148 (261)
T COG0708 99 DGFRVINLYFPN---GSSIGLEKFDYKLRFLDALRNYLEELLKKGKPVVLCGD 148 (261)
T ss_pred CCEEEEEEEcCC---CCCCCCcchHHHHHHHHHHHHHHHHHhhcCCCEEEecc
Confidence 456666666665 4443334433332223333333333222 257777763
No 368
>PF08496 Peptidase_S49_N: Peptidase family S49 N-terminal; InterPro: IPR013703 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain is found to the N terminus of bacterial signal peptidases that belong to the MEROPS peptidase family S49 (protease IV family, clan SK) (see also IPR002142 from INTERPRO) [, ]. ; GO: 0004252 serine-type endopeptidase activity, 0005886 plasma membrane
Probab=25.00 E-value=1.7e+02 Score=19.34 Aligned_cols=49 Identities=18% Similarity=0.201 Sum_probs=31.0
Q ss_pred ceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHH
Q 030264 8 AVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRV 64 (180)
Q Consensus 8 g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~ 64 (180)
-=+++++|+-|- - .....+.+.+.+..++.-.. +.+.+.+-=-|-||.+
T Consensus 97 ~~r~~VldF~Gd---i--~A~~v~~LReeisail~~a~---~~DeV~~rLES~GG~V 145 (155)
T PF08496_consen 97 KPRLFVLDFKGD---I--KASEVESLREEISAILSVAT---PEDEVLVRLESPGGMV 145 (155)
T ss_pred CCeEEEEecCCC---c--cHHHHHHHHHHHHHHHHhCC---CCCeEEEEEecCCcee
Confidence 468999999983 2 23444455555555554443 3457888888888765
No 369
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=24.03 E-value=1.7e+02 Score=19.47 Aligned_cols=37 Identities=14% Similarity=0.275 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEeeC--hhHHHHHHHhhc
Q 030264 35 EFHTDVVKGAVAKFPGHPLILAGKS--MGSRVSCMVACK 71 (180)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~l~G~S--~Gg~~a~~~a~~ 71 (180)
..+..++++..-.+.++++.++|.| .|--+++++..+
T Consensus 21 ~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 21 LAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp HHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC
Confidence 4455555554445667799999999 577777777766
No 370
>PF14084 DUF4264: Protein of unknown function (DUF4264)
Probab=23.90 E-value=54 Score=17.18 Aligned_cols=12 Identities=25% Similarity=0.653 Sum_probs=9.3
Q ss_pred HHHHHHHHhhcC
Q 030264 168 AIAAFISKSLGE 179 (180)
Q Consensus 168 ~i~~fl~~~~~~ 179 (180)
.+.+||++.|+.
T Consensus 18 KvVDfLNktLK~ 29 (52)
T PF14084_consen 18 KVVDFLNKTLKD 29 (52)
T ss_pred HHHHHHhhhhhh
Confidence 478899888765
No 371
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=23.47 E-value=2.5e+02 Score=19.21 Aligned_cols=91 Identities=15% Similarity=0.264 Sum_probs=47.6
Q ss_pred CceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc-cc-cccceEEEecc
Q 030264 7 DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK-ED-IAASAVLCLGY 84 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-~~-~~~~~~~~~~~ 84 (180)
+++.++.+|-+|++ .......+.+...++.+ .+.+.+.++--++| .-.+..+.. +. ..+.++|+--
T Consensus 82 ~~~D~vlIDT~Gr~-------~~d~~~~~el~~~~~~~---~~~~~~LVlsa~~~-~~~~~~~~~~~~~~~~~~lIlTK- 149 (196)
T PF00448_consen 82 KGYDLVLIDTAGRS-------PRDEELLEELKKLLEAL---NPDEVHLVLSATMG-QEDLEQALAFYEAFGIDGLILTK- 149 (196)
T ss_dssp TTSSEEEEEE-SSS-------STHHHHHHHHHHHHHHH---SSSEEEEEEEGGGG-GHHHHHHHHHHHHSSTCEEEEES-
T ss_pred cCCCEEEEecCCcc-------hhhHHHHHHHHHHhhhc---CCccceEEEecccC-hHHHHHHHHHhhcccCceEEEEe-
Confidence 57999999999962 22233344555544444 23334444444444 444444433 22 3477777622
Q ss_pred CCCCCCcccc----hhhhccCCCcEEEEeecCC
Q 030264 85 PLKGMNGAVR----DELLLQITVPIMFVQGSKD 113 (180)
Q Consensus 85 ~~~~~~~~~~----~~~~~~~~~P~l~i~g~~D 113 (180)
.++..+ .+.+.....|+.++...++
T Consensus 150 ----lDet~~~G~~l~~~~~~~~Pi~~it~Gq~ 178 (196)
T PF00448_consen 150 ----LDETARLGALLSLAYESGLPISYITTGQR 178 (196)
T ss_dssp ----TTSSSTTHHHHHHHHHHTSEEEEEESSSS
T ss_pred ----ecCCCCcccceeHHHHhCCCeEEEECCCC
Confidence 222111 1234456778888876665
No 372
>PF14987 NADHdh_A3: NADH dehydrogenase 1 alpha subcomplex subunit 3
Probab=23.45 E-value=1.3e+02 Score=17.30 Aligned_cols=28 Identities=7% Similarity=0.131 Sum_probs=21.1
Q ss_pred HHHHHHhhCCCCcEEEEeeChhHHHHHH
Q 030264 40 VVKGAVAKFPGHPLILAGKSMGSRVSCM 67 (180)
Q Consensus 40 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~ 67 (180)
+-.+++..+..+++.++.+..||...+.
T Consensus 5 ~~afLKnAWaKEPVlvvSf~ig~lavil 32 (84)
T PF14987_consen 5 LGAFLKNAWAKEPVLVVSFVIGGLAVIL 32 (84)
T ss_pred HHHHHHHhhhcCCeEEeeehhhhhhhhc
Confidence 3456666777789999999999976543
No 373
>PRK13462 acid phosphatase; Provisional
Probab=23.24 E-value=2.6e+02 Score=19.21 Aligned_cols=32 Identities=9% Similarity=0.142 Sum_probs=21.8
Q ss_pred CchHHHHHHHHHHHHHHHhhCCCCcEEEEeeC
Q 030264 28 PKAEKLVEFHTDVVKGAVAKFPGHPLILAGKS 59 (180)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S 59 (180)
+...++..-+...++.+......+++.+++|.
T Consensus 117 ES~~~~~~Rv~~~l~~i~~~~~~~~vliVsHg 148 (203)
T PRK13462 117 ESVAQVNERADRAVALALEHMESRDVVFVSHG 148 (203)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCC
Confidence 34455556666667776665566689999887
No 374
>cd05007 SIS_Etherase N-acetylmuramic acid 6-phosphate etherase. Members of this family contain the SIS (Sugar ISomerase) domain. The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. The bacterial cell wall sugar N-acetylmuramic acid carries a unique D-lactyl ether substituent at the C3 position. The etherase catalyzes the cleavage of the lactyl ether bond of N-acetylmuramic acid 6-phosphate.
Probab=23.19 E-value=2.3e+02 Score=20.42 Aligned_cols=24 Identities=25% Similarity=0.379 Sum_probs=19.1
Q ss_pred CCCcEEEEeeChhHHHHHHHhhcc
Q 030264 49 PGHPLILAGKSMGSRVSCMVACKE 72 (180)
Q Consensus 49 ~~~~i~l~G~S~Gg~~a~~~a~~~ 72 (180)
...+++++|..-.|.++..-+...
T Consensus 48 ~ggrl~~~GaGtSg~la~~da~e~ 71 (257)
T cd05007 48 AGGRLIYVGAGTSGRLGVLDASEL 71 (257)
T ss_pred cCCEEEEEcCcHHHHHHHHHHHhc
Confidence 345899999999999997766553
No 375
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=23.18 E-value=3.3e+02 Score=20.44 Aligned_cols=99 Identities=12% Similarity=0.116 Sum_probs=50.5
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHH---hhCCCCcEEEEeeChhHHHHHHHhhcc--ccccceE
Q 030264 5 ALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAV---AKFPGHPLILAGKSMGSRVSCMVACKE--DIAASAV 79 (180)
Q Consensus 5 a~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~~~~~~~ 79 (180)
..++|.++.+|-+|+. ......++.+......+. ...+. .++++-.+.-|.-++.-+... ...+.++
T Consensus 193 ~~~~~D~ViIDTaGr~-------~~~~~l~~eL~~~~~v~~~~~~~~p~-~~~LVl~a~~g~~~~~~a~~f~~~~~~~gi 264 (318)
T PRK10416 193 KARGIDVLIIDTAGRL-------HNKTNLMEELKKIKRVIKKADPDAPH-EVLLVLDATTGQNALSQAKAFHEAVGLTGI 264 (318)
T ss_pred HhCCCCEEEEeCCCCC-------cCCHHHHHHHHHHHHHHhhhcCCCCc-eEEEEEECCCChHHHHHHHHHHhhCCCCEE
Confidence 3578999999999962 112233344444333332 22233 445555555666666555442 2346677
Q ss_pred EEeccCCCCCCcccchhhhccCCCcEEEEeecC
Q 030264 80 LCLGYPLKGMNGAVRDELLLQITVPIMFVQGSK 112 (180)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 112 (180)
|+--.-.... ...-.+.......|+.++.-.+
T Consensus 265 IlTKlD~t~~-~G~~l~~~~~~~~Pi~~v~~Gq 296 (318)
T PRK10416 265 ILTKLDGTAK-GGVVFAIADELGIPIKFIGVGE 296 (318)
T ss_pred EEECCCCCCC-ccHHHHHHHHHCCCEEEEeCCC
Confidence 7622111101 1111233455688998887544
No 376
>PF14350 Beta_protein: Beta protein
Probab=22.83 E-value=2.9e+02 Score=20.82 Aligned_cols=22 Identities=32% Similarity=0.481 Sum_probs=9.6
Q ss_pred HHHHHhhCCCCcEEEEeeChhH
Q 030264 41 VKGAVAKFPGHPLILAGKSMGS 62 (180)
Q Consensus 41 ~~~~~~~~~~~~i~l~G~S~Gg 62 (180)
+..+....+...|++.|.|+=.
T Consensus 181 l~~l~~~~~~~~v~v~~tSfP~ 202 (347)
T PF14350_consen 181 LNSLPSLFPWRSVIVAGTSFPS 202 (347)
T ss_pred HHhhhhccCCeEEEEEecccCC
Confidence 3333333344445555544433
No 377
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=22.60 E-value=1.4e+02 Score=18.49 Aligned_cols=30 Identities=17% Similarity=0.077 Sum_probs=21.0
Q ss_pred HHHHHHHHHHhhCCCCcEEEEeeChhHHHH
Q 030264 36 FHTDVVKGAVAKFPGHPLILAGKSMGSRVS 65 (180)
Q Consensus 36 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a 65 (180)
+....+.+....+..+.|.++||+--|.+.
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~ 73 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVK 73 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHH
Confidence 344555665666677799999998766655
No 378
>COG5023 Tubulin [Cytoskeleton]
Probab=22.38 E-value=1.1e+02 Score=23.53 Aligned_cols=35 Identities=14% Similarity=0.217 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHH
Q 030264 32 KLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSC 66 (180)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~ 66 (180)
.+.+++.+.++...+..+.-+=+++=||+||....
T Consensus 111 e~~ddvmd~IrreAd~cD~LqGF~l~HS~gGGTGS 145 (443)
T COG5023 111 EIIDDVMDMIRREADGCDGLQGFLLLHSLGGGTGS 145 (443)
T ss_pred HHHHHHHHHHHHHhhcCccccceeeeeeccCcCcc
Confidence 34566666666665555555778888888775443
No 379
>PF09345 DUF1987: Domain of unknown function (DUF1987); InterPro: IPR018530 This family of proteins are functionally uncharacterised.
Probab=21.58 E-value=1.6e+02 Score=17.81 Aligned_cols=21 Identities=24% Similarity=0.142 Sum_probs=17.1
Q ss_pred hHHHHHHHHHHHHHHHHhhcC
Q 030264 159 DEMEGLAVQAIAAFISKSLGE 179 (180)
Q Consensus 159 ~~~~~~~~~~i~~fl~~~~~~ 179 (180)
++.+..+..-+++||+.++++
T Consensus 20 pEn~~~Fy~Pi~~wl~~Yl~~ 40 (99)
T PF09345_consen 20 PENAFAFYQPILDWLEAYLAE 40 (99)
T ss_pred ccCHHHHHHHHHHHHHHHHhC
Confidence 466788999999999988753
No 380
>PRK03204 haloalkane dehalogenase; Provisional
Probab=21.42 E-value=3.2e+02 Score=19.68 Aligned_cols=42 Identities=10% Similarity=-0.015 Sum_probs=27.6
Q ss_pred CCcEEEEeecCCCCCChHHHHHHHHHccCCcEEEEEcCCCCcccc
Q 030264 102 TVPIMFVQGSKDGLCPLDKLEAVRKKMKSLSELHLIDGGDHSFKI 146 (180)
Q Consensus 102 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 146 (180)
..|++++||-.+. ......+...+....+++.++--||+...
T Consensus 34 ~~~iv~lHG~~~~---~~~~~~~~~~l~~~~~vi~~D~~G~G~S~ 75 (286)
T PRK03204 34 GPPILLCHGNPTW---SFLYRDIIVALRDRFRCVAPDYLGFGLSE 75 (286)
T ss_pred CCEEEEECCCCcc---HHHHHHHHHHHhCCcEEEEECCCCCCCCC
Confidence 4689999997642 23344455556555778888777887653
No 381
>smart00864 Tubulin Tubulin/FtsZ family, GTPase domain. This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.
Probab=21.31 E-value=1.9e+02 Score=19.58 Aligned_cols=31 Identities=13% Similarity=0.161 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHH
Q 030264 32 KLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVS 65 (180)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a 65 (180)
...++..+.+....+. -..+++=||+||...
T Consensus 67 ~~~~~~~~~ir~~le~---~d~~~i~~slgGGTG 97 (192)
T smart00864 67 EAAEESLDEIREELEG---ADGVFITAGMGGGTG 97 (192)
T ss_pred HHHHHHHHHHHHHhcC---CCEEEEeccCCCCcc
Confidence 3334444444433333 267777888887443
No 382
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=21.23 E-value=2.4e+02 Score=18.83 Aligned_cols=37 Identities=11% Similarity=0.176 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEeeC-hhHHHHHHHhhc
Q 030264 35 EFHTDVVKGAVAKFPGHPLILAGKS-MGSRVSCMVACK 71 (180)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~l~G~S-~Gg~~a~~~a~~ 71 (180)
....+.++.....+.++++.++|-+ ++|..+..++..
T Consensus 29 ~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~ 66 (168)
T cd01080 29 AGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLN 66 (168)
T ss_pred HHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhh
Confidence 3344444444444567799999999 566644444444
No 383
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=21.18 E-value=2.6e+02 Score=18.53 Aligned_cols=41 Identities=20% Similarity=0.228 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHhhc
Q 030264 31 EKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 71 (180)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 71 (180)
++..+.+.++..++.+.+..++..++|-.-||..-.....+
T Consensus 6 ~~i~~~i~~lA~~I~~~~~~~~~vvv~i~~GG~~~a~~l~~ 46 (166)
T TIGR01203 6 EQIKARIAELAKQITEDYAGKPLVLLCVLKGSFPFFADLIR 46 (166)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCeEEEEEccCCHHHHHHHHH
Confidence 44556666666777666655689999999999885555444
No 384
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=20.99 E-value=2.9e+02 Score=21.56 Aligned_cols=52 Identities=12% Similarity=0.064 Sum_probs=34.4
Q ss_pred ceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHH
Q 030264 8 AVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSR 63 (180)
Q Consensus 8 g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~ 63 (180)
-|.++.+|-|.++ ++.... .....++.+++......+...-+.++-.|.+..
T Consensus 290 ~fDlIilDPPsF~--r~k~~~--~~~~rdy~~l~~~~~~iL~pgG~l~~~s~~~~~ 341 (393)
T COG1092 290 KFDLIILDPPSFA--RSKKQE--FSAQRDYKDLNDLALRLLAPGGTLVTSSCSRHF 341 (393)
T ss_pred cccEEEECCcccc--cCcccc--hhHHHHHHHHHHHHHHHcCCCCEEEEEecCCcc
Confidence 5999999999984 322222 566677888877777765555566655555543
No 385
>PRK06127 enoyl-CoA hydratase; Provisional
Probab=20.87 E-value=3.3e+02 Score=19.63 Aligned_cols=36 Identities=14% Similarity=0.132 Sum_probs=21.8
Q ss_pred CCceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 030264 6 LDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK 47 (180)
Q Consensus 6 ~~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 47 (180)
..|..++.+|.|.. ...-...+.+++.++++.+...
T Consensus 18 ~~~v~~itlnrp~~------~Nal~~~~~~~l~~~l~~~~~d 53 (269)
T PRK06127 18 TGGLGRITFNNPAR------HNAMSLDMWEALPQALAAAEDD 53 (269)
T ss_pred ECCEEEEEecCCCc------cCCCCHHHHHHHHHHHHHHHhC
Confidence 35678888887763 1122234456777777777654
No 386
>PRK13690 hypothetical protein; Provisional
Probab=20.79 E-value=2.9e+02 Score=18.88 Aligned_cols=32 Identities=9% Similarity=0.205 Sum_probs=22.4
Q ss_pred hHHHHHHHHHHHHHHHhh--CCCCcEEEEeeChh
Q 030264 30 AEKLVEFHTDVVKGAVAK--FPGHPLILAGKSMG 61 (180)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~G 61 (180)
.+.+.+++.+.+.++.+. +....++++|-|..
T Consensus 3 ~~~i~~~~~~~~~El~~~a~l~~g~i~VvGcSTS 36 (184)
T PRK13690 3 LEEIKKQTRQILEELLEQANLKPGQIFVLGCSTS 36 (184)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCEEEEecchH
Confidence 345567777777777664 44458999999964
No 387
>PRK08321 naphthoate synthase; Validated
Probab=20.58 E-value=3.2e+02 Score=20.20 Aligned_cols=52 Identities=15% Similarity=0.090 Sum_probs=27.9
Q ss_pred CceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEE-e-----------eChhHHHH
Q 030264 7 DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILA-G-----------KSMGSRVS 65 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~-G-----------~S~Gg~~a 65 (180)
.|..++.+|.|.. ...-...+..++.++++.+...-.. +++|+ | +|.|+-+.
T Consensus 33 ~~va~itlnrP~~------~Nal~~~~~~~l~~al~~~~~d~~v-rvvVltg~g~~~~~~~~~FcaG~Dl~ 96 (302)
T PRK08321 33 QGTVRIAFDRPEV------RNAFRPHTVDELYRALDHARMSPDV-GCVLLTGNGPSPKDGGWAFCSGGDQR 96 (302)
T ss_pred CCEEEEEeCCccc------ccCCCHHHHHHHHHHHHHHhhCCCc-EEEEEeCCCCCCCCCCCeeecCcChh
Confidence 4566666666642 1112234567777777776543222 44443 2 67777654
No 388
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=20.55 E-value=2.7e+02 Score=18.45 Aligned_cols=10 Identities=20% Similarity=0.308 Sum_probs=5.6
Q ss_pred cEEEEeeChh
Q 030264 52 PLILAGKSMG 61 (180)
Q Consensus 52 ~i~l~G~S~G 61 (180)
-++++|-+.|
T Consensus 100 i~F~IGGa~G 109 (157)
T PRK00103 100 VAFVIGGADG 109 (157)
T ss_pred EEEEEcCccc
Confidence 4555665555
No 389
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=20.41 E-value=2.5e+02 Score=18.78 Aligned_cols=51 Identities=12% Similarity=0.125 Sum_probs=32.9
Q ss_pred CceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhH
Q 030264 7 DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGS 62 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg 62 (180)
+|+..+++|--.+- ..+.......+....+...+..++.+.+.++.-|.|.
T Consensus 41 ~~ikavVlDKDNci-----t~P~~~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~ 91 (190)
T KOG2961|consen 41 KGIKAVVLDKDNCI-----TAPYSLAIWPPLLPSIERCKAVYGEKDIAVFSNSAGL 91 (190)
T ss_pred cCceEEEEcCCCee-----eCCcccccCchhHHHHHHHHHHhCcccEEEEecCcCc
Confidence 46667777765531 1111223345566667777888888899999999985
No 390
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.30 E-value=1.7e+02 Score=19.82 Aligned_cols=33 Identities=18% Similarity=0.164 Sum_probs=23.9
Q ss_pred HHHHHHHHHhhCCCCcEEEEeeChhHHHHHHHh
Q 030264 37 HTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVA 69 (180)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 69 (180)
....+++....+..+.|+++|||-=|.+...+.
T Consensus 67 ~~asleyAv~~L~v~~IvV~GHs~CGav~a~~~ 99 (182)
T cd00883 67 CLSVLQYAVDVLKVKHIIVCGHYGCGGVKAALT 99 (182)
T ss_pred hhhhHHHHHHhcCCCEEEEecCCCchHHHHHHc
Confidence 455666666667777999999998776655443
No 391
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=20.12 E-value=3e+02 Score=19.73 Aligned_cols=61 Identities=16% Similarity=0.032 Sum_probs=31.4
Q ss_pred CceEEEEEeccCCCCCCCCCCCchHHHHHHHHHHHHHHHhhCCCCcEEEEeeChhHHHHHH
Q 030264 7 DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCM 67 (180)
Q Consensus 7 ~g~~v~~~d~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~ 67 (180)
+.=.|+.+|-+|...|.+...-........+.+++...+..-..-=-.++|++++|.+-..
T Consensus 64 krpIv~lVD~~sQa~grreEllGi~~alAhla~a~a~AR~~GHpvI~Lv~G~A~SGaFLA~ 124 (234)
T PF06833_consen 64 KRPIVALVDVPSQAYGRREELLGINQALAHLAKAYALARLAGHPVIGLVYGKAMSGAFLAH 124 (234)
T ss_pred CCCEEEEEeCCccccchHHHHhhHHHHHHHHHHHHHHHHHcCCCeEEEEecccccHHHHHH
Confidence 3456778888875323322223333334555555555554322212235899987655433
No 392
>KOG3086 consensus Predicted dioxygenase [General function prediction only]
Probab=20.07 E-value=3.6e+02 Score=19.66 Aligned_cols=59 Identities=10% Similarity=0.059 Sum_probs=36.5
Q ss_pred CCchHHHHHHHHHHHHHHHhhCCCCcEEE---EeeChhHHHHHHH-hhccccccceEEEeccC
Q 030264 27 PPKAEKLVEFHTDVVKGAVAKFPGHPLIL---AGKSMGSRVSCMV-ACKEDIAASAVLCLGYP 85 (180)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l---~G~S~Gg~~a~~~-a~~~~~~~~~~~~~~~~ 85 (180)
......+..++..++.......+..+.++ .|++.-|..|..+ ....+..+.+++++++.
T Consensus 16 t~~~~~Ls~QL~~wL~~~~~~~~paRaiIaPHAGY~YcG~~Aa~ay~qvdps~v~RIFILGPS 78 (296)
T KOG3086|consen 16 TASGPQLSAQLEGWLSQVTLTKGPARAIIAPHAGYTYCGSCAAYAYKQVDPSNVQRIFILGPS 78 (296)
T ss_pred cCCHHHHHHHHHHHHhccCCCCCCceEEEcCCCCcccchHHHHHHHhhcChhHeeEEEEecCc
Confidence 44455555666666655544434445555 5777766655544 44477889999998853
Done!