BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030278
(180 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55909|Y305_SYNY3 TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1
Length = 209
Score = 110 bits (274), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 99/158 (62%), Gaps = 2/158 (1%)
Query: 20 YIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKD 79
Y T++ +P S+LTLG G +FG+ +G + IGAT+GA AAFL+GR + + +V K+
Sbjct: 27 YTVATVVFLPGSILTLGAGVVFGVILGSIYVFIGATLGATAAFLVGRYLARGWVAKKIAG 86
Query: 80 YPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITL 139
+F+++ A+ + G KIV+L RL P+ PFN+LNY +T V L +Y++ S +GM+P T+
Sbjct: 87 NQKFKAIDEAVGKEGLKIVILTRLSPVFPFNLLNYAYGITNVSLKDYVIGS-LGMIPGTI 145
Query: 140 ALVYVGTTLKDLSDVTHGWNEFSKT-RWAFLIFGLVVS 176
VY+G+ L+ + N+ + T +W I G + +
Sbjct: 146 MYVYIGSLAGSLATLGTATNQANPTLQWTIRIVGFIAT 183
>sp|Q3U145|TMM64_MOUSE Transmembrane protein 64 OS=Mus musculus GN=Tmem64 PE=2 SV=1
Length = 381
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Query: 32 VLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQ 91
VL + GYL+G +G +G IG A ++ + + +V +++++ + +V ++
Sbjct: 181 VLNVAAGYLYGFVLGMGLMVVGVLIGTFIAHVVCKRLLTAWVAARIQNSDKLSAVIRVVE 240
Query: 92 R-SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKD 150
SG K+V L RL P+ PF + N + S+T VPL Y++AS G++P L Y+GTTL+
Sbjct: 241 GGSGLKVVALARLTPI-PFGLQNAVFSITDVPLPSYLMASSAGLLPTQLLNSYLGTTLRT 299
Query: 151 LSDV 154
+ DV
Sbjct: 300 MEDV 303
>sp|P76219|YDJX_ECOLI TVP38/TMEM64 family membrane protein YdjX OS=Escherichia coli
(strain K12) GN=ydjX PE=3 SV=2
Length = 236
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 66/117 (56%)
Query: 20 YIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKD 79
+I T+L +P S+L + GG +FG +G + I AT+ + +FLL R +G+ ++ +
Sbjct: 55 FIIATLLLLPGSILVIAGGIVFGPLLGTLLSLIAATLASSCSFLLARWLGRDLLLKYVGH 114
Query: 80 YPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMP 136
F+++ I R+G ++L RL+PL P+N+ NY +T + Y L S + +P
Sbjct: 115 SNTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTTIAFWPYTLISALTTLP 171
>sp|Q6YI46|TMM64_HUMAN Transmembrane protein 64 OS=Homo sapiens GN=TMEM64 PE=1 SV=2
Length = 380
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Query: 32 VLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQ 91
VL + GYL+G +G +G IG A ++ + + +V ++++ + +V ++
Sbjct: 180 VLNVAAGYLYGFVLGMGLMMVGVLIGTFIAHVVCKRLLTAWVAARIQSSEKLSAVIRVVE 239
Query: 92 R-SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKD 150
SG K+V L RL P+ PF + N + S+T + L Y++AS +G++P L Y+GTTL+
Sbjct: 240 GGSGLKVVALARLTPI-PFGLQNAVFSITDLSLPNYLMASSVGLLPTQLLNSYLGTTLRT 298
Query: 151 LSDV 154
+ DV
Sbjct: 299 MEDV 302
>sp|O62126|TM41_CAEEL Transmembrane protein 41 homolog OS=Caenorhabditis elegans
GN=tag-175 PE=3 SV=1
Length = 246
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 9 RFSMVICRA-VAYIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGR 66
+S+V+C V Y+ L A+P S+ LT+ GYLF V V + GA + + +
Sbjct: 66 NYSVVLCGVIVVYVFLQSFAIPGSIFLTILSGYLFPFYVAIVLVCSCSATGAAICYTISK 125
Query: 67 TIGKPFVISKLKDYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLE 125
G+ FV+ K + L+ R F ++ LR+ P++P ++N V VPL
Sbjct: 126 LFGRSFVLQKFPERIAKWQDDLSKHRDDFLNYMIFLRVTPIVPNWLINIASPVLDVPLAP 185
Query: 126 YMLASWIGMMPITLALVYVGTTLKDLSDVTHGWN 159
+ +++G+ P + + G+TL+ LS + W+
Sbjct: 186 FFWGTFLGVAPPSFLYIQAGSTLEQLSHTSVAWS 219
>sp|Q8L586|Y4958_ARATH Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana
GN=At4g09580 PE=1 SV=1
Length = 287
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 9 RFSMVICRAVAYIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRT 67
RF + C YI + +P ++ ++L G LFG+ GFV + AT GA + F L +
Sbjct: 110 RFILGYCST--YIFMQTFMIPGTIFMSLLAGALFGVVRGFVLVVLNATAGACSCFFLSKL 167
Query: 68 IGKPFVISKLKDYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEY 126
+G+P V + +F +A +R +L LR+ P LP +N + +P +
Sbjct: 168 VGRPLVNWLWPEKLRFFQAEIAKRRDRLLNYMLFLRITPTLPNLFINLSSPIVDIPFHVF 227
Query: 127 MLASWIGMMPITLALVYVGTTLKDLSDVTHGWN 159
LA+ +G+MP + V G L DL V ++
Sbjct: 228 FLATLVGLMPASYITVRAGLALGDLRSVKDLYD 260
>sp|A4II98|TM41B_XENTR Transmembrane protein 41B OS=Xenopus tropicalis GN=tmem41b PE=2
SV=1
Length = 278
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 4/158 (2%)
Query: 6 DLVRFSMVICRAVAYIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLL 64
D +++ YI L A+P S+ L++ G+L+ P+ + + +GA ++LL
Sbjct: 94 DTFYVEVLVAYFTTYIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFSYLL 153
Query: 65 GRTIGKPFVISKLKDYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPL 123
+G+P V L D S + R ++ LR+ P LP +N V VPL
Sbjct: 154 SYLVGRPVVYKYLSDKAIKWSQQVERHRDHLINYIIFLRITPFLPNWFINITSPVINVPL 213
Query: 124 LEYMLASWIGMMPITLALVYVGTTLKDLSDVTHG--WN 159
+ L ++IG+ P + + GTTL L+ WN
Sbjct: 214 KVFFLGTFIGVAPPSFVAIKAGTTLYQLTTAGEAVSWN 251
>sp|Q5U4K5|TM41B_XENLA Transmembrane protein 41B OS=Xenopus laevis GN=tmem41b PE=2 SV=1
Length = 278
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 4/158 (2%)
Query: 6 DLVRFSMVICRAVAYIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLL 64
D +++ YI L A+P S+ L++ G+L+ P+ + + +GA +LL
Sbjct: 94 DTFYVEVLVAYFTTYIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYLL 153
Query: 65 GRTIGKPFVISKLKDYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPL 123
+G+P V L D S + R ++ LR+ P LP +N V VPL
Sbjct: 154 SYLVGRPVVYKYLSDKAIKWSQQVERHRDHLINYIIFLRITPFLPNWFINITSPVINVPL 213
Query: 124 LEYMLASWIGMMPITLALVYVGTTLKDLSDVTHG--WN 159
+ L ++IG+ P + + GTTL L+ WN
Sbjct: 214 KVFFLGTFIGVAPPSFVAIKAGTTLYQLTTAGEAVSWN 251
>sp|A1A5V7|TM41B_DANRE Transmembrane protein 41B OS=Danio rerio GN=tmem41b PE=2 SV=1
Length = 282
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
Query: 20 YIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLK 78
YI L A+P S+ L++ GYL+ P+ + + +GA ++L +G+P V L
Sbjct: 112 YIFLQTFAIPGSIFLSILSGYLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPMVYKYLT 171
Query: 79 DYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPI 137
+ Q S + R ++ LR+ P LP +N V VPL + L +++G+ P
Sbjct: 172 ERAQKWSQQVDKHREHLINYIIFLRITPFLPNWFINITSPVINVPLGVFFLGTFLGVAPP 231
Query: 138 TLALVYVGTTLKDLSDVTHG--WN 159
+ + GTTL L+ WN
Sbjct: 232 SFVAINAGTTLYKLTTAGEAVSWN 255
>sp|Q8MXN7|TM41_DICDI Transmembrane protein 41 homolog OS=Dictyostelium discoideum
GN=DDB_G0275543 PE=3 SV=2
Length = 334
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
Query: 6 DLVRFSMVICRAVAYIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLL 64
D F ++ V Y L ++P SV L+ G LFGL VGF AT+GA ++L+
Sbjct: 152 DDNYFIVITTFGVIYTFLQAFSIPGSVFLSFLSGGLFGLKVGFPLVCFVATLGATFSYLI 211
Query: 65 GRTIGKPFVISKLKDYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPL 123
IG+ V D + S +L+ +R ++ LR+ P LP +N + VP+
Sbjct: 212 SYYIGRNLVRKLFPDKLKLFSDSLSQKRDNLLNYIVFLRITPFLPNWFINLASPLLDVPI 271
Query: 124 LEYMLASWIGMMPITLALVYVGTTLKDLSD 153
+ + ++IG+MP T V G ++++ +
Sbjct: 272 HTFAIGTFIGIMPATFLAVKAGIQIQNIQN 301
>sp|Q0CT01|TVP38_ASPTN Golgi apparatus membrane protein tvp38 OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=tvp38 PE=3 SV=1
Length = 418
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 69/118 (58%), Gaps = 3/118 (2%)
Query: 37 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFK 96
GY+FG+ G++ + +G+ A+F++ RTI FV ++ +F ++AL ++ G K
Sbjct: 149 AGYIFGVWKGWLLYASATVLGSTASFIVSRTILSKFVHRLMERDKRFAALALTLKYDGLK 208
Query: 97 IVLLLRLVPLLPFNMLNYLLSVTP-VPLLEYMLASWIGMMPITLALVYVGTTLKDLSD 153
++ ++RL P LP+++ N +S P V L Y LA+ I + P L ++G L+ LS+
Sbjct: 209 LLCMIRLCP-LPYSVCNGAVSTFPTVHPLTYGLATAI-ITPKLLVPAFIGNRLRVLSE 264
>sp|Q5FVN2|TM41B_RAT Transmembrane protein 41B OS=Rattus norvegicus GN=Tmem41b PE=2 SV=1
Length = 291
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 20 YIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLK 78
YI L A+P S+ L++ G+L+ P+ + + +GA ++L +G+P V L
Sbjct: 121 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT 180
Query: 79 DYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPI 137
+ S + R ++ LR+ P LP +N V VPL + + +++G+ P
Sbjct: 181 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP 240
Query: 138 TLALVYVGTTLKDLSDVTHG--WN 159
+ + GTTL L+ WN
Sbjct: 241 SFVAIKAGTTLYQLTTAGEAVSWN 264
>sp|Q5BJD5|TM41B_HUMAN Transmembrane protein 41B OS=Homo sapiens GN=TMEM41B PE=1 SV=1
Length = 291
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 4/159 (2%)
Query: 6 DLVRFSMVICRAVAYIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLL 64
D +++ YI L A+P S+ L++ G+L+ P+ + + +GA ++L
Sbjct: 107 DTFYVQVLVAYFATYIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYML 166
Query: 65 GRTIGKPFVISKLKDYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPL 123
+G+P V L + S + R ++ LR+ P LP +N V VPL
Sbjct: 167 SYLVGRPVVYKYLTEKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPL 226
Query: 124 LEYMLASWIGMMPITLALVYVGTTLKDLSDVTHG--WNE 160
+ + +++G+ P + + GTTL L+ WN
Sbjct: 227 KVFFIGTFLGVAPPSFVAIKAGTTLYQLTTAGEAVSWNS 265
>sp|P67118|Y1528_MYCBO TVP38/TMEM64 family membrane protein Mb1528c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb1528c PE=3 SV=1
Length = 252
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Query: 23 LTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQ 82
+T+ P + TL G LFG VG +G+T A A LL R G + ++ L
Sbjct: 79 VTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATG--WQLNSLVRRRA 136
Query: 83 FRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALV 142
+ ++ G+ +L LRL+P++PF +NY + V +L + A+ G++P T A+V
Sbjct: 137 INRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVV 196
Query: 143 YVG 145
+G
Sbjct: 197 ILG 199
>sp|P67117|Y1491_MYCTU TVP38/TMEM64 family membrane protein Rv1491c/MT1538
OS=Mycobacterium tuberculosis GN=Rv1491c PE=3 SV=1
Length = 252
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Query: 23 LTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQ 82
+T+ P + TL G LFG VG +G+T A A LL R G + ++ L
Sbjct: 79 VTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATG--WQLNSLVRRRA 136
Query: 83 FRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALV 142
+ ++ G+ +L LRL+P++PF +NY + V +L + A+ G++P T A+V
Sbjct: 137 INRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVV 196
Query: 143 YVG 145
+G
Sbjct: 197 ILG 199
>sp|Q5ZIL6|TM41B_CHICK Transmembrane protein 41B OS=Gallus gallus GN=TMEM41B PE=2 SV=1
Length = 269
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 20 YIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLK 78
Y+ L A+P S+ L++ G+L+ P+ + + +GA ++L +G+P V L
Sbjct: 99 YVFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT 158
Query: 79 DYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPI 137
+ S + R ++ LR+ P LP +N V VPL + + +++G+ P
Sbjct: 159 EKAVKWSEQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP 218
Query: 138 TLALVYVGTTLKDLSDVTHG--WN 159
+ + GTTL L+ WN
Sbjct: 219 SFVAIKAGTTLYQLTTAGEAVSWN 242
>sp|Q9VX39|TM41_DROME Transmembrane protein 41 homolog OS=Drosophila melanogaster
GN=CG8408 PE=2 SV=2
Length = 320
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 80/162 (49%), Gaps = 8/162 (4%)
Query: 3 RCFDLVRFSMVICRAVAYIPLTILAVPASV-LTLGGGYLFGLPVGFV----ADSIGATIG 57
R D+ F ++ VAY+ L A+P S+ L++ G+L+ P+ ++GAT+
Sbjct: 132 RYKDMYYFEVMFGVVVAYVFLQTFAIPGSLFLSILLGFLYKFPIALFLICFCSALGATLC 191
Query: 58 AGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLS 117
+ L+GR + + F K ++ + + S F +L LR+ P+LP +N
Sbjct: 192 YTLSNLVGRRLIRHFWPKKTSEWSKHVE---EYRDSLFNYMLFLRMTPILPNWFINLASP 248
Query: 118 VTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWN 159
V VPL + L ++ G+ P ++ + G TL+ ++ + ++
Sbjct: 249 VIGVPLHIFALGTFCGVAPPSVIAIQAGKTLQKMTSSSEAFS 290
>sp|Q8K1A5|TM41B_MOUSE Transmembrane protein 41B OS=Mus musculus GN=Tmem41b PE=2 SV=1
Length = 291
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 20 YIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLK 78
YI L A+P S+ L++ G+L+ P+ + + +GA ++L +G+P V L
Sbjct: 121 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT 180
Query: 79 DYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPI 137
+ S + R ++ LR+ P LP +N V VPL + + +++G+ P
Sbjct: 181 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP 240
Query: 138 TLALVYVGTTLKDLS 152
+ + GTTL L+
Sbjct: 241 SFVAIKAGTTLHQLT 255
>sp|P76221|YDJZ_ECOLI TVP38/TMEM64 family inner membrane protein YdjZ OS=Escherichia coli
(strain K12) GN=ydjZ PE=1 SV=1
Length = 235
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 7/142 (4%)
Query: 7 LVRFSMVICRAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGR 66
+V F ++I +A+A PL PA ++T LFG G + + GA F + R
Sbjct: 65 VVSFLLMILQAIA-APL-----PAFLITFANASLFGAFWGGLLSWTSSMAGAALCFFIAR 118
Query: 67 TIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEY 126
+G+ V+ KL S+ R G +L+ RL+P +PF+ ++Y +T + +
Sbjct: 119 VMGRE-VVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLPFVPFDPISYAAGLTSIRFRSF 177
Query: 127 MLASWIGMMPITLALVYVGTTL 148
+A+ +G +P T+ + G+ L
Sbjct: 178 FIATGLGQLPATIVYSWAGSML 199
>sp|P54449|YQED_BACSU Uncharacterized protein YqeD OS=Bacillus subtilis (strain 168)
GN=yqeD PE=4 SV=1
Length = 208
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 7/153 (4%)
Query: 8 VRFSMVICRAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRT 67
V FSM++ A + P+ VP +++ G +FG G G+ +G F L R
Sbjct: 37 VLFSMLLIAADVFFPI----VPFALIAALNGAVFGTANGIWITLTGSMLGTILLFFLARY 92
Query: 68 IGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYM 127
+ + K++ YP +S + ++ F VLL RL+P++P ++N + ++ V +
Sbjct: 93 SFRDWARKKVQAYPAIQSYEASFNKNAFTAVLLGRLIPVIPSLVMNVICGLSQVRWHVFF 152
Query: 128 LASWIGMMPITLALVYVG---TTLKDLSDVTHG 157
AS IG +P + + G T+ K LS +G
Sbjct: 153 FASLIGKIPNIVVVTIAGANFTSNKLLSISIYG 185
>sp|Q5RBZ8|TM41B_PONAB Transmembrane protein 41B OS=Pongo abelii GN=TMEM41B PE=2 SV=1
Length = 291
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 4/158 (2%)
Query: 6 DLVRFSMVICRAVAYIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLL 64
D +++ YI L A+P S+ L++ G+L+ P+ + + +GA ++L
Sbjct: 107 DTFYVQVLVAYFATYIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYML 166
Query: 65 GRTIGKPFVISKLKDYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPL 123
+G+P V L + S + R ++ LR+ P LP +N V VPL
Sbjct: 167 SYLVGRPVVYKYLTEKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPL 226
Query: 124 LEYMLASWIGMMPITLALVYVGTTLKDLSDVTHG--WN 159
+ + +++G+ P + + GTTL + WN
Sbjct: 227 KVFFIGTFLGVAPPSFVAIKAGTTLHQPTTAGEAVSWN 264
>sp|A7EFY0|TVP38_SCLS1 Golgi apparatus membrane protein tvp38 OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=tvp38 PE=3 SV=1
Length = 393
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 69/124 (55%), Gaps = 4/124 (3%)
Query: 30 ASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALA 89
+S +T+ G +++G+P G+ + G+ +FL RTI +V + +F ++AL
Sbjct: 149 SSTITIAG-FVYGVPKGWAIVATSTVAGSTCSFLASRTILSTYVHRLVGKDKRFEALALT 207
Query: 90 IQRSGFKIVLLLRLVPLLPFNMLNYLLSVTP-VPLLEYMLASWIGMMPITLALVYVGTTL 148
++ G KI+ ++RL P LP+++ N ++ P V L Y LA+ + + P V++G+ L
Sbjct: 208 LKHDGIKILCMIRLCP-LPYSLSNAAVATFPTVHPLNYALATAL-VTPKLFIHVFIGSRL 265
Query: 149 KDLS 152
L+
Sbjct: 266 GSLA 269
>sp|A1CW44|TVP38_NEOFI Golgi apparatus membrane protein tvp38 OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=tvp38 PE=3 SV=1
Length = 418
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 37 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFK 96
G++FG+ G++ + +G+ +F++ RTI FV ++ +F ++AL ++ G K
Sbjct: 148 AGFIFGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTLKYDGLK 207
Query: 97 IVLLLRLVPLLPFNMLNYLLSVTPV--PLLEYMLASWIGMMPITLALVYVGTTLKDLSDV 154
++ ++RL P LP+++ N +S P PL+ Y LA+ + + P L ++G+ ++ LS+
Sbjct: 208 LLCMIRLCP-LPYSVCNGAVSTFPTVHPLM-YGLATAL-ITPKLLVPAFIGSRIRILSEK 264
Query: 155 THGWNEFSK 163
+ SK
Sbjct: 265 NEEMSAGSK 273
>sp|Q2UUJ9|TVP38_ASPOR Golgi apparatus membrane protein tvp38 OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=tvp38 PE=3 SV=2
Length = 414
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 38 GYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKI 97
GY+FG+ G+ + +G+ +F++ RTI FV ++ +F ++AL ++ G K+
Sbjct: 147 GYIFGVWKGWFLYASATVLGSTCSFVVSRTILSKFVNRMMERDKRFAALALTLKYDGLKL 206
Query: 98 VLLLRLVPLLPFNMLNYLLSVTPV--PLLEYMLASWIGMMPITLALVYVGTTLKDLSD 153
+ ++RL P LP+++ N +S P PL+ Y LA+ I + P L +VG+ ++ LS+
Sbjct: 207 LCMIRLCP-LPYSVCNGAVSTFPTVQPLM-YGLATAI-VTPKLLVPAFVGSRIRLLSE 261
>sp|Q4WQJ2|TVP38_ASPFU Golgi apparatus membrane protein tvp38 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=tvp38 PE=3 SV=1
Length = 418
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 37 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFK 96
G+++G+ G++ + +G+ +F++ RTI FV ++ +F ++AL ++ G K
Sbjct: 148 SGFIYGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTLKYDGLK 207
Query: 97 IVLLLRLVPLLPFNMLNYLLSVTPV--PLLEYMLASWIGMMPITLALVYVGTTLKDLSDV 154
++ ++RL P LP+++ N +S P PL+ Y LA+ + + P L ++G+ ++ LS+
Sbjct: 208 LLCMIRLCP-LPYSVCNGAVSTFPTVHPLM-YGLATAL-ITPKLLVPAFIGSRIRILSEK 264
Query: 155 THGWNEFSK 163
+ SK
Sbjct: 265 NEEMSAASK 273
>sp|B0Y4Q5|TVP38_ASPFC Golgi apparatus membrane protein tvp38 OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=tvp38 PE=3
SV=1
Length = 418
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 37 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFK 96
G+++G+ G++ + +G+ +F++ RTI FV ++ +F ++AL ++ G K
Sbjct: 148 SGFIYGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTLKYDGLK 207
Query: 97 IVLLLRLVPLLPFNMLNYLLSVTPV--PLLEYMLASWIGMMPITLALVYVGTTLKDLSDV 154
++ ++RL P LP+++ N +S P PL+ Y LA+ + + P L ++G+ ++ LS+
Sbjct: 208 LLCMIRLCP-LPYSVCNGAVSTFPTVHPLM-YGLATAL-ITPKLLVPAFIGSRIRILSEK 264
Query: 155 THGWNEFSK 163
+ SK
Sbjct: 265 NEEMSAASK 273
>sp|A1CIM4|TVP38_ASPCL Golgi apparatus membrane protein tvp38 OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=tvp38 PE=3 SV=1
Length = 419
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 37 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFK 96
G++FG+ G++ + +G+ +F++ RT+ FV ++ +F ++AL ++ G K
Sbjct: 149 AGFIFGIWKGWLLYATATVLGSTCSFIVSRTVLSKFVNRMMERDKRFAALALTLKYDGLK 208
Query: 97 IVLLLRLVPLLPFNMLNYLLSVTPV--PLLEYMLASWIGMMPITLALVYVGTTLKDLSD 153
++ ++RL P LP+++ N +S P PL+ Y LA+ I + P L ++G+ ++ LS+
Sbjct: 209 LLCMIRLCP-LPYSVCNGAVSTFPTVHPLM-YGLATAI-ITPKLLVPAFIGSRIRILSE 264
>sp|A6RIB9|TVP38_BOTFB Golgi apparatus membrane protein tvp38 OS=Botryotinia fuckeliana
(strain B05.10) GN=tvp38 PE=3 SV=1
Length = 392
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 69/124 (55%), Gaps = 4/124 (3%)
Query: 30 ASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALA 89
+S +T+ G +++G+P G+ + G+ +FL RTI +V + +F ++AL
Sbjct: 148 SSTITIAG-FVYGVPKGWAIVASATVAGSLCSFLASRTILSSYVHRLVGKDKRFEALALT 206
Query: 90 IQRSGFKIVLLLRLVPLLPFNMLNYLLSVTP-VPLLEYMLASWIGMMPITLALVYVGTTL 148
++ G KI+ ++RL P LP+++ N ++ P V L Y LA+ + + P V++G+ L
Sbjct: 207 LKHDGIKILCMIRLCP-LPYSLSNAAVATFPTVHPLNYALATAL-VTPKLFIHVFIGSRL 264
Query: 149 KDLS 152
L+
Sbjct: 265 GSLA 268
>sp|A2Q9P2|TVP38_ASPNC Golgi apparatus membrane protein tvp38 OS=Aspergillus niger (strain
CBS 513.88 / FGSC A1513) GN=tvp38 PE=3 SV=2
Length = 415
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 37 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFK 96
GY+FG+ G++ + +G+ +F++ RTI FV ++ +F +++L ++ G K
Sbjct: 148 AGYIFGIWKGWLLYASATVLGSTCSFIVSRTILSKFVHRLMERDKRFAALSLTLKYDGLK 207
Query: 97 IVLLLRLVPLLPFNMLNYLLSVTPV--PLLEYMLASWIGMMPITLALVYVGTTLKDLSDV 154
++ ++RL P LP+++ N +S P PL+ Y LA+ + + P L ++G L+ LS+
Sbjct: 208 LLCMIRLCP-LPYSVCNGAVSTFPTVQPLM-YGLATAL-ISPKLLVPAFIGNRLRVLSEN 264
Query: 155 THGWNEFSK 163
+ SK
Sbjct: 265 NEEMSAGSK 273
>sp|P06568|YTXB_BACSU TVP38/TMEM64 family membrane protein YtxB OS=Bacillus subtilis
(strain 168) GN=ytxB PE=3 SV=1
Length = 213
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 29 PASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVAL 88
P SV+++ GG FG +G + G+ + +F F K Y + ++
Sbjct: 62 PVSVISIAGGLAFGPLLGTLYTLFGSMCASAVSFFAAGL----FSAKKNGHYERLEAIQK 117
Query: 89 AIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTL 148
++ +GF + LLR++P + F+ ++Y ++ V L Y A+ +G++P T+AL +G +
Sbjct: 118 QMEDNGFFYIFLLRILP-INFDFVSYAAGLSNVKALPYFAATAVGIIPGTIALNVLGASF 176
>sp|O07559|YHJE_BACSU Uncharacterized membrane protein YhjE OS=Bacillus subtilis (strain
168) GN=yhjE PE=4 SV=1
Length = 207
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 19 AYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLK 78
A++P +P V + FGL GF+ G+T G+ FL+ R G+ ++ ++
Sbjct: 37 AFLPF----LPLIVFVVANTNSFGLWEGFILSWAGSTAGSILVFLIVRQYGQRKLLGFIR 92
Query: 79 DYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPIT 138
+P R + L ++R GF + LL P P +N + ++ + ++LA+ G + +
Sbjct: 93 SHPSVRKLMLWVERHGFGPMFLLLCFPFTPSAAVNVVAGLSRIGTRPFILAAASGKLVMI 152
Query: 139 LALVYVGTTLKDL 151
+ ++G L L
Sbjct: 153 FMISFIGYDLHAL 165
>sp|Q5B7A1|TVP38_EMENI Golgi apparatus membrane protein tvp38 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=tvp38 PE=3 SV=1
Length = 410
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 38 GYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKI 97
G++FG+ G++ + +G+ +F+ RT+ FV ++ +F ++AL ++ G K+
Sbjct: 149 GFIFGVWKGWLLYASATVLGSICSFIASRTVLSKFVHRLVERDKRFAALALTLKYDGLKL 208
Query: 98 VLLLRLVPLLPFNMLNYLLSVTP-VPLLEYMLASWIGMMPITLALVYVGTTLKDLSD 153
+ ++RL P LP+++ N +S P V L Y LA+ I + P L ++G+ ++ L++
Sbjct: 209 LCMIRLCP-LPYSICNGAISTFPTVQPLMYGLATAI-ISPKLLVPAFIGSRIRILNE 263
>sp|Q6BQJ1|TVP38_DEBHA Golgi apparatus membrane protein TVP38 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=TVP38 PE=3 SV=1
Length = 383
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 SVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 90
S L++ G ++G G++ + + G+ +FL+ R + + +FR+ + +
Sbjct: 118 SALSMLAGMVYGFVHGWILLACASISGSFCSFLVFRYLLHSRAERLMNSNKKFRAFSEIL 177
Query: 91 -QRSGFKIVLLLRLVPLLPFNMLNYLLSVTP-VPLLEYMLASWIGMMPITLALVYVGTTL 148
+ S I++LLRL PL P+++ N L+ P +P Y LAS I P + ++VG L
Sbjct: 178 REDSSLFILVLLRLCPL-PYSLSNGALAAIPELPATTYFLASLI-TSPKLMIHIFVGHKL 235
Query: 149 KDLSDVTHGWNEFSKTRWAFLIFGLVVSG 177
K+L D T G K+ I ++++G
Sbjct: 236 KELGDDTKG-----KSTHLIDILSIIITG 259
>sp|Q96HV5|TM41A_HUMAN Transmembrane protein 41A OS=Homo sapiens GN=TMEM41A PE=2 SV=1
Length = 264
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 19 AYIPLTILAVP-ASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKL 77
AY+ A+P +S L + G LFG +G + + ++GA +LL GK V+S
Sbjct: 76 AYLYKQGFAIPGSSFLNVLAGALFGPWLGLLLCCVLTSVGATCCYLLSSIFGKQLVVSYF 135
Query: 78 KDYPQFRSVALAIQR-SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMP 136
D + R S F +L LRL P+ P LN + +P++++ + IG++P
Sbjct: 136 PDKVALLQRKVEENRNSLFFFLLFLRLFPMTPNWFLNLSAPILNIPIVQFFFSVLIGLIP 195
Query: 137 ITLALVYVGTTLKDLS--DVTHGWN 159
V G+ L L+ D W+
Sbjct: 196 YNFICVQTGSILSTLTSLDALFSWD 220
>sp|Q9D8U2|TM41A_MOUSE Transmembrane protein 41A OS=Mus musculus GN=Tmem41a PE=2 SV=1
Length = 264
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 4/145 (2%)
Query: 19 AYIPLTILAVP-ASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKL 77
AY+ A+P +S L + G LFG +G + + ++GA +LL GK VIS
Sbjct: 76 AYLYKQGFAIPGSSFLNVLAGALFGPWLGLLLCCVLTSVGATGCYLLSSLFGKQLVISYF 135
Query: 78 KDYPQFRSVALAIQR-SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMP 136
D + R S F +L LRL P+ P LN + +P++++ + IG++P
Sbjct: 136 PDKVALLQKKVEENRNSLFFFLLFLRLFPMTPNWFLNLSAPILNIPIVQFFFSVLIGLIP 195
Query: 137 ITLALVYVGTTLKDLS--DVTHGWN 159
V G+ L L+ D W
Sbjct: 196 YNFICVQTGSILSTLTSLDALFSWE 220
>sp|Q08D99|TM41A_BOVIN Transmembrane protein 41A OS=Bos taurus GN=TMEM41A PE=2 SV=1
Length = 264
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 4/145 (2%)
Query: 19 AYIPLTILAVP-ASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKL 77
AY+ A+P +S L + G LFG +G + + ++GA +LL GK V+
Sbjct: 76 AYLYKQSFAIPGSSFLNVLAGALFGPWLGLLLCCVLTSVGATGCYLLSSVFGKQLVVFYF 135
Query: 78 KDYPQFRSVALAIQRSGFKIVLLLRL-VPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMP 136
D + R+G LL P+ P LN + +P++++ + IG++P
Sbjct: 136 PDKVALLQKKVEENRNGLFFFLLFLRLFPMTPNWFLNLSAPILNIPIVQFFFSVLIGLIP 195
Query: 137 ITLALVYVGTTLKDLS--DVTHGWN 159
V G+ L L+ D W
Sbjct: 196 YNFICVQTGSILSTLTSLDALFSWE 220
>sp|Q502G2|T41AA_DANRE Transmembrane protein 41A-A OS=Danio rerio GN=tmem41aa PE=2 SV=1
Length = 281
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 12/143 (8%)
Query: 19 AYIPLTILAVP-ASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKL 77
AY+ A+P +S L + G LFG G + + T+GA FLL + GK ++
Sbjct: 93 AYLYKQAFAIPGSSFLNILAGALFGTWFGLLLTCVLTTVGATLCFLLSQAFGKHHIVKLF 152
Query: 78 KDYPQFRSVALAIQR------SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASW 131
D VA+ ++ S F +L LR P+ P LN + +P+ + +A +
Sbjct: 153 PD-----KVAMLQKKVEENRSSLFFFLLFLRFFPMSPNWFLNMTSPILNIPVTLFFMAVF 207
Query: 132 IGMMPITLALVYVGTTLKDLSDV 154
IG+MP V G+ L +S +
Sbjct: 208 IGLMPYNFICVQTGSMLSQISSL 230
>sp|P67116|Y641_MYCBO TVP38/TMEM64 family membrane protein Mb0641c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb0641c PE=3 SV=1
Length = 246
Score = 37.4 bits (85), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 23 LTILAVPASVLTLGGGYLFGLPVG-FVADSIGATIG-AGAAFLLGRTIGKPFVISKLKDY 80
L L VP +L G LFG VG FV ++GAT+G A A L+GR G+ + L
Sbjct: 66 LGALFVPGPILAASSGLLFGPLVGVFV--TLGATVGTAVVASLVGRRAGRASARALLGGE 123
Query: 81 PQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLA 140
R+ AL I+R G V+ R VP + +Y VPL + + ++IG P A
Sbjct: 124 RADRTDAL-IERCGLWAVVGQRFVPGISDAFASYAFGTFGVPLWQMAVGAFIGSAPRAFA 182
Query: 141 LVYVGTTLKDLS 152
+G + D S
Sbjct: 183 YTALGAAIGDRS 194
>sp|P67115|Y625_MYCTU TVP38/TMEM64 family membrane protein Rv0625c/MT0653
OS=Mycobacterium tuberculosis GN=Rv0625c PE=3 SV=1
Length = 246
Score = 37.4 bits (85), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 23 LTILAVPASVLTLGGGYLFGLPVG-FVADSIGATIG-AGAAFLLGRTIGKPFVISKLKDY 80
L L VP +L G LFG VG FV ++GAT+G A A L+GR G+ + L
Sbjct: 66 LGALFVPGPILAASSGLLFGPLVGVFV--TLGATVGTAVVASLVGRRAGRASARALLGGE 123
Query: 81 PQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLA 140
R+ AL I+R G V+ R VP + +Y VPL + + ++IG P A
Sbjct: 124 RADRTDAL-IERCGLWAVVGQRFVPGISDAFASYAFGTFGVPLWQMAVGAFIGSAPRAFA 182
Query: 141 LVYVGTTLKDLS 152
+G + D S
Sbjct: 183 YTALGAAIGDRS 194
>sp|O31823|YNGC_BACSU Uncharacterized membrane protein YngC OS=Bacillus subtilis (strain
168) GN=yngC PE=3 SV=1
Length = 198
Score = 36.6 bits (83), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 21 IPLTILAVPASVLTLGGGYL-----FGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVIS 75
I L I +P+ ++ GGY+ G +A IG TI + +GR G+PF +
Sbjct: 22 IGLMIEIIPSEIVLAYGGYMVSEGTIGFIGAIIAGVIGGTIAQIFIYWIGRYGGRPF-LD 80
Query: 76 KLKDYPQFRSVALAI-----QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLAS 130
K Y + + + Q+ G +V R +P++ + ++ + +P L++++ +
Sbjct: 81 KYGKYLLIKKHHIDMSENWFQKYGAGVVFSARFIPVVR-HAISIPAGIARMPFLKFVVLT 139
Query: 131 WIGMMPITLALVYVGTTLKDLSD 153
+ ++P ++ VY+G L D
Sbjct: 140 VLAIIPWSILFVYLGIQLGSQWD 162
>sp|Q759P7|TVP38_ASHGO Golgi apparatus membrane protein TVP38 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=TVP38 PE=3 SV=1
Length = 307
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Query: 31 SVLTLGGGYLFGLPV-GFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALA 89
S+L G ++G+ G++ S+G +G+ AAF + +T+ + + ++ +F ++A
Sbjct: 132 SMLCTSAGLVYGVSFKGWLIISLGTVLGSIAAFSVFKTVFRSYAERLIRLNDKFEALASI 191
Query: 90 IQ-RSGFKIVLLLRLVPLLPFNMLNYLLS-VTPVPLLEYMLASWIGMMPITLALVYVGTT 147
+Q + + I+ LLRL P P+++ N ++ V + + + +A + P +++G+
Sbjct: 192 LQDHNSYWIIALLRLCP-FPYSLTNGAIAGVYGISIRNFSIAQ-VLTTPKLFMYLFIGSR 249
Query: 148 LKDLSDVT 155
LK+L + +
Sbjct: 250 LKNLGESS 257
>sp|Q6NV38|T41AB_DANRE Transmembrane protein 41A-B OS=Danio rerio GN=tmem41ab PE=2 SV=1
Length = 278
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 14/144 (9%)
Query: 19 AYIPLTILAVP-ASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKL 77
AY+ A+P +S L + G LFG G + T+G+ +LL RT GK ++
Sbjct: 87 AYLYKQSFAIPGSSFLNMLSGALFGPLHGLIIACTLTTVGSTNCYLLSRTFGKRHIV--- 143
Query: 78 KDYPQFRSVALAIQR-------SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLAS 130
+ +P+ VA+ +QR S F +L LR P+ P LN + +P+ + +
Sbjct: 144 RLFPE--KVAM-LQRMVEENRSSLFFFLLFLRFFPMTPNWFLNVTSPILNIPIPIFFFSI 200
Query: 131 WIGMMPITLALVYVGTTLKDLSDV 154
IG++P V+ G L +++ +
Sbjct: 201 LIGLIPYNFICVHTGAVLSEINSL 224
>sp|Q57819|Y374_METJA Uncharacterized protein MJ0374 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0374 PE=4 SV=1
Length = 330
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 8/143 (5%)
Query: 18 VAYIPLTILAVPASVLTLGGGYLFGLP--VGFVADSIGATIGAGAAFLLGRTIGKPFVIS 75
+++ I +P V +G + FGL + + +IG T+G + LG +G P I
Sbjct: 28 ISFTEAFIQPIPPDVFIIGASF-FGLNPIISAIVATIGTTLGGLFGYFLGDKLGHPIFI- 85
Query: 76 KLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMM 135
KL + G V++ PL P+ ++ +L + + L + + + IG +
Sbjct: 86 KLFGEKYLHKGEEFFNKYGVYGVVIAGFSPL-PYKVIAWLSGIFEMHKLLFTVGTIIGRL 144
Query: 136 PITLALVYVGTTLKD---LSDVT 155
P LA+ Y G L + LSD+
Sbjct: 145 PRFLAVAYFGDVLGNINRLSDIN 167
>sp|A5DH87|TVP38_PICGU Golgi apparatus membrane protein TVP38 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=TVP38 PE=3 SV=2
Length = 349
Score = 34.7 bits (78), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 10/128 (7%)
Query: 31 SVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGR----TIGKPFVISKLKDYPQFRSV 86
S L+L G ++G P G+ + + G+ AFL+ R + G+ V S K FR+
Sbjct: 110 SALSLLAGMVYGFPYGWPLLASASVSGSFVAFLVFRYFLRSQGERLVNSNEK----FRAF 165
Query: 87 ALAIQR-SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVG 145
A ++ S +++L+RL PL P+++ N L+ P L + + P L ++VG
Sbjct: 166 AEILREDSSLFLLVLIRLCPL-PYSLSNGALAAIPELSAWVYLGASVITSPKMLIHLFVG 224
Query: 146 TTLKDLSD 153
+K+ D
Sbjct: 225 HKIKEFGD 232
>sp|Q94AD8|FBW3_ARATH F-box/WD-40 repeat-containing protein At5g21040 OS=Arabidopsis
thaliana GN=At5g21040 PE=2 SV=1
Length = 539
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 103 LVPLLPFNML-NYLLSVTPVPLLEYMLASWIGMM-PITLALVY-VGTTLKDLSDVTHGWN 159
LVP +L + LS T + L + +++ + + P L LV V T L L+ H W
Sbjct: 50 LVPSGSKQLLSDKDLSTTIIDLPQALISEILNCLDPKELGLVSCVSTYLHRLASEHHAWK 109
Query: 160 EFSKTRWAF-LIFGLVVSG 177
EF + RW ++FG SG
Sbjct: 110 EFYRERWGLPVVFGAASSG 128
>sp|Q9JZ36|FTSK1_NEIMB DNA translocase FtsK 1 OS=Neisseria meningitidis serogroup B
(strain MC58) GN=ftsK1 PE=3 SV=1
Length = 812
Score = 31.6 bits (70), Expect = 3.0, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 17 AVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRT 67
A A LT+ + LGG Y LPVG +G +GA A+LLG++
Sbjct: 158 AAALFVLTVFSPVLEYFVLGGKYADSLPVG-AGGMVGIRVGAVFAWLLGKS 207
>sp|Q9JU31|FTSK1_NEIMA DNA translocase FtsK 1 OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=ftsK1 PE=3 SV=2
Length = 812
Score = 31.6 bits (70), Expect = 3.0, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 17 AVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRT 67
A A LT+ + LGG Y LPVG +G +GA A+LLG++
Sbjct: 158 AAALFVLTVFSPVLEYFVLGGKYADSLPVG-AGGMVGIRVGAVFAWLLGKS 207
>sp|P36164|TVP38_YEAST Golgi apparatus membrane protein TVP38 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TVP38 PE=1 SV=1
Length = 337
Score = 30.8 bits (68), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 78/145 (53%), Gaps = 9/145 (6%)
Query: 12 MVICRAVAYIPLTILAVPASVLTLGGGYLFGLPV-GFVADSIGATIGAGAAFLLGRTIGK 70
MV+ VA+ P+ + S+L+ G ++G+ G+V ++G+ G+ A+F++ +TI
Sbjct: 141 MVLIFFVAFPPM----IGYSLLSTTTGLIYGVSFEGWVTLALGSVTGSIASFVVFKTILH 196
Query: 71 PFVISKLKDYPQFRSVALAIQRSG-FKIVLLLRLVPLLPFNMLNYLLS-VTPVPLLEYML 128
+ +F ++A +Q + + I+ LLRL P P+++ N ++ V + + + +
Sbjct: 197 SRAEKLVHLNRRFEALASILQENNSYWILALLRLCP-FPYSLTNGAIAGVYGISVRNFSI 255
Query: 129 ASWIGMMPITLALVYVGTTLKDLSD 153
A+ I P +++G+ +K L++
Sbjct: 256 ANII-TTPKLFIYLFIGSRVKSLAE 279
>sp|A7A047|TVP38_YEAS7 Golgi apparatus membrane protein TVP38 OS=Saccharomyces cerevisiae
(strain YJM789) GN=TVP38 PE=3 SV=1
Length = 337
Score = 30.8 bits (68), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 78/145 (53%), Gaps = 9/145 (6%)
Query: 12 MVICRAVAYIPLTILAVPASVLTLGGGYLFGLPV-GFVADSIGATIGAGAAFLLGRTIGK 70
MV+ VA+ P+ + S+L+ G ++G+ G+V ++G+ G+ A+F++ +TI
Sbjct: 141 MVLIFFVAFPPM----IGYSLLSTTTGLIYGVSFEGWVTLALGSVTGSIASFVVFKTILH 196
Query: 71 PFVISKLKDYPQFRSVALAIQRSG-FKIVLLLRLVPLLPFNMLNYLLS-VTPVPLLEYML 128
+ +F ++A +Q + + I+ LLRL P P+++ N ++ V + + + +
Sbjct: 197 SRAEKLVHLNRRFEALASILQENNSYWILALLRLCP-FPYSLTNGAIAGVYGISVRNFSI 255
Query: 129 ASWIGMMPITLALVYVGTTLKDLSD 153
A+ I P +++G+ +K L++
Sbjct: 256 ANII-TTPKLFIYLFIGSRVKSLAE 279
>sp|Q2FPJ8|RL30E_METHJ 50S ribosomal protein L30e OS=Methanospirillum hungatei (strain
JF-1 / DSM 864) GN=rpl30e PE=3 SV=1
Length = 95
Score = 30.8 bits (68), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 17/64 (26%)
Query: 38 GYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKI 97
GYL G D + G+ LGR GKPF++S ALAI+ SG
Sbjct: 47 GYLSG------KDGVKTYTYEGSGVQLGRACGKPFIVS-----------ALAIEESGDSD 89
Query: 98 VLLL 101
+L L
Sbjct: 90 ILTL 93
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.146 0.446
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,681,811
Number of Sequences: 539616
Number of extensions: 2549375
Number of successful extensions: 9056
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 8982
Number of HSP's gapped (non-prelim): 70
length of query: 180
length of database: 191,569,459
effective HSP length: 110
effective length of query: 70
effective length of database: 132,211,699
effective search space: 9254818930
effective search space used: 9254818930
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 57 (26.6 bits)