BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030272
(180 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54001|P4HA1_RAT Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1
PE=2 SV=2
Length = 534
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 89/178 (50%), Gaps = 23/178 (12%)
Query: 1 MRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFTFFPLENGEGLQVLH 60
+ ++TV D +TGK ++ R S +L+ D ++ I RI D T + E LQV +
Sbjct: 360 LSRATVHDPETGKLTTAQYRVSKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVAN 419
Query: 61 YEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVP 116
Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP
Sbjct: 420 YGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFP---------- 469
Query: 117 WWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 174
+ G S+ PK G A+ ++++ D S+ H CPV+ GNKW S KW+
Sbjct: 470 ---------EVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLH 518
>sp|P16924|P4HA1_CHICK Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1
SV=1
Length = 516
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 88/177 (49%), Gaps = 23/177 (12%)
Query: 1 MRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFTFFPLENGEGLQVLH 60
+ ++TV D +TGK + R S +L+ ++ I RI D T + E LQV +
Sbjct: 342 LSRATVHDPETGKLTTAHYRVSKSAWLSGYESPVVSRINTRIQDLTGLDVSTAEELQVAN 401
Query: 61 YEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVP 116
Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP
Sbjct: 402 YGVGGQYEPHFDFGRKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFP---------- 451
Query: 117 WWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWI 173
+ G S+ PK G A+ ++++ P D S+ H CPV+ GNKW S KW+
Sbjct: 452 ---------EVGASVWPKKGTAVFWYNLFPSGEGDYSTRHAACPVLVGNKWVSNKWL 499
>sp|Q20065|P4HA2_CAEEL Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans
GN=phy-2 PE=1 SV=1
Length = 539
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 90/177 (50%), Gaps = 23/177 (12%)
Query: 1 MRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFTFFPLENGEGLQVLH 60
++++TV +S TG+ + + R S +L D +I + +RI DFT E LQV +
Sbjct: 350 LKRATVQNSKTGELEHATYRISKSAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVAN 409
Query: 61 YEAGQKYEPHFDYFMDE----FNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVP 116
Y G Y+PHFD+ E F T N G R+ATVL Y+S E GG TVF
Sbjct: 410 YGLGGHYDPHFDFARKEEKNAFKTLNTGNRIATVLFYMSQPERGGATVF----------- 458
Query: 117 WWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWI 173
N L G ++ P DAL +++++ D D + H CPV+ G KW S KWI
Sbjct: 459 --NHL------GTAVFPSKNDALFWYNLRRDGEGDLRTRHAACPVLLGVKWVSNKWI 507
>sp|Q60715|P4HA1_MOUSE Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2
SV=2
Length = 534
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 87/178 (48%), Gaps = 23/178 (12%)
Query: 1 MRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFTFFPLENGEGLQVLH 60
+R++T+ + TG + R S +L+ D ++ I RI D T + E LQV +
Sbjct: 360 LRRATISNPVTGALETVHYRISKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVAN 419
Query: 61 YEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVP 116
Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP
Sbjct: 420 YGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFP---------- 469
Query: 117 WWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 174
+ G S+ PK G A+ ++++ D S+ H CPV+ GNKW S KW+
Sbjct: 470 ---------EVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLH 518
>sp|Q5RAG8|P4HA1_PONAB Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2
SV=1
Length = 534
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 87/178 (48%), Gaps = 23/178 (12%)
Query: 1 MRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFTFFPLENGEGLQVLH 60
+R++T+ + TG + R S +L+ + ++ I RI D T + E LQV +
Sbjct: 360 LRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVAN 419
Query: 61 YEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVP 116
Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP
Sbjct: 420 YGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFP---------- 469
Query: 117 WWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 174
+ G S+ PK G A+ ++++ D S+ H CPV+ GNKW S KW+
Sbjct: 470 ---------EVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLH 518
>sp|P13674|P4HA1_HUMAN Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1
SV=2
Length = 534
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 87/178 (48%), Gaps = 23/178 (12%)
Query: 1 MRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFTFFPLENGEGLQVLH 60
+R++T+ + TG + R S +L+ + ++ I RI D T + E LQV +
Sbjct: 360 LRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVAN 419
Query: 61 YEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVP 116
Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP
Sbjct: 420 YGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFP---------- 469
Query: 117 WWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 174
+ G S+ PK G A+ ++++ D S+ H CPV+ GNKW S KW+
Sbjct: 470 ---------EVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLH 518
>sp|Q1RMU3|P4HA1_BOVIN Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1
SV=1
Length = 534
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 87/178 (48%), Gaps = 23/178 (12%)
Query: 1 MRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFTFFPLENGEGLQVLH 60
+R++T+ + TG + R S +L+ + ++ I RI D T + E LQV +
Sbjct: 360 LRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVAN 419
Query: 61 YEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVP 116
Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP
Sbjct: 420 YGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVLAGGATVFP---------- 469
Query: 117 WWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 174
+ G S+ PK G A+ ++++ D S+ H CPV+ GNKW S KW+
Sbjct: 470 ---------EVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLH 518
>sp|Q5ZLK5|P4HA2_CHICK Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2
SV=1
Length = 534
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFTFFPLENGEGLQVLH 60
+ ++TV D TG + R S ++L D ++ + +R+ T ++ E LQV +
Sbjct: 362 LARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVAKVNQRMQQITGLTVKTAELLQVAN 421
Query: 61 YEAGQKYEPHFDYFMDEFNT--KNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWW 118
Y G +YEPHFD+ F++ K+ G R+AT L Y+SDVE GG TVFP+
Sbjct: 422 YGMGGQYEPHFDFSRRPFDSTLKSEGNRLATFLNYMSDVEAGGATVFPDF---------- 471
Query: 119 NELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWI--RVN 176
G +I PK G A+ ++++ D + H CPV+ G KW S KW R N
Sbjct: 472 ---------GAAIWPKKGTAVFWYNLFRSGEGDYRTRHAACPVLVGCKWVSNKWFHERGN 522
Query: 177 EY 178
E+
Sbjct: 523 EF 524
>sp|O15460|P4HA2_HUMAN Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1
SV=1
Length = 535
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 85/177 (48%), Gaps = 23/177 (12%)
Query: 1 MRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFTFFPLENGEGLQVLH 60
+ ++TV D TG + R S ++L D ++ + +R+ T ++ E LQV +
Sbjct: 361 LARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVAN 420
Query: 61 YEAGQKYEPHFDYF----MDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVP 116
Y G +YEPHFD+ D F G R+AT L Y+SDVE GG TVFP+
Sbjct: 421 YGVGGQYEPHFDFSRNDERDTFKHLGTGNRVATFLNYMSDVEAGGATVFPD--------- 471
Query: 117 WWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWI 173
G +I PK G A+ ++++ D + H CPV+ G KW S KW
Sbjct: 472 ----------LGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKWF 518
>sp|Q60716|P4HA2_MOUSE Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2
SV=1
Length = 537
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 85/177 (48%), Gaps = 23/177 (12%)
Query: 1 MRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFTFFPLENGEGLQVLH 60
+ ++TV D TG + R S ++L D ++ + +R+ T ++ E LQV +
Sbjct: 363 LARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVAN 422
Query: 61 YEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVP 116
Y G +YEPHFD+ D F G R+AT L Y+SDVE GG TVFP+
Sbjct: 423 YGMGGQYEPHFDFSRSDDEDAFKRLGTGNRVATFLNYMSDVEAGGATVFPD--------- 473
Query: 117 WWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWI 173
G +I PK G A+ ++++ D + H CPV+ G KW S KW
Sbjct: 474 ----------LGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKWF 520
>sp|Q10576|P4HA1_CAEEL Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans
GN=dpy-18 PE=1 SV=2
Length = 559
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 88/185 (47%), Gaps = 25/185 (13%)
Query: 1 MRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFTFFPLENGEGLQVLH 60
+ ++TV DS TGK + R S +L ++ + KRI T +E E LQ+ +
Sbjct: 353 LARATVHDSVTGKLVTATYRISKSAWLKEWEGDVVETVNKRIGYMTNLEMETAEELQIAN 412
Query: 61 YEAGQKYEPHFDYFMDE----FNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVP 116
Y G Y+PHFD+ E F + G R+ATVL Y+S GG TVF A+
Sbjct: 413 YGIGGHYDPHFDHAKKEESKSFESLGTGNRIATVLFYMSQPSHGGGTVFTEAKS------ 466
Query: 117 WWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWI--R 174
+I P DAL ++++ +P + H CPV+ G KW S KWI +
Sbjct: 467 -------------TILPTKNDALFWYNLYKQGDGNPDTRHAACPVLVGIKWVSNKWIHEK 513
Query: 175 VNEYK 179
NE++
Sbjct: 514 GNEFR 518
>sp|Q5UP57|P4H_MIMIV Putative prolyl 4-hydroxylase OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L593 PE=1 SV=1
Length = 242
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 80/176 (45%), Gaps = 28/176 (15%)
Query: 6 VVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFTFFPLENGEGLQVLHYEAGQ 65
+ DS D +R S ++++ + +++ I + I P +N E LQV+ Y Q
Sbjct: 83 LFDSQVLSGTDKNIRNSQQMWISKN-NPMVKPIFENICRQFNVPFDNAEDLQVVRYLPNQ 141
Query: 66 KYEPHFDYFMD------EFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWN 119
Y H D D EF + GGQR+ TVL+YL++ G T FPN
Sbjct: 142 YYNEHHDSCCDSSKQCSEF-IERGGQRILTVLIYLNNEFSDGHTYFPNLNQ--------- 191
Query: 120 ELSECGKTGLSIKPKMGDALLFWSMKPDAS-LDPSSLHGGCPVIKGNKWSSTKWIR 174
KPK GDAL+F+ + +++ P SLH G PV G KW + W R
Sbjct: 192 ----------KFKPKTGDALVFYPLANNSNKCHPYSLHAGMPVTSGEKWIANLWFR 237
>sp|Q6W3E9|P4HA3_RAT Prolyl 4-hydroxylase subunit alpha-3 OS=Rattus norvegicus GN=P4ha3
PE=2 SV=1
Length = 544
Score = 84.3 bits (207), Expect = 3e-16, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 28/179 (15%)
Query: 1 MRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFTFFPLEN--GEGLQV 58
+++S V + K R S +L D ++ +++RIA T ++ E LQV
Sbjct: 371 LQRSVVASGE--KQLQVEYRISKSAWLKDTVDPVLVTLDRRIAALTGLDIQPPYAEYLQV 428
Query: 59 LHYEAGQKYEPHFDYFMDE---FNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAV 115
++Y G YEPHFD+ G R AT+++YLS VE GG T F GN S
Sbjct: 429 VNYGIGGHYEPHFDHATSPSSPLYKMKSGNRAATLMIYLSSVEAGGATAF--IYGNFSV- 485
Query: 116 PWWNELSECGKTGLSIKPKMGDALLFW-SMKPDASLDPSSLHGGCPVIKGNKWSSTKWI 173
P + +A LFW ++ D +LH GCPV+ G+KW + KWI
Sbjct: 486 -----------------PVVKNAALFWWNLHRSGEGDDDTLHAGCPVLVGDKWVANKWI 527
>sp|Q75UG4|P4HA3_BOVIN Prolyl 4-hydroxylase subunit alpha-3 OS=Bos taurus GN=P4HA3 PE=2
SV=1
Length = 544
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 26/160 (16%)
Query: 20 RTSSGTFLARGRDKIIRDIEKRIADFTFFPLEN--GEGLQVLHYEAGQKYEPHFDYFMDE 77
R S +L D ++ ++ RIA T ++ E LQV++Y G YEPHFD+
Sbjct: 388 RISKSAWLKDTVDPVLVTLDHRIAALTGLDVQPPYAEYLQVVNYGIGGHYEPHFDHATSP 447
Query: 78 ---FNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPK 134
N G R+AT ++YLS VE GG T F GN S P
Sbjct: 448 SSPLYRMNSGNRVATFMIYLSSVEAGGATAF--IYGNFSV------------------PV 487
Query: 135 MGDALLFW-SMKPDASLDPSSLHGGCPVIKGNKWSSTKWI 173
+ +A LFW ++ D +LH CPV+ G+KW + KWI
Sbjct: 488 VKNAALFWWNLHRSGEGDGDTLHAACPVLVGDKWVANKWI 527
>sp|Q6W3F0|P4HA3_MOUSE Prolyl 4-hydroxylase subunit alpha-3 OS=Mus musculus GN=P4ha3 PE=2
SV=1
Length = 542
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 82/179 (45%), Gaps = 28/179 (15%)
Query: 1 MRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFTFFPLE--NGEGLQV 58
+++S V + K R S +L D ++ ++ RIA T ++ E LQV
Sbjct: 369 LQRSVVASGE--KQLQVEYRISKSAWLKDTVDPMLVTLDHRIAALTGLDIQPPYAEYLQV 426
Query: 59 LHYEAGQKYEPHFDYFMDE---FNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAV 115
++Y G YEPHFD+ G R+AT ++YLS VE GG T F GN S
Sbjct: 427 VNYGIGGHYEPHFDHATSPSSPLYRMKSGNRVATFMIYLSSVEAGGATAF--IYGNFSV- 483
Query: 116 PWWNELSECGKTGLSIKPKMGDALLFW-SMKPDASLDPSSLHGGCPVIKGNKWSSTKWI 173
P + +A LFW ++ D +LH GCPV+ G+KW + KWI
Sbjct: 484 -----------------PVVKNAALFWWNLHRSGEGDGDTLHAGCPVLVGDKWVANKWI 525
>sp|Q9NXG6|P4HTM_HUMAN Transmembrane prolyl 4-hydroxylase OS=Homo sapiens GN=P4HTM PE=1
SV=2
Length = 502
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 85/195 (43%), Gaps = 42/195 (21%)
Query: 19 VRTSSGTFLARGR--DKIIRDIEKRIADFTFFP---LENGEGLQVLHYEAGQKYEPHFD- 72
VR S T+L +G I+R I +R+ T +E E LQV+ Y G Y H D
Sbjct: 272 VRNSHHTWLYQGEGAHHIMRAIRQRVLRLTRLSPEIVELSEPLQVVRYGEGGHYHAHVDS 331
Query: 73 -------------YFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWN 119
+E R TVL YL++V GGETVFP A ++
Sbjct: 332 GPVYPETICSHTKLVANESVPFETSCRYMTVLFYLNNVTGGGETVFPVADNRT-----YD 386
Query: 120 ELS-------------ECGKTGLSIKPKMGDALLFWSMKPDAS-----LDPSSLHGGCPV 161
E+S C K L +KP+ G A+ +++ PD +D SLHGGC V
Sbjct: 387 EMSLIQDDVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDGQGWVGDVDDYSLHGGCLV 446
Query: 162 IKGNKWSSTKWIRVN 176
+G KW + WI V+
Sbjct: 447 TRGTKWIANNWINVD 461
>sp|Q8BG58|P4HTM_MOUSE Transmembrane prolyl 4-hydroxylase OS=Mus musculus GN=P4htm PE=2
SV=1
Length = 503
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 85/195 (43%), Gaps = 42/195 (21%)
Query: 19 VRTSSGTFLARGR--DKIIRDIEKRIADFTFFP---LENGEGLQVLHYEAGQKYEPHFD- 72
VR S T+L +G ++R I +R+ T +E E LQV+ Y G Y H D
Sbjct: 273 VRNSHHTWLHQGEGAHHVMRAIRQRVLRLTRLSPEIVEFSEPLQVVRYGEGGHYHAHVDS 332
Query: 73 -------------YFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWN 119
+E R TVL YL++V GGETVFP A ++
Sbjct: 333 GPVYPETICSHTKLVANESVPFETSCRYMTVLFYLNNVTGGGETVFPVADNRT-----YD 387
Query: 120 ELS-------------ECGKTGLSIKPKMGDALLFWSMKPDAS-----LDPSSLHGGCPV 161
E+S C K L +KP+ G A+ +++ PD +D SLHGGC V
Sbjct: 388 EMSLIQDDVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDGQGWVGEVDDYSLHGGCLV 447
Query: 162 IKGNKWSSTKWIRVN 176
+G KW + WI V+
Sbjct: 448 TRGTKWIANNWINVD 462
>sp|Q7Z4N8|P4HA3_HUMAN Prolyl 4-hydroxylase subunit alpha-3 OS=Homo sapiens GN=P4HA3 PE=1
SV=1
Length = 544
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 77/179 (43%), Gaps = 26/179 (14%)
Query: 1 MRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFTFFPLE--NGEGLQV 58
+++S V + K R S +L D + + RIA T + E LQV
Sbjct: 371 LQRSVVASGE--KQLQVEYRISKSAWLKDTVDPKLVTLNHRIAALTGLDVRPPYAEYLQV 428
Query: 59 LHYEAGQKYEPHFDYFMDE---FNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAV 115
++Y G YEPHFD+ G R+AT ++YLS VE GG T F A
Sbjct: 429 VNYGIGGHYEPHFDHATSPSSPLYRMKSGNRVATFMIYLSSVEAGGATAFIYA------- 481
Query: 116 PWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 174
LS+ AL +W++ D +LH GCPV+ G+KW + KWI
Sbjct: 482 ------------NLSVPVVRNAALFWWNLHRSGEGDSDTLHAGCPVLVGDKWVANKWIH 528
>sp|Q0AP20|Y1675_MARMM PKHD-type hydroxylase Mmar10_1675 OS=Maricaulis maris (strain
MCS10) GN=Mmar10_1675 PE=3 SV=1
Length = 219
Score = 34.7 bits (78), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 35/120 (29%)
Query: 58 VLHYEAGQKYEPHFDYFMDEFNTKNGGQRM-ATVLMYLSDVE--EGGETVFPNAQGNISA 114
V Y G Y PH D + GG+R + ++LSD + +GGE V G
Sbjct: 83 VSRYRDGMAYGPHID------DALMGGRRADLSFTLFLSDPDSYDGGELVMDGPDGETE- 135
Query: 115 VPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 174
IK GDA+++ + S++H PV +G + + W+R
Sbjct: 136 ----------------IKLAAGDAVVYAT---------SAIHQVAPVTRGERVAVVGWVR 170
>sp|Q9JI18|LRP1B_MOUSE Low-density lipoprotein receptor-related protein 1B OS=Mus musculus
GN=Lrp1b PE=2 SV=1
Length = 4599
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 26 FLARGRDKIIR--DIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNG 83
F +GR I+R D+ +IAD P+EN + L + A E ++ YF D + G
Sbjct: 526 FYGKGRPGIVRGMDLNTKIADECMIPIENLVNPRALDFHA----EANYIYFADTTSFLIG 581
Query: 84 GQRM 87
Q++
Sbjct: 582 RQKI 585
>sp|O19023|CEL3B_MACMU Chymotrypsin-like elastase family member 3B (Fragment) OS=Macaca
mulatta GN=CELA3B PE=2 SV=1
Length = 257
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Query: 97 VEEGGETVFPNAQGNISAVPWWNELS-ECGK----TGLSIKPKMGDALLFWSMKPDASLD 151
V+EG E V P G++ P WN L CG LS ++GDA+ S+ P +
Sbjct: 79 VKEGPEQVIPINSGDLFVHPLWNRLCVACGNDIALIKLSRSAQLGDAVQLASLPPAGDIL 138
Query: 152 PS 153
P+
Sbjct: 139 PN 140
>sp|Q973C8|SYT_SULTO Threonine--tRNA ligase OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thrS PE=3 SV=1
Length = 540
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 36 RDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLS 95
R I +R+ F+F P E GL + HY+ GQ FM+E N G Q + T +Y S
Sbjct: 136 RIIGERLDLFSF-PDETAPGLALFHYK-GQIIRKELMKFMEEINESMGYQEVFTAEIYRS 193
>sp|C0QSL9|AMPA_PERMH Probable cytosol aminopeptidase OS=Persephonella marina (strain DSM
14350 / EX-H1) GN=pepA PE=3 SV=1
Length = 497
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 123 ECGKTGLSIKPKMGDALLFWS-MKPDASLDPSSLHGGCPVIKG 164
E G T + + DAL + S +KPDA +D ++L G C V G
Sbjct: 341 EIGNTDAEGRLTLADALCYASELKPDAIIDMATLTGACVVALG 383
>sp|Q68XV9|AAT_RICTY Aspartate aminotransferase OS=Rickettsia typhi (strain ATCC VR-144
/ Wilmington) GN=aatA PE=3 SV=1
Length = 399
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Query: 47 FFPLENGEGLQVLHYEAGQKY--EPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETV 104
F N +G+ +L K+ E + DY +DE GG+++ L +++ +++G E +
Sbjct: 61 FTKYTNVDGIPLLKQAIKNKFKRENNIDYELDEIIVSTGGKQVIYNL-FMASLDKGDEVI 119
Query: 105 FPNAQGNISAVPWW 118
P VP+W
Sbjct: 120 IP--------VPYW 125
>sp|Q9ZE56|AAT_RICPR Aspartate aminotransferase OS=Rickettsia prowazekii (strain Madrid
E) GN=aatA PE=3 SV=2
Length = 399
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Query: 47 FFPLENGEGLQVLHYEAGQKY--EPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETV 104
F N +G+ +L K+ E + DY +DE GG+++ L +++ +++G E +
Sbjct: 61 FTKYTNVDGIPLLKQAIKNKFKRENNIDYELDEIIVSTGGKQVIYNL-FMASLDKGDEVI 119
Query: 105 FPNAQGNISAVPWW 118
P VP+W
Sbjct: 120 IP--------VPYW 125
>sp|Q92JE7|AAT_RICCN Aspartate aminotransferase OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=aatA PE=3 SV=1
Length = 401
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 11/74 (14%)
Query: 47 FFPLENGEGLQVLHYEAGQKY--EPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETV 104
F N EG+ +L K+ E + DY +DE GG+++ L +++ +++G E +
Sbjct: 61 FTKYTNVEGMPLLKQAIKDKFKRENNIDYELDEIIVSTGGKQVIYNL-FMASLDQGDEVI 119
Query: 105 FPNAQGNISAVPWW 118
P P+W
Sbjct: 120 IP--------APYW 125
>sp|Q9CQ52|CEL3B_MOUSE Chymotrypsin-like elastase family member 3B OS=Mus musculus
GN=Cela3b PE=2 SV=1
Length = 269
Score = 31.2 bits (69), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 97 VEEGGETVFPNAQGNISAVPWWNELS-ECGK----TGLSIKPKMGDALLFWSMKPDASLD 151
VEEG E V P G++ P WN + CG LS ++GDA+ + P +
Sbjct: 91 VEEGQEQVIPINAGDLFVHPKWNSMCVSCGNDIALVKLSRSAQLGDAVQLACLPPAGEIL 150
Query: 152 PS 153
P+
Sbjct: 151 PN 152
>sp|Q96HE7|ERO1A_HUMAN ERO1-like protein alpha OS=Homo sapiens GN=ERO1L PE=1 SV=2
Length = 468
Score = 30.8 bits (68), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 115 VPWWNELSECGKTGLSIKPKMGDAL 139
P+WN++S+CG+ ++KP D +
Sbjct: 85 CPFWNDISQCGRRDCAVKPCQSDEV 109
>sp|P08861|CEL3B_HUMAN Chymotrypsin-like elastase family member 3B OS=Homo sapiens
GN=CELA3B PE=1 SV=3
Length = 270
Score = 30.4 bits (67), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 93 YLSDVEEGGETVFPNAQGNISAVPWWNE-LSECGK----TGLSIKPKMGDALLFWSMKPD 147
Y V+EG E V P G++ P WN CG LS ++GDA+ S+ P
Sbjct: 88 YDRAVKEGPEQVIPINSGDLFVHPLWNRSCVACGNDIALIKLSRSAQLGDAVQLASLPPA 147
Query: 148 ASLDPS 153
+ P+
Sbjct: 148 GDILPN 153
>sp|B6CVD7|ERO1A_PIG ERO1-like protein alpha OS=Sus scrofa GN=ERO1L PE=2 SV=1
Length = 468
Score = 30.0 bits (66), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 8/25 (32%), Positives = 17/25 (68%)
Query: 115 VPWWNELSECGKTGLSIKPKMGDAL 139
P+WN++++CG+ ++KP D +
Sbjct: 85 CPFWNDINQCGRRDCAVKPCQSDEI 109
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,245,554
Number of Sequences: 539616
Number of extensions: 3271749
Number of successful extensions: 6485
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 6425
Number of HSP's gapped (non-prelim): 34
length of query: 180
length of database: 191,569,459
effective HSP length: 110
effective length of query: 70
effective length of database: 132,211,699
effective search space: 9254818930
effective search space used: 9254818930
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)