Query 030272
Match_columns 180
No_of_seqs 173 out of 1226
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 18:08:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030272.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030272hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jig_A Prolyl-4 hydroxylase; h 100.0 1.7E-48 5.9E-53 312.7 14.0 175 1-179 45-221 (224)
2 3itq_A Prolyl 4-hydroxylase, a 100.0 3.4E-47 1.2E-51 304.2 6.3 151 2-179 65-216 (216)
3 3dkq_A PKHD-type hydroxylase S 100.0 3.1E-29 1.1E-33 203.2 5.9 130 17-176 57-196 (243)
4 2hbt_A EGL nine homolog 1; pro 99.9 1.3E-21 4.6E-26 158.9 13.1 144 3-178 58-216 (247)
5 3kt7_A PKHD-type hydroxylase T 99.3 2.4E-11 8E-16 108.5 11.1 115 38-177 106-230 (633)
6 2rg4_A Uncharacterized protein 98.8 1.2E-08 3.9E-13 81.0 7.6 100 55-174 104-206 (216)
7 2rdq_A 1-deoxypentalenic acid 97.2 0.00075 2.6E-08 54.4 7.3 99 64-176 134-253 (288)
8 2a1x_A Phytanoyl-COA dioxygena 96.9 0.0042 1.4E-07 50.6 9.1 127 37-175 108-254 (308)
9 2fct_A Syringomycin biosynthes 96.8 0.012 4.2E-07 47.8 11.3 129 37-174 86-259 (313)
10 2opw_A Phyhd1 protein; double- 96.4 0.0068 2.3E-07 48.8 6.6 97 64-174 150-265 (291)
11 3emr_A ECTD; double stranded b 95.6 0.011 3.6E-07 48.7 4.2 102 64-174 140-267 (310)
12 3gja_A CYTC3; halogenase, beta 95.1 0.086 2.9E-06 43.4 8.5 37 128-173 221-260 (319)
13 3i3q_A Alpha-ketoglutarate-dep 92.7 1.2 4.2E-05 34.5 10.3 109 33-171 84-199 (211)
14 1w9y_A 1-aminocyclopropane-1-c 84.6 4.9 0.00017 32.8 8.6 89 55-176 156-254 (319)
15 3s57_A Alpha-ketoglutarate-dep 81.5 4.2 0.00014 31.1 6.6 116 32-171 81-199 (204)
16 2iuw_A Alkylated repair protei 80.8 2.9 0.0001 32.7 5.7 116 32-170 107-225 (238)
17 3nnf_A CURA; non-HAEM Fe(II)/a 78.9 2.3 7.8E-05 35.2 4.5 68 35-107 104-177 (344)
18 1gp6_A Leucoanthocyanidin diox 76.5 11 0.00038 31.1 8.3 88 55-176 211-308 (356)
19 1dcs_A Deacetoxycephalosporin 74.8 5.4 0.00018 32.4 5.7 91 54-176 157-268 (311)
20 3tht_A Alkylated DNA repair pr 73.9 5.8 0.0002 33.0 5.8 82 33-142 178-259 (345)
21 1odm_A Isopenicillin N synthas 69.7 12 0.00041 30.5 6.8 47 128-176 239-289 (331)
22 2wbq_A L-arginine beta-hydroxy 66.9 4.6 0.00016 33.2 3.7 43 128-178 296-342 (358)
23 2og5_A Putative oxygenase; non 66.3 4.4 0.00015 33.5 3.4 43 128-178 291-337 (357)
24 1nx8_A CARC, carbapenem syntha 63.1 6.5 0.00022 30.8 3.8 40 127-174 230-271 (273)
25 3pl0_A Uncharacterized protein 60.8 14 0.00049 29.3 5.4 72 83-178 169-250 (254)
26 3oox_A Putative 2OG-Fe(II) oxy 58.6 25 0.00086 28.3 6.6 105 38-175 145-271 (312)
27 3dqy_A Toluene 1,2-dioxygenase 58.0 18 0.00063 23.9 4.9 49 90-164 4-52 (106)
28 1ds1_A Clavaminate synthase 1; 55.6 8.3 0.00028 31.1 3.2 42 127-176 258-303 (324)
29 1otj_A Alpha-ketoglutarate-dep 54.9 11 0.00038 29.6 3.8 41 128-176 235-276 (283)
30 3o2g_A Gamma-butyrobetaine dio 53.6 6.6 0.00022 32.9 2.3 44 127-178 327-373 (388)
31 2dbn_A Hypothetical protein YB 50.3 4.7 0.00016 34.9 1.0 82 83-177 295-406 (461)
32 3on7_A Oxidoreductase, iron/as 47.0 52 0.0018 26.0 6.7 89 55-176 151-255 (280)
33 2i7f_A Ferredoxin component of 41.6 57 0.002 21.5 5.3 50 89-164 5-55 (108)
34 3pvj_A Alpha-ketoglutarate-dep 39.6 24 0.00081 27.9 3.5 37 65-107 92-128 (277)
35 3r1j_A Alpha-ketoglutarate-dep 39.4 39 0.0013 27.1 4.8 36 65-106 98-133 (301)
36 1otj_A Alpha-ketoglutarate-dep 39.1 26 0.00091 27.4 3.7 34 68-107 97-130 (283)
37 3eat_X Pyoverdine biosynthesis 37.1 28 0.00096 27.7 3.6 41 127-175 240-281 (293)
38 2pp6_A Gifsy-2 prophage ATP-bi 37.0 31 0.0011 23.5 3.2 25 131-176 62-86 (102)
39 3gce_A Ferredoxin component of 36.3 34 0.0012 23.3 3.5 51 88-164 11-61 (121)
40 1oih_A Putative alkylsulfatase 35.8 31 0.0011 27.3 3.6 37 65-107 103-139 (301)
41 1vm9_A Toluene-4-monooxygenase 34.3 49 0.0017 21.9 4.0 27 130-165 29-55 (111)
42 1oih_A Putative alkylsulfatase 32.5 32 0.0011 27.2 3.2 41 127-175 243-284 (301)
43 4aiv_A Probable nitrite reduct 30.4 90 0.0031 21.2 4.9 55 85-164 7-62 (119)
44 2qpz_A Naphthalene 1,2-dioxyge 30.3 69 0.0023 20.8 4.2 23 134-165 33-55 (103)
45 1fqt_A Rieske-type ferredoxin 29.6 58 0.002 21.6 3.8 50 89-164 7-56 (112)
46 2q4a_A Clavaminate synthase-li 28.6 23 0.00079 28.4 1.7 34 128-170 293-326 (330)
47 2q4a_A Clavaminate synthase-li 27.7 29 0.001 27.8 2.2 38 64-107 114-151 (330)
48 2de6_D Ferredoxin component of 26.3 64 0.0022 21.6 3.5 21 135-164 36-56 (115)
49 1nx8_A CARC, carbapenem syntha 25.3 35 0.0012 26.5 2.2 36 66-107 97-134 (273)
50 3azc_A Cytochrome B6-F complex 30.6 16 0.00053 26.0 0.0 56 85-164 14-71 (133)
51 1is3_A Congerin II; complex wi 23.4 76 0.0026 22.2 3.5 44 137-180 56-99 (135)
52 1g86_A Charcot-leyden crystal 23.2 54 0.0018 23.1 2.7 51 129-180 52-102 (142)
53 3o2g_A Gamma-butyrobetaine dio 21.2 56 0.0019 27.1 2.8 34 68-107 201-234 (388)
54 1rie_A Rieske iron-sulfur prot 20.8 63 0.0022 22.3 2.6 21 135-164 62-82 (129)
55 2wbq_A L-arginine beta-hydroxy 20.3 66 0.0022 26.1 3.0 36 66-108 164-199 (358)
No 1
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=100.00 E-value=1.7e-48 Score=312.69 Aligned_cols=175 Identities=61% Similarity=1.039 Sum_probs=157.0
Q ss_pred CcceEEEeCCCCCccccCcEeeeeeeecCCCCHHHHHHHHHHHHhcCCCCCCCCccEEEEcCCCCccCCCCCcccccccc
Q 030272 1 MRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNT 80 (180)
Q Consensus 1 ~~~s~v~~~~~~~~~~~~~Rts~~~~l~~~~~~~~~~l~~Ri~~~~~~~~~~~E~lqv~~Y~~G~~y~~H~D~~~~~~~~ 80 (180)
|++|+|++..++....+.+|+|.++||+..+++++++|.+||.+++++|....|++||++|++|++|++|+|++....+.
T Consensus 45 ~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~~~~~~~i~~ri~~~~gl~~~~~e~~qv~rY~~G~~y~~H~D~~~~~~~~ 124 (224)
T 2jig_A 45 MVKSSVVDNESGKSVDSEIRTSTGTWFAKGEDSVISKIEKRVAQVTMIPLENHEGLQVLHYHDGQKYEPHYDYFHDPVNA 124 (224)
T ss_dssp CEECEEEETTTTEEEECSSBCSEEEECCTTCSHHHHHHHHHHHHHHTCCGGGBCCCEEEEEETTCCEEEECCSSCCTTSS
T ss_pred CeeeeeecCCCCcccccCCEEEeeeEecCCCCHHHHHHHHHHHHHhCCCcccccceEEEecCCCccccCcccCCCCcccc
Confidence 46889988766777788899999999998778999999999999999999999999999999999999999998653211
Q ss_pred --CCCCceeEEEEEeecCCCCCcceecCCCCCCCCCCccccccccccCcCeeEecceeeEEEEeecCCCCCCCCCCcccC
Q 030272 81 --KNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGG 158 (180)
Q Consensus 81 --~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g 158 (180)
..+++|++|+|+||||+++||||+||.+.. .+.++.+++|.+.+++|+|++|+||||+|+.+||.+|++++|+|
T Consensus 125 ~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~----~~~~~~~~~c~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~ 200 (224)
T 2jig_A 125 GPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQ----KVTGDGWSECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGS 200 (224)
T ss_dssp SCCCCSCEEEEEEEECSCCSEECCEEETTSSS----CCCSTTSCTTGGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEE
T ss_pred ccccCCCeEEEEEEEecCCCCCCceeCCCccc----ccccccccccccCceEEecccCcEEEEEeeCCCCCCCCCCcccC
Confidence 346899999999999999999999998742 24567788998889999999999999999999999999999999
Q ss_pred CCCCcCeEEEEEEeeeecccc
Q 030272 159 CPVIKGNKWSSTKWIRVNEYK 179 (180)
Q Consensus 159 ~pV~~G~K~~~~~W~~~~~~~ 179 (180)
|||++|+||++++||+.++|+
T Consensus 201 ~PV~~G~K~~~~~Wi~~~~~~ 221 (224)
T 2jig_A 201 CPTLKGDKWSATKWIHVAPIG 221 (224)
T ss_dssp CCEEESEEEEEEEEEESSCCC
T ss_pred CccccceEEEEEEeEEcCCcC
Confidence 999999999999999999985
No 2
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=100.00 E-value=3.4e-47 Score=304.21 Aligned_cols=151 Identities=44% Similarity=0.821 Sum_probs=133.3
Q ss_pred cceEE-EeCCCCCccccCcEeeeeeeecCCCCHHHHHHHHHHHHhcCCCCCCCCccEEEEcCCCCccCCCCCcccccccc
Q 030272 2 RKSTV-VDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNT 80 (180)
Q Consensus 2 ~~s~v-~~~~~~~~~~~~~Rts~~~~l~~~~~~~~~~l~~Ri~~~~~~~~~~~E~lqv~~Y~~G~~y~~H~D~~~~~~~~ 80 (180)
++|+| ++ ...+++|+|+++||+. ++++++|.+||.+++|++..+.|.+||++|++|++|++|+|++.... .
T Consensus 65 ~~s~v~~~-----~~~~~~RtS~~~wl~~--~~~v~~i~~Ri~~~~gl~~~~~E~lqv~~Y~~G~~y~~H~D~~~~~~-~ 136 (216)
T 3itq_A 65 ARSKVGSS-----RDVNDIRTSSGAFLDD--NELTAKIEKRISSIMNVPASHGEGLHILNYEVDQQYKAHYDYFAEHS-R 136 (216)
T ss_dssp C-------------CCCCGGGTTCEECCC--CHHHHHHHHHHHHHHTSCGGGBCCCEEEEECBTCCEEEECSSCCTTS-G
T ss_pred ccceeccC-----CccCCcEeeeeEEeCC--cHHHHHHHHHHHHhcCceeccccceeEEEeCCCCccccccCCCcCCC-c
Confidence 56777 32 3457899999999987 89999999999999999999999999999999999999999986532 1
Q ss_pred CCCCceeEEEEEeecCCCCCcceecCCCCCCCCCCccccccccccCcCeeEecceeeEEEEeecCCCCCCCCCCcccCCC
Q 030272 81 KNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCP 160 (180)
Q Consensus 81 ~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~p 160 (180)
...++|++|+++||||+++||||+||.+ +++|+|++|+||+|+|+++||.+|++++|+|||
T Consensus 137 ~~~~~R~~T~l~YLnd~~~GGeT~Fp~~-------------------~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~P 197 (216)
T 3itq_A 137 SAANNRISTLVMYLNDVEEGGETFFPKL-------------------NLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAP 197 (216)
T ss_dssp GGGGCEEEEEEEECSCCSEECCEEETTT-------------------TEEECCCTTCEEEEECCCSSHHHHHTTCEEECC
T ss_pred ccCCceEEEEEEecccCCcCceeEecCC-------------------CCEEecCCCeEEEEeccCCCCCCCCccccccce
Confidence 2358999999999999999999999975 799999999999999999999999999999999
Q ss_pred CCcCeEEEEEEeeeecccc
Q 030272 161 VIKGNKWSSTKWIRVNEYK 179 (180)
Q Consensus 161 V~~G~K~~~~~W~~~~~~~ 179 (180)
|++|+||++|+|||.++|+
T Consensus 198 V~~G~K~v~~~W~~~~~~~ 216 (216)
T 3itq_A 198 VTKGEKWIATQWVRRGTYK 216 (216)
T ss_dssp EEESCEEEEEEEEESSCCC
T ss_pred eccccEEEEEeeEecCCcC
Confidence 9999999999999999996
No 3
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=99.95 E-value=3.1e-29 Score=203.24 Aligned_cols=130 Identities=22% Similarity=0.282 Sum_probs=105.0
Q ss_pred cCcEeeeeeeecCCCCHHHHHHHHHHHHhcCCC--------CCCCCccEEEEcCCCCccCCCCCccccccccCCCCceeE
Q 030272 17 SRVRTSSGTFLARGRDKIIRDIEKRIADFTFFP--------LENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMA 88 (180)
Q Consensus 17 ~~~Rts~~~~l~~~~~~~~~~l~~Ri~~~~~~~--------~~~~E~lqv~~Y~~G~~y~~H~D~~~~~~~~~~~~~R~~ 88 (180)
..+|.+ .+|.. ++++++.|.+||.++++.. ....|++|+++|++|++|++|+|.+...... ...+|.+
T Consensus 57 ~~vr~n--~~l~~-d~~~~~~l~~~i~~~l~~~~~f~~~~L~~~~e~~~~~rY~~G~~y~~H~D~~~~~~~~-~~~~r~~ 132 (243)
T 3dkq_A 57 TTRKRN--QQLDK-DDPVAVALGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGETFGYHIDNAIRSTPD-GMIRTDL 132 (243)
T ss_dssp CCCEEE--EECCT-TCHHHHHHHHHHHHHHHTCHHHHHHHCEEEEEEEEEEEECTTCEEEEECBCSEEEETT-EEEECCE
T ss_pred ccceee--eEECC-CCHHHHHHHHHHHHHHccCcchhhcccccccccceEEEECCCCeeccCCCCCCCCCCC-ccccceE
Confidence 345555 45553 4689999999999887654 1346789999999999999999998653110 0236899
Q ss_pred EEEEeecC--CCCCcceecCCCCCCCCCCccccccccccCcCeeEecceeeEEEEeecCCCCCCCCCCcccCCCCCcCeE
Q 030272 89 TVLMYLSD--VEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNK 166 (180)
Q Consensus 89 T~l~YLnd--~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~G~K 166 (180)
|+++|||| +++||||+||... ....|+|++|+||+|++ .++|+||||++|+|
T Consensus 133 T~~lYLndp~~~~GGetvf~~~~-----------------~~~~V~P~~G~~v~F~s---------~~lH~v~pV~~G~R 186 (243)
T 3dkq_A 133 SATLFLSEPENYQGGELVIQDTY-----------------GQQSIKLSAGSLVLYPS---------SSLHQVTPVLSGER 186 (243)
T ss_dssp EEEEECSCGGGEEECCEEEEETT-----------------EEEEECCCTTCEEEEET---------TSEEEECCEEEECE
T ss_pred EEEEEeCCCCCCCCceEEEeeCC-----------------CcEEEecCCCEEEEECC---------CCeEcCccccccCE
Confidence 99999999 6699999999752 25789999999999987 68999999999999
Q ss_pred EEEEEeeeec
Q 030272 167 WSSTKWIRVN 176 (180)
Q Consensus 167 ~~~~~W~~~~ 176 (180)
|+++.||+..
T Consensus 187 ~~~~~Wi~s~ 196 (243)
T 3dkq_A 187 TAAFMWLQSM 196 (243)
T ss_dssp EEEEEEEEES
T ss_pred EEEEEehhhc
Confidence 9999999953
No 4
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=99.87 E-value=1.3e-21 Score=158.85 Aligned_cols=144 Identities=20% Similarity=0.291 Sum_probs=101.2
Q ss_pred ceEEEeCCCCCccccCcEeeeeeeecCCCC--H----HHHHHHHHHHHhcC-CCCC---CCCccEEEEcCC-CCccCCCC
Q 030272 3 KSTVVDSDTGKSKDSRVRTSSGTFLARGRD--K----IIRDIEKRIADFTF-FPLE---NGEGLQVLHYEA-GQKYEPHF 71 (180)
Q Consensus 3 ~s~v~~~~~~~~~~~~~Rts~~~~l~~~~~--~----~~~~l~~Ri~~~~~-~~~~---~~E~lqv~~Y~~-G~~y~~H~ 71 (180)
++.+... .......+|++..+|++..+. + +.+.+.+.+..+.. +... ..+.+|+++|.+ |++|.+|.
T Consensus 58 ~a~i~~~--~~~~~~~iR~d~i~wl~~~~~~~~~~~~l~~~i~~l~~~ln~~lGl~~i~~~~e~~~~~Y~~~G~~y~~H~ 135 (247)
T 2hbt_A 58 DGQLVSQ--KSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHV 135 (247)
T ss_dssp SCCEEEC--CSSSTTCEECCEEEEECSCSTTCHHHHHHHHHHHHHHHHTTTTSTTCCEEEECCEEEEEECSSSCCEEEEC
T ss_pred ccccccc--cccccccccccceeeecccccchhHHHHHHHHHHHHHHHHhhhcCcccccccceEEEEEecCCCCcccccc
Confidence 4455442 233567899999999997432 2 23333333322222 1222 125689999997 99999999
Q ss_pred CccccccccCCCCceeEEEEEeecCC----CCCcceecCCCCCCCCCCccccccccccCcCeeEecceeeEEEEeecCCC
Q 030272 72 DYFMDEFNTKNGGQRMATVLMYLSDV----EEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPD 147 (180)
Q Consensus 72 D~~~~~~~~~~~~~R~~T~l~YLnd~----~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~v~P~~G~al~f~n~~~~ 147 (180)
|... ..+|.+|+++|||+. +.||+|.|..... .....|.|+.|++|+|.+
T Consensus 136 D~~~-------~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~---------------~~~~~v~P~~grlv~F~s---- 189 (247)
T 2hbt_A 136 DNPN-------GDGRCVTCIYYLNKDWDAKVSGGILRIFPEGK---------------AQFADIEPKFDRLLFFWS---- 189 (247)
T ss_dssp SSCS-------CCSEEEEEEEECBTTCCHHHHBCCEEECCTTC---------------SSCEEECCBTTEEEEEEC----
T ss_pred cCCC-------CCCceEEEEEEeCCCCCCCCCceeEEEecCCC---------------CceEEEEcCCCEEEEEec----
Confidence 9831 358999999999994 5699997643211 024789999999999987
Q ss_pred CCCCCCCcccCCCCCcCeEEEEEEeeeeccc
Q 030272 148 ASLDPSSLHGGCPVIKGNKWSSTKWIRVNEY 178 (180)
Q Consensus 148 g~~d~~~~H~g~pV~~G~K~~~~~W~~~~~~ 178 (180)
+.+++|+++|+ .|+||+++.||+..+.
T Consensus 190 ---~~~~~H~V~p~-~~~R~sit~W~~~~~~ 216 (247)
T 2hbt_A 190 ---DRRNPHEVQPA-YATRYAITVWYFDADE 216 (247)
T ss_dssp ---STTCCEEECCB-SSCEEEEEEEEEEHHH
T ss_pred ---CCCceeeeccC-CCEEEEEEEEEcCCch
Confidence 23489999995 6899999999998764
No 5
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=99.27 E-value=2.4e-11 Score=108.45 Aligned_cols=115 Identities=19% Similarity=0.239 Sum_probs=85.0
Q ss_pred HHHHHHHhcCC-CCC-CCCccEEEEcCCCCccCCCCCccccccccCCCCceeEEEEEeecCC------CCCcceecCCCC
Q 030272 38 IEKRIADFTFF-PLE-NGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDV------EEGGETVFPNAQ 109 (180)
Q Consensus 38 l~~Ri~~~~~~-~~~-~~E~lqv~~Y~~G~~y~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~------~~GGeT~Fp~~~ 109 (180)
+..-|.+++|+ ++. ..-++++.+|.+|.+|.+|.|.+ +.|.+|+++|||+. +.||++.+....
T Consensus 106 Fr~~Ls~iTGi~~Lsg~~~D~~~a~Y~~G~fL~~H~D~~---------~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d 176 (633)
T 3kt7_A 106 YRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVI---------GSRRISFILYLPDPDRKWKSHYGGGLRLFPSI 176 (633)
T ss_dssp HHHHHHHHHTCCCCCSSCCCEEEEEECTTCEEEEECCCC---------TTEEEEEEEECSCTTSCCCGGGBCCEEECCEE
T ss_pred HHHHHHHHhCCcccCCCceeEEEEEeCCCCeeeecCCCC---------CCeEEEEEEEcCCCCCCCCccCCceEEEecCC
Confidence 44555677887 442 22358999999999999999953 34999999999984 369999986532
Q ss_pred CCCCCCccccccccccCcCeeEecceeeEEEEeecCCCCCCCC-CCcccCCCCC-cCeEEEEEEeeeecc
Q 030272 110 GNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDP-SSLHGGCPVI-KGNKWSSTKWIRVNE 177 (180)
Q Consensus 110 ~~~~~~~~~~~~~~c~~~~~~v~P~~G~al~f~n~~~~g~~d~-~~~H~g~pV~-~G~K~~~~~W~~~~~ 177 (180)
... .... .....|.|+-|++|||.+ .+ .++|++.||. ...|++++.|||.+.
T Consensus 177 ~~~------~P~~---d~~~~I~P~fNrLV~F~v-------sp~~S~H~V~eV~~~~~RlSItGWF~~p~ 230 (633)
T 3kt7_A 177 LPN------VPHS---DPSAKLVPQFNQIAFFKV-------LPGFSFHDXEEVKVDKHRLSIQGWYHIPQ 230 (633)
T ss_dssp ETT------EECS---SCSEEECCCTTEEEEEEC-------CTTTCCEEECCBCSSCCEEEEEEEEECCC
T ss_pred CcC------CCCC---CceEEEecCCCeEEEEEc-------CCCCCcCCCCccCCCCCEEEEEEEeccCC
Confidence 100 0000 124689999999999986 22 7999999998 448999999999763
No 6
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=98.79 E-value=1.2e-08 Score=80.96 Aligned_cols=100 Identities=18% Similarity=0.104 Sum_probs=69.2
Q ss_pred ccEEEEcCCCCccCCCCCccccccccCCCCceeEEEEEeecCCCCCcceecCCCCCCCC-CCccccc-cccccCcCeeEe
Q 030272 55 GLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNIS-AVPWWNE-LSECGKTGLSIK 132 (180)
Q Consensus 55 ~lqv~~Y~~G~~y~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~-~~~~~~~-~~~c~~~~~~v~ 132 (180)
..-+.+|.+|++|.+|.+ .++.+|.++|||.++.||++.|..-..... ..+.... ...-...-..|+
T Consensus 104 ~~W~~~~~~G~~~~~H~H-----------~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~ 172 (216)
T 2rg4_A 104 DIWINILPEGGVHGSHIH-----------PHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVA 172 (216)
T ss_dssp EEEEEEECTTCCEEEECC-----------TTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEEC
T ss_pred eEEEEEcCCCCcccCccC-----------CCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEec
Confidence 356789999999999987 257899999999999999999954211000 0000000 000000124899
Q ss_pred cceeeEEEEeecCCCCCCCCCCcccCCCCCc-CeEEEEEEeee
Q 030272 133 PKMGDALLFWSMKPDASLDPSSLHGGCPVIK-GNKWSSTKWIR 174 (180)
Q Consensus 133 P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~-G~K~~~~~W~~ 174 (180)
|+.|++|||++ ...|++.|... ++|+++.--+.
T Consensus 173 P~~G~lvlFpS---------~l~H~V~p~~~~~~RiSIsFN~~ 206 (216)
T 2rg4_A 173 PKVGDVLLWES---------WLRHEVPMNMAEEDRISVSFNYA 206 (216)
T ss_dssp CCTTEEEEEET---------TSCEEECCCCSSSCEEEEEEEEE
T ss_pred CCCCeEEEECC---------CCEEeccCCCCCCCEEEEEEEee
Confidence 99999999997 79999999875 57888765443
No 7
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=97.24 E-value=0.00075 Score=54.41 Aligned_cols=99 Identities=19% Similarity=0.126 Sum_probs=63.2
Q ss_pred CCccCCCCCccccccccCCCCceeEEEEEeecCCC-CCcceec-CCCCCCCCCCcccc-----------c-c-cc-c-cC
Q 030272 64 GQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE-EGGETVF-PNAQGNISAVPWWN-----------E-L-SE-C-GK 126 (180)
Q Consensus 64 G~~y~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~-~GGeT~F-p~~~~~~~~~~~~~-----------~-~-~~-c-~~ 126 (180)
|....||.|..... ...+.+|+.|+|.|+. +.|.|.| |...........+. . . .+ . ..
T Consensus 134 g~~~~wHqD~~~~~-----~~~~~v~~wiaL~d~~~enG~l~vvPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (288)
T 2rdq_A 134 HYLTPFHQDGFYIG-----PNQDFRTFWIPLIRTTRESGGVALADGSHRRGKRDHVLNESFRRFGHPVRGIPPTEVSEDE 208 (288)
T ss_dssp TTSCCSBCHHHHSC-----SCCCCEEEEEESSCCCTTTCEEEEETTTTSSCCCCCEEEEEEEETTEEEEECCGGGSCTTS
T ss_pred CCCcCccccccccC-----CCCCeEEEEEECCCCCccCCcEEEEeCCccccccccccchhhhccCcccccCCCccccccC
Confidence 44678999985321 3457899999999985 5677766 65432110000000 0 0 00 0 01
Q ss_pred cCeeEecceeeEEEEeecCCCCCCCCCCcccCCCCCcC----eEEEEEEeeeec
Q 030272 127 TGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG----NKWSSTKWIRVN 176 (180)
Q Consensus 127 ~~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~G----~K~~~~~W~~~~ 176 (180)
..+.+.-++|++|||.. .++|++.|..+. .+|++..|+...
T Consensus 209 ~~v~~~~~aGdv~lf~~---------~~~H~s~~N~s~~~R~~R~s~~~~~~~~ 253 (288)
T 2rdq_A 209 HLLHSPMEPGDILLFHA---------HMCHKSIPNLSKDPRLMRMSMDTRVQPA 253 (288)
T ss_dssp CEECCCCCTTCEEEEET---------TCCEEEECCCCCTTCCCEEEEEEEEEET
T ss_pred ceeecccCCCCEEEEeC---------CceecCCCCCCCCccceEEEEEEEEecC
Confidence 23567779999999975 899999999876 378888887654
No 8
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=96.94 E-value=0.0042 Score=50.63 Aligned_cols=127 Identities=16% Similarity=0.194 Sum_probs=69.9
Q ss_pred HHHHHHHHhcCCCCCCCCccEEEEcCC-CCc---cCCCCCccccccccCCCCceeEEEEEeecCCC-CCcceec-CCCCC
Q 030272 37 DIEKRIADFTFFPLENGEGLQVLHYEA-GQK---YEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE-EGGETVF-PNAQG 110 (180)
Q Consensus 37 ~l~~Ri~~~~~~~~~~~E~lqv~~Y~~-G~~---y~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~-~GGeT~F-p~~~~ 110 (180)
.|.+.+++++|-+.......-+.+..- |+. ..+|.|...-. .....+.+|+.++|.|+. +.|.|.| |....
T Consensus 108 ~l~~~~~~llG~~~~~~~~~~~~k~P~~g~~~~~~~wHqD~~~~~---~~p~~~~v~~wiaL~D~~~enG~l~~vPGSH~ 184 (308)
T 2a1x_A 108 EILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFP---FRPSDLIVCAWTAMEHISRNNGCLVVLPGTHK 184 (308)
T ss_dssp HHHHHHHHHHCSSEEEEEEEEEEECCC--------CCBCGGGGCC---EECGGGEEEEEEESSCBCTTBTCEEECTTGGG
T ss_pred HHHHHHHHhcCCCcceecceEEEcCCCCCCCccCCCCccCCcccc---CCCCCCeEEEEEEeeccCCCCCcEEEEcCCCC
Confidence 355556667773322111122233322 322 47999974311 011247899999999975 5677776 64432
Q ss_pred CCC-C--Cccccc--------cccc--cCcCeeEecceeeEEEEeecCCCCCCCCCCcccCCCCCc-CeEEEEEEeeee
Q 030272 111 NIS-A--VPWWNE--------LSEC--GKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK-GNKWSSTKWIRV 175 (180)
Q Consensus 111 ~~~-~--~~~~~~--------~~~c--~~~~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~-G~K~~~~~W~~~ 175 (180)
... . ...|.. ..+. ....+.+.-++|++|||.. .++|++.|... ..|++++.-+..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~aGd~vlf~~---------~~~H~s~~N~s~~~R~~~~~~y~~ 254 (308)
T 2a1x_A 185 GSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHP---------LLIHGSGQNKTQGFRKAISCHFAS 254 (308)
T ss_dssp SCCCCCCC-----------CCCCC-CCCSCCEEECBCTTCEEEECT---------TCCEEECCBCSSSCEEEEEEEEEE
T ss_pred CccccccccccccCccccccCCccccccCCeEEccCCCccEEEECC---------CccccCCCCCCCCceEEEEEEEEC
Confidence 110 0 001110 0111 1235778889999999964 89999999876 478888776554
No 9
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=96.85 E-value=0.012 Score=47.83 Aligned_cols=129 Identities=15% Similarity=0.182 Sum_probs=71.5
Q ss_pred HHHHHHHHhcCCCCCCCCccEEEEcCCCCccCCCCCcccccccc------CCCCc--eeEEEEEeecCCC-CCcceec-C
Q 030272 37 DIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNT------KNGGQ--RMATVLMYLSDVE-EGGETVF-P 106 (180)
Q Consensus 37 ~l~~Ri~~~~~~~~~~~E~lqv~~Y~~G~~y~~H~D~~~~~~~~------~~~~~--R~~T~l~YLnd~~-~GGeT~F-p 106 (180)
.|...+++++|-+.......-+.+...++...||.|...-.... ..... +.+|+.++|.|+. +.|.|.| |
T Consensus 86 ~l~~~~~~llG~~~~~~~~~~~~k~Pg~~~~~wHqD~~~~~~~g~p~~~~p~~~~~~~~l~~wiaL~D~~~enG~l~~vP 165 (313)
T 2fct_A 86 EICDRVESILGPNVLCWRTEFFPKYPGDEGTDWHQADTFANASGKPQIIWPENEEFGGTITVWTAFTDANIANGCLQFIP 165 (313)
T ss_dssp HHHHHHHHHHCSCEEEEEEEEEEECTTCCEECCBCCSSSCTTTSSCSEECCTTSCCCSCEEEEEESSCBCTTBTCEEEET
T ss_pred HHHHHHHHHcCCCeEeeeeeEEEeCCCCCCCCccccccccccCCCccccccccccccCeEEEEEEeccCCccCCCEEEEc
Confidence 45555666777332111122233433334468999974311000 00011 6899999999985 5677776 6
Q ss_pred CCCCCCC--CCc--cc---------c-----c--------ccc------ccCcCeeEecceeeEEEEeecCCCCCCCCCC
Q 030272 107 NAQGNIS--AVP--WW---------N-----E--------LSE------CGKTGLSIKPKMGDALLFWSMKPDASLDPSS 154 (180)
Q Consensus 107 ~~~~~~~--~~~--~~---------~-----~--------~~~------c~~~~~~v~P~~G~al~f~n~~~~g~~d~~~ 154 (180)
....... ... .+ . . +.. -...-+.+.-++|++|||.. .+
T Consensus 166 GSH~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~aGd~v~f~~---------~l 236 (313)
T 2fct_A 166 GTQNSMNYDETKRMTYEPDANNSVVKDGVRRGFFGYDYRQLQIDENWKPDEASAVPMQMKAGQFIIFWS---------TL 236 (313)
T ss_dssp TCTTSCCBCTTSCCCCCTTTCSSCEETTEEEEBTTBCGGGGBSSTTCCCCGGGCEEECBCTTEEEEEET---------TS
T ss_pred CCCcCCccccccccccChhhhhhhhhccccccccccchhhhccccccCCccCceeEeeeCCceEEEEeC---------Cc
Confidence 5432110 000 00 0 0 000 01235788999999999975 89
Q ss_pred cccCCCCC--cC-eEEEEEEeee
Q 030272 155 LHGGCPVI--KG-NKWSSTKWIR 174 (180)
Q Consensus 155 ~H~g~pV~--~G-~K~~~~~W~~ 174 (180)
+|++.|.. .. .|+++..-+.
T Consensus 237 ~H~s~~N~~ss~~~R~a~~~~y~ 259 (313)
T 2fct_A 237 MHASYPHSGESQEMRMGFASRYV 259 (313)
T ss_dssp EEEECCBCSSSSSCEEEEEEEEE
T ss_pred eeeCCCCCCCCCCceEEEEEEEE
Confidence 99999998 44 6877765443
No 10
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=96.38 E-value=0.0068 Score=48.81 Aligned_cols=97 Identities=16% Similarity=0.162 Sum_probs=60.6
Q ss_pred CCccCCCCCccccccccCCCCceeEEEEEeecCCC-CCcceec-CCCCCCCCC-----C-----cc--cc----cccccc
Q 030272 64 GQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE-EGGETVF-PNAQGNISA-----V-----PW--WN----ELSECG 125 (180)
Q Consensus 64 G~~y~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~-~GGeT~F-p~~~~~~~~-----~-----~~--~~----~~~~c~ 125 (180)
|+...+|.|...-. .....+.+|+.++|.|+. +.|.|.| |........ . +. .. .+. .
T Consensus 150 ~~~~~wHqD~~~~~---~~p~~~~~~~wi~L~d~~~~nG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 224 (291)
T 2opw_A 150 GGEVSPHQDASFLY---TEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSFLGSEPARD--N 224 (291)
T ss_dssp BCCEEEECGGGTSC---EESSSCEEEEEEESSCBCTTTTCEEEETTCSSSCCSEEEEECC----CCEEEEECCCCCC--G
T ss_pred CCCcCCeeCCcccc---cCCCCceEEEEEEcccCCCCCCCEEEECCccCCCcccccccCCCCCCCcceeeccccCCC--c
Confidence 35578999975321 111237899999999985 5677776 654321100 0 00 00 000 1
Q ss_pred CcCeeEecceeeEEEEeecCCCCCCCCCCcccCCCCCcC-eEEEEEEeee
Q 030272 126 KTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG-NKWSSTKWIR 174 (180)
Q Consensus 126 ~~~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~G-~K~~~~~W~~ 174 (180)
...+.+.-++|++|||.. .++|++.|..+. .|++++.-+.
T Consensus 225 ~~~v~~~~~aGd~~~f~~---------~~~H~s~~N~s~~~R~~~~~~~~ 265 (291)
T 2opw_A 225 SLFVPTPVQRGALVLIHG---------EVVHKSKQNLSDRSRQAYTFHLM 265 (291)
T ss_dssp GGCEEECBCTTCEEEEET---------TCEEEECCBCSSSCCCEEEEEEE
T ss_pred CCeeecccCCCcEEEEcC---------CceecCCCCCCCCceEEEEEEEE
Confidence 135778899999999975 899999998865 5776655443
No 11
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=95.55 E-value=0.011 Score=48.74 Aligned_cols=102 Identities=20% Similarity=0.184 Sum_probs=58.4
Q ss_pred CCccCCCCCccccccccCCCCceeEEEEEeecCCC-CCcceec-CCCCCCC----CC--Cccccc-c-------cc----
Q 030272 64 GQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE-EGGETVF-PNAQGNI----SA--VPWWNE-L-------SE---- 123 (180)
Q Consensus 64 G~~y~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~-~GGeT~F-p~~~~~~----~~--~~~~~~-~-------~~---- 123 (180)
|....+|.|...-.........+.+|+.++|.|+. +.|.|.| |...... .. ...|.. + .+
T Consensus 140 g~~~~wHqD~~~~~~~~g~P~~~~v~~wiaL~D~t~enG~l~viPGSH~~~~~~~g~~p~~~~~~~l~~~~~g~p~~~~~ 219 (310)
T 3emr_A 140 GKEFDWHSDFETWHVEDGMPRMRAISVSIALSDNYSFNGPLMLIPGSHNYFVSCVGETPDNNYKESLKKQKLGVPDEESL 219 (310)
T ss_dssp CCCEEEECHHHHHHHHHCCCSSCEEEEEEESSCBCSSSCCCEECTTGGGEEEECCC-----------------CCCHHHH
T ss_pred CCCCCcCCCCccccccCCCcccceEEEEEEecCCCCcCCCEEEEeCCCCCcccccccccccccccccccccccCCCHHHH
Confidence 56788999964211000112257899999999985 5566666 5432110 00 000000 0 00
Q ss_pred ---ccC-c-CeeEecceeeEEEEeecCCCCCCCCCCcccCCCCCcC-eEEEEEEeee
Q 030272 124 ---CGK-T-GLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG-NKWSSTKWIR 174 (180)
Q Consensus 124 ---c~~-~-~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~G-~K~~~~~W~~ 174 (180)
..+ . -+.+.-++|++|||.. .++|++.|..+. .|+++..=+.
T Consensus 220 ~~~~~~~~~~v~~~~~aGdvl~f~~---------~~~H~s~~N~S~~~R~~l~~~y~ 267 (310)
T 3emr_A 220 RELTRIGGGISVPTGKAGSVTLFES---------NTMHGSTSNITPYPRNNLFMVYN 267 (310)
T ss_dssp HHHHHHHTSCBCCCBSTTCEEEEET---------TCCEEECCCCSSCCCCEEEEEEE
T ss_pred HHHHhccCceEEeeeCCceEEEEeC---------CceecCCCCCCCCCeEEEEEEEe
Confidence 000 1 3567778999999975 899999998765 5776655443
No 12
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=95.15 E-value=0.086 Score=43.37 Aligned_cols=37 Identities=24% Similarity=0.482 Sum_probs=29.4
Q ss_pred CeeEecceeeEEEEeecCCCCCCCCCCcccCCCCC--cC-eEEEEEEee
Q 030272 128 GLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVI--KG-NKWSSTKWI 173 (180)
Q Consensus 128 ~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~--~G-~K~~~~~W~ 173 (180)
-+.+.-++|++|||.. .++|++.|.. +. .|+++..-+
T Consensus 221 ~v~~~~~aGd~v~f~~---------~~~H~s~~N~~ts~~~R~a~~~~y 260 (319)
T 3gja_A 221 AYPMVLKPGEAVIFWS---------NTMHASLPHTGSKTDYRMGFAARY 260 (319)
T ss_dssp CCBCCBCTTEEEEEET---------TSCEEECCCCSCTTCCEEEEEEEE
T ss_pred eeEeeECCCeEEEEcC---------CccccCCCCCCCCCCcEEEEEEEE
Confidence 4667788999999975 8999999998 55 677776544
No 13
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=92.72 E-value=1.2 Score=34.46 Aligned_cols=109 Identities=16% Similarity=0.146 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCccEEEEcCCCCccCCCCCccccccccCCCCceeEEEEEeecCCCCCcceecCCCCCCC
Q 030272 33 KIIRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNI 112 (180)
Q Consensus 33 ~~~~~l~~Ri~~~~~~~~~~~E~lqv~~Y~~G~~y~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~ 112 (180)
+.+..|.+|+...++++....+..-|..|.+|+.-.+|.|..... -+..++|+-+ |+...|-.-....
T Consensus 84 ~~L~~l~~~~~~~~g~~~~~pn~~LvN~Y~~G~~i~~H~D~~e~~-----~~~pI~svSL-------G~~~~f~f~~~~~ 151 (211)
T 3i3q_A 84 QSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPD-----LRAPIVSVSL-------GLPAIFQFGGLKR 151 (211)
T ss_dssp HHHHHHHHHHHHHTTCTTCCCCEEEEEEECTTCCEEEECCCCCSC-----TTSCEEEEEE-------ESCEEEEECCSST
T ss_pred HHHHHHHHHHHHhcCCCCcCCCEEEEEEEcCCCCcccccCCCccc-----cCCCEEEEEC-------CCCeEEEEecccC
Confidence 378888999988777643333567788899999999999952211 1244666553 6666664321100
Q ss_pred CCCccccccccccCcCeeEecceeeEEEEeecCCCCCCCCCCcccCCCCCc-------CeEEEEEE
Q 030272 113 SAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK-------GNKWSSTK 171 (180)
Q Consensus 113 ~~~~~~~~~~~c~~~~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~-------G~K~~~~~ 171 (180)
+ +..+.|.-..|++|++.. ..- ...|+..++.. +.++.+|-
T Consensus 152 ~------------~~~~~i~L~~GsllvM~G-----~~r-~~~H~I~~~~~~~~p~~~~~RIsLTF 199 (211)
T 3i3q_A 152 N------------DPLKRLLLEHGDVVVWGG-----ESR-LFYHGIQPLKAGFHPLTIDCRYNLTF 199 (211)
T ss_dssp T------------SCCEEEEECTTCEEEECG-----GGT-TCCEEECCCCCCCBTTTBTCEEEEEE
T ss_pred C------------CceEEEECCCCCEEEECc-----hHH-ceEeccCcccCCcCCCCCCCEEEEEe
Confidence 0 124789999999999953 222 25788888876 34777663
No 14
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=84.59 E-value=4.9 Score=32.82 Aligned_cols=89 Identities=15% Similarity=0.159 Sum_probs=56.3
Q ss_pred ccEEEEcCCCC------ccCCCCCccccccccCCCCceeEEEEEeecCCCCCcceecCCCCCCCCCCccccccccccCcC
Q 030272 55 GLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 128 (180)
Q Consensus 55 ~lqv~~Y~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 128 (180)
.+++.+|.+.. -..+|.|.. .+|+|+. |...||==+... ...
T Consensus 156 ~lrl~~YPp~~~~~~~~g~~~HtD~g------------~lTlL~q--d~~v~GLQV~~~------------------g~W 203 (319)
T 1w9y_A 156 GTKVSNYPPCPKPDLIKGLRAHTDAG------------GIILLFQ--DDKVSGLQLLKD------------------GQW 203 (319)
T ss_dssp EEEEEECCCCSCGGGGSSCCCBCCSS------------SEEEEEE--SSSCCCEEEEET------------------TEE
T ss_pred eeEEEecCCCcccccccccccccCCC------------ceEEEEe--cCCCCeeeEeeC------------------CeE
Confidence 47889998642 256777752 4788754 433455333321 137
Q ss_pred eeEecceeeEEEEee----cCCCCCCCCCCcccCCCCCcCeEEEEEEeeeec
Q 030272 129 LSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVN 176 (180)
Q Consensus 129 ~~v~P~~G~al~f~n----~~~~g~~d~~~~H~g~pV~~G~K~~~~~W~~~~ 176 (180)
+.|+|..|..||--- ...||. =..+.|.+.....++|+++.-+++-.
T Consensus 204 i~V~p~pgalvVNiGD~l~~~SnG~-~kS~~HRVv~~~~~~R~Sia~F~~p~ 254 (319)
T 1w9y_A 204 IDVPPMRHSIVVNLGDQLEVITNGK-YKSVMHRVIAQKDGARMSLASFYNPG 254 (319)
T ss_dssp EECCCCTTCEEEEECHHHHHHTTTS-SCCCCEEECCCSSSCCEEEEEEEECC
T ss_pred EEcccCCCcEEEEhHHHHHHHhCCe-eecccceecCCCCCCceEEEEEecCC
Confidence 899999998887421 112333 24789999876667899998877643
No 15
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=81.51 E-value=4.2 Score=31.11 Aligned_cols=116 Identities=13% Similarity=0.065 Sum_probs=67.0
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCccEEEEcCCCC-ccCCCCCccccccccCCCCceeEEEEEeecCCCCCcceecCCCCC
Q 030272 32 DKIIRDIEKRIADFTFFPLENGEGLQVLHYEAGQ-KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQG 110 (180)
Q Consensus 32 ~~~~~~l~~Ri~~~~~~~~~~~E~lqv~~Y~~G~-~y~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~ 110 (180)
.+.+..|.++++++++.+. +..-|..|.+|+ .-.+|.|.... ...+.-++|+-+ |+...|-.-..
T Consensus 81 p~~L~~l~~~~~~~~g~~~---n~~LvN~Y~~G~d~i~~H~D~~~~----~~~~~~IasvSL-------G~~~~f~~~~~ 146 (204)
T 3s57_A 81 IPVLERIRDHVSGVTGQTF---NFVLINRYKDGSDHICEHRDDERE----LAPGSPIASVSF-------GASRDFVFRHK 146 (204)
T ss_dssp CHHHHHHHHHHHHHHCCCC---SEEEEEEESSTTCCEEEECCCCTT----BCTTCCEEEEEE-------ESCEEEEEEEG
T ss_pred CHHHHHHHHHHHHHhCCCC---ceeEEEEECCCCCcccceecChhh----ccCCCcEEEEEC-------CCceEEEEEEc
Confidence 4788999999988877543 346788899999 89999997432 112334444433 44444422100
Q ss_pred CCCCCccccccccccCcCeeEecceeeEEEEeecCCCCCCCCCCcccCCCCC--cCeEEEEEE
Q 030272 111 NISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVI--KGNKWSSTK 171 (180)
Q Consensus 111 ~~~~~~~~~~~~~c~~~~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~--~G~K~~~~~ 171 (180)
..... .. ......+.|.-..|++|++.. ..-....|+..+.. .|.++.+|-
T Consensus 147 ~~~~~----~~-~~~~~~~~~~L~~GsllvM~g-----~~q~~w~H~Ip~~~~~~~~RislTF 199 (204)
T 3s57_A 147 DSRGK----SP-SRRVAVVRLPLAHGSLLMMNH-----PTNTHWYHSLPVRKKVLAPRVNLTF 199 (204)
T ss_dssp GGCSS----SC-SCCCCCEEEEECTTEEEEEET-----THHHHEEEEECCCTTCCSCEEEEEE
T ss_pred CCCcc----cc-ccCCceEEEECCCCCEEEECc-----hhhheeEeeccccCCCCCCEEEEEe
Confidence 00000 00 000124789999999999963 11112357776654 266777763
No 16
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=80.83 E-value=2.9 Score=32.74 Aligned_cols=116 Identities=14% Similarity=0.063 Sum_probs=67.3
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCccEEEEcCCCC-ccCCCCCccccccccCCCCceeEEEEEeecCCCCCcceecCCCCC
Q 030272 32 DKIIRDIEKRIADFTFFPLENGEGLQVLHYEAGQ-KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQG 110 (180)
Q Consensus 32 ~~~~~~l~~Ri~~~~~~~~~~~E~lqv~~Y~~G~-~y~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~ 110 (180)
.+.+..|.++++++++.+ .+..-|..|.+|+ .-.+|.|....- .....++|+-| |+...|-.-..
T Consensus 107 p~~l~~l~~~~~~~~g~~---~n~~LvN~Y~~G~d~i~~H~D~~~~~----~~~~~IaslSL-------G~~~~f~f~~~ 172 (238)
T 2iuw_A 107 HPVLRTLKNRIEENTGHT---FNSLLCNLYRNEKDSVDWHSDDEPSL----GRCPIIASLSF-------GATRTFEMRKK 172 (238)
T ss_dssp CHHHHHHHHHHHHHHSCC---CCEEEEEEECSTTCCEEEECCCCGGG----CSSCCEEEEEE-------ESCEEEEEEEC
T ss_pred CHHHHHHHHHHHHHhCCC---CCEEEEEEECCCCCceeCCcCChhhc----CCCCcEEEEEC-------CCCEEEEEecc
Confidence 356788888888887644 3456888899997 999999974321 11245666543 44445432110
Q ss_pred CCCCCccccccccccCcCeeEecceeeEEEEeecCCCCCCCCCCcccCCCCC--cCeEEEEE
Q 030272 111 NISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVI--KGNKWSST 170 (180)
Q Consensus 111 ~~~~~~~~~~~~~c~~~~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~--~G~K~~~~ 170 (180)
...... . ..+....+.|.-..|++|++.- .......|+..+.. .+.|+.+|
T Consensus 173 ~~~~~~--~--~~~~~~~~~i~L~~gsllvM~G-----~~r~~w~H~I~~~~~~~~~RIsLT 225 (238)
T 2iuw_A 173 PPPEEN--G--DYTYVERVKIPLDHGTLLIMEG-----ATQADWQHRVPKEYHSREPRVNLT 225 (238)
T ss_dssp CC------------CCCEEEEEECTTCEEEEEE-----THHHHEEEEECCCSSCCCCEEEEE
T ss_pred CCcccc--C--cccCCceEEEEcCCCCEEEECh-----hhhCccEecCCCcCCCCCCEEEEE
Confidence 000000 0 0000124789999999999964 11112368888763 56777766
No 17
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=78.92 E-value=2.3 Score=35.16 Aligned_cols=68 Identities=13% Similarity=0.044 Sum_probs=39.4
Q ss_pred HHHHHHHHHHhcCCCCCCCCccEEEEcCCCC-ccCCCCC--ccccccccCCCCceeEEEEEeecCCC--CCcceec-CC
Q 030272 35 IRDIEKRIADFTFFPLENGEGLQVLHYEAGQ-KYEPHFD--YFMDEFNTKNGGQRMATVLMYLSDVE--EGGETVF-PN 107 (180)
Q Consensus 35 ~~~l~~Ri~~~~~~~~~~~E~lqv~~Y~~G~-~y~~H~D--~~~~~~~~~~~~~R~~T~l~YLnd~~--~GGeT~F-p~ 107 (180)
.+++..-+..++|-..-.. .-+...+.||+ -|.||.| +|.- .....|-+|+=+=|.+.. .+|...+ |.
T Consensus 104 ~~rll~vl~~LlG~el~i~-qs~~fe~kPG~KGFpWH~D~~~F~~----~~~eD~a~S~WIpLd~i~~e~nGGM~~VP~ 177 (344)
T 3nnf_A 104 IQEKLALLNYITGKNLMIM-HNALFSVEPNHKGLPWHVGVGSFSF----TKTEDFGASIWIPLDKITKEHRGGMQYVST 177 (344)
T ss_dssp HGGGHHHHHHHHTSCEEEE-EEEEEEECBTCCBSCSBCTTTTTTT----BCTTSCEEEEEEESSCBCTTTBCSEEEECT
T ss_pred HHHHHHHHHHHhCCceeee-ecceEeeCCCCCCCCceeccccccc----ccCCCCeEEEEEECCCCCccCCCceEEecC
Confidence 3344444445555432111 23567788875 5999999 4422 122458888888897765 3555555 63
No 18
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=76.48 E-value=11 Score=31.07 Aligned_cols=88 Identities=15% Similarity=0.114 Sum_probs=54.9
Q ss_pred ccEEEEcCCCC------ccCCCCCccccccccCCCCceeEEEEEeecCCCCCcceecCCCCCCCCCCccccccccccCcC
Q 030272 55 GLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 128 (180)
Q Consensus 55 ~lqv~~Y~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 128 (180)
.+++.+|.+.. ...+|.|+. .+|+|+. |. .||==++. + ...
T Consensus 211 ~lrl~~YPp~~~~~~~~g~~~HtD~g------------~lTlL~q--d~-v~GLQV~~--~----------------g~W 257 (356)
T 1gp6_A 211 QMKINYYPKCPQPELALGVEAHTDVS------------ALTFILH--NM-VPGLQLFY--E----------------GKW 257 (356)
T ss_dssp EEEEEEECCCSSTTTCCSEEEECCCS------------SEEEEEE--CS-CCCEEEEE--T----------------TEE
T ss_pred eeeeeecCCCCCcccccCcCCccCCC------------eEEEEEE--cC-CCCeEEec--C----------------CcE
Confidence 47888998632 245677742 4788765 32 35533332 1 137
Q ss_pred eeEecceeeEEEEee----cCCCCCCCCCCcccCCCCCcCeEEEEEEeeeec
Q 030272 129 LSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVN 176 (180)
Q Consensus 129 ~~v~P~~G~al~f~n----~~~~g~~d~~~~H~g~pV~~G~K~~~~~W~~~~ 176 (180)
+.|+|..|..||--- ...+|. =..++|.+......+|+++.-+++-.
T Consensus 258 i~V~p~pgalvVNiGD~l~~~TnG~-~kS~~HRVv~~~~~~R~Sia~F~~P~ 308 (356)
T 1gp6_A 258 VTAKCVPDSIVMHIGDTLEILSNGK-YKSILHRGLVNKEKVRISWAVFCEPP 308 (356)
T ss_dssp EECCCCTTCEEEEECHHHHHHTTTS-SCCCCEEECCCSSCCEEEEEEEEECC
T ss_pred EECcCCCCeEEEEeccHHHHhcCCE-eeccCceecCCCCCCEEEEEEeecCC
Confidence 899999998887421 112333 24789999765556899998887643
No 19
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=74.81 E-value=5.4 Score=32.38 Aligned_cols=91 Identities=15% Similarity=0.155 Sum_probs=54.7
Q ss_pred CccEEEEcCCCC----------ccCCCCCccccccccCCCCceeEEEEEeecCCCCCc--ceecCCCCCCCCCCcccccc
Q 030272 54 EGLQVLHYEAGQ----------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGG--ETVFPNAQGNISAVPWWNEL 121 (180)
Q Consensus 54 E~lqv~~Y~~G~----------~y~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~~GG--eT~Fp~~~~~~~~~~~~~~~ 121 (180)
..+++.+|.+.. ...+|.|+. .+|+|+. |...|| .+..-. +
T Consensus 157 ~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g------------~lTlL~q--d~~v~G~~~LqV~~-~------------ 209 (311)
T 1dcs_A 157 PLLRFRYFPQVPEHRSAEEQPLRMAPHYDLS------------MVTLIQQ--TPCANGFVSLQAEV-G------------ 209 (311)
T ss_dssp CEEEEEEECC-----------CCEEEEEECS------------SEEEEEE--ECCTTCCCCEEEEE-T------------
T ss_pred hhhheecCCCCCcccccCccccccccccCCC------------eEEEEec--CCCCCCceeEEEEe-C------------
Confidence 357899998631 155777752 4787765 322344 243322 1
Q ss_pred ccccCcCeeEecceeeEEEEee----cCCCCCCCCCCcccCCCCC-----cCeEEEEEEeeeec
Q 030272 122 SECGKTGLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVI-----KGNKWSSTKWIRVN 176 (180)
Q Consensus 122 ~~c~~~~~~v~P~~G~al~f~n----~~~~g~~d~~~~H~g~pV~-----~G~K~~~~~W~~~~ 176 (180)
...+.|+|..|..||--- ...+|.. ..+.|.+.... ..+|+++.-+++-.
T Consensus 210 ----g~W~~V~p~pg~lvVNiGD~l~~~TnG~~-kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~ 268 (311)
T 1dcs_A 210 ----GAFTDLPYRPDAVLVFCGAIATLVTGGQV-KAPRHHVAAPRRDQIAGSSRTSSVFFLRPN 268 (311)
T ss_dssp ----TEEEECCCCTTCEEEEECHHHHHHTTSCS-CCCCEEECCC----CTTCCEEEEEEEECCC
T ss_pred ----CEEEeCcCCCCeEEEEHHHHHHHHhCCcc-cCCCceEeCCCcccCCCCCeEEEEEEEcCC
Confidence 137899999998887421 1123432 47899997654 45799998887643
No 20
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=73.89 E-value=5.8 Score=32.96 Aligned_cols=82 Identities=13% Similarity=0.174 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCccEEEEcCCCCccCCCCCccccccccCCCCceeEEEEEeecCCCCCcceecCCCCCCC
Q 030272 33 KIIRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNI 112 (180)
Q Consensus 33 ~~~~~l~~Ri~~~~~~~~~~~E~lqv~~Y~~G~~y~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~ 112 (180)
+.+..|.+|+.+. ++.....+...|..|.+|+.-.+|.|.... -+..++|+-+ |+...|-.-...
T Consensus 178 ~~L~~l~~r~~~~-~~~~~~~n~~lvN~Y~~G~~I~~H~D~~~~------~~~~I~slSL-------G~~~~f~f~~~~- 242 (345)
T 3tht_A 178 DICESFLEKWLRK-GYIKHKPDQMTINQYEPGQGIPAHIDTHSA------FEDEIVSLSL-------GSEIVMDFKHPD- 242 (345)
T ss_dssp HHHHHHHHHHHHH-TSCSSCCSEEEEEEECTTCCEEEECCCTTT------BCSCEEEEEE-------SSCEEEEEECTT-
T ss_pred HHHHHHHHHHHhc-ccCCCCCCEEEEEEecCCCCEeeccCCchh------cCCeEEEEEC-------CCceeEEEccCC-
Confidence 4567888888652 222233446788889999999999997532 1345555542 555555432100
Q ss_pred CCCccccccccccCcCeeEecceeeEEEEe
Q 030272 113 SAVPWWNELSECGKTGLSIKPKMGDALLFW 142 (180)
Q Consensus 113 ~~~~~~~~~~~c~~~~~~v~P~~G~al~f~ 142 (180)
...+.|.-..|+++++.
T Consensus 243 -------------~~~~~l~L~~gsLlvM~ 259 (345)
T 3tht_A 243 -------------GIAVPVMLPRRSLLVMT 259 (345)
T ss_dssp -------------SCEEEEEECTTEEEEEC
T ss_pred -------------CceEEEEcCCCcEEEEC
Confidence 01356777788888874
No 21
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=69.67 E-value=12 Score=30.51 Aligned_cols=47 Identities=11% Similarity=0.010 Sum_probs=30.3
Q ss_pred CeeEecceeeEEEEee----cCCCCCCCCCCcccCCCCCcCeEEEEEEeeeec
Q 030272 128 GLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVN 176 (180)
Q Consensus 128 ~~~v~P~~G~al~f~n----~~~~g~~d~~~~H~g~pV~~G~K~~~~~W~~~~ 176 (180)
.+.|+|..|..||--- ...+|. =..+.|.+... ..+|+++.-+++-.
T Consensus 239 Wi~V~p~pgalvVNiGD~l~~~TnG~-~kS~~HRVv~~-~~~R~Sia~F~~P~ 289 (331)
T 1odm_A 239 YQDIEADDTGYLINCGSYMAHLTNNY-YKAPIHRVKWV-NAERQSLPFFVNLG 289 (331)
T ss_dssp EEECCCCTTSEEEEECHHHHHHTTTS-SCCCCEEEECC-CSCEEEEEEEECCC
T ss_pred eEECCCCCCeEEEEccHHHHHHhCCE-eeCCCceeCCC-CCCEEEEEEEEcCC
Confidence 5789999998887421 112332 24688988532 45799888877643
No 22
>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*
Probab=66.93 E-value=4.6 Score=33.18 Aligned_cols=43 Identities=16% Similarity=0.234 Sum_probs=35.4
Q ss_pred CeeEecceeeEEEEeecCCCCCCCCCCcccCCCCC---cC-eEEEEEEeeeeccc
Q 030272 128 GLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVI---KG-NKWSSTKWIRVNEY 178 (180)
Q Consensus 128 ~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~---~G-~K~~~~~W~~~~~~ 178 (180)
.+.++=++|+++||.| .+++|+..+-. .| .+|....|+....+
T Consensus 296 ~~~~~w~pGDv~i~DN--------r~vlH~R~~f~~~~~~~~R~L~R~~i~~d~~ 342 (358)
T 2wbq_A 296 LYELVLDQGDVAFIDN--------RRAVHGRRAFQPRYDGRDRWLKRINITRDLH 342 (358)
T ss_dssp CEEEECCTTCEEEEET--------TTEEEEECCCCCCCSSCCCEEEEEEEESCGG
T ss_pred ceEEeecCCCEEEEeC--------cccccCCCCCCCCCCCCCceEEEEEEecCcc
Confidence 5678888999999999 58999988865 34 79999999976544
No 23
>2og5_A Putative oxygenase; non-ribosomal peptide synthesis, iron(II)/alpha-ketoglutarat dependent hydroxylase, jelly-roll fold; 1.45A {Streptomyces coelicolor} PDB: 2og6_A 2og7_A*
Probab=66.28 E-value=4.4 Score=33.47 Aligned_cols=43 Identities=9% Similarity=0.250 Sum_probs=35.3
Q ss_pred CeeEecceeeEEEEeecCCCCCCCCCCcccCCCCCc----CeEEEEEEeeeeccc
Q 030272 128 GLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK----GNKWSSTKWIRVNEY 178 (180)
Q Consensus 128 ~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~----G~K~~~~~W~~~~~~ 178 (180)
.+.++=++|++|||.| .+++|+..+... +.||....|+....+
T Consensus 291 ~~~~~w~pGDivi~DN--------~~vlH~R~~f~d~~~~~~R~L~R~~i~~d~~ 337 (357)
T 2og5_A 291 AVTHRLLPGELAIVDN--------RVTVHGRTEFTPRYDGTDRWLQRTFVLTDLR 337 (357)
T ss_dssp CEEECCCTTCEEEEET--------TTEEEEECCCCCCCSSCSCEEEEEEEESCGG
T ss_pred eEEEeeCCCCEEEEeC--------CccccCCCCCCCCCCCCCcEEEEEEEccccc
Confidence 5778888999999999 589999988752 379999999976543
No 24
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=63.13 E-value=6.5 Score=30.78 Aligned_cols=40 Identities=10% Similarity=-0.159 Sum_probs=33.4
Q ss_pred cCeeEecceeeEEEEeecCCCCCCCCCCcccCCCCCc--CeEEEEEEeee
Q 030272 127 TGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK--GNKWSSTKWIR 174 (180)
Q Consensus 127 ~~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~--G~K~~~~~W~~ 174 (180)
.-+.++=++|++|||.| .+++|+..+-.. +.|+....|+.
T Consensus 230 ~~~~~~w~~GD~~i~DN--------~~vlH~R~~f~~~~~~R~l~R~~i~ 271 (273)
T 1nx8_A 230 YYYKHFWEDGDLLIMDN--------RRVIHEREEFNDDDIVRRLYRGQTA 271 (273)
T ss_dssp TEEEECCCTTCEEEEET--------TTEEEEECCCCCTTCEEEEEEEEEE
T ss_pred eEEEeEecCCCEEEEEC--------CeeeeccccCCCCCCCeEEEEeecc
Confidence 35778888999999999 589999999864 47999888875
No 25
>3pl0_A Uncharacterized protein; quorum sensing, biofilm formation, double-stranded beta-HELI structural genomics; HET: MSE; 1.91A {Methylibium petroleiphilum}
Probab=60.82 E-value=14 Score=29.27 Aligned_cols=72 Identities=24% Similarity=0.313 Sum_probs=44.4
Q ss_pred CCceeEEEEEeecCCCCCcceecCCCCCCCCCCccccccccccCcCeeEe-cceeeEEEEeecCCCCCCCCCCcccCCCC
Q 030272 83 GGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIK-PKMGDALLFWSMKPDASLDPSSLHGGCPV 161 (180)
Q Consensus 83 ~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~v~-P~~G~al~f~n~~~~g~~d~~~~H~g~pV 161 (180)
+..-++.+++--+++. ||+|.....+.. ....+. -+.|.++++. |.+.+|.+.||
T Consensus 169 G~d~v~v~lv~R~Ni~-GGet~I~~~~~~---------------~~~~~~l~~p~d~llv~--------D~~~~H~vTpI 224 (254)
T 3pl0_A 169 GVDFVAVVFIGRQGVR-GGETRVFDAAGP---------------QGVRFTLEQPWTVLLLD--------DQQVIHESTPL 224 (254)
T ss_dssp SSSEEEEEEEEEESEE-ECCEEEEETTSS---------------EEEEECCCSTTCEEEEE--------TTTEEEEECCE
T ss_pred CCCEEEEEEecCCccc-cceEEEEcCCCC---------------ccceeEecCCCcEEEEe--------CCcccCCCCcc
Confidence 3455666777766654 888887653211 122222 3567777764 57899999998
Q ss_pred Cc---------CeEEEEEEeeeeccc
Q 030272 162 IK---------GNKWSSTKWIRVNEY 178 (180)
Q Consensus 162 ~~---------G~K~~~~~W~~~~~~ 178 (180)
.. |.+=++..=++...|
T Consensus 225 ~~~~~~~~~~~g~RDvlVvtf~~~~~ 250 (254)
T 3pl0_A 225 LPLDPADPAVPAHRDTLVLTYRSGGF 250 (254)
T ss_dssp EESCTTCTTSCCEEEEEEEEEESSSC
T ss_pred ccCCCCCCCCceEEEEEEEEecCCcc
Confidence 74 556666665555544
No 26
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=58.58 E-value=25 Score=28.26 Aligned_cols=105 Identities=20% Similarity=0.226 Sum_probs=59.4
Q ss_pred HHHHHHHhcCCCCCC--------CCccEEEEcCCCC------ccCCCCCccccccccCCCCceeEEEEEeecCCCCCcce
Q 030272 38 IEKRIADFTFFPLEN--------GEGLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGET 103 (180)
Q Consensus 38 l~~Ri~~~~~~~~~~--------~E~lqv~~Y~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT 103 (180)
|.+-|+..+|++... ...+++.+|.+.. ...+|.|+. .+|+|+ .|. .|| +
T Consensus 145 ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g------------~lTlL~--qd~-v~G-L 208 (312)
T 3oox_A 145 VLEAIATYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDIN------------TITLLL--GAE-EGG-L 208 (312)
T ss_dssp HHHHHHHHTTSCTTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCS------------SEEEEE--CCT-TSC-E
T ss_pred HHHHHHHHhCcCHHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCc------------eEEEEe--EcC-cCc-e
Confidence 333344445776432 2347888998732 244677752 478774 342 344 3
Q ss_pred ecCCCCCCCCCCccccccccccCcCeeEecceeeEEEEee----cCCCCCCCCCCcccCCCCC----cCeEEEEEEeeee
Q 030272 104 VFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVI----KGNKWSSTKWIRV 175 (180)
Q Consensus 104 ~Fp~~~~~~~~~~~~~~~~~c~~~~~~v~P~~G~al~f~n----~~~~g~~d~~~~H~g~pV~----~G~K~~~~~W~~~ 175 (180)
..-.-+ ...+.|+|..|..||--- ...+|. =..+.|.+.... ..+|+++.-+++-
T Consensus 209 qV~~~~----------------g~W~~V~p~pg~~vVNiGD~l~~~TnG~-~kS~~HRVv~~~~~~~~~~R~Sia~F~~P 271 (312)
T 3oox_A 209 EVLDRD----------------GQWLPINPPPGCLVINIGDMLERLTNNV-LPSTVHRVVNPPPERRGVPRYSTPFFLHF 271 (312)
T ss_dssp EEECTT----------------SCEEECCCCSSCEEEEECHHHHHHTTTS-SCCCCEEECCCCGGGTTSCEEECCEEECC
T ss_pred EEECCC----------------CcEEECCCCCCeEEEEhHHHHHHHhCCe-ecCCCceEeCCCccCCCCCEEEEEEEecC
Confidence 331111 137899999999887421 112333 346899986432 2359988877754
No 27
>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} SCOP: b.33.1.0 PDB: 4emj_B*
Probab=58.04 E-value=18 Score=23.94 Aligned_cols=49 Identities=12% Similarity=0.224 Sum_probs=33.3
Q ss_pred EEEeecCCCCCcceecCCCCCCCCCCccccccccccCcCeeEecceeeEEEEeecCCCCCCCCCCcccCCCCCcC
Q 030272 90 VLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 164 (180)
Q Consensus 90 ~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~G 164 (180)
.+.-+.|..+|+...|.... ..+.|....|....|.| ...|.++|+..|
T Consensus 4 ~v~~~~~l~~g~~~~~~~~g-----------------~~i~v~r~~g~~~A~~~---------~CpH~g~~L~~g 52 (106)
T 3dqy_A 4 YILRQGDLPPGEMQRYEGGP-----------------EPVMVCNVDGEFFAVQD---------TCTHGDWALSDG 52 (106)
T ss_dssp EEEEGGGSCTTCEEEECCSS-----------------SCEEEEEETTEEEEEES---------BCSSSSCBGGGS
T ss_pred EEEEHHHCCCCCEEEEEECC-----------------EEEEEEEECCEEEEEeC---------cCCCCCCCCcCc
Confidence 34556777777766665321 24555557788888876 789999999876
No 28
>1ds1_A Clavaminate synthase 1; oxygenase, trifunctional enzyme, oxidoreductase,lyase; HET: AKG; 1.08A {Streptomyces clavuligerus} SCOP: b.82.2.2 PDB: 1drt_A* 1ds0_A 1dry_A* 1gvg_A*
Probab=55.60 E-value=8.3 Score=31.14 Aligned_cols=42 Identities=21% Similarity=0.401 Sum_probs=34.6
Q ss_pred cCeeEecceeeEEEEeecCCCCCCCCCCcccCCCCCc---C-eEEEEEEeeeec
Q 030272 127 TGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK---G-NKWSSTKWIRVN 176 (180)
Q Consensus 127 ~~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~---G-~K~~~~~W~~~~ 176 (180)
..+.++=++|++|||.| .+++|+..+... | .||....|+...
T Consensus 258 ~~~~~~w~~GDv~i~DN--------~~~lH~R~~f~~~~~~~~R~L~R~~v~~d 303 (324)
T 1ds1_A 258 VTEAVYLEPGDLLIVDN--------FRTTHARTPFSPRWDGKDRWLHRVYIRTD 303 (324)
T ss_dssp TCEEECCCTTCEEEEET--------TTEEEEECCCCCCCSSCCCEEEEEEEECS
T ss_pred ccEEEeeCCCCEEEEeC--------CceeecCCccCCCCCCCCcEEEEEEEecC
Confidence 35778889999999999 589999888763 3 799999998654
No 29
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=54.91 E-value=11 Score=29.64 Aligned_cols=41 Identities=7% Similarity=-0.072 Sum_probs=34.0
Q ss_pred CeeEecceeeEEEEeecCCCCCCCCCCcccCCCCC-cCeEEEEEEeeeec
Q 030272 128 GLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVI-KGNKWSSTKWIRVN 176 (180)
Q Consensus 128 ~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~-~G~K~~~~~W~~~~ 176 (180)
-+.++=++|++|||.| .+++|+..+-. .+.|+....|+...
T Consensus 235 ~~~~~w~~GDv~i~DN--------~~~lH~r~~f~~~~~R~l~R~~i~~d 276 (283)
T 1otj_A 235 QVRWRWQPNDIAIWDN--------RVTQHYANADYLPQRRIMHRATILGD 276 (283)
T ss_dssp EEEECCCTTCEEEEET--------TSEEEEECCCCTTSCEEEEEEEEECC
T ss_pred EEEeeEcCCCEEEEEC--------cceeecccCCCCCCceEEEEEEEecC
Confidence 4677778999999999 58999999976 45799999998753
No 30
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=53.62 E-value=6.6 Score=32.89 Aligned_cols=44 Identities=16% Similarity=0.155 Sum_probs=36.6
Q ss_pred cCeeEecceeeEEEEeecCCCCCCCCCCcccCCCCCc--C-eEEEEEEeeeeccc
Q 030272 127 TGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK--G-NKWSSTKWIRVNEY 178 (180)
Q Consensus 127 ~~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~--G-~K~~~~~W~~~~~~ 178 (180)
..+.++=++|+++||.| .+++|+..+-.. | .+|....|+....+
T Consensus 327 ~~~~~~~~pGd~vi~DN--------r~~lH~R~~f~~~~~~~R~L~r~yi~~d~~ 373 (388)
T 3o2g_A 327 SKFTFKMNPGDVITFDN--------WRLLHGRRSYEAGTEISRHLEGAYADWDVV 373 (388)
T ss_dssp TCEEECCCTTCEEEEET--------TTEEEEECCCCCCSSCSCEEEEEEECHHHH
T ss_pred hEEEEEcCCCcEEEEeC--------cEEeeCCCCcCCCCCCCEEEEEEEEcchHH
Confidence 45888889999999999 589999998763 4 79999999976554
No 31
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=50.34 E-value=4.7 Score=34.88 Aligned_cols=82 Identities=23% Similarity=0.357 Sum_probs=52.4
Q ss_pred CCceeEEEEEeecCC--CCCcceecCCCCC--------C-----CCC-----Cc--------cccccccccCcCeeEec-
Q 030272 83 GGQRMATVLMYLSDV--EEGGETVFPNAQG--------N-----ISA-----VP--------WWNELSECGKTGLSIKP- 133 (180)
Q Consensus 83 ~~~R~~T~l~YLnd~--~~GGeT~Fp~~~~--------~-----~~~-----~~--------~~~~~~~c~~~~~~v~P- 133 (180)
+.-|.+==++=|++. .+||=.+.| +.. . .++ .+ .|....+ ..+...|
T Consensus 295 s~FR~fQGwlaLS~~gP~eGtL~v~P-~~~atAY~LLRpFf~~~~d~~~~Ga~pg~~q~~~~~~HP~L~---~~mv~iP~ 370 (461)
T 2dbn_A 295 SVFRTFQGWTALSDMLPGQGLLHVVP-IPEAMAYVLLRPLLDDVPEDELCGVAPGRVLPVSEQWHPLLI---EALTSIPK 370 (461)
T ss_dssp CSCCSEEEEEESSCBCTTSSCEEECS-CTTHHHHHHHGGGSTTSCTTCCTTCCTTSCEECCTTTCHHHH---TTCEECCC
T ss_pred cccceeeeehhccCCCCCCCcEEEee-chhhHHHHhhhhhhccCCcccccCCCCCcccCCCcccCCccc---CceeeCCC
Confidence 456667777888875 578888888 421 0 000 00 1111111 2333444
Q ss_pred -ceeeEEEEeecCCCCCCCCCCcccCCCCCcCeEEEEEEeeeecc
Q 030272 134 -KMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVNE 177 (180)
Q Consensus 134 -~~G~al~f~n~~~~g~~d~~~~H~g~pV~~G~K~~~~~W~~~~~ 177 (180)
+.|+.|+|.. ++.|++.|+..|..+.....|-..|
T Consensus 371 vePGD~V~WH~---------D~iH~V~~~h~g~~~s~V~YIpa~P 406 (461)
T 2dbn_A 371 LEAGDSVWWHC---------DVIHSVAPVENQQGWGNVMYIPAAP 406 (461)
T ss_dssp BCTTCEEEEET---------TCCEEECCBSSCCSCCCEEECCBCE
T ss_pred CCCCCEEEEcC---------CCccccccCCCCCcceeEEEecCCC
Confidence 6799999975 8999999999999888877776544
No 32
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=46.95 E-value=52 Score=25.96 Aligned_cols=89 Identities=21% Similarity=0.225 Sum_probs=52.7
Q ss_pred ccEEEEcCCCC--------ccCCCCCccccccccCCCCceeEEEEEeecCCCCCcceecCCCCCCCCCCccccccccccC
Q 030272 55 GLQVLHYEAGQ--------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGK 126 (180)
Q Consensus 55 ~lqv~~Y~~G~--------~y~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~ 126 (180)
.+++.+|.+.. ...+|.|+. .+|+|+. | ..||==+... + .
T Consensus 151 ~lr~~~YP~~~~~~~~~~~g~~~HtD~g------------~lTlL~q--d-~~~GLqV~~~-~----------------g 198 (280)
T 3on7_A 151 LLRILHYPPMTGDEEMGAIRAAAHEDIN------------LITVLPT--A-NEPGLQVKAK-D----------------G 198 (280)
T ss_dssp EEEEEEECCCCTTCCCCSEEEEEECCCS------------SEEEEEC--C-SCCCEEEECT-T----------------S
T ss_pred eEEEEECCCCCCccccCcccccCCCCCC------------eEEEEEe--c-CCCCeEEEcC-C----------------C
Confidence 47899998632 145677752 4777753 3 2344333321 1 1
Q ss_pred cCeeEecceeeEEEEee----cCCCCCCCCCCcccCCCCC----cCeEEEEEEeeeec
Q 030272 127 TGLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVI----KGNKWSSTKWIRVN 176 (180)
Q Consensus 127 ~~~~v~P~~G~al~f~n----~~~~g~~d~~~~H~g~pV~----~G~K~~~~~W~~~~ 176 (180)
..+.|+|..|..||--- ...||. =..+.|.+.... ..+|+++.-+++-.
T Consensus 199 ~W~~V~p~pg~~vVNiGD~l~~~Tng~-~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~ 255 (280)
T 3on7_A 199 SWLDVPSDFGNIIINIGDMLQEASDGY-FPSTSHRVINPEGTDKTKSRISLPLFLHPH 255 (280)
T ss_dssp CEEECCCCTTCEEEEECHHHHHHTTTS-SCCCCEEEECCTTCCTTSCEEECCEEECCC
T ss_pred CEEECcCCCCEEEEEcChHHHHHhCCc-ccCCCceEeCCCCCCCCCCeEEEEEEEcCC
Confidence 37899999999887421 112333 347899975442 34799888777643
No 33
>2i7f_A Ferredoxin component of dioxygenase; rieske ferredoxin, oxidoreductase; HET: CIT; 1.90A {Sphingobium yanoikuyae}
Probab=41.61 E-value=57 Score=21.46 Aligned_cols=50 Identities=16% Similarity=0.232 Sum_probs=32.4
Q ss_pred EEEEeecCCCCCcceecCCCCCCCCCCccccccccccCcC-eeEecceeeEEEEeecCCCCCCCCCCcccCCCCCcC
Q 030272 89 TVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG-LSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 164 (180)
Q Consensus 89 T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~-~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~G 164 (180)
..+.-++|..+|+...|.... .. +.|.-..|....|.| ...|.++|+..|
T Consensus 5 ~~v~~~~~l~~g~~~~~~~~g-----------------~~~v~v~r~~g~~~A~~~---------~CpH~g~~L~~g 55 (108)
T 2i7f_A 5 LRLCQVASVKDGEPVAVYQEK-----------------MPALAVYNVDGEVFVTDN---------LCTHGNAMLTDG 55 (108)
T ss_dssp EEEEEGGGCBTTBCEEECCTT-----------------SSCEEEEEETTEEEEEES---------BCSSSSCBGGGS
T ss_pred EEEEEHhHcCCCCeEEEEECC-----------------eeEEEEEEECCEEEEEeC---------cCCCCCCCCCCC
Confidence 445667777777766665321 12 333323777777776 789999999776
No 34
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=39.55 E-value=24 Score=27.93 Aligned_cols=37 Identities=19% Similarity=0.140 Sum_probs=25.1
Q ss_pred CccCCCCCccccccccCCCCceeEEEEEeecCCCCCcceecCC
Q 030272 65 QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPN 107 (180)
Q Consensus 65 ~~y~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~ 107 (180)
+...||.|..... ..-.+++|.-+.-+..||+|.|-.
T Consensus 92 ~~~~wH~D~sy~~------~pp~~~~l~~~~~p~~GG~T~~~d 128 (277)
T 3pvj_A 92 DNAVWHTDVTFLP------TPALGAVLSAKQLPAYGGDTLWAS 128 (277)
T ss_dssp GGSSCBCTTTTSS------SCCCEEEEEEEECCSSCCCEEEEE
T ss_pred cCCCceeeCCCcC------CCCceEEEEeeccCCCCCCcEeee
Confidence 4567999986532 223466666666678899999853
No 35
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=39.41 E-value=39 Score=27.11 Aligned_cols=36 Identities=19% Similarity=0.205 Sum_probs=24.1
Q ss_pred CccCCCCCccccccccCCCCceeEEEEEeecCCCCCcceecC
Q 030272 65 QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFP 106 (180)
Q Consensus 65 ~~y~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp 106 (180)
....||.|..... ..-.+++|.-+.-+..||+|.|-
T Consensus 98 ~~~~wH~D~s~~~------~pp~~~~l~~~~~p~~GG~T~fa 133 (301)
T 3r1j_A 98 KATRWHTDVTFAA------NYPAASILRAVTLPSYGGSTLWA 133 (301)
T ss_dssp -CCSCBCTTTTSS------SCCSEEEEEEEECCSSCCCEEEE
T ss_pred CCCCCccccCCcc------CCCceeEEEEeecCCCCCCCeeE
Confidence 4567999976542 22345666666667789999985
No 36
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=39.12 E-value=26 Score=27.36 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=23.1
Q ss_pred CCCCCccccccccCCCCceeEEEEEeecCCCCCcceecCC
Q 030272 68 EPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPN 107 (180)
Q Consensus 68 ~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~ 107 (180)
.+|.|..... ..-.+++|.=+.-+..||+|.|-.
T Consensus 97 ~wHtD~sy~~------~pp~~~~L~c~~~p~~GG~T~~~d 130 (283)
T 1otj_A 97 NWHTDVTFIE------TPPAGAILAAKELPSTGGDTLWTS 130 (283)
T ss_dssp SCBCTTTTSS------SCEEEEEEEEEECCSSCCCEEEEE
T ss_pred CcEeeccCcc------CCCceEEEEEEecCCCCCcceeee
Confidence 5899975432 233456666666677899999965
No 37
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=37.13 E-value=28 Score=27.68 Aligned_cols=41 Identities=12% Similarity=0.070 Sum_probs=32.3
Q ss_pred cCeeEecceeeEEEEeecCCCCCCCCCCcccCCCCCcC-eEEEEEEeeee
Q 030272 127 TGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG-NKWSSTKWIRV 175 (180)
Q Consensus 127 ~~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~G-~K~~~~~W~~~ 175 (180)
.-+..+=++|++|||.| .+++|+..+-..+ .|+.-..|+..
T Consensus 240 ~~~~~~w~~GDlviwDN--------r~vlH~r~~~~~~~~R~l~R~~i~g 281 (293)
T 3eat_X 240 AHYAHRWRSDDLVIADN--------LTLLHGREAFAHRAPRHLRRVHIHA 281 (293)
T ss_dssp TEEEECCCTTCEEEEET--------TTEEEEECCBSSCCCEEEEEEEEEE
T ss_pred cEEEEEcCCCCEEEEeC--------CceEEcccCCCCCCceEEEEEEEcC
Confidence 34677778999999999 5899999886543 58888888754
No 38
>2pp6_A Gifsy-2 prophage ATP-binding sugar transporter-LI protein; beta barrel, 4 helix bundle, structural genomics, PSI-2; 2.70A {Salmonella typhimurium LT2} SCOP: b.106.1.2
Probab=36.99 E-value=31 Score=23.53 Aligned_cols=25 Identities=28% Similarity=0.623 Sum_probs=20.9
Q ss_pred EecceeeEEEEeecCCCCCCCCCCcccCCCCCcCeEEEEEEeeeec
Q 030272 131 IKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVN 176 (180)
Q Consensus 131 v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~G~K~~~~~W~~~~ 176 (180)
.+|++|+.|+|. |..|+.+.|-+..
T Consensus 62 YrP~r~D~Vv~~---------------------Gk~y~Vtr~~~~n 86 (102)
T 2pp6_A 62 VIPRRGDRVVLR---------------------GSEFTVTRIRRFN 86 (102)
T ss_dssp CCCCTTCEEEET---------------------TEEEEEEEEEEET
T ss_pred cccCCCCEEEEc---------------------CcEEEEEEEEEEC
Confidence 789999999993 7899998887654
No 39
>3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans}
Probab=36.30 E-value=34 Score=23.33 Aligned_cols=51 Identities=12% Similarity=0.074 Sum_probs=33.4
Q ss_pred EEEEEeecCCCCCcceecCCCCCCCCCCccccccccccCcCeeEecceeeEEEEeecCCCCCCCCCCcccCCCCCcC
Q 030272 88 ATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 164 (180)
Q Consensus 88 ~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~G 164 (180)
+..+.-++|..+|+...|.... ..+.|.-..|....|.| ...|.++|+..|
T Consensus 11 w~~v~~~~el~~g~~~~~~~~g-----------------~~v~v~r~~g~~~A~~n---------~CpH~g~~L~~G 61 (121)
T 3gce_A 11 PVRVATLDQLKPGVPTAFDVDG-----------------DEVMVVRDGDSVYAISN---------LCSHAEAYLDMG 61 (121)
T ss_dssp CEEEEEGGGSCTTCCEEEEETT-----------------EEEEEEEETTEEEEEES---------BCSSSSCBGGGS
T ss_pred cEEEEEHHHCCCCCEEEEEECC-----------------EEEEEEEECCEEEEEeC---------cCCCCCCCCCCC
Confidence 4456677888777776664321 12333335677777766 789999999877
No 40
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=35.76 E-value=31 Score=27.32 Aligned_cols=37 Identities=27% Similarity=0.314 Sum_probs=24.7
Q ss_pred CccCCCCCccccccccCCCCceeEEEEEeecCCCCCcceecCC
Q 030272 65 QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPN 107 (180)
Q Consensus 65 ~~y~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~ 107 (180)
....+|.|..... ..-.+++|.=+.-+..||+|.|-+
T Consensus 103 ~~~~wHtD~sy~~------~pP~~~~L~c~~~p~~GG~T~~ad 139 (301)
T 1oih_A 103 RANSWHTDVTFVE------AYPKASILRSVVAPASGGDTVWAN 139 (301)
T ss_dssp CCCSCBCTTTTSS------SCCSEEEEEEEECCSSCCCEEEEE
T ss_pred cCcCCEecccCcC------CCCceEEEEEeecCCCCCcccccc
Confidence 4566999976532 223456666666677899999854
No 41
>1vm9_A Toluene-4-monooxygenase system protein C; structural genomics, CESG, protein structure initiative, PSI, ferredoxin, FES, [2Fe-2S] cluster; 1.48A {Pseudomonas mendocina} SCOP: b.33.1.1 PDB: 2q3w_A 1sjg_A
Probab=34.29 E-value=49 Score=21.92 Aligned_cols=27 Identities=7% Similarity=0.084 Sum_probs=19.2
Q ss_pred eEecceeeEEEEeecCCCCCCCCCCcccCCCCCcCe
Q 030272 130 SIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGN 165 (180)
Q Consensus 130 ~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~G~ 165 (180)
-++-..|....|.| ...|.++|+..|.
T Consensus 29 v~r~~~g~~~A~~~---------~CpH~g~~L~~g~ 55 (111)
T 1vm9_A 29 IVNSEEHGVKAYQA---------MCPHQEILLSEGS 55 (111)
T ss_dssp EEEETTTEEEEEES---------BCSSSSCBGGGSE
T ss_pred EEEeCCCeEEEEeC---------cCCCCCcCCCCce
Confidence 34445777777776 7889999887763
No 42
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=32.45 E-value=32 Score=27.22 Aligned_cols=41 Identities=7% Similarity=-0.013 Sum_probs=33.5
Q ss_pred cCeeEecceeeEEEEeecCCCCCCCCCCcccCCCCCcC-eEEEEEEeeee
Q 030272 127 TGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG-NKWSSTKWIRV 175 (180)
Q Consensus 127 ~~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~G-~K~~~~~W~~~ 175 (180)
.-+.++=++|++|||.| .+++|+..+-..+ .|+.-..|+..
T Consensus 243 ~~~~~~w~~GDvvi~DN--------r~~lH~r~~f~~~~~R~l~R~~i~g 284 (301)
T 1oih_A 243 NTVRWRWEAGDVAIWDN--------RATQHYAVDDYGTQPRIVRRVTLAG 284 (301)
T ss_dssp GEEEECCCTTCEEEEET--------TSEEEEECCCCTTSCCEEEEEEECC
T ss_pred ceEEEEEcCCCEEEEEc--------cceeecccCCCCCCceEEEEEEEeC
Confidence 45788889999999999 5899999987643 78888888864
No 43
>4aiv_A Probable nitrite reductase [NAD(P)H] small subuni; oxidoreductase, nitrite metabolism; 2.00A {Mycobacterium tuberculosis}
Probab=30.42 E-value=90 Score=21.22 Aligned_cols=55 Identities=11% Similarity=0.076 Sum_probs=33.4
Q ss_pred ceeEEEEEeecCCCCCcceecCCCCCCCCCCccccccccccCcCee-EecceeeEEEEeecCCCCCCCCCCcccCCCCCc
Q 030272 85 QRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLS-IKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK 163 (180)
Q Consensus 85 ~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~-v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~ 163 (180)
-+.+.-+.-++|...|+...+-..+. ..+. ++...|..-.+.| ...|.+.|+.+
T Consensus 7 ~~~W~~Vc~~~dL~~g~~~~~~~~~G----------------~~v~l~r~~dG~v~A~~n---------~CpH~ga~L~~ 61 (119)
T 4aiv_A 7 IQVWTTACAYDHLIPGRGVGVLLDDG----------------SQVALFRLDDGSVHAVGN---------VDPFSGAAVMS 61 (119)
T ss_dssp EEEEEEEEEGGGSCTTCCEEEECTTS----------------CEEEEEECTTSCEEEEES---------BCTTTCCBCGG
T ss_pred ccceeEeeEHHHcCCCCceEEEEcCC----------------cEEEEEEcCCCeEEEEEC---------CCCCCCCcccc
Confidence 34567777888887776555543211 1232 3444566555555 88999999876
Q ss_pred C
Q 030272 164 G 164 (180)
Q Consensus 164 G 164 (180)
|
T Consensus 62 ~ 62 (119)
T 4aiv_A 62 R 62 (119)
T ss_dssp G
T ss_pred C
Confidence 5
No 44
>2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida}
Probab=30.27 E-value=69 Score=20.81 Aligned_cols=23 Identities=17% Similarity=0.175 Sum_probs=17.4
Q ss_pred ceeeEEEEeecCCCCCCCCCCcccCCCCCcCe
Q 030272 134 KMGDALLFWSMKPDASLDPSSLHGGCPVIKGN 165 (180)
Q Consensus 134 ~~G~al~f~n~~~~g~~d~~~~H~g~pV~~G~ 165 (180)
..|....|.| ...|.++|+..|.
T Consensus 33 ~~g~~~A~~~---------~CpH~g~~L~~g~ 55 (103)
T 2qpz_A 33 VEGEIYATDN---------LCTHGSARMSDGY 55 (103)
T ss_dssp ETTEEEEEES---------BCSSSSCBGGGSE
T ss_pred ECCEEEEECC---------cCCCCCCCCCCCe
Confidence 6677777766 7889999987663
No 45
>1fqt_A Rieske-type ferredoxin of biphenyl dioxygenase; 2Fe-2S cluster, beta sandwich, oxido; 1.60A {Burkholderia xenovorans} SCOP: b.33.1.1 PDB: 2e4q_A 2e4p_A 2yvj_B*
Probab=29.63 E-value=58 Score=21.61 Aligned_cols=50 Identities=22% Similarity=0.224 Sum_probs=29.8
Q ss_pred EEEEeecCCCCCcceecCCCCCCCCCCccccccccccCcCeeEecceeeEEEEeecCCCCCCCCCCcccCCCCCcC
Q 030272 89 TVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 164 (180)
Q Consensus 89 T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~G 164 (180)
..+.-++|..+|+...|.... ..+.|.-..|....|.| ...|.++|+..|
T Consensus 7 ~~v~~~~~l~~g~~~~~~~~g-----------------~~i~v~r~~g~~~A~~n---------~CpH~g~~L~~g 56 (112)
T 1fqt_A 7 TRVCDRRDVPEGEALKVESGG-----------------TSVAIFNVDGELFATQD---------RCTHGDWSLSDG 56 (112)
T ss_dssp EEEEEGGGSCTTCEEEEEETT-----------------EEEEEEEETTEEEEEES---------BCTTSSCBSSTT
T ss_pred EEeEeHHHCCCCCeEEEEECC-----------------EEEEEEEECCEEEEEEC---------CCCCCCcCCCCC
Confidence 345566777666655554221 12333222677777765 789999998776
No 46
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=28.60 E-value=23 Score=28.44 Aligned_cols=34 Identities=21% Similarity=0.207 Sum_probs=26.6
Q ss_pred CeeEecceeeEEEEeecCCCCCCCCCCcccCCCCCcCeEEEEE
Q 030272 128 GLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSST 170 (180)
Q Consensus 128 ~~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~G~K~~~~ 170 (180)
-+.++=++|++|||.| .+++|+..|- .|.+.++.
T Consensus 293 ~~~~~w~~GDv~i~DN--------~~~lH~R~~f-~g~rR~l~ 326 (330)
T 2q4a_A 293 CVAVPWQRGDVLLIDN--------WAVLHSRRPF-DPPRRVLA 326 (330)
T ss_dssp CBCCCCCTTCEEEEET--------TTEEEEECCE-ESCCEEEE
T ss_pred EeecCCCCCCEEEEec--------ccccccCCCC-CCCceEEE
Confidence 4667778999999999 5899999995 67655544
No 47
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=27.74 E-value=29 Score=27.82 Aligned_cols=38 Identities=18% Similarity=0.053 Sum_probs=24.2
Q ss_pred CCccCCCCCccccccccCCCCceeEEEEEeecCCCCCcceecCC
Q 030272 64 GQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPN 107 (180)
Q Consensus 64 G~~y~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~ 107 (180)
.....+|.|..... ..-..++|.=+.-+.+||+|.|-.
T Consensus 114 ~~~~~~HtD~sy~~------~pP~~~~L~c~~~p~~GG~T~~ad 151 (330)
T 2q4a_A 114 DQKIPFHHEMAQVR------EFPSKLFFYCEIEPKCGGETPIVL 151 (330)
T ss_dssp TSCEEEECTTTTST------TCCSEEEEEEEECCSEECCCCEEE
T ss_pred ccccccccccCCCC------CCCceEEEECcCCCCcCCceeeec
Confidence 34566898875432 122355666666677899999854
No 48
>2de6_D Ferredoxin component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Pseudomonas resinovorans} PDB: 2de5_D 1vck_A 2de7_D*
Probab=26.26 E-value=64 Score=21.65 Aligned_cols=21 Identities=14% Similarity=0.083 Sum_probs=15.8
Q ss_pred eeeEEEEeecCCCCCCCCCCcccCCCCCcC
Q 030272 135 MGDALLFWSMKPDASLDPSSLHGGCPVIKG 164 (180)
Q Consensus 135 ~G~al~f~n~~~~g~~d~~~~H~g~pV~~G 164 (180)
.|....|.| ...|.++|+..|
T Consensus 36 ~g~~~A~~n---------~CpH~g~~L~~g 56 (115)
T 2de6_D 36 GDQFYATED---------TCTHGIASLSEG 56 (115)
T ss_dssp TTEEEEEES---------BCTTSSCBGGGS
T ss_pred CCEEEEEeC---------CCCCCCCCCcCC
Confidence 566666655 789999998776
No 49
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=25.31 E-value=35 Score=26.47 Aligned_cols=36 Identities=17% Similarity=-0.092 Sum_probs=22.6
Q ss_pred ccCCCCCccccccccCCCCceeEEEEEeecCCC--CCcceecCC
Q 030272 66 KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE--EGGETVFPN 107 (180)
Q Consensus 66 ~y~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~--~GGeT~Fp~ 107 (180)
...+|.|..... ..-.+++|.=+.-+. +||+|.|-.
T Consensus 97 ~~~~HtD~sy~~------~pp~~~~L~c~~~p~~~~GG~T~~~d 134 (273)
T 1nx8_A 97 QLPFHADGGLLL------SQVDQVFLYAAEIKNVKFRGATTVCD 134 (273)
T ss_dssp CEEEECTTTTTT------CCCCEEEEEEEEEESCSSSSCEEEEE
T ss_pred CCCCcCCCCCcc------CCCeeEEEEeEeCCCCCCCCcchhhh
Confidence 455899875432 122345555555566 899999965
No 50
>3azc_A Cytochrome B6-F complex iron-sulfur subunit; rieske, thermosynechococcus elongatu photosynthesis, electron transport; 2.00A {Thermosynechococcus elongatus}
Probab=30.62 E-value=16 Score=26.03 Aligned_cols=56 Identities=18% Similarity=0.153 Sum_probs=35.7
Q ss_pred ceeEEEEEeecCCCCCcceecCCCCCCCCCCccccccccccCcCeeEecceee--EEEEeecCCCCCCCCCCcccCCCCC
Q 030272 85 QRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGD--ALLFWSMKPDASLDPSSLHGGCPVI 162 (180)
Q Consensus 85 ~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~v~P~~G~--al~f~n~~~~g~~d~~~~H~g~pV~ 162 (180)
-.-+|+.-||.|...|+...+..+-. +..+.|.-..|. ...|.| ...|.++|+.
T Consensus 14 g~~v~~~~~~~~l~~g~~~~v~~l~g---------------~~~vlv~~~~G~~~v~A~~n---------~CpH~g~~L~ 69 (133)
T 3azc_A 14 GNDIKVSEYLAKHLPGDRSLAQGIKG---------------DPTYVIVTEDHQIANYGLNA---------VCTHLGCVVP 69 (133)
Confidence 34578888899988888776653211 013445555565 555554 7889999887
Q ss_pred cC
Q 030272 163 KG 164 (180)
Q Consensus 163 ~G 164 (180)
.|
T Consensus 70 ~g 71 (133)
T 3azc_A 70 WN 71 (133)
Confidence 65
No 51
>1is3_A Congerin II; complex with lactose and MES, sugar binding protein; HET: LAT MES; 1.45A {Conger myriaster} SCOP: b.29.1.3 PDB: 1is4_A* 1is5_A 1is6_A* 1wld_A* 1wlw_A* 1wlc_A* 3ak0_A* 3ajz_A*
Probab=23.35 E-value=76 Score=22.18 Aligned_cols=44 Identities=14% Similarity=0.276 Sum_probs=32.1
Q ss_pred eEEEEeecCCCCCCCCCCcccCCCCCcCeEEEEEEeeeeccccC
Q 030272 137 DALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVNEYKV 180 (180)
Q Consensus 137 ~al~f~n~~~~g~~d~~~~H~g~pV~~G~K~~~~~W~~~~~~~~ 180 (180)
..|++.+...+|.....-.+...|...|.-..+.+.+....|+|
T Consensus 56 ~~IV~Ns~~~~g~Wg~Eer~~~~PF~~G~~F~l~I~~~~~~f~V 99 (135)
T 1is3_A 56 NVLVLNSLVHNVGWQQEERSKKFPFTKGDHFQTTITFDTHTFYI 99 (135)
T ss_dssp SEEEEEEEETTTEECCCEEECCCCCCTTSEEEEEEEECSSEEEE
T ss_pred CEEEEeCccCCCcCccceEeCCCcccCCCcEEEEEEEcCCEEEE
Confidence 57777666553544444456678999999999999988877754
No 52
>1g86_A Charcot-leyden crystal protein; beta barrel, hydrolase; 1.80A {Homo sapiens} SCOP: b.29.1.3 PDB: 1lcl_A 1qkq_A* 1hdk_A*
Probab=23.25 E-value=54 Score=23.14 Aligned_cols=51 Identities=12% Similarity=0.205 Sum_probs=36.1
Q ss_pred eeEecceeeEEEEeecCCCCCCCCCCcccCCCCCcCeEEEEEEeeeeccccC
Q 030272 129 LSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVNEYKV 180 (180)
Q Consensus 129 ~~v~P~~G~al~f~n~~~~g~~d~~~~H~g~pV~~G~K~~~~~W~~~~~~~~ 180 (180)
+-+.|+-+..|++.+.. +|.....-.+..+|...|.-..+.+.+....|+|
T Consensus 52 lHfnprf~~~IV~Ns~~-~g~Wg~EEr~~~~PF~~G~~F~l~I~~~~~~f~V 102 (142)
T 1g86_A 52 FHFQVCFGRRVVMNSRE-YGAWKQQVESKNMPFQDGQEFELSISVLPDKYQV 102 (142)
T ss_dssp EEEEEETTTEEEEEEEE-TTEECCCEEECCCCCCTTCCEEEEEEECSSEEEE
T ss_pred EEEEEcCCCEEEEeCCc-CCEeeccEEeCCCCccCCCcEEEEEEeCCCEEEE
Confidence 44566656688886654 4544444456688999999999999888877754
No 53
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=21.16 E-value=56 Score=27.10 Aligned_cols=34 Identities=18% Similarity=0.212 Sum_probs=22.9
Q ss_pred CCCCCccccccccCCCCceeEEEEEeecCCCCCcceecCC
Q 030272 68 EPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPN 107 (180)
Q Consensus 68 ~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~ 107 (180)
.+|.|..... ..-.+++|.-+.-+.+||+|.|-.
T Consensus 201 ~~HtD~sy~~------~pp~~~~L~c~~~~~~GG~T~~~d 234 (388)
T 3o2g_A 201 SFHTDYPALH------HPPGVQLLHCIKQTVTGGDSEIVD 234 (388)
T ss_dssp EEECSCTTSS------SCCSEEEEEEEECCSSSCCEEEEE
T ss_pred ccccCCCccC------CCCcEEEEEEEecCCCCCcCeeec
Confidence 4788875432 223456777777778999999954
No 54
>1rie_A Rieske iron-sulfur protein; oxidoreductase, cytochrome BC1 complex, histidine ligands, rieske iron-sulfur cluster, electron transport; 1.50A {Bos taurus} SCOP: b.33.1.1
Probab=20.80 E-value=63 Score=22.33 Aligned_cols=21 Identities=19% Similarity=0.306 Sum_probs=16.3
Q ss_pred eeeEEEEeecCCCCCCCCCCcccCCCCCcC
Q 030272 135 MGDALLFWSMKPDASLDPSSLHGGCPVIKG 164 (180)
Q Consensus 135 ~G~al~f~n~~~~g~~d~~~~H~g~pV~~G 164 (180)
.|....|.| ...|.|||+..|
T Consensus 62 ~g~~~a~~~---------~C~H~g~~l~~g 82 (129)
T 1rie_A 62 KPEWVILIG---------VCTHLGCVPIAN 82 (129)
T ss_dssp STTEEEEEC---------CCTTTSCCCEET
T ss_pred CCeEEEEEC---------ccCCCCeecccc
Confidence 566777766 889999998765
No 55
>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*
Probab=20.33 E-value=66 Score=26.07 Aligned_cols=36 Identities=14% Similarity=0.069 Sum_probs=21.5
Q ss_pred ccCCCCCccccccccCCCCceeEEEEEeecCCCCCcceecCCC
Q 030272 66 KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNA 108 (180)
Q Consensus 66 ~y~~H~D~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~ 108 (180)
...+|.|..... ..-.+++|.-|..+. ||+|.|-..
T Consensus 164 ~l~~HtD~sy~~------~pp~~~~L~cl~~p~-gG~T~~ad~ 199 (358)
T 2wbq_A 164 ELGWHTEDAFSP------YRADYVGLLSLRNPD-GVATTLAGV 199 (358)
T ss_dssp CEEEECTTTTCT------TCCSEEEEEEEECTT-CCEEEEEEC
T ss_pred CccccccCCCCC------CCCCeEEEEeEecCC-CCCceEEec
Confidence 345888865432 122345555555556 999999653
Done!