BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030283
(180 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255574381|ref|XP_002528104.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223532493|gb|EEF34283.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 171
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/151 (75%), Positives = 128/151 (84%), Gaps = 7/151 (4%)
Query: 1 MKGAKGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
MK +KG GAA+ S++ALKP +DRKVGKRKAA A +D SK + KREKKAKKDPNKPKRPP
Sbjct: 1 MKNSKGTGAAKASKDALKPADDRKVGKRKAAAA-VDRSSKLKAKREKKAKKDPNKPKRPP 59
Query: 60 SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKK 119
SAFFVFLEEFRKTFKKENP+VT+V+AVGKA G KWKSMS AEKAPYE+KA K K EYGK
Sbjct: 60 SAFFVFLEEFRKTFKKENPSVTSVAAVGKAGGAKWKSMSSAEKAPYEAKAAKKKDEYGKL 119
Query: 120 MNAYNKKQ-----DGDEASDKSKSEVNDEDE 145
MNAYNKKQ DG+E SD+SKSEVNDED+
Sbjct: 120 MNAYNKKQESTADDGEEESDRSKSEVNDEDD 150
>gi|449461783|ref|XP_004148621.1| PREDICTED: high mobility group B protein 1-like [Cucumis sativus]
Length = 169
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/152 (71%), Positives = 123/152 (80%), Gaps = 6/152 (3%)
Query: 1 MKGAKGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
MKG+KGKG +RVS+EALKP +DRKVGKRKA K D G KR K++ KAKKDPNKPKRPP
Sbjct: 1 MKGSKGKGTSRVSKEALKPVDDRKVGKRKAVV-KADKGIKRPTKKDLKAKKDPNKPKRPP 59
Query: 60 SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKK 119
SAFFVFLEEFRK +K+ENPNV AVSAVGKA G KWKS+S AEKAPYE+KA K K+EY K
Sbjct: 60 SAFFVFLEEFRKEYKRENPNVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKRKAEYEKL 119
Query: 120 MNAYNKKQDG----DEASDKSKSEVNDEDEAS 147
M AY+ K+ DE S++SKSEVNDEDEAS
Sbjct: 120 MRAYDSKKVASAADDEESERSKSEVNDEDEAS 151
>gi|297819892|ref|XP_002877829.1| hypothetical protein ARALYDRAFT_323737 [Arabidopsis lyrata subsp.
lyrata]
gi|297323667|gb|EFH54088.1| hypothetical protein ARALYDRAFT_323737 [Arabidopsis lyrata subsp.
lyrata]
Length = 185
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/151 (70%), Positives = 123/151 (81%), Gaps = 5/151 (3%)
Query: 1 MKGAKGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
MK AKGK + ++EALKP +DRKVGKRKA K +KR+ ++EKKAKKDPNKPKR P
Sbjct: 1 MKTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEK---ATKRETRKEKKAKKDPNKPKRAP 57
Query: 60 SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKK 119
SAFFVFLE+FR TFKKENPNV AVSAVGKA G KWKSMS AEKAPYE KA K K+EY K+
Sbjct: 58 SAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQ 117
Query: 120 MNAYNKK-QDGDEASDKSKSEVNDEDEASGE 149
M+AYNK ++G + S+KS+SEVNDEDEASGE
Sbjct: 118 MDAYNKNMEEGSDESEKSRSEVNDEDEASGE 148
>gi|42572635|ref|NP_974413.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|222423104|dbj|BAH19531.1| AT3G51880 [Arabidopsis thaliana]
gi|332645335|gb|AEE78856.1| high mobility group protein B1 [Arabidopsis thaliana]
Length = 185
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/151 (69%), Positives = 123/151 (81%), Gaps = 5/151 (3%)
Query: 1 MKGAKGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
MK AKGK + ++EALKP +DRKVGKRKA K +KR+ ++EKKAKKDPNKPKR P
Sbjct: 1 MKTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEK---PTKRETRKEKKAKKDPNKPKRAP 57
Query: 60 SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKK 119
SAFFVFLE+FR TFKKENPNV AVSAVGKA G KWKSMS AEKAPYE KA K K+EY K+
Sbjct: 58 SAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQ 117
Query: 120 MNAYNKK-QDGDEASDKSKSEVNDEDEASGE 149
M+AYNK ++G + S+KS+SE+NDEDEASGE
Sbjct: 118 MDAYNKNLEEGSDESEKSRSEINDEDEASGE 148
>gi|15231065|ref|NP_190756.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|145332807|ref|NP_001078269.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|75274976|sp|O49595.1|HMGB1_ARATH RecName: Full=High mobility group B protein 1; AltName: Full=High
mobility group protein A; Short=AtHMGalpha; Short=HMG
alpha; AltName: Full=Nucleosome/chromatin assembly
factor group D 01; Short=Nucleosome/chromatin assembly
factor group D 1
gi|2832357|emb|CAA74400.1| HMG protein [Arabidopsis thaliana]
gi|3068715|gb|AAC14415.1| unknown [Arabidopsis thaliana]
gi|15912191|gb|AAL08229.1| At3g51880/ORF13 [Arabidopsis thaliana]
gi|21360557|gb|AAM47475.1| At3g51880/ORF13 [Arabidopsis thaliana]
gi|332645334|gb|AEE78855.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|332645336|gb|AEE78857.1| high mobility group protein B1 [Arabidopsis thaliana]
Length = 178
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/150 (69%), Positives = 122/150 (81%), Gaps = 5/150 (3%)
Query: 1 MKGAKGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
MK AKGK + ++EALKP +DRKVGKRKA K +KR+ ++EKKAKKDPNKPKR P
Sbjct: 1 MKTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEK---PTKRETRKEKKAKKDPNKPKRAP 57
Query: 60 SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKK 119
SAFFVFLE+FR TFKKENPNV AVSAVGKA G KWKSMS AEKAPYE KA K K+EY K+
Sbjct: 58 SAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQ 117
Query: 120 MNAYNKK-QDGDEASDKSKSEVNDEDEASG 148
M+AYNK ++G + S+KS+SE+NDEDEASG
Sbjct: 118 MDAYNKNLEEGSDESEKSRSEINDEDEASG 147
>gi|312281849|dbj|BAJ33790.1| unnamed protein product [Thellungiella halophila]
Length = 185
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/143 (67%), Positives = 115/143 (80%), Gaps = 5/143 (3%)
Query: 1 MKGAKGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
MK AKGK + ++E LKP +DRKVGKRKA AK +KR+ ++EK+AKKDPNKPKR P
Sbjct: 1 MKTAKGKDKVKTTKETLKPVDDRKVGKRKAPAAK---ATKRETRKEKRAKKDPNKPKRAP 57
Query: 60 SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKK 119
SAFFVFLE+FR+TFKKENPNV AVSAVGKA G KWKSMS AEKAPYE KA K K+EY K
Sbjct: 58 SAFFVFLEDFRQTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKL 117
Query: 120 MNAYNKK-QDGDEASDKSKSEVN 141
M+AYNK ++G + S+KS+SEVN
Sbjct: 118 MDAYNKNMEEGSDESEKSRSEVN 140
>gi|334185909|ref|NP_001190062.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|332645337|gb|AEE78858.1| high mobility group protein B1 [Arabidopsis thaliana]
Length = 161
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/143 (67%), Positives = 115/143 (80%), Gaps = 5/143 (3%)
Query: 1 MKGAKGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
MK AKGK + ++EALKP +DRKVGKRKA K +KR+ ++EKKAKKDPNKPKR P
Sbjct: 1 MKTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEK---PTKRETRKEKKAKKDPNKPKRAP 57
Query: 60 SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKK 119
SAFFVFLE+FR TFKKENPNV AVSAVGKA G KWKSMS AEKAPYE KA K K+EY K+
Sbjct: 58 SAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQ 117
Query: 120 MNAYNKK-QDGDEASDKSKSEVN 141
M+AYNK ++G + S+KS+SE+N
Sbjct: 118 MDAYNKNLEEGSDESEKSRSEIN 140
>gi|351725417|ref|NP_001235556.1| uncharacterized protein LOC100305961 [Glycine max]
gi|255627113|gb|ACU13901.1| unknown [Glycine max]
Length = 169
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 108/152 (71%), Positives = 119/152 (78%), Gaps = 7/152 (4%)
Query: 1 MKGAKGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
MK AKGKGAAR S+E+LKP +DRKVGKRKA+ S R K+EKKAKKDPNKPKRPP
Sbjct: 1 MKTAKGKGAARPSKESLKPVDDRKVGKRKASGKPEKS---RAPKKEKKAKKDPNKPKRPP 57
Query: 60 SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKK 119
SAF VFLEEFRKTFK ENP V AVS VGKA G KWKS+S AEKAPYE+KA K K+EY K
Sbjct: 58 SAFLVFLEEFRKTFKAENPLVKAVSVVGKAGGEKWKSLSSAEKAPYEAKAAKRKAEYEKL 117
Query: 120 MNAYNKKQDG---DEASDKSKSEVNDEDEASG 148
+ AY KKQ D+ SDKSKSEVNDED+ASG
Sbjct: 118 IKAYEKKQASSADDDESDKSKSEVNDEDDASG 149
>gi|224112525|ref|XP_002316220.1| high mobility group family [Populus trichocarpa]
gi|222865260|gb|EEF02391.1| high mobility group family [Populus trichocarpa]
Length = 176
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/158 (63%), Positives = 114/158 (72%), Gaps = 15/158 (9%)
Query: 1 MKGAKGKGAARV-SQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
MK AKGKG AR +E L P DRK+GKRKAA K + SK++ K+EK KKDPNKPKRP
Sbjct: 1 MKIAKGKGTARTEKKEVLLPVEDRKIGKRKAAL-KANESSKKRVKKEKITKKDPNKPKRP 59
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
PSAFFVFLEEFRK +K+E+PNV AVSAVGKA G KWKS+S AEKAPYE+KA K KS+Y K
Sbjct: 60 PSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSAAEKAPYEAKAAKRKSDYEK 119
Query: 119 KMNAYNKKQ------------DGDEASDKSKSEVNDED 144
M AYNKKQ D E S KSKSEVN ++
Sbjct: 120 LMTAYNKKQDTDDGDDDDNDDDNIEQSHKSKSEVNGQN 157
>gi|407971018|ref|NP_001238631.1| uncharacterized protein LOC100499704 [Glycine max]
gi|255625939|gb|ACU13314.1| unknown [Glycine max]
Length = 166
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/145 (72%), Positives = 114/145 (78%), Gaps = 7/145 (4%)
Query: 1 MKGAKGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
MK AKGKGAAR S+E+LKP +DRKVGKRKA+ G K+EKKAKKDPNKPKRPP
Sbjct: 1 MKNAKGKGAARASKESLKPVDDRKVGKRKASG---KPGRSSAPKKEKKAKKDPNKPKRPP 57
Query: 60 SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKK 119
SAFFVFLEEFRKTFK ENPNV AVS VGKA G KWKS+S AEKAPYESKA K K+EY K
Sbjct: 58 SAFFVFLEEFRKTFKAENPNVKAVSVVGKAGGEKWKSLSSAEKAPYESKAAKRKAEYEKL 117
Query: 120 MNAYNKKQDG---DEASDKSKSEVN 141
+ AY+KKQ DE SDKSKSEVN
Sbjct: 118 IKAYDKKQASSADDEESDKSKSEVN 142
>gi|224098541|ref|XP_002311212.1| high mobility group family [Populus trichocarpa]
gi|222851032|gb|EEE88579.1| high mobility group family [Populus trichocarpa]
Length = 179
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/163 (59%), Positives = 116/163 (71%), Gaps = 16/163 (9%)
Query: 1 MKGAKGKGAARVSQE--ALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
MK AKGKGAAR ++ +L DRK+GKRKAA +S KR K EK KKDP+KPKRP
Sbjct: 1 MKTAKGKGAARTEKKEVSLPVEDRKIGKRKAALKATESSKKRAAK-EKITKKDPDKPKRP 59
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
PS+FFVFLEEFRK +K+E+PN+ AVSAVGKA G KWKSMS AEKAPYE+KA KS+YGK
Sbjct: 60 PSSFFVFLEEFRKIYKQEHPNMKAVSAVGKAGGEKWKSMSAAEKAPYEAKAAIKKSDYGK 119
Query: 119 KMNAYNKKQDGDEA----------SDKSKSEV---NDEDEASG 148
M AY+KKQ+ D+ S +SKSEV +D DE+ G
Sbjct: 120 LMTAYSKKQETDDGGADEEDDYKHSHRSKSEVDGQDDSDESVG 162
>gi|118484946|gb|ABK94338.1| unknown [Populus trichocarpa]
Length = 171
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 115/158 (72%), Gaps = 13/158 (8%)
Query: 1 MKGAKGKGAARVSQE--ALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
MK AKGKGAAR ++ +L DRK+GKRKAA +S KR K EK KKDP+KPKRP
Sbjct: 1 MKTAKGKGAARTEKKEVSLPVEDRKIGKRKAALKATESSKKRAAK-EKITKKDPDKPKRP 59
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
PS+FFVFLEEFRK +K+E+PN+ AVSAVGKA G KWKSMS AEKAPYE+KA KS+YGK
Sbjct: 60 PSSFFVFLEEFRKIYKQEHPNMKAVSAVGKAGGEKWKSMSAAEKAPYEAKAAIKKSDYGK 119
Query: 119 KMNAYNKKQDGDEA----------SDKSKSEVNDEDEA 146
M AY+KKQ+ D+ S +SKSEV+ +D++
Sbjct: 120 LMTAYSKKQETDDGGADEEDDYKHSHRSKSEVDGQDDS 157
>gi|225448398|ref|XP_002269398.1| PREDICTED: high mobility group B protein 1 isoform 1 [Vitis
vinifera]
gi|147854340|emb|CAN83423.1| hypothetical protein VITISV_023376 [Vitis vinifera]
Length = 166
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/148 (67%), Positives = 115/148 (77%), Gaps = 8/148 (5%)
Query: 1 MKGAKGKGAARV-SQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
MK KGK AAR +EALKP DR++GKRKAA K D +K+ K+EK AKKDPNKPKRP
Sbjct: 1 MKVTKGKAAARKDKKEALKPVEDRRLGKRKAAL-KADKSTKKLAKKEKLAKKDPNKPKRP 59
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
PSAFFVFLEEFRK +K+E+PNV AVSAVGKA G KWKS+S A+KAPYE+KA K KS+Y K
Sbjct: 60 PSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAAKRKSDYEK 119
Query: 119 KMNAYNKKQ-----DGDEASDKSKSEVN 141
M AYNKKQ D +E SD+SKSEVN
Sbjct: 120 LMAAYNKKQESMADDDEEESDRSKSEVN 147
>gi|388497798|gb|AFK36965.1| unknown [Medicago truncatula]
Length = 170
Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 105/149 (70%), Positives = 119/149 (79%), Gaps = 8/149 (5%)
Query: 5 KGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFF 63
KGKG A+ S++ALKP +DRKVGKRKAA AK + K + +EKKAKKDPNKPKRPPSAFF
Sbjct: 3 KGKGTAKTSRDALKPVDDRKVGKRKAA-AKPEKVPKTK--KEKKAKKDPNKPKRPPSAFF 59
Query: 64 VFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
VFLE+FRKTFK ENPNV AVSAVGKA GGKWKS++ AEKAPYE+KA K K EY K M+AY
Sbjct: 60 VFLEDFRKTFKAENPNVKAVSAVGKAGGGKWKSLTKAEKAPYEAKAVKRKVEYEKLMDAY 119
Query: 124 NKK----QDGDEASDKSKSEVNDEDEASG 148
N K D +E SDK SEVN+EDEASG
Sbjct: 120 NNKPSSADDDEEESDKDNSEVNNEDEASG 148
>gi|357506009|ref|XP_003623293.1| HMG1/2-like protein [Medicago truncatula]
gi|355498308|gb|AES79511.1| HMG1/2-like protein [Medicago truncatula]
gi|388511215|gb|AFK43669.1| unknown [Medicago truncatula]
Length = 170
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/149 (70%), Positives = 118/149 (79%), Gaps = 8/149 (5%)
Query: 5 KGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFF 63
KGKG A+ S++ALKP +DRKVGKRKAA AK + K + +EKKAKKDPNKPKRPPSAFF
Sbjct: 3 KGKGTAKTSRDALKPVDDRKVGKRKAA-AKPEKVPKTK--KEKKAKKDPNKPKRPPSAFF 59
Query: 64 VFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
VFLE+FRKTFK ENPNV AVSAVGKA G KWKS++ AEKAPYE+KA K K EY K MNAY
Sbjct: 60 VFLEDFRKTFKAENPNVKAVSAVGKAGGEKWKSLTKAEKAPYEAKAAKRKVEYEKLMNAY 119
Query: 124 NKK----QDGDEASDKSKSEVNDEDEASG 148
N K D +E SDK SEVN+EDEASG
Sbjct: 120 NNKPSSADDDEEESDKDNSEVNNEDEASG 148
>gi|388522261|gb|AFK49192.1| unknown [Lotus japonicus]
Length = 173
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/155 (65%), Positives = 116/155 (74%), Gaps = 11/155 (7%)
Query: 5 KGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFF 63
KGK A + S+E LKP +DRKVGKRKAA K D G+ + K+ KK KPKRPPSAFF
Sbjct: 3 KGKKAGKTSKEVLKPVDDRKVGKRKAAV-KPDKGTAGKAKKAKKDPN---KPKRPPSAFF 58
Query: 64 VFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
VFLE+FRKTFK ENPNV VSAVGKA G KWKS++ AEKAPYE+KA K K+EY K +NAY
Sbjct: 59 VFLEDFRKTFKAENPNVKGVSAVGKAGGEKWKSLTKAEKAPYEAKAAKRKAEYEKLINAY 118
Query: 124 NKKQ-----DGDEASDKSKSEVND-EDEASGEEEH 152
N KQ D DE SDKSKSE+ND EDEASG+E H
Sbjct: 119 NNKQASTADDVDEESDKSKSEINDEEDEASGQEGH 153
>gi|22135473|gb|AAM93217.1|AF527616_1 nucleasome/chromatin assembly factor D protein NFD101 [Zea mays]
gi|2196672|emb|CAA70045.1| HMGd1 [Zea mays]
gi|194698578|gb|ACF83373.1| unknown [Zea mays]
gi|414886616|tpg|DAA62630.1| TPA: HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length = 126
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/118 (66%), Positives = 93/118 (78%), Gaps = 4/118 (3%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
A+ +G R R+ KA+KDPNKPKRPPSAFFVF+EEFRK +K+++PNV VS +GKA G
Sbjct: 5 ARSTAGDSRLSVRKTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGG 64
Query: 92 GKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA----SDKSKSEVNDEDE 145
KWKS+S AEKAPY SKAEKLK+EY KK++AYN KQ GD SDKSKSEVNDEDE
Sbjct: 65 DKWKSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQSGDPTASGDSDKSKSEVNDEDE 122
>gi|162459697|ref|NP_001105649.1| HMG-like nucleosome/chromatin assembly factor D [Zea mays]
gi|17017392|gb|AAL33650.1|AF440221_1 HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length = 126
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/118 (66%), Positives = 93/118 (78%), Gaps = 4/118 (3%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
A+ +G R R+ KA+KDPNKPKRPPSAFFVF+EEFRK +K+++PNV VS +GKA G
Sbjct: 5 ARSTAGDSRLSVRKTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSLIGKAGG 64
Query: 92 GKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA----SDKSKSEVNDEDE 145
KWKS+S AEKAPY SKAEKLK+EY KK++AYN KQ GD SDKSKSEVNDEDE
Sbjct: 65 DKWKSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQSGDPTASGDSDKSKSEVNDEDE 122
>gi|115480551|ref|NP_001063869.1| Os09g0551600 [Oryza sativa Japonica Group]
gi|50726318|dbj|BAD33893.1| putative HMGd1 [Oryza sativa Japonica Group]
gi|113632102|dbj|BAF25783.1| Os09g0551600 [Oryza sativa Japonica Group]
gi|213959176|gb|ACJ54922.1| HMG type nucleosome/chromatin assembly factor [Oryza sativa
Japonica Group]
gi|215694881|dbj|BAG90072.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 127
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 98/125 (78%), Gaps = 4/125 (3%)
Query: 30 ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA 89
A ++ +G R R+ KA+KDPNKPKRPPSAFFVF+E+FRK +K+++PNV VS +GKA
Sbjct: 3 ARSRSSNGDSRLSVRKTKAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKA 62
Query: 90 AGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA----SDKSKSEVNDEDE 145
G KWKSM+ A+KAP+ +KAEKLK+EY KK++AYN KQ G A SDKSKSEVNDEDE
Sbjct: 63 GGDKWKSMTDADKAPFVTKAEKLKAEYTKKIDAYNNKQAGGPATSGDSDKSKSEVNDEDE 122
Query: 146 ASGEE 150
SG+E
Sbjct: 123 GSGDE 127
>gi|225448400|ref|XP_002270185.1| PREDICTED: high mobility group B protein 1 isoform 2 [Vitis
vinifera]
Length = 156
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 90/130 (69%), Positives = 104/130 (80%), Gaps = 3/130 (2%)
Query: 1 MKGAKGKGAARV-SQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
MK KGK AAR +EALKP DR++GKRKAA K D +K+ K+EK AKKDPNKPKRP
Sbjct: 1 MKVTKGKAAARKDKKEALKPVEDRRLGKRKAAL-KADKSTKKLAKKEKLAKKDPNKPKRP 59
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
PSAFFVFLEEFRK +K+E+PNV AVSAVGKA G KWKS+S A+KAPYE+KA K KS+Y K
Sbjct: 60 PSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAAKRKSDYEK 119
Query: 119 KMNAYNKKQD 128
M AYNKKQ+
Sbjct: 120 LMAAYNKKQE 129
>gi|116778852|gb|ABK21026.1| unknown [Picea sitchensis]
gi|116782574|gb|ABK22556.1| unknown [Picea sitchensis]
gi|116782678|gb|ABK22606.1| unknown [Picea sitchensis]
gi|116782786|gb|ABK22657.1| unknown [Picea sitchensis]
gi|116782898|gb|ABK22712.1| unknown [Picea sitchensis]
gi|116791878|gb|ABK26144.1| unknown [Picea sitchensis]
gi|148907501|gb|ABR16881.1| unknown [Picea sitchensis]
gi|224284566|gb|ACN40016.1| unknown [Picea sitchensis]
gi|224285212|gb|ACN40332.1| unknown [Picea sitchensis]
gi|224286734|gb|ACN41070.1| unknown [Picea sitchensis]
Length = 157
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/146 (60%), Positives = 102/146 (69%), Gaps = 8/146 (5%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG K K A S K ++ +GKRK A AK S RQ K+ +KA KDPNKPKRP S
Sbjct: 1 MKGGKAKNEA--SSTLKKVEEKPIGKRKTA-AKESKVSSRQEKKGRKAAKDPNKPKRPAS 57
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+E+FRKT+K++NPNV +VS VGKA G KWKSMS A+KAPY +KA K K+EY K M
Sbjct: 58 AFFVFMEDFRKTYKEKNPNVKSVSVVGKAGGDKWKSMSEADKAPYVAKAGKRKTEYEKNM 117
Query: 121 NAYNKKQ-----DGDEASDKSKSEVN 141
AYN KQ D E SDKSKSEVN
Sbjct: 118 AAYNNKQTSTAGDSAEESDKSKSEVN 143
>gi|222642048|gb|EEE70180.1| hypothetical protein OsJ_30257 [Oryza sativa Japonica Group]
Length = 139
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 98/137 (71%), Gaps = 16/137 (11%)
Query: 30 ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA 89
A ++ +G R R+ KA+KDPNKPKRPPSAFFVF+E+FRK +K+++PNV VS +GKA
Sbjct: 3 ARSRSSNGDSRLSVRKTKAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKA 62
Query: 90 AGGKWKSMSPA------------EKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA----S 133
G KWKSM+ A +KAP+ +KAEKLK+EY KK++AYN KQ G A S
Sbjct: 63 GGDKWKSMTDAIRGYVVVAVPCKDKAPFVTKAEKLKAEYTKKIDAYNNKQAGGPATSGDS 122
Query: 134 DKSKSEVNDEDEASGEE 150
DKSKSEVNDEDE SG+E
Sbjct: 123 DKSKSEVNDEDEGSGDE 139
>gi|359386154|gb|AEV43366.1| group B HMG-box protein [Citrus sinensis]
Length = 165
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/129 (63%), Positives = 95/129 (73%), Gaps = 3/129 (2%)
Query: 1 MKGAKGKGAARVSQ-EALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
MK +GKGA + + E +KP DR GKRKA S +KR K K AKKDPNKPKRP
Sbjct: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRT-KNVKSAKKDPNKPKRP 59
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
PSAFFVFLEEFRK +K+E+PNV AVSAVGKA G KWKS++ AEKAP+E+KA K K +Y K
Sbjct: 60 PSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEK 119
Query: 119 KMNAYNKKQ 127
M AYNKKQ
Sbjct: 120 LMTAYNKKQ 128
>gi|125564627|gb|EAZ10007.1| hypothetical protein OsI_32309 [Oryza sativa Indica Group]
Length = 139
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 98/137 (71%), Gaps = 16/137 (11%)
Query: 30 ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA 89
A ++ +G R R+ KA+KDPNKPKRPPSAFFVF+E+FRK +K+++PNV VS +GKA
Sbjct: 3 ARSRSSNGDSRLSVRKTKAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKA 62
Query: 90 AGGKWKSMSPA------------EKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA----S 133
G KWKSM+ A +KAP+ +KAEKLK+EY KK++AYN KQ G A S
Sbjct: 63 GGDKWKSMTDAIGGYVVVAVPCKDKAPFVTKAEKLKAEYTKKIDAYNNKQAGGPATSGDS 122
Query: 134 DKSKSEVNDEDEASGEE 150
DKSKSEVNDEDE SG+E
Sbjct: 123 DKSKSEVNDEDEGSGDE 139
>gi|449521910|ref|XP_004167972.1| PREDICTED: high mobility group B protein 1-like [Cucumis sativus]
Length = 112
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/101 (75%), Positives = 85/101 (84%), Gaps = 2/101 (1%)
Query: 1 MKGAKGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
MKG+KGKG +RVS+EALKP +DRKVGKRKA K D G KR K++ KAKKDPNKPKRPP
Sbjct: 1 MKGSKGKGTSRVSKEALKPVDDRKVGKRKAVV-KADKGIKRPTKKDLKAKKDPNKPKRPP 59
Query: 60 SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
SAFFVFLEEFRK +K+ENPNV AVSAVGKA G KWKS+S A
Sbjct: 60 SAFFVFLEEFRKEYKRENPNVKAVSAVGKAGGEKWKSLSHA 100
>gi|238013344|gb|ACR37707.1| unknown [Zea mays]
gi|414590135|tpg|DAA40706.1| TPA: HMG1/2-like protein [Zea mays]
Length = 127
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/119 (63%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
A+ G R R+ K +KDPNKPKRPP+AFFVF+EEFRK +K+++PNV VS +GKA G
Sbjct: 5 ARSGGGDSRLSVRKTKVEKDPNKPKRPPTAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGG 64
Query: 92 GKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA-----SDKSKSEVNDEDE 145
WKS+S AEKAPY SKAEKLK EY KKM+AYN KQ G SDKSKSEVND DE
Sbjct: 65 DMWKSLSDAEKAPYVSKAEKLKVEYTKKMDAYNNKQSGGGPTLSGDSDKSKSEVNDGDE 123
>gi|359481661|ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-like [Vitis vinifera]
gi|147815135|emb|CAN74566.1| hypothetical protein VITISV_023651 [Vitis vinifera]
gi|297740214|emb|CBI30396.3| unnamed protein product [Vitis vinifera]
Length = 168
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/148 (73%), Positives = 120/148 (81%), Gaps = 8/148 (5%)
Query: 1 MKGAKGKGAARV-SQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
MK AKGKGAAR ++EALKP DRK+GKRKAA K + SKR ++KKAKKDPNKPKRP
Sbjct: 1 MKAAKGKGAARRDTKEALKPAEDRKIGKRKAAV-KAEKSSKRATTKDKKAKKDPNKPKRP 59
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
PSAFFVFLEEFRK FKKENPNV AVSAVGKA G +WKS+S AEKAPYE+KA K K+EY K
Sbjct: 60 PSAFFVFLEEFRKVFKKENPNVKAVSAVGKAGGERWKSLSEAEKAPYEAKAAKKKAEYEK 119
Query: 119 KMNAYNKKQ-----DGDEASDKSKSEVN 141
MNAYNKKQ DGDE SD+SKSEVN
Sbjct: 120 IMNAYNKKQESTADDGDEESDRSKSEVN 147
>gi|226505018|ref|NP_001151148.1| LOC100284781 [Zea mays]
gi|195644628|gb|ACG41782.1| HMG1/2-like protein [Zea mays]
Length = 127
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/119 (62%), Positives = 86/119 (72%), Gaps = 5/119 (4%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
A+ G R R+ K +KDPNKPKRPP+ FFVF+EEFRK +K+++PNV VS +GKA G
Sbjct: 5 ARSGGGDSRLSVRKTKVEKDPNKPKRPPTTFFVFMEEFRKDYKEKHPNVKQVSVIGKAGG 64
Query: 92 GKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA-----SDKSKSEVNDEDE 145
WKS+S AEKAPY SKAEKLK EY KKM+AYN KQ G SDKSKSEVND DE
Sbjct: 65 DMWKSLSDAEKAPYVSKAEKLKVEYTKKMDAYNNKQSGGGPTLSGDSDKSKSEVNDGDE 123
>gi|414886617|tpg|DAA62631.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
Length = 119
Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/112 (65%), Positives = 87/112 (77%), Gaps = 4/112 (3%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
A+ +G R R+ KA+KDPNKPKRPPSAFFVF+EEFRK +K+++PNV VS +GKA G
Sbjct: 5 ARSTAGDSRLSVRKTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGG 64
Query: 92 GKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA----SDKSKSE 139
KWKS+S AEKAPY SKAEKLK+EY KK++AYN KQ GD SDKSKSE
Sbjct: 65 DKWKSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQSGDPTASGDSDKSKSE 116
>gi|116790306|gb|ABK25570.1| unknown [Picea sitchensis]
gi|224286844|gb|ACN41125.1| unknown [Picea sitchensis]
gi|294461904|gb|ADE76508.1| unknown [Picea sitchensis]
Length = 151
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/146 (60%), Positives = 106/146 (72%), Gaps = 14/146 (9%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG K K +++ D+K GKRK AT D+ KRQ K+EKKAKKDPNKPKRPPS
Sbjct: 1 MKGPKAKVEQKLA------GDKKTGKRKPAT---DTQVKRQIKKEKKAKKDPNKPKRPPS 51
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVFL+EFRK +K+ NPN +VSAVGKA G KW+++S AEKAPY +KAEK K+EY K M
Sbjct: 52 AFFVFLDEFRKEYKQANPNANSVSAVGKAGGEKWRALSDAEKAPYVAKAEKKKAEYEKSM 111
Query: 121 NAYNKKQDGD-----EASDKSKSEVN 141
YNK++D + E SDKSKSEVN
Sbjct: 112 ATYNKQKDSNTEEVAEESDKSKSEVN 137
>gi|357159916|ref|XP_003578598.1| PREDICTED: HMG1/2-like protein-like [Brachypodium distachyon]
Length = 128
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/122 (59%), Positives = 89/122 (72%), Gaps = 4/122 (3%)
Query: 30 ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA 89
A + G R R+ KA+KDPN+PKRPPSAFFVF+E FRK +K+++P+V VS VGKA
Sbjct: 3 ARVRSSGGDSRLSVRKTKAEKDPNQPKRPPSAFFVFMEGFRKDYKEKHPDVKQVSVVGKA 62
Query: 90 AGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA----SDKSKSEVNDEDE 145
G +WKS+S AEKAP+ +KAEKLK+EY KKM AYN Q G + SDKSKSEVNDE +
Sbjct: 63 GGAEWKSLSDAEKAPFVAKAEKLKAEYNKKMVAYNNPQAGGQEASGDSDKSKSEVNDEAD 122
Query: 146 AS 147
S
Sbjct: 123 GS 124
>gi|2894109|emb|CAA05365.1| high mobility group protein [Solanum tuberosum]
Length = 141
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/145 (55%), Positives = 97/145 (66%), Gaps = 23/145 (15%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKGAK K A D K+G RK AT + K+ K A KDPNKPKRPPS
Sbjct: 1 MKGAKSKAKA----------DTKLGVRKKAT---------ESKKAKNAAKDPNKPKRPPS 41
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+EEFRKT+K+++PN +V+ VGKA G KWK +S EKAPY++KAEK K+EY K M
Sbjct: 42 AFFVFMEEFRKTYKEKHPNNKSVAVVGKAGGDKWKQLSDEEKAPYQAKAEKRKAEYQKNM 101
Query: 121 NAYNKKQDG----DEASDKSKSEVN 141
+AYNKK DE SDKSKSEV+
Sbjct: 102 DAYNKKLAAGDADDEESDKSKSEVH 126
>gi|106879575|emb|CAJ38371.1| HMG-protein [Plantago major]
Length = 212
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/142 (68%), Positives = 111/142 (78%), Gaps = 8/142 (5%)
Query: 6 GKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFV 64
G+ A V +E LKP +DRKVGKRKAA A K K++KKAKKDPNKPKRPPSAFFV
Sbjct: 51 GRSKAAVRKETLKPVDDRKVGKRKAAAA--PKVKKPAAKKDKKAKKDPNKPKRPPSAFFV 108
Query: 65 FLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYN 124
FLEEFR+TFKKENPN+ AVSAVGKA G KWKS++ AEKAPYE+KA K KSEY K MNAYN
Sbjct: 109 FLEEFRQTFKKENPNIKAVSAVGKAGGEKWKSLTDAEKAPYEAKAAKRKSEYEKLMNAYN 168
Query: 125 KKQ-----DGDEASDKSKSEVN 141
KKQ + DE S+KS+SEV+
Sbjct: 169 KKQESSADEADEGSEKSRSEVH 190
>gi|168032698|ref|XP_001768855.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168032700|ref|XP_001768856.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679967|gb|EDQ66408.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679968|gb|EDQ66409.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 110
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/104 (66%), Positives = 81/104 (77%), Gaps = 5/104 (4%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN PKRPP+AFF+FL EFR+ FK+ENPNV V+AVGKA G KWKSMS AEK P+ +KA
Sbjct: 7 KDPNAPKRPPTAFFIFLNEFREVFKRENPNVKGVTAVGKAGGEKWKSMSEAEKQPFMTKA 66
Query: 110 EKLKSEYGKKMNAYNKKQDGDEA----SDKSKSEVN-DEDEASG 148
+ KSEY K ++AYNKKQD +E SDKSKSE+N DEDE G
Sbjct: 67 VQKKSEYDKTISAYNKKQDAEEVEAEESDKSKSEINDDEDEEVG 110
>gi|414590133|tpg|DAA40704.1| TPA: hypothetical protein ZEAMMB73_374315 [Zea mays]
Length = 140
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 85/121 (70%), Gaps = 5/121 (4%)
Query: 24 VGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
VG + A+ G R R+ K +KDPNKPKRPP+AFFVF+EEFRK +K+++PNV V
Sbjct: 17 VGLEMKSRARSGGGDSRLSVRKTKVEKDPNKPKRPPTAFFVFMEEFRKDYKEKHPNVKQV 76
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA-----SDKSKS 138
S +GKA G WKS+S AEKAPY SKAEKLK EY KKM+AYN KQ G SDKSKS
Sbjct: 77 SVIGKAGGDMWKSLSDAEKAPYVSKAEKLKVEYTKKMDAYNNKQSGGGPTLSGDSDKSKS 136
Query: 139 E 139
E
Sbjct: 137 E 137
>gi|79318286|ref|NP_001031074.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|297845040|ref|XP_002890401.1| hypothetical protein ARALYDRAFT_472301 [Arabidopsis lyrata subsp.
lyrata]
gi|297336243|gb|EFH66660.1| hypothetical protein ARALYDRAFT_472301 [Arabidopsis lyrata subsp.
lyrata]
gi|332191886|gb|AEE30007.1| high mobility group B2 protein [Arabidopsis thaliana]
Length = 142
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 100/150 (66%), Gaps = 21/150 (14%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKGAK K R S+ ++ T K G+ R K A KDPNKPKRP S
Sbjct: 1 MKGAKSKTETRSSKLSV-------------TKKPAKGAGRG----KAAAKDPNKPKRPAS 43
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+E+FR+TFKKENP +V+ VGKAAG KWKS+S +EKAPY +KAEK K EY K +
Sbjct: 44 AFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNI 103
Query: 121 NAYNKK-QDG---DEASDKSKSEVNDEDEA 146
AYNKK ++G DE SDKS SEVNDED+A
Sbjct: 104 KAYNKKLEEGPKEDEESDKSVSEVNDEDDA 133
>gi|729736|sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein
Length = 144
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/107 (64%), Positives = 85/107 (79%), Gaps = 4/107 (3%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K+ KKA KDPNKPKRPPSAFFVF+E+FRKT+K+++PN +V+ VGKA G KWK ++ AEK
Sbjct: 24 KKTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEK 83
Query: 103 APYESKAEKLKSEYGKKMNAYNKKQ----DGDEASDKSKSEVNDEDE 145
AP+ SKAEK K EY K + AYNKKQ +E SDKS+SEVND+DE
Sbjct: 84 APFISKAEKRKQEYEKNLQAYNKKQAAGAAEEEESDKSRSEVNDDDE 130
>gi|414590134|tpg|DAA40705.1| TPA: hypothetical protein ZEAMMB73_374315 [Zea mays]
Length = 120
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 5/113 (4%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
A+ G R R+ K +KDPNKPKRPP+AFFVF+EEFRK +K+++PNV VS +GKA G
Sbjct: 5 ARSGGGDSRLSVRKTKVEKDPNKPKRPPTAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGG 64
Query: 92 GKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA-----SDKSKSE 139
WKS+S AEKAPY SKAEKLK EY KKM+AYN KQ G SDKSKSE
Sbjct: 65 DMWKSLSDAEKAPYVSKAEKLKVEYTKKMDAYNNKQSGGGPTLSGDSDKSKSE 117
>gi|8886929|gb|AAF80615.1|AC069251_8 F2D10.18 [Arabidopsis thaliana]
Length = 662
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/156 (55%), Positives = 103/156 (66%), Gaps = 22/156 (14%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKGAK K R S+ + V K+ A + R K A KDPNKPKRP S
Sbjct: 378 MKGAKSKTETRSSKLS-------VTKKPA----------KGAGRGKAAAKDPNKPKRPAS 420
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+E+FR+TFKKENP +V+ VGKAAG KWKS+S +EKAPY +KAEK K EY K +
Sbjct: 421 AFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNI 480
Query: 121 NAYNKK-QDG---DEASDKSKSEVNDEDEA-SGEEE 151
AYNKK ++G DE SDKS SEVNDED+A G EE
Sbjct: 481 KAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGSEE 516
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/145 (53%), Positives = 93/145 (64%), Gaps = 24/145 (16%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKGAK K R + KL S +K+ K K A KDPNKPKRP S
Sbjct: 522 MKGAKSKAETR-------------------STKL-SVTKKPAKGAKGAAKDPNKPKRPSS 561
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+E+FR T+K+E+P +V+AVGKA G KWKS+S +EKAPY +KA+K K EY K M
Sbjct: 562 AFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNM 621
Query: 121 NAYNKK-QDG---DEASDKSKSEVN 141
AYNKK ++G DE SDKS SEVN
Sbjct: 622 KAYNKKLEEGPKEDEESDKSVSEVN 646
>gi|255571919|ref|XP_002526902.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223533801|gb|EEF35533.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 190
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/129 (65%), Positives = 100/129 (77%), Gaps = 3/129 (2%)
Query: 1 MKGAKGKGAARV-SQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
MK KGK A+ +E LKP DRK+GKR AA K + SK+ K++K AKKDPN+PKRP
Sbjct: 1 MKVGKGKETAKKDRKEVLKPVEDRKLGKRSAAL-KPNKNSKKVTKKDKPAKKDPNRPKRP 59
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
PSAFFVFLE+FRK +K+E+PNV AVSAVGKA G KWKSMS AEK+P+E+KA K KS+Y K
Sbjct: 60 PSAFFVFLEDFRKVYKQEHPNVKAVSAVGKAGGEKWKSMSNAEKSPFEAKAAKRKSDYEK 119
Query: 119 KMNAYNKKQ 127
M AYNKKQ
Sbjct: 120 LMTAYNKKQ 128
>gi|414886615|tpg|DAA62629.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
Length = 123
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/96 (66%), Positives = 78/96 (81%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
A+ +G R R+ KA+KDPNKPKRPPSAFFVF+EEFRK +K+++PNV VS +GKA G
Sbjct: 5 ARSTAGDSRLSVRKTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGG 64
Query: 92 GKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
KWKS+S AEKAPY SKAEKLK+EY KK++AYN KQ
Sbjct: 65 DKWKSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQ 100
>gi|414886614|tpg|DAA62628.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
Length = 118
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/96 (66%), Positives = 78/96 (81%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
A+ +G R R+ KA+KDPNKPKRPPSAFFVF+EEFRK +K+++PNV VS +GKA G
Sbjct: 5 ARSTAGDSRLSVRKTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGG 64
Query: 92 GKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
KWKS+S AEKAPY SKAEKLK+EY KK++AYN KQ
Sbjct: 65 DKWKSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQ 100
>gi|297845042|ref|XP_002890402.1| hypothetical protein ARALYDRAFT_472304 [Arabidopsis lyrata subsp.
lyrata]
gi|297336244|gb|EFH66661.1| hypothetical protein ARALYDRAFT_472304 [Arabidopsis lyrata subsp.
lyrata]
Length = 141
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 97/130 (74%), Gaps = 7/130 (5%)
Query: 23 KVGKRKAAT--AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV 80
K GK K T AKL S +K+ K K A KDPNKPKRP SAFFVF+E+FR+T+KKE+P
Sbjct: 4 KGGKSKTETRNAKL-SVTKKPAKGGKGAAKDPNKPKRPSSAFFVFMEDFRETYKKEHPKN 62
Query: 81 TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK-QDG---DEASDKS 136
+V+AVGKA G KWKS+S +EKAPY +KA+K K EY K M AYNKK ++G DE SDKS
Sbjct: 63 KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEESDKS 122
Query: 137 KSEVNDEDEA 146
SEVNDED+A
Sbjct: 123 VSEVNDEDDA 132
>gi|1052956|gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]
Length = 146
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/103 (64%), Positives = 83/103 (80%), Gaps = 4/103 (3%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K+ KK+ KDPNKPKRPPSAFFVF+E+FRKT+K+++PN +V+AVGKA G KWK ++ AEK
Sbjct: 24 KKSKKSVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAAVGKAGGDKWKQLTDAEK 83
Query: 103 APYESKAEKLKSEYGKKMNAYNKKQDGDEA----SDKSKSEVN 141
AP+ +KAEK K EY K M AYN+KQ G+ A SDKS+SEVN
Sbjct: 84 APFIAKAEKRKQEYEKSMQAYNRKQAGEAADEEESDKSRSEVN 126
>gi|312282031|dbj|BAJ33881.1| unnamed protein product [Thellungiella halophila]
Length = 141
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 94/125 (75%), Gaps = 7/125 (5%)
Query: 23 KVGKRKAAT--AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV 80
K GK K T +KL S +K+ K K A KDPNKPKRP SAFFVF+EEFR+T+KKE+PN
Sbjct: 2 KGGKSKTETRSSKL-SVNKKPTKGGKGAAKDPNKPKRPASAFFVFMEEFRETYKKEHPNN 60
Query: 81 TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQD----GDEASDKS 136
+V+AVGKA G KWKS+S +EKAPY++KA+K K EY K MNAYNKKQ+ DE SDKS
Sbjct: 61 KSVAAVGKAGGQKWKSLSDSEKAPYQAKADKRKVEYEKNMNAYNKKQEEGPKEDEESDKS 120
Query: 137 KSEVN 141
SEV+
Sbjct: 121 VSEVH 125
>gi|359486418|ref|XP_003633441.1| PREDICTED: high mobility group B protein 1 [Vitis vinifera]
Length = 151
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/148 (60%), Positives = 103/148 (69%), Gaps = 23/148 (15%)
Query: 1 MKGAKGKGAARV-SQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
MK KGK AAR +EALKP DR++GKRKAA K D +K+ K+EK AKKDPNKPKRP
Sbjct: 1 MKVTKGKAAARKDKKEALKPVEDRRLGKRKAAL-KADKSTKKLAKKEKLAKKDPNKPKRP 59
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
PSAFFVFLEEFRK +K+E+PNV AVS A+KAPYE+KA K KS+Y K
Sbjct: 60 PSAFFVFLEEFRKVYKQEHPNVKAVS---------------ADKAPYEAKAAKRKSDYEK 104
Query: 119 KMNAYNKKQ-----DGDEASDKSKSEVN 141
M AYNKKQ D +E SD+SKSEVN
Sbjct: 105 LMAAYNKKQESMADDDEEESDRSKSEVN 132
>gi|2196548|gb|AAB61215.1| DNA-binding protein [Nicotiana tabacum]
Length = 142
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 79/94 (84%), Gaps = 3/94 (3%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRPPSAFFVF+EEFRKT+K+++PN +V+AVGKA G WK +S AEKAPY++KAE
Sbjct: 32 DPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKSVAAVGKAGGDAWKKLSEAEKAPYQAKAE 91
Query: 111 KLKSEYGKKMNAYNKKQDGD---EASDKSKSEVN 141
K K+EY K M+AYN+KQ GD + SDKSKSEV+
Sbjct: 92 KRKAEYQKNMDAYNRKQAGDAEEDESDKSKSEVH 125
>gi|224081483|ref|XP_002306429.1| high mobility group family [Populus trichocarpa]
gi|222855878|gb|EEE93425.1| high mobility group family [Populus trichocarpa]
Length = 144
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 91/126 (72%), Gaps = 7/126 (5%)
Query: 23 KVGKRKAATAKLDSGSKRQG-----KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKEN 77
K G+ K+ + D+ KR+G K KKA KDPNKPKRP SAFFVF+E+FRK +K+ +
Sbjct: 2 KGGRSKSDSRNNDAKLKRKGAGAGTKASKKAAKDPNKPKRPASAFFVFMEDFRKQYKESH 61
Query: 78 PNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDG--DEASDK 135
PN +V+AVGKA G KWKS+S AEKAPY +KAEK K EY K M AYNK+ G D+ SDK
Sbjct: 62 PNNKSVAAVGKAGGDKWKSLSEAEKAPYAAKAEKRKFEYNKDMAAYNKRLAGGNDDESDK 121
Query: 136 SKSEVN 141
SKSEVN
Sbjct: 122 SKSEVN 127
>gi|295913196|gb|ADG57857.1| transcription factor [Lycoris longituba]
Length = 143
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/103 (66%), Positives = 80/103 (77%), Gaps = 8/103 (7%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
KA KDPNKPKRPPSAFFVF+E FRK FK +NP +++AVGKA G +WKSMS +EKAP+
Sbjct: 25 KAGKDPNKPKRPPSAFFVFMEGFRKEFKDKNPKNKSIAAVGKAGGERWKSMSDSEKAPFV 84
Query: 107 SKAEKLKSEYGKKMNAYNKKQDG--------DEASDKSKSEVN 141
SKAEKLK+EYGKKMNA+NK + +E SDKSKSEVN
Sbjct: 85 SKAEKLKAEYGKKMNAHNKGEKLRDDNAELEEEESDKSKSEVN 127
>gi|145323962|ref|NP_001077570.1| high mobility group B3 protein [Arabidopsis thaliana]
gi|332191890|gb|AEE30011.1| high mobility group B3 protein [Arabidopsis thaliana]
Length = 140
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/150 (54%), Positives = 98/150 (65%), Gaps = 24/150 (16%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKGAK K R + KL S +K+ K K A KDPNKPKRP S
Sbjct: 1 MKGAKSKAETR-------------------STKL-SVTKKPAKGAKGAAKDPNKPKRPSS 40
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+E+FR T+K+E+P +V+AVGKA G KWKS+S +EKAPY +KA+K K EY K M
Sbjct: 41 AFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNM 100
Query: 121 NAYNKK-QDG---DEASDKSKSEVNDEDEA 146
AYNKK ++G DE SDKS SEVNDED+A
Sbjct: 101 KAYNKKLEEGPKEDEESDKSVSEVNDEDDA 130
>gi|351725757|ref|NP_001235312.1| uncharacterized protein LOC100499992 [Glycine max]
gi|255628371|gb|ACU14530.1| unknown [Glycine max]
Length = 139
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/116 (60%), Positives = 86/116 (74%), Gaps = 9/116 (7%)
Query: 35 DSGSKRQG-----KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA 89
DS KR+G K+ +KA KDPNKPKRPPSAFFVF+ EFR+ FKKE+PN +V+ VGKA
Sbjct: 12 DSRLKRKGAGAGRKQSRKAAKDPNKPKRPPSAFFVFMSEFREQFKKEHPNNKSVAVVGKA 71
Query: 90 AGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA----SDKSKSEVN 141
G KWKS+S AEKAP+ + AEK K EY K ++AYNK+ +G + SDKSKSEVN
Sbjct: 72 GGEKWKSLSDAEKAPFVATAEKKKQEYEKTISAYNKQLEGKNSEEDESDKSKSEVN 127
>gi|388504718|gb|AFK40425.1| unknown [Lotus japonicus]
Length = 152
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/89 (74%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
KA KDPNKPKRPPSAFFVF+E+FRK F KENP AVSAVGKAAG KWKSMS AEKAPY
Sbjct: 36 KAAKDPNKPKRPPSAFFVFMEDFRKIFNKENPENKAVSAVGKAAGAKWKSMSEAEKAPYV 95
Query: 107 SKAEKLKSEYGKKMNAYNKKQ-DGDEASD 134
+KAEK K++Y K M AYNKKQ +G A+D
Sbjct: 96 AKAEKRKADYEKTMKAYNKKQAEGPAAAD 124
>gi|118484838|gb|ABK94286.1| unknown [Populus trichocarpa]
Length = 144
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 91/126 (72%), Gaps = 7/126 (5%)
Query: 23 KVGKRKAATAKLDSGSKRQG-----KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKEN 77
K G+ K+ + D+ KR+G K KKA KDPNKPKRP SAFFVF+E+FRK +K+ +
Sbjct: 2 KGGRSKSDSRNNDAKLKRKGAGAGTKASKKAAKDPNKPKRPASAFFVFMEDFRKQYKESH 61
Query: 78 PNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDG--DEASDK 135
PN +V+AVGKA G KWKS+S AEKAP+ +KAEK K EY K M AYNK+ G D+ SDK
Sbjct: 62 PNNKSVAAVGKAGGDKWKSLSEAEKAPFAAKAEKRKFEYNKDMAAYNKRLAGGNDDESDK 121
Query: 136 SKSEVN 141
SKSEVN
Sbjct: 122 SKSEVN 127
>gi|309243128|gb|ADD74180.2| high mobility group box 3 protein [Gossypium hirsutum]
Length = 139
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 74/94 (78%), Gaps = 3/94 (3%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SAFFVF+EEFRK +K+ NP+ +VSAVGKA G KWKSM+ AEKAPY KAE
Sbjct: 34 DPNKPKRPASAFFVFMEEFRKQYKEANPDNRSVSAVGKAGGEKWKSMTDAEKAPYVQKAE 93
Query: 111 KLKSEYGKKMNAYNKKQDG---DEASDKSKSEVN 141
K KSEY KKM AYN K G D+ SDKSKSEVN
Sbjct: 94 KRKSEYNKKMQAYNLKLAGGGNDDESDKSKSEVN 127
>gi|388497528|gb|AFK36830.1| unknown [Medicago truncatula]
Length = 155
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/129 (57%), Positives = 89/129 (68%), Gaps = 14/129 (10%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAK--KDPNKPKRP 58
MKGAK KG ++ + L A K + + + G++ K K KDPNKPKRP
Sbjct: 1 MKGAKSKGESKKADAKL------------AVNKKGAAATKGGRKPAKGKEPKDPNKPKRP 48
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
PSAFFVF+E+FRK FKK+NP+ AVSAVGKAAG KWKS+S AEKAPY +KAEK K+EY K
Sbjct: 49 PSAFFVFMEDFRKQFKKDNPDNKAVSAVGKAAGAKWKSLSEAEKAPYAAKAEKRKAEYEK 108
Query: 119 KMNAYNKKQ 127
M AYNKKQ
Sbjct: 109 TMKAYNKKQ 117
>gi|388497036|gb|AFK36584.1| unknown [Medicago truncatula]
Length = 155
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 90/129 (69%), Gaps = 14/129 (10%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAK--KDPNKPKRP 58
MKGAK KG ++ + L N +K A A + G++ K K KDPNKPKRP
Sbjct: 1 MKGAKSKGESKKADAKLAVN------KKGAVAT------KGGRKPAKGKEPKDPNKPKRP 48
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
PSAFFVF+E+FRK FKK+NP+ AVSAVGKAAG KWKS+S AEKAPY +KAEK K+EY K
Sbjct: 49 PSAFFVFMEDFRKQFKKDNPDNKAVSAVGKAAGAKWKSLSEAEKAPYAAKAEKRKAEYEK 108
Query: 119 KMNAYNKKQ 127
M AYNKKQ
Sbjct: 109 TMKAYNKKQ 117
>gi|312281681|dbj|BAJ33706.1| unnamed protein product [Thellungiella halophila]
Length = 144
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/102 (68%), Positives = 81/102 (79%), Gaps = 4/102 (3%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R K A KDPNKPKRP SAFFVF+E+FR+TFKKE+P +V+AVGKAAG KWKS+S AEKA
Sbjct: 27 RSKAAAKDPNKPKRPASAFFVFMEDFRETFKKEHPKNKSVAAVGKAAGDKWKSLSDAEKA 86
Query: 104 PYESKAEKLKSEYGKKMNAYNKK-QDG---DEASDKSKSEVN 141
PY +KAEK K +Y K M AYNKK ++G DE SDKS SEVN
Sbjct: 87 PYVAKAEKRKVDYEKNMKAYNKKLEEGPKEDEESDKSVSEVN 128
>gi|148250187|gb|ABQ53545.1| HMG1 protein [Arachis diogoi]
Length = 141
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 76/100 (76%), Gaps = 6/100 (6%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYES 107
A KDPNKPKRPPSAFFVF+EEFRK F K++P AVSAVGKAAG KWK MS AEKAPY +
Sbjct: 26 AAKDPNKPKRPPSAFFVFMEEFRKQFNKDHPENKAVSAVGKAAGAKWKQMSDAEKAPYVA 85
Query: 108 KAEKLKSEYGKKMNAYNKKQ-----DGD-EASDKSKSEVN 141
K+EK K +Y K M AYNKKQ GD E SDKS SEVN
Sbjct: 86 KSEKRKQDYEKNMRAYNKKQAEGPTGGDEEESDKSISEVN 125
>gi|356508616|ref|XP_003523051.1| PREDICTED: HMG1/2-like protein-like [Glycine max]
Length = 152
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 68/81 (83%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
KA KDPNKPKRPPSAFFVF+EEFRK F KE+P+ AVSAVGKAAG KWK+MS AEKAPY
Sbjct: 36 KAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPDNKAVSAVGKAAGAKWKTMSDAEKAPYV 95
Query: 107 SKAEKLKSEYGKKMNAYNKKQ 127
+K+EK K EY K M AYNKKQ
Sbjct: 96 AKSEKRKVEYEKNMRAYNKKQ 116
>gi|449455609|ref|XP_004145545.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|449511984|ref|XP_004164108.1| PREDICTED: HMG1/2-like protein-like isoform 1 [Cucumis sativus]
gi|449511988|ref|XP_004164109.1| PREDICTED: HMG1/2-like protein-like isoform 2 [Cucumis sativus]
Length = 146
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/97 (71%), Positives = 74/97 (76%), Gaps = 6/97 (6%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SAFFVF+EEFRK F +ENPN AVSAVGKAAG KWKSMS AEKAPY +KA+
Sbjct: 35 DPNKPKRPASAFFVFMEEFRKKFNEENPNNKAVSAVGKAAGQKWKSMSDAEKAPYIAKAD 94
Query: 111 KLKSEYGKKMNAYNKKQ-DGDEA-----SDKSKSEVN 141
K K EY K M AYNKKQ G A S+KS SEVN
Sbjct: 95 KRKVEYEKNMKAYNKKQASGANAAEEDESEKSMSEVN 131
>gi|351723773|ref|NP_001235499.1| uncharacterized protein LOC100305957 [Glycine max]
gi|255627099|gb|ACU13894.1| unknown [Glycine max]
Length = 142
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/116 (61%), Positives = 84/116 (72%), Gaps = 9/116 (7%)
Query: 35 DSGSKRQG-----KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA 89
DS KR+G K+ KKA KDPNKPK PPSAFFVF+ EFR+ FKKE+PN +V+ VGKA
Sbjct: 12 DSRLKRKGAGAGRKQSKKAAKDPNKPKGPPSAFFVFMSEFREQFKKEHPNNKSVAVVGKA 71
Query: 90 AGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA----SDKSKSEVN 141
G KWKS+S AEKAP+ + AEK K EY K + AYNKK +G + SDKSKSEVN
Sbjct: 72 GGDKWKSLSDAEKAPFVATAEKKKQEYEKTILAYNKKLEGKNSEEDESDKSKSEVN 127
>gi|13877775|gb|AAK43965.1|AF370150_1 putative HMG protein [Arabidopsis thaliana]
Length = 138
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 92/156 (58%), Gaps = 28/156 (17%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG + K A + + LK RK GK K KKDPN+PKRPPS
Sbjct: 1 MKGGESKAEATSTDQRLKTRGRKAGK--------------------KTKKDPNQPKRPPS 40
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVFLE+FRK F NPN +V+ VGKAAG +WK+M+ +KAPY +KAE +K+EY K +
Sbjct: 41 AFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKAMTDEDKAPYVAKAESIKTEYIKNV 100
Query: 121 NAYNKKQDG-----DEASDKSKSEVNDEDEASGEEE 151
YN K ++ SDKSKSEV DEA EEE
Sbjct: 101 QQYNLKLASGTNREEDDSDKSKSEV---DEAVSEEE 133
>gi|18394898|ref|NP_564123.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|75219648|sp|O49596.1|HMGB2_ARATH RecName: Full=High mobility group B protein 2; AltName: Full=High
mobility group protein B 1; Short=AtHMGbeta1; Short=HMG
beta 1; AltName: Full=Nucleosome/chromatin assembly
factor group D 02; Short=Nucleosome/chromatin assembly
factor group D 2
gi|13877971|gb|AAK44063.1|AF370248_1 unknown protein [Arabidopsis thaliana]
gi|2832359|emb|CAA74401.1| HMG protein [Arabidopsis thaliana]
gi|17104699|gb|AAL34238.1| unknown protein [Arabidopsis thaliana]
gi|21536964|gb|AAM61305.1| unknown [Arabidopsis thaliana]
gi|26452113|dbj|BAC43146.1| unknown protein [Arabidopsis thaliana]
gi|225897948|dbj|BAH30306.1| hypothetical protein [Arabidopsis thaliana]
gi|332191885|gb|AEE30006.1| high mobility group B2 protein [Arabidopsis thaliana]
Length = 144
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 80/102 (78%), Gaps = 4/102 (3%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R K A KDPNKPKRP SAFFVF+E+FR+TFKKENP +V+ VGKAAG KWKS+S +EKA
Sbjct: 27 RGKAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKA 86
Query: 104 PYESKAEKLKSEYGKKMNAYNKK-QDG---DEASDKSKSEVN 141
PY +KAEK K EY K + AYNKK ++G DE SDKS SEVN
Sbjct: 87 PYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEESDKSVSEVN 128
>gi|145323960|ref|NP_001077569.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|332191887|gb|AEE30008.1| high mobility group B2 protein [Arabidopsis thaliana]
Length = 143
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 80/102 (78%), Gaps = 4/102 (3%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R K A KDPNKPKRP SAFFVF+E+FR+TFKKENP +V+ VGKAAG KWKS+S +EKA
Sbjct: 27 RGKAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKA 86
Query: 104 PYESKAEKLKSEYGKKMNAYNKK-QDG---DEASDKSKSEVN 141
PY +KAEK K EY K + AYNKK ++G DE SDKS SEVN
Sbjct: 87 PYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEESDKSVSEVN 128
>gi|296088654|emb|CBI37645.3| unnamed protein product [Vitis vinifera]
Length = 154
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/147 (53%), Positives = 98/147 (66%), Gaps = 16/147 (10%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG K K A +K D K+ +K A + K+ K+EK A KDPNKPKRP S
Sbjct: 1 MKGGKSKAAE------VKRADSKLSVKKKGAAAV---GKKTAKKEK-AVKDPNKPKRPAS 50
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+EEFRK +K+++P +VS VGKA G KWKS+S AEKAPY +KAEK K+EY K M
Sbjct: 51 AFFVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSM 110
Query: 121 NAYNKKQ-DG-----DEASDKSKSEVN 141
AYNK+ +G +E SDKS+SEVN
Sbjct: 111 QAYNKRMAEGPTAAEEEESDKSRSEVN 137
>gi|2832355|emb|CAA74403.1| HMG protein [Arabidopsis thaliana]
Length = 138
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 91/156 (58%), Gaps = 28/156 (17%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG + K A + + LK RK GK K KKDPN+PKRPPS
Sbjct: 1 MKGGESKAGATSTDQRLKTRGRKAGK--------------------KTKKDPNQPKRPPS 40
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVFLE+FRK F NPN +V+ VGKAAG +WKSM+ +KAPY +KAE K+EY K +
Sbjct: 41 AFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKSMTDEDKAPYVAKAESRKTEYIKNV 100
Query: 121 NAYNKKQDG-----DEASDKSKSEVNDEDEASGEEE 151
YN K ++ SDKSKSEV DEA EEE
Sbjct: 101 QQYNLKLASGTNREEDDSDKSKSEV---DEAVSEEE 133
>gi|1813329|dbj|BAA19156.1| HMG-1 [Canavalia gladiata]
Length = 141
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/117 (58%), Positives = 86/117 (73%), Gaps = 10/117 (8%)
Query: 35 DSGSKRQG-----KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA 89
D+ KR+G K+ KKA KDPNKPKRPPSAFFVF+ EFR+ +KKE+P +V+ VGKA
Sbjct: 12 DNRLKRKGAGAGRKQSKKAAKDPNKPKRPPSAFFVFMSEFREQYKKEHPTNKSVAVVGKA 71
Query: 90 AGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDG-----DEASDKSKSEVN 141
G KWKS+S AEKAP+ ++AEK K EY K + AYN+K +G +E SDKSKSEVN
Sbjct: 72 GGDKWKSLSDAEKAPFVARAEKKKEEYDKSILAYNRKLEGKNPSEEEKSDKSKSEVN 128
>gi|351725567|ref|NP_001236841.1| HMG1/2-like protein [Glycine max]
gi|123379|sp|P26585.1|HMGL_SOYBN RecName: Full=HMG1/2-like protein; AltName: Full=Protein SB11
gi|18645|emb|CAA41200.1| HMG-1 like protein gene [Glycine max]
Length = 152
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 67/81 (82%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
KA KDPNKPKRPPSAFFVF+EEFRK F KE+P AVSAVGKAAG KWK+MS AEKAPY
Sbjct: 36 KAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYV 95
Query: 107 SKAEKLKSEYGKKMNAYNKKQ 127
+K+EK K EY K M AYNKKQ
Sbjct: 96 AKSEKRKVEYEKNMRAYNKKQ 116
>gi|449456873|ref|XP_004146173.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|449495123|ref|XP_004159740.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|63020536|gb|AAY26151.1| high mobility group protein [Cucumis sativus]
Length = 146
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/97 (68%), Positives = 75/97 (77%), Gaps = 6/97 (6%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SAFFVF+EEFRK +KKE+PN +V+AVGKA G KWKSMS AEKAPY +KAE
Sbjct: 34 DPNKPKRPASAFFVFMEEFRKQYKKEHPNNKSVAAVGKAGGDKWKSMSDAEKAPYINKAE 93
Query: 111 KLKSEYGKKMNAYNKK------QDGDEASDKSKSEVN 141
K K+EY K M AYNK+ +E SDKSKSEVN
Sbjct: 94 KRKTEYNKSMQAYNKRIAEGGNGAEEEESDKSKSEVN 130
>gi|116781378|gb|ABK22074.1| unknown [Picea sitchensis]
gi|224284710|gb|ACN40086.1| unknown [Picea sitchensis]
Length = 154
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 82/110 (74%), Gaps = 8/110 (7%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
+KRQ K KA KDPN+PKRPP+AFFV+LEEFRKTFK+++P+V V+AVGKA G KWK M
Sbjct: 33 NKRQAK--PKAVKDPNQPKRPPTAFFVYLEEFRKTFKQKHPDVKGVTAVGKACGDKWKEM 90
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNKKQD------GDEASDKSKSEVN 141
S AEKAPY +KA + ++EY M AY KKQ+ E S+KSKSE+N
Sbjct: 91 SEAEKAPYLAKAAQKRAEYDVTMTAYKKKQEVGVQSATPEESEKSKSELN 140
>gi|194466165|gb|ACF74313.1| high mobility group protein 2 [Arachis hypogaea]
Length = 153
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/100 (69%), Positives = 75/100 (75%), Gaps = 6/100 (6%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYES 107
A KDPNK KRPPSAFFVF+EEFRK F K++P AVSAVGKAAG KWK MS AEKAPY +
Sbjct: 38 AAKDPNKLKRPPSAFFVFMEEFRKQFNKDHPENKAVSAVGKAAGAKWKQMSDAEKAPYVA 97
Query: 108 KAEKLKSEYGKKMNAYNKKQ-----DGD-EASDKSKSEVN 141
K+EK K +Y K M AYNKKQ GD E SDKS SEVN
Sbjct: 98 KSEKRKQDYEKNMRAYNKKQAEGPTGGDEEESDKSISEVN 137
>gi|297836478|ref|XP_002886121.1| hypothetical protein ARALYDRAFT_480649 [Arabidopsis lyrata subsp.
lyrata]
gi|297331961|gb|EFH62380.1| hypothetical protein ARALYDRAFT_480649 [Arabidopsis lyrata subsp.
lyrata]
Length = 143
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 91/142 (64%), Gaps = 10/142 (7%)
Query: 23 KVGKRKAATAKLDSGSKRQGKRE-KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVT 81
K G+ KA D K +G++ KK KKDPN+PKRPPSAFFVFLE+FRK F NPN
Sbjct: 2 KGGESKAEATSTDQRLKTRGRKPGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNK 61
Query: 82 AVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK-----QDGDE-ASDK 135
+V+ VGKAAG +WKSM+ +KAPY +KAE K+EY K M YN K G+E SDK
Sbjct: 62 SVATVGKAAGARWKSMTEEDKAPYVAKAESRKTEYLKTMQQYNMKLASGTNRGEEDDSDK 121
Query: 136 SKSEVNDEDEASGEEEHQLEPE 157
SKSEV DEA EE E E
Sbjct: 122 SKSEV---DEAGSEEVFMQEEE 140
>gi|359476973|ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-like isoform 1 [Vitis
vinifera]
Length = 156
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/147 (55%), Positives = 99/147 (67%), Gaps = 14/147 (9%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG K K AA V + N R K+K A A K+ K+EK A KDPNKPKRP S
Sbjct: 1 MKGGKSK-AAEVKR--ADSNARLSVKKKGAAA----VGKKTAKKEK-AVKDPNKPKRPAS 52
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+EEFRK +K+++P +VS VGKA G KWKS+S AEKAPY +KAEK K+EY K M
Sbjct: 53 AFFVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSM 112
Query: 121 NAYNKKQ-DG-----DEASDKSKSEVN 141
AYNK+ +G +E SDKS+SEVN
Sbjct: 113 QAYNKRMAEGPTAAEEEESDKSRSEVN 139
>gi|15227862|ref|NP_179347.1| high mobility group B4 protein [Arabidopsis thaliana]
gi|145323080|ref|NP_001031364.2| high mobility group B4 protein [Arabidopsis thaliana]
gi|310947092|sp|Q42344.1|HMGB4_ARATH RecName: Full=High mobility group B protein 4; AltName: Full=High
mobility group protein G; Short=AtHMGgamma; Short=HMG
gamma; AltName: Full=Nucleosome/chromatin assembly
factor group D 04; Short=Nucleosome/chromatin assembly
factor group D 4
gi|13926177|gb|AAK49570.1|AF370562_1 putative HMG protein [Arabidopsis thaliana]
gi|4914377|gb|AAD32913.1| putative HMG protein [Arabidopsis thaliana]
gi|23297615|gb|AAN12992.1| putative HMG protein [Arabidopsis thaliana]
gi|330251557|gb|AEC06651.1| high mobility group B4 protein [Arabidopsis thaliana]
gi|330251558|gb|AEC06652.1| high mobility group B4 protein [Arabidopsis thaliana]
Length = 138
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 91/156 (58%), Gaps = 28/156 (17%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG + K A + + LK RK GK K KKDPN+PKRPPS
Sbjct: 1 MKGGESKAEATSTDQRLKTRGRKAGK--------------------KTKKDPNQPKRPPS 40
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVFLE+FRK F NPN +V+ VGKAAG +WK+M+ +KAPY +KAE K+EY K +
Sbjct: 41 AFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNV 100
Query: 121 NAYNKKQDG-----DEASDKSKSEVNDEDEASGEEE 151
YN K ++ SDKSKSEV DEA EEE
Sbjct: 101 QQYNLKLASGTNREEDDSDKSKSEV---DEAVSEEE 133
>gi|157382900|gb|ABV48885.1| high mobility group protein B3 [Physcomitrella patens]
Length = 158
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 72/97 (74%), Gaps = 6/97 (6%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPP+AFF+FL EFR+ FK+ENPNV V+AVGKA G KWKSMS AEK P+ +KA
Sbjct: 49 DPNAPKRPPTAFFIFLNEFREVFKRENPNVKGVTAVGKAGGEKWKSMSEAEKQPFMTKAV 108
Query: 111 KLKSEYGKKMNAYNKKQ------DGDEASDKSKSEVN 141
+ KSEY K ++AYNKKQ E SDK KSE+N
Sbjct: 109 QKKSEYDKTISAYNKKQDEDAEEVEAEESDKCKSEIN 145
>gi|21592453|gb|AAM64404.1| putative HMG protein [Arabidopsis thaliana]
Length = 138
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 90/156 (57%), Gaps = 28/156 (17%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG + K A + + LK RK G K KKDPN+PKRPPS
Sbjct: 1 MKGGESKAEATSTDQRLKTRGRKAGN--------------------KTKKDPNQPKRPPS 40
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVFLE+FRK F NPN +V+ VGKAAG +WKSM+ +KAPY +KAE K+EY K +
Sbjct: 41 AFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKSMTDEDKAPYVAKAESRKTEYIKNV 100
Query: 121 NAYNKKQDG-----DEASDKSKSEVNDEDEASGEEE 151
YN K ++ SDKSKSEV DEA EEE
Sbjct: 101 QQYNLKLASGTNREEDDSDKSKSEV---DEAVSEEE 133
>gi|295913099|gb|ADG57812.1| transcription factor [Lycoris longituba]
Length = 120
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/103 (66%), Positives = 79/103 (76%), Gaps = 8/103 (7%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
KA KDPNKPKR PSAFFVF+E+FRK FK++NP +V+AVGKA G +WKSMS AEKAP+
Sbjct: 2 KAGKDPNKPKRAPSAFFVFMEDFRKEFKEKNPKNKSVAAVGKAGGERWKSMSDAEKAPFV 61
Query: 107 SKAEKLKSEYGKKMNAYNK----KQDG----DEASDKSKSEVN 141
KAEKLK+EY KKM AYNK K D +E SDKSKSEVN
Sbjct: 62 KKAEKLKAEYEKKMVAYNKGEKVKDDNADVEEEESDKSKSEVN 104
>gi|295913458|gb|ADG57979.1| transcription factor [Lycoris longituba]
Length = 179
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 64/77 (83%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPNKPKRPPSAFFVF+EEFRK FK++NPN VS VGKAAG KWKSMS EKAPYE+KA
Sbjct: 59 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 118
Query: 110 EKLKSEYGKKMNAYNKK 126
K K+EY K M AYNKK
Sbjct: 119 AKRKAEYNKTMVAYNKK 135
>gi|346467547|gb|AEO33618.1| hypothetical protein [Amblyomma maculatum]
Length = 146
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/128 (57%), Positives = 88/128 (68%), Gaps = 13/128 (10%)
Query: 22 RKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVT 81
+ G KAA KL + ++GK KA KDPNKPKR PSAFFVFL+EFRK FK++NP
Sbjct: 14 KNAGSAKAADTKL---AVKKGKT--KAAKDPNKPKRAPSAFFVFLDEFRKEFKEKNPENK 68
Query: 82 AVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ--------DGDEAS 133
+V+AV KA G +WKSMS A+K PY SKA+KLK EY KK+ AY K Q + DE S
Sbjct: 69 SVAAVTKAGGARWKSMSDADKEPYVSKADKLKVEYQKKVKAYEKGQAHEPEDNAEMDEES 128
Query: 134 DKSKSEVN 141
DKSKSEVN
Sbjct: 129 DKSKSEVN 136
>gi|357484151|ref|XP_003612362.1| HMG1/2-like protein [Medicago truncatula]
gi|355513697|gb|AES95320.1| HMG1/2-like protein [Medicago truncatula]
Length = 140
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 87/129 (67%), Gaps = 15/129 (11%)
Query: 18 KPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKEN 77
KP D ++ ++ A T G ++ K KDPNKPKRPPSAFFVF+ EFR+ FKKEN
Sbjct: 9 KPADNRLKRKGAGT----------GTKQSKKAKDPNKPKRPPSAFFVFMSEFRERFKKEN 58
Query: 78 PNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYN-----KKQDGDEA 132
P+ +V+ VGKA G +WK++S A+KAP+ +KA+KLK EY K M AYN K +E
Sbjct: 59 PSNKSVAVVGKAGGKEWKALSDADKAPFIAKADKLKEEYEKTMRAYNMGITEKNASEEEG 118
Query: 133 SDKSKSEVN 141
S+KSKSEVN
Sbjct: 119 SEKSKSEVN 127
>gi|295913696|gb|ADG58089.1| transcription factor [Lycoris longituba]
Length = 183
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/76 (76%), Positives = 63/76 (82%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRPPSAFFVF+EEFRK FK++NPN VS VGKAAG KWKSMS AEKAPYE+KA
Sbjct: 63 DPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSAAEKAPYEAKAA 122
Query: 111 KLKSEYGKKMNAYNKK 126
K K +Y K M AYNKK
Sbjct: 123 KRKVDYNKTMVAYNKK 138
>gi|18394900|ref|NP_564124.1| high mobility group B3 protein [Arabidopsis thaliana]
gi|75220405|sp|P93047.1|HMGB3_ARATH RecName: Full=High mobility group B protein 3; AltName: Full=High
mobility group protein B 2; Short=AtHMGbeta2; Short=HMG
beta 2; AltName: Full=Nucleosome/chromatin assembly
factor group D 03; Short=Nucleosome/chromatin assembly
factor group D 3
gi|15724174|gb|AAL06479.1|AF411789_1 At1g20690/F2D10_15 [Arabidopsis thaliana]
gi|1694976|emb|CAA70691.1| HMG1 [Arabidopsis thaliana]
gi|2832361|emb|CAA74402.1| HMG protein [Arabidopsis thaliana]
gi|20453325|gb|AAM19901.1| At1g20690/F2D10_15 [Arabidopsis thaliana]
gi|21537072|gb|AAM61413.1| unknown [Arabidopsis thaliana]
gi|22530942|gb|AAM96975.1| expressed protein [Arabidopsis thaliana]
gi|23198424|gb|AAN15739.1| expressed protein [Arabidopsis thaliana]
gi|332191888|gb|AEE30009.1| high mobility group B3 protein [Arabidopsis thaliana]
Length = 141
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/110 (61%), Positives = 83/110 (75%), Gaps = 4/110 (3%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
S +K+ K K A KDPNKPKRP SAFFVF+E+FR T+K+E+P +V+AVGKA G KWK
Sbjct: 16 SVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWK 75
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYNKK-QDG---DEASDKSKSEVN 141
S+S +EKAPY +KA+K K EY K M AYNKK ++G DE SDKS SEVN
Sbjct: 76 SLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEESDKSVSEVN 125
>gi|145328748|ref|NP_001077909.1| high mobility group B4 protein [Arabidopsis thaliana]
gi|222423535|dbj|BAH19737.1| AT2G17560 [Arabidopsis thaliana]
gi|330251559|gb|AEC06653.1| high mobility group B4 protein [Arabidopsis thaliana]
Length = 134
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 91/156 (58%), Gaps = 28/156 (17%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG + K A + + LK RK GK K KKDPN+PKRPPS
Sbjct: 1 MKGGESKAEATSTDQRLKTRGRKAGK--------------------KTKKDPNQPKRPPS 40
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVFLE+FRK F NPN +V+ VGKAAG +WK+M+ +KAPY +KAE K+EY K +
Sbjct: 41 AFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNV 100
Query: 121 NAYNKKQDG-----DEASDKSKSEVNDEDEASGEEE 151
YN K ++ SDKSKSEV DEA E++
Sbjct: 101 QQYNLKLASGTNREEDDSDKSKSEV---DEAEAEDD 133
>gi|308569660|gb|ADO34795.1| high mobility group box 1 protein [Gossypium hirsutum]
Length = 142
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 73/96 (76%), Gaps = 5/96 (5%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SAFFVF+EEFR+ +KK++P +V+AVGKA G KWKS+S AEKAPY +KAE
Sbjct: 31 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKWKSLSEAEKAPYVAKAE 90
Query: 111 KLKSEYGKKMNAYNKKQ-----DGDEASDKSKSEVN 141
K K EY K M AYNK+Q D D SDKS SEVN
Sbjct: 91 KRKVEYEKNMKAYNKRQAEGPKDEDVESDKSVSEVN 126
>gi|295913708|gb|ADG58095.1| transcription factor [Lycoris longituba]
Length = 190
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 87/126 (69%), Gaps = 9/126 (7%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG K K A S++A + R KRKAA + K+ ++ K KDPNKPKRPPS
Sbjct: 29 MKGGKSK--ADTSKKA---DARLSVKRKAA----EKPVKKPAVKKAKEGKDPNKPKRPPS 79
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+EEFRK FK++NPN VS VGKAAG KWKSMS EKAPYE+KA K K+EY K M
Sbjct: 80 AFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKAAKRKAEYNKTM 139
Query: 121 NAYNKK 126
AYNKK
Sbjct: 140 VAYNKK 145
>gi|295913307|gb|ADG57910.1| transcription factor [Lycoris longituba]
Length = 138
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/76 (76%), Positives = 63/76 (82%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRPPSAFFVF+EEFRK FK++NPN VS VGKAAG KWKSMS AEKAPYE+KA
Sbjct: 18 DPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSAAEKAPYEAKAA 77
Query: 111 KLKSEYGKKMNAYNKK 126
K K +Y K M AYNKK
Sbjct: 78 KRKVDYNKTMVAYNKK 93
>gi|346467231|gb|AEO33460.1| hypothetical protein [Amblyomma maculatum]
Length = 115
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K +KDPNKPKRPP+ FFVF+E FRK +K+ +P +V+ VGKA G KWKS+S +EKA
Sbjct: 2 EGKGEKDPNKPKRPPTGFFVFMEGFRKQYKEAHPKNKSVAVVGKAGGEKWKSLSESEKAV 61
Query: 105 YESKAEKLKSEYGKKMNAYNKKQDGD-EASDKSKSEVN 141
+ SKAEKL+SEY KK++AY K Q D E SDKSKSEVN
Sbjct: 62 FLSKAEKLRSEYQKKIDAYEKGQHVDEEESDKSKSEVN 99
>gi|217075707|gb|ACJ86213.1| unknown [Medicago truncatula]
gi|388513073|gb|AFK44598.1| unknown [Medicago truncatula]
Length = 142
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 87/124 (70%), Gaps = 8/124 (6%)
Query: 26 KRKAATAKLDSGSKRQG-----KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV 80
K KA + D+ KR+G K+ KKA KDPNKPKRPPSAFFVF+ +FR+ +KK++PN
Sbjct: 3 KVKADSKPADNRLKRKGAGAGRKQTKKAAKDPNKPKRPPSAFFVFMSDFREQYKKDHPNN 62
Query: 81 TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDG---DEASDKSK 137
+V+AVGKA G WKSMS +KAPY ++A K K EY AYNKK +G ++ SDKSK
Sbjct: 63 KSVAAVGKACGEAWKSMSEEDKAPYAARALKKKEEYEVATQAYNKKLEGKDEEDGSDKSK 122
Query: 138 SEVN 141
SEVN
Sbjct: 123 SEVN 126
>gi|295913700|gb|ADG58091.1| transcription factor [Lycoris longituba]
Length = 162
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 85/126 (67%), Gaps = 9/126 (7%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG K K + + K + R KRKAA + K+ ++ K KDPNKPKRPPS
Sbjct: 1 MKGGKSK-----ADTSKKADARLSVKRKAA----EKPVKKPAVKKAKEGKDPNKPKRPPS 51
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+EEFRK FK++NPN VS VGKAAG KWKSMS EKAPYE+KA K K+EY K M
Sbjct: 52 AFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKAAKRKAEYNKTM 111
Query: 121 NAYNKK 126
AYNKK
Sbjct: 112 VAYNKK 117
>gi|295913475|gb|ADG57987.1| transcription factor [Lycoris longituba]
Length = 162
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 85/126 (67%), Gaps = 9/126 (7%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG K K + + K + R KRKAA + K+ ++ K KDPNKPKRPPS
Sbjct: 1 MKGGKSK-----ADTSKKADARLSVKRKAA----EKPVKKPVVKKAKEGKDPNKPKRPPS 51
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+EEFRK FK++NPN VS VGKAAG KWKSMS EKAPYE+KA K K+EY K M
Sbjct: 52 AFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKAAKRKAEYNKTM 111
Query: 121 NAYNKK 126
AYNKK
Sbjct: 112 VAYNKK 117
>gi|168028752|ref|XP_001766891.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681870|gb|EDQ68293.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 93/151 (61%), Gaps = 15/151 (9%)
Query: 2 KGAKGKGAAR---VSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
KG KG GA V ++ K D+ + KRK + K + + K KDPN PKRP
Sbjct: 5 KGKKGVGAVAKRDVKEKVTKVQDKDIKKRKGPVKE----PKGRKAKSAKKAKDPNAPKRP 60
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
+AFF+FL EFR+ FKKENPNV V+AVGKA G KWKSMS AEK PY KA + KSEY K
Sbjct: 61 ATAFFIFLNEFREVFKKENPNVKGVAAVGKAGGEKWKSMSEAEKQPYMQKAVQKKSEYDK 120
Query: 119 KMNAYNKKQ--------DGDEASDKSKSEVN 141
++AYNKKQ E SDKSKSE+N
Sbjct: 121 TLSAYNKKQDDDEEDEEVEAEESDKSKSEIN 151
>gi|194466163|gb|ACF74312.1| high mobility group protein 1 [Arachis hypogaea]
Length = 139
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 86/119 (72%), Gaps = 5/119 (4%)
Query: 28 KAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVG 87
KAA +L G+++ K KDPNKPKRPPSAFFVF+ EFR+ +KKE+PN +V+ VG
Sbjct: 9 KAADNRLKRKGAGTGRKQAKKAKDPNKPKRPPSAFFVFMSEFREQYKKEHPNNKSVAVVG 68
Query: 88 KAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA-----SDKSKSEVN 141
KA G +WKSMS A+KAPY++KAEK K EY + M AYNKKQ+ A SDKSKSEVN
Sbjct: 69 KAGGDRWKSMSDADKAPYQAKAEKKKEEYERTMQAYNKKQESKGASEEDESDKSKSEVN 127
>gi|436424|emb|CAA54168.1| HMG 1 protein [Pisum sativum]
Length = 154
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/127 (56%), Positives = 85/127 (66%), Gaps = 10/127 (7%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG K KG ++ ++ L N +K A A +GK KDPNKPKRPPS
Sbjct: 1 MKGGKSKGESKKAETKLAVN------KKGAPATKGGKKPAKGKEP----KDPNKPKRPPS 50
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+E+FRK FKK N + AVSAVGKAAG KWKSM+ AEKAPY +KAEK K+EY K M
Sbjct: 51 AFFVFMEDFRKQFKKGNADNKAVSAVGKAAGAKWKSMTEAEKAPYAAKAEKRKAEYEKSM 110
Query: 121 NAYNKKQ 127
+YNKKQ
Sbjct: 111 KSYNKKQ 117
>gi|115470082|ref|NP_001058640.1| Os06g0728000 [Oryza sativa Japonica Group]
gi|3885888|gb|AAC78104.1| high mobility group protein [Oryza sativa Japonica Group]
gi|23345287|gb|AAN28722.1| HMG1 protein [Oryza sativa Indica Group]
gi|30267833|gb|AAP21609.1| HMGB1 [Oryza sativa Indica Group]
gi|54291150|dbj|BAD61823.1| HMGB1 [Oryza sativa Japonica Group]
gi|113596680|dbj|BAF20554.1| Os06g0728000 [Oryza sativa Japonica Group]
gi|213959190|gb|ACJ54929.1| HMG protein [Oryza sativa Japonica Group]
gi|215692803|dbj|BAG88247.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636260|gb|EEE66392.1| hypothetical protein OsJ_22728 [Oryza sativa Japonica Group]
Length = 157
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 85/125 (68%), Gaps = 13/125 (10%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKGAK KGAA KP+ + K K A G R+ KA KDPNKPKR PS
Sbjct: 1 MKGAKSKGAA-------KPDAKLAVKSKGAEKPAAKG------RKGKAGKDPNKPKRAPS 47
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+EEFRK FK++NP +V+AVGKAAG +WKS++ A+KAPY +KA KLK+EY K +
Sbjct: 48 AFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLTEADKAPYVAKANKLKAEYNKAI 107
Query: 121 NAYNK 125
AYNK
Sbjct: 108 AAYNK 112
>gi|157382898|gb|ABV48884.1| high mobility group protein B2 [Physcomitrella patens]
Length = 165
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 92/151 (60%), Gaps = 15/151 (9%)
Query: 2 KGAKGKGAAR---VSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
KG KG GA V ++ K D+ + KRK + K + K KDPN PKRP
Sbjct: 5 KGKKGVGAVAKRDVKEKVTKVQDKDIKKRKGPVKE----PKGGKAKSAKKAKDPNAPKRP 60
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
+AFF+FL EFR+ FKKENPNV V+AVGKA G KWKSMS AEK PY KA + KSEY K
Sbjct: 61 ATAFFIFLNEFREVFKKENPNVKGVAAVGKAGGEKWKSMSEAEKQPYMQKAVQKKSEYDK 120
Query: 119 KMNAYNKKQ--------DGDEASDKSKSEVN 141
++AYNKKQ E SDKSKSE+N
Sbjct: 121 TLSAYNKKQDDDEEDEEVEAEESDKSKSEIN 151
>gi|359476975|ref|XP_003631923.1| PREDICTED: high mobility group B2 protein-like isoform 2 [Vitis
vinifera]
Length = 125
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 89/131 (67%), Gaps = 8/131 (6%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG K K AA V + N R K+K A A K+ K+EK A KDPNKPKRP S
Sbjct: 1 MKGGKSK-AAEVKR--ADSNARLSVKKKGAAA----VGKKTAKKEK-AVKDPNKPKRPAS 52
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+EEFRK +K+++P +VS VGKA G KWKS+S AEKAPY +KAEK K+EY K M
Sbjct: 53 AFFVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSM 112
Query: 121 NAYNKKQDGDE 131
AYNK+ + D+
Sbjct: 113 QAYNKRMEEDD 123
>gi|225457566|ref|XP_002272299.1| PREDICTED: high mobility group-like isoform 1 [Vitis vinifera]
gi|359491843|ref|XP_003634333.1| PREDICTED: high mobility group-like isoform 2 [Vitis vinifera]
gi|297745562|emb|CBI40727.3| unnamed protein product [Vitis vinifera]
Length = 153
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 74/98 (75%), Gaps = 7/98 (7%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SAFFVF+EEFRK +K+++P+ +VS VGKA G KWKSMS AEKAPY +KAE
Sbjct: 40 DPNKPKRPASAFFVFMEEFRKQYKEKHPSNKSVSVVGKAGGDKWKSMSEAEKAPYVAKAE 99
Query: 111 KLKSEYGKKMNAYNKKQ-DGDEA------SDKSKSEVN 141
K K EY K M AYNKKQ +G + S+KS SEVN
Sbjct: 100 KRKVEYEKNMKAYNKKQAEGTKVVEEEDESEKSLSEVN 137
>gi|729737|sp|P40620.1|HMGL_VICFA RecName: Full=HMG1/2-like protein
Length = 149
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 73/95 (76%), Gaps = 3/95 (3%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPNKPKRPPSAFFVF+ +FR+ +KK++PN +V+AVGKA G +WKS+S EKAPY +A
Sbjct: 40 KDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRA 99
Query: 110 EKLKSEYGKKMNAYNKKQDG---DEASDKSKSEVN 141
K K EY + AYNKK +G +E SDKSKSEVN
Sbjct: 100 LKKKEEYEITLQAYNKKLEGKDDEEGSDKSKSEVN 134
>gi|308569654|gb|ADO34793.1| high mobility group box 2 protein [Gossypium hirsutum]
Length = 146
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 74/102 (72%), Gaps = 3/102 (2%)
Query: 29 AATAKLDSGSK---RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA 85
A +AKL K + GK+ KA KDPNKPKRP SAFFVF+EEFR+ +KKE+P +V+A
Sbjct: 10 AKSAKLSVNKKSTTKAGKKSGKAAKDPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAA 69
Query: 86 VGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
VGKA G KWKS+S AEK PY KAEK K EY K M AYNK+Q
Sbjct: 70 VGKAGGDKWKSLSEAEKRPYVDKAEKRKVEYEKNMKAYNKRQ 111
>gi|413935042|gb|AFW69593.1| high mobility group protein1 [Zea mays]
Length = 220
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 84/129 (65%), Gaps = 22/129 (17%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGK----REKKAKKDPNKPK 56
MKGAK KGAA+ A AKL SK K R+ KA KDPNKPK
Sbjct: 1 MKGAKSKGAAK------------------ADAKLAVKSKGAEKPAKGRKGKAGKDPNKPK 42
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
R PSAFFVF+EEFRK FK++NP +V+AVGKAAG +WKS+S ++KAPY +KA KLK EY
Sbjct: 43 RAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEY 102
Query: 117 GKKMNAYNK 125
K + AYNK
Sbjct: 103 NKAIAAYNK 111
>gi|397396|emb|CAA46876.1| DNA-binding protein [Zea mays]
Length = 168
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 84/129 (65%), Gaps = 22/129 (17%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGK----REKKAKKDPNKPK 56
MKGAK KGAA+ A AKL SK K R+ KA KDPNKPK
Sbjct: 12 MKGAKSKGAAK------------------ADAKLAVKSKGAEKPAKGRKGKAGKDPNKPK 53
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
R PSAFFVF+EEFRK FK++NP +V+AVGKAAG +WKS+S ++KAPY +KA KLK EY
Sbjct: 54 RAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEY 113
Query: 117 GKKMNAYNK 125
K + AYNK
Sbjct: 114 NKAIAAYNK 122
>gi|293335943|ref|NP_001167650.1| high mobility group protein1 [Zea mays]
gi|123378|sp|P27347.1|MNB1B_MAIZE RecName: Full=DNA-binding protein MNB1B; AltName: Full=HMG1-like
protein
gi|22329|emb|CAA41220.1| high mobility group protein [Zea mays]
gi|5441502|emb|CAB46752.1| HMGa protein [Zea mays]
gi|22347617|gb|AAM95942.1| nucleosome/chromatin assembly factor group D protein [Zea mays]
gi|194701148|gb|ACF84658.1| unknown [Zea mays]
gi|194702316|gb|ACF85242.1| unknown [Zea mays]
gi|194703290|gb|ACF85729.1| unknown [Zea mays]
gi|195606194|gb|ACG24927.1| DNA-binding protein MNB1B [Zea mays]
gi|195612638|gb|ACG28149.1| DNA-binding protein MNB1B [Zea mays]
gi|195618138|gb|ACG30899.1| DNA-binding protein MNB1B [Zea mays]
gi|195618904|gb|ACG31282.1| DNA-binding protein MNB1B [Zea mays]
gi|195619012|gb|ACG31336.1| DNA-binding protein MNB1B [Zea mays]
gi|195619124|gb|ACG31392.1| DNA-binding protein MNB1B [Zea mays]
gi|195638824|gb|ACG38880.1| DNA-binding protein MNB1B [Zea mays]
gi|195642004|gb|ACG40470.1| DNA-binding protein MNB1B [Zea mays]
gi|223972731|gb|ACN30553.1| unknown [Zea mays]
gi|223972797|gb|ACN30586.1| unknown [Zea mays]
gi|223973279|gb|ACN30827.1| unknown [Zea mays]
gi|223974975|gb|ACN31675.1| unknown [Zea mays]
gi|413935043|gb|AFW69594.1| high mobility group protein1 [Zea mays]
Length = 157
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 84/129 (65%), Gaps = 22/129 (17%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGK----REKKAKKDPNKPK 56
MKGAK KGAA+ A AKL SK K R+ KA KDPNKPK
Sbjct: 1 MKGAKSKGAAK------------------ADAKLAVKSKGAEKPAKGRKGKAGKDPNKPK 42
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
R PSAFFVF+EEFRK FK++NP +V+AVGKAAG +WKS+S ++KAPY +KA KLK EY
Sbjct: 43 RAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEY 102
Query: 117 GKKMNAYNK 125
K + AYNK
Sbjct: 103 NKAIAAYNK 111
>gi|295913393|gb|ADG57949.1| transcription factor [Lycoris longituba]
Length = 162
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 86/127 (67%), Gaps = 11/127 (8%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVG-KRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
MKG K K + K D K+ KRKAA + +K+ ++ KA DPNKPKRPP
Sbjct: 1 MKGGKSK------PDTSKKADAKLSVKRKAA----EKPAKKPAVKKAKAGTDPNKPKRPP 50
Query: 60 SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKK 119
SAFFVF+EEFRK FK++NPN VS VGKAAG KWKSMS AEKAPYE+KA K K +Y K
Sbjct: 51 SAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSAAEKAPYEAKAAKRKVDYNKT 110
Query: 120 MNAYNKK 126
M AYNKK
Sbjct: 111 MVAYNKK 117
>gi|357640485|gb|AET87126.1| high mobility group B2 protein [Brassica napus]
Length = 145
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 76/96 (79%), Gaps = 5/96 (5%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SAFFVF+E+FR+T+KK++PN +V+AVGKA G KWKS+S +EKAP+ +KA+
Sbjct: 34 DPNKPKRPASAFFVFMEDFRQTYKKDHPNNKSVAAVGKAGGEKWKSLSDSEKAPFVAKAD 93
Query: 111 KLKSEYGKKMNAYNKK-----QDGDEASDKSKSEVN 141
K K EY K M AYNKK ++ +E SDKS SEVN
Sbjct: 94 KRKVEYEKTMKAYNKKLEEGPKEDEEESDKSVSEVN 129
>gi|295913526|gb|ADG58011.1| transcription factor [Lycoris longituba]
Length = 171
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/104 (67%), Positives = 77/104 (74%), Gaps = 12/104 (11%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPNKPKRPPSAFFVF+EEFRK FK++NPN VS VGKAAG KWKSMS EKAPYE+KA
Sbjct: 54 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 113
Query: 110 EKLKSEYGKKMNAYNKKQ-DG-----------DEASDKSKSEVN 141
K K+EY K M AYNKK DG +E SDKSKSEV+
Sbjct: 114 AKRKAEYNKTMVAYNKKLADGGGKKSVAEEDDEEESDKSKSEVH 157
>gi|304651500|gb|ADM47612.1| high mobility group protein [Hevea brasiliensis]
Length = 146
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 66/81 (81%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
KA KDPNKPKRP SAFFVF+EEFR+ +KKE+P +V+AVGKA G KWKS+S AEKAPY
Sbjct: 31 KAAKDPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSEAEKAPYV 90
Query: 107 SKAEKLKSEYGKKMNAYNKKQ 127
+KAEK K EY KK+ AYNK Q
Sbjct: 91 AKAEKRKVEYEKKLKAYNKGQ 111
>gi|224083306|ref|XP_002306980.1| high mobility group family [Populus trichocarpa]
gi|222856429|gb|EEE93976.1| high mobility group family [Populus trichocarpa]
Length = 160
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 67/81 (82%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
KA KDPNKPKRP SAFFVF+EEFR+ +K+E+P +V+AVGKA G KWKS+S AEKAP+
Sbjct: 36 KAAKDPNKPKRPASAFFVFMEEFREQYKREHPKNKSVAAVGKAGGDKWKSLSEAEKAPFV 95
Query: 107 SKAEKLKSEYGKKMNAYNKKQ 127
+KA+K K EY KKM AYNK+Q
Sbjct: 96 AKADKRKVEYEKKMKAYNKEQ 116
>gi|297736623|emb|CBI25494.3| unnamed protein product [Vitis vinifera]
Length = 128
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/102 (69%), Positives = 81/102 (79%), Gaps = 3/102 (2%)
Query: 1 MKGAKGKGAARV-SQEALKPN-DRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
MK KGK AAR +EALKP DR++GKRKAA K D +K+ K+EK AKKDPNKPKRP
Sbjct: 25 MKVTKGKAAARKDKKEALKPVEDRRLGKRKAAL-KADKSTKKLAKKEKLAKKDPNKPKRP 83
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
PSAFFVFLEEFRK +K+E+PNV AVSAVGKA G KWKS+S A
Sbjct: 84 PSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEA 125
>gi|224065681|ref|XP_002301918.1| high mobility group family [Populus trichocarpa]
gi|222843644|gb|EEE81191.1| high mobility group family [Populus trichocarpa]
Length = 152
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 64/77 (83%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SAFFVF+EEFR+ +KKE+P +V+AVGKA G KWKS+S AEKAPY +KA+
Sbjct: 39 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSAAEKAPYVAKAD 98
Query: 111 KLKSEYGKKMNAYNKKQ 127
K K EY KKM AYNK+Q
Sbjct: 99 KRKVEYEKKMKAYNKEQ 115
>gi|357123079|ref|XP_003563240.1| PREDICTED: DNA-binding protein MNB1B-like [Brachypodium distachyon]
Length = 160
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 84/125 (67%), Gaps = 13/125 (10%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKGAK KG A+K + + K K A G R+ KA KDPNKPKR PS
Sbjct: 1 MKGAKSKG-------AVKADTKLAVKSKGAEKPAAKG------RKGKAGKDPNKPKRAPS 47
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF++EFRK FK++NP +V+AVGKAAG +WK++S ++KAPY +KA KLK+EY K +
Sbjct: 48 AFFVFMDEFRKEFKEKNPKNKSVAAVGKAAGERWKTLSESDKAPYVAKANKLKAEYNKAI 107
Query: 121 NAYNK 125
AYNK
Sbjct: 108 AAYNK 112
>gi|302754440|ref|XP_002960644.1| hypothetical protein SELMODRAFT_75453 [Selaginella moellendorffii]
gi|300171583|gb|EFJ38183.1| hypothetical protein SELMODRAFT_75453 [Selaginella moellendorffii]
Length = 134
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 75/98 (76%), Gaps = 3/98 (3%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PK+P +AFF+FLEEFR+T+KK++P+V V+A+GKA G WKS+S EK PY +KA
Sbjct: 32 DPNQPKKPATAFFIFLEEFRQTYKKDHPDVKGVAAIGKAGGDMWKSLSDKEKEPYHAKAA 91
Query: 111 KLKSEYGKKMNAYN-KKQDGD--EASDKSKSEVNDEDE 145
K K++Y K + AYN KK+DG E+ KSKS ND+DE
Sbjct: 92 KRKADYDKDLEAYNKKKEDGSAGESEVKSKSAGNDDDE 129
>gi|118488125|gb|ABK95882.1| unknown [Populus trichocarpa]
Length = 151
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 64/77 (83%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SAFFVF+EEFR+ +KKE+P +V+AVGKA G KWKS+S AEKAPY +KA+
Sbjct: 39 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSAAEKAPYVAKAD 98
Query: 111 KLKSEYGKKMNAYNKKQ 127
K K EY KKM AYNK+Q
Sbjct: 99 KRKVEYEKKMKAYNKEQ 115
>gi|371721822|gb|AEX55234.1| HMG transcription factor [Allium sativum]
Length = 115
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
Query: 55 PKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKS 114
PKRPPSAFFVF+E+FRK FK++NP+ VSAVGKAAG KWKS++ AEKAPYE+KA K K+
Sbjct: 2 PKRPPSAFFVFMEDFRKIFKEKNPDNKQVSAVGKAAGDKWKSLTAAEKAPYEAKAAKRKA 61
Query: 115 EYGKKMNAYNKKQDGDEASDKS 136
EY K M AYNKK D AS KS
Sbjct: 62 EYTKTMAAYNKKL-SDGASKKS 82
>gi|302803281|ref|XP_002983394.1| hypothetical protein SELMODRAFT_117986 [Selaginella moellendorffii]
gi|300149079|gb|EFJ15736.1| hypothetical protein SELMODRAFT_117986 [Selaginella moellendorffii]
Length = 123
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 75/101 (74%), Gaps = 6/101 (5%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PK+P +AFF+FLEEFR+T+KK++P+V V+A+GKA G WKS+S EK PY +KA
Sbjct: 18 DPNQPKKPATAFFIFLEEFRQTYKKDHPDVKGVAAIGKAGGDMWKSLSDKEKEPYHAKAA 77
Query: 111 KLKSEYGKKMNAYNKK----QDGD--EASDKSKSEVNDEDE 145
K K++Y K + AYNKK +DG E+ KSKS ND+DE
Sbjct: 78 KRKADYDKDLEAYNKKKEEEEDGSAGESEVKSKSAGNDDDE 118
>gi|218198917|gb|EEC81344.1| hypothetical protein OsI_24530 [Oryza sativa Indica Group]
Length = 163
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 81/120 (67%), Gaps = 13/120 (10%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKGAK KGAA KP+ + K K A G R+ KA KDPNKPKR PS
Sbjct: 1 MKGAKSKGAA-------KPDAKLAVKSKGAEKPAAKG------RKGKAGKDPNKPKRAPS 47
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+EEFRK FK++NP +V+AVGKAAG +WKS++ A+KAPY +KA KLK+EY + +
Sbjct: 48 AFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLTEADKAPYVAKANKLKAEYNRPL 107
>gi|79318295|ref|NP_001031075.1| high mobility group B3 protein [Arabidopsis thaliana]
gi|332191889|gb|AEE30010.1| high mobility group B3 protein [Arabidopsis thaliana]
Length = 147
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 70/91 (76%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
S +K+ K K A KDPNKPKRP SAFFVF+E+FR T+K+E+P +V+AVGKA G KWK
Sbjct: 16 SVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWK 75
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
S+S +EKAPY +KA+K K EY K M AYNKK
Sbjct: 76 SLSDSEKAPYVAKADKRKVEYEKNMKAYNKK 106
>gi|18419623|gb|AAL69379.1|AF462216_1 HMG-domain containing protein [Narcissus pseudonarcissus]
Length = 106
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/69 (76%), Positives = 59/69 (85%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
KA+KDPNKPKRPPSAFFVF+EEFRK FK++NPN VS VGKAAG KWKSMS EKAPYE
Sbjct: 38 KAEKDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYE 97
Query: 107 SKAEKLKSE 115
+KA K K+E
Sbjct: 98 AKAAKRKAE 106
>gi|308569658|gb|ADO34794.1| high mobility group box 4 protein [Gossypium hirsutum]
Length = 148
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 62/77 (80%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SAFFVF+EEFR+ +KKE+P +V+AVGKA G KWKS+S AEKAPY +KAE
Sbjct: 35 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGEKWKSLSDAEKAPYIAKAE 94
Query: 111 KLKSEYGKKMNAYNKKQ 127
K K EY K M AY K+Q
Sbjct: 95 KRKVEYEKNMKAYTKRQ 111
>gi|302796105|ref|XP_002979815.1| hypothetical protein SELMODRAFT_18312 [Selaginella moellendorffii]
gi|302807533|ref|XP_002985461.1| hypothetical protein SELMODRAFT_18313 [Selaginella moellendorffii]
gi|300146924|gb|EFJ13591.1| hypothetical protein SELMODRAFT_18313 [Selaginella moellendorffii]
gi|300152575|gb|EFJ19217.1| hypothetical protein SELMODRAFT_18312 [Selaginella moellendorffii]
Length = 84
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 67/84 (79%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K+EKKA KDPN PKRPP+AFFVFLE FR+ +K+++P+V V+AVGKAAG KW MS +EK
Sbjct: 1 KKEKKASKDPNLPKRPPTAFFVFLESFRQQYKEDHPDVKGVAAVGKAAGDKWSKMSESEK 60
Query: 103 APYESKAEKLKSEYGKKMNAYNKK 126
A Y +KA +L+++Y + M AY KK
Sbjct: 61 AVYVNKAAQLRADYAESMAAYKKK 84
>gi|295913113|gb|ADG57819.1| transcription factor [Lycoris longituba]
Length = 108
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 70/90 (77%)
Query: 34 LDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGK 93
+ G+ ++ +++ KA KDPNKPKR SAFFVF+E FRK FK++NP +V+AVGKA G K
Sbjct: 19 VKKGAPKKTEKKVKAGKDPNKPKRAASAFFVFMEGFRKEFKEKNPKNKSVAAVGKAGGEK 78
Query: 94 WKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
WKSMS AEKAP+ KAEKLK+EY KKM AY
Sbjct: 79 WKSMSDAEKAPFVKKAEKLKAEYEKKMVAY 108
>gi|255539248|ref|XP_002510689.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223551390|gb|EEF52876.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 145
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 63/77 (81%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SAFFVF+EEFR+ +KKE+P +V+AVGKA G +WKSMS +EKAP+ +KAE
Sbjct: 34 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDRWKSMSESEKAPFVAKAE 93
Query: 111 KLKSEYGKKMNAYNKKQ 127
K K EY KK+ AYNK Q
Sbjct: 94 KRKIEYEKKLKAYNKGQ 110
>gi|729738|sp|P40621.1|HMGL_WHEAT RecName: Full=HMG1/2-like protein
gi|21803|emb|CAA77641.1| high mobility group protein [Triticum aestivum]
gi|114145392|dbj|BAF30985.1| high mobility globular protein [Triticum aestivum]
Length = 161
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 82/130 (63%), Gaps = 23/130 (17%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSK-----RQGKREKKAKKDPNKP 55
MKGAK KGAA+ A AKL SK ++ KA KDPNKP
Sbjct: 1 MKGAKSKGAAK------------------ADAKLAVKSKGAEKPAAKGKKGKAGKDPNKP 42
Query: 56 KRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSE 115
KR PSAFFVF+ EFR+ FK++NP +V+AVGKAAG +WKS+S +EKAPY +KA KLK E
Sbjct: 43 KRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGE 102
Query: 116 YGKKMNAYNK 125
Y K + AYNK
Sbjct: 103 YNKAIAAYNK 112
>gi|950053|emb|CAA90679.1| HMG1/2-like protein [Hordeum vulgare subsp. vulgare]
Length = 160
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 65/86 (75%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKR PSAFFVF+ EFR+ FK++NP +V+AVGKAAG +WKS+S +EKAP+ +KA
Sbjct: 38 DPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPFVAKAN 97
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDKS 136
KLK EY K + +YNK + A K+
Sbjct: 98 KLKGEYNKAIASYNKGESTTAAPKKA 123
>gi|449468356|ref|XP_004151887.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|449517965|ref|XP_004166014.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
Length = 142
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 78/134 (58%), Gaps = 17/134 (12%)
Query: 18 KPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKEN 77
KPN +K+ +RKA + K K KKD N PKRP + FFVF+EEFRKT+K++
Sbjct: 13 KPNPQKLKQRKA-----------EMKSTKSKKKDQNAPKRPATTFFVFMEEFRKTYKEQF 61
Query: 78 PNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA----- 132
P+ A VGK G KWKSMS AEKAPY KA K K+EY + AY + +
Sbjct: 62 PDAKAGPVVGKVGGEKWKSMSDAEKAPYAEKALKRKAEYEIALEAYKNNLNCPQNHRMPT 121
Query: 133 -SDKSKSEVNDEDE 145
S KS SEVND+ E
Sbjct: 122 ESQKSTSEVNDDTE 135
>gi|47027098|gb|AAT08762.1| HMG transcription factor [Hyacinthus orientalis]
Length = 158
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 62/81 (76%), Gaps = 6/81 (7%)
Query: 50 KDPNKPKR---PPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
KDPNKPKR AFFVF+E+FRK FK++NPN VS VGKA GKWK+MS AEKAP+E
Sbjct: 38 KDPNKPKRPPS---AFFVFMEDFRKQFKEKNPNNKQVSVVGKACWGKWKTMSAAEKAPFE 94
Query: 107 SKAEKLKSEYGKKMNAYNKKQ 127
++A K K++Y K M AYNKKQ
Sbjct: 95 ARAAKRKADYNKVMVAYNKKQ 115
>gi|302790391|ref|XP_002976963.1| hypothetical protein SELMODRAFT_175895 [Selaginella moellendorffii]
gi|300155441|gb|EFJ22073.1| hypothetical protein SELMODRAFT_175895 [Selaginella moellendorffii]
Length = 156
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 62/85 (72%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PKRP +AFFVFLEE+RKTFK ++PN+ V+AVGKA G WK ++ EK PY KA
Sbjct: 51 DPNQPKRPATAFFVFLEEYRKTFKDKHPNIKGVAAVGKAGGDAWKRLTEEEKKPYHDKAA 110
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDK 135
+ K++Y K + Y KKQ+ D ++K
Sbjct: 111 QKKADYEKTLTEYKKKQEEDAKNEK 135
>gi|351722065|ref|NP_001236719.1| uncharacterized protein LOC100306558 [Glycine max]
gi|255628875|gb|ACU14782.1| unknown [Glycine max]
Length = 209
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 70/107 (65%), Gaps = 1/107 (0%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPP+AFFVFL++FRK+FK+ NP+ V VGK AG KW+SM+ EK PY K
Sbjct: 99 DPNMPKRPPTAFFVFLDDFRKSFKEANPDSKDVKRVGKEAGEKWRSMTDEEKKPYLDKVA 158
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDKSKSEVNDEDEASGEEEHQLEPE 157
+LK EY K M +Y QD +E S E +D++ A+ E ++E E
Sbjct: 159 ELKEEYEKAMESYEAGQD-EEDQTVSDKETSDKEAAAKEVAIEVEEE 204
>gi|357508231|ref|XP_003624404.1| High mobility group protein [Medicago truncatula]
gi|355499419|gb|AES80622.1| High mobility group protein [Medicago truncatula]
Length = 144
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KKAK DP+KPKRP S FF+F+ +FR F+KENP+ VS VGKAAG KW+SMS +KAPY
Sbjct: 4 KKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSD-DKAPY 62
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
+ AEK K EY K ++AYNKK
Sbjct: 63 VADAEKKKMEYVKAIHAYNKK 83
>gi|116785888|gb|ABK23898.1| unknown [Picea sitchensis]
Length = 220
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
REKKA+ DPN+PK+P +AFFVF+++FRKT+K+ NP+V + VGK G KWK+MS +K
Sbjct: 98 REKKAR-DPNQPKKPATAFFVFMDDFRKTYKETNPDVKGAAQVGKEGGLKWKAMSDEDKK 156
Query: 104 PYESKAEKLKSEYGKKMNAY 123
PY KA +LK+EY K M+ Y
Sbjct: 157 PYLEKAAELKAEYEKAMSKY 176
>gi|302797885|ref|XP_002980703.1| hypothetical protein SELMODRAFT_38818 [Selaginella moellendorffii]
gi|300151709|gb|EFJ18354.1| hypothetical protein SELMODRAFT_38818 [Selaginella moellendorffii]
Length = 83
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 57/77 (74%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PKRP +AFFVFLEE+RKTFK ++PN+ V+AVGKA G WK ++ EK PY KA
Sbjct: 7 DPNQPKRPATAFFVFLEEYRKTFKDKHPNIKGVAAVGKAGGDAWKRLTEEEKKPYHDKAA 66
Query: 111 KLKSEYGKKMNAYNKKQ 127
+ K++Y K + Y KKQ
Sbjct: 67 QKKADYEKTLTEYKKKQ 83
>gi|359484115|ref|XP_002267697.2| PREDICTED: high mobility group B protein 7-like [Vitis vinifera]
gi|147815109|emb|CAN61363.1| hypothetical protein VITISV_034306 [Vitis vinifera]
gi|297742725|emb|CBI35359.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
++ +R +K K DPN PKRPP+AFF+F+++FRK +K+ NP+ VS V K G KWKSM+
Sbjct: 85 KKSRRLRKVK-DPNMPKRPPTAFFLFMDDFRKEYKESNPDSKNVSVVAKEGGEKWKSMTD 143
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYN 124
EK PY KA +LK+EY K M YN
Sbjct: 144 EEKKPYVDKAAELKAEYDKAMETYN 168
>gi|357136925|ref|XP_003570053.1| PREDICTED: HMG1/2-like protein-like [Brachypodium distachyon]
Length = 144
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 67/100 (67%), Gaps = 9/100 (9%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFFVF+ EFR+ ++ E+PN +V+ V KAAG KW+SMS A+KAPY KA + K +Y
Sbjct: 36 RPPSAFFVFMSEFRQEYQAEHPNNKSVANVSKAAGEKWRSMSDADKAPYVEKAGQKKQDY 95
Query: 117 GKKMNAYNKKQDG---------DEASDKSKSEVNDEDEAS 147
K ++KK+ DE SDKSKSEV+DED S
Sbjct: 96 EKTKATFDKKESTSSKKTKTQDDEGSDKSKSEVDDEDAGS 135
>gi|15237040|ref|NP_195282.1| high mobility group B5 protein [Arabidopsis thaliana]
gi|75219649|sp|O49597.1|HMGB5_ARATH RecName: Full=High mobility group B protein 5; AltName: Full=High
mobility group protein D; Short=AtHMGdelta; Short=HMG
delta; AltName: Full=Nucleosome/chromatin assembly
factor group D 05; Short=Nucleosome/chromatin assembly
factor group D 5
gi|2832363|emb|CAA74404.1| HMG protein [Arabidopsis thaliana]
gi|3367575|emb|CAA20027.1| HMG delta protein [Arabidopsis thaliana]
gi|7270508|emb|CAB80273.1| HMG delta protein [Arabidopsis thaliana]
gi|21553743|gb|AAM62836.1| HMG delta protein [Arabidopsis thaliana]
gi|98961063|gb|ABF59015.1| At4g35570 [Arabidopsis thaliana]
gi|222423786|dbj|BAH19859.1| AT4G35570 [Arabidopsis thaliana]
gi|332661132|gb|AEE86532.1| high mobility group B5 protein [Arabidopsis thaliana]
Length = 125
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 61/90 (67%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D K +G + K KDPN+PK+PPS FFVFL++FRK F NP+ +V VG+AAG KW
Sbjct: 14 DDRLKVRGNKVGKKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRAAGKKW 73
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYN 124
K+M+ E+AP+ +K++ K+EY M YN
Sbjct: 74 KTMTEEERAPFVAKSQSKKTEYAVTMQQYN 103
>gi|125583208|gb|EAZ24139.1| hypothetical protein OsJ_07880 [Oryza sativa Japonica Group]
Length = 170
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 74/112 (66%), Gaps = 12/112 (10%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR+K A KPKRPPSAFFVF+ EFR+ ++ +P+ +V+AV KAAG KW++MS E
Sbjct: 47 GKRKKAAA--SGKPKRPPSAFFVFMSEFRQEYQAAHPDNKSVAAVSKAAGEKWRAMSEQE 104
Query: 102 KAPYESKA-------EKLKSEYGKKMNAYNKK---QDGDEASDKSKSEVNDE 143
KAPY KA EK K+ + KK + +KK D E SDKSKSEV+D+
Sbjct: 105 KAPYVDKAGQKKQDYEKTKANFDKKESTSSKKAKTHDDGEGSDKSKSEVDDD 156
>gi|4468042|emb|CAB37859.1| unnamed protein product [Vicia faba var. minor]
Length = 74
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 57/74 (77%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPNKPKRPPSAFFVF+ +FR+ +KK++PN +V+AVGKA G +WKS+S EKAPY +A
Sbjct: 1 KDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRA 60
Query: 110 EKLKSEYGKKMNAY 123
K K EY + AY
Sbjct: 61 LKKKEEYEITLQAY 74
>gi|356536465|ref|XP_003536758.1| PREDICTED: high mobility group B protein 7-like [Glycine max]
Length = 200
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPP+AFF FL++FRK+FK+ NP+ V VGK AG KW+SM+ EK PY K
Sbjct: 99 DPNMPKRPPTAFFAFLDDFRKSFKEANPDSKDVKRVGKEAGEKWRSMTDEEKKPYLDKVA 158
Query: 111 KLKSEYGKKMNAYNKKQD 128
+LK+EY K M +Y QD
Sbjct: 159 ELKAEYEKAMESYEAGQD 176
>gi|115447831|ref|NP_001047695.1| Os02g0670400 [Oryza sativa Japonica Group]
gi|50251344|dbj|BAD28320.1| putative high mobility group protein [Oryza sativa Japonica Group]
gi|50252158|dbj|BAD28154.1| putative high mobility group protein [Oryza sativa Japonica Group]
gi|113537226|dbj|BAF09609.1| Os02g0670400 [Oryza sativa Japonica Group]
Length = 145
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 74/112 (66%), Gaps = 12/112 (10%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR+K A KPKRPPSAFFVF+ EFR+ ++ +P+ +V+AV KAAG KW++MS E
Sbjct: 22 GKRKKAAA--SGKPKRPPSAFFVFMSEFRQEYQAAHPDNKSVAAVSKAAGEKWRAMSEQE 79
Query: 102 KAPYESKA-------EKLKSEYGKKMNAYNKK---QDGDEASDKSKSEVNDE 143
KAPY KA EK K+ + KK + +KK D E SDKSKSEV+D+
Sbjct: 80 KAPYVDKAGQKKQDYEKTKANFDKKESTSSKKAKTHDDGEGSDKSKSEVDDD 131
>gi|18700443|dbj|BAB85204.1| high mobility group box protein 2 [Oryza sativa Japonica Group]
gi|125540625|gb|EAY87020.1| hypothetical protein OsI_08417 [Oryza sativa Indica Group]
Length = 145
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 73/112 (65%), Gaps = 12/112 (10%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR+K A KPKRPPSAFFVF+ EFR+ ++ +P +V+AV KAAG KW++MS E
Sbjct: 22 GKRKKAAA--SGKPKRPPSAFFVFMSEFRQEYQAAHPGNKSVAAVSKAAGEKWRAMSEQE 79
Query: 102 KAPYESKA-------EKLKSEYGKKMNAYNKK---QDGDEASDKSKSEVNDE 143
KAPY KA EK K+ + KK + +KK D E SDKSKSEV+D+
Sbjct: 80 KAPYVDKAGQKKQDYEKTKANFDKKESTSSKKAKTHDDGEGSDKSKSEVDDD 131
>gi|255566393|ref|XP_002524182.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223536551|gb|EEF38197.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 155
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 60/82 (73%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
+++K KD + PKRP SAFF+F++EFRK FK++ P+ AVSAVGKA G KWKS+S +
Sbjct: 35 SRKKKNVSKDTDAPKRPASAFFIFMDEFRKYFKEKYPDNKAVSAVGKAGGEKWKSLSETD 94
Query: 102 KAPYESKAEKLKSEYGKKMNAY 123
KAPY KA K K+EY K + AY
Sbjct: 95 KAPYLEKALKRKAEYEKVLEAY 116
>gi|388499756|gb|AFK37944.1| unknown [Lotus japonicus]
Length = 197
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Query: 47 KAKK--DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
KAKK DPN+PKRPP+AFFVFL++FRK FK+ NP V VGK G KW++M+ EK P
Sbjct: 92 KAKKVEDPNQPKRPPTAFFVFLDDFRKEFKEANPGSKDVKRVGKEGGEKWRAMTDEEKKP 151
Query: 105 YESKAEKLKSEYGKKMNAYN 124
Y K +LK EY K M YN
Sbjct: 152 YLEKVAELKEEYEKAMANYN 171
>gi|449464956|ref|XP_004150195.1| PREDICTED: high mobility group B protein 7-like [Cucumis sativus]
gi|449531370|ref|XP_004172659.1| PREDICTED: high mobility group B protein 7-like [Cucumis sativus]
Length = 207
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 40 RQGKREKKAKKD--PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
++ + EKK KKD PN PKRPP+AFF+F+++FRK++K+ NP+ V V K G KWKSM
Sbjct: 94 KKSRTEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSM 153
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYN 124
+ EK PY+ KA +LK+EY K + + N
Sbjct: 154 TDEEKKPYQDKAAELKAEYEKALESRN 180
>gi|168050181|ref|XP_001777538.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671023|gb|EDQ57581.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 314
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYES 107
A KD + PKRPPSA+F+F+E FRK FK NP+V V+A KA G KW SMS EKAPY +
Sbjct: 186 AAKDSDMPKRPPSAYFIFMETFRKEFKAANPDVKGVTASAKAGGEKWLSMSEEEKAPYVA 245
Query: 108 KAEKLKSEYGKKMNAY 123
+A K +Y + M AY
Sbjct: 246 EASVRKGQYEQAMTAY 261
>gi|157382896|gb|ABV48883.1| high mobility group protein B1 [Physcomitrella patens]
Length = 215
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYES 107
A KD + PKRPPSA+F+F+E FRK FK NP+V V+A KA G KW SMS EKAPY +
Sbjct: 130 AAKDSDMPKRPPSAYFIFMETFRKEFKAANPDVKGVTASAKAGGEKWLSMSEEEKAPYVA 189
Query: 108 KAEKLKSEYGKKMNAY 123
+A K +Y + M AY
Sbjct: 190 EASVRKGQYEQAMTAY 205
>gi|388511193|gb|AFK43658.1| unknown [Lotus japonicus]
Length = 92
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 58/82 (70%), Gaps = 6/82 (7%)
Query: 66 LEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYN- 124
+ EFR FKK+NPN +V+AVGKAAG KWKSM+ AEKAPY ++AEK K EY K + AYN
Sbjct: 1 MSEFRTQFKKDNPNNKSVAAVGKAAGSKWKSMTDAEKAPYVARAEKAKEEYEKTLRAYNN 60
Query: 125 -----KKQDGDEASDKSKSEVN 141
K +E SDKSKSEVN
Sbjct: 61 GLAESKGSAEEEGSDKSKSEVN 82
>gi|195619220|gb|ACG31440.1| HMG1/2-like protein [Zea mays]
Length = 139
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 66/103 (64%), Gaps = 6/103 (5%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
KPKRPPSAFFVF+ EFR+ ++ +P +V+ V KAAG KW++MS EK PY +A + K
Sbjct: 32 KPKRPPSAFFVFMSEFRQQYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQKK 91
Query: 114 SEYGKKMNAYNKKQDGD------EASDKSKSEVNDEDEASGEE 150
+Y K ++KK+ E D SKSEV+DED +S EE
Sbjct: 92 QDYEKTKANFDKKESTSSKKAKTEDEDGSKSEVDDEDGSSDEE 134
>gi|225463454|ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 [Vitis vinifera]
gi|297740668|emb|CBI30850.3| unnamed protein product [Vitis vinifera]
Length = 175
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 36 SGSKRQGKREKKAKK-DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
SG+K + K +K++++ D KPK+PP+AFF FLE+FRK F+++NP+V ++ +GKA G KW
Sbjct: 68 SGNKAKAKTKKRSQRVDSKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKW 127
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDE 131
K+M+ EK Y A + ++E+ + M Y K+Q+ E
Sbjct: 128 KTMTYEEKVQYYDIATEKRAEFDRAMADYIKRQESGE 164
>gi|1845195|emb|CAA69605.1| HMGc1 [Zea mays]
gi|5441504|emb|CAB46753.1| HMGc1 protein [Zea mays]
gi|194690322|gb|ACF79245.1| unknown [Zea mays]
gi|194704052|gb|ACF86110.1| unknown [Zea mays]
gi|219885481|gb|ACL53115.1| unknown [Zea mays]
gi|413938184|gb|AFW72735.1| HMG-like nucleosome/chromatin assembly factor D isoform 1 [Zea
mays]
gi|413938185|gb|AFW72736.1| HMG-like nucleosome/chromatin assembly factor D isoform 2 [Zea
mays]
Length = 139
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 66/103 (64%), Gaps = 6/103 (5%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
KPKRPPSAFFVF+ EFR+ ++ +P +V+ V KAAG KW++MS EK PY +A + K
Sbjct: 32 KPKRPPSAFFVFMSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQKK 91
Query: 114 SEYGKKMNAYNKKQDGD------EASDKSKSEVNDEDEASGEE 150
+Y K ++KK+ E D SKSEV+DED +S EE
Sbjct: 92 QDYEKTKANFDKKESTSSKKAKTEDEDGSKSEVDDEDGSSDEE 134
>gi|255557355|ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223541125|gb|EEF42681.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 198
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Query: 39 KRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
KR KR+ AK D KPK+PP+AFF FLE+FRK F+K+NP+V ++ +GKA G KWK M+
Sbjct: 95 KRISKRQI-AKLDSKKPKKPPTAFFYFLEDFRKDFQKQNPDVKSMREIGKACGEKWKMMT 153
Query: 99 PAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDE 131
EK Y A + ++E+ K M Y KK++ E
Sbjct: 154 YEEKVKYYDIATEKRAEFDKAMAEYIKKKESGE 186
>gi|388495062|gb|AFK35597.1| unknown [Lotus japonicus]
Length = 162
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 59/88 (67%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K + D NKPK+PP+AFF FLE+FRK F+ +NP+V + +GK+ G KWK+M+ EK Y
Sbjct: 62 KQRIDANKPKKPPTAFFYFLEDFRKEFQVQNPDVKTMRDIGKSCGEKWKTMTYEEKVQYY 121
Query: 107 SKAEKLKSEYGKKMNAYNKKQDGDEASD 134
A + ++E+ + M YNKK + +++
Sbjct: 122 DIATEKRAEFDRAMTEYNKKMVSNLSNN 149
>gi|413935044|gb|AFW69595.1| high mobility group protein1 [Zea mays]
Length = 97
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 63/98 (64%), Gaps = 14/98 (14%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKGAK KGAA+ D K+ + K G R+ KA KDPNKPKR PS
Sbjct: 1 MKGAKSKGAAKA--------DAKLAVKSKGAEKPAKG------RKGKAGKDPNKPKRAPS 46
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
AFFVF+EEFRK FK++NP +V+AVGKAAG +WKS+S
Sbjct: 47 AFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLS 84
>gi|162461550|ref|NP_001105075.1| high mobility group box protein2 [Zea mays]
gi|17017394|gb|AAL33651.1|AF440222_1 HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length = 139
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 65/103 (63%), Gaps = 6/103 (5%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
KPKRPPSAFF F+ EFR+ ++ +P +V+ V KAAG KW++MS EK PY +A + K
Sbjct: 32 KPKRPPSAFFAFMSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQKK 91
Query: 114 SEYGKKMNAYNKKQDGD------EASDKSKSEVNDEDEASGEE 150
+Y K ++KK+ E D SKSEV+DED +S EE
Sbjct: 92 QDYEKTKANFDKKESTSSKKAKTEDEDGSKSEVDDEDGSSDEE 134
>gi|339716048|gb|AEJ88271.1| putative HMG DNA-binding protein [Wolffia arrhiza]
Length = 148
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 72/97 (74%), Gaps = 6/97 (6%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKR PSAFFVFLEEFRK +K+++P+ +V+AVGKAAG KW+SMS ++KAPY +K+
Sbjct: 37 DPNKPKRAPSAFFVFLEEFRKEYKEKHPDNKSVAAVGKAAGAKWRSMSDSDKAPYVNKSN 96
Query: 111 KLKSEYGKKMNAYNKKQD------GDEASDKSKSEVN 141
K K+E K KKQ+ D+ SDKSKSEVN
Sbjct: 97 KRKAEVQKTAAVNAKKQETSSRAAADDDSDKSKSEVN 133
>gi|449433698|ref|XP_004134634.1| PREDICTED: high mobility group B protein 14-like [Cucumis sativus]
gi|449505924|ref|XP_004162605.1| PREDICTED: high mobility group B protein 14-like [Cucumis sativus]
Length = 161
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 55/81 (67%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
K D NKPK+PP+AFF FL++FRK F+++NP+V + VGKA G KWK+M+ EK Y
Sbjct: 67 KFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTMTYEEKVQYYDI 126
Query: 109 AEKLKSEYGKKMNAYNKKQDG 129
A + ++E+ K M Y K+ +
Sbjct: 127 ATEKRAEFDKAMTEYKKRMES 147
>gi|356524949|ref|XP_003531090.1| PREDICTED: high mobility group B protein 14-like [Glycine max]
Length = 148
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
D KPK+PP+AFF FLE+FRK F+++NP+V ++ +GKA G KWK+M+ EK Y A
Sbjct: 56 DAMKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIAT 115
Query: 111 KLKSEYGKKMNAYNKKQDG---DEASDKS 136
K + E+ M +NKK + DE D+S
Sbjct: 116 KKREEFDNAMAEFNKKMENGEFDETDDES 144
>gi|351724833|ref|NP_001237839.1| uncharacterized protein LOC100305607 [Glycine max]
gi|255626057|gb|ACU13373.1| unknown [Glycine max]
Length = 150
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
D KP++PP+AFF FLE+FRK F+++NP+V ++ +GKA G KWK+M+ EK Y A
Sbjct: 58 DAMKPRKPPTAFFYFLEDFRKEFQEQNPDVRSMRDIGKACGEKWKTMTYEEKVQYYDIAT 117
Query: 111 KLKSEYGKKMNAYNKKQDG---DEASDKS 136
K + E+ M +NKK + DE D+S
Sbjct: 118 KKREEFDSAMAEFNKKMENGEFDETDDES 146
>gi|226503761|ref|NP_001151622.1| HMG1/2-like protein [Zea mays]
gi|195648164|gb|ACG43550.1| HMG1/2-like protein [Zea mays]
gi|414881086|tpg|DAA58217.1| TPA: HMG1/2-like protein [Zea mays]
Length = 115
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 64/101 (63%)
Query: 29 AATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGK 88
A A S +KR+ + + K DP PK+PP+AFF F+E+FRK +K+E P+V ++ +GK
Sbjct: 15 VAMAPRPSSTKRKPRPKPAGKGDPRAPKKPPTAFFYFMEDFRKIYKQEKPSVKSMQEIGK 74
Query: 89 AAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDG 129
A G KW +M+ EK Y A + ++E+ K M YNKK++
Sbjct: 75 ACGEKWNTMTFEEKVKYYDIATEKRAEFEKAMIEYNKKKES 115
>gi|388501678|gb|AFK38905.1| unknown [Medicago truncatula]
Length = 152
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 55/83 (66%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K K D KPK+PP+AFF FLE+FRK FK +NP+V ++ +GKA G KWK+M+ EK Y
Sbjct: 56 KQKIDAKKPKKPPTAFFYFLEDFRKEFKDQNPDVKSMRDIGKACGEKWKTMTFEEKVQYY 115
Query: 107 SKAEKLKSEYGKKMNAYNKKQDG 129
A + ++E+ + YNKK +
Sbjct: 116 DIATEKRAEFDRATTEYNKKMES 138
>gi|357135842|ref|XP_003569517.1| PREDICTED: high mobility group B protein 14-like [Brachypodium
distachyon]
Length = 127
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 61/96 (63%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R+K DP +PK+PP+AFF F+E+FR FK ENP+V ++ +G+A G KW M+ EK
Sbjct: 32 RKKGTVGDPRRPKKPPTAFFYFMEDFRDKFKAENPSVKSMQDIGRACGEKWNKMAFEEKV 91
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQDGDEASDKSKSE 139
Y A + ++E+ K M YNKK+ E S++S E
Sbjct: 92 KYYDLATERRAEFEKAMAQYNKKKISGELSEESDYE 127
>gi|297597325|ref|NP_001043799.2| Os01g0666200 [Oryza sativa Japonica Group]
gi|56202161|dbj|BAD73639.1| HMG protein-like [Oryza sativa Japonica Group]
gi|125527174|gb|EAY75288.1| hypothetical protein OsI_03176 [Oryza sativa Indica Group]
gi|215693961|dbj|BAG89148.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673529|dbj|BAF05713.2| Os01g0666200 [Oryza sativa Japonica Group]
Length = 133
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 61/86 (70%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
D +PK+PP+AFF F+E+FRKT+K+ENP+V ++ VGKA G KW +M+ E+ Y A
Sbjct: 45 DRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWNTMTFEERVKYYDIAT 104
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDKS 136
+ ++EY K + ++KK++ E S++S
Sbjct: 105 EKRAEYEKAVAEFDKKKESGELSEES 130
>gi|125527178|gb|EAY75292.1| hypothetical protein OsI_03182 [Oryza sativa Indica Group]
Length = 133
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 61/86 (70%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
D +PK+PP+AFF F+E+FRKT+K+ENP+V ++ VGKA G KW +M+ E+ Y A
Sbjct: 45 DRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWNTMTFEERVKYYDIAT 104
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDKS 136
+ ++EY K + ++KK++ E S++S
Sbjct: 105 EKRAEYEKPVAEFDKKKESGELSEES 130
>gi|357484153|ref|XP_003612363.1| HMG1/2-like protein [Medicago truncatula]
gi|355513698|gb|AES95321.1| HMG1/2-like protein [Medicago truncatula]
Length = 94
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 59/95 (62%), Gaps = 10/95 (10%)
Query: 18 KPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKEN 77
KP D ++ ++ A T G ++ K KDPNKPKRPPSAFFVF+ EFR+ FKKEN
Sbjct: 9 KPADNRLKRKGAGT----------GTKQSKKAKDPNKPKRPPSAFFVFMSEFRERFKKEN 58
Query: 78 PNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
P+ +V+ VGKA G +WK++S A + KL
Sbjct: 59 PSNKSVAVVGKAGGKEWKALSDAVRILLLFHRRKL 93
>gi|162460809|ref|NP_001105483.1| high mobility group protein3 [Zea mays]
gi|1845197|emb|CAA69606.1| HMGc2 [Zea mays]
gi|223947405|gb|ACN27786.1| unknown [Zea mays]
gi|413923414|gb|AFW63346.1| HMGc2 protein [Zea mays]
Length = 138
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
KPKRPPSAFFVF+ EFR+ ++ ++P +V+AV KAAG KW+SMS EK PY +A
Sbjct: 33 KPKRPPSAFFVFMSEFRQEYQAQHPGNKSVAAVSKAAGEKWRSMSEQEKQPYVDQA---- 88
Query: 114 SEYGKKMNAYNKKQDGDEASDKSKSEVNDEDEASGEEEHQLEPEPEPEQDEDE 166
G+K Y K + E S SK D+D+ S E + + + D+DE
Sbjct: 89 ---GQKKQDYEKTKANIEKSTSSKKAKTDDDDGSKSEVDDEDGGSDEDNDDDE 138
>gi|51858856|gb|AAH81424.1| Hmgb3b protein [Danio rerio]
Length = 166
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GK+ +K KKDPN P+RPPS FF+F E R K +NP++ + V K GG W ++S +E
Sbjct: 81 GKKGRKQKKDPNAPRRPPSGFFLFCAEQRPIIKAQNPSL-GIGDVAKKLGGMWNNLSDSE 139
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKKQ 127
K P+ S A+KLK +Y K M Y KK+
Sbjct: 140 KQPFLSNADKLKDKYQKDMAFYKKKK 165
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
AK DP KPK SA+ F++ R+ K+NP VT S K +WK+MSP EK +E
Sbjct: 2 AKGDPGKPKGKMSAYAYFVKTCREEHNKKNPGVTVNFSEFSKKCSERWKTMSPKEKTKFE 61
Query: 107 SKAEKLKSEYGKKMNAYN 124
A++ K+ Y ++M YN
Sbjct: 62 DLAKQDKARYDQEMMHYN 79
>gi|242053921|ref|XP_002456106.1| hypothetical protein SORBIDRAFT_03g030540 [Sorghum bicolor]
gi|241928081|gb|EES01226.1| hypothetical protein SORBIDRAFT_03g030540 [Sorghum bicolor]
Length = 109
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 64/101 (63%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
S KR+ + + K D PK+PP+AFF F+E+FRK +K+E P+V ++ +GKA G KW
Sbjct: 6 SSPKRKSRPKPAGKGDRRAPKKPPTAFFYFMEDFRKVYKQEKPSVKSMQEIGKACGEKWN 65
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKS 136
+M+ EK Y A + ++E+ K M YNKK+ E S++S
Sbjct: 66 TMAFEEKVKYYDIATEKRAEFEKAMIEYNKKKKNGEMSEES 106
>gi|224097317|ref|XP_002310906.1| high mobility group family [Populus trichocarpa]
gi|118483462|gb|ABK93630.1| unknown [Populus trichocarpa]
gi|222853809|gb|EEE91356.1| high mobility group family [Populus trichocarpa]
Length = 201
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
+DPN PKRPP+AFF+F+++FRK +K+ NP+ V V K G +WKSM+ EK Y KA
Sbjct: 100 RDPNAPKRPPTAFFLFMDDFRKEYKEANPDSKDVKKVAKEGGVRWKSMTDEEKKQYVDKA 159
Query: 110 EKLKSEYGKKMNAYNKKQDGDEASDKSKSEVNDEDEASGEEE 151
+LK+E K + + N + + DE S+ EV D + EEE
Sbjct: 160 AELKAENDKALESDNAENEDDEGV-SSEKEVADLELRDKEEE 200
>gi|62955511|ref|NP_001017769.1| high mobility group protein B3 [Danio rerio]
gi|62202670|gb|AAH93186.1| High-mobility group box 3b [Danio rerio]
gi|182890656|gb|AAI64996.1| Hmgb3b protein [Danio rerio]
Length = 198
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GK+ +K KKDPN P+RPPS FF+F E R K +NP++ + V K GG W ++S +E
Sbjct: 81 GKKGRKQKKDPNAPRRPPSGFFLFCAEQRPIIKAQNPSL-GIGDVAKKLGGMWNNLSDSE 139
Query: 102 KAPYESKAEKLKSEYGKKMNAY 123
K P+ S A+KLK +Y K M Y
Sbjct: 140 KQPFLSNADKLKDKYQKDMAFY 161
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
AK DP KPK SA+ F++ R+ K+NP VT S K +WK+MSP EK +E
Sbjct: 2 AKGDPGKPKGKMSAYAYFVKTCREEHNKKNPGVTVNFSEFSKKCSERWKTMSPKEKTKFE 61
Query: 107 SKAEKLKSEYGKKMNAYNKKQDG 129
A++ K+ Y ++M YN + G
Sbjct: 62 DLAKQDKARYDQEMMHYNPGKKG 84
>gi|327296079|ref|XP_003232734.1| non-histone chromosomal protein 6 [Trichophyton rubrum CBS 118892]
gi|326465045|gb|EGD90498.1| non-histone chromosomal protein 6 [Trichophyton rubrum CBS 118892]
Length = 102
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKR SA+ +F E R ++ENPN+T VGK G +WK++S ++ PYE
Sbjct: 17 KKKKDPNAPKRGLSAYMIFANEQRAAVREENPNIT-FGQVGKVLGERWKALSDKQRVPYE 75
Query: 107 SKAEKLKSEYGKKMNAYNKKQDGDEAS 133
KA K Y + AYN +QD DE+S
Sbjct: 76 EKAATDKQRYEDEKAAYNSRQDDDESS 102
>gi|348543650|ref|XP_003459296.1| PREDICTED: high mobility group protein B2-like isoform 1
[Oreochromis niloticus]
Length = 200
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 10/116 (8%)
Query: 16 ALKPNDRKVGKRKAATAKLDSGSKRQ--------GKREKKAKKDPNKPKRPPSAFFVFLE 67
AL P+D+K + A K+ + + GKR +K +KDPN PKRPPSAFFVF
Sbjct: 51 ALSPSDKKCFEDMAKADKVRYNREMKDYVPPKGFGKRGRK-RKDPNAPKRPPSAFFVFCS 109
Query: 68 EFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
E+R + K++ P ++ + K G W +S +EK PYE KA+KL+ +Y + M AY
Sbjct: 110 EYRPSVKQQYPGLS-IGDCAKKLGEMWSKLSQSEKQPYEEKAQKLREKYDRDMVAY 164
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
+KD NKPK SA+ F++ R+ +K+NP + A K +WK++SP++K +E
Sbjct: 3 RKDINKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSPSDKKCFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 MAKADKVRYNREMKDY 78
>gi|194700664|gb|ACF84416.1| unknown [Zea mays]
gi|194701704|gb|ACF84936.1| unknown [Zea mays]
gi|413923412|gb|AFW63344.1| hypothetical protein ZEAMMB73_127996 [Zea mays]
gi|413923413|gb|AFW63345.1| hypothetical protein ZEAMMB73_127996 [Zea mays]
Length = 139
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
KPKRPPSAFFVF+ EFR+ ++ ++P +V+AV KAAG KW+SMS EK PY +A + K
Sbjct: 33 KPKRPPSAFFVFMSEFRQEYQAQHPGNKSVAAVSKAAGEKWRSMSEQEKQPYVDQAGQKK 92
Query: 114 SEY 116
+Y
Sbjct: 93 QDY 95
>gi|432953329|ref|XP_004085352.1| PREDICTED: high mobility group protein B2-like isoform 1 [Oryzias
latipes]
Length = 200
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 67/116 (57%), Gaps = 10/116 (8%)
Query: 16 ALKPNDRKVGKRKAATAKLDSGS--------KRQGKREKKAKKDPNKPKRPPSAFFVFLE 67
AL P+D+K + A K+ K GKR +K +KDPN PKRPPSAFFVF
Sbjct: 51 ALSPSDKKCFEDMAKADKVRYNREMCDYVPPKGFGKRGRK-RKDPNAPKRPPSAFFVFCS 109
Query: 68 EFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
E+R + K++ P ++ + K G W +S +EK PYE KA+KL+ +Y + M AY
Sbjct: 110 EYRPSVKQQYPGLS-IGDCAKKLGEMWSKLSQSEKQPYEEKAQKLREKYDRDMVAY 164
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
+KD NKPK SA+ F++ R+ +K+NP + A K +WK++SP++K +E
Sbjct: 3 RKDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSPSDKKCFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 MAKADKVRYNREMCDY 78
>gi|410917315|ref|XP_003972132.1| PREDICTED: high mobility group protein B2-like [Takifugu rubripes]
Length = 214
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K +K KKDPN PKRPPSAFFVF + R K++NP ++ + + K G W + P +K
Sbjct: 83 KVSRKKKKDPNAPKRPPSAFFVFCSDHRPKIKEDNPGIS-IGDIAKKLGELWSTQGPKDK 141
Query: 103 APYESKAEKLKSEYGKKMNAYNKK 126
APYE++A KLK +Y K + AY K
Sbjct: 142 APYEARAAKLKEKYEKDVAAYKAK 165
>gi|225709792|gb|ACO10742.1| High mobility group protein B2 [Caligus rogercresseyi]
Length = 215
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
GSK GKR KKDPN PKRPPSAFFVF E R K +NP + + + K G W
Sbjct: 83 GSKAAGKR----KKDPNAPKRPPSAFFVFCAEHRGRIKADNPGM-GIGDIAKQLGLLWGK 137
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKS 136
+P +K P+E+KA KLK +Y K + AY K + G A+ KS
Sbjct: 138 QTPKDKLPHEAKATKLKEKYEKDVAAY-KAKGGAGATAKS 176
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDPNKPK S++ F+ R+ KK++P + S K +W++MS EK +E
Sbjct: 4 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDM 63
Query: 109 AEKLKSEYGKKMNAYNKKQDGDEASDKSKSEVN 141
A+ K Y K M Y + G +A+ K K + N
Sbjct: 64 AKGDKVRYDKDMKGYVPPK-GSKAAGKRKKDPN 95
>gi|221219844|gb|ACM08583.1| High mobility group protein B2 [Salmo salar]
Length = 211
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKRPPSAFFVF EFR T K+E P + + K G W +P +K P+E K
Sbjct: 91 KKDPNAPKRPPSAFFVFSAEFRPTVKQEFPGCS-IGQCAKKLGIMWGQQTPTQKQPFEEK 149
Query: 109 AEKLKSEYGKKMNAY 123
A +L+ +Y K M AY
Sbjct: 150 ALRLREKYDKDMAAY 164
>gi|213514690|ref|NP_001133170.1| high-mobility group box 2 [Salmo salar]
gi|197632301|gb|ACH70874.1| high-mobility group box 2 [Salmo salar]
gi|221219834|gb|ACM08578.1| High mobility group protein B2 [Salmo salar]
gi|221220870|gb|ACM09096.1| High mobility group protein B2 [Salmo salar]
gi|223646276|gb|ACN09896.1| High mobility group protein B2 [Salmo salar]
gi|223646962|gb|ACN10239.1| High mobility group protein B2 [Salmo salar]
gi|223672123|gb|ACN12243.1| High mobility group protein B2 [Salmo salar]
gi|223672825|gb|ACN12594.1| High mobility group protein B2 [Salmo salar]
Length = 214
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
GSK GKR KKDPN PKRPPSAFFVF E R K +NP + + + K G W
Sbjct: 83 GSKAAGKR----KKDPNAPKRPPSAFFVFCAEHRGRIKADNPGM-GIGDIAKQLGLLWGK 137
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKS 136
+P +K P+E+KA KLK +Y K + AY K + G A+ KS
Sbjct: 138 QTPKDKLPHEAKAAKLKEKYEKDVAAY-KAKGGAGATAKS 176
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDPNKPK S++ F+ R+ KK++P + S K +W++MS EK +E
Sbjct: 4 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDM 63
Query: 109 AEKLKSEYGKKMNAYNKKQDGDEASDKSKSEVN 141
A+ K Y K M Y + G +A+ K K + N
Sbjct: 64 AKGDKVRYDKDMKGYVPPK-GSKAAGKRKKDPN 95
>gi|71027705|ref|XP_763496.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350449|gb|EAN31213.1| high mobility group protein, putative [Theileria parva]
Length = 94
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKS 96
SK GK+ K+AKKDPN PKR S++ F +E R +ENP++ V+AVGK G W S
Sbjct: 6 SKSAGKKSKRAKKDPNAPKRALSSYMFFAKEKRAELVRENPDLARDVAAVGKLVGAAWNS 65
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+ +EKAPYE AE ++ Y K+ AYNK
Sbjct: 66 LDESEKAPYEKLAEADRARYEKEKAAYNK 94
>gi|326525246|dbj|BAK07893.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
K KRPP+AFF+F+++FR FK +P+ V+AVGKAAG KW+SM+ EK PY +A++LK
Sbjct: 100 KAKRPPTAFFLFMKDFRVEFKTSHPDEKGVAAVGKAAGEKWRSMTEEEKKPYNDQAKELK 159
Query: 114 SEYGKKMNAYNKKQDGDEASDKSKSEVNDED 144
++ + +E +D EV+D D
Sbjct: 160 AQLDNGEGSAENNVGDEEKADADAEEVDDAD 190
>gi|432951224|ref|XP_004084757.1| PREDICTED: high mobility group protein B2-like [Oryzias latipes]
Length = 221
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFFVF + R K++NP ++ + + K G W + S +KAPYE+KA
Sbjct: 114 DPNAPKRPPSAFFVFCSDHRPKIKEDNPGIS-IGDIAKKLGELWATQSAKDKAPYEAKAA 172
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDKSKSEVNDEDEASGEEE 151
KLK +Y K + AY K ++ + EV D SG +E
Sbjct: 173 KLKEKYEKDVAAYRAKGGSGKSDELKLQEVEDIVLNSGGQE 213
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESK 108
KDPNKP+ SA+ F+ R+ KK++P + A K +WK+MS EK ++
Sbjct: 26 KDPNKPRGKTSAYAYFVATCREEHKKKHPGTSVNFAEFSKKCSERWKTMSSKEKVKFDEL 85
Query: 109 AEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 86 AKTDKARYDREMKTY 100
>gi|410932269|ref|XP_003979516.1| PREDICTED: high mobility group-T protein-like [Takifugu rubripes]
gi|410933007|ref|XP_003979884.1| PREDICTED: high mobility group-T protein-like [Takifugu rubripes]
Length = 209
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F EFR K E+P +T + V K G W + + +K PYE KA
Sbjct: 95 DPNAPKRPPSAFFIFCSEFRPKVKGEHPGLT-IGEVAKKLGELWNNTNSEDKQPYEKKAS 153
Query: 111 KLKSEYGKKMNAYNKKQDGDEAS 133
KLK +Y K + AY +K G S
Sbjct: 154 KLKEKYEKDVAAYRQKTKGGSGS 176
>gi|609553|gb|AAA74556.1| HMG-T2 [Oncorhynchus mykiss]
Length = 215
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
GSK GKR KKDPN PKRPPSAFFVF E R K +NP + + + K G W
Sbjct: 83 GSKAAGKR----KKDPNAPKRPPSAFFVFCAEHRGRIKADNPGM-GIGDIAKQLGLLWGK 137
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKS 136
+P +K P+E+KA KLK +Y K + AY K + G A+ KS
Sbjct: 138 QTPKDKQPHEAKAAKLKEKYEKDVAAY-KAKGGAGATAKS 176
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDPNKPK S++ F+ R+ KK++P + S K +W++MS EK +E
Sbjct: 4 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDM 63
Query: 109 AEKLKSEYGKKMNAYNKKQDGDEASDKSKSEVN 141
A+ K Y K M Y + G +A+ K K + N
Sbjct: 64 AKGDKVRYDKDMKGYVPPK-GSKAAGKRKKDPN 95
>gi|221221606|gb|ACM09464.1| High mobility group protein B2 [Salmo salar]
gi|223646184|gb|ACN09850.1| High mobility group protein B2 [Salmo salar]
gi|223646756|gb|ACN10136.1| High mobility group protein B2 [Salmo salar]
gi|223672031|gb|ACN12197.1| High mobility group protein B2 [Salmo salar]
gi|223672611|gb|ACN12487.1| High mobility group protein B2 [Salmo salar]
Length = 214
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
GSK GKR KKDPN PKRPPSAFFVF E R K +NP + + + K G W
Sbjct: 83 GSKAAGKR----KKDPNAPKRPPSAFFVFCAEHRGRIKADNPGM-GIGDIAKQLGLLWGK 137
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKS 136
+P +K P+E+KA KLK +Y K + AY K + G A+ KS
Sbjct: 138 QTPKDKQPHEAKAAKLKEKYEKDVAAY-KAKGGAGATAKS 176
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDPNKPK S++ F+ R+ KK++P + S K +W++MS EK +E
Sbjct: 4 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDM 63
Query: 109 AEKLKSEYGKKMNAYNKKQDGDEASDKSKSEVN 141
A+ K Y K M Y + G +A+ K K + N
Sbjct: 64 AKGDKVRYDKDMKGYVPPK-GSKAAGKRKKDPN 95
>gi|125559825|gb|EAZ05273.1| hypothetical protein OsI_27476 [Oryza sativa Indica Group]
gi|125559834|gb|EAZ05282.1| hypothetical protein OsI_27485 [Oryza sativa Indica Group]
Length = 204
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
K KRPP+AFF+F+ +FRK +K E+P+ +VSAV K G +WKSMS +K PY KA +LK
Sbjct: 91 KGKRPPTAFFLFMSDFRKEYKAEHPDNKSVSAVAKEGGERWKSMSDEDKKPYLDKAAELK 150
Query: 114 SEY 116
+EY
Sbjct: 151 AEY 153
>gi|357144307|ref|XP_003573245.1| PREDICTED: high mobility group B protein 7-like [Brachypodium
distachyon]
Length = 218
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N KRPP+AFF+F+++FR FK +P+ VSAVGKAAG KWK+M+ EK PY +A++L
Sbjct: 99 NGKKRPPTAFFIFMKDFRLEFKASHPDEKGVSAVGKAAGVKWKAMTDEEKKPYLDQAKEL 158
Query: 113 KSEY 116
K+++
Sbjct: 159 KAKF 162
>gi|229365968|gb|ACQ57964.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 197
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
++KK KDPN PKRPPSAFF+F +FR K E+P +T + K G W S S K
Sbjct: 83 QKKKRFKDPNAPKRPPSAFFLFCGDFRPKVKSEHPGLT-IGDTAKKLGEMWNSSSAENKQ 141
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
PYE KA KLK +Y K + AY K D AS
Sbjct: 142 PYERKAAKLKEKYDKDIVAYRTKGTVDSAS 171
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESK 108
KDP KPK S++ F++ R+ KK++P + A K +WK+MS EK +E
Sbjct: 3 KDPRKPKGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSQKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAYN 124
A+ K Y + M Y+
Sbjct: 63 AKLDKVRYERDMKNYD 78
>gi|115474323|ref|NP_001060758.1| Os08g0101100 [Oryza sativa Japonica Group]
gi|38637289|dbj|BAD03552.1| putative HMG type nucleosome/chromatin assembly factor D [Oryza
sativa Japonica Group]
gi|113622727|dbj|BAF22672.1| Os08g0101100 [Oryza sativa Japonica Group]
gi|125601889|gb|EAZ41214.1| hypothetical protein OsJ_25719 [Oryza sativa Japonica Group]
gi|213959174|gb|ACJ54921.1| HMG type nucleosome/chromatin assembly factor [Oryza sativa
Japonica Group]
gi|215697671|dbj|BAG91665.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
K KRPP+AFF+F+ +FRK +K E+P+ +VSAV K G +WKSMS +K PY KA +LK
Sbjct: 91 KGKRPPTAFFLFMSDFRKEYKAEHPDNKSVSAVAKEGGERWKSMSDEDKKPYLDKAAELK 150
Query: 114 SEY 116
+EY
Sbjct: 151 AEY 153
>gi|297665615|ref|XP_002811141.1| PREDICTED: high mobility group protein B4 [Pongo abelii]
Length = 189
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GK +K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 62 ALAKLDKARYQEEMMNYVGKTKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKSK 137
V KA G W + + EK PYE +A L+++Y +++ Y K++ A K +
Sbjct: 122 Q-VAKATGKMWSAATDLEKHPYEQRAALLRAKYFEELELYRKQRKQCNARKKYR 174
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFEEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|229367676|gb|ACQ58818.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 197
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
++KK KDPN PKRPPSAFF+F +FR K E+P +T + K G W S S K
Sbjct: 83 QKKKRFKDPNAPKRPPSAFFLFCGDFRPKVKSEHPGLT-IGDTAKKLGEMWNSSSAENKQ 141
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
PYE KA KLK +Y K + AY K D AS
Sbjct: 142 PYERKAAKLKEKYDKDIVAYRTKGTVDSAS 171
>gi|326475470|gb|EGD99479.1| nucleosome binding protein [Trichophyton tonsurans CBS 112818]
Length = 102
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKR SA+ +F E R ++ENPN+T VGK G +WK++S ++ PYE
Sbjct: 17 KKKKDPNAPKRGLSAYMIFANEQRAAVREENPNIT-FGQVGKVLGERWKALSDKQRVPYE 75
Query: 107 SKAEKLKSEYGKKMNAYNKKQDGDEAS 133
KA K Y + AYN +QD +E+S
Sbjct: 76 EKAATDKQRYEDEKAAYNSRQDDEESS 102
>gi|225708606|gb|ACO10149.1| High mobility group protein B2 [Osmerus mordax]
Length = 216
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G + K KKDPN PKRPPSAFFVF + R K E+P ++ + + K G W +P
Sbjct: 82 KGTKVGKRKKDPNAPKRPPSAFFVFCSDHRARIKGEHPGIS-IGDIAKKLGELWSKQTPK 140
Query: 101 EKAPYESKAEKLKSEYGKKMNAYNKK 126
+K PYE+KA KLK +Y K + AY K
Sbjct: 141 DKVPYEAKAGKLKEKYEKDVAAYRAK 166
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDPNKP+ S++ F++ R+ KK++P + S K +WK+MS EK +E
Sbjct: 4 KDPNKPRGKTSSYAFFVQTCREEHKKKHPGTSVNFSEFSKKCSERWKTMSAKEKVKFEDL 63
Query: 109 AEKLKSEYGKKMNAY 123
A+ K + ++M Y
Sbjct: 64 AKGDKVRFDREMKGY 78
>gi|255544145|ref|XP_002513135.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223548146|gb|EEF49638.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 196
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 4/87 (4%)
Query: 58 PPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYG 117
PP+AFF+FL+EFRKTFK+ NP+ V V K AG KWK+M+ EK PY KA +LK+EY
Sbjct: 103 PPTAFFIFLDEFRKTFKEANPDSKDVKRVAKEAGEKWKAMTDEEKKPYADKATELKAEYD 162
Query: 118 KKM----NAYNKKQDGDEASDKSKSEV 140
K + NA NK +G D ++ EV
Sbjct: 163 KALGEVNNAENKDDEGGSEKDDAEQEV 189
>gi|82658290|ref|NP_001032501.1| high mobility group protein B2 [Danio rerio]
gi|81294190|gb|AAI07992.1| Zgc:123215 [Danio rerio]
Length = 213
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFFVF + R K +NP ++ + + K G W +SP EK+PYE KA
Sbjct: 91 DPNAPKRPPSAFFVFCSDHRPKVKGDNPGIS-IGDIAKKLGEMWSKLSPKEKSPYEQKAM 149
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + AY K
Sbjct: 150 KLKEKYEKDVAAYRAK 165
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDPNKP+ S++ F++ R+ KK+NP + S K +W++MS EK +E
Sbjct: 3 KDPNKPRGKTSSYAFFVQTCREEHKKKNPGTSVNFSEFSKKCSERWRTMSSKEKGKFEEM 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 AKTDKVRYDREMKNY 77
>gi|148235321|ref|NP_001089163.1| high mobility group box 3 [Xenopus laevis]
gi|55824420|gb|AAV66347.1| high mobility group B3b protein [Xenopus laevis]
gi|114108280|gb|AAI23148.1| LOC734200 protein [Xenopus laevis]
Length = 201
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G ++GKR KDPN PKRPPS FF+F EFR K NP ++ + + K G W
Sbjct: 77 DFGPVKKGKRN----KDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDIAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S EK PY +KA KLK +Y K + Y K D A
Sbjct: 132 NNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGA 169
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYE 106
AK+DP KPK SA+ F++ R+ KK+NP + A K +W+SMS EK+ +E
Sbjct: 2 AKRDPKKPKGKMSAYAYFVQTCREEHKKKNPEIPVNFAEFSKKCSERWRSMSGKEKSKFE 61
Query: 107 SKAEKLKSEYGKKMNAYNKKQDGDEASD 134
A+ K Y ++M + + G D
Sbjct: 62 DLAKADKVRYDREMKDFGPVKKGKRNKD 89
>gi|335892928|gb|AEH59759.1| high mobility group box 1 [Lethenteron camtschaticum]
Length = 208
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G+R + KKDPN PKRPPSAFF++ E+R + ENP +T + ++ K G W +
Sbjct: 82 KGERGSRKKKDPNAPKRPPSAFFIYCAEYRSKVRAENPGLT-IGSIAKKLGEMWNNAPAD 140
Query: 101 EKAPYESKAEKLKSEYGKKMNAYNKK 126
EK+ YE K KLK +Y K M +Y K
Sbjct: 141 EKSIYERKTAKLKEKYDKDMASYRSK 166
>gi|1419611|emb|CAA67363.1| HMG [Lampetra fluviatilis]
Length = 208
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G+R + KKDPN PKRPPSAFF++ E+R + ENP +T + ++ K G W +
Sbjct: 82 KGERGSRKKKDPNAPKRPPSAFFIYCAEYRSKVRAENPGLT-IGSIAKKLGEMWNNAPAD 140
Query: 101 EKAPYESKAEKLKSEYGKKMNAYNKK 126
EK+ YE K KLK +Y K M +Y K
Sbjct: 141 EKSIYERKTAKLKEKYDKDMASYRSK 166
>gi|225195621|gb|ACN82088.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K+E P ++ + V K G W S EK PY
Sbjct: 74 KKRFKDPNAPKRPPSAFFIFCAEFRPKVKEETPGLS-IGDVAKKLGEMWNKTSSEEKQPY 132
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA +LK +Y K + AY K
Sbjct: 133 EKKAARLKEKYEKDITAYRSK 153
>gi|296810682|ref|XP_002845679.1| non-histone chromosomal protein 6 [Arthroderma otae CBS 113480]
gi|238843067|gb|EEQ32729.1| non-histone chromosomal protein 6 [Arthroderma otae CBS 113480]
Length = 103
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
+ K +G+ +K KKDPN PKR SA+ +F E R ++ENPN+T VGK G +WK
Sbjct: 7 TARKAKGRGVEKKKKDPNAPKRGLSAYMIFANEQRAAVREENPNIT-FGQVGKVLGERWK 65
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
++S ++ PYE KA K Y + AYN +Q+ +E+S
Sbjct: 66 ALSDKQRVPYEEKAATDKQRYEDEKAAYNSRQEEEESS 103
>gi|85000895|ref|XP_955166.1| high-mobility-group (HMG) protein [Theileria annulata strain
Ankara]
gi|65303312|emb|CAI75690.1| high-mobility-group (HMG) protein, putative [Theileria annulata]
Length = 94
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKS 96
+K GK+ K+AKKDPN PKR S++ F +E R ++NP++ V+AVGK G W S
Sbjct: 6 AKSAGKKSKRAKKDPNAPKRALSSYMFFAKEKRAELVRDNPDLARDVAAVGKLVGAAWNS 65
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+ +EKAPYE AE ++ Y K+ AYNK
Sbjct: 66 LDESEKAPYEKLAEADRARYEKEKAAYNK 94
>gi|357165293|ref|XP_003580334.1| PREDICTED: HMG1/2-like protein-like [Brachypodium distachyon]
Length = 135
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 73/125 (58%), Gaps = 9/125 (7%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D+ K GKR KKA KPKR P+ FF FL EFR + +++P V+AV KAAG KW
Sbjct: 8 DASFKASGKR-KKATGGVAKPKRAPTPFFAFLAEFRPQYMEKHPEAKGVAAVTKAAGEKW 66
Query: 95 KSMSPAEKAPYESKAEKLK----SEYGKKMNAYNKKQDGD----EASDKSKSEVNDEDEA 146
+SMS EKA Y K ++++ ++ + ++ K DGD E SDKSKS+V D+ E
Sbjct: 67 RSMSDEEKAKYGGKKQEVQENKAAKKKESTSSKKAKTDGDEEEGEGSDKSKSDVEDDGEE 126
Query: 147 SGEEE 151
G E
Sbjct: 127 DGANE 131
>gi|221220618|gb|ACM08970.1| High mobility group protein B3 [Salmo salar]
gi|223646914|gb|ACN10215.1| High mobility group protein B3 [Salmo salar]
gi|223672777|gb|ACN12570.1| High mobility group protein B3 [Salmo salar]
Length = 201
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR KKA KDPN PKRPPS FFVF E R K ++PN + V K G W +++ +
Sbjct: 82 GKRGKKALKDPNAPKRPPSGFFVFCAEQRPKIKAQHPNF-GIGDVAKKLGEMWNNLTDSN 140
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKSK 137
K PY +KA KLK +Y K + Y + G + KSK
Sbjct: 141 KQPYLAKANKLKEKYQKDVADYKGGKVGGAGASKSK 176
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
AK D KPK SA+ F++ R+ K +NP + S K G+WK+MSP EK+ +E
Sbjct: 2 AKGDARKPKGKMSAYAYFVQTCREEHKNKNPEIPVNFSEFSKKCSGRWKTMSPKEKSKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
+A++ K+ Y +M +Y
Sbjct: 62 DQAKQDKARYDSEMTSY 78
>gi|221219912|gb|ACM08617.1| High mobility group protein B3 [Salmo salar]
Length = 201
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR KKA KDPN PKRPPS FFVF E R K ++PN + V K G W +++ +
Sbjct: 82 GKRGKKALKDPNAPKRPPSGFFVFCAEQRPKIKAQHPNF-GIGDVAKKLGEMWNNLTDSN 140
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKSK 137
K PY +KA KLK +Y K + Y + G + KSK
Sbjct: 141 KQPYLAKANKLKEKYQKDVADYKGGKVGGAGASKSK 176
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
AK D KPK SA+ F++ R+ K +NP + S K G+WK+MSP EK+ +E
Sbjct: 2 AKGDARKPKGKMSAYAYFVQTCREEHKNKNPEIPVNFSEFSKKCSGRWKTMSPKEKSKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
+A++ K+ Y +M +Y
Sbjct: 62 DQAKQDKARYDSEMTSY 78
>gi|303304752|emb|CBD77423.1| high mobility group box 2 protein [Plecoglossus altivelis]
Length = 215
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFFVF + R K ENP ++ + + K G W +P +K PYE+KA
Sbjct: 92 DPNAPKRPPSAFFVFCSDHRARIKGENPGIS-IGDIAKKLGELWSKQTPKDKQPYEAKAG 150
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDKSK 137
KLK +Y K + AY K SD K
Sbjct: 151 KLKEKYEKDVAAYRAKSGAGGKSDAGK 177
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDPNKP+ S++ F++ R+ KK++P + S K +WK+MS EK +E
Sbjct: 4 KDPNKPRGKTSSYAFFVQTCREEHKKKHPGTSVNFSEFSKKCSERWKTMSAKEKVKFEDL 63
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 64 AKGDKVRYDREMKGY 78
>gi|221220328|gb|ACM08825.1| High mobility group protein B3 [Salmo salar]
Length = 203
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR KKA KDPN PKRPPS FFVF E R K ++PN + V K G W +++ +
Sbjct: 82 GKRGKKALKDPNAPKRPPSGFFVFCAEQRPKIKAQHPNF-GIGDVAKKLGEMWNNLTDSN 140
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKSK 137
K PY +KA KLK +Y K + Y + G + KSK
Sbjct: 141 KQPYLAKANKLKEKYQKDVADYKGGKVGGAGASKSK 176
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
AK D KPK SA+ F++ R+ K +NP + S K G+WK+MSP EK+ +E
Sbjct: 2 AKGDARKPKGKMSAYAYFVQTCREEHKNKNPEIPVNFSEFSKKCSGRWKTMSPKEKSKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
+A++ K+ Y +M +Y
Sbjct: 62 DQAKQDKARYDLEMTSY 78
>gi|336272321|ref|XP_003350917.1| hypothetical protein SMAC_04223 [Sordaria macrospora k-hell]
gi|380090684|emb|CCC04854.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 103
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Query: 38 SKRQGKREKK-AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
SK GK EK+ AKKDPN PKR SA+ F E R+ ++ENP VT VGK G +WK+
Sbjct: 8 SKTTGKVEKRRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVT-FGQVGKILGERWKA 66
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
+S ++APYE+KA K Y + AYN + D +E+S
Sbjct: 67 LSDKQRAPYEAKAAADKKRYEDEKQAYNAEADEEESS 103
>gi|320091041|gb|ADW08807.1| high mobility group box X [Lethenteron camtschaticum]
Length = 225
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKRPPSAFF+F +FR K +NP + + + K G W + KAPYE K
Sbjct: 93 KKDPNAPKRPPSAFFIFCADFRPQIKADNPGMV-IGTIAKRLGEMWGRQTNENKAPYEHK 151
Query: 109 AEKLKSEYGKKMNAYNK 125
A LK +Y K + AY +
Sbjct: 152 ANILKEKYKKDVAAYQR 168
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPN-VTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
DP+KP+ S++ F++ R+ KK++PN A + + +WK +SP EK +E A
Sbjct: 5 DPSKPRGRMSSYAYFVQTCREEHKKKHPNDSVAFTDFSRKCSERWKGLSPKEKLRFEDLA 64
Query: 110 EKLKSEYGKKMNAYNKKQDG 129
K+ Y +M Y + G
Sbjct: 65 RADKTRYDTEMKDYAPARGG 84
>gi|349604600|gb|AEQ00107.1| High mobility group protein B3-like protein, partial [Equus
caballus]
Length = 118
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY
Sbjct: 2 KKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDSEKQPYN 60
Query: 107 SKAEKLKSEYGKKMNAYNKKQDGDEA 132
+KA KLK +Y K + Y K D A
Sbjct: 61 NKAAKLKEKYEKDVADYKSKGKFDGA 86
>gi|222087985|gb|ACM41855.1| high mobility group box 2-like protein [Epinephelus coioides]
Length = 212
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFFVF E R K+E P ++ + K G W + S EKAPYE+KA
Sbjct: 87 DPNAPKRPPSAFFVFCSEHRPRIKEECPGIS-IGDTAKKLGELWSTQSSKEKAPYEAKAA 145
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K++ AY K
Sbjct: 146 KLKEKYEKEVAAYRAK 161
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEK 111
NKP+ S++ F+ + R+ K+++P + A K +WK+MS EKA +E A+
Sbjct: 1 NKPRGKTSSYAFFIADCREEHKRKHPGTSVGFAEFSKKCSERWKTMSAKEKAKFEELAKT 60
Query: 112 LKSEYGKKMNAY 123
K Y ++M Y
Sbjct: 61 DKIRYDREMKTY 72
>gi|18420676|ref|NP_568431.1| high-mobility group B6 protein [Arabidopsis thaliana]
gi|75245985|sp|Q8LDF9.1|HMGB7_ARATH RecName: Full=High mobility group B protein 7; AltName:
Full=Nucleosome/chromatin assembly factor group D 07;
Short=Nucleosome/chromatin assembly factor group D 7
gi|21554154|gb|AAM63233.1| unknown [Arabidopsis thaliana]
gi|26452394|dbj|BAC43282.1| unknown protein [Arabidopsis thaliana]
gi|332005781|gb|AED93164.1| high-mobility group B6 protein [Arabidopsis thaliana]
Length = 241
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
EKK+ NKPKRP +AFF+F+ +FRKTFK E+ A A K G KWKS++ EK
Sbjct: 105 EKKSSSTSNKPKRPLTAFFIFMSDFRKTFKSEHNGSLAKDA-AKIGGEKWKSLTEEEKKV 163
Query: 105 YESKAEKLKSEYGKKM 120
Y KA +LK+EY K +
Sbjct: 164 YLDKAAELKAEYNKSL 179
>gi|335308835|ref|XP_003361389.1| PREDICTED: high mobility group protein B4-like [Sus scrofa]
Length = 198
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 66/110 (60%), Gaps = 7/110 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ G + K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 64 ALAKLDKARYQEEMRNYVGGKRKRRKRDPQAPRRPPSSFLLFCQDNYAQLKRENPNWS-V 122
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
+ V KA+ W + + +K PYE +A L+++Y ++++ Y K+ +G + S
Sbjct: 123 AQVAKASARMWSTTTDVDKQPYEQRAALLRAKYHEELSVYQKQFNGSKKS 172
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL + FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 10 KPKANVSSYIHFLLNYSNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 69
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 70 KARYQEEMRNY 80
>gi|225195617|gb|ACN82086.1| high-mobility group box 1 [Carassius auratus]
gi|225195619|gb|ACN82087.1| high-mobility group box 1 [Megalobrama amblycephala]
gi|225195623|gb|ACN82089.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K+E P ++ + V K G W S EK P+
Sbjct: 74 KKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETPGLS-IGDVAKKLGEMWNKTSAEEKQPF 132
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA +LK +Y K + AY K
Sbjct: 133 EKKAARLKEKYEKDITAYRSK 153
>gi|367043490|ref|XP_003652125.1| hypothetical protein THITE_126111 [Thielavia terrestris NRRL 8126]
gi|346999387|gb|AEO65789.1| hypothetical protein THITE_126111 [Thielavia terrestris NRRL 8126]
Length = 103
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 40 RQGKREKK-AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
+ GK EK+ KKDPN PKR SA+ F E R+ ++ENP V+ VGK G +WK++S
Sbjct: 8 KSGKVEKRRGKKDPNAPKRGLSAYMFFANEQRENVREENPGVS-FGQVGKILGERWKALS 66
Query: 99 PAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDE 131
++APYE+KA K Y + AYN + DGDE
Sbjct: 67 DKQRAPYEAKAAADKKRYEDEKQAYNAQADGDE 99
>gi|444707322|gb|ELW48604.1| High mobility group protein B4 [Tupaia chinensis]
Length = 189
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ G+R K+ K+DP P+RPPS+F +F ++ K+ENP+ T V
Sbjct: 64 ALAKLDKARYQEEMMNYVGRRRKRRKRDPQAPRRPPSSFILFCQDHYAQLKRENPSWTVV 123
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDG 129
V KA+G W M+ EK PYE +A L++ Y +++ Y K++
Sbjct: 124 Q-VAKASGKMWTVMTAVEKQPYEQRAALLRARYQEELEVYRKQRQA 168
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
+PK S++ FL +R FK++ PN + KWKS+S EKA YE+ A+
Sbjct: 10 RPKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWKSISKHEKAKYEALAKLD 69
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 70 KARYQEEMMNY 80
>gi|609551|gb|AAA58771.1| HMG-1 [Oncorhynchus mykiss]
Length = 204
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRP SAFF+F +FR K E P ++ + V K G KW +++ +K PY
Sbjct: 85 KKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLS-IGDVAKKLGEKWNNLTAEDKVPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKASKLKEKYEKDITAYRNK 164
Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +WK+MS EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|1085210|pir||S48708 high-mobility-group-1 protein - trout
Length = 204
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRP SAFF+F +FR K E P ++ + V K G KW +++ +K PY
Sbjct: 85 KKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLS-IGDVAKKLGEKWNNLTAEDKVPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKASKLKEKYEKDITAYRNK 164
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R KK++P + S K +WK+MS EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRIEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|118343938|ref|NP_001071793.1| transcription factor protein [Ciona intestinalis]
gi|70570759|dbj|BAE06616.1| transcription factor protein [Ciona intestinalis]
Length = 164
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
+KR + K +KD N PK+P +A+F+F+ + R+ KENP++ +++ + K G KW+
Sbjct: 4 TKRSSLKTLKFRKDKNAPKKPLTAYFIFMNDCRQKVIKENPSL-SITEISKLVGKKWRET 62
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYN 124
S +K P+ KA KL+ EY KK+ YN
Sbjct: 63 STKDKEPFNKKAAKLREEYNKKLEKYN 89
>gi|9759080|dbj|BAB09558.1| unnamed protein product [Arabidopsis thaliana]
Length = 226
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
EKK+ NKPKRP +AFF+F+ +FRKTFK E+ A A K G KWKS++ EK
Sbjct: 90 EKKSSSTSNKPKRPLTAFFIFMSDFRKTFKSEHNGSLAKDA-AKIGGEKWKSLTEEEKKV 148
Query: 105 YESKAEKLKSEYGKKM 120
Y KA +LK+EY K +
Sbjct: 149 YLDKAAELKAEYNKSL 164
>gi|410966739|ref|XP_003989887.1| PREDICTED: high mobility group protein B4 [Felis catus]
Length = 193
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GK++K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 64 ALAKLDKARYQEEMMNYGGKKKKRRKRDPYAPRRPPSSFLLFCQDHYAQLKRENPNWSVV 123
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKS 136
V KA+G W + + AEK PYE +A L+++Y + + Y K++ ++ +S
Sbjct: 124 Q-VAKASGKMWSATTGAEKQPYEQRAALLRAKYQEDLEIYRKQRKANKGHQRS 175
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
+PK S++ FL +R FK++ PN + + KW+S+S EKA YE+ A+
Sbjct: 10 RPKANVSSYIHFLLNYRNKFKEQQPNTYLSFKEFSRKCSEKWRSISKHEKAKYEALAKLD 69
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 70 KARYQEEMMNY 80
>gi|403293162|ref|XP_003937591.1| PREDICTED: high mobility group protein B4 [Saimiri boliviensis
boliviensis]
Length = 254
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 125 ALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVV 184
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKSKSEVNDE 143
V KA G W + + EK PYE +A L+++Y +++ Y K++ + K +++
Sbjct: 185 Q-VAKATGKMWSATTDLEKQPYEQRAALLRAKYFEELELYRKQRKQCKQRTTRKYQLSAR 243
Query: 144 DEASGEEEHQ 153
+ G+ Q
Sbjct: 244 NRCRGKRVRQ 253
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 71 KPKANVSSYIHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 130
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 131 KARYQEEMMNY 141
>gi|225715078|gb|ACO13385.1| High mobility group protein B3 [Esox lucius]
Length = 204
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR KKAKKDPN PKRPPS FFVF E R K ++P+ + V K G W +++ +
Sbjct: 82 GKRGKKAKKDPNAPKRPPSGFFVFCAEQRPKIKAQHPSF-GIGDVAKKLGEAWNNLTDSS 140
Query: 102 KAPYESKAEKLKSEYGKKMNAYNK---KQDGDEASDKSKSE 139
K PY +KA KLK +Y K + Y + K G AS K+E
Sbjct: 141 KQPYLAKANKLKEKYRKDVADYKRGTGKPGGAGASKPKKAE 181
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
AK D KPK SA+ F++ R+ KK+NP + S K G+WK+MSP EK+ +E
Sbjct: 2 AKGDARKPKGKMSAYAYFVQTCREEHKKKNPEIPVNFSEFSKKCAGRWKTMSPKEKSKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
+A + K+ Y +M +Y
Sbjct: 62 DQANQDKARYESEMTSY 78
>gi|185135647|ref|NP_001118186.1| high mobility group-T protein [Oncorhynchus mykiss]
gi|123382|sp|P07746.2|HMGT_ONCMY RecName: Full=High mobility group-T protein; Short=HMG-T; AltName:
Full=HMG-T1; Short=HMG-1
gi|64328|emb|CAA26500.1| unnamed protein product [Oncorhynchus mykiss]
Length = 204
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRP SAFF+F +FR K E P ++ + V K G KW +++ +K PY
Sbjct: 85 KKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLS-IGDVAKKLGEKWNNLTAEDKVPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA +LK +Y K + AY K
Sbjct: 144 EKKASRLKEKYEKDITAYRNK 164
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +WK+MS EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTRREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|148223673|ref|NP_001079576.1| HMG-X protein [Xenopus laevis]
gi|639691|dbj|BAA06440.1| HMG-X protein [Xenopus laevis]
Length = 212
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G+ + K KKDPN PKRPPSAFF+F E R K E P ++ + K G W +P
Sbjct: 82 KGETKGKRKKDPNAPKRPPSAFFIFCSEHRPQIKSETPGLS-IGDTAKKLGELWAEQTPK 140
Query: 101 EKAPYESKAEKLKSEYGKKMNAYNKKQDGD 130
+K P+E KA KLK +Y K + AY K D
Sbjct: 141 DKLPHEQKAAKLKEKYEKDVAAYRAKGKSD 170
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DPNKP+ S++ F++ R+ KK++P+ + S K +WKSMS EK +E
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSDFSKKCSERWKSMSAKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 62 DLAKGDKARYEREMKTY 78
>gi|297812491|ref|XP_002874129.1| hypothetical protein ARALYDRAFT_910356 [Arabidopsis lyrata subsp.
lyrata]
gi|297319966|gb|EFH50388.1| hypothetical protein ARALYDRAFT_910356 [Arabidopsis lyrata subsp.
lyrata]
Length = 193
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
EKK+ NKPKRP +AFF+F+ +FRKTFK E+ A A K G KWKS++ EK
Sbjct: 105 EKKSSSTSNKPKRPLTAFFIFMNDFRKTFKTEHNGSLAKDA-AKIGGEKWKSLTEEEKKV 163
Query: 105 YESKAEKLKSEYGKKM 120
Y KA +LK+EY K +
Sbjct: 164 YLDKAAELKAEYNKSL 179
>gi|74628491|sp|Q7S045.1|NHP6_NEUCR RecName: Full=Non-histone chromosomal protein 6
gi|336464617|gb|EGO52857.1| Non-histone chromosomal protein 6 [Neurospora tetrasperma FGSC
2508]
gi|350296712|gb|EGZ77689.1| Non-histone chromosomal protein 6 [Neurospora tetrasperma FGSC
2509]
Length = 103
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Query: 38 SKRQGKREKK-AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
SK GK EK+ AKKDPN PKR SA+ F E R+ ++ENP V+ VGK G +WK+
Sbjct: 8 SKTTGKVEKRRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVS-FGQVGKILGERWKA 66
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
+S ++APYE+KA K Y + AYN + D +E+S
Sbjct: 67 LSDKQRAPYEAKAAADKKRYEDEKQAYNAEADEEESS 103
>gi|221221482|gb|ACM09402.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRP SAFF+F +FR K E P ++ + V K G KW +++ +K PY
Sbjct: 85 KKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLS-IGDVAKKLGEKWNNLTAEDKVPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA +LK +Y K + AY K
Sbjct: 144 EKKAARLKEKYEKDITAYRNK 164
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +W++MS EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 63 AKLDKMRYEREMRSY 77
>gi|27881711|gb|AAH44715.1| MGC52578 protein [Xenopus laevis]
Length = 212
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G+ + K KKDPN PKRPPSAFF+F E R K E P ++ + K G W +P
Sbjct: 82 KGETKGKRKKDPNAPKRPPSAFFIFCSEHRPQIKSETPGLS-IGDTAKKLGELWAEQTPK 140
Query: 101 EKAPYESKAEKLKSEYGKKMNAYNKKQDGD 130
+K P+E KA KLK +Y K + AY K D
Sbjct: 141 DKLPHEQKAAKLKEKYEKDVAAYRAKGKSD 170
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DPNKP+ S++ F++ R+ KK++P+ + S K +WKSMS EK +E
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSEFSKKCSERWKSMSAKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 62 DLAKGDKARYEREMKTY 78
>gi|392333067|ref|XP_003752781.1| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
gi|392353165|ref|XP_001067503.2| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
Length = 212
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY
Sbjct: 99 KKKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGIS-IEDVVKKLGEMWNNLSDSEKQPYM 157
Query: 107 SKAEKLKSEYGKKMNAY--NKKQDG 129
+KA KLK +Y K + Y N + DG
Sbjct: 158 TKAAKLKEKYEKDVADYKSNGQFDG 182
>gi|359062996|ref|XP_003585778.1| PREDICTED: high mobility group protein B3-like, partial [Bos
taurus]
Length = 186
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGIS-IGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDKSKS---EVNDEDE 145
KLK +Y K + Y K D A +K +V +EDE
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGAKGAAKVAQKKVEEEDE 185
>gi|356528116|ref|XP_003532651.1| PREDICTED: high mobility group protein B2-like [Glycine max]
Length = 234
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Query: 51 DPNKPKRPPSAFF----VFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
D KPK+ PSAFF +F+E+FRK F+++NP++ ++ +GKA G KWK+M+ EK Y
Sbjct: 41 DAMKPKKSPSAFFPLFSLFMEDFRKEFQEQNPDIKSMYDIGKACGEKWKTMTYEEKVKYY 100
Query: 107 SKAEKLKSEYGKKMNAYNKKQDGDEA 132
A + + E+ + M +N K D +A
Sbjct: 101 DIASEKRIEFDRAMAKFNNKMDILKA 126
>gi|310793467|gb|EFQ28928.1| HMG box protein [Glomerella graminicola M1.001]
Length = 103
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+AKKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK+++ ++APY
Sbjct: 17 KRAKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKILGERWKALNDKQRAPY 75
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
E+KA K Y + AYN +Q+ DE+S
Sbjct: 76 EAKAATDKKRYEDEKQAYNAEQEEDESS 103
>gi|301763549|ref|XP_002917185.1| PREDICTED: high mobility group protein B4-like [Ailuropoda
melanoleuca]
Length = 193
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 65/104 (62%), Gaps = 7/104 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GK++K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 64 ALAKLDKARYQEEMMNYVGKKKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVV 123
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
V KA+G W + + AEK PYE +A L+++Y +++ Y K++
Sbjct: 124 Q-VAKASGKMWSATTDAEKQPYEQRAALLRAKYQEELEIYRKQR 166
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
+PK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 10 RPKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 69
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 70 KARYQEEMMNY 80
>gi|225703866|gb|ACO07779.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 194
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
++KK KDPN PKRPPSAFF+F +FR K E+P ++ + K G W S + EK
Sbjct: 83 QKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHPGLS-IGDTAKKLGVMWNSSAAEEKK 141
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
PYE KA LK +Y K + +Y D AS
Sbjct: 142 PYEKKAATLKEKYDKDIASYRTNGRVDTAS 171
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R KK++P + A K +WK MSP EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y ++M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|221221922|gb|ACM09622.1| High mobility group protein B1 [Salmo salar]
Length = 196
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
++KK KDPN PKRPPSAFF+F +FR K E+P ++ + K G W S + EK
Sbjct: 83 QKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHPGLS-IGDTAKKLGVMWNSSAAEEKK 141
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
PYE KA LK +Y K + +Y D AS
Sbjct: 142 PYEKKAATLKEKYDKDIASYRTNGRVDTAS 171
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R KK++P + A K +WK MSP EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y ++M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|221219434|gb|ACM08378.1| High mobility group protein B1 [Salmo salar]
Length = 196
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
++KK KDPN PKRPPSAFF+F +FR K E+P ++ + K G W S + EK
Sbjct: 83 QKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHPGLS-IGDTAKKLGVMWNSSAAEEKK 141
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
PYE KA LK +Y K + +Y D AS
Sbjct: 142 PYEKKAATLKEKYDKDIASYRTNGRVDTAS 171
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R KK++P + A K +WK MSP EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y ++M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|348538096|ref|XP_003456528.1| PREDICTED: high mobility group protein B2-like [Oreochromis
niloticus]
Length = 196
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFFVF + R K++NP ++ + + K G W + S +KAPYE+KA
Sbjct: 91 DPNAPKRPPSAFFVFCSDHRPKIKEDNPGIS-IGDIAKKLGEMWATQSAKDKAPYEAKAA 149
Query: 111 KLKSEYGKKMNAYNKK 126
+LK +Y K + AY K
Sbjct: 150 RLKEKYEKDVAAYRAK 165
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESK 108
KDPNKP+ S++ F+ R+ KK++P + A K +WK+MSP EK +E
Sbjct: 3 KDPNKPRGKTSSYAFFVATCREEHKKKHPGTSVNFAEFSKKCSERWKTMSPKEKGKFEEM 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 AKNDKVRYDREMKTY 77
>gi|18403553|ref|NP_565788.1| high mobility group (HMG1/2) domain-containing protein [Arabidopsis
thaliana]
gi|75219838|sp|O64702.2|HMG14_ARATH RecName: Full=High mobility group B protein 14; AltName:
Full=Nucleosome/chromatin assembly factor group D 14
gi|20197083|gb|AAC26692.2| putative HMG protein [Arabidopsis thaliana]
gi|20197160|gb|AAM14948.1| putative HMG protein [Arabidopsis thaliana]
gi|21536857|gb|AAM61189.1| putative HMG protein [Arabidopsis thaliana]
gi|26452914|dbj|BAC43535.1| putative HMG protein [Arabidopsis thaliana]
gi|28973511|gb|AAO64080.1| putative HMG protein [Arabidopsis thaliana]
gi|330253881|gb|AEC08975.1| high mobility group (HMG1/2) domain-containing protein [Arabidopsis
thaliana]
Length = 151
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 49/74 (66%)
Query: 55 PKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKS 114
PK+P +AFF FL++FRK +++ENP+V ++ +GK G KWK+M+ EK Y A + +
Sbjct: 63 PKKPATAFFFFLDDFRKQYQEENPDVKSMREIGKTCGEKWKTMTYEEKVKYYDIATEKRE 122
Query: 115 EYGKKMNAYNKKQD 128
E+ + M Y K+ +
Sbjct: 123 EFHRAMTEYTKRME 136
>gi|225704132|gb|ACO07912.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 194
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
++KK KDPN PKRPPSAFF+F +FR K E+P ++ + K G W S + EK
Sbjct: 83 QKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHPGLS-IGDTAKKLGVMWNSSAAEEKK 141
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
PYE KA LK +Y K + +Y D AS
Sbjct: 142 PYEKKAATLKEKYDKDIASYRTNGRVDTAS 171
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R KK++P + A K +WK MSP EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y +M Y
Sbjct: 63 AKQDKVRYEGEMKNY 77
>gi|49258306|pdb|1J3C|A Chain A, Solution Structure Of The C-Terminal Domain Of The Hmgb2
Length = 79
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKRPPSAFF+F E+R K E+P ++ + K G W S +K PYE K
Sbjct: 3 KKDPNAPKRPPSAFFLFCSEYRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQK 61
Query: 109 AEKLKSEYGKKMNAYNKK 126
A KLK +Y K + AY K
Sbjct: 62 AAKLKEKYEKDIAAYRAK 79
>gi|297826905|ref|XP_002881335.1| high mobility group family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327174|gb|EFH57594.1| high mobility group family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 152
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 55 PKRPPSAFFVFLEEFRKTFKKENPNVTAVS-AVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
PK+PP+AFF FLE+FRK +++ENP V ++ +GK G KWK+M+ EK Y A + +
Sbjct: 64 PKKPPTAFFFFLEDFRKQYQEENPEVKSMREVIGKTCGEKWKTMTYEEKVKYYDIATEKR 123
Query: 114 SEYGKKMNAYNKKQD 128
E+ + M Y K+ +
Sbjct: 124 EEFHRAMTEYTKRME 138
>gi|45361297|ref|NP_989226.1| high mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|38969943|gb|AAH63332.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|89267209|emb|CAJ81415.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|89272910|emb|CAJ82928.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
Length = 211
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K E+P T + + K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGST-IGDIAKKLGEMWNNTATDDKLPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 ERKAAKLKEKYEKDVAAYRAK 165
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 MAKADKVRYEREMKTY 78
>gi|395857208|ref|XP_003800997.1| PREDICTED: high mobility group protein B3-like [Otolemur garnettii]
Length = 225
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ V V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-VGDVAKKLGEMWNNLSDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDKSK 137
KLK +Y K + Y K D A +K
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGAKGPTK 174
>gi|145480005|ref|XP_001426025.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393097|emb|CAK58627.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV--------TAVSAVGKAAGGKWKS 96
EKK ++DPN PKRP +AFF+F +++R+ + NP + + + + AG KW+S
Sbjct: 23 EKKKERDPNAPKRPLTAFFLFSQKYREKVLERNPGIDLSDYQLEVKLIQISQMAGQKWQS 82
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
MS EK PY + + KS+Y + YN+KQ
Sbjct: 83 MSEQEKQPYVDQYNQAKSKYNDDVKEYNEKQ 113
>gi|281349442|gb|EFB25026.1| hypothetical protein PANDA_005395 [Ailuropoda melanoleuca]
Length = 181
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 65/104 (62%), Gaps = 7/104 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GK++K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 62 ALAKLDKARYQEEMMNYVGKKKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
V KA+G W + + AEK PYE +A L+++Y +++ Y K++
Sbjct: 122 Q-VAKASGKMWSATTDAEKQPYEQRAALLRAKYQEELEIYRKQR 164
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
+PK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 8 RPKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|426258242|ref|XP_004022724.1| PREDICTED: high mobility group protein B3 [Ovis aries]
Length = 248
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 160 DPNAPKRPPSGFFLFCSEFRPKIKSANPGIS-IGDVAKKLGEMWNNLSDSEKQPYINKAA 218
Query: 111 KLKSEYGKKMNAYNKKQDGDEA 132
KLK +Y K + Y K D A
Sbjct: 219 KLKEKYEKDVADYKSKGKFDGA 240
>gi|145536343|ref|XP_001453899.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421632|emb|CAK86502.1| unnamed protein product [Paramecium tetraurelia]
Length = 236
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
EKK ++DPN PK+P +AFF+F +++R+ + NP + ++ + + AG KW SMS EK P
Sbjct: 42 EKKKERDPNAPKKPLTAFFLFNQKYRQKVVERNPEI-KLTQISQMAGNKWTSMSEQEKKP 100
Query: 105 YESKAEKLKSEYGKKMNAYNKKQDGDEASDK--SKSEVNDEDEASGEEEHQLE 155
Y + K +Y +++ YN+K +G E +DK KSE DE +H ++
Sbjct: 101 YLDQYNAAKEKYDQELKDYNEK-NGIETNDKKRKKSEKFDEKSMKSAVDHNVD 152
>gi|297812105|ref|XP_002873936.1| hypothetical protein ARALYDRAFT_488801 [Arabidopsis lyrata subsp.
lyrata]
gi|297319773|gb|EFH50195.1| hypothetical protein ARALYDRAFT_488801 [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
EKK+ NKPKRP +AFF+F+ +FRKTFK E+ A A K G KW S++ EK
Sbjct: 102 EKKSSSTSNKPKRPLTAFFIFMNDFRKTFKTEHNGSFAKDA-AKIGGEKWMSLTEDEKKV 160
Query: 105 YESKAEKLKSEYGKKMN 121
Y KA +LK+EY K+ N
Sbjct: 161 YLDKAAELKAEYNKRSN 177
>gi|367020358|ref|XP_003659464.1| hypothetical protein MYCTH_2296547 [Myceliophthora thermophila ATCC
42464]
gi|347006731|gb|AEO54219.1| hypothetical protein MYCTH_2296547 [Myceliophthora thermophila ATCC
42464]
Length = 101
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 40 RQGKREKK-AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
R GK EKK +KKDPN PKR SA+ F E R+ ++ENP V+ VGK G +WK++S
Sbjct: 8 RSGKAEKKRSKKDPNAPKRGLSAYMFFANEQRENVREENPGVS-FGQVGKILGERWKALS 66
Query: 99 PAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
++APYE+KA K Y + AYN D D +S
Sbjct: 67 DKQRAPYEAKAAADKKRYEDEKQAYNADGDDDASS 101
>gi|3551257|dbj|BAA32827.1| 98b [Daucus carota]
Length = 502
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
P KPK P SAFF+F+ E R E NV V GK G +WK+M+ EKAPYE A+K
Sbjct: 287 PLKPKHPVSAFFLFMNERRADLVAEKKNVLEV---GKITGEEWKNMTEKEKAPYEEMAKK 343
Query: 112 LKSEYGKKMNAYNKKQDGDEAS 133
K++Y ++M Y KK+D + AS
Sbjct: 344 NKNQYLQQMEVYKKKKDEEAAS 365
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 23 KVGKRKAATAKLDSGSKRQGKREKKAKK---DPNKPKRPPSAFFVFLEEFRKTFKKENPN 79
++ K+K T L +K + ++++K +K DPNKPKRP S+F +F +E RKT +E P
Sbjct: 383 QLLKKKEKTENLIKKTKEERQKKQKGEKKIVDPNKPKRPASSFLLFSKEARKTISEERPG 442
Query: 80 VTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDE 131
+ S + KWK +S EK + KA Y K+M YNK +E
Sbjct: 443 INN-STLNALISVKWKEISHEEKQLWNEKAAGAMEAYKKEMEEYNKTTAAEE 493
>gi|356510782|ref|XP_003524113.1| PREDICTED: high mobility group B protein 14-like [Glycine max]
Length = 165
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K + K K D K K+P S FF FLE+FRK F+ NP+V + +GKA+ KWK+M+ EK
Sbjct: 55 KLKAKQKFDAMKQKKPLSGFFYFLEDFRKEFQVRNPDVKSKRDIGKASAKKWKTMTYEEK 114
Query: 103 APYESKAEKLKSEYGKKMNAYNKKQDGDEASDKSKSEVNDEDEASGEEEH 152
A Y A K E+ M +NKK + S SE+ DE E E
Sbjct: 115 AQYFDIATKKHDEFDSAMAEFNKKMISN-LSFLLASELTLVDETDEESEF 163
>gi|357139210|ref|XP_003571177.1| PREDICTED: high mobility group B protein 13-like [Brachypodium
distachyon]
Length = 537
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+KPK+P SA+FV+ +E R E NV +GK G +WKSM+ A+KAPYE A
Sbjct: 325 DPSKPKQPMSAYFVYSQERRAALVAEKKNV---PEIGKITGEEWKSMTDAQKAPYEEVAS 381
Query: 111 KLKSEYGKKMNAYNKK 126
K K EY K+M Y +K
Sbjct: 382 KQKEEYHKQMEVYKQK 397
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PK+P S+F +F +E RK +E P V S + KWK +S EK + KA
Sbjct: 450 DPNRPKKPASSFLLFSKEARKQLVEERPGVNN-STINALISVKWKELSGTEKKTWSEKAA 508
Query: 111 KLKSEYGKKMNAYN 124
+ + Y ++M Y
Sbjct: 509 EGMAAYKREMEEYT 522
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N+ K+P A+ ++ ++ KKEN + V A G KWK++S EK PYE + +
Sbjct: 207 NERKKPCPAYLLWCKDQWAEIKKENSDAD-FKEVSNALGAKWKTISAEEKQPYEERYRQE 265
Query: 113 KSEY 116
K Y
Sbjct: 266 KEAY 269
>gi|387016392|gb|AFJ50315.1| High mobility group protein B1 [Crotalus adamanteus]
Length = 215
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + S +K P+
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTSSEDKQPF 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAGKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A K Y ++M Y
Sbjct: 63 MARADKVRYEREMKTY 78
>gi|397482786|ref|XP_003812597.1| PREDICTED: high mobility group protein B4 [Pan paniscus]
Length = 177
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 7/106 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 62 ALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDG 129
V KA G W +++ EK PYE +A L+++Y +++ Y K+ +
Sbjct: 122 Q-VAKATGKMWSTVTDLEKHPYEQRAALLRAKYFEELELYRKQCNA 166
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|332808386|ref|XP_513298.3| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B4 [Pan
troglodytes]
Length = 186
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 7/106 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 62 ALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDG 129
V KA G W +++ EK PYE +A L+++Y +++ Y K+ +
Sbjct: 122 Q-VAKATGKMWSTVTDLEKHPYEQRAALLRAKYFEELELYRKQCNA 166
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|355694844|gb|AER99804.1| high-mobility group box 3 [Mustela putorius furo]
Length = 197
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S EK PY +KA
Sbjct: 91 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDGEKQPYNNKAA 149
Query: 111 KLKSEYGKKMNAYNKKQDGDEA 132
KLK +Y K + Y K D A
Sbjct: 150 KLKEKYEKDVADYKSKGKFDGA 171
>gi|281338637|gb|EFB14221.1| hypothetical protein PANDA_014002 [Ailuropoda melanoleuca]
Length = 168
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 111 KLKSEYGKKMNAYNKKQDGD 130
KLK +Y K + Y K D
Sbjct: 148 KLKEKYEKDVADYKSKGKFD 167
>gi|387914724|gb|AFK10971.1| high mobility group box 1 [Callorhinchus milii]
Length = 226
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F R ++E P ++ + + K G KW +M EK PYE +A+
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLS-IGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 111 KLKSEYGKKMNAYNKKQDGDEASD 134
KLK +Y K + AY K D +
Sbjct: 166 KLKEKYKKDVAAYRAKTKPDSVKN 189
Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENP-NVTAVSAVGKAAGGKWKSMSPAEKAP 104
+K +DP KP+ ++ +F++ R+ KK++P V + + K +WK+MS EK+
Sbjct: 15 RKMARDPKKPRGRLTSHALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKSK 74
Query: 105 YESKAEKLKSEYGKKMNAY 123
+E +++ K Y +M Y
Sbjct: 75 FEELSKEDKKRYESEMKDY 93
>gi|392884154|gb|AFM90909.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F R ++E P ++ + + K G KW +M EK PYE +A+
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLS-IGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 111 KLKSEYGKKMNAYNKKQDGDEASD 134
KLK +Y K + AY K D +
Sbjct: 166 KLKEKYKKDVAAYRAKTKPDSVKN 189
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENP-NVTAVSAVGKAAGGKWKSMSPAEKAP 104
+K +DP KP+ +++ +F++ R+ KK++P V + + K +W++MS EK+
Sbjct: 15 RKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWETMSAKEKSK 74
Query: 105 YESKAEKLKSEYGKKMNAY 123
+E +++ K Y +M Y
Sbjct: 75 FEELSKEDKKRYESEMKDY 93
>gi|392878936|gb|AFM88300.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F R ++E P ++ + + K G KW +M EK PYE +A+
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLS-IGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 111 KLKSEYGKKMNAYNKKQDGDEA 132
KLK +Y K + AY K D
Sbjct: 166 KLKEKYKKDVAAYRAKTKPDSV 187
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENP-NVTAVSAVGKAAGGKWKSMSPAEKAP 104
+K +DP KP+ +++ +F++ R+ KK++P V + + K +WK+MS EK+
Sbjct: 15 RKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKSK 74
Query: 105 YESKAEKLKSEYGKKMNAY 123
+E +++ K Y +M Y
Sbjct: 75 FEELSKEDKKRYESEMKDY 93
>gi|392879586|gb|AFM88625.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F R ++E P ++ + + K G KW +M EK PYE +A+
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLS-IGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 111 KLKSEYGKKMNAYNKKQDGDEASD 134
KLK +Y K + AY K D +
Sbjct: 166 KLKEKYKKDVAAYRAKTKPDSVKN 189
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENP-NVTAVSAVGKAAGGKWKSMSPAEKAP 104
+K +DP KP+ +++ +F++ R+ KK++P V + + K +WK+MS EK+
Sbjct: 15 RKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKSK 74
Query: 105 YESKAEKLKSEYGKKMNAY 123
+E +++ K Y +M Y
Sbjct: 75 FEELSKEDKKRYESEMKDY 93
>gi|311277128|ref|XP_003135516.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 202
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 111 KLKSEYGKKMNAYNKKQDGDEA 132
KLK +Y K + Y K D A
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|326499588|dbj|BAJ86105.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+KPK+P SA+F++ +E R E V +GK G +WK M+ A+KAPYE A
Sbjct: 330 DPSKPKQPMSAYFLYSQERRGALVAEKKTV---PEIGKITGEEWKGMTEAQKAPYEEAAR 386
Query: 111 KLKSEYGKKMNAYNKKQDGDEAS 133
K K Y K+M YN+K+ G+ AS
Sbjct: 387 KQKEAYQKQMEVYNQKKLGENAS 409
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PK+P S+F +F +E RK +E P V S + KWK +S AEK + KA
Sbjct: 455 DPNRPKKPASSFLLFSKEARKQLAEERPGVNN-STLSALISVKWKDLSSAEKKVWSQKAA 513
Query: 111 KLKSEYGKKMNAYNKKQDGDEAS 133
+ + Y +M+ Y K ++
Sbjct: 514 QGMAAYKMEMDEYTKAHTSSSST 536
>gi|392876654|gb|AFM87159.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F R ++E P ++ + + K G KW +M EK PYE +A+
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLS-IGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 111 KLKSEYGKKMNAYNKKQDGDEASD 134
KLK +Y K + AY K D +
Sbjct: 166 KLKEKYKKDVAAYRAKTKPDSVKN 189
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENP-NVTAVSAVGKAAGGKWKSMSPAEKAP 104
+K +DP KP+ +++ +F++ R+ KK++P V + + K WK+MS EK+
Sbjct: 15 RKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSEGWKTMSAKEKSK 74
Query: 105 YESKAEKLKSEYGKKMNAY 123
+E +++ K Y +M Y
Sbjct: 75 FEELSKEDKKRYESEMKDY 93
>gi|444323521|ref|XP_004182401.1| hypothetical protein TBLA_0I02240 [Tetrapisispora blattae CBS 6284]
gi|387515448|emb|CCH62882.1| hypothetical protein TBLA_0I02240 [Tetrapisispora blattae CBS 6284]
Length = 94
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDPN PKR SA+ F E R + ENP+VT VGK G +WK++S EK
Sbjct: 9 KRSTRRKKDPNAPKRALSAYMFFANETRDIVRSENPDVT-FGQVGKILGERWKALSAEEK 67
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PYE+KAE K Y + YN
Sbjct: 68 VPYETKAEADKKRYESEKELYN 89
>gi|392876858|gb|AFM87261.1| high mobility group protein [Callorhinchus milii]
gi|392878442|gb|AFM88053.1| high mobility group protein [Callorhinchus milii]
gi|392880194|gb|AFM88929.1| high mobility group protein [Callorhinchus milii]
gi|392881188|gb|AFM89426.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F R ++E P ++ + + K G KW +M EK PYE +A+
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLS-IGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 111 KLKSEYGKKMNAYNKKQDGDEASD 134
KLK +Y K + AY K D +
Sbjct: 166 KLKEKYKKDVAAYRAKTKPDSVKN 189
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENP-NVTAVSAVGKAAGGKWKSMSPAEKAP 104
+K +DP KP+ +++ +F++ R+ KK++P V + + K +WK+MS EK+
Sbjct: 15 RKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKSK 74
Query: 105 YESKAEKLKSEYGKKMNAY 123
+E +++ K Y +M Y
Sbjct: 75 FEELSKEDKKRYESEMKDY 93
>gi|148234528|ref|NP_001080836.1| high mobility group box 1 [Xenopus laevis]
gi|32450384|gb|AAH54148.1| Hmgb1-prov protein [Xenopus laevis]
Length = 211
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K E+P T + + K G W + + +K P+
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGST-IGDIAKKLGEMWNNTATDDKLPF 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 ERKAAKLKEKYEKDVAAYRAK 165
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 MAKADKVRYEREMKTY 78
>gi|345780695|ref|XP_851529.2| PREDICTED: high mobility group protein B4 [Canis lupus familiaris]
Length = 193
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 7/105 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GK++K+ K+DP P+RPPS+F +F ++ K+ENP + V
Sbjct: 64 ALAKLDKARYQEEMMNYVGKKKKRRKRDPQAPRRPPSSFLIFCQDHYAQLKRENPTWSVV 123
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQD 128
V KA+G W S AEK PYE +A L++ Y +++ Y ++++
Sbjct: 124 Q-VAKASGRMWSVTSGAEKQPYEQRAAVLRARYQEELEVYRQQRN 167
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
+PK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 10 RPKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 69
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 70 KARYQEEMMNY 80
>gi|56788496|gb|AAW29969.1| unknown [Sus scrofa]
gi|56792880|gb|AAW30632.1| unknown [Sus scrofa]
Length = 193
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E A KLK +Y K + AY K D A
Sbjct: 145 EKXAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|196005089|ref|XP_002112411.1| hypothetical protein TRIADDRAFT_56397 [Trichoplax adhaerens]
gi|190584452|gb|EDV24521.1| hypothetical protein TRIADDRAFT_56397 [Trichoplax adhaerens]
Length = 253
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 10/83 (12%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKK----ENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
K DP+KPKRP +A+F FL EFRK K E +T++S G KW++M+PAEKA
Sbjct: 133 KADPDKPKRPQTAYFYFLAEFRKAMKAKGVIEGKKLTSLS------GEKWRAMTPAEKAK 186
Query: 105 YESKAEKLKSEYGKKMNAYNKKQ 127
YE+ K K Y ++M+AY KK+
Sbjct: 187 YEAMVTKDKERYQREMDAYRKKK 209
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 56 KRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSE 115
K+P SA+ F R+ KK + + K G +W++M+ ++K PY+ A + K
Sbjct: 63 KKPKSAYIFFTTSLRQRLKKSGREMPKAHEIAKMCGSEWRAMTASQKKPYDELAARDKQR 122
Query: 116 YGKKMNAYNKKQDGD 130
Y ++++ + KK D D
Sbjct: 123 YMEEISKFRKKADPD 137
>gi|302497713|ref|XP_003010856.1| hypothetical protein ARB_02895 [Arthroderma benhamiae CBS 112371]
gi|291174401|gb|EFE30216.1| hypothetical protein ARB_02895 [Arthroderma benhamiae CBS 112371]
Length = 106
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKR SA+ +F E R ++ENPN+T VGK G +WK++S ++ PYE
Sbjct: 16 KKKKDPNAPKRGLSAYMIFANEQRAAVREENPNIT-FGQVGKVLGERWKALSDKQRVPYE 74
Query: 107 SKAEKLKSEYGKKMNAYNK-----KQDGDEAS 133
KA K Y + AYN +QD +E+S
Sbjct: 75 EKAATDKQRYEDEKAAYNTNINQSRQDDEESS 106
>gi|253756810|gb|ACT35162.1| HmgB3y, partial [Monodelphis domestica]
Length = 193
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S EK PY +KA
Sbjct: 86 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDNEKQPYNNKAA 144
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDKSKS 138
KLK +Y K + Y K D +K+
Sbjct: 145 KLKEKYEKDVADYKSKGKFDSVKGTAKA 172
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKA 109
DP KPK SA+ F++ R+ KK+NP V A K +WK+MS EK+ ++ A
Sbjct: 2 DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKNMSGKEKSKFDEMA 61
Query: 110 EKLKSEYGKKMNAY 123
+ K Y ++M Y
Sbjct: 62 KADKLRYDREMKDY 75
>gi|148238271|ref|NP_001081794.1| high mobility group protein-1 [Xenopus laevis]
gi|709959|gb|AAC59859.1| high mobility group protein-1 [Xenopus laevis]
Length = 210
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F +FR K E+P T + + K G W + + +K PY
Sbjct: 85 KKRFKDPNAPKRPPSAFFLFCSDFRPKIKGEHPGST-IGDIAKKLGEMWNNTATDDKLPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E +A KLK +Y K + AY K
Sbjct: 144 ERRAAKLKEKYEKDVAAYRAK 164
>gi|49115548|gb|AAH73449.1| HMG-1 protein [Xenopus laevis]
Length = 210
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F +FR K E+P T + + K G W + + +K PY
Sbjct: 85 KKRFKDPNAPKRPPSAFFLFCSDFRPKIKGEHPGST-IGDIAKKLGEMWNNTATDDKLPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E +A KLK +Y K + AY K
Sbjct: 144 ERRAAKLKEKYEKDVAAYRAK 164
>gi|297798364|ref|XP_002867066.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312902|gb|EFH43325.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 125
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 69/108 (63%), Gaps = 5/108 (4%)
Query: 17 LKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKE 76
+K N +V R D K +G + K KDPNKPK+PPS FFVFL++FR+ F
Sbjct: 1 MKDNQTEVESRST-----DDRLKVRGNKGGKKTKDPNKPKKPPSPFFVFLDDFRREFNLA 55
Query: 77 NPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYN 124
NP+ +V++VGKAAG KWKSM+ +KAP+ +KA+ K+EY M YN
Sbjct: 56 NPDNKSVASVGKAAGKKWKSMTEEDKAPFVAKAKSKKTEYAATMQQYN 103
>gi|45360483|ref|NP_988904.1| high mobility group box 2 [Xenopus (Silurana) tropicalis]
gi|38181929|gb|AAH61601.1| high-mobility group box 2 [Xenopus (Silurana) tropicalis]
Length = 212
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R K E+P ++ + K G W +P +K PYE KA
Sbjct: 92 DPNAPKRPPSAFFLFCSEHRPQIKSESPGLS-IGDTAKKLGEMWSEQTPKDKLPYEQKAA 150
Query: 111 KLKSEYGKKMNAYNKKQDGD 130
KLK +Y K + AY K D
Sbjct: 151 KLKEKYEKDVAAYKAKGKSD 170
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEE 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 MAKNDKVRYEREMKTY 78
>gi|229367846|gb|ACQ58903.1| High mobility group protein B2 [Anoplopoma fimbria]
Length = 213
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFFVF + R K+ENP ++ + + K G W + + +K PYE++A
Sbjct: 92 DPNAPKRPPSAFFVFCSDHRPRIKEENPGIS-IGDIAKKLGEFWSTQTSKDKVPYEARAG 150
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + AY K
Sbjct: 151 KLKEKYEKDVAAYKAK 166
Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESK 108
KDPNKP+ S++ F+ R+ KK++P V+ A K +WK+MS EK +E
Sbjct: 3 KDPNKPRGKTSSYAFFVATCREEHKKKHPGVSVGFAEFSKKCSERWKTMSAKEKVKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 AKNDKVRYEREMKTY 77
>gi|49258307|pdb|1J3D|A Chain A, Solution Structure Of The C-Terminal Domain Of The Hmgb2
Length = 78
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE K
Sbjct: 2 KKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQK 60
Query: 109 AEKLKSEYGKKMNAYNKK 126
A KLK +Y K + AY K
Sbjct: 61 AAKLKEKYEKDIAAYRAK 78
>gi|410256410|gb|JAA16172.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W +++ +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKKQDGDEA 132
KLK +Y K + Y K D A
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|349802605|gb|AEQ16775.1| putative high mobility group box 3 [Pipa carvalhoi]
Length = 149
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W +++ EK PY +KA
Sbjct: 64 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLNEGEKQPYNNKAA 122
Query: 111 KLKSEYGKKMNAYNKKQDGDEA 132
KLK +Y K + Y K D A
Sbjct: 123 KLKEKYEKDVADYKSKGKFDCA 144
>gi|296200444|ref|XP_002747606.1| PREDICTED: high mobility group protein B1-like isoform 2
[Callithrix jacchus]
Length = 210
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDP+ PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPSAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKASKLKEKYEKDIAAYQAKGKPDAA 171
>gi|395754558|ref|XP_002832281.2| PREDICTED: high mobility group protein B3 isoform 2 [Pongo abelii]
Length = 199
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W +++ +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKKQDGDEA 132
KLK +Y K + Y K D A
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|355705241|gb|EHH31166.1| hypothetical protein EGK_21042 [Macaca mulatta]
Length = 200
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W +++ +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKLKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKKQDGDEA 132
KLK +Y K + Y K D A
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|2285963|emb|CAA71143.1| high mobility group protein 2a [Homo sapiens]
Length = 200
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W +++ +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKKQDGDEA 132
KLK +Y K + Y K D A
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|429860623|gb|ELA35353.1| nucleosome binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 103
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 42 GKREKK-AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
GK EKK KKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK+++
Sbjct: 12 GKVEKKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKILGERWKALNDK 70
Query: 101 EKAPYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
++APYE+KA K Y + AYN Q+ DE+S
Sbjct: 71 QRAPYEAKAAADKKRYEDEKQAYNADQEEDESS 103
>gi|52345682|ref|NP_001004888.1| high mobility group box 3 [Xenopus (Silurana) tropicalis]
gi|49522962|gb|AAH75290.1| MGC88931 protein [Xenopus (Silurana) tropicalis]
gi|89267024|emb|CAJ81774.1| high-mobility group box 3 [Xenopus (Silurana) tropicalis]
Length = 202
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W +++ EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLNDGEKQPYNNKAA 147
Query: 111 KLKSEYGKKMNAYNKKQDGDEA 132
KLK +Y K + Y K D A
Sbjct: 148 KLKEKYEKDVADYKSKGKFDCA 169
>gi|293333310|ref|NP_001168929.1| uncharacterized protein LOC100382741 [Zea mays]
gi|223973791|gb|ACN31083.1| unknown [Zea mays]
Length = 204
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 41/56 (73%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KPKRPPSAFFVF+ EFR+ ++ +P +V+ V KAAG KW++MS EK PY +A
Sbjct: 32 KPKRPPSAFFVFMSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQA 87
>gi|432895946|ref|XP_004076239.1| PREDICTED: high mobility group-T protein-like [Oryzias latipes]
Length = 206
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN PKRPPSAFF+F EFR K E+P +T + V K G W S S +K PYE KA
Sbjct: 89 KDPNAPKRPPSAFFIFCSEFRPKVKGESPGLT-IGDVAKRLGEMWNSTSAEDKQPYEKKA 147
Query: 110 EKLKSEYGKKMNAYNKK-QDGDEASDKSKSEV 140
KLK +YGK + AY K + G A K+ ++V
Sbjct: 148 AKLKEKYGKDIAAYRAKGKTGGGAPAKAPAKV 179
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P+ + A K +WK+MS EK +E
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A + K Y ++M +Y
Sbjct: 63 ARQDKVRYDREMMSY 77
>gi|46105649|ref|XP_380561.1| hypothetical protein FG00385.1 [Gibberella zeae PH-1]
gi|110287687|sp|Q4IQX3.1|NHP6_GIBZE RecName: Full=Non-histone chromosomal protein 6
gi|408400690|gb|EKJ79767.1| hypothetical protein FPSE_00047 [Fusarium pseudograminearum CS3096]
Length = 101
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+AKKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK+++ ++APY
Sbjct: 15 KRAKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKLLGERWKALNEKQRAPY 73
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
E+KA K Y + AYN Q+ +E+S
Sbjct: 74 EAKAAADKKRYEDEKQAYNADQEEEESS 101
>gi|332254661|ref|XP_003276450.1| PREDICTED: high mobility group protein B4 [Nomascus leucogenys]
Length = 189
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR+K+ K+DP P+RPPS+F +F ++ K+ENPN + V V KA G W + + E
Sbjct: 80 GKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVVQ-VAKATGEMWSTTTDLE 138
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKSK 137
K PYE +A L+++Y +++ Y K+ A K +
Sbjct: 139 KHPYEQRAALLRAKYFEELELYRKQHKQCNARKKYR 174
Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R TFK++ PN + +W+S+S EKA YE+ A+
Sbjct: 8 KPKANVSSYVHFLLNYRNTFKEQQPNTYVGFKEFSRKCSEEWRSISKHEKAKYEALAKVD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|223942599|gb|ACN25383.1| unknown [Zea mays]
gi|414881085|tpg|DAA58216.1| TPA: hypothetical protein ZEAMMB73_949955 [Zea mays]
Length = 118
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%)
Query: 27 RKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAV 86
+ A A S +KR+ + + K DP PK+PP+AFF F+E+FRK +K+E P+V ++ +
Sbjct: 13 KTVAMAPRPSSTKRKPRPKPAGKGDPRAPKKPPTAFFYFMEDFRKIYKQEKPSVKSMQEI 72
Query: 87 GKAAGGKWKSMS 98
GKA G KW +M+
Sbjct: 73 GKACGEKWNTMT 84
>gi|449500530|ref|XP_002187513.2| PREDICTED: high mobility group protein B2 [Taeniopygia guttata]
Length = 145
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA
Sbjct: 40 DPNAPKRPPSAFFLFCSEHRPKIKNEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAA 98
Query: 111 KLKSEYGKKMNAYNKKQDGD 130
KLK +Y K + AY K D
Sbjct: 99 KLKEKYEKDIAAYRAKSKSD 118
>gi|395857899|ref|XP_003801318.1| PREDICTED: high mobility group protein B4 [Otolemur garnettii]
Length = 187
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 64/106 (60%), Gaps = 7/106 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ KKDP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 62 ALAKLDKARYQEEMMHYDGKRKKRRKKDPQAPRRPPSSFLLFCKDHYAQLKRENPNWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDG 129
V KA+G W + AEK PYE +A L+++Y +++ Y ++ +
Sbjct: 122 Q-VAKASGKMWSLSTNAEKQPYEERAALLRAKYQEELQIYRRQCNA 166
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
+PK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 8 RPKVNVSSYIHFLLNYRNKFKEQQPNTYVGFKDFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMHY 78
>gi|205539816|sp|P0C6E5.1|HG3BL_HUMAN RecName: Full=Putative high mobility group protein B3-like protein
Length = 187
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 6/98 (6%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + GK KKDPN PKRPPS FF+F EF K NP + + V K G W
Sbjct: 77 DYGPAKGGK-----KKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIP-IGDVAKKLGEMW 130
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
K+++ +EK PY ++A KLK +Y K + Y K D A
Sbjct: 131 KNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGA 168
>gi|358410870|ref|XP_003581858.1| PREDICTED: high mobility group protein B3-like [Bos taurus]
Length = 197
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGIS-IGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 111 KLKSEYGKKMNAYNKKQDGDEA 132
KL +Y K + Y K D A
Sbjct: 148 KLXEKYEKDVADYKSKGKFDGA 169
>gi|70999478|ref|XP_754458.1| nucleosome binding protein (Nhp6a) [Aspergillus fumigatus Af293]
gi|74674416|sp|Q4WY33.1|NHP6_ASPFU RecName: Full=Non-histone chromosomal protein 6
gi|66852095|gb|EAL92420.1| nucleosome binding protein (Nhp6a), putative [Aspergillus fumigatus
Af293]
gi|159127475|gb|EDP52590.1| nucleosome binding protein (Nhp6a), putative [Aspergillus fumigatus
A1163]
Length = 104
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
+ ++ + KR ++ KKDPN PKR SA+ F E R ++ENP ++ VGK G +WK
Sbjct: 6 TSTRTKTKRVERKKKDPNAPKRGLSAYMFFANENRDKVREENPGIS-FGQVGKMLGERWK 64
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDE 131
++S +E+ PYE KA K Y + +YN QD DE
Sbjct: 65 ALSDSERRPYEEKAAADKKRYEDEKASYNAAQDEDE 100
>gi|334323271|ref|XP_003340370.1| PREDICTED: high mobility group protein B1-like [Monodelphis
domestica]
Length = 216
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA LK +Y K + AY K
Sbjct: 145 EKKAAILKEKYEKDIAAYRTK 165
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK ++
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFQ 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 DMAKADKVHYEREMKTY 78
>gi|395844161|ref|XP_003794831.1| PREDICTED: uncharacterized protein LOC100953571 [Otolemur
garnettii]
Length = 357
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PK PPS FF+F EFR K NP ++ + V K G W S+S +EK PY +K
Sbjct: 253 KKDPNAPKTPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNSLSDSEKQPYITK 311
Query: 109 AEKLK 113
A +LK
Sbjct: 312 AAQLK 316
>gi|67968790|dbj|BAE00752.1| unnamed protein product [Macaca fascicularis]
Length = 191
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 7/114 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ K+DP P+RPPS+F +F ++ K+ENP+ + V
Sbjct: 64 ALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPSWSVV 123
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKSK 137
V KA G W + + EK PYE +A L+++Y +++ Y K+Q A + +
Sbjct: 124 Q-VAKATGKMWSATADLEKHPYEQRAALLRAKYFEELELYRKQQKQCNARKRYR 176
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 10 KPKANVSSYIHFLLNYRNEFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 69
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 70 KARYQEEMMNY 80
>gi|342874398|gb|EGU76412.1| hypothetical protein FOXB_13090 [Fusarium oxysporum Fo5176]
Length = 102
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 33 KLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGG 92
K +G + + ++ K+ KKDPN PKR SA+ F E R+ ++ENP ++ VGK G
Sbjct: 3 KAAAGKRGKAEKTKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKLLGE 61
Query: 93 KWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
+WK+++ ++APYE+KA K Y + AYN Q+ +E+S
Sbjct: 62 RWKALNEKQRAPYEAKAAADKKRYEDEKQAYNADQEEEESS 102
>gi|291399740|ref|XP_002716281.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 243
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGD 130
E KA KLK +Y K AY K D
Sbjct: 145 ERKAAKLKGKYEKDTAAYRAKGKLD 169
>gi|119187239|ref|XP_001244226.1| hypothetical protein CIMG_03667 [Coccidioides immitis RS]
gi|303317166|ref|XP_003068585.1| Nonhistone chromosomal protein 6B, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108266|gb|EER26440.1| Nonhistone chromosomal protein 6B, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320038503|gb|EFW20438.1| nucleosome binding protein Nhp6a [Coccidioides posadasii str.
Silveira]
gi|392870942|gb|EAS32789.2| non-histone chromosomal protein 6 [Coccidioides immitis RS]
Length = 102
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
S + +G+R +K KKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK
Sbjct: 6 STRQTKGRRAEKKKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKLLGERWK 64
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
++S ++APYE KA K Y + YN +D +E++
Sbjct: 65 ALSDKQRAPYEEKAAADKKRYEDEKANYNAHEDDEESA 102
>gi|342319487|gb|EGU11435.1| Non-histone chromosomal protein [Rhodotorula glutinis ATCC 204091]
Length = 142
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVT------AVSAVGKAAGGKWKSMSPA 100
+AKKDPN PKRP SA+ F ++ R K+ENP+VT ++ +GK G KWK +
Sbjct: 17 RAKKDPNAPKRPLSAYMHFSQDQRSVVKEENPDVTFVGHCESIGEIGKILGAKWKELPED 76
Query: 101 EKAPYESKAEKLKSEYGKKMNAYN 124
E+ PYE KA KS Y K+ AY+
Sbjct: 77 ERKPYEEKASADKSRYEKEKAAYD 100
>gi|57232750|ref|NP_660206.2| high mobility group protein B4 [Homo sapiens]
gi|387912835|sp|Q8WW32.2|HMGB4_HUMAN RecName: Full=High mobility group protein B4
gi|189065201|dbj|BAG34924.1| unnamed protein product [Homo sapiens]
gi|208968483|dbj|BAG74080.1| high-mobility group box 4 [synthetic construct]
Length = 186
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 63/106 (59%), Gaps = 7/106 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ K+DP +P+RPPS+F +F ++ K+ENPN + V
Sbjct: 62 ALAKLDKARYQEEMMNYVGKRKKRRKRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDG 129
V KA G W + + EK PYE + L+++Y +++ Y K+ +
Sbjct: 122 Q-VAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELYRKQCNA 166
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|401885246|gb|EJT49369.1| nonhistone protein 6 [Trichosporon asahii var. asahii CBS 2479]
gi|406694772|gb|EKC98094.1| nonhistone protein 6 [Trichosporon asahii var. asahii CBS 8904]
Length = 108
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+ KKDPNKPKR SA+ F++++R+ K ENP+ +VG+ G KW+ MS +EK PY
Sbjct: 14 KRGKKDPNKPKRALSAYMFFVQDWRERIKSENPDAD-FGSVGRLLGAKWQEMSASEKKPY 72
Query: 106 ESKAE 110
E KA+
Sbjct: 73 EDKAQ 77
>gi|444730168|gb|ELW70558.1| High mobility group protein B3 [Tupaia chinensis]
Length = 369
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRP S FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPLSGFFLFSSEFRPKIKSTNPGIS-IGDVAKKLGDMWNNLSDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKKQDGDEA 132
KLK +Y K + Y K D A
Sbjct: 148 KLKEKYEKDVANYKSKGKSDGA 169
>gi|344245608|gb|EGW01712.1| High mobility group protein B1 [Cricetulus griseus]
Length = 162
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+ K E P ++ + K G W S + +K PY
Sbjct: 35 KKKFKDPNAPKRPPSAFFLFCSEYHPKIKGERPGLS-IGDAAKKLGETWNSTAAEDKQPY 93
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E+KA KLK +Y K + Y K D A
Sbjct: 94 ETKAAKLKEQYEKDIADYRAKGKPDAA 120
>gi|242080163|ref|XP_002444850.1| hypothetical protein SORBIDRAFT_07g000230 [Sorghum bicolor]
gi|241941200|gb|EES14345.1| hypothetical protein SORBIDRAFT_07g000230 [Sorghum bicolor]
Length = 221
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
K KR P+AFF+F+++FRK FK +P+ +V+ V K G KWKSM+ EK PY KA +LK
Sbjct: 96 KRKRSPTAFFLFMDDFRKEFKAAHPDNKSVATVAKEGGEKWKSMTDEEKKPYVEKAAELK 155
Query: 114 SE 115
++
Sbjct: 156 AQ 157
>gi|426328852|ref|XP_004065350.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B4
[Gorilla gorilla gorilla]
Length = 186
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 62 ALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDG 129
V KA G W + + EK PYE + L+++Y +++ Y K+ +
Sbjct: 122 Q-VAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELYRKQCNA 166
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|302926833|ref|XP_003054372.1| HMG box-containing protein [Nectria haematococca mpVI 77-13-4]
gi|256735313|gb|EEU48659.1| HMG box-containing protein [Nectria haematococca mpVI 77-13-4]
Length = 101
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
Query: 33 KLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGG 92
K D+G KR +K+ KKDPN PKR SA+ F E R+ ++ENP ++ VGK G
Sbjct: 3 KADAG-KRGKAVKKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKLLGE 60
Query: 93 KWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
+WK+++ ++APYE+KA K Y + AYN Q+ +E+S
Sbjct: 61 RWKALNEKQRAPYEAKAAADKKRYEDEKQAYNADQEEEESS 101
>gi|18088957|gb|AAH21180.1| High-mobility group box 4 [Homo sapiens]
gi|312150396|gb|ADQ31710.1| high-mobility group box 4 [synthetic construct]
Length = 186
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 62 ALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDG 129
V KA G W + + EK PYE + L+++Y +++ Y K+ +
Sbjct: 122 Q-VAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELYRKQCNA 166
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ P+ + KW+S+S EKA YE+ A+
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPSTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|110808604|gb|ABB22048.1| HMBG4 [Homo sapiens]
gi|119627858|gb|EAX07453.1| high-mobility group box 4 [Homo sapiens]
Length = 186
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 62 ALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDG 129
V KA G W + + EK PYE + L+++Y +++ Y K+ +
Sbjct: 122 Q-VAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELYRKQCNA 166
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|58268918|ref|XP_571615.1| nonhistone protein 6 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112618|ref|XP_774852.1| hypothetical protein CNBF0170 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818300|sp|P0CO25.1|NHP6_CRYNB RecName: Full=Non-histone chromosomal protein 6
gi|338818301|sp|P0CO24.1|NHP6_CRYNJ RecName: Full=Non-histone chromosomal protein 6
gi|50257500|gb|EAL20205.1| hypothetical protein CNBF0170 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227850|gb|AAW44308.1| nonhistone protein 6, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 116
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+ KKDPNKPKR SA+ F++++R+ K ENP T VGK G KW+ M+ EK PY
Sbjct: 19 KRTKKDPNKPKRALSAYMFFVQDYRERIKTENPEAT-FGDVGKLLGIKWREMNENEKKPY 77
Query: 106 ESKA 109
E+KA
Sbjct: 78 EAKA 81
>gi|79324303|ref|NP_001031480.1| high mobility group (HMG1/2) domain-containing protein [Arabidopsis
thaliana]
gi|330253882|gb|AEC08976.1| high mobility group (HMG1/2) domain-containing protein [Arabidopsis
thaliana]
Length = 152
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 55 PKRPPSAFFVFLEEFRKTFKKENPNVTAVS-AVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
PK+P +AFF FL++FRK +++ENP+V ++ +GK G KWK+M+ EK Y A + +
Sbjct: 63 PKKPATAFFFFLDDFRKQYQEENPDVKSMREVIGKTCGEKWKTMTYEEKVKYYDIATEKR 122
Query: 114 SEYGKKMNAYNKKQD 128
E+ + M Y K+ +
Sbjct: 123 EEFHRAMTEYTKRME 137
>gi|225703820|gb|ACO07756.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 193
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
++KK KDPN KRPPSAFF+F +FR K E+P ++ + K G W S + EK
Sbjct: 83 QKKKRFKDPNALKRPPSAFFIFCADFRAKIKSEHPGLS-IGDTAKKLGVMWNSSAAEEKK 141
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
PYE KA LK +Y K + +Y D AS
Sbjct: 142 PYEKKAATLKEKYDKDIASYRTNGRVDTAS 171
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R KK+ P + A K +WK MSP EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKQPEASVNFAEFSKKCSERWKPMSPKEKGTFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y ++M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|148673204|gb|EDL05151.1| mCG5336 [Mus musculus]
Length = 216
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAVYDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
KA KLK +Y K + AY K
Sbjct: 145 GKKAAKLKEKYEKDIAAYRAK 165
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|164422576|ref|XP_957906.2| hypothetical protein NCU09995 [Neurospora crassa OR74A]
gi|157069727|gb|EAA28670.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 95
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 38 SKRQGKREKK-AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
SK GK EK+ AKKDPN PKR SA+ F E R+ ++ENP V+ VGK G +WK+
Sbjct: 8 SKTTGKVEKRRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVS-FGQVGKILGERWKA 66
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYN 124
+S ++APYE+KA K Y + AYN
Sbjct: 67 LSDKQRAPYEAKAAADKKRYEDEKQAYN 94
>gi|431920081|gb|ELK18129.1| High mobility group protein B3 [Pteropus alecto]
Length = 255
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 129 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 183
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S +EK PY +KA KLK +Y K + Y K D A
Sbjct: 184 NNLSDSEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGA 221
>gi|401626897|gb|EJS44815.1| nhp6bp [Saccharomyces arboricola H-6]
Length = 99
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDPN PKR SA+ F E R + ENP+VT VG+ G +WK+++ EK
Sbjct: 15 KRTTRRKKDPNAPKRGLSAYMFFANETRDIVRSENPDVT-FGQVGRILGERWKALTAEEK 73
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PYESKA+ K Y + YN
Sbjct: 74 VPYESKAQADKKRYESEKELYN 95
>gi|326918606|ref|XP_003205579.1| PREDICTED: high mobility group protein B2-like [Meleagris
gallopavo]
Length = 246
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R K ++P ++ + K G W S +K PYE KA
Sbjct: 129 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAA 187
Query: 111 KLKSEYGKKMNAYNKKQDGD 130
KLK +Y K + AY K D
Sbjct: 188 KLKEKYEKDIAAYRAKSKSD 207
>gi|109001746|ref|XP_001107984.1| PREDICTED: high mobility group protein B4-like [Macaca mulatta]
gi|67968844|dbj|BAE00779.1| unnamed protein product [Macaca fascicularis]
Length = 191
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 7/114 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ K+DP P+RPPS+F +F ++ K+ENP+ + V
Sbjct: 64 ALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPSWSVV 123
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKSK 137
V KA G W + + EK PYE +A L+++Y +++ Y K++ A K +
Sbjct: 124 Q-VAKATGKMWSATTDLEKHPYEQRAALLRAKYFEELELYRKQRKQCNARKKYR 176
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 10 KPKANVSSYIHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 69
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 70 KARYQEEMMNY 80
>gi|405121060|gb|AFR95829.1| nonhistone protein 6 [Cryptococcus neoformans var. grubii H99]
Length = 116
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+ KKDPNKPKR SA+ F++++R+ K ENP T VGK G KW+ M+ EK PY
Sbjct: 19 KRTKKDPNKPKRALSAYMFFVQDYRERIKAENPEAT-FGDVGKLLGIKWREMNENEKKPY 77
Query: 106 ESKA 109
E+KA
Sbjct: 78 EAKA 81
>gi|261194046|ref|XP_002623428.1| nucleosome binding protein [Ajellomyces dermatitidis SLH14081]
gi|239588442|gb|EEQ71085.1| nucleosome binding protein [Ajellomyces dermatitidis SLH14081]
gi|327354542|gb|EGE83399.1| nonhistone chromosomal protein 6A [Ajellomyces dermatitidis ATCC
18188]
Length = 101
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R +K KKDPN PKR SA+ F E R ++ENP ++ VGK G +WK+++ ++A
Sbjct: 13 RGEKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGIS-FGQVGKVLGERWKALNEKQRA 71
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
PYE+KA K Y + +YN + D DE+S
Sbjct: 72 PYEAKAAADKKRYEDEKASYNAQDDDDESS 101
>gi|358391632|gb|EHK41036.1| hypothetical protein TRIATDRAFT_259074 [Trichoderma atroviride IMI
206040]
Length = 101
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+AKKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK+++ ++APY
Sbjct: 16 KRAKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKLLGERWKALNDKQRAPY 74
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
E+KA K Y + AYN Q+ DE+S
Sbjct: 75 EAKAAADKKRYEDEKQAYNADQE-DESS 101
>gi|392337480|ref|XP_003753270.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392343959|ref|XP_003748829.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 215
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWTNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
A KLK +Y K + AY K D A
Sbjct: 145 GKMAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKCED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|119491564|ref|XP_001263303.1| nucleosome binding protein (Nhp6a), putative [Neosartorya fischeri
NRRL 181]
gi|119411463|gb|EAW21406.1| nucleosome binding protein (Nhp6a), putative [Neosartorya fischeri
NRRL 181]
Length = 104
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
+ ++ + KR ++ KKDPN PKR SA+ F E R ++ENP ++ VGK G +WK
Sbjct: 6 TSTRTKTKRVERKKKDPNAPKRGLSAYMFFANENRDKVREENPGIS-FGQVGKMLGERWK 64
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDE 131
++S ++ PYE KA K Y + +YN QD DE
Sbjct: 65 ALSDTDRRPYEEKAAADKKRYEDEKASYNAAQDEDE 100
>gi|162462896|ref|NP_001105076.1| nucleosome/chromatin assembly factor D [Zea mays]
gi|17017396|gb|AAL33652.1|AF440223_1 HMG type nucleosome/chromatin assembly factor D [Zea mays]
gi|22135475|gb|AAM93218.1|AF527617_1 nucleasome/chromatin assembly factor D protein NFD106 [Zea mays]
Length = 154
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
K KR P+AFF+F+++FRK FK +P+ +V+ V K G +WKSM+ EK PY KA +LK
Sbjct: 33 KRKRSPTAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERWKSMTDEEKKPYIEKAAELK 92
Query: 114 SE 115
+E
Sbjct: 93 AE 94
>gi|195618458|gb|ACG31059.1| HMG1/2-like protein [Zea mays]
gi|195640852|gb|ACG39894.1| HMG1/2-like protein [Zea mays]
gi|223975443|gb|ACN31909.1| unknown [Zea mays]
gi|413925109|gb|AFW65041.1| HMG type nucleosome/chromatin assembly factor DNucleasome/chromatin
assembly factor D protein NFD106 [Zea mays]
Length = 212
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
K KR P+AFF+F+++FRK FK +P+ +V+ V K G +WKSM+ EK PY KA +LK
Sbjct: 91 KRKRSPTAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERWKSMTDEEKKPYIEKAAELK 150
Query: 114 SE 115
+E
Sbjct: 151 AE 152
>gi|213982973|ref|NP_001135648.1| uncharacterized protein LOC100216207 [Xenopus (Silurana)
tropicalis]
gi|156914901|gb|AAI52619.1| Hmgb2 protein [Danio rerio]
gi|197245630|gb|AAI68534.1| Unknown (protein for MGC:181066) [Xenopus (Silurana) tropicalis]
Length = 214
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 49 KKDPNKPKRPPSAFF-VFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYES 107
KKDPN PKRPPSAFF F E+R T K E+PN+T + + K G W S ++AP+E
Sbjct: 91 KKDPNAPKRPPSAFFV-FCSEYRPTVKSEHPNLT-IGEIAKKLGELWSKQSSKDRAPFEQ 148
Query: 108 KAEKLKSEYGKKMNAY 123
KA KL+ +Y K++ AY
Sbjct: 149 KAGKLREKYEKEVAAY 164
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K D NKPK SA+ F++ R K++ P+V S K +WKS++ ++K +E
Sbjct: 2 VKGDVNKPKGKTSAYAFFVQTCRDEHKRKGPDVPVNFSEFSKKCSERWKSLNASDKVKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 DMAKADKVRYDREMKTY 78
>gi|291415754|ref|XP_002724114.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA
Sbjct: 115 DPNAPKRPPSAFFLFCSEHRPEIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAA 173
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDKSKSEV 140
KLK +Y K + AY DK KSE
Sbjct: 174 KLKEKYEKDIAAY---------CDKGKSEA 194
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E+
Sbjct: 27 KGDPNKPRDKMSSYAFFVQMCREEHKKKHPDSSINFAEFSKKCSERWKTMSAKEKSKFEN 86
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 87 MAKSDKARYDREMKNY 102
>gi|255537735|ref|XP_002509934.1| transcription factor, putative [Ricinus communis]
gi|223549833|gb|EEF51321.1| transcription factor, putative [Ricinus communis]
Length = 514
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPK+P SAFF+F E R + EN NV V K AG +WK+M+ +K PYE A+
Sbjct: 307 DPLKPKQPMSAFFLFSNERRASLLAENKNV---REVAKIAGEQWKNMTEEQKGPYEEMAK 363
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDKSKSE 139
+ K Y ++M AY +K+D +EA + K E
Sbjct: 364 RNKLRYMQEMEAYKQKKD-EEAMNLKKEE 391
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 14 QEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTF 73
QEAL+ + K+K T + +K +++K+ DPNKPK+P S+F +F +E RK
Sbjct: 400 QEALQ-----LLKKKEKTDNMIKKTKENRQKKKQQNVDPNKPKKPASSFLIFSKEARKNL 454
Query: 74 KKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+E P V S + KWK +S E+ + +KA + Y K+M YNK
Sbjct: 455 AQERP-VINNSTLNALISVKWKELSEEERQIWNAKAAEAMEIYKKEMEEYNK 505
>gi|366988547|ref|XP_003674040.1| hypothetical protein NCAS_0A11010 [Naumovozyma castellii CBS 4309]
gi|342299903|emb|CCC67659.1| hypothetical protein NCAS_0A11010 [Naumovozyma castellii CBS 4309]
Length = 101
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
+R ++ KKDPN PKR SA+ F E R K ENPN+T VGK G KWK+++ EK
Sbjct: 8 RRTQRRKKDPNAPKRGLSAYMFFANENRDIVKAENPNIT-FGQVGKVLGEKWKALTAEEK 66
Query: 103 APYESKAEKLKSEY 116
PYE+KA+ K Y
Sbjct: 67 EPYEAKAKADKKRY 80
>gi|52219178|ref|NP_001004674.1| high-mobility group box 2b [Danio rerio]
gi|51858850|gb|AAH81415.1| High-mobility group box 2 [Danio rerio]
gi|182889482|gb|AAI65150.1| Hmgb2 protein [Danio rerio]
Length = 214
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 49 KKDPNKPKRPPSAFF-VFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYES 107
KKDPN PKRPPSAFF F E+R T K E+PN+T + + K G W S ++AP+E
Sbjct: 91 KKDPNAPKRPPSAFFV-FCSEYRPTVKSEHPNLT-IGEIAKKLGELWSKQSSKDRAPFEQ 148
Query: 108 KAEKLKSEYGKKMNAY 123
KA KL+ +Y K++ AY
Sbjct: 149 KAGKLREKYEKEVAAY 164
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K D NKPK SA+ F++ R K+++P+V S K +WKS++ ++K +E
Sbjct: 2 VKGDVNKPKGKTSAYAFFVQTCRDEHKRKSPDVPVNFSEFSKKCSERWKSLNASDKVKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 DMAKADKVRYDREMKTY 78
>gi|358337037|dbj|GAA55457.1| structure-specific recognition protein 1 [Clonorchis sinensis]
Length = 723
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN P RPP+A+ ++ E R K N T+V+ V KAAG +W+++ KA Y
Sbjct: 570 KKRVKDPNAPSRPPTAYIMWFNEHRDEISKSIGNPTSVAEVAKAAGERWRNIDSETKAKY 629
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEASDKSKSEVN 141
+++ ++LK Y +M Y K E S S+V
Sbjct: 630 QARVDELKKNYESEMRIYRNKIASGELVAPSTSKVT 665
>gi|410955200|ref|XP_003984245.1| PREDICTED: high mobility group protein B2-like [Felis catus]
Length = 329
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P + + + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-PIGDIAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +YGK + AY K
Sbjct: 152 KEKYGKDIAAYRTK 165
Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYE 106
K DP+KP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 2 GKGDPSKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSEKEKSKFE 61
Query: 107 SKAEKLKSEYGKKM 120
A+ K+ Y ++M
Sbjct: 62 DMAKSDKARYDREM 75
>gi|47124491|gb|AAH70148.1| High-mobility group box 4 [Homo sapiens]
Length = 112
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR+K+ K+DP P+RPPS+F +F ++ K+ENPN + V V KA G W + + E
Sbjct: 6 GKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVVQ-VAKATGKMWSTATDLE 64
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKKQDG 129
K PYE + L+++Y +++ Y K+ +
Sbjct: 65 KHPYEQRVALLRAKYFEELELYRKQCNA 92
>gi|315051466|ref|XP_003175107.1| non-histone chromosomal protein 6 [Arthroderma gypseum CBS 118893]
gi|311340422|gb|EFQ99624.1| non-histone chromosomal protein 6 [Arthroderma gypseum CBS 118893]
Length = 102
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKR SA+ +F E R + ++ENP++T VGK G +WK+++ ++ PYE
Sbjct: 17 KKKKDPNAPKRGLSAYMIFANEQRASVREENPSIT-FGQVGKVLGERWKALTDKQRKPYE 75
Query: 107 SKAEKLKSEYGKKMNAYNKKQDGDEAS 133
KA K Y + AYN + + +E+S
Sbjct: 76 EKAATDKQRYEDEKAAYNSRLEEEESS 102
>gi|347921933|ref|NP_990626.2| high mobility group protein B3 [Gallus gallus]
Length = 217
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPSAFF+F EFR K NP ++ + V K G W
Sbjct: 92 DYGPAKG----GKKKKDPNAPKRPPSAFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 146
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGD 130
++S EK PY +KA KLK +Y K + Y K D
Sbjct: 147 NNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFD 182
>gi|156837652|ref|XP_001642846.1| hypothetical protein Kpol_376p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156113421|gb|EDO14988.1| hypothetical protein Kpol_376p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 93
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDPN PKR SA+ F E R + ENP+V+ VG+ G KWK+++P +K
Sbjct: 9 KRTTRRKKDPNAPKRALSAYMFFANETRDIVRAENPDVS-FGQVGRILGEKWKALTPEDK 67
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
P+E+KAE K Y + YN
Sbjct: 68 VPFEAKAEADKKRYESEKELYN 89
>gi|349576469|dbj|GAA21640.1| K7_Nhp6bp [Saccharomyces cerevisiae Kyokai no. 7]
Length = 99
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDPN PKR SA+ F E R + ENP+VT VG+ G KWK+++ EK
Sbjct: 15 KRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVT-FGQVGRILGEKWKALTAEEK 73
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PYESKA+ K Y + YN
Sbjct: 74 QPYESKAQADKKRYESEKELYN 95
>gi|402853838|ref|XP_003891595.1| PREDICTED: high mobility group protein B4 [Papio anubis]
Length = 191
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 7/114 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ K+DP P+RPPS+F +F ++ K+ENP+ + V
Sbjct: 64 ALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPSWSVV 123
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKSK 137
V KA G W + + EK PYE +A L+++Y +++ Y K++ A K +
Sbjct: 124 Q-VAKATGKMWSATTDLEKHPYEQRAALLRAKYFEELERYRKQRKQCNARKKYR 176
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 10 KPKANVSSYIHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 69
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 70 KARYQEEMMNY 80
>gi|729728|sp|P40618.2|HMGB3_CHICK RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|63494|emb|CAA45065.1| HMG2a [Gallus gallus]
Length = 202
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPSAFF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSAFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGD 130
++S EK PY +KA KLK +Y K + Y K D
Sbjct: 132 NNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFD 167
>gi|47190944|emb|CAF93003.1| unnamed protein product [Tetraodon nigroviridis]
Length = 204
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
Query: 42 GKREKKAKKDPNKPKRPPSAFF-VFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
GKR +K +KDPN PKRPPSAFF F E+R + K++ P ++ + K G W +S +
Sbjct: 88 GKRGRK-RKDPNAPKRPPSAFFV-FCSEYRPSVKQQFPGLS-IGDCAKKLGEMWSKLSQS 144
Query: 101 EKAPYESKAEKLKSEYGKKMNAY 123
EK PYE KA+KL+ +Y + M AY
Sbjct: 145 EKQPYEEKAQKLREKYDRDMVAY 167
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
+KD NKPK SA+ F++ R+ +K+NP + A K +WK++S +K +E
Sbjct: 6 RKDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSAGDKKCFED 65
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 66 MAKADKVRYNREMRDY 81
>gi|224080027|ref|XP_002305996.1| high mobility group family [Populus trichocarpa]
gi|222848960|gb|EEE86507.1| high mobility group family [Populus trichocarpa]
Length = 165
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%)
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
P+AFF FLE+FRK F+++NP+V ++ VGKA G KWK+M+ EK Y A + ++E+ +
Sbjct: 81 PTAFFYFLEDFRKEFQEQNPDVKSMREVGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 140
Query: 119 KMNAYNKKQDGDEASD 134
+ Y K+++ E D
Sbjct: 141 ATSEYIKRKESGEDED 156
>gi|225681708|gb|EEH19992.1| nucleosome binding protein [Paracoccidioides brasiliensis Pb03]
Length = 103
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKR SA+ F E R ++ENP ++ VGK G +WK+++ ++APYE
Sbjct: 18 KKKKDPNAPKRGLSAYMFFANEQRDNVREENPGIS-FGQVGKVLGERWKALNEKQRAPYE 76
Query: 107 SKAEKLKSEYGKKMNAYNKKQDGDEAS 133
+KA K Y + +YN +D DE+S
Sbjct: 77 AKAAADKKRYEDEKASYNAHEDEDESS 103
>gi|291392907|ref|XP_002712835.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 208
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+ K E+P ++ + V K G W + + +K P
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYCPKIKGEHPGLS-IGDVAKKLGEMWNNTAAGDKQPC 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 ERKAAKLKVKYEKGIAAYQAKGKPDAA 171
>gi|295671102|ref|XP_002796098.1| nucleosome binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284231|gb|EEH39797.1| nucleosome binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 103
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKR SA+ F E R ++ENP ++ VGK G +WK+++ ++APYE
Sbjct: 18 KKKKDPNAPKRGLSAYMFFANEQRDNVREENPGIS-FGQVGKVLGERWKALNEKQRAPYE 76
Query: 107 SKAEKLKSEYGKKMNAYNKKQDGDEAS 133
+KA K Y + +YN +D DE+S
Sbjct: 77 AKAAADKKRYEDEKASYNAHEDEDESS 103
>gi|1870104|emb|CAA85042.1| NHP6B [Saccharomyces cerevisiae]
Length = 99
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDPN PKR SA+ F E R + ENP+VT VG+ G +WK+++ EK
Sbjct: 15 KRTTRRKKDPNAPKRRLSAYMFFANENRDIVRSENPDVT-FGQVGRILGERWKALTAEEK 73
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PYESKA+ K Y + YN
Sbjct: 74 QPYESKAQADKKRYESEKELYN 95
>gi|115459940|ref|NP_001053570.1| Os04g0564600 [Oryza sativa Japonica Group]
gi|38345400|emb|CAE03091.2| OSJNBa0017B10.6 [Oryza sativa Japonica Group]
gi|113565141|dbj|BAF15484.1| Os04g0564600 [Oryza sativa Japonica Group]
gi|116309704|emb|CAH66751.1| H0409D10.9 [Oryza sativa Indica Group]
gi|116309707|emb|CAH66753.1| OSIGBa0158F05.2 [Oryza sativa Indica Group]
gi|125549359|gb|EAY95181.1| hypothetical protein OsI_16998 [Oryza sativa Indica Group]
gi|149391231|gb|ABR25633.1| hmg1/2-like protein [Oryza sativa Indica Group]
gi|213959192|gb|ACJ54930.1| HMG protein [Oryza sativa Japonica Group]
gi|215767864|dbj|BAH00093.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629376|gb|EEE61508.1| hypothetical protein OsJ_15798 [Oryza sativa Japonica Group]
gi|323388963|gb|ADX60286.1| HMG transcription factor [Oryza sativa Japonica Group]
Length = 132
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 71/131 (54%), Gaps = 13/131 (9%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
A D+ K GKR+K KPKR + FF FL EFR + +++PN V+AV KAAG
Sbjct: 4 ADADAEFKAAGKRKKAG--GAGKPKRGLTPFFAFLAEFRPQYMEKHPNTKGVAAVTKAAG 61
Query: 92 GKWKSMSPAEKAPYESK----------AEKLKSEYGKKMNAYNKKQDGDEASDKSKSEV- 140
KW++MS EKA Y K A K K K + + E SDKSKS+V
Sbjct: 62 EKWRAMSDEEKAQYGGKKPDGESKPAAASKKKESTSSKKAKTDGAEQEGEGSDKSKSDVE 121
Query: 141 NDEDEASGEEE 151
+DE++ SGE+E
Sbjct: 122 DDENDGSGEDE 132
>gi|67484144|ref|XP_657292.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56474548|gb|EAL51913.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 114
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN+PKRPP+ +F++L E R + K+E+P++ + + K A +WK++ EK Y++KA+
Sbjct: 26 PNRPKRPPTPYFIYLNEHRASIKEEHPDIR-FTEISKVASEQWKALGEEEKKEYQTKADA 84
Query: 112 LKSEYGKKMNAYNKKQDG 129
K +Y K M YN K+
Sbjct: 85 AKEQYKKDMEKYNNKKQA 102
>gi|346472777|gb|AEO36233.1| hypothetical protein [Amblyomma maculatum]
Length = 208
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 75/126 (59%), Gaps = 10/126 (7%)
Query: 1 MKGAKGKGAARVSQEA------LKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNK 54
M R++ EA + ++ V +++AA S +K + ++ K + NK
Sbjct: 48 MHSCSLDSKIRMNLEAQVVEKETEVKNKPVERKRAAP----SENKERKVKKGKKNVNTNK 103
Query: 55 PKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKS 114
PKR P+AFF+F+++FRK +K+ +P+ +V++V K G +W+SM+ EK PY +A +LK+
Sbjct: 104 PKRAPTAFFLFMDDFRKEYKELHPDNKSVASVAKEGGERWRSMTIEEKKPYTDRAAELKA 163
Query: 115 EYGKKM 120
EY K++
Sbjct: 164 EYVKEI 169
>gi|395732940|ref|XP_002813012.2| PREDICTED: nuclear autoantigen Sp-100-like [Pongo abelii]
Length = 263
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPP AFF+F E+R K E+P ++ V K A G W + + A+K YE+KA
Sbjct: 150 DPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLA-GMWNNTAAADKQFYENKAA 208
Query: 111 KLKSEYGKKMNAYNKK 126
+LK +Y K + AY K
Sbjct: 209 RLKEKYKKDIAAYRAK 224
>gi|213959194|gb|ACJ54931.1| HMG protein [Oryza sativa Japonica Group]
Length = 131
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 74/130 (56%), Gaps = 12/130 (9%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
A D+ K GKR+K KPKR + FF FL EFR + +++PN V+AV KAAG
Sbjct: 4 ADADAEFKAAGKRKKAG--GAGKPKRGLTPFFAFLAEFRPQYMEKHPNTKGVAAVTKAAG 61
Query: 92 GKWKSMSPAEKAPYESK-----AEKLKSEYGKKMNAYNKKQDG----DEASDKSKSEV-N 141
KW++MS EKA Y K ++ + K ++ K DG E SDKSKS+V +
Sbjct: 62 EKWRAMSDEEKAQYGGKKPDGESKPAAASKKKSTSSKKAKTDGAEQEGEGSDKSKSDVED 121
Query: 142 DEDEASGEEE 151
DE++ SGE+E
Sbjct: 122 DENDGSGEDE 131
>gi|410930542|ref|XP_003978657.1| PREDICTED: high mobility group protein B2-like [Takifugu rubripes]
Length = 201
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
Query: 42 GKREKKAKKDPNKPKRPPSAFF-VFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
GKR +K +KDPN PKRPPSAFF F E+R + K++ P ++ + K G W ++ +
Sbjct: 85 GKRGRK-RKDPNAPKRPPSAFFV-FCSEYRPSVKQQYPGLS-IGDCAKKLGEMWSKLTQS 141
Query: 101 EKAPYESKAEKLKSEYGKKMNAY 123
EK PYE KA+KL+ +Y + M AY
Sbjct: 142 EKQPYEEKAQKLREKYDRDMVAY 164
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
+KD NKPK SA+ F++ R+ +K+NP + A K +WK +S ++K +E
Sbjct: 3 RKDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKGLSASDKKCFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 MAKADKVRYNREMRDY 78
>gi|56756695|gb|AAW26520.1| SJCHGC07008 protein [Schistosoma japonicum]
Length = 213
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
SKRQ K++KK K DPN P RP SA+F++ E R+ K +V+ V KA G W++
Sbjct: 112 SSKRQTKKQKKPK-DPNAPTRPLSAYFLWFNENREKIAKSLSGQNSVAEVAKAGGELWRN 170
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAY 123
M K+ Y+S+ ++LK +Y + + Y
Sbjct: 171 MDSETKSTYQSRVDELKKKYQEDLRVY 197
>gi|168056739|ref|XP_001780376.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668218|gb|EDQ54830.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 207
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 45/76 (59%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRP S F VF+E FRKT+K NP V+A KA G KWK M+ E+APY AE
Sbjct: 107 DPNAPKRPASGFLVFMESFRKTYKDANPESKGVAAAAKAGGEKWKQMTEEERAPYNKDAE 166
Query: 111 KLKSEYGKKMNAYNKK 126
K Y + M Y K
Sbjct: 167 ARKLNYEQAMTNYKNK 182
>gi|358379174|gb|EHK16855.1| hypothetical protein TRIVIDRAFT_217092 [Trichoderma virens Gv29-8]
Length = 102
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
G+K GK K+ KKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK+
Sbjct: 10 GAKDGGK--KRTKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKLLGERWKA 66
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGD 130
++ ++APYE+KA K Y + AYN Q+ D
Sbjct: 67 LNDKQRAPYEAKAAADKKRYEDEKQAYNADQEED 100
>gi|444518140|gb|ELV11977.1| High mobility group protein B3 [Tupaia chinensis]
Length = 198
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + G+ EK KDPN PKR PS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKGGEEEK--GKDPNAPKRRPSVFFLFCSEFRLKIKSTNPGIS-IGDVAKKLGDVW 133
Query: 95 KSMSPAEKAPYESKAEKLK 113
++S +EK PY +KA KLK
Sbjct: 134 NNLSDSEKQPYITKAAKLK 152
>gi|339046261|ref|NP_009647.2| Nhp6bp [Saccharomyces cerevisiae S288c]
gi|341942236|sp|P11633.3|NHP6B_YEAST RecName: Full=Non-histone chromosomal protein 6B
gi|4036|emb|CAA33378.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45271022|gb|AAS56892.1| YBR089C-A [Saccharomyces cerevisiae]
gi|151946484|gb|EDN64706.1| nonhistone chromosomal protein [Saccharomyces cerevisiae YJM789]
gi|190408749|gb|EDV12014.1| 11 kDa nonhistone chromosomal protein [Saccharomyces cerevisiae
RM11-1a]
gi|256274037|gb|EEU08951.1| Nhp6bp [Saccharomyces cerevisiae JAY291]
gi|290878106|emb|CBK39165.1| Nhp6bp [Saccharomyces cerevisiae EC1118]
gi|333454471|tpg|DAA07210.2| TPA: Nhp6bp [Saccharomyces cerevisiae S288c]
Length = 99
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDPN PKR SA+ F E R + ENP+VT VG+ G +WK+++ EK
Sbjct: 15 KRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVT-FGQVGRILGERWKALTAEEK 73
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PYESKA+ K Y + YN
Sbjct: 74 QPYESKAQADKKRYESEKELYN 95
>gi|116206850|ref|XP_001229234.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183315|gb|EAQ90783.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 96
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 40 RQGKREKKA--KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
R GK EKK KKDPN PKR SA+ F E R ++ENP V+ VGK G +WK++
Sbjct: 8 RSGKAEKKTRQKKDPNAPKRGLSAYMFFANEQRDNVREENPGVS-FGQVGKILGERWKAL 66
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYN 124
S ++APYE+KA K Y + AYN
Sbjct: 67 SDKQRAPYEAKAAADKKRYEDEKQAYN 93
>gi|302411796|ref|XP_003003731.1| nucleosome binding protein [Verticillium albo-atrum VaMs.102]
gi|261357636|gb|EEY20064.1| nucleosome binding protein [Verticillium albo-atrum VaMs.102]
gi|346978438|gb|EGY21890.1| nucleosome binding protein [Verticillium dahliae VdLs.17]
Length = 102
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K+ K+AKKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK+++ ++
Sbjct: 13 KKAKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKLLGERWKALNEKQR 71
Query: 103 APYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
PYE+KA K Y + AYN + + DE++
Sbjct: 72 GPYEAKAVADKKRYEDEKAAYNAEAEDDESA 102
>gi|109490746|ref|XP_001074778.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392351213|ref|XP_003750876.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 211
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PK PPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKTPPSAFFLFCSEYRPKIKGEHPGLS-IGDVVKKLGEMWTNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E A KLK +Y K + AY K D A
Sbjct: 145 EKMAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP K + S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|145541886|ref|XP_001456631.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424443|emb|CAK89234.1| unnamed protein product [Paramecium tetraurelia]
Length = 235
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
EKK ++DPN PK+P + FF+F +++R+ NP + ++ + + AG KW SMS EK P
Sbjct: 41 EKKKERDPNAPKKPLTPFFLFNQKYREKVVDRNPEI-KLTQISQMAGNKWSSMSEQEKKP 99
Query: 105 YESKAEKLKSEYGKKMNAYNKKQDGDEASDK--SKSEVNDEDEASGEEEHQLE 155
Y + K +Y +++ YN+K +G E +DK KSE D+ +H ++
Sbjct: 100 YVDQYNAAKEKYEQELKDYNEK-NGIETNDKKRKKSEKVDDKSMKSALDHNID 151
>gi|340992807|gb|EGS23362.1| hypothetical protein CTHT_0010300 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 104
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R ++ENP ++ VGK G +WK+++ ++APYE+KA
Sbjct: 21 DPNAPKRGLSAYMFFANEQRDNVREENPGIS-FGQVGKILGERWKALTDKQRAPYEAKAA 79
Query: 111 KLKSEYGKKMNAYNKKQDGDEAS 133
K Y + AYN + DGD+ S
Sbjct: 80 ADKKRYEDEKQAYNAQADGDDDS 102
>gi|291403518|ref|XP_002718101.1| PREDICTED: high mobility group box 3-like [Oryctolagus cuniculus]
Length = 197
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S ++K Y +KA
Sbjct: 89 DPNAPKRPPSRFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDSDKQQYITKAA 147
Query: 111 KLKSEYGKKMNAYNKKQDGDEA 132
KLK +Y K + Y K D A
Sbjct: 148 KLKEKYEKDVTDYKSKGKFDGA 169
>gi|392354293|ref|XP_003751730.1| PREDICTED: high mobility group protein B3-like isoform 1 [Rattus
norvegicus]
Length = 241
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 118 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGIS-IGDVAKKLGEMW 172
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S +EK PY +KA KLK +Y K + Y K D A
Sbjct: 173 NNLSDSEKQPYMTKAAKLKEKYEKDVADYKSKGKFDGA 210
>gi|351710199|gb|EHB13118.1| High mobility group protein B3 [Heterocephalus glaber]
Length = 191
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN KRPPS FF+F EF K NP ++ + V K G W +++ +EK PY
Sbjct: 85 KKKKDPNATKRPPSGFFLFCSEFHPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPYI 143
Query: 107 SKAEKLKSEYGKKMNA 122
+KA KLK +Y K + A
Sbjct: 144 TKAAKLKEKYEKDVAA 159
>gi|348551110|ref|XP_003461373.1| PREDICTED: high mobility group protein B3-like [Cavia porcellus]
Length = 202
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S +EK PY +KA KLK +Y K + Y K D A
Sbjct: 132 NNLSDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGA 169
>gi|354495940|ref|XP_003510086.1| PREDICTED: high mobility group protein B3-like [Cricetulus griseus]
gi|344249016|gb|EGW05120.1| High mobility group protein B3 [Cricetulus griseus]
Length = 200
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S +EK PY +KA KLK +Y K + Y K D A
Sbjct: 132 NNLSDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGA 169
>gi|290560936|ref|NP_001166812.1| high mobility group box 3 [Rattus norvegicus]
gi|392354295|ref|XP_003751731.1| PREDICTED: high mobility group protein B3-like isoform 2 [Rattus
norvegicus]
gi|149027076|gb|EDL82825.1| rCG56793 [Rattus norvegicus]
gi|165971283|gb|AAI58740.1| Hmgb3 protein [Rattus norvegicus]
Length = 200
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S +EK PY +KA KLK +Y K + Y K D A
Sbjct: 132 NNLSDSEKQPYMTKAAKLKEKYEKDVADYKSKGKFDGA 169
>gi|118343822|ref|NP_001071733.1| transcription factor protein [Ciona intestinalis]
gi|70569841|dbj|BAE06487.1| transcription factor protein [Ciona intestinalis]
Length = 204
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRP SAFF+F + R K ENP T V + KA G KW + SP K Y + E
Sbjct: 94 DPNAPKRPQSAFFLFCADRRAPLKAENPGWT-VGEIAKALGKKWAAASPDTKKKYAEQGE 152
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDKSKSEV 140
KS+Y K+M Y +Q+ D + ++
Sbjct: 153 VEKSKYNKEMEKYRSQQEASNHGDAKRQKM 182
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYE 106
KKDPNKP+ + + F++ R+ K+++PN V A + +WK M+ EK +
Sbjct: 3 TKKDPNKPRGRMTGYAYFVQTCREEHKRKHPNEQVVFAEFSRKCAKRWKPMTDKEKKTFT 62
Query: 107 SKAEKLKSEYGKKMNAY 123
AEK + Y ++M Y
Sbjct: 63 DMAEKDRQRYEREMKDY 79
>gi|321259756|ref|XP_003194598.1| nonhistone protein 6 [Cryptococcus gattii WM276]
gi|317461070|gb|ADV22811.1| Nonhistone protein 6, putative [Cryptococcus gattii WM276]
Length = 110
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+++KKDPNKPKR SA+ F++++R+ K ENP T VGK G KW+ M+ EK PY
Sbjct: 19 RRSKKDPNKPKRALSAYMFFVQDYRERIKAENPEAT-FGDVGKLLGIKWREMNENEKKPY 77
Query: 106 ESKA 109
E+KA
Sbjct: 78 EAKA 81
>gi|148229870|ref|NP_001080585.1| high mobility group box 3 [Xenopus laevis]
gi|27882654|gb|AAH44009.1| Hmgb3-prov protein [Xenopus laevis]
Length = 202
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G ++ K KKDPN PKRPPS FF+F EFR K NP +T + V K G W
Sbjct: 77 DFGPVKK----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIT-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S +EK PY +K KLK +Y K + Y K D A
Sbjct: 132 NNLSDSEKQPYNNKGAKLKEKYEKDVADYKSKGKFDGA 169
>gi|57112857|ref|XP_538194.1| PREDICTED: high mobility group protein B3 [Canis lupus familiaris]
gi|338729649|ref|XP_001505130.3| PREDICTED: high mobility group protein B3-like isoform 1 [Equus
caballus]
Length = 201
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S +EK PY +KA KLK +Y K + Y K D A
Sbjct: 132 NNLSDSEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGA 169
>gi|417396975|gb|JAA45521.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 200
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S +EK PY +KA KLK +Y K + Y K D A
Sbjct: 132 NNLSDSEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGA 169
>gi|410989557|ref|XP_004001438.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B3
[Felis catus]
Length = 201
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S +EK PY +KA KLK +Y K + Y K D A
Sbjct: 132 NNLSDSEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGA 169
>gi|301778413|ref|XP_002924621.1| PREDICTED: high mobility group protein B3-like [Ailuropoda
melanoleuca]
Length = 201
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S +EK PY +KA KLK +Y K + Y K D A
Sbjct: 132 NNLSDSEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGA 169
>gi|224058355|ref|XP_002299486.1| high mobility group family [Populus trichocarpa]
gi|222846744|gb|EEE84291.1| high mobility group family [Populus trichocarpa]
Length = 498
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPK P SAFF+F E R EN NV V K AG +WK+M+ +K PYE A+
Sbjct: 295 DPLKPKHPLSAFFLFSNERRAALLAENKNVLEV---AKIAGEEWKNMTEKQKRPYEEIAK 351
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDKSKSE 139
K K +Y ++M AY KQ+ DE + K E
Sbjct: 352 KNKEKYTQEMEAY--KQNKDEEAMNLKKE 378
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPK+P S+F +F +E RK+ E+P + + S + KWK + EK + KA
Sbjct: 420 DPNKPKKPASSFLLFSKETRKSLVHEHPGINS-STLTAMISVKWKELIQEEKQIWNCKAA 478
Query: 111 KLKSEYGKKMNAYNK 125
+ Y K++ Y+K
Sbjct: 479 EAMEAYKKELEEYHK 493
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N+ KRP + ++ ++ KKENP+ + G KWK+++ EK PYE K +
Sbjct: 178 NEIKRPCPPYSLWCKDQWNEVKKENPD-AEFKDISHILGAKWKTITAEEKKPYEEKYQVE 236
Query: 113 KSEYGKKMN 121
K Y K M
Sbjct: 237 KEAYLKLMT 245
>gi|291410190|ref|XP_002721383.1| PREDICTED: high-mobility group box 3 [Oryctolagus cuniculus]
Length = 215
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 92 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 146
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S +EK PY +KA KLK +Y K + Y K D A
Sbjct: 147 NNLSDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGA 184
>gi|145540136|ref|XP_001455758.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423566|emb|CAK88361.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV--------TAVSAVGKAAGGKWKS 96
EKK ++DPN PKRP + FF+F +++R + NP + ++ + + AG KW S
Sbjct: 23 EKKKERDPNAPKRPLTPFFLFSQKYRDKVLERNPGIDQRDYSLEVKLTQISQMAGQKWNS 82
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
MS EK PY + + K++Y + YN K
Sbjct: 83 MSEEEKQPYVDQYNEAKNKYDGDLKVYNDKH 113
>gi|121705796|ref|XP_001271161.1| nucleosome binding protein (Nhp6a), putative [Aspergillus clavatus
NRRL 1]
gi|119399307|gb|EAW09735.1| nucleosome binding protein (Nhp6a), putative [Aspergillus clavatus
NRRL 1]
Length = 104
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
+ ++ + KR ++ KKDPN PKR SA+ F + R ++ENP ++ VGK G +WK
Sbjct: 6 TSTRTKTKRVERKKKDPNAPKRGLSAYMFFANDNRDKVREENPGIS-FGQVGKMLGERWK 64
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDE 131
++S +E+ PYE KA K Y + +YN Q+ DE
Sbjct: 65 ALSDSERRPYEEKAATDKKRYEDEKASYNAAQEEDE 100
>gi|118488333|gb|ABK95985.1| unknown [Populus trichocarpa]
Length = 232
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPK P SAFF+F E R EN NV V K AG +WK+M+ +K PYE A+
Sbjct: 29 DPLKPKHPLSAFFLFSNERRAALLAENKNVLEV---AKIAGEEWKNMTEKQKRPYEEIAK 85
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDKSKSE 139
K K +Y ++M AY KQ+ DE + K E
Sbjct: 86 KNKEKYTQEMEAY--KQNKDEEAMNLKKE 112
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPK+P S+F +F +E RK+ E+P + + S + KWK + EK + KA
Sbjct: 154 DPNKPKKPASSFLLFSKETRKSLVHEHPGINS-STLTAMISVKWKELIQEEKQIWNCKAA 212
Query: 111 KLKSEYGKKMNAYNK 125
+ Y K++ Y+K
Sbjct: 213 EAMEAYKKELEEYHK 227
>gi|294463267|gb|ADE77169.1| unknown [Picea sitchensis]
Length = 482
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+ +KDP+KPK P +AFF F E R +EN NV ++ K G +WK+M+ E+APY
Sbjct: 244 KRKEKDPSKPKHPVTAFFAFTNERRAALLEENHNVLQIA---KILGEEWKNMTKEERAPY 300
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEASDKS 136
E A + K +Y +M Y K++ +EAS S
Sbjct: 301 EQIAAEAKEKYMGEMELY-KQKKAEEASSAS 330
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PK+PP++F +F +E RK +E P V + + KWK + AEK + +A
Sbjct: 377 DPNRPKKPPTSFLLFSKETRKKLVQERPGVNN-TTINALISLKWKDLGTAEKQKWVDEAA 435
Query: 111 KLKSEYGKKMNAYNK 125
+Y K++ YNK
Sbjct: 436 GAMVQYKKEVEEYNK 450
>gi|367012149|ref|XP_003680575.1| hypothetical protein TDEL_0C04750 [Torulaspora delbrueckii]
gi|359748234|emb|CCE91364.1| hypothetical protein TDEL_0C04750 [Torulaspora delbrueckii]
Length = 93
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R + ENP+VT VG+ G +WK+++P EK PYESKAE
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDVT-FGQVGRLLGERWKALTPDEKTPYESKAE 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|167536391|ref|XP_001749867.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771582|gb|EDQ85246.1| predicted protein [Monosiga brevicollis MX1]
Length = 197
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R+K+AKKDPNKPK SA+ F ++ R F K+NP+ ++ V K G W+ MS A K
Sbjct: 27 RQKRAKKDPNKPKNAQSAYMFFSQKVRPQFSKDNPD-KKMTDVSKLIGAAWREMSDAAKK 85
Query: 104 PYESKAEKLKSEYGKKMNAY 123
PYE A + K Y +M Y
Sbjct: 86 PYEEMARRDKQRYQHQMATY 105
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR K+ +KDP+ PK+P +A+F++ + R + +N N T V+ + K G +WK +S A
Sbjct: 114 GKRGKR-RKDPDAPKKPLTAYFLYAADRRAALRAQNRNAT-VADIAKIIGAEWKDLSDAV 171
Query: 102 KAPYESKAEKLKSEYGKKMNAY 123
K PY+ +A++LKS+Y K++ Y
Sbjct: 172 KKPYQDRADRLKSQYQKEVELY 193
>gi|346986304|ref|NP_001069753.2| high mobility group protein B3 isoform 1 [Bos taurus]
Length = 274
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 151 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGIS-IGDVAKKLGEMW 205
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S +EK PY +KA KLK +Y K + Y K D A
Sbjct: 206 NNLSDSEKQPYINKAAKLKEKYEKDVADYKSKGKFDGA 243
>gi|350588033|ref|XP_003482539.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
gi|350588037|ref|XP_003482541.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 196
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S +EK PY +KA KLK +Y K + Y K D A
Sbjct: 132 NNLSDSEKQPYINKAAKLKEKYEKDVADYKSKGKFDGA 169
>gi|401402785|ref|XP_003881334.1| high mobility group protein, related [Neospora caninum Liverpool]
gi|325115746|emb|CBZ51301.1| high mobility group protein, related [Neospora caninum Liverpool]
Length = 94
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPY 105
KAKKDPN PKRP SAF F ++ R+ ++NP + + ++ VGK G W +S A+K PY
Sbjct: 12 KAKKDPNAPKRPLSAFIFFSKDKREEIIRKNPELKSKLAEVGKMVGEAWGKLSDAQKKPY 71
Query: 106 ESKAEKLKSEYGKKMNAYNK 125
ESKA K+ Y ++M AY K
Sbjct: 72 ESKAVADKARYEREMIAYKK 91
>gi|118344422|ref|NP_001072036.1| transcription factor protein [Ciona intestinalis]
gi|70570508|dbj|BAE06614.1| transcription factor protein [Ciona intestinalis]
Length = 447
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFK-KENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
+DPN+PKRPPSA+F+FL +FRK + K +P + K AG W S+S AEK PY
Sbjct: 262 RDPNRPKRPPSAYFLFLADFRKNYPGKSDP----AKEITKKAGEAWNSLSDAEKTPYYRS 317
Query: 109 AEKLKSEYGKKMNAY 123
A+ +++++ + + AY
Sbjct: 318 AQLVRAKWEQDLEAY 332
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 40 RQGKR--EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
R+G++ +KK +K KRP +A+ F+ ++R+T K+ V + +A KW++M
Sbjct: 173 RRGRKPTDKKKRKRHTWVKRPTTAYLYFVSKYRETLKEAGEVVPKAKIITQACAEKWRNM 232
Query: 98 SPAEKAPY 105
+ EK P+
Sbjct: 233 NEEEKEPF 240
>gi|395545985|ref|XP_003774876.1| PREDICTED: high mobility group protein B3-like [Sarcophilus
harrisii]
Length = 201
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGD 130
++S +EK PY +KA KLK +Y K + Y K D
Sbjct: 132 NNLSDSEKQPYNNKAAKLKEKYEKDVADYKSKGKFD 167
>gi|149410917|ref|XP_001509199.1| PREDICTED: high mobility group protein B3-like isoform 1
[Ornithorhynchus anatinus]
gi|345306624|ref|XP_003428488.1| PREDICTED: high mobility group protein B3-like isoform 2
[Ornithorhynchus anatinus]
Length = 201
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGD 130
++S +EK PY +KA KLK +Y K + Y K D
Sbjct: 132 NNLSDSEKQPYNNKAAKLKEKYEKDVADYKSKGKFD 167
>gi|444518919|gb|ELV12461.1| High mobility group protein B3 [Tupaia chinensis]
Length = 185
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + GK+ K+DPN PKRPPS FF+F EF + NP ++ + V K G W
Sbjct: 77 DYGPAKGGKK----KRDPNAPKRPPSGFFLFCSEFCPKIRSNNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSE 115
+ S +EK PY +KA KLK E
Sbjct: 132 NNKSDSEKQPYNTKATKLKYE 152
>gi|365762037|gb|EHN03653.1| Nhp6bp [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401841847|gb|EJT44170.1| NHP6B-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 102
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDPN PKR SA+ F E R + ENP+VT VG+ G KWK+++ +K
Sbjct: 18 KRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVT-FGQVGRILGEKWKALTAEDK 76
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PYESKA+ K Y + YN
Sbjct: 77 QPYESKAQADKKRYESEKELYN 98
>gi|148277100|ref|NP_081312.2| high mobility group protein B4 [Mus musculus]
gi|81892334|sp|Q6P8W9.1|HMGB4_MOUSE RecName: Full=High mobility group protein B4
gi|38174595|gb|AAH61030.1| High-mobility group box 4 [Mus musculus]
gi|148698295|gb|EDL30242.1| high-mobility group box 4 [Mus musculus]
Length = 181
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 7/106 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A A+LD +Q GKR K+ K+DP P++PPS+F +F + K+ENP+ T V
Sbjct: 62 ALAELDKARYQQEMMNYIGKRRKRRKRDPKAPRKPPSSFLLFSRDHYAMLKQENPDWTVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDG 129
V KAAG W + AEK PYE KA ++++Y ++ AY + G
Sbjct: 122 Q-VAKAAGKMWSTTDEAEKKPYEQKAALMRAKYFEEQEAYRNQCQG 166
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KD +PK S++ F+ FR FK++ PN + KW+S+S EKA YE+
Sbjct: 4 KDQLRPKVNVSSYIHFMLNFRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEAL 63
Query: 109 AEKLKSEYGKKMNAY 123
AE K+ Y ++M Y
Sbjct: 64 AELDKARYQQEMMNY 78
>gi|154284354|ref|XP_001542972.1| nucleosome binding protein [Ajellomyces capsulatus NAm1]
gi|150406613|gb|EDN02154.1| nucleosome binding protein [Ajellomyces capsulatus NAm1]
gi|240273630|gb|EER37150.1| nucleosome binding protein [Ajellomyces capsulatus H143]
gi|325087527|gb|EGC40837.1| nucleosome binding protein [Ajellomyces capsulatus H88]
Length = 102
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK+++ ++APYE
Sbjct: 17 KKKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKVLGERWKALNEKQRAPYE 75
Query: 107 SKAEKLKSEYGKKMNAYNKKQDGDEAS 133
+KA K Y + +YN + + DE+S
Sbjct: 76 AKAAADKKRYEDEKASYNAQDEDDESS 102
>gi|81673590|gb|AAI09794.1| High-mobility group box 3 [Bos taurus]
gi|296471156|tpg|DAA13271.1| TPA: high mobility group protein B3 isoform 1 [Bos taurus]
Length = 236
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 113 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGIS-IGDVAKKLGEMW 167
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S +EK PY +KA KLK +Y K + Y K D A
Sbjct: 168 NNLSDSEKQPYINKAAKLKEKYEKDVADYKSKGKFDGA 205
>gi|28279681|gb|AAH45917.1| High-mobility group box 1 [Danio rerio]
gi|182891806|gb|AAI65307.1| Hmgb1 protein [Danio rerio]
Length = 205
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K+E P ++ + V K G W +S EK PY
Sbjct: 85 KKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETPGLS-IGDVAKRLGEMWNKISSEEKQPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKAAKLKEKYEKDIAAYRSK 164
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P T S K +WK+MS EK +E
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 AKLDKARYEREMKNY 77
>gi|42476233|ref|NP_955849.2| high mobility group protein B1 [Danio rerio]
gi|37681827|gb|AAQ97791.1| high-mobility group box 1 [Danio rerio]
gi|45595607|gb|AAH67193.1| High-mobility group box 1 [Danio rerio]
Length = 205
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K+E P ++ + V K G W +S EK PY
Sbjct: 85 KKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETPGLS-IGDVAKRLGEMWNKISSEEKQPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKAAKLKEKYEKDIAAYRSK 164
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P T S K +WK+MS EK +E
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 AKLDKARYEREMKNY 77
>gi|164450473|ref|NP_001106728.1| high mobility group protein B3 isoform 2 [Bos taurus]
gi|146324910|sp|Q32L31.2|HMGB3_BOVIN RecName: Full=High mobility group protein B3
gi|296471157|tpg|DAA13272.1| TPA: high mobility group protein B3 isoform 2 [Bos taurus]
gi|399227521|gb|AFP36466.1| HMGB3 transcript variant 1/2 [Bos taurus]
gi|399227522|gb|AFP36467.1| HMGB3 transcript variant 3 [Bos taurus]
Length = 200
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S +EK PY +KA KLK +Y K + Y K D A
Sbjct: 132 NNLSDSEKQPYINKAAKLKEKYEKDVADYKSKGKFDGA 169
>gi|118343940|ref|NP_001071792.1| transcription factor protein [Ciona intestinalis]
gi|70570753|dbj|BAE06615.1| transcription factor protein [Ciona intestinalis]
Length = 310
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFK-KENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
+DPN+PKRPPSA+F+FL +FRK + K +P + K AG W S+S AEK PY
Sbjct: 125 RDPNRPKRPPSAYFLFLADFRKNYPGKSDP----AKEITKKAGEAWNSLSDAEKTPYYRS 180
Query: 109 AEKLKSEYGKKMNAY 123
A+ +++++ + + AY
Sbjct: 181 AQLVRAKWEQDLEAY 195
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 40 RQGKR--EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
R+G++ +KK +K KRP +A+ F+ ++R+T K+ V + +A KW++M
Sbjct: 36 RRGRKPTDKKKRKRHTWVKRPTTAYLYFVSKYRETLKEAGEVVPKAKIITQACAEKWRNM 95
Query: 98 SPAEKAPY 105
+ EK P+
Sbjct: 96 NEEEKEPF 103
>gi|547652|sp|P36194.2|HMGB1_CHICK RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|391636|dbj|BAA03260.1| HMG-1 [Gallus gallus]
Length = 201
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 76 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 130
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGD 130
++S EK PY +KA KLK +Y K + Y K D
Sbjct: 131 NNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFD 166
>gi|440910877|gb|ELR60625.1| High mobility group protein B3 [Bos grunniens mutus]
Length = 236
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 113 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGIS-IGDVAKKLGEMW 167
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S +EK PY +KA KLK +Y K + Y K D A
Sbjct: 168 NNLSDSEKQPYINKAAKLKEKYEKDVADYKSKGKFDGA 205
>gi|224098124|ref|XP_002198052.1| PREDICTED: high mobility group protein B3 isoform 1 [Taeniopygia
guttata]
gi|326924638|ref|XP_003208532.1| PREDICTED: high mobility group protein B3-like [Meleagris
gallopavo]
gi|449498655|ref|XP_004177286.1| PREDICTED: high mobility group protein B3 isoform 2 [Taeniopygia
guttata]
Length = 202
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGD 130
++S EK PY +KA KLK +Y K + Y K D
Sbjct: 132 NNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFD 167
>gi|56384901|gb|AAV85889.1| high mobility group 1 protein [Pelodiscus sinensis]
Length = 202
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGD 130
++S EK PY +KA KLK +Y K + Y K D
Sbjct: 132 NNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFD 167
>gi|449269345|gb|EMC80131.1| High mobility group protein B3 [Columba livia]
Length = 202
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGD 130
++S EK PY +KA KLK +Y K + Y K D
Sbjct: 132 NNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFD 167
>gi|225556517|gb|EEH04805.1| non-histone chromosomal protein 6 [Ajellomyces capsulatus G186AR]
Length = 102
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK+++ ++APYE
Sbjct: 17 KKKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKVLGERWKALNEKQRAPYE 75
Query: 107 SKAEKLKSEYGKKMNAYNKKQDGDEAS 133
+KA K Y + +YN + + DE+S
Sbjct: 76 AKAAADKKRYEDEKASYNAQDEDDESS 102
>gi|148694627|gb|EDL26574.1| mCG10155, isoform CRA_b [Mus musculus]
Length = 206
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 83 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 137
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S EK PY +KA KLK +Y K + Y K D A
Sbjct: 138 NNLSDNEKQPYVTKAAKLKEKYEKDVADYKSKGKFDGA 175
>gi|444729655|gb|ELW70064.1| High mobility group protein B1 [Tupaia chinensis]
Length = 161
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G+ EKK K DPN PKRPP AFF+F E+ K+E+P+++ + V K G W + +
Sbjct: 82 KGETEKKFK-DPNVPKRPPLAFFLFCSEYHPKIKEEHPDLS-IGDVAKILGEMWNNTAAD 139
Query: 101 EKAPYESKAEKLKSEYGKKMNAY 123
+K PYE KA KLK +Y K + AY
Sbjct: 140 DKQPYE-KAAKLKEKYEKDIAAY 161
>gi|148694630|gb|EDL26577.1| mCG10155, isoform CRA_d [Mus musculus]
Length = 220
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 97 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 151
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S EK PY +KA KLK +Y K + Y K D A
Sbjct: 152 NNLSDNEKQPYVTKAAKLKEKYEKDVADYKSKGKFDGA 189
>gi|148682307|gb|EDL14254.1| mCG114640 [Mus musculus]
Length = 200
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S EK PY +KA KLK +Y K + Y K D A
Sbjct: 132 NNLSDNEKQPYVTKAAKLKEKYEKDVADYKSKGKFDGA 169
>gi|6680231|ref|NP_032279.1| high mobility group protein B3 [Mus musculus]
gi|20138160|sp|O54879.3|HMGB3_MOUSE RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|2738989|gb|AAC16925.1| high mobility group protein homolog HMG4 [Mus musculus]
gi|15030059|gb|AAH11276.1| Hmgb3 protein [Mus musculus]
gi|26327985|dbj|BAC27733.1| unnamed protein product [Mus musculus]
gi|54035419|gb|AAH83352.1| High mobility group box 3 [Mus musculus]
gi|74146994|dbj|BAE27437.1| unnamed protein product [Mus musculus]
gi|74186760|dbj|BAE34835.1| unnamed protein product [Mus musculus]
gi|74192972|dbj|BAE34988.1| unnamed protein product [Mus musculus]
gi|74194280|dbj|BAE24671.1| unnamed protein product [Mus musculus]
gi|148694626|gb|EDL26573.1| mCG10155, isoform CRA_a [Mus musculus]
gi|148694628|gb|EDL26575.1| mCG10155, isoform CRA_a [Mus musculus]
gi|187957408|gb|AAI58038.1| High mobility group box 3 [Mus musculus]
Length = 200
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S EK PY +KA KLK +Y K + Y K D A
Sbjct: 132 NNLSDNEKQPYVTKAAKLKEKYEKDVADYKSKGKFDGA 169
>gi|223649496|gb|ACN11506.1| High mobility group protein B3 [Salmo salar]
Length = 207
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKRPPS FF+F + R K ++P++ + V K G +W +++ A K PY K
Sbjct: 87 KKDPNAPKRPPSGFFIFCADHRPKIKAQHPSL-GIGDVAKKLGEQWNNLTDATKQPYLIK 145
Query: 109 AEKLKSEYGKKMNAY 123
A KLK +Y K + Y
Sbjct: 146 ANKLKDKYQKDVADY 160
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYE 106
AK P KPK SA+ F++ R+ KK++P + A K G+WK+MS EK +E
Sbjct: 2 AKGTPGKPKGKMSAYAYFVQTCREEHKKKSPEIPVNFAEFSKKCSGRWKTMSGKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A++ K Y +M +
Sbjct: 62 DMAKQDKVRYDNEMMHF 78
>gi|224072172|ref|XP_002303636.1| high mobility group family [Populus trichocarpa]
gi|222841068|gb|EEE78615.1| high mobility group family [Populus trichocarpa]
Length = 480
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K +KDP KPK+P SAFF+F E R EN +V V K AG +WK+M+ + PYE
Sbjct: 265 KKEKDPLKPKQPLSAFFLFCNERRAALLAENKSVLEV---AKIAGEEWKNMTEKRRGPYE 321
Query: 107 SKAEKLKSEYGKKMNAYNKKQDGDEASDKSKSEVNDEDEASGEEEHQL 154
A+K + +Y ++M AY KQ DE + K E + + +E QL
Sbjct: 322 EVAKKNREKYMQEMEAY--KQTKDEEAMNLKKEEEELVKVQKQEAWQL 367
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPK+P S+F +F +E RK+ E P + S + KWK ++ E+ + SKA
Sbjct: 394 DPNKPKKPASSFLLFSKETRKSLMDERPGINN-STLTAMISVKWKELNEEERQIWNSKAA 452
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDK 135
+ Y K++ Y+K ++DK
Sbjct: 453 EAMEAYKKELEEYSKSLAAATSNDK 477
>gi|47227840|emb|CAG09003.1| unnamed protein product [Tetraodon nigroviridis]
Length = 199
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K ENP +T + K G W S + +K PY
Sbjct: 85 KKRFKDPNAPKRPPSAFFLFCAEFRPKVKSENPGLT-IGDTAKKLGEMWNSKTAEDKQPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
E KA KLK +Y K + AY K D S
Sbjct: 144 EKKAAKLKEKYDKDIVAYRTKGKVDSES 171
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P+ + A K +WK+MSP EK +E
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y ++M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|296199401|ref|XP_002747150.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 209
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVG--KAAGGKWKSMSPAEKA 103
KK KDPN PKR PSAFF+F E K E+P ++ VG K G W + + +K
Sbjct: 92 KKKFKDPNAPKRFPSAFFLFCSECYPKIKGEHPGLS----VGDVKKLGEMWSNTAAGDKQ 147
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
PYE KA KL+ +YG+++ AY K D A
Sbjct: 148 PYEKKAAKLRKKYGRELAAYGAKGKSDAA 176
>gi|403305854|ref|XP_003943467.1| PREDICTED: high mobility group protein B3 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
+++ +EK PY +KA KLK +Y K + Y K D A
Sbjct: 132 NNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGA 169
>gi|448079731|ref|XP_004194450.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
gi|359375872|emb|CCE86454.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
Length = 92
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDP+ PKR SA+ F E R + ENP ++ VGK G KWK+MS +K
Sbjct: 7 KRASRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGIS-FGQVGKLLGEKWKAMSSEDK 65
Query: 103 APYESKAEKLKSEYGKKMNAYNKKQDG 129
PYE+KAE K Y K+ Y KK
Sbjct: 66 TPYETKAEADKKRYEKEKAEYAKKNSA 92
>gi|147903143|ref|NP_001079387.1| high mobility group box 2 [Xenopus laevis]
gi|80479234|gb|AAI08500.1| MGC52825 protein [Xenopus laevis]
Length = 211
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R K E P ++ + K G +W + +K P+E KA
Sbjct: 92 DPNAPKRPPSAFFLFCSEQRPQIKSETPGLS-IGDTAKKLGERWSEQTSKDKLPFEQKAA 150
Query: 111 KLKSEYGKKMNAYNKKQDGD 130
KLK +Y K + AY K D
Sbjct: 151 KLKEKYEKDVAAYRAKGKSD 170
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYE 106
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK +E
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 DMAKGDKVRYEREMKTY 78
>gi|27370889|gb|AAH41262.1| MGC52825 protein [Xenopus laevis]
Length = 212
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R K E P ++ + K G +W + +K P+E KA
Sbjct: 92 DPNAPKRPPSAFFLFCSEQRPQIKSETPGLS-IGDTAKKLGERWSEQTSKDKLPFEQKAA 150
Query: 111 KLKSEYGKKMNAYNKKQDGD 130
KLK +Y K + AY K D
Sbjct: 151 KLKEKYEKDVAAYRAKGKSD 170
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYE 106
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK +E
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 DMAKGDKVRYEREMKTY 78
>gi|344299188|ref|XP_003421269.1| PREDICTED: high mobility group protein B3-like [Loxodonta africana]
Length = 200
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S EK PY +KA KLK +Y K + Y K D A
Sbjct: 132 NNLSDNEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGA 169
>gi|426215132|ref|XP_004001831.1| PREDICTED: high mobility group protein B4 [Ovis aries]
Length = 196
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 62/100 (62%), Gaps = 7/100 (7%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ G+R+K+ K+DP+ P+RPPS+F +F ++ K ENP+ + V
Sbjct: 64 ALAKLDKARYQEEMMNYLGRRKKRRKRDPHAPRRPPSSFLLFCQDHYAQLKSENPSWSVV 123
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
V KA+G W + + +K PYE +A L+++Y ++++ Y
Sbjct: 124 Q-VAKASGKMWSAKTDVDKQPYEQRAALLRAKYREELSVY 162
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYES 107
K+D KPK S++ FL +R FK++ PN + KW+S+S EKA YE+
Sbjct: 5 KRDHLKPKANVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEA 64
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 65 LAKLDKARYQEEMMNY 80
>gi|94966915|ref|NP_001035652.1| high mobility group protein B4 [Bos taurus]
gi|119370723|sp|Q32L34.1|HMGB4_BOVIN RecName: Full=High mobility group protein B4
gi|81673105|gb|AAI09791.1| High-mobility group box 4 [Bos taurus]
gi|296488916|tpg|DAA31029.1| TPA: high mobility group protein B4 [Bos taurus]
Length = 194
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 62/100 (62%), Gaps = 7/100 (7%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ G+R+K+ K+DP+ P+RPPS+F +F ++ K ENP+ + V
Sbjct: 62 ALAKLDKARYQEEMMNYFGRRKKRRKRDPHAPRRPPSSFLLFCQDHYAQLKSENPSWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
V KA+G W + + +K PYE +A L+++Y ++++ Y
Sbjct: 122 Q-VAKASGKMWSAKTDVDKQPYEQRAALLRAKYREELSVY 160
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYES 107
K+D KPK S++ FL +R FK++ PN + KW+S+S EKA YE+
Sbjct: 3 KRDQLKPKANVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEA 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 LAKLDKARYQEEMMNY 78
>gi|254580675|ref|XP_002496323.1| ZYRO0C15752p [Zygosaccharomyces rouxii]
gi|238939214|emb|CAR27390.1| ZYRO0C15752p [Zygosaccharomyces rouxii]
Length = 98
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R + ENP+VT VG+ G KWK+++P EK PYE+KAE
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRAENPDVT-FGQVGRILGEKWKALTPDEKTPYEAKAE 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|170784871|ref|NP_001116308.1| wu:fk52f12 [Danio rerio]
Length = 213
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR KK KDPN PKRPPS FF+F E R K + P++ + V K G W ++ A
Sbjct: 81 GKRGKK--KDPNAPKRPPSGFFLFCSEHRPQIKAQYPSL-GIGDVAKKLGEMWNGLTDAN 137
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKK 126
K P+ KA KLK +Y K + Y K
Sbjct: 138 KQPFLMKANKLKDKYQKDVADYKTK 162
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYE 106
AK DP KPK SA+ F++ R+ KK++P + + S K G+WK+M+ EK+ +E
Sbjct: 2 AKGDPRKPKGKMSAYAYFVQTCREEHKKKSPEIPVSFSEFSKRCSGRWKAMTDKEKSRFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A++ K Y ++M Y
Sbjct: 62 DMAKQDKVRYDQEMMHY 78
>gi|351702997|gb|EHB05916.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 204
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKR PS FF+F E+R K E+P ++ V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRAPSTFFLFCSEYRPKIKGEHPGLS-TGDVAKKLGEMWNNTAAGDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA +LK +Y K + AY K D A
Sbjct: 145 EKKAAELKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++ + + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVKFSEYSKKCSERWKTMSAKEKGTFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y +KM Y
Sbjct: 63 MAKVDKARYERKMKTY 78
>gi|443897570|dbj|GAC74910.1| HMG box-containing protein [Pseudozyma antarctica T-34]
Length = 280
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 16 ALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKK 75
AL P+D + ++ A A K++G + +DP KPKRP SAFF FL + R + +
Sbjct: 175 ALSPDD--IKRQNAYIA----SQKKKGIKGTAFLRDPAKPKRPNSAFFEFLNDLRAS-ES 227
Query: 76 ENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYN 124
PN+T S G G +WK M+P +KAPYE +A + +Y + + YN
Sbjct: 228 VIPNITEFSKRG---GERWKQMTPDQKAPYEQRALQALEQYKRDLEVYN 273
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 18/96 (18%)
Query: 60 SAFFVFLEE----------FRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
S+F +++ E ++KT K V + + KA G +W + P +KA YE++
Sbjct: 99 SSFLIYMSERVSQLKGEPQYQKTSPKTGAQVVDIVKMAKAVGAEWAQLPPNQKARYEAQH 158
Query: 110 EKLKSEYGKKMNAYN--------KKQDGDEASDKSK 137
E+ K EY + + + K+Q+ AS K K
Sbjct: 159 EQEKEEYERALAEWKAALSPDDIKRQNAYIASQKKK 194
>gi|448084218|ref|XP_004195549.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
gi|359376971|emb|CCE85354.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
Length = 92
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
S + KR + KKDP+ PKR SA+ F E R + ENP ++ VGK G KWK+M
Sbjct: 2 STTEKKRASRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGIS-FGQVGKLLGEKWKAM 60
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
+ +K PYESKAE K Y K+ Y KK
Sbjct: 61 TSDDKTPYESKAEADKKRYEKEKAEYAKK 89
>gi|157822723|ref|NP_001102933.1| high mobility group protein B4 [Rattus norvegicus]
gi|149023997|gb|EDL80494.1| rCG31445 [Rattus norvegicus]
Length = 181
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 9/101 (8%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVF-LEEFRKTFKKENPNVTA 82
A AKLD ++ GKR K+ K+DP P++PPS+F +F L+ F K K+ENPN T
Sbjct: 62 AIAKLDKARYQEEMMNYVGKRRKRRKRDPLAPRKPPSSFLLFSLDHFAK-LKQENPNWTV 120
Query: 83 VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
V V KAAG W ++ +K PYE KA ++++Y ++ AY
Sbjct: 121 VQ-VAKAAGKMWSMITDVDKRPYEQKAAIMRAKYFQEREAY 160
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYES 107
KK +PK S++ F+ FR FK++ PN + + KW+S+S EKA +E+
Sbjct: 3 KKVQLRPKVNVSSYIHFMINFRNKFKEQQPNTYLTFNEFSRRCSEKWRSISKNEKAKFEA 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 IAKLDKARYQEEMMNY 78
>gi|334348387|ref|XP_003342057.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B3
[Monodelphis domestica]
Length = 208
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KD N PK PPS FF+F EFR K NP ++ + V K G W ++S EK PY +KA
Sbjct: 88 KDSNAPKHPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDNEKQPYNNKA 146
Query: 110 EKLKSEY 116
KLK +Y
Sbjct: 147 AKLKEKY 153
>gi|410219302|gb|JAA06870.1| high mobility group box 3 [Pan troglodytes]
Length = 199
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
+++ +EK PY +KA KLK +Y K + Y K D A
Sbjct: 132 NNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGA 169
>gi|296236643|ref|XP_002763412.1| PREDICTED: high mobility group protein B3-like [Callithrix jacchus]
Length = 203
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
+++ +EK PY +KA KLK +Y K + Y K D A
Sbjct: 132 NNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGA 169
>gi|167773205|gb|ABZ92037.1| high-mobility group box 3 [synthetic construct]
Length = 198
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
+++ +EK PY +KA KLK +Y K + Y K D A
Sbjct: 132 NNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGA 169
>gi|109132602|ref|XP_001091672.1| PREDICTED: high mobility group protein B3-like isoform 3 [Macaca
mulatta]
gi|109132606|ref|XP_001091441.1| PREDICTED: high mobility group protein B3-like isoform 1 [Macaca
mulatta]
gi|402911729|ref|XP_003918461.1| PREDICTED: high mobility group protein B3 isoform 1 [Papio anubis]
gi|402911731|ref|XP_003918462.1| PREDICTED: high mobility group protein B3 isoform 2 [Papio anubis]
Length = 201
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
+++ +EK PY +KA KLK +Y K + Y K D A
Sbjct: 132 NNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGA 169
>gi|71143137|ref|NP_005333.2| high mobility group protein B3 [Homo sapiens]
gi|426397735|ref|XP_004065062.1| PREDICTED: high mobility group protein B3 isoform 1 [Gorilla
gorilla gorilla]
gi|426397739|ref|XP_004065064.1| PREDICTED: high mobility group protein B3 isoform 3 [Gorilla
gorilla gorilla]
gi|85701353|sp|O15347.4|HMGB3_HUMAN RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|47124341|gb|AAH70482.1| HMGB3 protein [Homo sapiens]
gi|117645316|emb|CAL38124.1| hypothetical protein [synthetic construct]
gi|117646384|emb|CAL38659.1| hypothetical protein [synthetic construct]
gi|119619803|gb|EAW99397.1| high-mobility group box 3, isoform CRA_a [Homo sapiens]
gi|410351655|gb|JAA42431.1| high mobility group box 3 [Pan troglodytes]
gi|410351657|gb|JAA42432.1| high mobility group box 3 [Pan troglodytes]
Length = 200
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
+++ +EK PY +KA KLK +Y K + Y K D A
Sbjct: 132 NNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGA 169
>gi|406862701|gb|EKD15750.1| nucleosome binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 102
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
G+ EKK KKDPN PKR SA+ F E R+ ++ENP +T VGK G +WK+++ +
Sbjct: 13 GRTEKK-KKDPNAPKRGLSAYMFFANEQRENVREENPGIT-FGQVGKVLGERWKALNDKQ 70
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
+ PYE+KA + K Y + +YN + +E+S
Sbjct: 71 RTPYEAKAAQDKKRYEDEKASYNADAEEEESS 102
>gi|397466921|ref|XP_003805186.1| PREDICTED: high mobility group protein B3 [Pan paniscus]
gi|410057106|ref|XP_001135676.3| PREDICTED: high mobility group protein B3 isoform 1 [Pan
troglodytes]
gi|426397737|ref|XP_004065063.1| PREDICTED: high mobility group protein B3 isoform 2 [Gorilla
gorilla gorilla]
gi|119619804|gb|EAW99398.1| high-mobility group box 3, isoform CRA_b [Homo sapiens]
Length = 220
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 97 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 151
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
+++ +EK PY +KA KLK +Y K + Y K D A
Sbjct: 152 NNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGA 189
>gi|50304233|ref|XP_452066.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74636989|sp|Q6CVH3.1|NHP6_KLULA RecName: Full=Non-histone chromosomal protein 6
gi|49641198|emb|CAH02459.1| KLLA0B12056p [Kluyveromyces lactis]
Length = 93
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K+ ++ KKDPN PKR SA+ F E R + ENP +T VG+ G KWK+++ EK
Sbjct: 6 KKTQRKKKDPNAPKRALSAYMFFANENRDIVRAENPGIT-FGQVGRILGEKWKALNEDEK 64
Query: 103 APYESKAEKLKSEY 116
APYE+KAE K Y
Sbjct: 65 APYEAKAEADKKRY 78
>gi|348566777|ref|XP_003469178.1| PREDICTED: high mobility group protein B2-like [Cavia porcellus]
Length = 211
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA K
Sbjct: 93 PNAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAK 151
Query: 112 LKSEYGKKMNAYNKK 126
LK +Y K + AY K
Sbjct: 152 LKEKYEKDIAAYRAK 166
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|254826706|ref|NP_001157151.1| high mobility group protein B3 [Monodelphis domestica]
gi|253756818|gb|ACT35166.1| HmgB3x [Monodelphis domestica]
Length = 201
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGD 130
++S EK PY +KA KLK +Y K + Y K D
Sbjct: 132 NNLSDNEKQPYNNKAAKLKEKYEKDVADYKSKGKFD 167
>gi|395753165|ref|XP_003779555.1| PREDICTED: high mobility group protein B1-like [Pongo abelii]
Length = 215
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KD N PKR PSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDLNAPKRTPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAVKLKEKYEKDIAAYRAKGKPDAA 171
>gi|256080078|ref|XP_002576310.1| structure specific recognition protein [Schistosoma mansoni]
gi|350646026|emb|CCD59303.1| structure specific recognition protein,putative [Schistosoma
mansoni]
Length = 632
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
SKRQ K++KK K DPN P RP SA+F++ E R+ K +V+ V KAAG W++M
Sbjct: 530 SKRQTKKQKKPK-DPNAPTRPLSAYFLWFNENREKIAKNLGGQNSVAEVAKAAGEIWRNM 588
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAY 123
K+ Y+S+ ++LK +Y + + Y
Sbjct: 589 DSTAKSSYQSRVDELKKKYQEDLRIY 614
>gi|444729656|gb|ELW70065.1| High mobility group protein B1 [Tupaia chinensis]
Length = 161
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G+ EKK K DPN PKRPP AFF+F E+ K+E+P+++ + V K G W + +
Sbjct: 82 KGETEKKFK-DPNVPKRPPLAFFLFCSEYHPKIKEEHPDLS-IGDVAKKLGEMWNNTAAD 139
Query: 101 EKAPYESKAEKLKSEYGKKMNAY 123
+K PYE KA KLK +Y K + AY
Sbjct: 140 DKQPYE-KAAKLKEKYEKDIAAY 161
>gi|389626627|ref|XP_003710967.1| non-histone chromosomal protein 6 [Magnaporthe oryzae 70-15]
gi|78192124|gb|ABB30152.1| nonhistone protein 6 [Magnaporthe grisea]
gi|291195731|gb|ADD84582.1| nonhistone chromosomal protein 6B [Magnaporthe oryzae]
gi|351650496|gb|EHA58355.1| non-histone chromosomal protein 6 [Magnaporthe oryzae 70-15]
gi|440463464|gb|ELQ33044.1| nucleosome binding protein [Magnaporthe oryzae Y34]
gi|440481294|gb|ELQ61893.1| nucleosome binding protein [Magnaporthe oryzae P131]
Length = 101
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Query: 36 SGSKRQGKREKK-AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
+ +K+ K EK+ AKKDP PKR SA+ F E R ++ENP VT VGK G +W
Sbjct: 4 AATKKSAKPEKRRAKKDPMAPKRGLSAYMFFANEQRDNVREENPGVT-FGQVGKILGERW 62
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
K++S ++APY++KA K Y + AY D DE+S
Sbjct: 63 KALSDKQRAPYDAKAAADKKRYEDEKAAYQAGGDEDESS 101
>gi|156057705|ref|XP_001594776.1| hypothetical protein SS1G_04584 [Sclerotinia sclerotiorum 1980]
gi|154702369|gb|EDO02108.1| hypothetical protein SS1G_04584 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 554
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
G+KR+ +R K D N P+RPPSA+ +F + R+ K N + T ++ K G W++
Sbjct: 101 GAKRKYRRHPKT--DENAPERPPSAYVIFSNKMREDLKGRNLSFTEIA---KLVGENWQN 155
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
+SPAEK PYE A K K Y ++ Y K Q
Sbjct: 156 LSPAEKEPYEQSAYKAKERYNNELAEYKKTQ 186
>gi|403217000|emb|CCK71495.1| hypothetical protein KNAG_0H00800 [Kazachstania naganishii CBS
8797]
Length = 118
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDPN PKR SA+ F E R K ENPN T +GK G KWK+MS +K
Sbjct: 33 KRVTRKKKDPNAPKRSMSAYMFFANENRDIVKSENPNAT-FGQLGKLLGEKWKNMSTEDK 91
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PY++KA K Y + YN
Sbjct: 92 EPYDAKAAADKKRYESEKELYN 113
>gi|410910282|ref|XP_003968619.1| PREDICTED: high mobility group-T protein-like isoform 1 [Takifugu
rubripes]
Length = 196
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E R K ENP +T + K G W S + EK PY
Sbjct: 85 KKRFKDPNAPKRPPSAFFLFCAELRPKVKSENPGLT-IGDTAKKLGEMWNSKTAEEKQPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
E KA KLK +Y K + AY K D S
Sbjct: 144 EKKAAKLKEKYDKDIVAYRTKGKVDSES 171
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P+ + A K +WK+MSP EK +E
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y ++M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|392300930|gb|EIW12019.1| Nhp6bp [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 162
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDPN PKR SA+ F E R + ENP+VT VG+ G +WK+++ EK
Sbjct: 78 KRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVT-FGQVGRILGERWKALTAEEK 136
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PYESKA+ K Y + YN
Sbjct: 137 QPYESKAQADKKRYESEKELYN 158
>gi|402077455|gb|EJT72804.1| non-histone chromosomal protein 6 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 101
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
++ KKDP PKR SA+ F E R+ ++ENP V+ VGK G +WK++S ++APY
Sbjct: 15 RRGKKDPLAPKRGLSAYMFFANEQRENVREENPGVS-FGQVGKILGERWKALSDKQRAPY 73
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
++KA K Y + AYN D DE+S
Sbjct: 74 DAKAAADKKRYEDEKAAYNAGGDEDESS 101
>gi|62638360|ref|XP_574279.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|109460525|ref|XP_001074365.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
Length = 209
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K EY K + AY K
Sbjct: 152 KEEYEKDIAAYRAK 165
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ K ++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKNKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|448530095|ref|XP_003869985.1| Nhp6a non-histone chromatin component [Candida orthopsilosis Co
90-125]
gi|354547725|emb|CCE44460.1| hypothetical protein CPAR2_402610 [Candida parapsilosis]
gi|380354339|emb|CCG23854.1| Nhp6a non-histone chromatin component [Candida orthopsilosis]
Length = 93
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
G KR+ R+KK DP+ PKR SA+ F E R + ENP ++ VGKA G KWK+
Sbjct: 5 GEKRKVSRKKK---DPDAPKRSLSAYMFFANENRDIVRAENPGIS-FGQVGKALGDKWKA 60
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
+S +K PYE+KAE K Y K+ Y KK
Sbjct: 61 LSAEDKVPYENKAEADKKRYEKEKAEYAKK 90
>gi|195627962|gb|ACG35811.1| HMG1/2-like protein [Zea mays]
Length = 123
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 64/103 (62%), Gaps = 8/103 (7%)
Query: 56 KRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSE 115
KR + FF FL EFR + +++P + V V KAAG KW+SMS EKA Y S ++K +
Sbjct: 20 KRGLTPFFAFLAEFRPQYLEKHPELKGVKEVSKAAGEKWRSMSDEEKAKYGS-SKKQDGK 78
Query: 116 YGKKMNAYNKK-----QDGDEA--SDKSKSEVNDEDEASGEEE 151
KK N +KK ++GDEA S+KSKSEV D+++ E+E
Sbjct: 79 ASKKENTSSKKAKADIREGDEAEGSNKSKSEVEDDEQDGNEDE 121
>gi|12838247|dbj|BAB24141.1| unnamed protein product [Mus musculus]
Length = 181
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR K+ K+DP P++PPS+F +F + K+ENP+ T V V KAAG W + AE
Sbjct: 80 GKRRKRRKRDPKAPRKPPSSFLLFSRDHYAMLKQENPDWTVVQ-VAKAAGKMWSTTDEAE 138
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKKQDG 129
K PYE KA ++++Y ++ AY + G
Sbjct: 139 KKPYEQKAALMRAKYFEEQEAYRNQCQG 166
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KD +PK S++ F+ FR FK++ PN + KW+S+S EKA YE+
Sbjct: 4 KDQLRPKVNVSSYIHFMLNFRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEAL 63
Query: 109 AEKLKSEYGKKMNAY 123
AE K+ Y ++M Y
Sbjct: 64 AEHDKARYQQEMMNY 78
>gi|365982187|ref|XP_003667927.1| hypothetical protein NDAI_0A05290 [Naumovozyma dairenensis CBS 421]
gi|343766693|emb|CCD22684.1| hypothetical protein NDAI_0A05290 [Naumovozyma dairenensis CBS 421]
Length = 93
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
+R + KKDPN PKR SA+ F + R K ENPN+T +GK G KWK ++ EK
Sbjct: 9 RRVVRRKKDPNAPKRGLSAYMFFANDNRDIVKAENPNIT-FGQIGKVLGAKWKELNDEEK 67
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PY+ KA+ K Y + YN
Sbjct: 68 QPYQDKADADKKRYESEKELYN 89
>gi|344252855|gb|EGW08959.1| TRAF family member-associated NF-kappa-B activator [Cricetulus
griseus]
Length = 427
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R FK E+P + ++ V K G W + + +K PY
Sbjct: 299 KKKFKDPNAPKRPPSAFFLFCSEYRPKFKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPY 357
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK ++ K + AY K D A
Sbjct: 358 EKKAAKLKEKHEKDIAAYRAKGKPDAA 384
>gi|410256408|gb|JAA16171.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+ PKRPPS FF+F E R K NP ++ V V K G W +++ +EK PY +KA
Sbjct: 89 DPSAPKRPPSGFFLFSSEIRPKIKSTNPGIS-VGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKKQDGDEA 132
KLK +Y K + Y K D A
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|226443200|ref|NP_001140081.1| High mobility group-T protein [Salmo salar]
gi|223649418|gb|ACN11467.1| High mobility group-T protein [Salmo salar]
Length = 345
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRP SAFF+F +FR K E P + ++ V K G KW +++ +K PY
Sbjct: 227 KKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGL-SIGDVAKKLGEKWNNLTAEDKVPY 285
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 286 EKKAAKLKEKYEKDITAYRNK 306
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +WK+MS EK +E
Sbjct: 145 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 204
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 205 AKLDKVRYEREMRSY 219
>gi|171848939|pdb|2YQI|A Chain A, Solution Structure Of The Second Hmg-Box Domain From High
Mobility Group Protein B3
Length = 81
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPS FF+F EFR K NP ++ + V K G W +++ +EK PY +KA KL
Sbjct: 8 NAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPYITKAAKL 66
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + Y K
Sbjct: 67 KEKYEKDVADYKSK 80
>gi|162460188|ref|NP_001105108.1| nucleosome/chromatin assembly factor D [Zea mays]
gi|4995921|emb|CAB44297.1| HMG1 protein [Zea mays]
Length = 123
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 64/103 (62%), Gaps = 8/103 (7%)
Query: 56 KRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSE 115
KR + FF FL EFR + +++P + V V KAAG KW+SMS EKA Y S ++K +
Sbjct: 20 KRGLTPFFAFLAEFRPQYLEKHPELKGVKEVSKAAGEKWRSMSDEEKAKYGS-SKKQDGK 78
Query: 116 YGKKMNAYNKK-----QDGDEA--SDKSKSEVNDEDEASGEEE 151
KK N +KK ++GDEA S+KSKSEV D+++ E+E
Sbjct: 79 ASKKENTSSKKAKADVREGDEAEGSNKSKSEVEDDEQDGNEDE 121
>gi|357517687|ref|XP_003629132.1| HMG1/2-like protein [Medicago truncatula]
gi|355523154|gb|AET03608.1| HMG1/2-like protein [Medicago truncatula]
Length = 75
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 44/57 (77%), Gaps = 5/57 (8%)
Query: 35 DSGSKRQG-----KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAV 86
D+ KR+G K+ KKA KDPNKPKRPPSAFFVF+ +FR+ +KK++PN +V+A+
Sbjct: 12 DNRLKRKGAGAGRKQTKKAAKDPNKPKRPPSAFFVFMSDFREQYKKDHPNNKSVAAL 68
>gi|397475678|ref|XP_003809257.1| PREDICTED: high mobility group protein B3-like [Pan paniscus]
Length = 165
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+ PKRPPS FF+F E R K NP ++ V V K G W +++ +EK PY +KA
Sbjct: 66 DPSAPKRPPSGFFLFSSEIRPKIKSTNPGIS-VGDVAKKLGEMWNNLNDSEKQPYITKAA 124
Query: 111 KLKSEY 116
KLK +Y
Sbjct: 125 KLKEKY 130
>gi|90103305|gb|ABD85497.1| high mobility group box 1-like [Ictalurus punctatus]
Length = 182
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K+E P ++ + V K G W S EK PY
Sbjct: 66 KKRFKDPNAPKRPPSAFFIFCAEYRPKVKEETPGLS-IGDVAKKLGEMWNKTSAEEKQPY 124
Query: 106 ESKAEKLKSEYGKKMNAYNK 125
E KA KLK +Y K + AY K
Sbjct: 125 EKKAAKLKEKYEKDIAAYRK 144
>gi|400599237|gb|EJP66941.1| HMG box protein [Beauveria bassiana ARSEF 2860]
Length = 96
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+AKKDPN PKR SA+ F E R+ ++ENP V+ VGK G +WK++S ++ PY
Sbjct: 17 KRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVS-FGQVGKILGERWKALSDKQRTPY 75
Query: 106 ESKAEKLKSEYGKKMNAYN 124
E+KA K Y + AYN
Sbjct: 76 EAKAAADKKRYEDEKAAYN 94
>gi|297813579|ref|XP_002874673.1| hypothetical protein ARALYDRAFT_489947 [Arabidopsis lyrata subsp.
lyrata]
gi|297320510|gb|EFH50932.1| hypothetical protein ARALYDRAFT_489947 [Arabidopsis lyrata subsp.
lyrata]
Length = 448
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 7/113 (6%)
Query: 14 QEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKK-DPNKPKRPPSAFFVFLEEFRKT 72
QEAL+ + K+K T + +K K +KK +K DPNKPK+P S++F+F +E RK+
Sbjct: 337 QEALQ-----LLKKKEKTDNIIKKTKEMTKNKKKNEKVDPNKPKKPASSYFLFCKEARKS 391
Query: 73 FKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+E+P + S V KWK + EK Y KA +L Y K++ YNK
Sbjct: 392 VLEEHPGINN-STVTAHISLKWKELGEEEKQVYNGKAAELMEAYKKEVEEYNK 443
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPK P SA+ ++ E R K EN +V V K G +WK++S +KAPY+ A+
Sbjct: 244 DPLKPKHPISAYLIYANERRAALKGENKSVIEV---AKMTGEEWKNLSEEQKAPYDQMAK 300
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDK 135
K K Y ++M Y ++ + S K
Sbjct: 301 KKKEIYLQEMEGYKITKEEETMSQK 325
>gi|444730527|gb|ELW70909.1| High mobility group protein B1 [Tupaia chinensis]
Length = 238
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPP AFF+F E+R + E+P ++ + K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPLAFFLFCSEYRPKIEGEHPGLS-IGDTAKKLGELWNNTAANDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E +A KLK +Y K + AY K D A
Sbjct: 145 EKEAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ + KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCWEEHKKKHPDASVNFSEFSKKCSERWKAMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKVDKTRYEREMKTY 78
>gi|407926962|gb|EKG19868.1| High mobility group HMG1/HMG2 [Macrophomina phaseolina MS6]
Length = 106
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
Query: 30 ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA 89
T++ SK GK+ KKDPN PKR SA+ F + R ++ENP + VGK
Sbjct: 6 TTSRKTKASKADGKK----KKDPNAPKRGLSAYMFFANDMRDKVREENPGIK-FGEVGKI 60
Query: 90 AGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDG-DEASD 134
G +WK++S ++APYE+KA K Y + AYN D DEAS+
Sbjct: 61 LGERWKALSEKQRAPYEAKAANDKKRYEDEKAAYNAGGDDEDEASE 106
>gi|355762621|gb|EHH62030.1| hypothetical protein EGM_20207 [Macaca fascicularis]
Length = 201
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVPKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
+++ +EK PY +KA KLK +Y K + Y K D A
Sbjct: 132 NNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGA 169
>gi|378727181|gb|EHY53640.1| non-histone chromosomal protein 6 [Exophiala dermatitidis
NIH/UT8656]
Length = 102
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 5/97 (5%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
SK +G+ EKK KKDPN PKR SA+ F E R++ ++ENP ++ VGK G +WK++
Sbjct: 8 SKTKGRGEKK-KKDPNAPKRGLSAYMFFANEQRESVREENPGIS-FGQVGKVLGDRWKAL 65
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEASD 134
+ ++ PYE KA+ K Y + Y Q G +ASD
Sbjct: 66 NEKQREPYEKKAQADKKRYEDEKAKY---QAGGDASD 99
>gi|313224350|emb|CBY20139.1| unnamed protein product [Oikopleura dioica]
Length = 91
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
+AKKDPN PKRP +AFF+F + R KK P + VS V K G WK + K Y+
Sbjct: 3 RAKKDPNAPKRPQTAFFLFAADNRADAKKCLPEGSRVSEVAKKLGVMWKEVDAKTKEKYQ 62
Query: 107 SKAEKLKSEYGKKMNAYNKKQ 127
S+AE+ K++Y ++M AY Q
Sbjct: 63 SQAEENKAKYAEEMEAYRNSQ 83
>gi|169409528|gb|ACA57879.1| High mobility group protein B3 (predicted) [Callicebus moloch]
Length = 193
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K N ++ + V K G W +++ ++K PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNLGIS-IGDVAKKLGEMWNNLNDSKKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKKQDGD 130
KLK +Y K + Y K D
Sbjct: 148 KLKEKYEKDVADYKSKGKFD 167
>gi|239606992|gb|EEQ83979.1| nucleosome binding protein [Ajellomyces dermatitidis ER-3]
Length = 105
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R +K KKDPN PKR SA+ F E R ++ENP ++ VGK G +WK+++ ++A
Sbjct: 13 RGEKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGIS-FGQVGKVLGERWKALNEKQRA 71
Query: 104 PYESKAEKLKSEYGKKMNAYN---KKQDGDEAS 133
PYE+KA K Y + +YN K QD D+ S
Sbjct: 72 PYEAKAAADKKRYEDEKASYNARRKAQDDDDES 104
>gi|346324407|gb|EGX94004.1| nucleosome binding protein [Cordyceps militaris CM01]
Length = 96
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+AKKDPN PKR SA+ F E R ++ENP V+ VGK G +WK++S ++ PY
Sbjct: 17 KRAKKDPNAPKRGLSAYMFFANEQRDNVREENPGVS-FGQVGKILGERWKALSEKQRVPY 75
Query: 106 ESKAEKLKSEYGKKMNAYN 124
E+KA K Y + AYN
Sbjct: 76 EAKAAADKKRYEDEKAAYN 94
>gi|440298682|gb|ELP91313.1| hypothetical protein EIN_153200 [Entamoeba invadens IP1]
Length = 185
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPK+P +A+ ++L E R K++ P++ V+ V K AG WK+M +K PY+ KA+
Sbjct: 96 DPNKPKKPQTAYMLYLNEHRAEIKEKFPDM-KVTEVAKKAGENWKAMGEEDKKPYQDKAD 154
Query: 111 KLKSEYGKKMNAYNKKQDG 129
K K + +M Y +K+DG
Sbjct: 155 KAKETWKTEMKKYEEKKDG 173
>gi|307105669|gb|EFN53917.1| hypothetical protein CHLNCDRAFT_136125 [Chlorella variabilis]
Length = 101
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRP SA+ F + R KK +P+++ + VGKA G WK +S EK PY+ KA+
Sbjct: 27 DPNAPKRPLSAYMYFASDKRVEMKKSDPSLS-LGEVGKATGAAWKELSDKEKEPYQKKAD 85
Query: 111 KLKSEYGKKMNAYNKK 126
K K+ Y K+ AY KK
Sbjct: 86 KDKARYEKEKAAYEKK 101
>gi|403295709|ref|XP_003938773.1| PREDICTED: high mobility group protein B2 [Saimiri boliviensis
boliviensis]
Length = 158
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 42 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 100
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 101 KEKYEKDIAAYRAK 114
>gi|384246550|gb|EIE20040.1| hypothetical protein COCSUDRAFT_83556 [Coccomyxa subellipsoidea
C-169]
Length = 140
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
++AKK + P+RP SA+ F+ EFR+ +K ++P V VS VG AAG W+S++P +KA Y
Sbjct: 11 RRAKKPKDAPRRPKSAYMFFMAEFREKWKVDHPEVNRVSDVGVAAGEAWRSLTPEQKAVY 70
Query: 106 ESKAEKLKSEYGKKMNAY 123
E ++ K+ Y ++ Y
Sbjct: 71 EEQSVGSKATYAAEIAEY 88
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
Query: 39 KRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV 80
KRQ RE P + +RP SA+F FL FR FK++NP
Sbjct: 98 KRQRSRE------PGQLRRPTSAYFFFLNTFRDAFKEDNPGT 133
>gi|119588737|gb|EAW68331.1| hCG1991922, isoform CRA_a [Homo sapiens]
gi|119588738|gb|EAW68332.1| hCG1991922, isoform CRA_a [Homo sapiens]
Length = 188
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF++ E+ K E P ++ V K G W + + +K PY
Sbjct: 35 KKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLS-FGDVAKKLGEMWNNTAADDKQPY 93
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEASD 134
E ++ KLK +Y K + AY K D A++
Sbjct: 94 EKRSAKLKEKYEKDIAAYRAKGKHDAANN 122
>gi|395847762|ref|XP_003796535.1| PREDICTED: high mobility group protein B3-like [Otolemur garnettii]
Length = 255
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + GK KKDPN P RPPS F +F EF K NP ++ + V K W
Sbjct: 101 DYGLAKGGK-----KKDPNAPTRPPSGFCLFCSEFHPKIKSTNPGIS-IGDVAKKLSEMW 154
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
++S +EK PY +KA +L+ +Y K + Y K D A
Sbjct: 155 SNLSGSEKQPYITKAAQLREKYEKDVADYKSKGKFDGA 192
>gi|401623234|gb|EJS41340.1| nhp6ap [Saccharomyces arboricola H-6]
Length = 93
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R + ENP++T VGK G KWK+++P EK PYE+KA+
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDIT-FGQVGKKLGEKWKALTPEEKLPYEAKAQ 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|392877702|gb|AFM87683.1| high mobility group box 3 [Callorhinchus milii]
Length = 203
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKRPPS FF+F + R K +P +T + V K G W + EK PY
Sbjct: 85 KKKKDPNAPKRPPSGFFLFCSDHRPKIKAGSPGLT-IGDVAKKLGELWNGCTDEEKKPYN 143
Query: 107 SKAEKLKSEYGKKMNAYNKK 126
+KA KLK +Y K + Y K
Sbjct: 144 AKAAKLKEKYEKDVADYRTK 163
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
AK+DP KP+ S++ F++ R+ KK+NP+V S K +WK+MS EK+ +E
Sbjct: 2 AKRDPKKPRGKMSSYAYFVQTCREEHKKKNPDVPVNFSDFSKRCSERWKTMSGKEKSKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 DLAKVDKVRYDREMKTY 78
>gi|237845111|ref|XP_002371853.1| high mobility group protein [Toxoplasma gondii ME49]
gi|211969517|gb|EEB04713.1| high mobility group protein [Toxoplasma gondii ME49]
gi|221480801|gb|EEE19228.1| high mobility group protein, putative [Toxoplasma gondii GT1]
gi|221501467|gb|EEE27242.1| high mobility group protein, putative [Toxoplasma gondii VEG]
Length = 302
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 8/109 (7%)
Query: 25 GKRKAATA------KLDSGS-KRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKEN 77
GK +AA +L++ + K+ ++ KAKKDPN PKRP SAF F ++ R+ ++N
Sbjct: 191 GKHQAAACCYPWWNRLNTMAPKKTIVKKTKAKKDPNAPKRPLSAFIFFSKDKREEIIRKN 250
Query: 78 PNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
P + + ++ VGK G W +S A+K PYESKA K+ Y ++M AY K
Sbjct: 251 PELKSKLAEVGKMVGEAWGKLSDAQKKPYESKAVADKARYEREMIAYKK 299
>gi|444729825|gb|ELW70228.1| High mobility group protein B1 [Tupaia chinensis]
Length = 141
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDP+ PKRPPSAFF+F E+R K E P + V K G W + + K PY
Sbjct: 24 KKKFKDPSAPKRPPSAFFLFCSEYRPEIKGERPG-RFIGDVAKRLGEMWNNTAADGKQPY 82
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E A KLK +Y K + AY K D A
Sbjct: 83 EKNAAKLKGKYEKDIAAYRAKGKPDAA 109
>gi|403222987|dbj|BAM41118.1| high-mobility-group protein [Theileria orientalis strain Shintoku]
Length = 93
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKW 94
S S ++GKR KKDPN PKR S++ F +E R KENP++ V+ VGK G W
Sbjct: 6 SKSAKKGKR---TKKDPNAPKRALSSYMFFAKEKRNELIKENPDLAKDVATVGKLVGAAW 62
Query: 95 KSMSPAEKAPYESKAE 110
S+ +EKAPYE AE
Sbjct: 63 NSLDDSEKAPYEKLAE 78
>gi|290986470|ref|XP_002675947.1| predicted protein [Naegleria gruberi]
gi|284089546|gb|EFC43203.1| predicted protein [Naegleria gruberi]
Length = 215
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
D N PKRP S++ +F + +RK+ ENP + V+ V K G KW M+ AEKAPY +KA
Sbjct: 116 DENAPKRPLSSYMLFSQTYRKSLVAENPTLK-VTEVAKLVGEKWGKMNDAEKAPYVNKAA 174
Query: 111 KLKSEYGKKMNAYNKKQ 127
+LK+ Y + + Y+ Q
Sbjct: 175 ELKAAYNIEKSKYDATQ 191
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKE--NPNVTAVSAVGKAAGGKWKSMSP 99
GK+ K KKDPN PKRP + FF+F +E R+ K + S V K G +W ++
Sbjct: 3 GKKSSK-KKDPNAPKRPKTGFFLFCDERREKVKATLGEGEKKSASEVSKLLGEEWGKLTD 61
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYNK 125
+EK Y S ++K Y K+ Y K
Sbjct: 62 SEKDKYNSVSKKNMEVYKKQFEEYKK 87
>gi|326437020|gb|EGD82590.1| hypothetical protein PTSG_03243 [Salpingoeca sp. ATCC 50818]
Length = 210
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G R +K KKDPN PK+P SA+FVF E R + + P VS K G +W+ M+
Sbjct: 124 EGGRRRKKKKDPNAPKKPKSAYFVFAETRRDALRAQYPE-DRVSDTAKRTGEEWRGMTEE 182
Query: 101 EKAPYESKAEKLKSEYGKKMNAY 123
+K P++ KA++LK EY + + Y
Sbjct: 183 QKRPFQLKAQELKQEYDQAVAEY 205
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKP+ + + F +E R +++PN + V+ V K G +W+ ++ +K PY A
Sbjct: 45 DPNKPRGALTPYMCFNKEVRPAIMQQHPNAS-VTEVAKLIGAQWRQLTDEQKKPYNDMAR 103
Query: 111 KLKSEYGKKMNAY 123
+ Y + M Y
Sbjct: 104 TDRERYKEAMKNY 116
>gi|170585494|ref|XP_001897518.1| HMG box family protein [Brugia malayi]
gi|158595065|gb|EDP33640.1| HMG box family protein [Brugia malayi]
Length = 364
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 21/135 (15%)
Query: 30 ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA 89
T ++ S + R+ R+K+ KKDPN+P++P SA+ +F + + T K +PN + V K
Sbjct: 79 TTNQVTSRTSRRTIRKKRPKKDPNEPQKPVSAYALFFRDTQATIKGRSPN-ASFGEVSKI 137
Query: 90 AGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKSKSEVNDEDEASGE 149
W S+ K+ Y+ + E K +Y KK+ AY +Q ++E G
Sbjct: 138 VASMWDSLDYHAKSLYKQRTEMAKKDYLKKLAAYRAQQIS-------------QNETVG- 183
Query: 150 EEHQLEPEPEPEQDE 164
P PEPE++E
Sbjct: 184 ------PVPEPEKEE 192
>gi|344235655|gb|EGV91758.1| High mobility group protein B2 [Cricetulus griseus]
Length = 159
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 42 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 100
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 101 KEKYEKDIAAYRAK 114
>gi|302309760|ref|XP_002999554.1| hypothetical protein [Candida glabrata CBS 138]
gi|196049084|emb|CAR57991.1| unnamed protein product [Candida glabrata]
Length = 93
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
++ + KKDPN PKR SA+ F E R + ENP+VT +G+ G +WK+++ +K
Sbjct: 9 RKTTRRKKDPNAPKRALSAYMFFANENRDIVRSENPDVT-FGQIGRLLGERWKALTAEDK 67
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PYE+KAE K Y + YN
Sbjct: 68 QPYEAKAEADKKRYESEKELYN 89
>gi|414585862|tpg|DAA36433.1| TPA: HMG1 protein [Zea mays]
Length = 123
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 6/102 (5%)
Query: 56 KRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY------ESKA 109
KR + FF FL EFR + +++P + V V KAAG KW+SMS EKA Y + KA
Sbjct: 20 KRGLTPFFAFLAEFRPQYLEKHPELKGVKEVSKAAGEKWRSMSDEEKAKYGGSKKQDGKA 79
Query: 110 EKLKSEYGKKMNAYNKKQDGDEASDKSKSEVNDEDEASGEEE 151
K ++ KK A ++ D E S+KSKSEV D+++ E+E
Sbjct: 80 SKKENTSSKKAKADVREGDEAEGSNKSKSEVEDDEQDGNEDE 121
>gi|380476672|emb|CCF44585.1| non-histone chromosomal protein 6 [Colletotrichum higginsianum]
Length = 96
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+AKKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK+++ ++ PY
Sbjct: 17 KRAKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKILGERWKALNEKQRQPY 75
Query: 106 ESKAEKLKSEYGKKMNAYN 124
E+KA K Y + AYN
Sbjct: 76 EAKAATDKKRYEDEKQAYN 94
>gi|6435676|pdb|1CG7|A Chain A, Hmg Protein Nhp6a From Saccharomyces Cerevisiae
Length = 93
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R + ENP++T VGK G KWK+++P EK PYE+KA+
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDIT-FGQVGKKLGEKWKALTPEEKQPYEAKAQ 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|440631791|gb|ELR01710.1| non-histone chromosomal protein 6 [Geomyces destructans 20631-21]
Length = 101
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R +K KKDPN PKR SA+ F +E R ++ENP ++ VGK G +WK+++ ++
Sbjct: 14 RGEKKKKDPNAPKRGLSAYMFFAQEQRDNVREENPGIS-FGQVGKVLGERWKALNDKQRT 72
Query: 104 PYESKAEKLKSEYGKKMNAYN 124
PYE+KA++ K Y + +YN
Sbjct: 73 PYETKAQEDKKRYEDEKASYN 93
>gi|32335|emb|CAA78938.1| HMG2B [Homo sapiens]
Length = 186
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 70 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 128
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 129 KEKYEKDIAAYGAK 142
>gi|388857490|emb|CCF48846.1| uncharacterized protein [Ustilago hordei]
Length = 292
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 10/109 (9%)
Query: 16 ALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKK 75
AL P+D + ++ A A K++G + +DP KPKRP SAFF FL + R +
Sbjct: 187 ALSPDD--IKRQNAYIA----SQKKKGIKGTAFLRDPAKPKRPNSAFFEFLNDLRAR-ET 239
Query: 76 ENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYN 124
PN+T S K G +WK M+P +KAPYE +A +Y + + YN
Sbjct: 240 VIPNITEFS---KRGGERWKQMAPEQKAPYEQRALHALEQYKRDLEIYN 285
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 18/96 (18%)
Query: 60 SAFFVFLEE----------FRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
S+F +++ E ++KT K V + + KA G +W ++P KA YE++
Sbjct: 111 SSFLIYMSERVAQLKGEPLYQKTSPKTGAQVVDIVKMAKAVGAEWAQLAPQLKARYEAQH 170
Query: 110 EKLKSEYGKKMNAYN--------KKQDGDEASDKSK 137
E+ K +Y + + + K+Q+ AS K K
Sbjct: 171 EQEKEQYERALAEWKAALSPDDIKRQNAYIASQKKK 206
>gi|361127235|gb|EHK99210.1| putative Non-histone chromosomal protein 6 [Glarea lozoyensis
74030]
Length = 100
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
++ KR +K KKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK++S
Sbjct: 8 KRAKRTEKKKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKVLGERWKALSD 66
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
++ PY +KA+ K Y ++ YN + +E+S
Sbjct: 67 TQRKPYAAKADADKIRYEEEKANYNADAEEEESS 100
>gi|170097113|ref|XP_001879776.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645179|gb|EDR09427.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 114
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 65/126 (51%), Gaps = 17/126 (13%)
Query: 12 VSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRK 71
+ +EA KP KRKAA K D + R+GK KDPNKPKR SA+ F +++R
Sbjct: 1 MPKEATKP------KRKAAE-KADKATSRKGK------KDPNKPKRALSAYMFFSQDWRD 47
Query: 72 TFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYN---KKQD 128
K ENP+ VGK G KWK + EK PY +A K K+ + AY+ K
Sbjct: 48 RIKAENPDA-GFGEVGKLLGAKWKELDEEEKKPYVEQASKDKTRAEEAKAAYDSNKKSAS 106
Query: 129 GDEASD 134
GDE D
Sbjct: 107 GDEEED 112
>gi|151942838|gb|EDN61184.1| nonhistone chromosomal protein [Saccharomyces cerevisiae YJM789]
gi|190407991|gb|EDV11256.1| 11 kDa nonhistone chromosomal protein [Saccharomyces cerevisiae
RM11-1a]
gi|256268928|gb|EEU04275.1| Nhp6ap [Saccharomyces cerevisiae JAY291]
gi|259150205|emb|CAY87008.1| Nhp6ap [Saccharomyces cerevisiae EC1118]
gi|349581863|dbj|GAA27020.1| K7_Nhp6ap [Saccharomyces cerevisiae Kyokai no. 7]
Length = 93
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R + ENP++T VGK G KWK+++P EK PYE+KA+
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDIT-FGQVGKKLGEKWKALTPEEKQPYEAKAQ 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|401839076|gb|EJT42436.1| NHP6A-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 93
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R + ENP++T VGK G KWK+++P EK PYE+KA+
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDIT-FGQVGKKLGEKWKALTPEEKQPYEAKAQ 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|118344004|ref|NP_001071827.1| FACT complex subunit SSRP1 [Ciona intestinalis]
gi|110287972|sp|Q4H2R2.1|SSRP1_CIOIN RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Structure-specific recognition protein 1
gi|70571284|dbj|BAE06715.1| transcription factor protein [Ciona intestinalis]
Length = 704
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+ KKDPN PKRP SA+F++L E R FK EN + +V+ + K AG +WK + P EK +
Sbjct: 545 KRKKKDPNAPKRPQSAYFLWLNENRGRFKAENKGI-SVTELTKLAGKEWKKIDPDEKQKF 603
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
E +K K ++ M Y K Q G S
Sbjct: 604 ERMYQKSKVKFDAAMKEY-KSQGGGRTS 630
>gi|387914026|gb|AFK10622.1| high mobility group box 3 [Callorhinchus milii]
Length = 210
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKRPPS FF+F + R K +P +T + V K G W + EK PY
Sbjct: 92 KKKKDPNAPKRPPSGFFLFCSDHRPKIKAGSPGLT-IGDVAKKLGELWNGCTDEEKKPYN 150
Query: 107 SKAEKLKSEYGKKMNAY 123
+KA KLK +Y K + Y
Sbjct: 151 AKAAKLKEKYEKDVADY 167
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAE 101
K K AK+DP KP+ S++ F++ R+ KK+NP+V S K +WK+MS E
Sbjct: 4 KITKMAKRDPKKPRGKMSSYAYFVQTCREEHKKKNPDVPVNFSDFSKRCSERWKTMSGKE 63
Query: 102 KAPYESKAEKLKSEYGKKMNAY 123
K+ +E A+ K Y ++M Y
Sbjct: 64 KSKFEDLAKVDKVRYDREMKTY 85
>gi|344248925|gb|EGW05029.1| hypothetical protein I79_015964 [Cricetulus griseus]
Length = 164
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAF +F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 36 KKKFKDPNAPKRPPSAF-LFCSEYRPKTKGEHPGLS-LGDVAKKLGEMWNNTAAGDKQPY 93
Query: 106 ESKAEKLKSEYGKKMNAY 123
E KA KLK +Y K + AY
Sbjct: 94 EKKAAKLKEQYEKDIAAY 111
>gi|328856362|gb|EGG05484.1| hypothetical protein MELLADRAFT_31192 [Melampsora larici-populina
98AG31]
Length = 82
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR K +KDPN PKRP SA+ F +++R+ K ENP V+ +G+ G KWKS+ EK
Sbjct: 1 KRRVKREKDPNAPKRPLSAYMFFSQDWRERIKTENPEVS-FGEIGRLLGLKWKSLGEEEK 59
Query: 103 APYESKA 109
PYE A
Sbjct: 60 KPYEDMA 66
>gi|171680363|ref|XP_001905127.1| hypothetical protein [Podospora anserina S mat+]
gi|170939808|emb|CAP65034.1| unnamed protein product [Podospora anserina S mat+]
Length = 98
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
+ KKDPN PKR SA+ F E R+ ++ENP V+ VGK G +WK++S ++APYE
Sbjct: 18 RGKKDPNAPKRGLSAYMFFANEQRENVREENPGVS-FGQVGKILGERWKALSDKQRAPYE 76
Query: 107 SKAEKLKSEYGKKMNAYN 124
+KA K Y + AYN
Sbjct: 77 AKAAADKKRYEDEKQAYN 94
>gi|331220978|ref|XP_003323164.1| high mobility group protein B1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309302154|gb|EFP78745.1| high mobility group protein B1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 106
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 33 KLDS-GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
KLD G+ + KR KK +KDPN PKRP SA+ F +++R+ K ENP+V+ +G+ G
Sbjct: 14 KLDCDGNPVKTKRVKK-EKDPNAPKRPLSAYMYFSQDWRERIKTENPDVS-FGEIGRLLG 71
Query: 92 GKWKSMSPAEKAPYESKAEK 111
KWK +S EK PYE A +
Sbjct: 72 LKWKGLSEEEKKPYEDMASR 91
>gi|6325309|ref|NP_015377.1| Nhp6ap [Saccharomyces cerevisiae S288c]
gi|128182|sp|P11632.1|NHP6A_YEAST RecName: Full=Non-histone chromosomal protein 6A
gi|24987379|pdb|1J5N|A Chain A, Solution Structure Of The Non-Sequence-Specific Hmgb
Protein Nhp6a In Complex With Sry Dna
gi|24987655|pdb|1LWM|A Chain A, Solution Structure Of The Sequence-Non-Specific Hmgb
Protein Nhp6a
gi|4034|emb|CAA33377.1| unnamed protein product [Saccharomyces cerevisiae]
gi|171883|gb|AAA34754.1| high mobility group non-histone protein [Saccharomyces cerevisiae]
gi|805034|emb|CAA89171.1| Nhp6ap [Saccharomyces cerevisiae]
gi|1314122|emb|CAA94998.1| Nhp6ap [Saccharomyces cerevisiae]
gi|51013911|gb|AAT93249.1| YPR052C [Saccharomyces cerevisiae]
gi|285815583|tpg|DAA11475.1| TPA: Nhp6ap [Saccharomyces cerevisiae S288c]
gi|392296063|gb|EIW07166.1| Nhp6ap [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 93
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R + ENP++T VGK G KWK+++P EK PYE+KA+
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDIT-FGQVGKKLGEKWKALTPEEKQPYEAKAQ 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|168021929|ref|XP_001763493.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685286|gb|EDQ71682.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP +PK P SAFF F + R +EN VT + K G +WKSMSP+++AP+E A
Sbjct: 259 DPLRPKHPISAFFAFSQSRRPALLEENKPVTEI---AKILGEEWKSMSPSKRAPFEEIAA 315
Query: 111 KLKSEYGKKMNAYNKKQDGD------EASDKSKSE 139
K K Y ++ Y K + D EA +KSK E
Sbjct: 316 KEKERYSVELETYKKNKAEDLSTLDREAEEKSKLE 350
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
+ K+P +AF ++ +++R+ +ENPN T + + G KWK++ E+ PYE + + K
Sbjct: 143 RLKKPKTAFLLWCKDYRQKVCEENPNAT-FAEISTILGDKWKNVPEEERKPYEDRYKVEK 201
Query: 114 SEYGK 118
+ Y K
Sbjct: 202 NVYLK 206
>gi|444724258|gb|ELW64868.1| High mobility group protein B1 [Tupaia chinensis]
Length = 140
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK K PN KRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 24 KKKFKGPNAAKRPPSAFFLFCSEYRPKIKGEHPGLS-IGGVAKKLGEVWNNTAADDKQPY 82
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E K KLK +Y K + AY K D A
Sbjct: 83 EKKPAKLKEKYEKDIAAYPDKGKPDAA 109
>gi|388582419|gb|EIM22724.1| hypothetical protein WALSEDRAFT_53977 [Wallemia sebi CBS 633.66]
Length = 137
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 33 KLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGG 92
K D+ + K+ K KKD N PKR SA+ +E R KKENPN++ VGK G
Sbjct: 3 KADTKPRANTKKAAKPKKDENAPKRALSAYMYMSQEHRAEVKKENPNIS-FGEVGKVLGA 61
Query: 93 KWKSMSPAEKAPYESKA 109
KWK MS EK PYE +A
Sbjct: 62 KWKEMSAEEKKPYEEQA 78
>gi|336465411|gb|EGO53651.1| hypothetical protein NEUTE1DRAFT_106544 [Neurospora tetrasperma
FGSC 2508]
gi|350295304|gb|EGZ76281.1| hypothetical protein NEUTE2DRAFT_122932 [Neurospora tetrasperma
FGSC 2509]
Length = 592
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
+KR+ +R KA D N P+RPPSA+ +F + R+ K N + T ++ K G W+++
Sbjct: 109 TKRKYRRHPKA--DENAPERPPSAYVLFSNKMREDLKGRNLSFTEIA---KLVGENWQNL 163
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+PAEK PYESKA+ K +Y ++ Y K
Sbjct: 164 TPAEKEPYESKAQAYKEKYHAELAEYKK 191
>gi|336274626|ref|XP_003352067.1| hypothetical protein SMAC_00615 [Sordaria macrospora k-hell]
gi|380096352|emb|CCC06400.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 595
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
+KR+ +R KA D N P+RPPSA+ +F + R+ K N + T ++ K G W+++
Sbjct: 105 TKRKYRRHPKA--DENAPERPPSAYVLFSNKMREDLKGRNLSFTEIA---KLVGENWQNL 159
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+PAEK PYESKA+ K +Y ++ Y K
Sbjct: 160 TPAEKEPYESKAQAYKEKYHAELAEYKK 187
>gi|354470970|ref|XP_003497717.1| PREDICTED: high mobility group protein B1-like [Cricetulus griseus]
Length = 215
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+ K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYCPKIKGEHPGLS-IGDVAKKLGELWNNTAAEDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
KA KLK ++ K + AY K
Sbjct: 145 GKKAAKLKEKHEKGIAAYRAK 165
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKRKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|322517988|gb|ADX06860.1| high mobility group protein B1 [Sciaenops ocellatus]
Length = 206
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K E P +T + V K G W + +K P+
Sbjct: 85 KKKYKDPNAPKRPPSAFFIFCSEFRPKVKGEAPGLT-IGEVAKRLGEMWNGTASEDKQPF 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K++ AY +K
Sbjct: 144 EKKAAKLKEKYEKEVAAYRQK 164
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESK 108
K+ KP+ S++ F++ R+ KK++P+ + A K G+WK+MS EK +E
Sbjct: 3 KEQGKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSGRWKTMSSKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAYNKKQDG 129
A + K+ Y ++M +Y + G
Sbjct: 63 ARQDKARYEREMMSYVPARGG 83
>gi|194666188|ref|XP_875720.3| PREDICTED: high mobility group protein B2 [Bos taurus]
gi|297473608|ref|XP_002686711.1| PREDICTED: high mobility group protein B2 [Bos taurus]
gi|296488702|tpg|DAA30815.1| TPA: high-mobility group box 2-like [Bos taurus]
Length = 283
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 167 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 225
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 226 KEKYEKDIAAYRAK 239
>gi|332847763|ref|XP_003315517.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pan troglodytes]
gi|397485725|ref|XP_003813991.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pan paniscus]
Length = 207
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + GK KKDPN PKRPPS FF+F EF K NP + + V K W
Sbjct: 77 DYGPAKGGK-----KKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGI-PIGDVAKKLSEMW 130
Query: 95 KSMSPAEKAPYESKAEKLKSEY 116
K+++ +EK PY ++A KLK +Y
Sbjct: 131 KNLNDSEKQPYITQAAKLKEKY 152
>gi|344237192|gb|EGV93295.1| High mobility group protein B1 [Cricetulus griseus]
Length = 203
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+ K E+P ++ + V K G W + + +K PY
Sbjct: 74 KKKFKDPNAPKRPPSAFFLFCSEYCPKIKGEHPGLS-IGDVAKKLGELWNNTAAEDKQPY 132
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
KA KLK ++ K + AY K
Sbjct: 133 GKKAAKLKEKHEKGIAAYRAK 153
>gi|221221758|gb|ACM09540.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRP SAFF+F +FR K E P ++ + V K G KW +++ +K PY
Sbjct: 85 KKRFKDPNAPKRPSSAFFIFCADFRPQVKVETPGLS-IGDVAKKLGEKWNNLTAEDKVPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKAAKLKEKYEKDITAYRNK 164
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +W++MS EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|221220042|gb|ACM08682.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRP SAFF+F +FR K E P ++ + V K G KW +++ +K PY
Sbjct: 85 KKRFKDPNAPKRPSSAFFIFCADFRPQVKVETPGLS-IGDVAKKLGEKWNNLTAEDKVPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKAAKLKEKYEKDITAYRNK 164
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +WK+MS EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|444510285|gb|ELV09567.1| High mobility group protein B3 [Tupaia chinensis]
Length = 197
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 65 DYGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 119
Query: 95 KSMSPAEKAPYESKAEKLK 113
++S +EK PY +KA KLK
Sbjct: 120 NNLSDSEKQPYITKAAKLK 138
>gi|255715687|ref|XP_002554125.1| KLTH0E14850p [Lachancea thermotolerans]
gi|238935507|emb|CAR23688.1| KLTH0E14850p [Lachancea thermotolerans CBS 6340]
Length = 93
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDPN PKR SA+ F E R + ENP VT VG+ G KWK+++ EK
Sbjct: 9 KRTTRRKKDPNAPKRALSAYMFFANENRDIVRAENPGVT-FGQVGRLLGDKWKALTDEEK 67
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PYE+K K Y + YN
Sbjct: 68 QPYEAKHAADKKRYESEKELYN 89
>gi|148707462|gb|EDL39409.1| mCG8212 [Mus musculus]
Length = 145
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKRPPS FF+F EF K NP ++ + V K G WK++S +E A Y +K
Sbjct: 35 KKDPNAPKRPPSGFFLFCSEFHPKIKFTNPGIS-IGDVAKKLGEMWKNLSDSE-AAYVTK 92
Query: 109 AEKLK 113
A KLK
Sbjct: 93 AAKLK 97
>gi|291413747|ref|XP_002723128.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 117 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 175
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 176 KEKYEKDIAAYRAK 189
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK +E
Sbjct: 27 KGDPNKPRGKMSSYAFFVQMCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKPKFED 86
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 87 MAKSDKARYDREMKNY 102
>gi|194208319|ref|XP_001498869.2| PREDICTED: high mobility group protein B2-like [Equus caballus]
Length = 210
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNK + S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKARGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|85110964|ref|XP_963712.1| hypothetical protein NCU02819 [Neurospora crassa OR74A]
gi|28925429|gb|EAA34476.1| hypothetical protein NCU02819 [Neurospora crassa OR74A]
Length = 597
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
+KR+ +R KA D N P+RPPSA+ +F + R+ K N + T ++ K G W+++
Sbjct: 109 TKRKYRRHPKA--DENAPERPPSAYVLFSNKMREDLKGRNLSFTEIA---KLVGENWQNL 163
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+PAEK PYESKA+ K +Y ++ Y K
Sbjct: 164 TPAEKEPYESKAQAYKEKYHAELAEYKK 191
>gi|440912073|gb|ELR61675.1| Putative high mobility group protein B3-like protein, partial [Bos
grunniens mutus]
Length = 190
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D GS + GK KKDPN PKRPPS FF+F EF K NP ++ + V K G W
Sbjct: 76 DYGSAKGGK-----KKDPNAPKRPPSGFFLFFSEFCSKIKSTNPGIS-IGDVAKKLGEMW 129
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDG 129
++S ++K Y +K KLK +Y K + Y + DG
Sbjct: 130 NNLSDSKKQLYINKDAKLK-KYEKDVADYKGEFDG 163
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYES 107
AK DP KPK SA F++ RK KK + K +WK+MS EK+ ++
Sbjct: 2 AKGDPEKPKGKMSAHAFFVQMCRKKHKKTPKVPVNFAEFSKKCSERWKTMSGKEKSTFDE 61
Query: 108 KAEKLKSEYGKKMNAYNKKQDG 129
A+ K Y ++M Y + G
Sbjct: 62 MAKADKVHYNQEMKDYGSAKGG 83
>gi|417397133|gb|JAA45600.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 208
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
AK DPNKP+ S++ F++ R+ KK++P+ + S K +WK+MS EK+ +E
Sbjct: 2 AKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFSEFSKKCSERWKTMSAKEKSKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|221485710|gb|EEE23991.1| high mobility group protein, putative [Toxoplasma gondii GT1]
gi|221502922|gb|EEE28632.1| high mobility group protein, putative [Toxoplasma gondii VEG]
Length = 651
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPY 105
+AKKDPN PK+P S++ F ++ R K+ P++ + + VGK G +W +S ++K Y
Sbjct: 570 RAKKDPNAPKKPLSSYMFFAKDKRAEILKKQPSLKSDIGKVGKMIGEEWAKLSSSQKMTY 629
Query: 106 ESKAEKLKSEYGKKMNAYNKKQ 127
+ KAE+ K Y ++M+ YNKK+
Sbjct: 630 QKKAEQEKIRYQREMSLYNKKK 651
>gi|221221148|gb|ACM09235.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRP SAFF+F +FR K E P ++ + V K G KW +++ +K PY
Sbjct: 85 KKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLS-IGDVAKKLGEKWNNLTAEDKVPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKAAKLKEKYEKDITAYRNK 164
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +W++MS EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|426251515|ref|XP_004019467.1| PREDICTED: high mobility group protein B2-like [Ovis aries]
Length = 209
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|426230076|ref|XP_004009107.1| PREDICTED: high mobility group protein B2-like [Ovis aries]
Length = 209
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|8393536|ref|NP_058883.1| high mobility group protein B2 [Rattus norvegicus]
gi|293340790|ref|XP_001063065.2| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|293352163|ref|XP_573272.3| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|1708260|sp|P52925.2|HMGB2_RAT RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|1304193|dbj|BAA12350.1| HMG2 [Rattus norvegicus]
gi|51259308|gb|AAH78866.1| Hmgb2 protein [Rattus norvegicus]
gi|58476482|gb|AAH89854.1| Hmgb2 protein [Rattus norvegicus]
gi|77567606|gb|AAI07456.1| Hmgb2 protein [Rattus norvegicus]
gi|149032266|gb|EDL87172.1| rCG59188 [Rattus norvegicus]
Length = 210
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|291413997|ref|XP_002723251.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQMCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|237842875|ref|XP_002370735.1| high mobility group protein, putative [Toxoplasma gondii ME49]
gi|211968399|gb|EEB03595.1| high mobility group protein, putative [Toxoplasma gondii ME49]
Length = 644
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPY 105
+AKKDPN PK+P S++ F ++ R K+ P + + + VGK G +W +S ++K Y
Sbjct: 563 RAKKDPNAPKKPLSSYMFFAKDKRAEILKKQPTLKSDIGKVGKMIGEEWAKLSSSQKMTY 622
Query: 106 ESKAEKLKSEYGKKMNAYNKKQ 127
+ KAE+ K Y ++M+ YNKK+
Sbjct: 623 QKKAEQEKIRYQREMSLYNKKK 644
>gi|73993609|ref|XP_543194.2| PREDICTED: high mobility group protein B2 isoform 1 [Canis lupus
familiaris]
gi|301753755|ref|XP_002912713.1| PREDICTED: high mobility group protein B2-like [Ailuropoda
melanoleuca]
gi|410956554|ref|XP_003984907.1| PREDICTED: high mobility group protein B2 [Felis catus]
gi|281338293|gb|EFB13877.1| hypothetical protein PANDA_000462 [Ailuropoda melanoleuca]
Length = 210
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|11321591|ref|NP_002120.1| high mobility group protein B2 [Homo sapiens]
gi|83035095|ref|NP_001032705.1| high mobility group protein B2 [Bos taurus]
gi|194688133|ref|NP_001124160.1| high mobility group protein B2 [Homo sapiens]
gi|194688135|ref|NP_001124161.1| high mobility group protein B2 [Homo sapiens]
gi|332820789|ref|XP_517538.3| PREDICTED: high mobility group protein B2 isoform 2 [Pan
troglodytes]
gi|332820791|ref|XP_003310651.1| PREDICTED: high mobility group protein B2 isoform 1 [Pan
troglodytes]
gi|397505874|ref|XP_003823467.1| PREDICTED: high mobility group protein B2 isoform 1 [Pan paniscus]
gi|397505876|ref|XP_003823468.1| PREDICTED: high mobility group protein B2 isoform 2 [Pan paniscus]
gi|397505878|ref|XP_003823469.1| PREDICTED: high mobility group protein B2 isoform 3 [Pan paniscus]
gi|410038949|ref|XP_003950520.1| PREDICTED: high mobility group protein B2 [Pan troglodytes]
gi|123374|sp|P26583.2|HMGB2_HUMAN RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|109940084|sp|P40673.3|HMGB2_BOVIN RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|32333|emb|CAA44395.1| HMG-2 [Homo sapiens]
gi|184236|gb|AAA58659.1| high mobility group 2 protein [Homo sapiens]
gi|12654471|gb|AAH01063.1| High-mobility group box 2 [Homo sapiens]
gi|54696426|gb|AAV38585.1| high-mobility group box 2 [Homo sapiens]
gi|61358840|gb|AAX41628.1| high-mobility group box 2 [synthetic construct]
gi|71679685|gb|AAI00020.1| HMGB2 protein [Homo sapiens]
gi|81674324|gb|AAI09756.1| High-mobility group box 2 [Bos taurus]
gi|119625163|gb|EAX04758.1| high-mobility group box 2, isoform CRA_a [Homo sapiens]
gi|119625164|gb|EAX04759.1| high-mobility group box 2, isoform CRA_a [Homo sapiens]
gi|123982946|gb|ABM83214.1| high-mobility group box 2 [synthetic construct]
gi|123997623|gb|ABM86413.1| high-mobility group box 2 [synthetic construct]
gi|189053183|dbj|BAG34805.1| unnamed protein product [Homo sapiens]
gi|208966462|dbj|BAG73245.1| high-mobility group box 2 [synthetic construct]
gi|296484972|tpg|DAA27087.1| TPA: high mobility group protein B2 [Bos taurus]
gi|380785663|gb|AFE64707.1| high mobility group protein B2 [Macaca mulatta]
gi|383417929|gb|AFH32178.1| high mobility group protein B2 [Macaca mulatta]
gi|383417931|gb|AFH32179.1| high mobility group protein B2 [Macaca mulatta]
gi|383417933|gb|AFH32180.1| high mobility group protein B2 [Macaca mulatta]
gi|384941858|gb|AFI34534.1| high mobility group protein B2 [Macaca mulatta]
gi|384946750|gb|AFI36980.1| high mobility group protein B2 [Macaca mulatta]
gi|410212048|gb|JAA03243.1| high-mobility group box 2 [Pan troglodytes]
gi|410212050|gb|JAA03244.1| high-mobility group box 2 [Pan troglodytes]
gi|410253758|gb|JAA14846.1| high-mobility group box 2 [Pan troglodytes]
gi|410253760|gb|JAA14847.1| high-mobility group box 2 [Pan troglodytes]
gi|410304294|gb|JAA30747.1| high-mobility group box 2 [Pan troglodytes]
gi|410304296|gb|JAA30748.1| high-mobility group box 2 [Pan troglodytes]
gi|410337391|gb|JAA37642.1| high-mobility group box 2 [Pan troglodytes]
gi|410337393|gb|JAA37643.1| high-mobility group box 2 [Pan troglodytes]
gi|410337395|gb|JAA37644.1| high mobility group box 2 [Pan troglodytes]
gi|440908504|gb|ELR58513.1| High mobility group protein B2 [Bos grunniens mutus]
gi|738688|prf||2001363A high mobility group protein 2
Length = 209
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|383417927|gb|AFH32177.1| high mobility group protein B2 [Macaca mulatta]
Length = 206
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|351701092|gb|EHB04011.1| High mobility group protein B2 [Heterocephalus glaber]
Length = 215
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 94 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 152
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 153 KEKYEKDIAAYRAK 166
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|291385922|ref|XP_002709517.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
gi|344288245|ref|XP_003415861.1| PREDICTED: high mobility group protein B2-like [Loxodonta africana]
Length = 210
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|223646906|gb|ACN10211.1| High mobility group-T protein [Salmo salar]
gi|223672769|gb|ACN12566.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRP SAFF+F +FR K E P ++ + V K G KW +++ +K PY
Sbjct: 85 KKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLS-IGDVAKKLGEKWNNLTAEDKVPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKAAKLKEKYEKDITAYRNK 164
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +WK+MS EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|332217748|ref|XP_003258025.1| PREDICTED: high mobility group protein B2 [Nomascus leucogenys]
gi|426346003|ref|XP_004040680.1| PREDICTED: high mobility group protein B2 isoform 1 [Gorilla
gorilla gorilla]
gi|426346005|ref|XP_004040681.1| PREDICTED: high mobility group protein B2 isoform 2 [Gorilla
gorilla gorilla]
gi|426346007|ref|XP_004040682.1| PREDICTED: high mobility group protein B2 isoform 3 [Gorilla
gorilla gorilla]
gi|54696428|gb|AAV38586.1| high-mobility group box 2 [Homo sapiens]
Length = 208
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|149060359|gb|EDM11073.1| rCG63620 [Rattus norvegicus]
Length = 198
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 81 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 139
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 140 KEKYEKDIAAYRAK 153
>gi|291413749|ref|XP_002723129.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 219
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYCAK 165
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAV--GKAAGGKWKSMSPAEKAPYE 106
K DPNKP+ S++ F++ R+ K+++P+ ++V+ V K +WK+MS E + +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKRKHPD-SSVNFVEFSKKCSERWKTMSAKENSKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|226479042|emb|CAX73016.1| structure specific recognition protein 1 [Schistosoma japonicum]
Length = 679
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
SKRQ K+++K K DPN P RP SA+F++ E R+ K +V+ V KA G W++M
Sbjct: 579 SKRQTKKQEKPK-DPNAPTRPLSAYFLWFNENREKIAKSLSGQNSVAEVAKAGGELWRNM 637
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAY 123
K+ Y+S+ ++LK +Y + + Y
Sbjct: 638 DSETKSTYQSRVDELKKKYQEDLRVY 663
>gi|426397135|ref|XP_004064781.1| PREDICTED: high mobility group protein B3-like [Gorilla gorilla
gorilla]
Length = 221
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN KRP S FF+F EFR K NP ++ + + K G W + S EK PY +K
Sbjct: 106 KKDPNALKRPLSGFFLFCSEFRPKIKSTNPGIS-IGDMAKKLGEMWINYSDREKQPYITK 164
Query: 109 AEKLKSEYGKKMNAYNKKQDGDEA 132
A LK +Y K + Y K D A
Sbjct: 165 AADLKEKYEKDVADYKSKGKFDSA 188
>gi|432889764|ref|XP_004075350.1| PREDICTED: high mobility group-T protein-like [Oryzias latipes]
Length = 194
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
++KK KDPN PKRPPSAFF+F +FR K E+P ++ + K G W S S EK
Sbjct: 83 QKKKRFKDPNAPKRPPSAFFLFCADFRPKIKSESPGLS-IGDTAKKLGEMWNSSSAEEKQ 141
Query: 104 PYESKAEKLKSEYGKKMNAYNKK 126
PYE KA KLK +Y K + AY K
Sbjct: 142 PYEKKAAKLKEKYDKDIVAYRTK 164
Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P+ + S K +WK+MSP EK +E
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y ++M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|367006853|ref|XP_003688157.1| hypothetical protein TPHA_0M01480 [Tetrapisispora phaffii CBS 4417]
gi|357526464|emb|CCE65723.1| hypothetical protein TPHA_0M01480 [Tetrapisispora phaffii CBS 4417]
Length = 93
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
+G + KR + KKDPN PKR SA+ F E R + ENP+V+ +G+ G KW+
Sbjct: 2 AGPREIKKRTHRRKKDPNAPKRAMSAYMFFANETRDIVRAENPDVS-FGQIGRLLGEKWR 60
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYN 124
+++ +K P+E+KA+ K Y + YN
Sbjct: 61 ALTDEDKGPFEAKAQADKKRYESEKELYN 89
>gi|366996751|ref|XP_003678138.1| hypothetical protein NCAS_0I01260 [Naumovozyma castellii CBS 4309]
gi|342304009|emb|CCC71794.1| hypothetical protein NCAS_0I01260 [Naumovozyma castellii CBS 4309]
Length = 94
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDPN PKR S++ F R + ENP+VT VGK G +WK+++P EK
Sbjct: 10 KRTVRRKKDPNAPKRALSSYMFFANATRDIVRSENPDVT-FGQVGKLLGERWKALTPEEK 68
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
P+E KA++ K Y + Y+
Sbjct: 69 EPFELKAKQDKERYASEKALYD 90
>gi|29290594|emb|CAD83017.1| bM168F16.1 (novel protein similar to high-mobility group box 1
(Hmgb1)) [Mus musculus]
gi|148699130|gb|EDL31077.1| mCG49535 [Mus musculus]
Length = 208
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKR PSAFF+F E+ K E+P ++ + V K G W + + +K P
Sbjct: 86 KKKFKDPNAPKRSPSAFFLFCSEYCHKIKGEHPGLS-IGVVAKKLGEMWINTAVYDKQPC 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + A K D A
Sbjct: 145 EKKATKLKEKYEKDIAACRAKGKPDAA 171
>gi|444732758|gb|ELW73033.1| High mobility group protein B2 [Tupaia chinensis]
Length = 234
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 127 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 185
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 186 KEKYEKDIAAYRAK 199
>gi|302652822|ref|XP_003018251.1| hypothetical protein TRV_07738 [Trichophyton verrucosum HKI 0517]
gi|291181876|gb|EFE37606.1| hypothetical protein TRV_07738 [Trichophyton verrucosum HKI 0517]
Length = 132
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ +F E R ++ENPN+T VGK G +WK++S ++ PYE KA
Sbjct: 60 DPNAPKRGLSAYMIFANEQRAAVREENPNIT-FGQVGKVLGERWKALSDKQRVPYEEKAA 118
Query: 111 KLKSEYGKKMNAYN 124
K Y + AYN
Sbjct: 119 TDKQRYEDEKAAYN 132
>gi|213513415|ref|NP_001133101.1| high mobility group protein B1 [Salmo salar]
gi|197631937|gb|ACH70692.1| high-mobility group box 1 [Salmo salar]
Length = 203
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRP SAFF+F +FR K E P ++ + V K G KW +++ +K PY
Sbjct: 85 KKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLS-IGDVAKKLGEKWNNLTAEDKVPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKAAKLKEKYEKDITAYRNK 164
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +W++MS EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|67475910|ref|XP_653586.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56470556|gb|EAL48200.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449703217|gb|EMD43706.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica KU27]
Length = 111
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN+PKRPP+ +F++L E R + K+E+P+ V+ + K A +WK++ EK Y++KA+
Sbjct: 23 PNRPKRPPTPYFLYLNEHRASIKEEHPDAK-VTEIAKIASEQWKALGEEEKKEYQTKADA 81
Query: 112 LKSEYGKKMNAYNKKQ 127
K +Y K + Y+ K+
Sbjct: 82 AKEQYKKDIEKYDGKK 97
>gi|410081503|ref|XP_003958331.1| hypothetical protein KAFR_0G01620 [Kazachstania africana CBS 2517]
gi|372464919|emb|CCF59196.1| hypothetical protein KAFR_0G01620 [Kazachstania africana CBS 2517]
Length = 95
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR ++ KKDPN PKR SA+ F E R + ENP+VT +G+ G +WK+++ +K
Sbjct: 9 KRTQRRKKDPNAPKRALSAYMFFANENRDIVRSENPDVT-FGQIGRILGERWKALNAEDK 67
Query: 103 APYESKAEKLKSEY 116
PYE+KA K Y
Sbjct: 68 EPYEAKAAADKKRY 81
>gi|354484377|ref|XP_003504365.1| PREDICTED: high mobility group protein B2-like [Cricetulus griseus]
Length = 264
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 147 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 205
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 206 KEKYEKDIAAYRAK 219
>gi|340520749|gb|EGR50985.1| predicted protein [Trichoderma reesei QM6a]
Length = 83
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
+DPN PKR SA+ F E R+ ++ENP ++ VGK G +WK+++ ++APYE+KA
Sbjct: 2 QDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKLLGERWKALNDKQRAPYEAKA 60
Query: 110 EKLKSEYGKKMNAYNKKQDGD 130
K Y + AYN Q+ D
Sbjct: 61 AADKKRYEDEKQAYNADQEED 81
>gi|213515010|ref|NP_001133971.1| High mobility group protein B3 [Salmo salar]
gi|209156012|gb|ACI34238.1| High mobility group protein B3 [Salmo salar]
gi|223648118|gb|ACN10817.1| High mobility group protein B3 [Salmo salar]
Length = 206
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKRP S FF+F + R K ++P++ + V K G +W +++ A K PY K
Sbjct: 87 KKDPNAPKRPSSGFFIFCADHRPKIKAQHPSL-GIGDVAKKLGEQWNNLTDATKQPYLIK 145
Query: 109 AEKLKSEYGKKMNAY 123
A KLK +Y K + Y
Sbjct: 146 ANKLKDKYQKDVADY 160
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYE 106
AK P KPK S++ F++ R+ KK+ P + A K G+WK+MS EK ++
Sbjct: 2 AKGTPGKPKGKMSSYAYFVQTCREEHKKKTPEIPVNFAEFSKKCSGRWKTMSGKEKGKFD 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A++ K Y +M +
Sbjct: 62 DMAKQDKVRYDNEMMHF 78
>gi|361130747|gb|EHL02497.1| putative High mobility group protein 20A [Glarea lozoyensis 74030]
Length = 267
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
GSKR+ +R KA D N P+RPPSA+ +F + R+ K N + T ++ K G W++
Sbjct: 129 GSKRKYRRHPKA--DENCPERPPSAYVIFSNKMREELKGRNLSFTEIA---KLVGENWQN 183
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
++PAEK PYE +A K Y ++ Y K
Sbjct: 184 LAPAEKEPYEQQAFSAKERYNGELAEYKK 212
>gi|339234763|ref|XP_003378936.1| thymus high mobility group box protein TOX [Trichinella spiralis]
gi|316978470|gb|EFV61455.1| thymus high mobility group box protein TOX [Trichinella spiralis]
Length = 328
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 17 LKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKE 76
L N + + + T+K+ R KR + +KDPN+P++P SA+ +F + + T K +
Sbjct: 145 LLSNHKNLTYENSPTSKMTVVKSRTPKRRQNKRKDPNEPQKPVSAYALFFRDTQATIKGQ 204
Query: 77 NPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
NPN T V K W +++ K Y+ K E K +Y K+ AY
Sbjct: 205 NPNAT-FGEVSKIVAAMWDNLAADSKNAYKQKTEMAKKDYLKQCAAY 250
>gi|444732714|gb|ELW72989.1| Enkurin [Tupaia chinensis]
Length = 362
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + K G W + + EK PY
Sbjct: 86 KKKSKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDAAKKLGEMWNNTAADEKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYGAKGKPDAA 171
>gi|351705938|gb|EHB08857.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 176
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPS FF+F E+ K E+P ++ + V K W + + +K PY
Sbjct: 24 KKKFKDPNAPKRPPSTFFLFCSEYCPKIKGEHPGLS-IGDVAKKLEEMWNNAAADDKQPY 82
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK Y K + AY K D A
Sbjct: 83 EKKAAKLKENYEKDIAAYRAKGKPDAA 109
>gi|351706443|gb|EHB09362.1| High mobility group protein B3 [Heterocephalus glaber]
Length = 226
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN PKRPPS FF+F EFR K P +T + V K G W
Sbjct: 96 DCGPAKG----GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTKPGIT-IGDVAKKLGEMW 150
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
++S +EK PY +K KLK ++ K + Y K
Sbjct: 151 NNLSDSEKQPYITKVAKLKEKHEKDVADYKSK 182
>gi|302684321|ref|XP_003031841.1| hypothetical protein SCHCODRAFT_76744 [Schizophyllum commune H4-8]
gi|300105534|gb|EFI96938.1| hypothetical protein SCHCODRAFT_76744 [Schizophyllum commune H4-8]
Length = 114
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 9/102 (8%)
Query: 26 KRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA 85
+RKAAT + K +KAKKDPN PKR SA+ F +++R+ K ENP+ +
Sbjct: 10 RRKAAT--------KSEKTPRKAKKDPNAPKRALSAYMFFSQDWRERVKAENPDAS-FGE 60
Query: 86 VGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
+GK G KWK M EK PY +KA K K AY++K+
Sbjct: 61 LGKILGAKWKEMDEDEKKPYVAKAAKDKERAEADKAAYDEKK 102
>gi|291415825|ref|XP_002724150.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEHSVKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYE 106
K PNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 2 VKGHPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|401412468|ref|XP_003885681.1| High mobility group protein 1, related [Neospora caninum Liverpool]
gi|325120101|emb|CBZ55655.1| High mobility group protein 1, related [Neospora caninum Liverpool]
Length = 98
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEK 102
++K+ KKDPN PK+P S++ F ++ R K+ P++ + + VGK G +W +S ++K
Sbjct: 14 KKKRVKKDPNAPKKPLSSYMFFAKDKRAEILKKQPSLKSDIGKVGKMIGEEWAKLSSSQK 73
Query: 103 APYESKAEKLKSEYGKKMNAYNKKQ 127
Y+ KAE+ K Y ++M+ YNKK+
Sbjct: 74 LTYQKKAEQEKIRYQREMSLYNKKK 98
>gi|395526464|ref|XP_003765383.1| PREDICTED: high mobility group protein B4 [Sarcophilus harrisii]
Length = 207
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP PKRPPS+FF+F E K +NP+ + V V K G W S +K PYE KA
Sbjct: 92 DPKAPKRPPSSFFLFSREHYTKIKSDNPHWSVVQ-VAKLLGEMWSKKSEQDKQPYEEKAA 150
Query: 111 KLKSEYGKKMNAY 123
+L+++Y +++ Y
Sbjct: 151 RLRAKYHQELMTY 163
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL R K++ PN K KWK++S EK+ YE+ A
Sbjct: 7 KPKVNLSSYVHFLLNCRNKHKEQQPNAYINFKEFSKRCSEKWKTISKHEKSKYEAIARLD 66
Query: 113 KSEYGKKMNAY 123
K+ Y K+M Y
Sbjct: 67 KARYQKEMKNY 77
>gi|348525338|ref|XP_003450179.1| PREDICTED: high mobility group-T protein-like isoform 1
[Oreochromis niloticus]
Length = 200
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
++KK KDPN PKRPPSAFF+F +FR K E P ++ + K G W S S EK
Sbjct: 83 QKKKRFKDPNAPKRPPSAFFLFCADFRPKIKSEYPGLS-IGDTAKKLGEMWNSSSAEEKQ 141
Query: 104 PYESKAEKLKSEYGKKMNAYNKK 126
PYE KA KLK +Y K + AY K
Sbjct: 142 PYEKKAAKLKEKYDKDIVAYRTK 164
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P+ + S K +WK+MSP EK +E
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y ++M Y
Sbjct: 63 AKQDKLRYEREMKNY 77
>gi|392883890|gb|AFM90777.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N P+RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +L
Sbjct: 92 NAPRRPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQL 150
Query: 113 KSEYGKKMNAY 123
K +Y K++ AY
Sbjct: 151 KEKYEKEVAAY 161
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAYN 124
A+ K Y ++M YN
Sbjct: 63 LAKNDKVRYDREMRNYN 79
>gi|351698285|gb|EHB01204.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 215
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDITAYRAKGKPDAA 171
>gi|47522942|ref|NP_999228.1| high mobility group protein B2 [Sus scrofa]
gi|123375|sp|P17741.2|HMGB2_PIG RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|164492|gb|AAA31051.1| non-histone protein HMG2 precursor [Sus scrofa]
Length = 210
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAY 123
K +Y K + AY
Sbjct: 152 KEKYEKDIAAY 162
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|395850201|ref|XP_003797684.1| PREDICTED: high mobility group protein B1 [Otolemur garnettii]
Length = 289
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|355563197|gb|EHH19759.1| hypothetical protein EGK_02478, partial [Macaca mulatta]
Length = 121
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 31 TAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAA 90
T + D G + GK DPN PKRP S FF+F EF K NP ++ + V K
Sbjct: 11 TERKDYGPAKGGKNN-----DPNAPKRPLSGFFLFCSEFHPKMKSTNPGIS-IGDVAKKL 64
Query: 91 GGKWKSMSPAEKAPYESKAEKL 112
G WK+++ +EK PY +K KL
Sbjct: 65 GEMWKNLNDSEKQPYVTKVAKL 86
>gi|15236607|ref|NP_194111.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|75266376|sp|Q9SUP7.1|HMGB6_ARATH RecName: Full=High mobility group B protein 6; AltName:
Full=Nucleosome/chromatin assembly factor group D 06;
Short=Nucleosome/chromatin assembly factor group D 6;
AltName: Full=WRKY transcription factor 53;
Short=AtWRKY53; Short=WRKY DNA-binding protein 53
gi|4454049|emb|CAA23046.1| 98b like protein [Arabidopsis thaliana]
gi|7269229|emb|CAB81298.1| 98b like protein [Arabidopsis thaliana]
gi|18377799|gb|AAL67049.1| putative 98b protein [Arabidopsis thaliana]
gi|20465867|gb|AAM20038.1| putative 98b protein [Arabidopsis thaliana]
gi|22022506|gb|AAM83212.1| putative 98b protein [Arabidopsis thaliana]
gi|332659407|gb|AEE84807.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
Length = 456
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPK+P S++F+F ++ RK +E P T + V KWK +S EK Y KA
Sbjct: 375 DPNKPKKPASSYFLFSKDERKKLTEERPG-TNNATVTALISLKWKELSEEEKQVYNGKAA 433
Query: 111 KLKSEYGKKMNAYNKKQDGDEAS 133
KL Y K++ AYNKK +S
Sbjct: 434 KLMEAYKKEVEAYNKKSAATTSS 456
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPK P SAF V+ E R ++EN +V V K G +WK++S +KAPYE A+
Sbjct: 251 DPLKPKHPVSAFLVYANERRAALREENKSVVEV---AKITGEEWKNLSDKKKAPYEKVAK 307
Query: 111 KLKSEYGKKMNAYNKKQDGDEAS 133
K K Y + M Y + ++ + S
Sbjct: 308 KNKETYLQAMEEYKRTKEEEALS 330
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 14 QEALKPNDRKVGKRK----AATAKLDSGSKRQGKREK---KAKKDPNKPKRPPSAFFVFL 66
QE LK +K+ K K T S Q ++EK K KKD + KRP S++ ++
Sbjct: 90 QEKLKVELKKLQKMKEFKPNMTFACGQSSLTQAEQEKANKKKKKDCPETKRPSSSYVLWC 149
Query: 67 EEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
++ KKENP G KWKS+S +K PYE + + K Y
Sbjct: 150 KDQWTEVKKENPEAD-FKETSNILGAKWKSLSAEDKKPYEERYQVEKEAY 198
>gi|302755040|ref|XP_002960944.1| hypothetical protein SELMODRAFT_73858 [Selaginella moellendorffii]
gi|300171883|gb|EFJ38483.1| hypothetical protein SELMODRAFT_73858 [Selaginella moellendorffii]
Length = 457
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDP KPKRP + + + EE R EN V +GK G +W+SM +APYE A
Sbjct: 245 KDPEKPKRPTTGYMAYSEERRPALMNEN---LKVPQIGKILGEEWRSMDEKARAPYEKIA 301
Query: 110 EKLKSEYGKKMNAYNKKQDGDEA 132
K+ Y +M AYNKK+ +E
Sbjct: 302 TDAKATYLTEMEAYNKKKAQEEV 324
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP + K+P S++F++ + R+ + +NPN + + G WKS+S EK PYE +
Sbjct: 126 DPERIKKPLSSYFLWCNDQREKVRAQNPN-AGIKELSSIFGELWKSVSEEEKKPYEEIYQ 184
Query: 111 KLKSEYGKKM 120
K K EY K++
Sbjct: 185 KNKEEYLKQL 194
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 44 REKKAKK-DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
R+ KAK +P KPK+ +A+ +F E+RK + E P A KW M EK
Sbjct: 362 RKAKAKTAEPGKPKKAATAYILFGMEYRKKLQAEMPTAKFAELTALVA-SKWNEMGAEEK 420
Query: 103 APYESKA--EKLKSE 115
PY ++A EKLK +
Sbjct: 421 QPYVNQAGVEKLKYQ 435
>gi|109076196|ref|XP_001085665.1| PREDICTED: high mobility group protein B2-like [Macaca mulatta]
Length = 321
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 207 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 265
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 266 KEKYEKDIAAYRAK 279
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPA 100
G + +++ DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS
Sbjct: 110 GSFQCRSRGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAK 169
Query: 101 EKAPYESKAEKLKSEYGKKMNAY 123
EK+ +E A+ K+ Y ++M Y
Sbjct: 170 EKSKFEDMAKSDKARYDREMKNY 192
>gi|291395415|ref|XP_002714100.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R + E+ ++ + K G W S ++ PYE KA
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIRSEHSGLS-IGDTAKKLGEMWSEQSAKDEQPYEQKAA 149
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + AY K
Sbjct: 150 KLKEKYEKDIAAYRAK 165
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPN+P+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNEPRGKMSSYAFFVQTCREEHKKKHPDSSINFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKACYDREMKNY 78
>gi|149628522|ref|XP_001521757.1| PREDICTED: high mobility group protein B2-like, partial
[Ornithorhynchus anatinus]
Length = 106
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA
Sbjct: 40 DPNAPKRPPSAFFLFCSEQRPKIKSEHPGLS-IGDTAKKLGELWSEQSAKDKLPYEQKAA 98
Query: 111 KLKSEYGK 118
KLK +Y K
Sbjct: 99 KLKEKYEK 106
>gi|334186863|ref|NP_001190816.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|332659408|gb|AEE84808.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
Length = 450
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPK+P S++F+F ++ RK +E P T + V KWK +S EK Y KA
Sbjct: 369 DPNKPKKPASSYFLFSKDERKKLTEERPG-TNNATVTALISLKWKELSEEEKQVYNGKAA 427
Query: 111 KLKSEYGKKMNAYNKKQDGDEAS 133
KL Y K++ AYNKK +S
Sbjct: 428 KLMEAYKKEVEAYNKKSAATTSS 450
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPK P SAF V+ E R ++EN +V V K G +WK++S +KAPYE A+
Sbjct: 251 DPLKPKHPVSAFLVYANERRAALREENKSVVEV---AKITGEEWKNLSDKKKAPYEKVAK 307
Query: 111 KLKSEYGKKMNAYNKKQDGDEAS 133
K K Y + M Y + ++ + S
Sbjct: 308 KNKETYLQAMEEYKRTKEEEALS 330
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 14 QEALKPNDRKVGKRK----AATAKLDSGSKRQGKREK---KAKKDPNKPKRPPSAFFVFL 66
QE LK +K+ K K T S Q ++EK K KKD + KRP S++ ++
Sbjct: 90 QEKLKVELKKLQKMKEFKPNMTFACGQSSLTQAEQEKANKKKKKDCPETKRPSSSYVLWC 149
Query: 67 EEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
++ KKENP G KWKS+S +K PYE + + K Y
Sbjct: 150 KDQWTEVKKENPEAD-FKETSNILGAKWKSLSAEDKKPYEERYQVEKEAY 198
>gi|148673911|gb|EDL05858.1| mCG144566 [Mus musculus]
Length = 240
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 111 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 169
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 170 EKKAAKLKEKYEKDIAAYRAKGKPDAA 196
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 28 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 87
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 88 MAKADKARYEREMKTY 103
>gi|225706046|gb|ACO08869.1| High mobility group-T protein [Osmerus mordax]
Length = 204
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F +FR K E P +T + V K G W +K PY
Sbjct: 85 KKRFKDPNAPKRPPSAFFIFCADFRAKVKGETPGLT-IGDVAKKLGEMWNGTCAEDKQPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKAAKLKEKYEKDIAAYRAK 164
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +WK+MS EK +E
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 AKLDKVRYEREMKNY 77
>gi|402882719|ref|XP_003904882.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Papio anubis]
Length = 132
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 31 TAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAA 90
T + D G + GK K DPN PKRP S FF+F EF K NP ++ + V K
Sbjct: 11 TERKDYGPAKGGK-----KNDPNAPKRPLSGFFLFCSEFHPKMKSTNPGIS-IGDVAKKL 64
Query: 91 GGKWKSMSPAEKAPYESKAEKL 112
G WK+++ +EK PY +K KL
Sbjct: 65 GEMWKNLNDSEKQPYVTKVAKL 86
>gi|403295522|ref|XP_003938690.1| PREDICTED: high mobility group protein B3-like [Saimiri boliviensis
boliviensis]
Length = 202
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + K KKDPN KRPPS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKG----GKKKKDPNASKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
+++ +EK PY +KA KLK +Y K + Y K D A
Sbjct: 132 NNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGA 169
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYE 106
AK DP KPK SA+ F++ R+ KK+NP V A K +WK+MS EK+ ++
Sbjct: 2 AKCDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFD 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 EMAKADKVRYDREMKDY 78
>gi|348541671|ref|XP_003458310.1| PREDICTED: high mobility group-T protein-like [Oreochromis
niloticus]
Length = 206
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F EFR K E+P ++ + V K G W S + +K PYE KA
Sbjct: 91 DPNAPKRPPSAFFIFCSEFRPKVKGESPGLS-IGDVAKRLGEMWNSTAAEDKQPYEKKAA 149
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + AY K
Sbjct: 150 KLKEKYEKDIAAYRAK 165
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + A K +WK+MS EK +E
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAYNKKQDG 129
A + K+ Y ++M Y + G
Sbjct: 63 ARQDKARYEREMMNYVPARGG 83
>gi|224043266|ref|XP_002194652.1| PREDICTED: high mobility group protein B1 [Taeniopygia guttata]
Length = 215
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y K+M Y
Sbjct: 62 DMAKADKLRYEKEMKNY 78
>gi|110287688|sp|Q4PBZ9.2|NHP6_USTMA RecName: Full=Non-histone chromosomal protein 6
Length = 99
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR KAKKDP+ PKRP SA+ F ++ R+ K NP VG+ G KWK MS AEK
Sbjct: 16 KRTTKAKKDPDAPKRPLSAYMFFSQDQRERVKNANPEA-GFGEVGRLLGAKWKEMSEAEK 74
Query: 103 APYESKAEKLKSEYGKKMNAYNKKQ 127
PY A + K+ + AYNK++
Sbjct: 75 KPYNDMANRDKARAEAEKAAYNKRR 99
>gi|5815432|gb|AAD52670.1|AF178849_1 high mobility group protein HMG1 [Gallus gallus]
Length = 214
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y K+M Y
Sbjct: 62 DMAKADKLRYEKEMKNY 78
>gi|380083124|gb|AFD33645.1| high mobility group box 1, partial [Gallus gallus]
Length = 185
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y K+M Y
Sbjct: 62 DMAKADKLRYEKEMKNY 78
>gi|45382473|ref|NP_990233.1| high mobility group protein B1 [Gallus gallus]
gi|326914268|ref|XP_003203448.1| PREDICTED: high mobility group protein B1-like [Meleagris
gallopavo]
gi|4140289|emb|CAA76978.1| high mobility group 1 protein [Gallus gallus]
gi|60098903|emb|CAH65282.1| hypothetical protein RCJMB04_15a21 [Gallus gallus]
Length = 215
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y K+M Y
Sbjct: 62 DMAKADKLRYEKEMKNY 78
>gi|426244704|ref|XP_004016160.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 203
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGQMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|320580355|gb|EFW94578.1| high-mobility group non-histone chromosomal protein, putative
[Ogataea parapolymorpha DL-1]
Length = 91
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R + ENP + A +GK G KWK++ A KAPYE+KAE
Sbjct: 15 DPNAPKRSLSAYMFFANEQRDIVRAENPGI-AFGQIGKLLGEKWKALDEAGKAPYEAKAE 73
Query: 111 KLKSEYGKKMNAYNKKQ 127
K Y + + Y K Q
Sbjct: 74 ADKKRYELEKSEYTKSQ 90
>gi|356506416|ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
Length = 614
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 35 DSGSKRQ--GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGG 92
DSG +++ K+E +KDPN PKR S F F + R+ KK NP + + + VG+ G
Sbjct: 508 DSGDEKEKPAKKESNKEKDPNAPKRAMSGFMFFSKLERENLKKTNPGI-SFTDVGRVLGE 566
Query: 93 KWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
KWK +S EK PYE+KA + K Y +++ Y Q
Sbjct: 567 KWKKLSAEEKEPYEAKAREDKKRYMDEISGYKNPQ 601
>gi|71012570|ref|XP_758511.1| hypothetical protein UM02364.1 [Ustilago maydis 521]
gi|46098169|gb|EAK83402.1| hypothetical protein UM02364.1 [Ustilago maydis 521]
Length = 125
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 22 RKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVT 81
R + K A K S + Q KR KAKKDP+ PKRP SA+ F ++ R+ K NP
Sbjct: 22 RAIVKMAKADTKTKSSTSTQ-KRTTKAKKDPDAPKRPLSAYMFFSQDQRERVKNANPEA- 79
Query: 82 AVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
VG+ G KWK MS AEK PY A + K+ + AYNK++
Sbjct: 80 GFGEVGRLLGAKWKEMSEAEKKPYNDMANRDKARAEAEKAAYNKRR 125
>gi|426232480|ref|XP_004010250.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 201
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ V V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-VGDVAKKLGQMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K +P KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGEPKKPRGKMSSYAFFVQTCREERKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|355691926|gb|EHH27111.1| hypothetical protein EGK_17228 [Macaca mulatta]
Length = 196
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
D N PKRPPS FF+F EF K NP ++ + + K G WK+++ +EK PY +KA
Sbjct: 76 DSNAPKRPPSGFFLFSSEFCPKMKSTNPGIS-IGDMVKKLGEMWKNLNDSEKQPYITKAA 134
Query: 111 KLKSEY 116
KLK +Y
Sbjct: 135 KLKEKY 140
>gi|344305949|ref|XP_003421652.1| PREDICTED: TOX high mobility group box family member 4-like
[Loxodonta africana]
Length = 619
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 39 KRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
K+Q +K+ KKDPN+P++P SA+ +F + + K +NPN T V K W S+
Sbjct: 207 KKQKAPKKRRKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLG 265
Query: 99 PAEKAPYESKAEKLKSEYGKKMNAYNKKQD 128
+K Y+ K E K EY K + AY Q+
Sbjct: 266 EEQKQVYKRKTEAAKKEYLKALAAYKDNQE 295
>gi|3342573|gb|AAC27651.1| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S + +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSERCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|444731734|gb|ELW72082.1| High mobility group protein B1 [Tupaia chinensis]
Length = 221
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P + + V K G W + + EK PY
Sbjct: 80 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-PIGDVAKKLGEMWINTAADEKQPY 138
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 139 EKKAAKLKEKYEKDIAAYQAKGKPDAA 165
>gi|426236473|ref|XP_004012193.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 201
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGQMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|148696675|gb|EDL28622.1| mCG11166 [Mus musculus]
Length = 160
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 43 NAPKRPPSAFFLFCSENRPKIKIEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 101
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 102 KEKYEKDIAAYRAK 115
>gi|414585863|tpg|DAA36434.1| TPA: hypothetical protein ZEAMMB73_396569 [Zea mays]
Length = 119
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 56 KRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY------ESKA 109
KR + FF FL EFR + +++P + V V KAAG KW+SMS EKA Y + KA
Sbjct: 20 KRGLTPFFAFLAEFRPQYLEKHPELKGVKEVSKAAGEKWRSMSDEEKAKYGGSKKQDGKA 79
Query: 110 EKLKSEYGKKMNAYNKKQDGDEASDKSKSEVNDEDE 145
K ++ KK A ++ D E S+KSKSEV D+++
Sbjct: 80 SKKENTSSKKAKADVREGDEAEGSNKSKSEVEDDEQ 115
>gi|302828472|ref|XP_002945803.1| hypothetical protein VOLCADRAFT_72419 [Volvox carteri f.
nagariensis]
gi|300268618|gb|EFJ52798.1| hypothetical protein VOLCADRAFT_72419 [Volvox carteri f.
nagariensis]
Length = 199
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN PK+ +AF F R K +NP V+ VGK G KWKS+ EK+ YE KA
Sbjct: 76 KDPNAPKKNLTAFMYFSNAQRDKVKTDNPGVS-FGEVGKLLGEKWKSLGANEKSEYEEKA 134
Query: 110 EKLKSEYGKKMNAY 123
+K K Y K+M AY
Sbjct: 135 KKDKERYAKEMEAY 148
>gi|397524101|ref|XP_003832048.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pan paniscus]
Length = 130
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K K DPN PKRP S FF+F EF K NP ++ + V K G W +++ +EK PY
Sbjct: 20 KGGKNDPNAPKRPLSGFFLFCSEFCPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPY 78
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEASDKSK 137
+K KLK +Y K + Y K D D +K
Sbjct: 79 VTKVAKLK-KYEKDVADYKSKGKLDGTKDPAK 109
>gi|296470699|tpg|DAA12814.1| TPA: high mobility group box 3-like [Bos taurus]
Length = 197
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D GS + GK KDPN PKRPPS FF+F EF K NP ++ + V K G W
Sbjct: 76 DYGSAKGGK------KDPNAPKRPPSGFFLFFSEFCSEIKSTNPGIS-IGDVAKKLGEMW 128
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDG 129
++S ++K Y +K KLK +Y K + Y + DG
Sbjct: 129 NNLSDSKKQLYVNKDAKLK-KYEKDVADYKGEFDG 162
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYES 107
AK DP KPK SA F++ RK KK + K +WK+MS EK+ ++
Sbjct: 2 AKGDPEKPKGKMSAHAFFVQMCRKKHKKTPKVPVNFAEFSKKCSERWKTMSGKEKSTFDE 61
Query: 108 KAEKLKSEYGKKMNAYNKKQDG 129
A+ K Y ++M Y + G
Sbjct: 62 MAKADKVHYNQEMKDYGSAKGG 83
>gi|74153177|dbj|BAB27638.3| unnamed protein product [Mus musculus]
Length = 191
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSENRPKIKIEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|426236471|ref|XP_004012192.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 213
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGNVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|51592117|ref|NP_001004034.1| high mobility group protein B1 [Sus scrofa]
gi|123371|sp|P12682.3|HMGB1_PIG RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|164490|gb|AAA31050.1| non-histone protein HMG1 [Sus scrofa]
Length = 215
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKHPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|156083745|ref|XP_001609356.1| high mobility group protein-like protein NHP1 [Babesia bovis T2Bo]
gi|730136|sp|P40632.1|NHP1_BABBO RecName: Full=High mobility group protein homolog NHP1
gi|344189439|pdb|2LHJ|A Chain A, Nmr Structure Of The High Mobility Group Protein-Like
Protein Nhp1 From Babesia Bovis T2bo (Baboa.00841.A)
gi|155890|gb|AAA27799.1| non-histone protein [Babesia bovis]
gi|154796607|gb|EDO05788.1| high mobility group protein-like protein NHP1 [Babesia bovis]
Length = 97
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 34 LDSGSKRQG-KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAG 91
+ S R G +R +KAKKDPN PKR S++ F +E R ENP + V+A+GK G
Sbjct: 1 MAGASDRTGVRRPRKAKKDPNAPKRALSSYMFFAKEKRVEIIAENPEIAKDVAAIGKMIG 60
Query: 92 GKWKSMSPAEKAPYE-------SKAEKLKSEYGKK 119
W ++S EK PYE + E+ K+EY ++
Sbjct: 61 AAWNALSDEEKKPYERMSDEDRVRYEREKAEYAQR 95
>gi|403300479|ref|XP_003940964.1| PREDICTED: high mobility group protein B1-like [Saimiri boliviensis
boliviensis]
Length = 215
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKLKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGKMWNNTAANDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S+ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSCAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKVDKACYEREMKTY 78
>gi|335892930|gb|AEH59760.1| high mobility group box 2 [Lethenteron camtschaticum]
Length = 194
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+ KDPN PKRPPSAFFVF E R K ++P + + + K G W ++P K+PY
Sbjct: 84 KRKTKDPNAPKRPPSAFFVFCSEHRPKVKADHPGL-GIGEIAKRLGEMWGLLTPETKSPY 142
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 143 EKKAAKLKEKYEKDVAAYRGK 163
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K +P KP+ S++ F++ R+ KK++P + A K +WK+MSP EKA +E
Sbjct: 3 KGEPGKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSPKEKARFEE 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYDREMKNY 78
>gi|5764680|gb|AAC27653.2| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAEEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|410961840|ref|XP_003987486.1| PREDICTED: LOW QUALITY PROTEIN: TOX high mobility group box family
member 4 [Felis catus]
Length = 623
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 39 KRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
K+Q +K+ KKDPN+P++P SA+ +F + + K +NPN T V K W S+
Sbjct: 211 KKQKAPKKRXKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLG 269
Query: 99 PAEKAPYESKAEKLKSEYGKKMNAYNKKQD 128
+K Y+ K E K EY K + AY Q+
Sbjct: 270 EEQKQVYKRKTEAAKKEYLKALAAYKDNQE 299
>gi|410057418|ref|XP_003954213.1| PREDICTED: high mobility group protein B1-like [Pan troglodytes]
Length = 210
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ V V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-VGDVAKKLGEMWNNAAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|392575401|gb|EIW68534.1| hypothetical protein TREMEDRAFT_32029 [Tremella mesenterica DSM
1558]
Length = 116
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 6/101 (5%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR K KKDPN PKR SA+ F++++R K ++P+V+ GK G KWK+MS AEK
Sbjct: 19 KRAPKEKKDPNAPKRGLSAYMFFVQDYRPKIKNDHPDVS-FGETGKLLGEKWKAMSAAEK 77
Query: 103 APYESKA--EKLKSEYGKKMNAYNKKQDGD-EASDKSKSEV 140
P+E A +KL++E KK AY G+ + S KSK V
Sbjct: 78 KPFEDLAAKDKLRAEKDKK--AYLATGGGEKKTSKKSKPAV 116
>gi|344300446|gb|EGW30767.1| Non-histone chromosomal protein 6 [Spathaspora passalidarum NRRL
Y-27907]
Length = 93
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDP+ PKR SA+ F E R + ENP ++ VGK G KWK+++ EK PYE+K
Sbjct: 14 KKDPDAPKRSLSAYMFFANENRDIVRAENPGIS-FGQVGKLLGEKWKALTADEKVPYENK 72
Query: 109 AEKLKSEYGKKMNAYNKK 126
AE K Y K+ Y K+
Sbjct: 73 AETDKKRYEKEKAEYAKR 90
>gi|109098276|ref|XP_001102554.1| PREDICTED: high mobility group protein B1-like [Macaca mulatta]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
++ K+ Y ++M Y
Sbjct: 63 MSKADKARYEREMKTY 78
>gi|301757910|ref|XP_002914802.1| PREDICTED: high mobility group protein B1-like [Ailuropoda
melanoleuca]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP K + S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|148709727|gb|EDL41673.1| mCG9102 [Mus musculus]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|74181373|dbj|BAE29962.1| unnamed protein product [Mus musculus]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ K+++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKRKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|26350077|dbj|BAC38678.1| unnamed protein product [Mus musculus]
Length = 181
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|148682766|gb|EDL14713.1| mCG116825 [Mus musculus]
Length = 162
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 37 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 95
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 96 EKKAAKLKEKYEKDIAAYRAKGKPDAA 122
>gi|444707034|gb|ELW48343.1| High mobility group protein B1 [Tupaia chinensis]
Length = 203
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 74 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 132
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 133 EKKAAKLKEKYEKDIAAYRAKGKPDAA 159
>gi|30584163|gb|AAP36330.1| Homo sapiens high-mobility group box 1 [synthetic construct]
gi|54697182|gb|AAV38963.1| high-mobility group box 1 [synthetic construct]
gi|54697184|gb|AAV38964.1| high-mobility group box 1 [synthetic construct]
gi|61367269|gb|AAX42974.1| high-mobility group box 1 [synthetic construct]
gi|61367275|gb|AAX42975.1| high-mobility group box 1 [synthetic construct]
gi|61371572|gb|AAX43692.1| high-mobility group box 1 [synthetic construct]
Length = 216
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|343425092|emb|CBQ68629.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 290
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 10/109 (9%)
Query: 16 ALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKK 75
AL P D + ++ A A K++G + +DP KPKRP SAFF FL + R + +
Sbjct: 185 ALSPED--IKRQNAYIA----SQKKKGIKGTAFLRDPAKPKRPNSAFFEFLNDLRAS-EA 237
Query: 76 ENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYN 124
PN+T S G G +WK MS +KAPYE +A + +Y + + YN
Sbjct: 238 VIPNITEFSKRG---GERWKQMSAEQKAPYEQRALQALEQYKRDLEIYN 283
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 18/96 (18%)
Query: 60 SAFFVFLEE----------FRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
S+F +++ E ++KT K V + + KA G +W ++P KA YE++
Sbjct: 109 SSFLIYMSERVAQLKGEPLYQKTSPKTGAQVVDIVKMAKAVGAEWAQLAPNLKARYEAQH 168
Query: 110 EKLKSEYGKKMNAYN--------KKQDGDEASDKSK 137
E+ K EY + + + K+Q+ AS K K
Sbjct: 169 EQEKEEYERALAEWKAALSPEDIKRQNAYIASQKKK 204
>gi|149030113|gb|EDL85190.1| rCG63106 [Rattus norvegicus]
Length = 201
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 74 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 132
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 133 EKKAAKLKEKYEKDIAAYRAKGKPDAA 159
>gi|417397281|gb|JAA45674.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 216
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 87 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 145
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 146 EKKAAKLKEKYEKDIAAYRAKGKPDAA 172
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKM 120
A+ K+ Y ++M
Sbjct: 63 MAKADKARYEREM 75
>gi|71019847|ref|XP_760154.1| hypothetical protein UM04007.1 [Ustilago maydis 521]
gi|46099871|gb|EAK85104.1| hypothetical protein UM04007.1 [Ustilago maydis 521]
Length = 286
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 10/109 (9%)
Query: 16 ALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKK 75
AL P D + ++ A A K++G + +DP KPKRP SAFF FL + R + +
Sbjct: 181 ALSPED--IKRQNAYIA----SQKKKGIKGTAFLRDPAKPKRPNSAFFEFLNDLRAS-EA 233
Query: 76 ENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYN 124
PN+T S G G +WK MS +KAPYE +A + +Y + + YN
Sbjct: 234 VIPNITEFSKRG---GERWKQMSAEQKAPYEQRALQALEQYKRDLELYN 279
>gi|297297620|ref|XP_001106417.2| PREDICTED: high mobility group protein B2-like [Macaca mulatta]
Length = 210
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-TGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYQKDIAAYRAK 165
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKTMSAKEKSKFEG 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 MAKSDKVCYDREMKNY 78
>gi|149691739|ref|XP_001488130.1| PREDICTED: high mobility group protein B1-like [Equus caballus]
Length = 212
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K +P KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGEPKKPRGRMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|5764678|gb|AAC27650.2| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+ S EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTKSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|189236107|ref|XP_973934.2| PREDICTED: similar to High mobility group protein DSP1 (Protein
dorsal switch 1) [Tribolium castaneum]
Length = 505
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
G K++GK+ K+ K DPN PKR SAFF F + R K +NP V + K G +W
Sbjct: 381 GEKQRGKKRKQVK-DPNAPKRSLSAFFWFSNDERAKVKSQNPEF-GVGDIAKELGRRWAD 438
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
P K+ YE+ A+K K+ Y K+M AY KK
Sbjct: 439 AEPEMKSKYEALADKDKARYEKEMTAYKKK 468
>gi|332863449|ref|XP_001169802.2| PREDICTED: high mobility group protein B1-like, partial [Pan
troglodytes]
Length = 174
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|193787044|dbj|BAG51867.1| unnamed protein product [Homo sapiens]
Length = 176
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 47 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 105
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 106 EKKAAKLKEKYEKDIAAYRAKGKPDAA 132
>gi|431920962|gb|ELK18731.1| High mobility group protein B1 [Pteropus alecto]
Length = 215
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|55639639|ref|XP_509611.1| PREDICTED: high mobility group protein B1 isoform 15 [Pan
troglodytes]
gi|114649261|ref|XP_001140156.1| PREDICTED: high mobility group protein B1 isoform 3 [Pan
troglodytes]
gi|114649265|ref|XP_001140328.1| PREDICTED: high mobility group protein B1 isoform 5 [Pan
troglodytes]
gi|114649269|ref|XP_001140491.1| PREDICTED: high mobility group protein B1 isoform 7 [Pan
troglodytes]
gi|332841128|ref|XP_003314147.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|332841133|ref|XP_003314149.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|397513185|ref|XP_003826902.1| PREDICTED: high mobility group protein B1 isoform 1 [Pan paniscus]
gi|397513187|ref|XP_003826903.1| PREDICTED: high mobility group protein B1 isoform 2 [Pan paniscus]
gi|397513189|ref|XP_003826904.1| PREDICTED: high mobility group protein B1 isoform 3 [Pan paniscus]
gi|397513191|ref|XP_003826905.1| PREDICTED: high mobility group protein B1 isoform 4 [Pan paniscus]
gi|397513193|ref|XP_003826906.1| PREDICTED: high mobility group protein B1 isoform 5 [Pan paniscus]
gi|397513195|ref|XP_003826907.1| PREDICTED: high mobility group protein B1 isoform 6 [Pan paniscus]
gi|397513197|ref|XP_003826908.1| PREDICTED: high mobility group protein B1 isoform 7 [Pan paniscus]
gi|410047671|ref|XP_003952424.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047673|ref|XP_003952425.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047675|ref|XP_003952426.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047677|ref|XP_003952427.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047679|ref|XP_003952428.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047682|ref|XP_003952429.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047686|ref|XP_003952430.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047688|ref|XP_003952431.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
Length = 215
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|48145843|emb|CAG33144.1| HMGB1 [Homo sapiens]
Length = 215
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|620098|emb|CAA56631.1| high mobility group protein [Mus musculus]
gi|71681313|gb|AAI00313.1| High mobility group box 1 [Mus musculus]
Length = 215
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|4504425|ref|NP_002119.1| high mobility group protein B1 [Homo sapiens]
gi|50950133|ref|NP_001002937.1| high mobility group protein B1 [Canis lupus familiaris]
gi|126352708|ref|NP_001075304.1| high mobility group protein B1 [Equus caballus]
gi|281182655|ref|NP_001162380.1| high mobility group protein B1 [Papio anubis]
gi|284005385|ref|NP_001164752.1| high mobility group protein B1 [Oryctolagus cuniculus]
gi|388453289|ref|NP_001252735.1| high mobility group protein B1 [Macaca mulatta]
gi|291397530|ref|XP_002715999.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
gi|291399645|ref|XP_002716268.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
gi|296203653|ref|XP_002748994.1| PREDICTED: high mobility group protein B1 isoform 2 [Callithrix
jacchus]
gi|297714815|ref|XP_002833818.1| PREDICTED: high mobility group protein B1-like [Pongo abelii]
gi|332242218|ref|XP_003270282.1| PREDICTED: high mobility group protein B1-like isoform 1 [Nomascus
leucogenys]
gi|332242222|ref|XP_003270284.1| PREDICTED: high mobility group protein B1-like isoform 3 [Nomascus
leucogenys]
gi|332242226|ref|XP_003270286.1| PREDICTED: high mobility group protein B1-like isoform 5 [Nomascus
leucogenys]
gi|332242228|ref|XP_003270287.1| PREDICTED: high mobility group protein B1-like isoform 6 [Nomascus
leucogenys]
gi|332242230|ref|XP_003270288.1| PREDICTED: high mobility group protein B1-like isoform 7 [Nomascus
leucogenys]
gi|332242232|ref|XP_003270289.1| PREDICTED: high mobility group protein B1-like isoform 8 [Nomascus
leucogenys]
gi|344284506|ref|XP_003414007.1| PREDICTED: high mobility group protein B1-like [Loxodonta africana]
gi|348583405|ref|XP_003477463.1| PREDICTED: high mobility group protein B1-like [Cavia porcellus]
gi|426375079|ref|XP_004054375.1| PREDICTED: high mobility group protein B1-like isoform 1 [Gorilla
gorilla gorilla]
gi|426375081|ref|XP_004054376.1| PREDICTED: high mobility group protein B1-like isoform 2 [Gorilla
gorilla gorilla]
gi|426375083|ref|XP_004054377.1| PREDICTED: high mobility group protein B1-like isoform 3 [Gorilla
gorilla gorilla]
gi|426375085|ref|XP_004054378.1| PREDICTED: high mobility group protein B1-like isoform 4 [Gorilla
gorilla gorilla]
gi|426375087|ref|XP_004054379.1| PREDICTED: high mobility group protein B1-like isoform 5 [Gorilla
gorilla gorilla]
gi|426375089|ref|XP_004054380.1| PREDICTED: high mobility group protein B1-like isoform 6 [Gorilla
gorilla gorilla]
gi|426375091|ref|XP_004054381.1| PREDICTED: high mobility group protein B1-like isoform 7 [Gorilla
gorilla gorilla]
gi|426375093|ref|XP_004054382.1| PREDICTED: high mobility group protein B1-like isoform 8 [Gorilla
gorilla gorilla]
gi|441624073|ref|XP_004088962.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624077|ref|XP_004088963.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624084|ref|XP_004088964.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624090|ref|XP_004088965.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624094|ref|XP_004088966.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|123369|sp|P09429.3|HMGB1_HUMAN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|61213476|sp|Q6YKA4.3|HMGB1_CANFA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|75076928|sp|Q4R844.3|HMGB1_MACFA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|119370722|sp|Q08IE6.3|HMGB1_HORSE RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028296|sp|B0CM99.1|HMGB1_CALJA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028297|sp|B1MTB0.1|HMGB1_CALMO RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028298|sp|A9RA84.1|HMGB1_PAPAN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|32327|emb|CAA31110.1| unnamed protein product [Homo sapiens]
gi|1435197|gb|AAB08987.1| non-histone chromatin protein HMG1 [Homo sapiens]
gi|13097234|gb|AAH03378.1| High-mobility group box 1 [Homo sapiens]
gi|21410205|gb|AAH30981.1| High-mobility group box 1 [Homo sapiens]
gi|30582719|gb|AAP35586.1| high-mobility group box 1 [Homo sapiens]
gi|37380997|gb|AAQ91389.1| high mobility group protein 1 [Homo sapiens]
gi|37548602|gb|AAN11296.1| high mobility group protein B1 [Canis lupus familiaris]
gi|37722533|gb|AAN11319.1| high mobility group B1 protein [Canis lupus familiaris]
gi|44890726|gb|AAH66889.1| High-mobility group box 1 [Homo sapiens]
gi|45709178|gb|AAH67732.1| High-mobility group box 1 [Homo sapiens]
gi|51476884|emb|CAH18408.1| hypothetical protein [Homo sapiens]
gi|54697178|gb|AAV38961.1| high-mobility group box 1 [Homo sapiens]
gi|60654989|gb|AAX32058.1| high mobility group box 1 [synthetic construct]
gi|61357252|gb|AAX41359.1| high-mobility group box 1 [synthetic construct]
gi|67968740|dbj|BAE00728.1| unnamed protein product [Macaca fascicularis]
gi|115354285|dbj|BAF33339.1| high-mobility group box 1 [Equus caballus]
gi|119628862|gb|EAX08457.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628864|gb|EAX08459.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628865|gb|EAX08460.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628866|gb|EAX08461.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628867|gb|EAX08462.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|121073803|gb|ABM47301.1| high mobility group box 1 protein [Homo sapiens]
gi|152112978|gb|ABS29271.1| high-mobility group box 1 [Homo sapiens]
gi|158256420|dbj|BAF84183.1| unnamed protein product [Homo sapiens]
gi|162415900|gb|ABX89266.1| high-mobility group box 1 (predicted) [Papio anubis]
gi|165934066|gb|ABY74560.1| high-mobility group box 1 (predicted) [Callithrix jacchus]
gi|169402702|gb|ACA53510.1| high-mobility group box 1 (predicted) [Callicebus moloch]
gi|183396417|gb|ACC62098.1| high-mobility group box 1 (predicted) [Rhinolophus ferrumequinum]
gi|193783763|dbj|BAG53745.1| unnamed protein product [Homo sapiens]
gi|196050399|gb|ACG64310.1| high-mobility group box 1 (predicted) [Otolemur garnettii]
gi|216397586|gb|ACJ72830.1| high-mobility group box 1 (predicted) [Oryctolagus cuniculus]
gi|261858262|dbj|BAI45653.1| high-mobility group box 1 [synthetic construct]
gi|335775462|gb|AEH58580.1| high mobility group protein B1-like protein [Equus caballus]
gi|351700460|gb|EHB03379.1| High mobility group protein B1 [Heterocephalus glaber]
gi|387542840|gb|AFJ72047.1| high mobility group protein B1 [Macaca mulatta]
Length = 215
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|402854944|ref|XP_003892110.1| PREDICTED: high mobility group protein B1-like isoform 1 [Papio
anubis]
gi|402854946|ref|XP_003892111.1| PREDICTED: high mobility group protein B1-like isoform 2 [Papio
anubis]
Length = 214
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|397495503|ref|XP_003818592.1| PREDICTED: high mobility group protein B1-like [Pan paniscus]
Length = 209
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|380793129|gb|AFE68440.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 195
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|380793127|gb|AFE68439.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 195
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|348551709|ref|XP_003461672.1| PREDICTED: high mobility group protein B1-like [Cavia porcellus]
Length = 214
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|119628863|gb|EAX08458.1| high-mobility group box 1, isoform CRA_b [Homo sapiens]
Length = 206
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|109510563|ref|XP_001059688.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392343404|ref|XP_003754879.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 213
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|26341410|dbj|BAC34367.1| unnamed protein product [Mus musculus]
Length = 178
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|41386729|ref|NP_788785.1| high mobility group protein B1 [Bos taurus]
gi|410947173|ref|XP_003980327.1| PREDICTED: high mobility group protein B1 [Felis catus]
gi|123367|sp|P10103.3|HMGB1_BOVIN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|417|emb|CAA31284.1| unnamed protein product [Bos taurus]
gi|73586656|gb|AAI02930.1| HMGB1 protein [Bos taurus]
gi|146231904|gb|ABQ13027.1| high-mobility group box 1 [Bos taurus]
gi|296481787|tpg|DAA23902.1| TPA: high mobility group protein B1 [Bos taurus]
Length = 215
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|6754208|ref|NP_034569.1| high mobility group protein B1 [Mus musculus]
gi|6981026|ref|NP_037095.1| high mobility group protein B1 [Rattus norvegicus]
gi|407262920|ref|XP_003945388.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
gi|52783618|sp|P63159.2|HMGB1_RAT RecName: Full=High mobility group protein B1; AltName:
Full=Amphoterin; AltName: Full=Heparin-binding protein
p30; AltName: Full=High mobility group protein 1;
Short=HMG-1
gi|52783747|sp|P63158.2|HMGB1_MOUSE RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|9082303|gb|AAF82799.1|AF275734_1 amphoterin [Rattus norvegicus]
gi|53382|emb|CAA78042.1| non-histone chromosomal high-mobility group 1 protein [Mus
musculus]
gi|56365|emb|CAA68526.1| unnamed protein product [Rattus norvegicus]
gi|202885|gb|AAA40729.1| Amphoterin [Rattus norvegicus]
gi|208488|gb|AAA73006.1| high mobility group 1 protein [synthetic construct]
gi|437102|gb|AAA20508.1| HMG-1 [Mus musculus]
gi|13879238|gb|AAH06586.1| High mobility group box 1 [Mus musculus]
gi|14250281|gb|AAH08565.1| High mobility group box 1 [Mus musculus]
gi|26332344|dbj|BAC29902.1| unnamed protein product [Mus musculus]
gi|26351305|dbj|BAC39289.1| unnamed protein product [Mus musculus]
gi|38512146|gb|AAH61779.1| High mobility group box 1 [Rattus norvegicus]
gi|51859468|gb|AAH81839.1| High mobility group box 1 [Rattus norvegicus]
gi|52789475|gb|AAH83067.1| High mobility group box 1 [Mus musculus]
gi|54648288|gb|AAH85090.1| High mobility group box 1 [Mus musculus]
gi|56788766|gb|AAH88402.1| High mobility group box 1 [Rattus norvegicus]
gi|61403558|gb|AAH91741.1| High mobility group box 1 [Mus musculus]
gi|62739258|gb|AAH94030.1| High mobility group box 1 [Mus musculus]
gi|74186113|dbj|BAE34226.1| unnamed protein product [Mus musculus]
gi|84040262|gb|AAI10668.1| Hmgb1 protein [Mus musculus]
gi|84105496|gb|AAI11469.1| High mobility group box 1 [Mus musculus]
gi|149034811|gb|EDL89531.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|149034812|gb|EDL89532.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|149034813|gb|EDL89533.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|195539712|gb|AAI68143.1| High mobility group box 1 [Rattus norvegicus]
Length = 215
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|432102789|gb|ELK30264.1| High mobility group protein B1 [Myotis davidii]
Length = 245
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|270005614|gb|EFA02062.1| hypothetical protein TcasGA2_TC007692 [Tribolium castaneum]
Length = 557
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
G K++GK+ K+ K DPN PKR SAFF F + R K +NP V + K G +W
Sbjct: 433 GEKQRGKKRKQVK-DPNAPKRSLSAFFWFSNDERAKVKSQNPEF-GVGDIAKELGRRWAD 490
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
P K+ YE+ A+K K+ Y K+M AY KK
Sbjct: 491 AEPEMKSKYEALADKDKARYEKEMTAYKKK 520
>gi|3342575|gb|AAC27652.1| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREGHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|346468357|gb|AEO34023.1| hypothetical protein [Amblyomma maculatum]
Length = 734
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
G K + R +K ++D NKPKRPPSA+F++L E R KK+NP+ + ++ V K AG WK
Sbjct: 543 GMKERKPRRQKKERDANKPKRPPSAYFLWLAENRDKIKKDNPSFS-ITDVTKRAGELWKE 601
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAY 123
++ +K+ +E +A + ++Y + M AY
Sbjct: 602 VT--DKSKWEQQAVEAAAKYKEAMAAY 626
>gi|296479353|tpg|DAA21468.1| TPA: high-mobility group box 1-like [Bos taurus]
Length = 215
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAVDDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ K++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHTKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKVDKARYEREMKTY 78
>gi|146412508|ref|XP_001482225.1| hypothetical protein PGUG_05245 [Meyerozyma guilliermondii ATCC
6260]
gi|146392989|gb|EDK41147.1| hypothetical protein PGUG_05245 [Meyerozyma guilliermondii ATCC
6260]
Length = 90
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+ PKR SA+ F E R + ENP + A VGK G KWK+M+ EK PYE+KAE
Sbjct: 13 DPDAPKRSLSAYMFFANENRDIIRAENPGI-AFGQVGKLLGEKWKAMNADEKVPYETKAE 71
Query: 111 KLKSEYGKKMNAYNKK 126
K Y K+ Y K+
Sbjct: 72 ADKKRYEKEKAEYAKR 87
>gi|343427561|emb|CBQ71088.1| probable NHP6B-nonhistone chromosomal protein [Sporisorium
reilianum SRZ2]
Length = 99
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR K+KKDP PKRP SA+ F ++ R+ K NP S VG+ G KW MS AEK
Sbjct: 16 KRTTKSKKDPAAPKRPLSAYMFFSQDHRERVKTANPEA-GFSDVGRLLGAKWNEMSDAEK 74
Query: 103 APYESKAEKLKSEYGKKMNAYNKKQ 127
PY A + K+ + AYNK++
Sbjct: 75 KPYNDMANRDKARAEAEKAAYNKRR 99
>gi|402591244|gb|EJW85174.1| hypothetical protein WUBG_03914 [Wuchereria bancrofti]
Length = 246
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 30 ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA 89
T ++ + + R+ R+K++K+DPN+P++P SA+ +F + + T K +PN + V K
Sbjct: 78 TTNQVTNRTSRRTIRKKRSKRDPNEPQKPVSAYALFFRDTQATIKGRSPNA-SFGEVSKI 136
Query: 90 AGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
W S+ K+ Y+ + E K +Y KK+ AY +Q
Sbjct: 137 VASMWDSLDCHAKSLYKQRTEMAKKDYLKKLAAYRAQQ 174
>gi|226530710|ref|NP_001144208.1| hypothetical protein [Zea mays]
gi|195638446|gb|ACG38691.1| hypothetical protein [Zea mays]
gi|413936487|gb|AFW71038.1| hypothetical protein ZEAMMB73_874920 [Zea mays]
Length = 487
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
+P SA+FV+ +E R T E NV +GK G +WK+M+ ++APYE A K K EY
Sbjct: 289 QPMSAYFVYSQERRATLVAEKKNV---PEIGKITGEEWKNMTEGQRAPYEEVARKQKEEY 345
Query: 117 GKKMNAYNKKQDGDEAS 133
K+M Y +K+ + AS
Sbjct: 346 HKQMEVYKQKKAEEAAS 362
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PKRP S+F +F +E RK +E P + S + KWK +S E+ + +KA
Sbjct: 408 DPNRPKRPASSFLLFSKEERKQLIEERPGINN-STLNALITVKWKELSGEERQAWNAKAA 466
Query: 111 KLKSEYGKKMNAYNKKQDG 129
+ Y K+M Y K Q
Sbjct: 467 PAMAAYKKEMEEYTKAQSS 485
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 56 KRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSE 115
K+P A+ ++L++ KKENP V G KWK++ EK PYE + + K
Sbjct: 166 KKPCPAYVLWLKDQWTEVKKENPEAD-FKEVSNTLGAKWKALGAEEKQPYEDRYRQEKEA 224
Query: 116 Y 116
Y
Sbjct: 225 Y 225
>gi|6680229|ref|NP_032278.1| high mobility group protein B2 [Mus musculus]
gi|1708259|sp|P30681.3|HMGB2_MOUSE RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|609169|emb|CAA86727.1| high mobility group 2 protein [Mus musculus]
gi|12834643|dbj|BAB22988.1| unnamed protein product [Mus musculus]
gi|12842629|dbj|BAB25672.1| unnamed protein product [Mus musculus]
gi|12849395|dbj|BAB28323.1| unnamed protein product [Mus musculus]
gi|52789313|gb|AAH83108.1| High mobility group box 2 [Mus musculus]
gi|55777186|gb|AAH46759.1| High mobility group box 2 [Mus musculus]
gi|74179666|dbj|BAE22481.1| unnamed protein product [Mus musculus]
gi|74179668|dbj|BAE22482.1| unnamed protein product [Mus musculus]
gi|74226660|dbj|BAE26982.1| unnamed protein product [Mus musculus]
Length = 210
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSENRPKIKIEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|11527222|gb|AAG36939.1|AF267733_1 high mobility group protein B2 [Mus musculus]
gi|12805183|gb|AAH02050.1| High mobility group box 2 [Mus musculus]
gi|74150328|dbj|BAE32214.1| unnamed protein product [Mus musculus]
gi|148672860|gb|EDL04807.1| mCG4647 [Mus musculus]
Length = 210
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSENRPKIKIEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|328350132|emb|CCA36532.1| Hepatocyte growth factor-regulated tyrosine kinase substrate
[Komagataella pastoris CBS 7435]
Length = 725
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKR SA+ F E R + ENP + +GK G KWK++ KAPYESK
Sbjct: 643 KKDPNAPKRSLSAYMFFANEQRDIVRSENPGIQ-FGEIGKLLGEKWKALDAEGKAPYESK 701
Query: 109 AEKLKSEYGKKMNAYNKKQDGDE 131
AE+ K Y + Y KKQ +E
Sbjct: 702 AEEDKKRYELEKAEYFKKQHEEE 724
>gi|183212219|gb|ACC54772.1| high mobility group box 3 [Xenopus borealis]
Length = 152
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
DPN PKRPPS FF+F EFR K NP +T + V K G W ++ +EK PY
Sbjct: 97 DPNAPKRPPSGFFLFCSEFRPNIKSTNPGIT-IGDVAKKLGEMWNNLGDSEKQPY 150
>gi|190195542|gb|ACE73639.1| high-mobility group box 1 (predicted) [Sorex araneus]
Length = 215
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDVA 171
Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|402865885|ref|XP_003897133.1| PREDICTED: high mobility group protein B1-like [Papio anubis]
Length = 221
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 92 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 150
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 151 EKKAAKLKEKYEKDIAAYRAKGKPDAA 177
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M +
Sbjct: 63 MAKADKARYEREMKTW 78
>gi|123368|sp|P07156.1|HMGB1_CRIGR RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|49483|emb|CAA68441.1| high mobility group protein [Cricetulus griseus]
Length = 180
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 51 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 109
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 110 EKKAAKLKEKYEKDIAAYRAKGKPDAA 136
>gi|391638|dbj|BAA03261.1| ORF1 [Gallus gallus]
Length = 298
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R+ + E K KDPN PKRP SA+ ++L R+ K ++P ++ ++ + K AG WK+MS
Sbjct: 119 RKKQVESKKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGIS-ITDLSKKAGELWKAMSK 177
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYN 124
+K ++ KAE K +Y K M Y+
Sbjct: 178 EKKEEWDRKAEDAKRDYEKAMKEYS 202
>gi|444515932|gb|ELV11007.1| High mobility group protein B3 [Tupaia chinensis]
Length = 212
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN P+RPPS F +F EF K NP ++ + V K W + S +EK PY +KA
Sbjct: 89 DPNAPERPPSGFLLFCSEFHLKIKSTNPGIS-IGDVAKKLVEMWNNFSDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYKKDVANYKSK 163
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYE 106
AK DP KPK S + F++ R+ KK+NP V + K +WK+MS EK+ ++
Sbjct: 2 AKSDPKKPKGKVSTYAFFVQTCREEHKKKNPEVPINFTEFSKKCSKRWKTMSGKEKSKFD 61
Query: 107 --SKAEKLKSEY 116
+KA+K++ ++
Sbjct: 62 EMAKADKIRYDW 73
>gi|157820087|ref|NP_001102843.1| high mobility group box 1 like [Rattus norvegicus]
gi|149043247|gb|EDL96779.1| rCG50935 [Rattus norvegicus]
Length = 214
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIPAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|15237042|ref|NP_192846.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|75266789|sp|Q9T012.1|HMG13_ARATH RecName: Full=High mobility group B protein 13; AltName:
Full=Nucleosome/chromatin assembly factor group D 13
gi|4850287|emb|CAB43043.1| 98b like protein [Arabidopsis thaliana]
gi|7267807|emb|CAB81209.1| 98b like protein [Arabidopsis thaliana]
gi|22136604|gb|AAM91621.1| putative 98b protein [Arabidopsis thaliana]
gi|332657570|gb|AEE82970.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
Length = 446
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 14 QEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKK-DPNKPKRPPSAFFVFLEEFRKT 72
QEAL+ + K+K T + +K K +KK + DPNKPK+P S++F+F ++ RK+
Sbjct: 335 QEALQ-----LLKKKEKTDNIIKKTKETAKNKKKNENVDPNKPKKPTSSYFLFCKDARKS 389
Query: 73 FKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+E+P + S V KW + EK Y SKA +L Y K++ YNK
Sbjct: 390 VLEEHPGINN-STVTAHISLKWMELGEEEKQVYNSKAAELMEAYKKEVEEYNK 441
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPK+P SA+ ++ E R K EN +V V K AG +WK++S +KAPY+ A+
Sbjct: 242 DPLKPKQPISAYLIYANERRAALKGENKSVIEV---AKMAGEEWKNLSEEKKAPYDQMAK 298
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDK 135
K K Y ++M Y + ++ + S K
Sbjct: 299 KNKEIYLQEMEGYKRTKEEEAMSQK 323
>gi|62660600|ref|XP_573625.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|392333089|ref|XP_003752789.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
Length = 209
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 55 PKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKS 114
PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KLK
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 115 EYGKKMNAYNKK 126
+Y K + AY K
Sbjct: 154 KYEKDIAAYRAK 165
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S + F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSLYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|339715208|ref|NP_001092721.2| high-mobility group box 1b [Danio rerio]
Length = 197
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F ++R K ENP ++ + + K G W S S K PY
Sbjct: 85 KKRFKDPNAPKRPPSAFFIFCGDYRPKIKGENPGLS-IGDIAKKLGEMWNSSSAEVKQPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + Y K
Sbjct: 144 EKKAAKLKEKYDKDIALYRTK 164
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +WK+MS EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y ++M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|74185387|dbj|BAE30167.1| unnamed protein product [Mus musculus]
Length = 181
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSENRPKIKIEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|148680486|gb|EDL12433.1| mCG1219 [Mus musculus]
Length = 215
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
>gi|260942113|ref|XP_002615355.1| hypothetical protein CLUG_04237 [Clavispora lusitaniae ATCC 42720]
gi|238850645|gb|EEQ40109.1| hypothetical protein CLUG_04237 [Clavispora lusitaniae ATCC 42720]
Length = 195
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 17/135 (12%)
Query: 25 GKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFK-------KEN 77
GK K + A L S S KK +DPN PK+P +A+++F E+ ++ K E
Sbjct: 36 GKNKKSKATLTSSSSV-----KKMARDPNLPKKPLNAYWIFFEKEKERVKAELEAGKSEK 90
Query: 78 PNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKSK 137
P + V K +WKSMS +K+PY+ E+ + Y +M +N+ +DG+ ++ S+
Sbjct: 91 PALD----VSKTLTERWKSMSDEQKSPYQKLYEEDRLRYQTEMTIFNQNKDGENSTTISQ 146
Query: 138 SEVNDEDEASGEEEH 152
N E +AS E+E+
Sbjct: 147 QN-NREPDASEEDEN 160
>gi|196010223|ref|XP_002114976.1| hypothetical protein TRIADDRAFT_64155 [Trichoplax adhaerens]
gi|190582359|gb|EDV22432.1| hypothetical protein TRIADDRAFT_64155 [Trichoplax adhaerens]
Length = 694
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K +DPN PKRP S + ++L++ R K ENP+ T V+ V K AG WKS+ EK +
Sbjct: 547 KNARDPNLPKRPLSGYMLWLQKQRDRIKNENPSFT-VAEVAKKAGEIWKSLKEEEKKKWN 605
Query: 107 SKAEKLKSEYGKKMNAYNKKQDGDEASDKSK 137
+++ KLK +Y K M YN++ + KSK
Sbjct: 606 NESAKLKEQYNKDMAEYNEQNQTKATTSKSK 636
>gi|91091374|ref|XP_973014.1| PREDICTED: similar to AGAP012335-PA [Tribolium castaneum]
Length = 712
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 56/98 (57%), Gaps = 12/98 (12%)
Query: 44 REKKAKK--DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
R+K+AKK D NKPKRP +AF ++L E R K +NP + ++ + K G WK + +
Sbjct: 540 RQKRAKKSKDENKPKRPSTAFMLWLNEMRDKIKADNPGI-KITEIAKKGGEMWKELK--D 596
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKSKSE 139
K+ +E KA K K EY K M Y EAS SKSE
Sbjct: 597 KSEWEGKAAKAKEEYNKAMKEY-------EASGGSKSE 627
>gi|238486744|ref|XP_002374610.1| nucleosome binding protein (Nhp6a), putative [Aspergillus flavus
NRRL3357]
gi|317144043|ref|XP_003189559.1| non-histone chromosomal protein 6 [Aspergillus oryzae RIB40]
gi|220699489|gb|EED55828.1| nucleosome binding protein (Nhp6a), putative [Aspergillus flavus
NRRL3357]
Length = 104
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 39 KRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
K +G R ++ KKDPN PKR SA+ F + R+ ++ENP ++ VGK G KWK++S
Sbjct: 9 KTKGTRVERKKKDPNAPKRGLSAYMFFANDNREKVREENPGIS-FGQVGKMLGEKWKALS 67
Query: 99 PAEKAPYESKAEKLKSEY 116
A++ PYE KA K Y
Sbjct: 68 EADRRPYEDKAAADKKRY 85
>gi|355565174|gb|EHH21663.1| hypothetical protein EGK_04785, partial [Macaca mulatta]
Length = 201
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 43 KREKKAK-KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
KRE K K KDPN PKRPPSAFF+F E+R K E+P ++ + VGK G W + +
Sbjct: 82 KRETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVGKKPGEMWNDTAADD 140
Query: 102 KAPYESKAEKLK 113
K PYE +K
Sbjct: 141 KHPYEKDIVHIK 152
>gi|345319487|ref|XP_001520125.2| PREDICTED: TOX high mobility group box family member 3-like
[Ornithorhynchus anatinus]
Length = 780
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E ++R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 414 KSATPSPSSSINEEDADESNRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 469
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 470 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 528
Query: 122 AY 123
AY
Sbjct: 529 AY 530
>gi|321476548|gb|EFX87508.1| hypothetical protein DAPPUDRAFT_306496 [Daphnia pulex]
Length = 191
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K KDPN PKR SAFF F + R K+++P T + + K G +W A KA Y
Sbjct: 93 RKQVKDPNAPKRSLSAFFWFCHDLRGHVKEQHPEYT-LGEIAKELGRRWGVSDDATKAQY 151
Query: 106 ESKAEKLKSEYGKKMNAYNK 125
+KAE+ ++ Y + MNAY K
Sbjct: 152 AAKAEQDRARYERDMNAYKK 171
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPY 105
+AK D NKP+ +A+ F++ R+ K + P+ V + G+WK M+ +K +
Sbjct: 3 RAKGDSNKPRGRMTAYAYFMQTCREEHKNKYPDENVVFLEFSRRCAGQWKLMTENDKKRF 62
Query: 106 ESKAEKLKSEYGKKMNAY 123
+ AE+ K + +M Y
Sbjct: 63 QGMAERDKLRFENEMRHY 80
>gi|186701221|gb|ACC91248.1| high mobility group HMG1/2 family protein [Arabidopsis halleri]
Length = 456
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPK+P S++F+F ++ RK +E P T S V KWK + EK Y KA
Sbjct: 375 DPNKPKKPASSYFLFSKDERKRLIEERPG-TNNSTVTALISVKWKELGEEEKQVYNKKAA 433
Query: 111 KLKSEYGKKMNAYNKKQDGDEAS 133
KL Y K++ AYNKK +S
Sbjct: 434 KLMEAYKKEVEAYNKKSAATTSS 456
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPK P SAF V+ E R ++++ +V V K G +WK++S +KAPYE A+
Sbjct: 251 DPLKPKHPVSAFLVYANERRAALREDSKSVVEV---AKITGEEWKNLSDKKKAPYEEVAK 307
Query: 111 KLKSEYGKKMNAYNKKQDGDEAS 133
K K Y + M Y + ++ + S
Sbjct: 308 KNKETYLQAMEEYKRTKEEEALS 330
>gi|167384542|ref|XP_001736998.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900416|gb|EDR26737.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 112
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN+PKRP + +F++L E R + K+E+P+ V+ + K A +WK++ EK Y++KA+
Sbjct: 23 PNRPKRPQTPYFLYLHEHRASIKEEHPDAK-VTEIAKIASEQWKALGEEEKKEYQAKADA 81
Query: 112 LKSEYGKKMNAYNKK 126
K +Y K M Y K
Sbjct: 82 AKEQYKKDMEKYTGK 96
>gi|255074117|ref|XP_002500733.1| hypothetical protein MICPUN_57400 [Micromonas sp. RCC299]
gi|226515996|gb|ACO61991.1| hypothetical protein MICPUN_57400 [Micromonas sp. RCC299]
Length = 646
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PK+P SA+ +F +E R ENP ++ ++ V K G +WK++ EK+ +E+KA+
Sbjct: 567 DPNAPKKPLSAYIIFTKERRSAVVAENPGLS-LTEVTKELGARWKAIGAEEKSVFEAKAK 625
Query: 111 KLKSEYGKKMNAYNKKQ 127
K K Y +M AY Q
Sbjct: 626 KDKERYAVEMEAYEATQ 642
>gi|115396468|ref|XP_001213873.1| nonhistone chromosomal protein 6A [Aspergillus terreus NIH2624]
gi|114193442|gb|EAU35142.1| nonhistone chromosomal protein 6A [Aspergillus terreus NIH2624]
Length = 101
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R ++ENP +T VGK G KWK++S ++ PYE KA
Sbjct: 19 DPNAPKRGLSAYMFFANENRDKVREENPGIT-FGQVGKMLGEKWKALSEDDRRPYEEKAA 77
Query: 111 KLKSEYGKKMNAYNKKQDGDEAS 133
K Y + +YN D DE S
Sbjct: 78 ADKKRYEDEKASYNAAGDEDEES 100
>gi|380792505|gb|AFE68128.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 183
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAY 123
E KA KLK +Y K++ AY
Sbjct: 145 EKKAAKLKEKYEKEIAAY 162
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|156552179|ref|XP_001605958.1| PREDICTED: high mobility group protein DSP1 [Nasonia vitripennis]
Length = 433
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 37 GSKRQGK-REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
G K G+ +++K KDPN PKR SAFF F + R K NP V + K G KW
Sbjct: 314 GEKVTGRGKKRKHIKDPNAPKRSLSAFFWFCNDERGKVKMLNPEY-GVGDIAKELGKKWS 372
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ-DG 129
P K YE+ AEK K+ Y ++M AY KKQ DG
Sbjct: 373 DAGPELKGKYEAMAEKDKARYEREMTAYKKKQKDG 407
>gi|66840992|emb|CAI64395.1| putative high mobility group protein [Triticum aestivum]
Length = 112
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D+ K GK K A KPKR P+ FF FL EFR + +++P V+AV KAAG KW
Sbjct: 4 DTAFKASGK-NKTATGGVAKPKRAPTPFFAFLAEFRPQYMEKHPEAKGVAAVTKAAGEKW 62
Query: 95 KSMSPAEKAPYESK 108
+SMS EKA Y K
Sbjct: 63 RSMSDEEKAKYGGK 76
>gi|443684506|gb|ELT88434.1| hypothetical protein CAPTEDRAFT_172235 [Capitella teleta]
Length = 734
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SA+F++L E R+ K ENP+ V+ + K AG +WK ++ +K +E A
Sbjct: 546 DPNKPKRPQSAYFLWLNEMREEIKAENPD-AGVTDIAKLAGQRWKEVT--DKTRWEGLAV 602
Query: 111 KLKSEYGKKMNAY 123
K K Y K M Y
Sbjct: 603 KAKESYEKAMEEY 615
>gi|242064692|ref|XP_002453635.1| hypothetical protein SORBIDRAFT_04g009610 [Sorghum bicolor]
gi|241933466|gb|EES06611.1| hypothetical protein SORBIDRAFT_04g009610 [Sorghum bicolor]
Length = 488
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
+P SA+FV+ +E R E NV +GK G +WK+M+ A+KAPYE A K K EY
Sbjct: 290 QPMSAYFVYSQERRAALVAEKKNV---PEIGKITGEEWKNMTEAQKAPYEKVARKQKEEY 346
Query: 117 GKKMNAYNKKQDGDEAS 133
K+M Y +K+ + AS
Sbjct: 347 QKQMEVYKQKKIEEAAS 363
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
RQ K+++ A DPN+PKRP S+F +F +E RK +E P + S++ KWK +S
Sbjct: 400 RQKKKQENA--DPNRPKRPASSFLLFSKEARKQLLEERPGINN-SSLNALISVKWKELSG 456
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYNKKQDGD 130
E+ + +KA + Y K+M Y K Q
Sbjct: 457 EERQAWNAKAAPAMAAYKKEMEEYTKAQSSS 487
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 56 KRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSE 115
K+P A+ ++L++ K+ENP V G KWK++S EK PYE + + K
Sbjct: 166 KKPCPAYVLWLKDQWTEVKEENPEAD-FKEVSSTLGTKWKALSAEEKQPYEERYRQEKEA 224
Query: 116 Y 116
Y
Sbjct: 225 Y 225
>gi|449509245|ref|XP_004163534.1| PREDICTED: FACT complex subunit SSRP1-like, partial [Cucumis
sativus]
Length = 303
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR S F F + R+ KK NP ++ + +G+ G KW MS EK PYESKA
Sbjct: 215 DPNAPKRAISGFMFFSKMERENIKKSNPGIS-FTELGRVLGDKWNKMSAEEKEPYESKAR 273
Query: 111 KLKSEYGKKMNAYNKKQ 127
K Y ++++ Y Q
Sbjct: 274 DDKKRYKEEISGYKNPQ 290
>gi|75218951|sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein 1
gi|2104679|emb|CAA66480.1| transcription factor [Vicia faba var. minor]
Length = 642
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR S F F + R+ KK NP + + + VG+ G KWK++S EK PYE+KA+
Sbjct: 554 DPNAPKRALSGFMFFSQMERENLKKTNPGI-SFTDVGRVLGEKWKNLSAEEKEPYEAKAQ 612
Query: 111 KLKSEYGKKMNAYNKKQ 127
K Y +++ Y Q
Sbjct: 613 ADKKRYKDEISGYKNPQ 629
>gi|126327421|ref|XP_001367294.1| PREDICTED: high mobility group protein B1-like isoform 2
[Monodelphis domestica]
Length = 216
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 DMAKADKVRYEREMKTY 78
>gi|444729709|gb|ELW70116.1| High mobility group protein B1 [Tupaia chinensis]
Length = 215
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M +
Sbjct: 63 MAKADKAHYEREMKTF 78
>gi|600761|gb|AAA57042.1| high mobility group 1 protein [Mus musculus]
Length = 215
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|320585897|gb|EFW98576.1| nucleosome-binding protein [Grosmannia clavigera kw1407]
Length = 94
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 40 RQGKREKK-AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
+ GK EK+ +KKDPN PKR SA+ F E R+ + ENP ++ VGK G +WK+++
Sbjct: 9 KTGKVEKRRSKKDPNAPKRGLSAYMFFANEQRENVRDENPGIS-FGQVGKILGERWKALN 67
Query: 99 PAEKAPYESKAEKLKSEYGKKMNAYN 124
++ PYE+KA K Y AYN
Sbjct: 68 EKQRTPYEAKAAADKKRYEDAKAAYN 93
>gi|119596659|gb|EAW76253.1| hCG2042470 [Homo sapiens]
Length = 118
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K K DPN PKRP S FF+F EF K NP ++ + V K G W +++ +EK PY
Sbjct: 8 KGGKNDPNAPKRPLSGFFLFCSEFCPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPY 66
Query: 106 ESKAEKLK 113
+K KLK
Sbjct: 67 VTKVAKLK 74
>gi|406866133|gb|EKD19173.1| HMG box protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 525
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 10/114 (8%)
Query: 21 DRKVGKRKAATAKLDSGSKRQG-------KREKKAKKDPNKPKRPPSAFFVFLEEFRKTF 73
DR V ++K K++ G + G K + K D N P+RPPSA+ +F + R+
Sbjct: 78 DRNVEEQKTPGVKVEGGKEANGCAPGVKRKYRRHPKPDDNAPERPPSAYVIFSNKMREDL 137
Query: 74 KKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
K N + + + K G W+++SP+EK PYE +A K Y ++ Y K +
Sbjct: 138 KGRN---LSFTEIAKLVGENWQNLSPSEKDPYEQQASAAKERYNNELAEYKKTE 188
>gi|384499401|gb|EIE89892.1| hypothetical protein RO3G_14603 [Rhizopus delemar RA 99-880]
Length = 352
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 14 QEALKPNDRKVGKRKA------ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLE 67
Q AL PN + + +A K + K+ +R KK K P PK P SA+ +L
Sbjct: 154 QRALHPNSMYIRRSRAELKEAGKMIKEEPSDKKTARRVKKKIKSPGIPKHPLSAYMWYLT 213
Query: 68 EFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
E R K P+ + V + K KW +M+ E+AP+++KA+ K Y ++M Y +
Sbjct: 214 EVRPKTMKSFPS-SNVGQISKYCAEKWHTMTDEERAPWKTKAQVDKERYAREMQLYAIQN 272
Query: 128 DGD 130
D +
Sbjct: 273 DHE 275
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
P + RPP+A+ +F ++ R+ K ++P + V + K +W+ MS EK Y ++A +
Sbjct: 91 PIRVTRPPNAYLLFNKKMRRVLKDQDPTMN-VGEISKQIAERWRKMSKEEKEMYVNEANR 149
Query: 112 LKSE 115
LK E
Sbjct: 150 LKQE 153
>gi|167396118|ref|XP_001741910.1| non-histone chromosomal protein [Entamoeba dispar SAW760]
gi|165893321|gb|EDR21615.1| non-histone chromosomal protein, putative [Entamoeba dispar SAW760]
Length = 111
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN+PK+P SA+F++L E R + K+E+P++ + + K A +WK++ EK Y++KA+
Sbjct: 23 PNRPKKPQSAYFLYLNEHRASIKEEHPDIK-FTEISKVASEQWKALGEEEKKEYQAKADA 81
Query: 112 LKSEYGKKMNAYNKKQDG 129
+ +Y K M Y K+
Sbjct: 82 AREQYKKDMEKYTGKKQA 99
>gi|169869341|ref|XP_001841237.1| hypothetical protein CC1G_11400 [Coprinopsis cinerea okayama7#130]
gi|116497705|gb|EAU80600.1| hypothetical protein CC1G_11400 [Coprinopsis cinerea okayama7#130]
Length = 255
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRP S++ +F E R K++NPN+T + KWK+M+ +K Y +
Sbjct: 73 DPNAPKRPASSYILFQNEVRNELKRQNPNLTNPELL-TLISEKWKNMTDEQKETYNQQML 131
Query: 111 KLKSEYGKKMNAYNKK 126
K K EY + NAY+ +
Sbjct: 132 KAKEEYSQAKNAYDNR 147
>gi|242781691|ref|XP_002479852.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|242781695|ref|XP_002479853.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|242781700|ref|XP_002479854.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|218719999|gb|EED19418.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|218720000|gb|EED19419.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|218720001|gb|EED19420.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
Length = 103
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKR SA+ F E R+ + ENP + A A+G+ G WK +S AE+ PYE
Sbjct: 17 KRKKDPNAPKRGLSAYMFFANENRERVRDENPGI-AFGALGRKLGELWKGLSDAERKPYE 75
Query: 107 SKAEKLKSEY 116
KA K Y
Sbjct: 76 DKAAADKKRY 85
>gi|83014391|ref|XP_918585.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
Length = 213
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|255074119|ref|XP_002500734.1| high-mobility protein [Micromonas sp. RCC299]
gi|226515997|gb|ACO61992.1| high-mobility protein [Micromonas sp. RCC299]
Length = 153
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PK+P SA+ +F +E R ENP ++ ++ V K G +WK++ EK+ +E+KA+
Sbjct: 74 DPNAPKKPLSAYIIFTKERRSAVVAENPGLS-LTEVTKELGARWKAIGAEEKSVFEAKAK 132
Query: 111 KLKSEYGKKMNAYNKKQ 127
K K Y +M AY Q
Sbjct: 133 KDKERYAVEMEAYEATQ 149
>gi|167744990|pdb|2YRQ|A Chain A, Solution Structure Of The Tandem Hmg Box Domain From Human
High Mobility Group Protein B1
Length = 173
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 93 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 151
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 152 EKKAAKLKEKYEKDIAAYRAK 172
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKA 109
DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E A
Sbjct: 12 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 71
Query: 110 EKLKSEYGKKMNAY 123
+ K+ Y ++M Y
Sbjct: 72 KADKARYEREMKTY 85
>gi|270014157|gb|EFA10605.1| hypothetical protein TcasGA2_TC012866 [Tribolium castaneum]
Length = 840
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 56/98 (57%), Gaps = 12/98 (12%)
Query: 44 REKKAKK--DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
R+K+AKK D NKPKRP +AF ++L E R K +NP + ++ + K G WK + +
Sbjct: 668 RQKRAKKSKDENKPKRPSTAFMLWLNEMRDKIKADNPGI-KITEIAKKGGEMWKELK--D 724
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKSKSE 139
K+ +E KA K K EY K M Y EAS SKSE
Sbjct: 725 KSEWEGKAAKAKEEYNKAMKEY-------EASGGSKSE 755
>gi|444722397|gb|ELW63094.1| High mobility group protein B1 [Tupaia chinensis]
Length = 178
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEPPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYDKDIAAYRAKGKPDAA 171
>gi|992639|gb|AAB08831.1| high mobility group protein-2 (HMG-2) [Ambystoma mexicanum]
Length = 216
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP-YESKA 109
DPN PKR PSAFF+F E R K + P ++ + K G KW +P +K P +E KA
Sbjct: 92 DPNAPKRLPSAFFLFCSEHRLKIKADCPGLS-IGDTAKKLGEKWSEQTPKDKIPSFEQKA 150
Query: 110 EKLKSEYGKKMNAYNKK 126
KLK +Y K + AY K
Sbjct: 151 AKLKEKYEKDIAAYRAK 167
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+M+ EK +E
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMNAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 63 MAKGDKVRYDREMKSY 78
>gi|109469394|ref|XP_001076232.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392338825|ref|XP_003753645.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 214
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTASDDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K AY K D A
Sbjct: 145 EKKAAKLKEKYEKDTAAYRAKGKPDAA 171
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S V K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEVSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|124512426|ref|XP_001349346.1| high mobility group protein [Plasmodium falciparum 3D7]
gi|23499115|emb|CAD51195.1| high mobility group protein [Plasmodium falciparum 3D7]
Length = 99
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKA 109
DP PKR SA+ ++++ R KE P + V+ VGK G W +SPA+KAPYE KA
Sbjct: 20 DPLAPKRALSAYMFYVKDKRLEIIKEKPELAKDVAQVGKLIGEAWGQLSPAQKAPYEKKA 79
Query: 110 EKLKSEYGKKMNAYNKK 126
+ K Y K++ Y KK
Sbjct: 80 QLDKVRYSKEIEEYRKK 96
>gi|320589146|gb|EFX01608.1| chromatin-associated protein [Grosmannia clavigera kw1407]
Length = 593
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K + K D P+RPPSA+ +F + R+ K +N + T ++ K G W++++PAE+
Sbjct: 110 KYRRHPKPDECAPERPPSAYVLFSNKMREKLKGQNLSFTEIA---KLVGENWQTLTPAER 166
Query: 103 APYESKAEKLKSEYGKKMNAYNK 125
PYE++A+ K +Y M Y K
Sbjct: 167 KPYETEAQAAKDKYNHAMVVYKK 189
>gi|149635755|ref|XP_001508702.1| PREDICTED: high mobility group protein B1-like [Ornithorhynchus
anatinus]
Length = 215
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ R+ KK++P+ S K +WK+MS EK +E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDAAVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 DMAKADKVRYEREMKTY 78
>gi|397502952|ref|XP_003822100.1| PREDICTED: high mobility group protein B3-like [Pan paniscus]
gi|410056873|ref|XP_003317692.2| PREDICTED: high mobility group protein B3-like [Pan troglodytes]
Length = 221
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN KRP S FF+F EF K NP ++ + + K G W + S EK PY +K
Sbjct: 106 KKDPNALKRPLSGFFLFCSEFHPKIKSTNPGIS-IGDMAKKLGEMWINYSDREKQPYITK 164
Query: 109 AEKLKSEYGKKMNAYNKKQDGDEA 132
A LK +Y K + Y K D A
Sbjct: 165 AADLKEKYEKDVADYKSKGKFDSA 188
>gi|328769557|gb|EGF79601.1| hypothetical protein BATDEDRAFT_89692 [Batrachochytrium
dendrobatidis JAM81]
Length = 99
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
++G +KK++KDP+ PKRP SAF +F +E R ++ENP+ + +GK G W+ ++
Sbjct: 14 KRGDDKKKSRKDPDAPKRPLSAFMIFSKENRPRIREENPDAS-FGDLGKLLGAAWRELND 72
Query: 100 AEKAPYESKAEKLKSEYGKKMNAY 123
+K Y KA++ K Y ++M+ Y
Sbjct: 73 KDKQVYTDKADEDKGRYEREMSTY 96
>gi|354476918|ref|XP_003500670.1| PREDICTED: high mobility group protein B4-like [Cricetulus griseus]
Length = 180
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 30 ATAKLDSGSKR------QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD + GKR K+ K+DP+ P++PPS+F +F + K +NPN + V
Sbjct: 62 ALAKLDKARYQEEMMNYMGKRRKRRKRDPHAPRQPPSSFLLFSLDHYAQLKHDNPNWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
V KA G W S +K PYE KA L+++Y + + Y K+
Sbjct: 122 Q-VAKATGKMWSMTSNVDKQPYEQKAALLRAKYFEDVENYRKQ 163
Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
+PK S++ F+ +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 8 RPKVNVSSYIHFMLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|45935025|gb|AAS79547.1| At4g11080 [Arabidopsis thaliana]
gi|46367464|emb|CAG25858.1| hypothetical protein [Arabidopsis thaliana]
Length = 450
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
Query: 14 QEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKK-DPNKPKRPPSAFFVFLEEFRKT 72
QEAL+ + K+K T + +K K +KK + DPNKPK+P S++F+F ++ RK+
Sbjct: 339 QEALQ-----LLKKKEKTDNIIKKTKETAKNKKKNENVDPNKPKKPTSSYFLFCKDARKS 393
Query: 73 FKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+E+P + S V KW + EK Y SKA L Y K++ YNK
Sbjct: 394 VLEEHPGINN-STVTAHITLKWMELGEEEKQVYNSKAAALMEAYKKEVEEYNK 445
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPK+P SA+ ++ E R K EN +V V K G +WK++S +KAPY+ A+
Sbjct: 246 DPLKPKQPISAYLIYANERRAALKGENKSVIEV---AKITGEEWKNLSEEQKAPYDKMAK 302
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDK 135
K K Y ++M Y + ++ + S K
Sbjct: 303 KNKEIYLQEMEGYKRTKEEEAMSQK 327
>gi|366998295|ref|XP_003683884.1| hypothetical protein TPHA_0A03740 [Tetrapisispora phaffii CBS 4417]
gi|357522179|emb|CCE61450.1| hypothetical protein TPHA_0A03740 [Tetrapisispora phaffii CBS 4417]
Length = 93
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R K ENP+V+ VG+ G KWK+++ EK P+E+KAE
Sbjct: 17 DPNAPKRALSAYMFFANETRDIVKAENPDVS-FGQVGRILGEKWKALTAEEKIPFEAKAE 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKALYN 89
>gi|355766483|gb|EHH62519.1| hypothetical protein EGM_20887 [Macaca fascicularis]
Length = 198
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
D N PKRPPS FF+F +F K NP ++ + + K G WK+++ +EK PY +KA
Sbjct: 76 DSNAPKRPPSGFFLFSSKFCPKMKSTNPGIS-IGDMVKKLGEMWKNLNDSEKQPYITKAA 134
Query: 111 KLKSEY 116
KLK +Y
Sbjct: 135 KLKDKY 140
>gi|45187563|ref|NP_983786.1| ADL310Wp [Ashbya gossypii ATCC 10895]
gi|74694642|sp|Q75B82.1|NHP6_ASHGO RecName: Full=Non-histone chromosomal protein 6
gi|44982301|gb|AAS51610.1| ADL310Wp [Ashbya gossypii ATCC 10895]
gi|374106998|gb|AEY95906.1| FADL310Wp [Ashbya gossypii FDAG1]
Length = 94
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R + ENP ++ VG+ G KWK++S EK PYE+KAE
Sbjct: 17 DPNAPKRAMSAYMFFANENRDIVRAENPGIS-FGQVGRVLGEKWKALSDDEKQPYEAKAE 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|50548527|ref|XP_501733.1| YALI0C11671p [Yarrowia lipolytica]
gi|74635076|sp|Q6CC79.1|NHP6_YARLI RecName: Full=Non-histone chromosomal protein 6
gi|49647600|emb|CAG82043.1| YALI0C11671p [Yarrowia lipolytica CLIB122]
Length = 103
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F + R + +NP + A VGKA G KWK+++ AEK PYE KA
Sbjct: 21 DPNAPKRALSAYMFFANDNRDAIRADNPGI-AFGQVGKALGEKWKTLTDAEKVPYEEKAT 79
Query: 111 KLKSEYGKKMNAY 123
K Y + AY
Sbjct: 80 ADKKRYEDEKAAY 92
>gi|159476440|ref|XP_001696319.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158282544|gb|EDP08296.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 179
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PK+P ++F F R++ K ENP + A VGK G KWK +S +K Y+ KA
Sbjct: 57 DPNAPKKPLTSFMYFSNAIRESVKSENPGI-AFGEVGKVIGEKWKGLSADDKKEYDEKAA 115
Query: 111 KLKSEYGKKMNAYN 124
K K Y K+M +Y
Sbjct: 116 KDKERYQKEMESYG 129
>gi|444510699|gb|ELV09703.1| High mobility group protein B2 [Tupaia chinensis]
Length = 233
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 40/75 (53%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN PKRPPSAFF+F E K E+P ++ K G W S +K P E KA K
Sbjct: 92 PNVPKRPPSAFFLFCSEHHPKIKSEHPGLSIGDTEKKKLGEMWSEQSAKDKQPCEQKAAK 151
Query: 112 LKSEYGKKMNAYNKK 126
LK +Y K + AY K
Sbjct: 152 LKKKYEKDIAAYRAK 166
Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K D NKP+ S++ F++ + KK++P+ + A K KWK+MS EK+ +E
Sbjct: 3 KGDHNKPRGKMSSYAFFVQTCGEEHKKKHPDSSVNFAEFSKKCSEKWKAMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|353241760|emb|CCA73553.1| hypothetical protein PIIN_07506 [Piriformospora indica DSM 11827]
Length = 312
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN PKRPPSA+ ++ RK K +NP +T +G+ + W +S EK PY
Sbjct: 113 KDPNAPKRPPSAYLLYQNAIRKEIKDKNPTMTYAEVLGEIS-KMWSGLSAEEKKPYLDAT 171
Query: 110 EKLKSEYGKKMNAY 123
E K EY K AY
Sbjct: 172 EIAKGEYEKSKAAY 185
>gi|363755760|ref|XP_003648095.1| hypothetical protein Ecym_7459 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892131|gb|AET41278.1| hypothetical protein Ecym_7459 [Eremothecium cymbalariae
DBVPG#7215]
Length = 94
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R + ENP ++ VG+ G KWK++S EK PYE+KAE
Sbjct: 17 DPNAPKRAMSAYMFFANENRDIVRAENPGIS-FGQVGRVLGEKWKALSDDEKQPYEAKAE 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|112491006|pdb|2GZK|A Chain A, Structure Of A Complex Of Tandem Hmg Boxes And Dna
Length = 159
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R+G+ +KK K DPN PKRPPSAFF+F E+R K E+P ++ + V K G W + +
Sbjct: 75 RKGETKKKFK-DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAA 132
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYNKK 126
+K PYE KA KLK +Y K + AY K
Sbjct: 133 DDKQPYEKKAAKLKEKYEKDIAAYRAK 159
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 56 KRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSE 115
KRP +AF V+ + R+ ENP + S + K G +WK ++ AEK P+ +A+KL++
Sbjct: 6 KRPMNAFIVWSRDQRRKMALENPRMRN-SEISKQLGYQWKMLTEAEKWPFFQEAQKLQAM 64
Query: 116 YGKKMNAY 123
+ +K Y
Sbjct: 65 HREKYPNY 72
>gi|37779034|gb|AAP20177.1| high mobility group protein [Pagrus major]
Length = 200
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F +FR K + P ++ + K G W S S EK PY
Sbjct: 85 KKRFKDPNAPKRPPSAFFLFCADFRPKVKGDYPGLS-IGDTAKKLGEMWNSSSAEEKQPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
E KA KLK +Y K + AY K D S
Sbjct: 144 EKKAAKLKEKYDKDIVAYRTKGKVDSES 171
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + A K +WK+MSP EK +E
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKRCSERWKTMSPKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 AKLDKVRYEREMKNY 77
>gi|296227498|ref|XP_002759405.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 215
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK +DPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFEDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGKMWSNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|119623033|gb|EAX02628.1| hCG1644442 [Homo sapiens]
Length = 201
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN KRP S FF+F EF K NP ++ + + K G W + S EK PY +K
Sbjct: 86 KKDPNALKRPLSGFFLFCSEFHPKIKSTNPGIS-IGDMAKKLGEMWINYSDREKQPYITK 144
Query: 109 AEKLKSEYGKKMNAYNKKQDGDEA 132
A LK +Y K + Y K D A
Sbjct: 145 AADLKEKYEKDVADYKSKGKFDSA 168
>gi|353351504|emb|CBX36444.1| high-mobility-group-1 protein [Plecoglossus altivelis]
Length = 204
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F +FR K E P T + V K G W +K PY
Sbjct: 85 KKRFKDPNAPKRPPSAFFIFCADFRAKVKGETPGPT-IGDVAKKLGEMWNGTCAEDKQPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKAAKLKEKYEKDIAAYRAK 164
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +WK+MS EK +E
Sbjct: 3 KDPTKPRGKTSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 AKLDKVRYEREMKNY 77
>gi|302847869|ref|XP_002955468.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
gi|300259310|gb|EFJ43539.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
Length = 645
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K+E+K KDPN PK+ + F F R+ K ENP + A +GK G +WK M EK
Sbjct: 544 KKERK-PKDPNAPKKNLTGFMYFSNANREKVKAENPGI-AFGEIGKMLGERWKGMGADEK 601
Query: 103 APYESKAEKLKSEYGKKMNAY 123
APYE A K K Y + M AY
Sbjct: 602 APYEQMAAKDKVRYAEAMKAY 622
>gi|358372276|dbj|GAA88880.1| nucleosome binding protein (Nhp6a) [Aspergillus kawachii IFO 4308]
Length = 104
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKR SA+ F + R+ ++ENP ++ VGK G +WK++S ++ PYE K
Sbjct: 20 KKDPNAPKRGLSAYMFFANDNREKVREENPGIS-FGQVGKMLGERWKALSDTDRRPYEEK 78
Query: 109 AEKLKSEYGKKMNAYNKKQDGDEAS 133
A K Y + +YN + DE S
Sbjct: 79 AAADKKRYEDEKASYNAAAEEDEES 103
>gi|409075359|gb|EKM75740.1| hypothetical protein AGABI1DRAFT_116212 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198009|gb|EKV47935.1| hypothetical protein AGABI2DRAFT_191645 [Agaricus bisporus var.
bisporus H97]
Length = 262
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 24 VGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
KRKA A D + ++ KR K KDPN PKRP S++ +F E RK K ++P +T
Sbjct: 51 THKRKADVALDDDEAPKKRKRNAKP-KDPNAPKRPASSYILFQNEIRKQLKDQHPELTNA 109
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
+ WK MS EKA Y E K Y + AY+ +
Sbjct: 110 ELLN-MISDIWKKMSEDEKATYHKLVEDAKERYSQDKKAYDSR 151
>gi|427794389|gb|JAA62646.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 604
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K +D NKPKRP +AF +F+ +FRK + P V+A+ K G +W+SMS +K PY
Sbjct: 250 KPARDANKPKRPGTAFMLFMGDFRKEMAGKEPE-GGVAALAKLGGERWRSMSEEDKRPYV 308
Query: 107 SKAEKLKSEYGKKMNAYNKKQDGDEA 132
+ + K +Y + M Y +KQ E+
Sbjct: 309 ERQNEEKMKYEQNMEEYRRKQQTAES 334
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 55 PKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKS 114
PKR +A+ F + +R+ KK + + GK GKW +MS +K P+ S A + +
Sbjct: 181 PKRATTAYITFTQWYREEMKKSGRQIPRIGDFGKECAGKWNTMSDEDKQPFLSAAARDRE 240
Query: 115 EYGKKMNAYNKKQDGD 130
Y ++M Y +D +
Sbjct: 241 RYKREMAVYKPARDAN 256
>gi|444726553|gb|ELW67082.1| High mobility group protein B1 [Tupaia chinensis]
Length = 111
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN +R PSAFF+F E+R K E+P ++ + V K G W + + +K PY KA
Sbjct: 39 KDPNASQRSPSAFFLFSSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAAGDKQPYGKKA 97
Query: 110 EKLKSEYGKKMNAY 123
KLK +Y K + AY
Sbjct: 98 AKLKEKYEKDIAAY 111
>gi|395520861|ref|XP_003764541.1| PREDICTED: high mobility group protein B1 [Sarcophilus harrisii]
Length = 230
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 100 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 158
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 159 EKKAAKLKEKYEKDIAAYRAK 179
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAP 104
K K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK
Sbjct: 14 KMGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGK 73
Query: 105 YESKAEKLKSEYGKKMNAY 123
+E A+ K Y ++M Y
Sbjct: 74 FEDMAKADKVRYEREMKTY 92
>gi|367052681|ref|XP_003656719.1| hypothetical protein THITE_2121767 [Thielavia terrestris NRRL 8126]
gi|347003984|gb|AEO70383.1| hypothetical protein THITE_2121767 [Thielavia terrestris NRRL 8126]
Length = 545
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Query: 14 QEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTF 73
Q+A+K G R A T + +KR+ +R K D N P+RPPSA+ +F + R+
Sbjct: 83 QDAVKTESPTPGGRGAITVVV---TKRKYRRHPK--PDENAPERPPSAYVLFSNKMREEL 137
Query: 74 KKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
K N + + + K G W++++ AEK P+ES+A+ +K +Y + Y
Sbjct: 138 KGRN---LSFAEIAKLVGVNWQNLTAAEKEPFESQAQAIKDKYLSDLAVY 184
>gi|300677968|gb|ADK27291.1| high-mobility-group B1b [Gekko japonicus]
Length = 215
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK +DPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFEDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|350409390|ref|XP_003488719.1| PREDICTED: FACT complex subunit Ssrp1-like [Bombus impatiens]
Length = 736
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KD NKPKRPP+AF ++L R+ K ENP + AV+ + K G W+ + +K+ +E KA
Sbjct: 544 KDANKPKRPPTAFMIWLNSARERIKAENPGI-AVTEIAKKGGEMWRELK--DKSEWEQKA 600
Query: 110 EKLKSEYGKKMNAY 123
K K EY M Y
Sbjct: 601 AKAKKEYTASMKEY 614
>gi|50421411|ref|XP_459256.1| DEHA2D17710p [Debaryomyces hansenii CBS767]
gi|74631679|sp|Q6BRB4.1|NHP6_DEBHA RecName: Full=Non-histone chromosomal protein 6
gi|49654923|emb|CAG87430.1| DEHA2D17710p [Debaryomyces hansenii CBS767]
Length = 92
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA- 109
DP+ PKR SA+ F E R + ENP ++ VGK G KWK+++P +K PYE+KA
Sbjct: 15 DPDAPKRSLSAYMFFANENRDIVRAENPGIS-FGQVGKLLGEKWKALTPEDKIPYENKAD 73
Query: 110 ------EKLKSEYGKK 119
EK K+EY KK
Sbjct: 74 TDKKRYEKEKAEYAKK 89
>gi|212526742|ref|XP_002143528.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
gi|212526744|ref|XP_002143529.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
gi|210072926|gb|EEA27013.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
gi|210072927|gb|EEA27014.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
Length = 103
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKR SA+ F E R+ + ENP + A A+G+ G WK +S +E+ PYE
Sbjct: 17 KRKKDPNAPKRGLSAYMFFANENRERVRDENPGI-AFGALGRKLGELWKGLSDSERKPYE 75
Query: 107 SKAEKLKSEY 116
KA K Y
Sbjct: 76 DKAAADKKRY 85
>gi|340713595|ref|XP_003395326.1| PREDICTED: FACT complex subunit Ssrp1-like [Bombus terrestris]
Length = 735
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KD NKPKRPP+AF ++L R+ K ENP + AV+ + K G W+ + +K+ +E KA
Sbjct: 544 KDANKPKRPPTAFMIWLNSARERIKAENPGI-AVTEIAKKGGEMWRELK--DKSEWEQKA 600
Query: 110 EKLKSEYGKKMNAY 123
K K EY M Y
Sbjct: 601 AKAKKEYTASMKEY 614
>gi|74138677|dbj|BAE27155.1| unnamed protein product [Mus musculus]
Length = 215
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K ++P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGKHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|444722008|gb|ELW62714.1| High mobility group protein B1 [Tupaia chinensis]
Length = 224
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF F E+R K E+P ++ + V K G W + + K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFFFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWSNTAADAKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
>gi|327268628|ref|XP_003219098.1| PREDICTED: high mobility group protein B2-like [Anolis
carolinensis]
Length = 209
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 13/118 (11%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K +KDPN PKRPPSAFF+F E R K ++P ++ + K G W + +K P+E
Sbjct: 85 KKRKDPNAPKRPPSAFFLFCSEHRPKIKSDHPGLS-IGDTAKKLGEMWSLQTAKDKLPFE 143
Query: 107 SKAEKLKSEYGKKMNAYNKKQDGDEASDKSKSEVNDEDEASGEEEHQLEPEPEPEQDE 164
KA KLK +Y K + AY A DKS + +G ++ + EPE+D+
Sbjct: 144 QKALKLKEKYDKDIAAY-------RAKDKSDAGKKGPGRPTGSKK-----KAEPEEDD 189
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYE 106
K DPNKP+ S++ F++ R+ KK++P+ + A K +W++MS EK +E
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWRTMSAKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 62 DMAKGDKARYDREMKNY 78
>gi|444728196|gb|ELW68660.1| High mobility group protein B1 [Tupaia chinensis]
Length = 221
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ V K G W + + +K PY
Sbjct: 101 KKKFKDPNAPKRPPSAFFLFCSEYRSKIKGEHPGLSN-GDVAKKLGEIWNNTAADDKQPY 159
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 160 EKKAAKLKEKYEKDIAAYRAKGKPDAA 186
>gi|444726214|gb|ELW66754.1| High mobility group protein B1 [Tupaia chinensis]
Length = 160
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G+ EKK K DPN PKRPPSAF +F E+R K E+P + + V K G W + +
Sbjct: 31 KGETEKKVK-DPNAPKRPPSAFLLFCSEYRPKIKGEHPGLF-IGDVAKKLGEMWNNTAAG 88
Query: 101 EKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
K PYE KA KLK +Y K + AY K D A
Sbjct: 89 GKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA 120
>gi|296418046|ref|XP_002838655.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634611|emb|CAZ82846.1| unnamed protein product [Tuber melanosporum]
Length = 103
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKR SA+ F E R+ + +NP + A VGK G +WK++S ++ PYE+K
Sbjct: 17 KKDPNAPKRGLSAYMFFANEQRENVRNDNPGI-AFGQVGKVLGERWKALSEKQRQPYEAK 75
Query: 109 AEKLKSEYGKKMNAYN 124
A K Y + AYN
Sbjct: 76 AAADKKRYEDEKAAYN 91
>gi|145233003|ref|XP_001399874.1| non-histone chromosomal protein 6 [Aspergillus niger CBS 513.88]
gi|317026969|ref|XP_003188583.1| non-histone chromosomal protein 6 [Aspergillus niger CBS 513.88]
gi|134056796|emb|CAK37704.1| unnamed protein product [Aspergillus niger]
gi|350634700|gb|EHA23062.1| hypothetical protein ASPNIDRAFT_206990 [Aspergillus niger ATCC
1015]
Length = 103
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKR SA+ F + R+ ++ENP ++ VGK G +WK++S ++ PYE K
Sbjct: 19 KKDPNAPKRGLSAYMFFANDNREKVREENPGIS-FGQVGKMLGERWKALSDTDRRPYEEK 77
Query: 109 AEKLKSEYGKKMNAYNKKQDGDEAS 133
A K Y + +YN + DE S
Sbjct: 78 AAADKKRYEDEKASYNAAAEEDEES 102
>gi|444725503|gb|ELW66067.1| Trem-like transcript 1 protein [Tupaia chinensis]
Length = 668
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR PS FF+F EFR K NP ++ + V K G W ++S +EK PY +
Sbjct: 586 DPNAPKRRPSVFFLFCSEFRLKIKSTNPGIS-IGDVAKKLGEMWNNLSDSEKQPYITNGA 644
Query: 111 K 111
K
Sbjct: 645 K 645
>gi|344241535|gb|EGV97638.1| High mobility group protein B1 [Cricetulus griseus]
gi|344241536|gb|EGV97639.1| High mobility group protein B1 [Cricetulus griseus]
Length = 154
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K E K KDPN PKRPP AFF+F E+ ++ NP ++ + V K G W + + +K
Sbjct: 31 KGEIKKFKDPNAPKRPPLAFFLFCCEYHPKNQRRNPGLS-IGDVAKKLGEMWNNTAADDK 89
Query: 103 APYESKAEKLKSEYGKKMNAYNKK 126
YE KA +LK +Y K AY K
Sbjct: 90 QTYEKKAAELKEKYKKDTAAYRTK 113
>gi|444722479|gb|ELW63171.1| High mobility group protein B2 [Tupaia chinensis]
Length = 147
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN PKRPPSAFF+F E K E+P ++ + K G W S +K P E KA K
Sbjct: 30 PNTPKRPPSAFFLFCSEHLPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPCEQKAAK 88
Query: 112 LKSEYGKKMNAYNKK 126
LK +Y K + AY K
Sbjct: 89 LKEKYEKDIAAYRAK 103
>gi|444716453|gb|ELW57303.1| High mobility group protein B1 [Tupaia chinensis]
Length = 213
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K E K KDPN PKRPPSAFF+F E+R +E+P ++ + V K W +++ K
Sbjct: 70 KGETKKFKDPNAPKRPPSAFFLFCSEYRPKI-REHPGLS-IGDVAKKLEEMWNNIAADGK 127
Query: 103 APYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
YE KA KLK +Y K + A+ K + A
Sbjct: 128 QSYEKKAAKLKGKYRKDITAFQGKGTANAA 157
>gi|443895134|dbj|GAC72480.1| HMG box-containing protein [Pseudozyma antarctica T-34]
Length = 99
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR K+KKDP PKRP SA+ F ++ R+ K+ NP VG+ G KWK MS AEK
Sbjct: 16 KRTTKSKKDPAAPKRPLSAYMFFSQDHRERVKQANPEA-GFGDVGRLLGAKWKEMSEAEK 74
Query: 103 APYESKAEK 111
PY A +
Sbjct: 75 KPYNDMATR 83
>gi|148701877|gb|EDL33824.1| mCG140646 [Mus musculus]
Length = 207
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+ K E+P + V V K G W + + +K PY
Sbjct: 87 KKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL-CVGDVAKKLGELWNNTAGDDKQPY 145
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 146 EKKAAKLKEKYEKDIAAYRAKGKPDAA 172
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKCED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|427793709|gb|JAA62306.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 640
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K +D NKPKRP +AF +F+ +FRK + P V+A+ K G +W+SMS +K PY
Sbjct: 286 KPARDANKPKRPGTAFMLFMGDFRKEMAGKEPE-GGVAALAKLGGERWRSMSEEDKRPYV 344
Query: 107 SKAEKLKSEYGKKMNAYNKKQDGDEA 132
+ + K +Y + M Y +KQ E+
Sbjct: 345 ERQNEEKMKYEQNMEEYRRKQQTAES 370
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 55 PKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKS 114
PKR +A+ F + +R+ KK + + GK GKW +MS +K P+ S A + +
Sbjct: 217 PKRATTAYITFTQWYREEMKKSGRQIPRIGDFGKECAGKWNTMSDEDKQPFLSAAARDRE 276
Query: 115 EYGKKMNAYNKKQDGD 130
Y ++M Y +D +
Sbjct: 277 RYKREMAVYKPARDAN 292
>gi|46394418|gb|AAS91553.1| AmphiHMG1/2 [Branchiostoma belcheri tsingtauense]
Length = 222
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G R K+ KKDPN PKR SAFF++ + R + +P+ V + K G +WK +S +
Sbjct: 84 EGGRRKRKKKDPNAPKRAMSAFFMYCADARPKVRAAHPDFQ-VGDIAKILGKQWKEISDS 142
Query: 101 EKAPYESKAEKLKSEYGKKMNAYNKKQDG 129
+KA YE KA+ K+ Y K++ Y + G
Sbjct: 143 DKAKYEKKAQTEKARYQKELAEYKRSGGG 171
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV-SAVGKAAGGKWKSMSPAEKAPYESK 108
KD NKPK SA+ F++E R+ +K+ PN V + + +WK+M+ EK +++
Sbjct: 3 KDKNKPKGKMSAYACFVQECRREHEKKYPNKQVVFTEFSQKCASRWKTMNDDEKKRFQAL 62
Query: 109 AEKLKSEYGKKMNAY 123
AE K Y + M Y
Sbjct: 63 AEADKRRYEQDMAKY 77
>gi|324510950|gb|ADY44569.1| TOX high mobility group box family member 3 [Ascaris suum]
Length = 247
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R++K KKDPN+P++P SA+ +F + + K PN T V K W ++ K
Sbjct: 78 RKRKPKKDPNEPQKPVSAYALFFRDTQAAIKGRTPNAT-FGEVSKIVASMWDALDGGAKN 136
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQDGDEASDKSKSEVNDEDEASGEEE 151
Y+ K E K +Y K++ AY Q ++S S E+ ++++ S E
Sbjct: 137 SYKQKTESAKRDYLKRLAAYRASQISQDSSGCSYPEIRNDNKGSHACE 184
>gi|147866286|emb|CAN79926.1| hypothetical protein VITISV_042446 [Vitis vinifera]
Length = 644
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR S F F + R+ KK P + A + VG+ G KWK M+ EK PYE+KA+
Sbjct: 555 DPNAPKRAMSGFMFFSQTERENIKKSTPGI-AFTEVGRVLGDKWKKMTAEEKEPYEAKAQ 613
Query: 111 KLKSEYGKKMNAY 123
K Y +++ Y
Sbjct: 614 ADKKRYRDEISGY 626
>gi|225452706|ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis vinifera]
gi|296082859|emb|CBI22160.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR S F F + R+ KK P + A + VG+ G KWK M+ EK PYE+KA+
Sbjct: 555 DPNAPKRAMSGFMFFSQTERENIKKSTPGI-AFTEVGRVLGDKWKKMTAEEKEPYEAKAQ 613
Query: 111 KLKSEYGKKMNAY 123
K Y +++ Y
Sbjct: 614 ADKKRYRDEISGY 626
>gi|126274287|ref|XP_001387507.1| Nonhistone chromosomal protein 6A [Scheffersomyces stipitis CBS
6054]
gi|126213377|gb|EAZ63484.1| Nonhistone chromosomal protein 6A, partial [Scheffersomyces
stipitis CBS 6054]
Length = 85
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDP+ PKR SA+ F E R + ENP ++ VGK G KWK+++ EK PYE+K
Sbjct: 12 KKDPDAPKRSLSAYMFFANENRDIVRAENPGIS-FGQVGKLLGEKWKALTGEEKGPYENK 70
Query: 109 AEKLKSEY 116
AE K Y
Sbjct: 71 AEADKKRY 78
>gi|302851253|ref|XP_002957151.1| hypothetical protein VOLCADRAFT_77427 [Volvox carteri f.
nagariensis]
gi|300257558|gb|EFJ41805.1| hypothetical protein VOLCADRAFT_77427 [Volvox carteri f.
nagariensis]
Length = 94
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
REKK K DPN PK+P A+ F ++ R+ K ENP ++ V+ +GK G WK +S +K
Sbjct: 14 REKKVK-DPNAPKKPLGAYMWFCKDMRERVKAENPGMS-VTDIGKRLGELWKEVSEEDKK 71
Query: 104 PYESKAEKLKSEYGKKMNAYNK 125
Y +AE K Y K+ AYNK
Sbjct: 72 KYLKQAEDDKERYNKEAAAYNK 93
>gi|390463605|ref|XP_003733066.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 214
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y + AY K D A
Sbjct: 145 EKKAAKLKEKYEMDIAAYRAKGKPDAA 171
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|413943061|gb|AFW75710.1| hypothetical protein ZEAMMB73_996127 [Zea mays]
Length = 95
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 35/43 (81%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAV 86
R+ KA KDPNKPKR P+AFFV + EFRK FK++NP + +V+AV
Sbjct: 35 RKAKAGKDPNKPKRAPNAFFVLMGEFRKEFKEKNPKIKSVAAV 77
>gi|344228278|gb|EGV60164.1| hypothetical protein CANTEDRAFT_110112 [Candida tenuis ATCC 10573]
Length = 89
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 8/78 (10%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDP+ PKR SA+ F + R + ENP + A VG+ G +WK+++ EK PYE K
Sbjct: 11 KKDPDAPKRSLSAYMFFANDNRDIVRAENPGI-AFGQVGRLLGERWKALTADEKIPYEKK 69
Query: 109 A-------EKLKSEYGKK 119
A EK K+EY KK
Sbjct: 70 ANDDKKRYEKQKAEYAKK 87
>gi|340923867|gb|EGS18770.1| hypothetical protein CTHT_0053790 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 576
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 66/113 (58%), Gaps = 8/113 (7%)
Query: 13 SQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKT 72
SQ+A+K ++K R+ T + +KR+ +R K D N P+RPPSA+ +F + R+
Sbjct: 82 SQDAVKSENQKGDGREPVTMIV---TKRKYRRHPK--PDENAPERPPSAYVLFANKMRED 136
Query: 73 FKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
K N + T ++ K G W++++P EK PYE++A++ K +Y ++ Y K
Sbjct: 137 LKGRNLSFTEMA---KLVGENWQNLTPEEKEPYETQAQRCKDKYLAELAEYKK 186
>gi|40352857|gb|AAH64790.1| Hmgb1 protein [Mus musculus]
Length = 215
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPP AFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|82952271|ref|XP_889413.1| PREDICTED: high mobility group protein B1-like isoform 2 [Mus
musculus]
gi|407263905|ref|XP_003945567.1| PREDICTED: high mobility group protein B1-like isoform 1 [Mus
musculus]
Length = 215
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 43 KREKKAK-KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
KRE K K KDPN PKRPPSAFF+F +R K E+P ++ + V K G W + + +
Sbjct: 82 KRETKKKFKDPNAPKRPPSAFFLFCSGYRPKIKGEHPGLS-IGDVAKKRGEMWNNTAADD 140
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
K PYE KA KLK +Y K + AY K D A
Sbjct: 141 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA 171
>gi|344243983|gb|EGW00087.1| High mobility group protein B4 [Cricetulus griseus]
Length = 106
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
GKR K+ K+DP+ P++PPS+F +F + K +NPN + V V KA G W S
Sbjct: 5 MGKRRKRRKRDPHAPRQPPSSFLLFSLDHYAQLKHDNPNWSVVQ-VAKATGKMWSMTSNV 63
Query: 101 EKAPYESKAEKLKSEYGKKMNAYNKK 126
+K PYE KA L+++Y + + Y K+
Sbjct: 64 DKQPYEQKAALLRAKYFEDVENYRKQ 89
>gi|427793707|gb|JAA62305.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 529
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K +D NKPKRP +AF +F+ +FRK + P V+A+ K G +W+SMS +K PY
Sbjct: 271 KPARDANKPKRPGTAFMLFMGDFRKEMAGKEPE-GGVAALAKLGGERWRSMSEEDKRPYV 329
Query: 107 SKAEKLKSEYGKKMNAYNKKQ 127
+ + K +Y + M Y +KQ
Sbjct: 330 ERQNEEKMKYEQNMEEYRRKQ 350
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 55 PKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKS 114
PKR +A+ F + +R+ KK + + GK GKW +MS +K P+ S A + +
Sbjct: 202 PKRATTAYITFTQWYREEMKKSGRQIPRIGDFGKECAGKWNTMSDEDKQPFLSAAARDRE 261
Query: 115 EYGKKMNAYNKKQDGD 130
Y ++M Y +D +
Sbjct: 262 RYKREMAVYKPARDAN 277
>gi|410928771|ref|XP_003977773.1| PREDICTED: TOX high mobility group box family member 4-B-like
[Takifugu rubripes]
Length = 684
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
G ++ + KKDPN+P++P SA+ +F + + K +NP+ + V K W S++ +
Sbjct: 285 GNKKGRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAS-FGEVSKIVASMWDSLAEEQ 343
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKSKSEVNDEDEASGEEEHQLEPEP 158
K Y+ K E K EY K + AY Q +D+ ++ + + Q P P
Sbjct: 344 KQVYKRKTEAAKKEYLKALAAYKANQLSQPITDEMEAAPSSPTQMPNYTPAQQAPCP 400
>gi|322797840|gb|EFZ19748.1| hypothetical protein SINV_09636 [Solenopsis invicta]
Length = 203
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
+++K KD N PKR SAFF F + R K NP V + K G KW P K+
Sbjct: 90 KKRKHIKDHNAPKRSLSAFFWFCNDERGKVKMLNPEY-GVGDIAKELGKKWSDADPETKS 148
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
YE+ AEK K+ Y ++M AY KK D A
Sbjct: 149 KYEAMAEKDKARYEREMTAYKKKMQNDGA 177
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEK 111
+KP+ +A+ F++ R+ KK++P V K +WK+MS EK + AEK
Sbjct: 7 SKPRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDIEKKRFHEMAEK 66
Query: 112 LKSEYGKKMNAYNKKQDGDEASDKSKSEVNDED 144
K Y +M Y + ++ K + + D +
Sbjct: 67 DKKRYDTEMQNYTPPKGENKGRGKKRKHIKDHN 99
>gi|321478856|gb|EFX89813.1| hypothetical protein DAPPUDRAFT_232871 [Daphnia pulex]
Length = 190
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R++K KDPN PKR SAFF F + R K +P T V + K G +W + + K+
Sbjct: 91 RKRKQVKDPNAPKRSLSAFFWFCNDERGNVKAAHPEYT-VGDIAKDLGKQWGEVDESTKS 149
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQDG 129
YE+ AEK K+ Y ++ NAY KK G
Sbjct: 150 KYEAMAEKDKARYERENNAYKKKLKG 175
Score = 42.4 bits (98), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV-SAVGKAAGGKWKSMSPAEKAPY 105
+AK D NKP+ +A+ F++ R+ KK++P+ V S K +WK+MS EK +
Sbjct: 3 RAKADANKPRGRMTAYAFFVQTCREEHKKKHPDENVVFSEFSKKCAERWKTMSDKEKKRF 62
Query: 106 ESKAEKLKSEYGKKMNAY 123
+ AE+ K + +M Y
Sbjct: 63 QEMAERDKVRFDDEMRHY 80
>gi|72051831|ref|XP_792040.1| PREDICTED: high mobility group protein 1 homolog
[Strongylocentrotus purpuratus]
gi|115767180|ref|XP_001176807.1| PREDICTED: high mobility group protein 1 homolog
[Strongylocentrotus purpuratus]
Length = 204
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
++AKKDP+ PKR SAFF+F + R K+E+ + + V + +A WK+++PA+KA Y
Sbjct: 89 RRAKKDPDAPKRNLSAFFLFSRDERGAIKQEHKDWS-VGKIAQALAAIWKTITPADKAKY 147
Query: 106 ESKAEKLKSEYGKKMNAY 123
+++A K Y ++M A+
Sbjct: 148 DAEAALEKQRYMREMAAF 165
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPNKP+ SA+ F+++ R++ + N TA S K +WK M +K P+
Sbjct: 3 KQKKDPNKPRGRMSAYAYFVQD-RRSKAEGQVNFTAFS---KECADRWKHMDDGDKRPFN 58
Query: 107 SKAEKLKSEYGKKMNAY 123
K+ K Y ++M+ Y
Sbjct: 59 DKSASDKIRYDREMSGY 75
>gi|359472717|ref|XP_003631191.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein
6-like [Vitis vinifera]
Length = 502
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 14/103 (13%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP K K P S FF F +E R E+ NV ++ K AG +WK+M+ +K PYE A+
Sbjct: 344 DPLKLKHPISTFFXFSKERRAALLAEDKNVLEIT---KIAGEEWKNMTEKQKRPYEEIAK 400
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDKSKSEVNDEDEASGEEEHQ 153
K K++Y ++M Y KQ DEA++ K G+EEH
Sbjct: 401 KNKAKYQEEMKLY--KQQKDEAAENLK---------KGKEEHM 432
>gi|332025497|gb|EGI65660.1| High mobility group protein DSP1 [Acromyrmex echinatior]
Length = 305
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
+++K KD N PKR SAFF F + R K NP V + K G KW P K+
Sbjct: 192 KKRKHIKDHNAPKRSLSAFFWFCNDERGKVKMLNPEY-GVGDIAKELGKKWSDADPETKS 250
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQDGDEASDKSKSEVNDEDEASGEEE 151
YE+ AEK K+ Y ++M AY KK D A ++ N S EE
Sbjct: 251 KYEAMAEKDKARYEREMTAYKKKMQNDGAPMVGGAQANQTTIKSDSEE 298
>gi|410983521|ref|XP_003998087.1| PREDICTED: TOX high mobility group box family member 3 [Felis
catus]
Length = 561
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E ++R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 204 KSATPSPSSSINEEDADESNRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 259
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 260 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 318
Query: 122 AY 123
AY
Sbjct: 319 AY 320
>gi|443897201|dbj|GAC74542.1| putative N2 [Pseudozyma antarctica T-34]
Length = 1388
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA------ 89
S ++ GK K KDPN PK+P SA+F+FL R +PN+T G+
Sbjct: 1290 SAQRKAGKSRKGNLKDPNAPKKPLSAYFLFLRAIRA-----DPNMTQAVFEGEQETTKQS 1344
Query: 90 --AGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
A KW+S+S EK PY +AE K+ Y + Y
Sbjct: 1345 VLAAAKWRSLSETEKQPYLDRAEADKARYERLRREY 1380
>gi|427780835|gb|JAA55869.1| Putative dorsal switch protein 1 [Rhipicephalus pulchellus]
Length = 508
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K +D NKPKRP +AF +F+ +FRK + P V+A+ K G +W+SMS +K PY
Sbjct: 250 KPARDANKPKRPGTAFMLFMGDFRKEMAGKEPE-GGVAALAKLGGERWRSMSEEDKRPYV 308
Query: 107 SKAEKLKSEYGKKMNAYNKKQDGDEA 132
+ + K +Y + M Y +KQ E+
Sbjct: 309 ERQNEEKMKYEQNMEEYRRKQQTAES 334
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 55 PKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKS 114
PKR +A+ F + +R+ KK + + GK GKW +MS +K P+ S A + +
Sbjct: 181 PKRATTAYITFTQWYREEMKKSGRQIPRIGDFGKECAGKWNTMSDEDKQPFLSAAARDRE 240
Query: 115 EYGKKMNAYNKKQDGD 130
Y ++M Y +D +
Sbjct: 241 RYKREMAVYKPARDAN 256
>gi|213407940|ref|XP_002174741.1| predicted protein [Schizosaccharomyces japonicus yFS275]
gi|212002788|gb|EEB08448.1| predicted protein [Schizosaccharomyces japonicus yFS275]
Length = 134
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K +KDPN PKR SAF F R+ K+ENP T +G G KWK+++ EK PY
Sbjct: 7 KTRRKDPNAPKRNMSAFMFFSMSNREKIKEENPEAT-FGQIGSLLGKKWKTLTAVEKEPY 65
Query: 106 ESKAEKLKSEY 116
E KA K K Y
Sbjct: 66 EEKARKDKERY 76
>gi|159162414|pdb|1HME|A Chain A, Structure Of The Hmg Box Motif In The B-Domain Of Hmg1
gi|159162415|pdb|1HMF|A Chain A, Structure Of The Hmg Box Motif In The B-Domain Of Hmg1
Length = 77
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PYE KA
Sbjct: 2 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPYEKKA 60
Query: 110 EKLKSEYGKKMNAYNKK 126
KLK +Y K + AY K
Sbjct: 61 AKLKEKYEKDIAAYRAK 77
>gi|327260386|ref|XP_003215015.1| PREDICTED: FACT complex subunit SSRP1-like [Anolis carolinensis]
Length = 705
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R+ + E K KDPN PKRP SA+ ++L R + E+P + +V+ V K AG WK+MS
Sbjct: 530 RKRQSEGKKGKDPNAPKRPLSAYMLWLNANRDKIRSESPGM-SVTDVSKKAGELWKAMSK 588
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYN 124
+K ++ KAE K +Y K M YN
Sbjct: 589 EKKEEWDRKAEDAKRDYEKAMKEYN 613
>gi|332375054|gb|AEE62668.1| unknown [Dendroctonus ponderosae]
Length = 306
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
G K++GK+ K+ K DPN PKR SAFF F + R K +NP V + K G +W
Sbjct: 193 GEKQRGKKRKQIK-DPNAPKRSLSAFFWFSNDERGKVKAQNPEY-GVGDIAKELGRRWAD 250
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
P ++ +E+ A+K K Y K+M AY KK
Sbjct: 251 ADPEVRSKFEALADKDKIRYEKEMTAYKKK 280
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
KK +KP+ +A+ F++ R+ KK++P V A K +WK+M EK +
Sbjct: 113 KKGDSKPRGRMTAYAFFVQTCREEHKKKHPEENVVFAEFSKKCAERWKTMLDKEKKRFHE 172
Query: 108 KAEKLKSEYGKKMNAYN 124
AE K Y +M +Y
Sbjct: 173 MAETDKKRYDTEMQSYT 189
>gi|302762326|ref|XP_002964585.1| hypothetical protein SELMODRAFT_166865 [Selaginella moellendorffii]
gi|300168314|gb|EFJ34918.1| hypothetical protein SELMODRAFT_166865 [Selaginella moellendorffii]
Length = 647
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN PKR S F F R+ KK P ++ V K G +WK+MS EK P+ES+A
Sbjct: 561 PNAPKRALSGFMYFSLAERENLKKSTPGIS-FKDVAKTLGERWKAMSKDEKEPFESQARV 619
Query: 112 LKSEYGKKMNAYNKKQDGDEASD 134
K Y K+M YNK G +D
Sbjct: 620 DKERYTKQMQGYNKGNAGGSTAD 642
>gi|302814252|ref|XP_002988810.1| hypothetical protein SELMODRAFT_159743 [Selaginella moellendorffii]
gi|300143381|gb|EFJ10072.1| hypothetical protein SELMODRAFT_159743 [Selaginella moellendorffii]
Length = 647
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN PKR S F F R+ KK P ++ V K G +WK+MS EK P+ES+A
Sbjct: 561 PNAPKRALSGFMYFSLAERENLKKSTPGIS-FKDVAKTLGERWKAMSKDEKEPFESQARV 619
Query: 112 LKSEYGKKMNAYNKKQDGDEASD 134
K Y K+M YNK G +D
Sbjct: 620 DKERYTKQMQGYNKGNAGGSTAD 642
>gi|67524855|ref|XP_660489.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|74597086|sp|Q5B995.1|NHP6_EMENI RecName: Full=Non-histone chromosomal protein 6
gi|40744280|gb|EAA63456.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|259486178|tpe|CBF83812.1| TPA: Non-histone chromosomal protein 6
[Source:UniProtKB/Swiss-Prot;Acc:Q5B995] [Aspergillus
nidulans FGSC A4]
Length = 106
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKR SA+ F + R ++ENP ++ VGK G KWKS+S E+ PYE K
Sbjct: 21 KKDPNAPKRGLSAYMFFANDNRDKVREENPGIS-FGQVGKMLGEKWKSLSDKERKPYEDK 79
Query: 109 AEKLKSEYGKKMNAY 123
A K Y + AY
Sbjct: 80 AAADKKRYEDEKAAY 94
>gi|449459450|ref|XP_004147459.1| PREDICTED: FACT complex subunit SSRP1-like [Cucumis sativus]
Length = 642
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR S F F + R+ KK NP ++ + +G+ G KW MS EK PYESKA
Sbjct: 554 DPNAPKRAISGFMFFSKMERENIKKSNPGIS-FTELGRVLGDKWNKMSAEEKEPYESKAR 612
Query: 111 KLKSEYGKKMNAYNKKQ 127
K Y ++++ Y Q
Sbjct: 613 DDKKRYKEEISGYKNPQ 629
>gi|156843619|ref|XP_001644876.1| hypothetical protein Kpol_1065p34 [Vanderwaltozyma polyspora DSM
70294]
gi|156115528|gb|EDO17018.1| hypothetical protein Kpol_1065p34 [Vanderwaltozyma polyspora DSM
70294]
Length = 93
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R K ENP+V+ VG+ G KWK+M+ +K P+++KAE
Sbjct: 17 DPNAPKRALSAYMFFANETRDIVKAENPDVS-FGQVGRILGEKWKAMTDEDKQPFDAKAE 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|402086642|gb|EJT81540.1| hypothetical protein GGTG_01518 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 481
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 7/99 (7%)
Query: 27 RKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAV 86
R ATA + +KR+ +R KA D N P+RPPSA+ +F + R K ++ T ++
Sbjct: 96 RADATAGV--ATKRKYRRHPKA--DENAPERPPSAYVLFSNKMRDDLKDQHLTFTEIA-- 149
Query: 87 GKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
K G W++++P+EK PYE++A+ K +Y + Y +
Sbjct: 150 -KLVGEHWQALAPSEKEPYETQAQTAKDKYNHDLAEYKR 187
>gi|444721179|gb|ELW61931.1| High mobility group protein B1 [Tupaia chinensis]
Length = 212
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + + K G W + + K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-MGDIAKKLGELWNNTAADGKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKNIAAYRAKGKPDAA 171
>gi|149236976|ref|XP_001524365.1| hypothetical protein LELG_04337 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451900|gb|EDK46156.1| hypothetical protein LELG_04337 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 93
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+ PKR SA+ F E R + ENP +T VGK G KWK++ +K PYE+KAE
Sbjct: 16 DPDAPKRSLSAYMFFANENRDIVRAENPGIT-FGQVGKLLGEKWKALGSEDKVPYENKAE 74
Query: 111 KLKSEYGKKMNAYNKK 126
K Y K+ Y KK
Sbjct: 75 ADKKRYEKEKAEYAKK 90
>gi|297265082|ref|XP_001112681.2| PREDICTED: nuclear autoantigen Sp-100 isoform 9 [Macaca mulatta]
Length = 838
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K EKK KDP+ P+RPP AFF+F + R K E+P + ++ V K W + + A+K
Sbjct: 722 KGEKKKFKDPSAPRRPPLAFFMFCSKNRPKIKGEHPGL-SIDGVVKKLAEMWNNTAVADK 780
Query: 103 APYESKAEKLKSEYGKKMNAYNKK 126
Y+ A KLK +Y K + AY K
Sbjct: 781 QFYKKVAAKLKEKYKKDIAAYRAK 804
>gi|307191141|gb|EFN74839.1| High mobility group protein DSP1 [Camponotus floridanus]
Length = 305
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
+++K KD N PKR SAFF F + R K NP V + K G KW P K+
Sbjct: 193 KKRKHIKDHNAPKRSLSAFFWFCNDERGKVKMLNPEY-GVGDIAKELGKKWSDADPETKS 251
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQDGDEASDKSKSEVNDEDEASGEEE 151
YE+ AEK K+ Y ++M AY KK D A + N ++ EEE
Sbjct: 252 KYEAMAEKDKARYEREMTAYKKKIQNDGAPMMGGAPANQTVKSDSEEE 299
>gi|226372550|gb|ACO51900.1| High mobility group protein B2 [Rana catesbeiana]
Length = 212
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 4 AKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFF 63
AKGKG E L D+ +R+ T +G++ K KKDPN PKRPPSAFF
Sbjct: 54 AKGKGKF----EDLAKGDKVRYEREMKTY-----IPPKGEKGGKRKKDPNAPKRPPSAFF 104
Query: 64 VFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
+F E R K + P ++ + K G W +P +K P+E KA KLK +Y K + AY
Sbjct: 105 LFCSENRPQIKNDTPGLS-IGDTAKKLGELWSEQTPKDKQPFEQKAAKLKEKYEKDVAAY 163
Query: 124 NKKQDGD 130
K D
Sbjct: 164 RAKGSSD 170
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYE 106
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS K +E
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVSFAEFSKKCSERWKTMSAKGKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 DLAKGDKVRYEREMKTY 78
>gi|403286915|ref|XP_003934714.1| PREDICTED: high mobility group protein B1-like isoform 1 [Saimiri
boliviensis boliviensis]
gi|403286917|ref|XP_003934715.1| PREDICTED: high mobility group protein B1-like isoform 2 [Saimiri
boliviensis boliviensis]
gi|403286919|ref|XP_003934716.1| PREDICTED: high mobility group protein B1-like isoform 3 [Saimiri
boliviensis boliviensis]
gi|403286921|ref|XP_003934717.1| PREDICTED: high mobility group protein B1-like isoform 4 [Saimiri
boliviensis boliviensis]
Length = 206
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPP AFF+F E+R K E P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEYPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
>gi|194208591|ref|XP_001492381.2| PREDICTED: TOX high mobility group box family member 3 [Equus
caballus]
Length = 559
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E ++R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 190 KSATPSPSSSINEEDADESNRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 245
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 246 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 304
Query: 122 AY 123
AY
Sbjct: 305 AY 306
>gi|402875874|ref|XP_003901718.1| PREDICTED: high mobility group protein B2-like, partial [Papio
anubis]
Length = 248
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 25 GKRKAATAKLDSGSKRQ---GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVT 81
G K+ + D K +K +KDPN PKRPPSAFF+F E R K E+P ++
Sbjct: 97 GMAKSGKVRYDREMKNYVPPKGDKKGKEKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 156
Query: 82 AVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
+ K G W S +K PYE KA KLK +Y K + AY K
Sbjct: 157 -IGDTAKKLGEMWSQQSAKDKQPYEQKAAKLKEKYEKDIAAYRAK 200
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYE 106
K DPNKP+ S++ F++ R+ K+++P+ + A K +WK+MS EK+ +E
Sbjct: 37 GKGDPNKPRGKMSSYAFFVQTCREEHKEKHPDSSVGFAEFSKKCSERWKTMSAKEKSKFE 96
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 97 GMAKSGKVRYDREMKNY 113
>gi|449670744|ref|XP_002158984.2| PREDICTED: high mobility group protein 20A-like [Hydra
magnipapillata]
Length = 312
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 12/121 (9%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
+K ++ K+ KD N PK P + + +L E R+ F+ ENP++ V K G KW S+
Sbjct: 36 TKVTKQKRKRILKDVNAPKAPLTGYVRYLNEHREKFRIENPDM-PFHEVTKILGQKWSSL 94
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYN-----------KKQDGDEASDKSKSEVNDEDEA 146
+EK Y +AEK K +Y K + Y K+Q+ D +D K + + E+
Sbjct: 95 DQSEKQQYLYEAEKDKEKYMKALQGYQQSSAYKEFQKKKRQEADFLNDTGKVKCDVENSC 154
Query: 147 S 147
S
Sbjct: 155 S 155
>gi|401624308|gb|EJS42370.1| abf2p [Saccharomyces arboricola H-6]
Length = 183
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 34 LDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGK 93
L SKR R + K+ P KRP SA+F+FL++ R F KENP + + + K AG K
Sbjct: 25 LLKASKRTQLRNELIKQGP---KRPTSAYFLFLQDHRSQFVKENPTLRP-AEISKVAGEK 80
Query: 94 WKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
W+++ K Y S+ +KL SEY K Y++K
Sbjct: 81 WQTLDAGIKDKYLSQRKKLFSEYQKAKKEYDEK 113
>gi|403217833|emb|CCK72326.1| hypothetical protein KNAG_0J02470 [Kazachstania naganishii CBS
8797]
Length = 92
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR+ + KKDPN PKR SA+ F E R + ENP+VT +G+ G +WK++ +
Sbjct: 8 KRQTRRKKDPNAPKRALSAYMFFANENRDIVRSENPDVT-FGQIGRLLGERWKALDGEGR 66
Query: 103 APYESKAEKLKSEY 116
PYE+KA K Y
Sbjct: 67 EPYEAKAAADKKRY 80
>gi|345569047|gb|EGX51916.1| hypothetical protein AOL_s00043g650 [Arthrobotrys oligospora ATCC
24927]
Length = 105
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R+ + ENP + A VGK G +WK+++ A++ PYE KA+
Sbjct: 21 DPNAPKRGLSAYMFFANEQRENVRAENPGI-AFGQVGKVLGERWKALTTAQRKPYEDKAK 79
Query: 111 KLKSEY 116
K Y
Sbjct: 80 ADKQRY 85
>gi|403267260|ref|XP_003925762.1| PREDICTED: uncharacterized protein LOC101050525 [Saimiri
boliviensis boliviensis]
Length = 645
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+ PKRPPS FF+F EFR K NP ++ + V K G + ++S + K P +KA
Sbjct: 242 DPDAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKRLGERRNNLSDSGKQPSITKAA 300
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDKSK 137
KLK ++DG E K K
Sbjct: 301 KLKER---------NEEDGAEYKSKGK 318
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAP 104
+ A+ DP KPK SA+ F++ R+ KK+NP V + K +WK+MS EK+
Sbjct: 156 RMARGDPKKPKGKVSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSRKEKST 215
Query: 105 YESKAEKLKSEYGKKM 120
++ + K Y ++M
Sbjct: 216 FDEMTKVDKVRYDQEM 231
>gi|62362190|gb|AAX81532.1| amphiHMG1/2-like protein [Adineta ricciae]
Length = 142
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R KKA KDPN PKRP SAFF+F ++ R KK++P+++ V + K G +WK +S
Sbjct: 3 RAAGSSKKASKDPNAPKRPLSAFFLFSQDERPDIKKKSPSLS-VGDISKEIGSRWKKVSD 61
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
+ YE KA K +Y ++ Y K G +S
Sbjct: 62 DVRKRYEQKAADEKKKYEVRVAEYKKSGGGASSS 95
>gi|292610859|ref|XP_001921001.2| PREDICTED: TOX high mobility group box family member 4 [Danio
rerio]
Length = 685
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 47/142 (33%), Positives = 68/142 (47%), Gaps = 11/142 (7%)
Query: 19 PNDRKVGKRKA--ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKE 76
P R+VG + + A +D+G+ G ++ K KKDPN+P++P SA+ +F + + K +
Sbjct: 263 PVVRRVGGKPSMVPVATVDTGAS-LGVKKGKKKKDPNEPQKPVSAYALFFRDTQAAIKGQ 321
Query: 77 NPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKS 136
NPN T V K W S+ +K Y+ K E K +Y K + AY AS S
Sbjct: 322 NPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKDYLKALAAY-------RASQLS 373
Query: 137 KSEVNDEDEASGEEEHQLEPEP 158
KS ED A P P
Sbjct: 374 KSSSELEDSAPATPPSMPSPAP 395
>gi|326927243|ref|XP_003209802.1| PREDICTED: TOX high mobility group box family member 3-like
[Meleagris gallopavo]
Length = 573
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E ++R G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 204 KSATPSPSSSINEEDADESNRATGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 259
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 260 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 318
Query: 122 AY 123
AY
Sbjct: 319 AY 320
>gi|332017611|gb|EGI58308.1| Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
subunit A [Acromyrmex echinatior]
Length = 1249
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 25 GKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVS 84
G +++ATA + + K+ KKA +D P++P S +F+FL + R+ + +NP++T +
Sbjct: 49 GVKRSATAT--GNTPNRTKKRKKAPRDATAPRQPLSGYFLFLNDRREKVRNQNPSLT-FT 105
Query: 85 AVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY---------NKKQDGDEASDK 135
+ K +W + +K Y AE+ K Y ++ + Y N+KQ E ++
Sbjct: 106 EITKLLAAEWSKLPIDQKQRYLDAAEQDKERYNREFSDYKQTEAYRLFNEKQ--SERQNE 163
Query: 136 SKSEVNDED 144
+K E N D
Sbjct: 164 NKKERNGTD 172
>gi|395505933|ref|XP_003757291.1| PREDICTED: TOX high mobility group box family member 3-like
[Sarcophilus harrisii]
Length = 572
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E ++R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 206 KSATPSPSSSINEEDADESNRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 261
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 262 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 320
Query: 122 AY 123
AY
Sbjct: 321 AY 322
>gi|410044942|ref|XP_001169551.3| PREDICTED: high mobility group protein B1-like [Pan troglodytes]
Length = 269
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF++ E+ K E P ++ + K G W + + +K PY
Sbjct: 113 KKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLS-IGDAAKKLGEMWNNTAADDKQPY 171
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA------SDKS 136
E ++ KLK +Y K + AY K D A + KS
Sbjct: 172 EKRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKS 208
>gi|395857418|ref|XP_003801091.1| PREDICTED: high mobility group protein B1-like [Otolemur garnettii]
Length = 197
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R+G+ +KK K DPN PKRP SAFF+F E+ K E+P ++ + V K G W + +
Sbjct: 123 RKGETKKKFK-DPNAPKRPLSAFFLFCSEYCPKSKGEHPGLS-IGEVAKKLGVMWNNTAA 180
Query: 100 AEKAPYESKAEKLK 113
+K PYE KA KLK
Sbjct: 181 DDKQPYEKKAAKLK 194
>gi|148226156|ref|NP_001084164.1| FACT complex subunit SSRP1 [Xenopus laevis]
gi|82175412|sp|Q9W602.1|SSRP1_XENLA RecName: Full=FACT complex subunit SSRP1; AltName: Full=DNA
unwinding factor 87 kDa subunit; Short=DUF87; AltName:
Full=Facilitates chromatin transcription complex subunit
ssrp1; AltName: Full=Structure-specific recognition
protein 1
gi|4586285|dbj|BAA76333.1| DUF87 [Xenopus laevis]
Length = 693
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDP PKRP SA+ ++L R+ K ENP + +++ + K AG WK+MS +K
Sbjct: 531 EAKKTKDPGAPKRPMSAYMLWLNASREKIKSENPGI-SITDLSKKAGEIWKNMSRDKKEE 589
Query: 105 YESKAEKLKSEYGKKMNAYN 124
++ +AE+ K +Y K M YN
Sbjct: 590 WDRRAEEAKRDYEKAMKEYN 609
>gi|3600053|gb|AAC35540.1| contains similarity to HMG (high mobility group) box (Pfam:
HMG_box.hmm, scores: 70.67, 53.09 and 80.15)
[Arabidopsis thaliana]
Length = 401
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPK+P S++F+F ++ RK+ +E+P + S V KW + EK Y SKA
Sbjct: 323 DPNKPKKPTSSYFLFCKDARKSVLEEHPGINN-STVTAHISLKWMELGEEEKQVYNSKAA 381
Query: 111 KLKSEYGKKMNAYNK 125
+L Y K++ YNK
Sbjct: 382 ELMEAYKKEVEEYNK 396
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
DP KPK+P SA+ ++ E R K EN +V V K AG +WK++S +KAPY+ K
Sbjct: 254 DPLKPKQPISAYLIYANERRAALKGENKSVI---EVAKMAGEEWKNLSEEKKAPYDQKT 309
>gi|413938186|gb|AFW72737.1| hypothetical protein ZEAMMB73_544458 [Zea mays]
Length = 96
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Query: 66 LEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+ EFR+ ++ +P +V+ V KAAG KW++MS EK PY +A + K +Y K ++K
Sbjct: 1 MSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQKKQDYEKTKANFDK 60
Query: 126 KQDGD------EASDKSKSEVNDEDEASGEE 150
K+ E D SKSEV+DED +S EE
Sbjct: 61 KESTSSKKAKTEDEDGSKSEVDDEDGSSDEE 91
>gi|19114226|ref|NP_593314.1| High-mobility group non-histone chromatin protein (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74627097|sp|P87057.1|NHP6_SCHPO RecName: Full=Non-histone chromosomal protein 6
gi|2058376|emb|CAB08172.1| High-mobility group non-histone chromatin protein (predicted)
[Schizosaccharomyces pombe]
Length = 108
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKR SAF F E R+ K +NP+ T +G G +WK ++ E+ PYE K
Sbjct: 10 KKDPNTPKRNMSAFMFFSIENREKMKTDNPDAT-FGQLGSLLGKRWKELTSTEREPYEEK 68
Query: 109 AEKLKSEYGKKMNAYNKKQDGDEASDK 135
A + K Y ++ Y+ K E + K
Sbjct: 69 ARQDKERYERERKEYDTKLANGEKTGK 95
>gi|71662243|ref|XP_818131.1| high mobility group protein [Trypanosoma cruzi strain CL Brener]
gi|70883364|gb|EAN96280.1| high mobility group protein, putative [Trypanosoma cruzi]
Length = 270
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KD N PKR SA+F F+ +FR K++P+++ V+ KAAG WK++S K PYE+ A
Sbjct: 200 KDENAPKRSMSAYFFFVSDFR----KKHPDLS-VTETSKAAGAAWKALSDDMKKPYEAMA 254
Query: 110 EKLKSEYGKKMNA 122
+K K Y ++M A
Sbjct: 255 QKDKERYQREMAA 267
>gi|229368114|gb|ACQ59037.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 206
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E P T + V K G W + ++ P+
Sbjct: 85 KKKFKDPNAPKRPPSAFFIFCAEYRPKVKGETPGAT-IGDVAKRLGEMWNGTASEDRQPF 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K++ AY K
Sbjct: 144 EKKAAKLKEKYEKEVAAYRAK 164
>gi|221053558|ref|XP_002258153.1| high mobility group protein (HMG protein) [Plasmodium knowlesi
strain H]
gi|193807986|emb|CAQ38690.1| high mobility group protein (HMG protein),putative [Plasmodium
knowlesi strain H]
Length = 99
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAE 101
K+ K+ KKDP PKR SA+ ++++ R KE P + V+ VGK G W +S A+
Sbjct: 12 KQNKRKKKDPLAPKRALSAYMFYVKDKRLELIKEKPELARNVAQVGKLVGEAWGKLSAAQ 71
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKKQD 128
K PYE KA+ K Y K++ Y K ++
Sbjct: 72 KTPYEKKAQLDKVRYSKEIEEYRKTKN 98
>gi|148668679|gb|EDL00993.1| mCG49874 [Mus musculus]
Length = 140
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN PKRPPSAFF+F E R K ++P ++ + K G W S +K PYE KA K
Sbjct: 41 PNAPKRPPSAFFLFCSENRPEIKIDHPGLS-IGDTSKKLGVMWSEQSAKDKQPYEQKAAK 99
Query: 112 LKSEYGKKMNAY---NKKQDGDEASDK 135
K +Y K + A+ K + G + SD+
Sbjct: 100 PKEKYEKDIAAFRAKGKSEAGKKGSDR 126
>gi|79151969|gb|AAI08004.1| LOC559853 protein, partial [Danio rerio]
Length = 683
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 47/142 (33%), Positives = 68/142 (47%), Gaps = 11/142 (7%)
Query: 19 PNDRKVGKRKA--ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKE 76
P R+VG + + A +D+G+ G ++ K KKDPN+P++P SA+ +F + + K +
Sbjct: 261 PVVRRVGGKPSMVPVATVDTGASL-GVKKGKKKKDPNEPQKPVSAYALFFRDTQAAIKGQ 319
Query: 77 NPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKS 136
NPN T V K W S+ +K Y+ K E K +Y K + AY AS S
Sbjct: 320 NPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKDYLKALAAY-------RASQLS 371
Query: 137 KSEVNDEDEASGEEEHQLEPEP 158
KS ED A P P
Sbjct: 372 KSSSELEDSAPATPPSMPSPAP 393
>gi|195025405|ref|XP_001986052.1| GH21151 [Drosophila grimshawi]
gi|193902052|gb|EDW00919.1| GH21151 [Drosophila grimshawi]
Length = 744
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKD NKPKRP +AF ++L + R+ K++NP + V+ + K G WK + +K+ ++
Sbjct: 554 KKDSNKPKRPTTAFMLWLNDTREQIKRDNPGI-KVTEIAKKGGEMWKELK--DKSKWDEA 610
Query: 109 AEKLKSEYGKKMNAYN--KKQDGDEASDKSKSEVNDEDEASGEEEHQLEPEP 158
A K K Y +M Y KK + + KSK ++DED S E+ + EP
Sbjct: 611 ASKDKQRYQDEMRNYKPVKKSNTSGSGFKSKEYISDEDSTSSEDVKKSGSEP 662
>gi|258563818|ref|XP_002582654.1| nonhistone chromosomal protein 6A [Uncinocarpus reesii 1704]
gi|237908161|gb|EEP82562.1| nonhistone chromosomal protein 6A [Uncinocarpus reesii 1704]
Length = 115
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN PKR SA+ F E R+ ++ENP ++ VGK G +WK++S ++APYE KA
Sbjct: 22 PNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKLLGERWKALSDKQRAPYEEKAAA 80
Query: 112 LKSEYGKKMNAYNKKQDGDEAS 133
K Y + +YN+ + DE S
Sbjct: 81 DKKRYEDEKASYNQAPEEDEES 102
>gi|68061725|ref|XP_672863.1| high mobility group protein [Plasmodium berghei strain ANKA]
gi|68076125|ref|XP_679982.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56490279|emb|CAI01706.1| high mobility group protein, putative [Plasmodium berghei]
gi|56500842|emb|CAH99000.1| hypothetical protein PB001601.02.0 [Plasmodium berghei]
Length = 98
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKA 109
DP PKR SA+ ++++ R +E P + V+ VGK G W ++PA+KAPYE KA
Sbjct: 20 DPLAPKRALSAYMFYVKDKRLEIIQERPELAKEVAQVGKLIGEAWGQLTPAQKAPYEKKA 79
Query: 110 EKLKSEYGKKMNAYNK 125
E K Y K++ Y K
Sbjct: 80 ELDKVRYSKEIEEYRK 95
>gi|323508364|emb|CBQ68235.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 979
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 28 KAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVG 87
+AA ++++ ++ Q +R K+ ++ KPKRP SA+ +F+ R + +NP++
Sbjct: 341 RAAQRRMNAAARLQKRRLKRKEQSSGKPKRPLSAYLLFVNSVRPARQAQNPDMPLTELTA 400
Query: 88 KAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
+ A +W+ ++PA++ +E++A L+ +Y ++A+
Sbjct: 401 EMA-AEWRELAPAQRTRWEAEAALLRQQYDAALDAW 435
>gi|164661201|ref|XP_001731723.1| hypothetical protein MGL_0991 [Malassezia globosa CBS 7966]
gi|159105624|gb|EDP44509.1| hypothetical protein MGL_0991 [Malassezia globosa CBS 7966]
Length = 97
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 38/70 (54%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
G R KAKKDP PKRP SA+ F +++R K +V VG+ G KWK MS E
Sbjct: 12 GTRRTKAKKDPAAPKRPLSAYMFFSQDWRDASKPRTLTQDSVCDVGRLLGTKWKEMSDEE 71
Query: 102 KAPYESKAEK 111
K PY A K
Sbjct: 72 KKPYVEMASK 81
>gi|149726074|ref|XP_001503141.1| PREDICTED: high mobility group protein B1-like [Equus caballus]
Length = 215
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+ K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAY 123
E KA KLK +Y K + AY
Sbjct: 145 EKKAAKLKEKYEKDIAAY 162
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS E+ +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEEGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|428163656|gb|EKX32716.1| FACT complex subunit ssrp1 [Guillardia theta CCMP2712]
Length = 746
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
+ KKDPN PKRP SA+ +F + R+ KENP++ GK + WK++S EK P+E
Sbjct: 544 RQKKDPNAPKRPKSAWLLFCDAKREDIVKENPDIKFTEVNGKIS-EIWKNLSSDEKKPFE 602
Query: 107 SKAEKLKSEY 116
+A KL S+Y
Sbjct: 603 EEAAKLASKY 612
>gi|389633953|ref|XP_003714629.1| hypothetical protein MGG_01641 [Magnaporthe oryzae 70-15]
gi|351646962|gb|EHA54822.1| hypothetical protein MGG_01641 [Magnaporthe oryzae 70-15]
gi|440474541|gb|ELQ43278.1| hypothetical protein OOU_Y34scaffold00162g47 [Magnaporthe oryzae
Y34]
gi|440479757|gb|ELQ60505.1| hypothetical protein OOW_P131scaffold01287g37 [Magnaporthe oryzae
P131]
Length = 537
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
+KR+ +R KA D N P+RPPSA+ +F + R K N T ++ K G W+++
Sbjct: 108 TKRKYRRHPKA--DENAPERPPSAYVLFSNKTRDDLKDRNLTFTEIA---KLVGENWQAL 162
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAY 123
+PAEK PYE++A+ K +Y + Y
Sbjct: 163 TPAEKEPYETQAQTAKEKYNADLAEY 188
>gi|429855216|gb|ELA30184.1| hmg box protein [Colletotrichum gloeosporioides Nara gc5]
Length = 468
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K + K D N P+RPPSA+ +F + R K N T ++ K G W++++PAEK
Sbjct: 104 KYRRHPKPDENAPERPPSAYVLFSNKMRDELKGRNLTFTEIA---KLVGEHWQNLTPAEK 160
Query: 103 APYESKAEKLKSEYGKKMNAYNK 125
PYE+ A K K +Y + Y K
Sbjct: 161 EPYETSALKAKEKYNHDLAEYKK 183
>gi|345793923|ref|XP_544407.3| PREDICTED: TOX high mobility group box family member 3 [Canis lupus
familiaris]
Length = 609
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E ++R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 238 KSATPSPSSSINEEDADESNRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 293
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 294 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 352
Query: 122 AY 123
AY
Sbjct: 353 AY 354
>gi|291410693|ref|XP_002721624.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 215
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKR PSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRTPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|392563521|gb|EIW56700.1| HMG-box [Trametes versicolor FP-101664 SS1]
gi|392563525|gb|EIW56704.1| HMG-box [Trametes versicolor FP-101664 SS1]
gi|392563535|gb|EIW56714.1| HMG-box [Trametes versicolor FP-101664 SS1]
Length = 116
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 23 KVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA 82
K KR+AAT K D K +GK KDP PKR SA+ F +++R+ K ENP+
Sbjct: 7 KTTKRRAAT-KQDKAPKAKGK------KDPKAPKRALSAYMFFSQDWRERIKAENPDA-G 58
Query: 83 VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
+GK G KWK + EK PY +A KS ++ NAY+ K+
Sbjct: 59 FGEIGKLLGAKWKELDDDEKKPYLDQAAADKSRAEEEKNAYDGKK 103
>gi|384491850|gb|EIE83046.1| hypothetical protein RO3G_07751 [Rhizopus delemar RA 99-880]
Length = 101
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K+ +++KKDP+ PKR SA+ F ++ R T K+ENP + +GK G +WK++S EK
Sbjct: 21 KKARRSKKDPSAPKRGLSAYMFFSQDQRPTVKEENPKAS-FGEIGKILGERWKALSEEEK 79
Query: 103 APYESKAEKLKSEY 116
PY KAE K Y
Sbjct: 80 KPYLKKAEDDKKRY 93
>gi|426243524|ref|XP_004015604.1| PREDICTED: TOX high mobility group box family member 3 [Ovis aries]
Length = 541
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E ++R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 201 KSATPSPSSSINEEDADESNRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 256
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 257 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 315
Query: 122 AY 123
AY
Sbjct: 316 AY 317
>gi|427787117|gb|JAA59010.1| Putative dorsal switch protein 1 [Rhipicephalus pulchellus]
Length = 208
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
+++K KDPN PKRP SAFF F + R ++ENP+ ++V V K G +W + KA
Sbjct: 85 KKRKRAKDPNAPKRPLSAFFWFCNDERPNVRQENPD-SSVGEVAKELGRRWNEVGDDVKA 143
Query: 104 PYESKAEKLKSEYGKKMNAY 123
YE A K K+ Y K++ AY
Sbjct: 144 KYEGLAAKDKARYEKELKAY 163
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEK 111
+KP+ SA+ F++ R+ KK++PN V A K +WK+MS EK + A+K
Sbjct: 5 DKPRGRMSAYAFFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMSDGEKKRFHQMADK 64
Query: 112 LKSEYGKKMNAY 123
K + +M Y
Sbjct: 65 DKKRFDTEMADY 76
>gi|222619008|gb|EEE55140.1| hypothetical protein OsJ_02931 [Oryza sativa Japonica Group]
Length = 157
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 48/70 (68%)
Query: 67 EEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
E+FRKT+K+ENP+V ++ VGKA G KW +M+ E+ Y A + ++EY K + ++KK
Sbjct: 85 EDFRKTYKEENPSVKSMQEVGKACGEKWNTMTFEERVKYYDIATEKRAEYEKAVAEFDKK 144
Query: 127 QDGDEASDKS 136
++ E S++S
Sbjct: 145 KESGELSEES 154
>gi|384491642|gb|EIE82838.1| hypothetical protein RO3G_07543 [Rhizopus delemar RA 99-880]
Length = 280
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
++G R+ KR K DPN P +PPSA+ +F R K N + S + K G +W
Sbjct: 119 NNGYIRKYKRHPKP--DPNAPAKPPSAYVMFSNTARAQLKDHN---LSFSDIAKIVGDRW 173
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEASD 134
K++ EK YE A + K EY M+A+NK + E D
Sbjct: 174 KNLCAREKQLYERNAMRAKDEY---MDAFNKYKQTQEYRD 210
>gi|255552860|ref|XP_002517473.1| structure-specific recognition protein, putative [Ricinus communis]
gi|223543484|gb|EEF45015.1| structure-specific recognition protein, putative [Ricinus communis]
Length = 640
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PK+ S F F + R+ KK NP + A VGK G KWK +S EK PYE+KA
Sbjct: 552 DPNAPKKAMSGFMFFSQMERENVKKSNPGI-AFGDVGKILGDKWKKLSAEEKEPYEAKAR 610
Query: 111 KLKSEYGKKMNAYNKKQ 127
K Y ++++ Y Q
Sbjct: 611 ADKKRYKEEVSGYKNPQ 627
>gi|444728198|gb|ELW68662.1| High mobility group protein B1 [Tupaia chinensis]
Length = 132
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ V K G W + + +K PY
Sbjct: 12 KKKFKDPNAPKRPPSAFFLFCSEYRSKIKGEHPGLSN-GDVAKKLGEIWNNTAADDKQPY 70
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 71 EKKAAKLKEKYEKDIAAYRAKGKPDAA 97
>gi|388854657|emb|CCF51814.1| probable NHP6B-nonhistone chromosomal protein [Ustilago hordei]
Length = 99
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR K+KKDP PKRP SA+ F ++ R+ K +NP VG+ G +WK MS AEK
Sbjct: 16 KRTTKSKKDPAAPKRPLSAYMFFSQDQRERVKADNPEA-GFGDVGRLLGARWKEMSDAEK 74
Query: 103 APYESKAEK 111
PY A +
Sbjct: 75 KPYNDMANR 83
>gi|350585032|ref|XP_003127034.3| PREDICTED: TOX high mobility group box family member 3 [Sus scrofa]
Length = 578
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E ++R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 213 KSATPSPSSSINEEDADESNRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 268
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 269 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 327
Query: 122 AY 123
AY
Sbjct: 328 AY 329
>gi|255936601|ref|XP_002559327.1| Pc13g09020 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583947|emb|CAP91971.1| Pc13g09020 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 108
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR ++ KKDPN PKR SA+ F + R ++ENP ++ VGK G KWK++S ++
Sbjct: 16 KRVQRRKKDPNAPKRGLSAYMFFANDNRDKVREENPGIS-FGQVGKQLGDKWKALSETDR 74
Query: 103 APYESKAEKLKSEYGKKMNAY 123
PY+ KA K Y ++ AY
Sbjct: 75 KPYDDKAAADKKRYEEEKAAY 95
>gi|189442849|gb|AAI67799.1| TOX high mobility group box family member 3 [synthetic construct]
Length = 589
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 206 KSATPSPSSSINEEDADEANRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 261
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 262 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 320
Query: 122 AY 123
AY
Sbjct: 321 AY 322
>gi|297706944|ref|XP_002830283.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pongo abelii]
Length = 125
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K K PN PKRP S FF+F EF K NP ++ + V K G W +++ +EK PY
Sbjct: 20 KGGKNHPNAPKRPLSGFFLFCSEFCPKIKSTNPGIS-IGDVVKKLGEMWNNLNDSEKQPY 78
Query: 106 ESKAEKLK 113
+K KLK
Sbjct: 79 VTKVAKLK 86
>gi|146218567|gb|AAI40014.1| High-mobility group box 1 [synthetic construct]
gi|146218571|gb|AAI40019.1| High-mobility group box 1 [synthetic construct]
gi|146327050|gb|AAI41845.1| High-mobility group box 1 [Homo sapiens]
Length = 215
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K Y
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQHY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|70953373|ref|XP_745792.1| high mobility group protein [Plasmodium chabaudi chabaudi]
gi|56526224|emb|CAH87922.1| high mobility group protein, putative [Plasmodium chabaudi
chabaudi]
Length = 98
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKA 109
DP PKR SA+ ++++ R +E P + V+ VGK G W ++PA+KAPYE KA
Sbjct: 20 DPLAPKRALSAYMFYVKDKRLEIIQERPELAKEVAQVGKLIGEAWGQLTPAQKAPYEKKA 79
Query: 110 EKLKSEYGKKMNAYNK 125
E K Y K++ Y K
Sbjct: 80 ELDKVRYSKEIEEYKK 95
>gi|229594979|ref|XP_001020474.3| HMG box family protein [Tetrahymena thermophila]
gi|225566454|gb|EAS00229.3| HMG box family protein [Tetrahymena thermophila SB210]
Length = 265
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN PK+P SA+ +F + + K +NP+++ S + K G +W+ +S +K Y K E+
Sbjct: 57 PNAPKKPMSAYLIFCQTRQPEIKAKNPDLS-FSEISKVVGQEWRDLSQDKKQGYIKKEEQ 115
Query: 112 LKSEYGKKMNAYNKKQDGDEASDKS 136
LK EY K+ +NKK +G S +
Sbjct: 116 LKKEYNSKLAEFNKKNNGSTQSSST 140
>gi|303289076|ref|XP_003063826.1| histone chaperone [Micromonas pusilla CCMP1545]
gi|226454894|gb|EEH52199.1| histone chaperone [Micromonas pusilla CCMP1545]
Length = 657
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
DPN PKRP S++ +F E R +E P ++ + +GKA G KWK M+ EK PYE
Sbjct: 553 DPNAPKRPLSSYMIFAGENRGKLVEETPGMS-IGEIGKALGAKWKEMTAEEKVPYE 607
>gi|297461758|ref|XP_885168.3| PREDICTED: TOX high mobility group box family member 3 isoform 2
[Bos taurus]
gi|297485262|ref|XP_002694823.1| PREDICTED: TOX high mobility group box family member 3 [Bos taurus]
gi|296478066|tpg|DAA20181.1| TPA: TOX high mobility group box family member 3-like [Bos taurus]
Length = 556
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 206 KSATPSPSSSINEEDADETNRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 261
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 262 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 320
Query: 122 AY 123
AY
Sbjct: 321 AY 322
>gi|449269673|gb|EMC80424.1| High mobility group protein B1 [Columba livia]
Length = 209
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y K+M Y
Sbjct: 62 DMAKADKLRYEKEMKNY 78
>gi|478813|pir||S29857 nonhistone chromosomal protein HMG-1 - human
gi|184251|gb|AAA64970.1| HMG-1 [Homo sapiens]
Length = 216
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKR PSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRLPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPTGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|260806967|ref|XP_002598355.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
gi|229283627|gb|EEN54367.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
Length = 223
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 3/121 (2%)
Query: 17 LKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKE 76
L D++ +R+ A G+ +G R K+ KKDPN PKR SAFF++ + R +
Sbjct: 63 LAETDKRRYEREMAKYVPPKGA--EGGRRKRKKKDPNAPKRAMSAFFMYCADARPKVRAA 120
Query: 77 NPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKS 136
+P+ V + K G +WK +S ++KA YE KA+ K+ Y K++ Y + G + K
Sbjct: 121 HPDFQ-VGEIAKILGRQWKEISDSDKAKYEKKAQTEKARYQKELAEYKRTGGGASPAKKG 179
Query: 137 K 137
+
Sbjct: 180 R 180
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV-SAVGKAAGGKWKSMSPAEKAPYESK 108
KD NKPK SA+ F++E RK +K+ P+ V + K +WK+M+ EK ++
Sbjct: 4 KDKNKPKGKMSAYACFVQECRKEHEKKYPDKQVVFTEFSKKCAERWKTMNDGEKKRFQDL 63
Query: 109 AEKLKSEYGKKMNAY 123
AE K Y ++M Y
Sbjct: 64 AETDKRRYEREMAKY 78
>gi|154323226|ref|XP_001560927.1| hypothetical protein BC1G_00012 [Botryotinia fuckeliana B05.10]
Length = 438
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
G+KR+ +R K D + P+RPPSA+ +F + R+ K + + + K G W++
Sbjct: 118 GAKRKYRRHPKP--DESAPERPPSAYVIFSNKMREDLKGR---ALSFTEIAKLVGENWQN 172
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
+SP+EK PYE +A K Y ++ Y K Q
Sbjct: 173 LSPSEKEPYEHQAYTAKERYNNELAEYKKTQ 203
>gi|119584724|gb|EAW64320.1| hCG26831 [Homo sapiens]
Length = 212
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKR PSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRLPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPTGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|26342222|dbj|BAC34773.1| unnamed protein product [Mus musculus]
Length = 215
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKR PSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRLPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|226246533|ref|NP_001139660.1| TOX high mobility group box family member 3 isoform 2 [Homo
sapiens]
gi|194387658|dbj|BAG61242.1| unnamed protein product [Homo sapiens]
Length = 571
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 201 KSATPSPSSSINEEDADEANRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 256
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 257 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 315
Query: 122 AY 123
AY
Sbjct: 316 AY 317
>gi|71416266|ref|XP_810170.1| high mobility group protein [Trypanosoma cruzi strain CL Brener]
gi|70874664|gb|EAN88319.1| high mobility group protein, putative [Trypanosoma cruzi]
Length = 270
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KD N PKR SA+F F+ +FR K++P+++ V+ KAAG WK +S K PYE+ A
Sbjct: 200 KDENAPKRSMSAYFFFVSDFR----KKHPDLS-VTETSKAAGAAWKELSDEMKKPYEAMA 254
Query: 110 EKLKSEYGKKMNA 122
+K K Y ++M A
Sbjct: 255 QKDKERYQREMAA 267
>gi|27466905|gb|AAO12859.1| high mobility group protein [Branchiostoma belcheri tsingtauense]
Length = 164
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G R K+ KKDPN PKR SAFF++ + R + +P+ V + K G +WK +S +
Sbjct: 84 EGGRRKRKKKDPNAPKRAMSAFFMYCADARPKVRAAHPDFQ-VGDIAKILGKQWKEISDS 142
Query: 101 EKAPYESKAEKLKSEYGKKM 120
+KA YE KA+ ++ Y K++
Sbjct: 143 DKAKYEKKAQTERARYQKEL 162
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV-SAVGKAAGGKWKSMSPAEKAPYESK 108
KD NKPK SA+ F++E R+ +K+ PN V + + +WK+M+ EK ++
Sbjct: 3 KDKNKPKGKMSAYACFVQECRREHEKKYPNKQVVFTEFSQKCASRWKTMNDDEKKRFQVL 62
Query: 109 AEKLKSEYGKKMNAY 123
AE K Y + M Y
Sbjct: 63 AEADKRRYEQNMAKY 77
>gi|111154063|ref|NP_892035.2| FACT complex subunit SSRP1 [Mus musculus]
gi|209862973|ref|NP_001129553.1| FACT complex subunit SSRP1 [Mus musculus]
gi|110283006|sp|Q08943.2|SSRP1_MOUSE RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; AltName: Full=T160
gi|74138726|dbj|BAE27178.1| unnamed protein product [Mus musculus]
gi|74144584|dbj|BAE27280.1| unnamed protein product [Mus musculus]
gi|74144625|dbj|BAE27299.1| unnamed protein product [Mus musculus]
gi|74177273|dbj|BAE34555.1| unnamed protein product [Mus musculus]
Length = 708
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 27 RKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAV 86
++A AK D S+R+ KK K DPN PKRP SA+ ++L R+ K ++P + +++ +
Sbjct: 521 KRAKMAK-DRKSRRKSSEAKKGK-DPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDL 577
Query: 87 GKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
K AG WK MS +K ++ KAE + EY K M Y
Sbjct: 578 SKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|401838192|gb|EJT41931.1| ABF2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 185
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 30 ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA 89
++ L SKR R + K+ P KRP SA+F+FL++ R F KENP + S + K
Sbjct: 23 LSSILLKASKRTQLRNELIKQGP---KRPTSAYFLFLQDHRSQFAKENPTLRP-SEISKI 78
Query: 90 AGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
AG KW+++ K Y S+ ++L SEY K
Sbjct: 79 AGEKWQTLKSDIKDKYISQRKELYSEYQK 107
>gi|402908366|ref|XP_003916917.1| PREDICTED: TOX high mobility group box family member 3 [Papio
anubis]
Length = 556
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 170 KSATPSPSSSINEEDADEANRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 225
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 226 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 284
Query: 122 AY 123
AY
Sbjct: 285 AY 286
>gi|395839552|ref|XP_003792652.1| PREDICTED: TOX high mobility group box family member 3 [Otolemur
garnettii]
Length = 782
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 419 KSATPSPSSSINEEDADEASRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 474
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 475 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 533
Query: 122 AY 123
AY
Sbjct: 534 AY 535
>gi|452839855|gb|EME41794.1| hypothetical protein DOTSEDRAFT_74007 [Dothistroma septosporum
NZE10]
Length = 108
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKR SA+ F E R + +NP + VGK G KWK +S +KAPYE
Sbjct: 22 KKKKDPNMPKRGLSAYMFFANEQRDKVRDDNPGIK-FGEVGKQLGEKWKGLSEKQKAPYE 80
Query: 107 SKAEKLKSEYGKKMNAYN 124
+KA K Y ++ AY
Sbjct: 81 AKAAADKKRYEEEKAAYT 98
>gi|426382171|ref|XP_004057690.1| PREDICTED: TOX high mobility group box family member 3 [Gorilla
gorilla gorilla]
Length = 576
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 206 KSATPSPSSSINEEDADEANRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 261
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 262 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 320
Query: 122 AY 123
AY
Sbjct: 321 AY 322
>gi|183212221|gb|ACC54773.1| high-mobility group box 1 beta [Xenopus borealis]
Length = 95
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F +FR K E P T + + K G W + + +K PY
Sbjct: 34 KKKFKDPNAPKRPPSAFFLFCSDFRPKIKGEYPGST-IGDIAKKLGEMWNNTATDDKLPY 92
Query: 106 ESK 108
E K
Sbjct: 93 ERK 95
>gi|320168039|gb|EFW44938.1| hypothetical protein CAOG_02944 [Capsaspora owczarzaki ATCC 30864]
Length = 193
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
G + K KDPN PKRPPSA+ F R +K P+ T + A+ G W+ ++
Sbjct: 89 GGKSGKKSKDPNAPKRPPSAYICFANAVRPELRKTYPSDT-MPAISTKIGELWRQLTDDN 147
Query: 102 KAPYESKAEKLKSEYGKKMNAY 123
K PY +AE LK ++ +M AY
Sbjct: 148 KEPYNKQAEALKLKFQTEMAAY 169
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK +KDPNKPK+P +AF F R+ K +NP + ++ + G W + A+K Y
Sbjct: 6 KKDEKDPNKPKKPTTAFMYFSNAMRERVKTQNPGLK-MTDIASVLGKLWGQLPEADKDKY 64
Query: 106 ESKAEKLKSEYGKKMNAY 123
++ A K Y K M+ Y
Sbjct: 65 QTMANSDKERYAKAMDGY 82
>gi|365759088|gb|EHN00901.1| Abf2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 185
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 30 ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA 89
++ L SKR R + K+ P KRP SA+F+FL++ R F KENP + S + K
Sbjct: 23 LSSILLKASKRTQLRNELIKQGP---KRPTSAYFLFLQDHRSQFAKENPTLRP-SEISKI 78
Query: 90 AGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
AG KW+++ K Y S+ ++L SEY K
Sbjct: 79 AGEKWQTLKSDIKDKYISQRKELYSEYQK 107
>gi|157129203|ref|XP_001655323.1| high mobility group B1, putative [Aedes aegypti]
gi|108872320|gb|EAT36545.1| AAEL011380-PA [Aedes aegypti]
Length = 278
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
+++KA KDPN PKR SAFF F + R K NP V + K G KW M K+
Sbjct: 121 KKRKAFKDPNAPKRSLSAFFWFCHDERNKVKALNPEY-GVGDIAKELGRKWSDMDAEVKS 179
Query: 104 PYESKAEKLKSEYGKKMNAYNKK 126
YE AEK K+ Y ++M Y K
Sbjct: 180 KYEQMAEKDKARYEQEMTEYKLK 202
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEK 111
NKP+ +A+ F++ R+ KK++P + A + +WK+M EK + AEK
Sbjct: 38 NKPRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQRFHEMAEK 97
Query: 112 LKSEYGKKMNAY 123
K Y +M Y
Sbjct: 98 DKQRYELEMQNY 109
>gi|444526057|gb|ELV14266.1| High mobility group protein B1 [Tupaia chinensis]
Length = 166
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+ K E+P + + V K G W + EK PY
Sbjct: 74 KKKFKDPNTPKRPPSAFFLFCSEYSPKIKGEHPGL-PIGDVTKKLGEMWNNTGADEKQPY 132
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY + D A
Sbjct: 133 EKKAAKLKEKYEKDIAAYRARGKPDAA 159
>gi|114662470|ref|XP_001165206.1| PREDICTED: TOX high mobility group box family member 3 isoform 1
[Pan troglodytes]
Length = 577
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 206 KSATPSPSSSINEEDADEANRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 261
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 262 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 320
Query: 122 AY 123
AY
Sbjct: 321 AY 322
>gi|110766132|ref|XP_001120264.1| PREDICTED: FACT complex subunit Ssrp1 [Apis mellifera]
Length = 728
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KD NKPKRPP+AF ++L R+ K ENP + AV+ + K G W+ + +K+ +E KA
Sbjct: 544 KDTNKPKRPPTAFMMWLNSARERIKAENPGI-AVTEIAKKGGEMWRELK--DKSEWEQKA 600
Query: 110 EKLKSEYGKKMNAY 123
K K +Y M Y
Sbjct: 601 AKAKKDYSASMKEY 614
>gi|226054295|ref|NP_001073899.2| TOX high mobility group box family member 3 isoform 1 [Homo
sapiens]
gi|397498179|ref|XP_003819867.1| PREDICTED: TOX high mobility group box family member 3 [Pan
paniscus]
gi|146325793|sp|O15405.2|TOX3_HUMAN RecName: Full=TOX high mobility group box family member 3; AltName:
Full=CAG trinucleotide repeat-containing gene F9
protein; AltName: Full=Trinucleotide repeat-containing
gene 9 protein
gi|119603193|gb|EAW82787.1| hCG1639853 [Homo sapiens]
gi|208965628|dbj|BAG72828.1| TOX high mobility group box family member 3 [synthetic construct]
Length = 576
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 206 KSATPSPSSSINEEDADEANRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 261
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 262 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 320
Query: 122 AY 123
AY
Sbjct: 321 AY 322
>gi|392876622|gb|AFM87143.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ S++ F++ R+ KK++P+ + S+ K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDSSEFSKQCSERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|148669729|gb|EDL01676.1| mCG1025710 [Mus musculus]
Length = 178
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KD N PKRP SAFF+F E+R K E+P ++ + V K G W + + +K Y
Sbjct: 95 KKKFKDRNAPKRPSSAFFLFCSEYRPKIKGESPGLS-IGDVAKKLGEMWNNTAADDKQLY 153
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 154 E-KAAKLKEKYKKDIAAYRAK 173
>gi|8170740|gb|AAB19500.2| HMG1-related DNA-binding protein [Mus sp.]
Length = 708
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 27 RKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAV 86
++A AK D S+R+ KK K DPN PKRP SA+ ++L R+ K ++P + +++ +
Sbjct: 521 KRAKMAK-DRKSRRKSSEAKKGK-DPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDL 577
Query: 87 GKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
K AG WK MS +K ++ KAE + EY K M Y
Sbjct: 578 SKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|449270893|gb|EMC81539.1| High mobility group protein B2 [Columba livia]
Length = 207
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 54/114 (47%), Gaps = 13/114 (11%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R K ++P ++ + K G W S +K PYE KA
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAA 149
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDKSKSEVNDEDEASGEEEHQLEPEPEPEQDE 164
KLK +Y K + AY K D + +A EPE++E
Sbjct: 150 KLKEKYEKDIAAYRAKSKSDAGKKGPGRPAGSKKKA------------EPEEEE 191
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A + +WK+MS EK +E
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEE 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKGDKARYDREMKNY 78
>gi|1083056|pir||B61611 nonhistone chromosomal protein HMG-2 - bovine (fragments)
Length = 186
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 85 NAPKRPPSAFFLFSAEHRPKIKAEHPGLS-IGDTAKKLGEMWSQQSAKDKQPYEQKASKL 143
Query: 113 KSEY 116
K +Y
Sbjct: 144 KEKY 147
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
K DPNKP+ S++ F++ R+ KK++P+ + + +WK+MS EK+ +E
Sbjct: 2 KGDPNKPRGKMSSYAFFVQTSREEHKKKHPDASVNFSE------RWKTMSAKEKSKFEDM 55
Query: 109 AEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 56 AKSDKARYDREMKNY 70
>gi|322706965|gb|EFY98544.1| high-mobility group 20A [Metarhizium anisopliae ARSEF 23]
Length = 460
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K + K D N P+RPPSA+ +F + R+T K N T ++ K G W+S+ P EK
Sbjct: 108 KYRRHPKPDENSPERPPSAYVLFSNKMRETLKDHNLTFTEIA---KLVGENWQSLRPEEK 164
Query: 103 APYESKAEKLKSEYGKKMNAYNK 125
+ES+A K +Y +++ Y K
Sbjct: 165 DVFESQANFAKEKYNRELTEYKK 187
>gi|307192728|gb|EFN75836.1| High mobility group protein DSP1 [Harpegnathos saltator]
Length = 445
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
+++K KD N PKR SAFF F + R K NP V + K G KW P K+
Sbjct: 335 KKRKHIKDHNAPKRSLSAFFWFCNDERGKVKMLNPEY-GVGDIAKELGKKWSDADPETKS 393
Query: 104 PYESKAEKLKSEYGKKMNAYNKK-QDG 129
YE+ AEK K+ Y ++M AY KK QDG
Sbjct: 394 KYEAMAEKDKARYEREMTAYKKKMQDG 420
>gi|444720594|gb|ELW61376.1| High mobility group protein B3 [Tupaia chinensis]
Length = 124
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
+E K KKD N PKRPPS FF+F EF K N ++ + V K G W ++S ++K
Sbjct: 8 KEGKKKKDSNAPKRPPSGFFLFFSEFHPKIKSSNHGIS-IRDVAKTLGEMWNNLSDSKKQ 66
Query: 104 PYESKAEKLK 113
Y +K KLK
Sbjct: 67 SYITKPAKLK 76
>gi|1806648|gb|AAB41544.1| structure-specific recognition protein 1 [Bos taurus]
Length = 460
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +V+ + K AG WK MS +K
Sbjct: 288 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SVTDLSKKAGEIWKGMSKEKKEE 346
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 347 WDRKAEDARREYEKAMKEY 365
>gi|402591482|gb|EJW85411.1| FACT complex subunit SSRP1-A [Wuchereria bancrofti]
Length = 684
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
G R +K KKDPN PK+P SA+F++ E +FKKE +VT + + AG WK +
Sbjct: 536 GSRREKKKKDPNAPKKPQSAYFIWFGENYSSFKKEGVSVTEAA---QRAGKMWKEIDEET 592
Query: 102 KAPYESKAEKLKSEYGKKMNAY 123
K YE +A++ K Y ++M Y
Sbjct: 593 KKKYEERAKEDKERYAREMKEY 614
>gi|355757371|gb|EHH60896.1| hypothetical protein EGM_18788, partial [Macaca fascicularis]
Length = 189
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN PKRPP AFF+F E K E+P ++ VS V K G W + +K PYE KA
Sbjct: 86 KDPNAPKRPPLAFFMFSSEDCPKIK-EHPGLS-VSDVAKKLGEMWNYTAEDDKHPYEKKA 143
Query: 110 EKLKSEYGKKMNAYNKKQDGDEA 132
KLK +Y K + A+ K D A
Sbjct: 144 VKLKEKYEKDIAAFGGKGKPDAA 166
>gi|409075858|gb|EKM76234.1| hypothetical protein AGABI1DRAFT_16670, partial [Agaricus bisporus
var. burnettii JB137-S8]
gi|426193694|gb|EKV43627.1| hypothetical protein AGABI2DRAFT_56560, partial [Agaricus bisporus
var. bisporus H97]
Length = 106
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 10/83 (12%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K+KKDP PKR SA+ F +++R+ K ENP VGK G KWK M EK PY
Sbjct: 14 RKSKKDPKAPKRALSAYMFFSQDWRERIKTENPEA-GFGEVGKLLGAKWKEMDEEEKKPY 72
Query: 106 -------ESKAEKLKSEY--GKK 119
+++AEK K+ Y GKK
Sbjct: 73 VEQATADKTRAEKEKASYDSGKK 95
>gi|394337181|gb|AFN27605.1| high mobility group protein 1 [Azumapecten farreri]
Length = 215
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPKRP +A+F+FL +FRK K +N N+ + K AG +W+ ++ +K PYE +++
Sbjct: 96 DPTKPKRPQTAYFLFLGDFRK--KMKNSNIGHKDII-KQAGAEWRQLTDQDKKPYEDQSQ 152
Query: 111 KLKSEY 116
L+ +Y
Sbjct: 153 ILQKKY 158
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
DS +KR K+ KD N+PKR SA+F FL R K NV+ ++ K A +W
Sbjct: 7 DSPTKR-----KRKPKDANRPKRATSAYFFFLAHCRAEAKTTGRNVSKIADFTKEASAQW 61
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
+SM+ ++K ++ +A K K+ Y +M +
Sbjct: 62 RSMTSSDKKQFDDRAAKDKARYDAEMAVF 90
>gi|393219482|gb|EJD04969.1| HMG-box [Fomitiporia mediterranea MF3/22]
Length = 114
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKR SA+ F +++R+ K ENP+ VGK G KWK M +EK PY
Sbjct: 25 KGKKDPNAPKRALSAYMFFSQDWRERVKAENPDA-GFGEVGKLLGAKWKEMDESEKRPYI 83
Query: 107 SKAEKLKSEYGKKMNAYNKKQDG 129
+A + K+ ++ Y KK G
Sbjct: 84 EQAARDKARAEEEKANYEKKSAG 106
>gi|211929|gb|AAA48819.1| high-mobility group-2 protein [Gallus gallus]
Length = 207
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 54/114 (47%), Gaps = 13/114 (11%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R K ++P ++ + K G W S +K PYE KA
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAA 149
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDKSKSEVNDEDEASGEEEHQLEPEPEPEQDE 164
KLK +Y K + AY K D + +A EPE++E
Sbjct: 150 KLKEKYEKDIAAYRAKSKSDAGKKGPGRPAGSKKKA------------EPEEEE 191
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ + KK++P+ + A + +WK+MS EK +E
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCPREHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEE 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKGDKARYDREMKNY 78
>gi|440894115|gb|ELR46659.1| TOX high mobility group box family member 3, partial [Bos grunniens
mutus]
Length = 543
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 180 KSATPSPSSSINEEDADETNRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 235
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 236 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 294
Query: 122 AY 123
AY
Sbjct: 295 AY 296
>gi|392881066|gb|AFM89365.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|89475586|gb|ABD73318.1| high-mobility group box 1 [Oncorhynchus mykiss]
Length = 154
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRP SAFF+F +FR K E P ++ + V K G KW +++ +K PY
Sbjct: 85 KKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLS-IGDVAKKLGEKWNNLTAEDKVPY 143
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +W++MS EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|27502780|gb|AAH42502.1| Ssrp1 protein [Mus musculus]
Length = 711
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 27 RKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAV 86
++A AK D S+R+ KK K DPN PKRP SA+ ++L R+ K ++P + +++ +
Sbjct: 521 KRAKMAK-DRKSRRKSSEAKKGK-DPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDL 577
Query: 87 GKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
K AG WK MS +K ++ KAE + EY K M Y
Sbjct: 578 SKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|47497872|dbj|BAD20056.1| putative embryogenic callus protein 98b [Oryza sativa Japonica
Group]
gi|50252043|dbj|BAD27975.1| putative embryogenic callus protein 98b [Oryza sativa Japonica
Group]
gi|125581537|gb|EAZ22468.1| hypothetical protein OsJ_06136 [Oryza sativa Japonica Group]
Length = 504
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
+P SA+FV+ ++ R E NV +G+ G +WK+MS AEKAP+E+ A K + EY
Sbjct: 287 QPMSAYFVYTQQRRAALVAEKKNV---PEIGRITGEEWKAMSEAEKAPFEAAARKQREEY 343
Query: 117 GKKMNAYNKK 126
+M AY ++
Sbjct: 344 QVEMAAYRQR 353
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PK+P S+F +F +E R+ +E P V A S + KWK + AEK + KA
Sbjct: 410 DPNRPKKPASSFLLFSKEARRQLAEERPGV-ASSTLTALVSVKWKELGEAEKQAWNGKAA 468
Query: 111 KLKSEYGKKMNAYNK 125
+ + Y + M Y K
Sbjct: 469 EAMAAYKRDMEEYTK 483
>gi|189230320|ref|NP_001121484.1| TOX high mobility group box family member 3 [Xenopus (Silurana)
tropicalis]
gi|183986342|gb|AAI66269.1| LOC100158584 protein [Xenopus (Silurana) tropicalis]
Length = 580
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ V+ E + +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 208 KSATPSPSSSVNDEDVDETNRTIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 263
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W + +K Y+ K E K EY K +
Sbjct: 264 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDGLGEEQKQVYKRKTEAAKKEYLKALA 322
Query: 122 AY 123
AY
Sbjct: 323 AY 324
>gi|211520|gb|AAA48685.1| HMG box (bp. 1499..1757), partial [Gallus gallus]
Length = 669
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R+ + E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK+MS
Sbjct: 493 RKKQVESKKGKDPNVPKRPMSAYMLWLNANREKIKSDHPGI-SITDLSKKAGELWKAMSK 551
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYN 124
+K ++ KAE K +Y K M Y+
Sbjct: 552 EKKEEWDRKAEDAKRDYEKAMKEYS 576
>gi|357513707|ref|XP_003627142.1| HMG1/2-like protein [Medicago truncatula]
gi|355521164|gb|AET01618.1| HMG1/2-like protein [Medicago truncatula]
Length = 248
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
GKREK KD N KR P+ FFVF++EFRKTFK+ N + V VGK G KW+
Sbjct: 195 GKREKV--KDSNAAKRSPTDFFVFMDEFRKTFKEANLDSKDVKRVGKEDGEKWR 246
>gi|125538867|gb|EAY85262.1| hypothetical protein OsI_06634 [Oryza sativa Indica Group]
Length = 504
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
+P SA+FV+ ++ R E NV +G+ G +WK+MS AEKAP+E+ A K + EY
Sbjct: 287 QPMSAYFVYTQQRRAALVAEKKNV---PEIGRITGEEWKAMSEAEKAPFEAAARKQREEY 343
Query: 117 GKKMNAYNKK 126
+M AY ++
Sbjct: 344 QVEMAAYRQR 353
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PK+P S+F +F +E R+ +E P V A S + KWK + AEK + KA
Sbjct: 410 DPNRPKKPASSFLLFSKEARRQLAEERPGV-ASSTLTALVSVKWKELGEAEKQAWNGKAA 468
Query: 111 KLKSEYGKKMNAYNK 125
+ + Y + M Y K
Sbjct: 469 EAMAAYKRDMEEYTK 483
>gi|126333240|ref|XP_001376238.1| PREDICTED: FACT complex subunit SSRP1 [Monodelphis domestica]
Length = 712
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EGKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAYN 124
++ KAE+ K EY K M Y+
Sbjct: 596 WDRKAEEAKREYEKAMKEYS 615
>gi|392884250|gb|AFM90957.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|392878084|gb|AFM87874.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|392877754|gb|AFM87709.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|392873666|gb|AFM85665.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|387913840|gb|AFK10529.1| high mobility group protein B1-like protein [Callorhinchus milii]
gi|392873522|gb|AFM85593.1| high mobility group protein [Callorhinchus milii]
gi|392873780|gb|AFM85722.1| high mobility group protein [Callorhinchus milii]
gi|392873902|gb|AFM85783.1| high mobility group protein [Callorhinchus milii]
gi|392873908|gb|AFM85786.1| high mobility group protein [Callorhinchus milii]
gi|392873950|gb|AFM85807.1| high mobility group protein [Callorhinchus milii]
gi|392873998|gb|AFM85831.1| high mobility group protein [Callorhinchus milii]
gi|392874244|gb|AFM85954.1| high mobility group protein [Callorhinchus milii]
gi|392874940|gb|AFM86302.1| high mobility group protein [Callorhinchus milii]
gi|392876248|gb|AFM86956.1| high mobility group protein [Callorhinchus milii]
gi|392876254|gb|AFM86959.1| high mobility group protein [Callorhinchus milii]
gi|392876362|gb|AFM87013.1| high mobility group protein [Callorhinchus milii]
gi|392876946|gb|AFM87305.1| high mobility group protein [Callorhinchus milii]
gi|392877468|gb|AFM87566.1| high mobility group protein [Callorhinchus milii]
gi|392877522|gb|AFM87593.1| high mobility group protein [Callorhinchus milii]
gi|392877744|gb|AFM87704.1| high mobility group protein [Callorhinchus milii]
gi|392879776|gb|AFM88720.1| high mobility group protein [Callorhinchus milii]
gi|392880382|gb|AFM89023.1| high mobility group protein [Callorhinchus milii]
gi|392880776|gb|AFM89220.1| high mobility group protein [Callorhinchus milii]
gi|392881032|gb|AFM89348.1| high mobility group protein [Callorhinchus milii]
gi|392881292|gb|AFM89478.1| high mobility group protein [Callorhinchus milii]
gi|392881318|gb|AFM89491.1| high mobility group protein [Callorhinchus milii]
gi|392883640|gb|AFM90652.1| high mobility group protein [Callorhinchus milii]
gi|392883646|gb|AFM90655.1| high mobility group protein [Callorhinchus milii]
gi|392883680|gb|AFM90672.1| high mobility group protein [Callorhinchus milii]
gi|392883988|gb|AFM90826.1| high mobility group protein [Callorhinchus milii]
gi|392884098|gb|AFM90881.1| high mobility group protein [Callorhinchus milii]
gi|392884156|gb|AFM90910.1| high mobility group protein [Callorhinchus milii]
gi|392884178|gb|AFM90921.1| high mobility group protein [Callorhinchus milii]
gi|392884306|gb|AFM90985.1| high mobility group protein [Callorhinchus milii]
gi|392884308|gb|AFM90986.1| high mobility group protein [Callorhinchus milii]
gi|392884314|gb|AFM90989.1| high mobility group protein [Callorhinchus milii]
gi|392884420|gb|AFM91042.1| high mobility group protein [Callorhinchus milii]
gi|392884450|gb|AFM91057.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|392876202|gb|AFM86933.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQRSERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|308238179|ref|NP_001184126.1| structure specific recognition protein 1 [Xenopus (Silurana)
tropicalis]
Length = 695
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+ PKRP SA+ ++L R+ K ENP + +++ + K AG WKSMS +K ++ +AE
Sbjct: 537 DPSAPKRPMSAYMLWLNASREKIKSENPGI-SITDLSKKAGEIWKSMSKDKKEEWDRRAE 595
Query: 111 KLKSEYGKKMNAYN 124
+ K +Y K M YN
Sbjct: 596 EAKRDYEKAMKEYN 609
>gi|334311690|ref|XP_001371950.2| PREDICTED: TOX high mobility group box family member 3 [Monodelphis
domestica]
Length = 572
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 206 KSATPSPSSSINEEDADEANRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 261
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 262 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 320
Query: 122 AY 123
AY
Sbjct: 321 AY 322
>gi|395747831|ref|XP_002826470.2| PREDICTED: TOX high mobility group box family member 3 [Pongo
abelii]
Length = 554
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 170 KSATPSPSSSINEEDADEANRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 225
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 226 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 284
Query: 122 AY 123
AY
Sbjct: 285 AY 286
>gi|339521847|gb|AEJ84088.1| TOX high mobility group box family member 4 [Capra hircus]
Length = 619
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 31 TAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAA 90
T +++G K++ + +K KKDPN+P++P SA+ +F + + K +NPN T V K
Sbjct: 200 TVVVEAGKKQKAPKRRK-KKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAT-FGEVSKIV 257
Query: 91 GGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQD 128
W S+ K + K E K EY K + AY Q+
Sbjct: 258 ASMWDSLGEERKQVCKRKTEAAKKEYLKALAAYKDNQE 295
>gi|355693103|gb|EHH27706.1| hypothetical protein EGK_17974, partial [Macaca mulatta]
Length = 621
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPNKP++P SA+ +F + + K +NPN T V K W S+ +K Y+ K
Sbjct: 218 KDPNKPQKPVSAYALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKT 276
Query: 110 EKLKSEYGKKMNAYNKKQD 128
E K EY K + AY Q+
Sbjct: 277 EAAKKEYLKALAAYKDNQE 295
>gi|312281655|dbj|BAJ33693.1| unnamed protein product [Thellungiella halophila]
Length = 646
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR S F F + R KK +P + A VGK G KW+ MS EK PYE+KA+
Sbjct: 558 DPNAPKRAMSGFMFFSQMERDNIKKTHPGI-AFGEVGKVLGDKWRQMSAEEKEPYEAKAQ 616
Query: 111 KLKSEYGKKMNAYNKKQ 127
K Y +++ Y Q
Sbjct: 617 VDKKRYKDEISDYKNPQ 633
>gi|347830295|emb|CCD45992.1| similar to transcription factor HMG [Botryotinia fuckeliana]
Length = 542
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
G+KR+ +R K D + P+RPPSA+ +F + R+ K + + + K G W++
Sbjct: 100 GAKRKYRRHPKP--DESAPERPPSAYVIFSNKMREDLKGR---ALSFTEIAKLVGENWQN 154
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
+SP+EK PYE +A K Y ++ Y K Q
Sbjct: 155 LSPSEKEPYEHQAYTAKERYNNELAEYKKTQ 185
>gi|291415373|ref|XP_002723927.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G S +K PYE KA KL
Sbjct: 117 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMRSEHSAKDKQPYEQKAAKL 175
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 176 KEKYEKDIAAYRAK 189
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 27 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 86
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 87 MAKSEKARYDREMKNY 102
>gi|355710193|gb|EHH31657.1| hypothetical protein EGK_12773 [Macaca mulatta]
Length = 541
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 170 KSATPSPSSSINEEDADEANRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 225
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 226 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 284
Query: 122 AY 123
AY
Sbjct: 285 AY 286
>gi|392883584|gb|AFM90624.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCPERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|405977513|gb|EKC41956.1| High mobility group protein B3 [Crassostrea gigas]
Length = 202
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 39 KRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
K +G R++KAK DPN+PKR SA+F FL + R+ KK +T ++ K KW M+
Sbjct: 5 KAEGSRKRKAK-DPNRPKRATSAYFFFLSKMREDSKKAGKPITKIAEFTKECSAKWAKMN 63
Query: 99 PAEKAPYESKAEKLKSEYGKKMNAYNKKQDGD 130
+K P+ KA K+ Y +M Y K D
Sbjct: 64 EKDKEPFAKKALTDKNRYDAEMAIYKGKDPND 95
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 50 KDPN---KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
KDPN KPKRP SA+F FL +FR K ++ + + K AG W+++ EK P+E
Sbjct: 91 KDPNDAGKPKRPQSAYFCFLADFRLKMKGKDIDHKEII---KMAGEAWRNLDDNEKKPFE 147
Query: 107 SKAEKLKSEYGKKMNAYNKKQDGDEASDKSKSEVN 141
A+K + +Y + ++ + K G S K K E N
Sbjct: 148 KLAQKEQEKYEQALSDWRKGGGGASPSKKPKQEEN 182
>gi|380471591|emb|CCF47205.1| HMG box protein [Colletotrichum higginsianum]
Length = 513
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K + K D N P+RPPSA+ +F + R K N T ++ K G W++++P EK
Sbjct: 104 KYRRHPKPDENAPERPPSAYVLFSNKMRDDLKGRNLTFTEIA---KLVGEHWQNLTPGEK 160
Query: 103 APYESKAEKLKSEYGKKMNAYNK 125
PYES A K K +Y + Y K
Sbjct: 161 EPYESSALKAKEKYNHDLAEYKK 183
>gi|355756773|gb|EHH60381.1| hypothetical protein EGM_11729 [Macaca fascicularis]
Length = 543
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 170 KSATPSPSSSINEEDADEANRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 225
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 226 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 284
Query: 122 AY 123
AY
Sbjct: 285 AY 286
>gi|218117885|dbj|BAH03305.1| structure-specific recognition protein 1 [Gallus gallus]
Length = 706
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R+ + E K KDPN PKRP SA+ ++L R+ K ++P ++ ++ + K AG WK+MS
Sbjct: 530 RKKQVESKKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGIS-ITDLSKKAGELWKAMSK 588
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYN 124
+K ++ KAE K +Y K M Y+
Sbjct: 589 EKKEEWDRKAEDAKRDYEKAMKEYS 613
>gi|116283314|gb|AAH04848.1| Ssrp1 protein [Mus musculus]
Length = 633
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 27 RKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAV 86
++A AK D S+R+ KK K DPN PKRP SA+ ++L R+ K ++P + +++ +
Sbjct: 521 KRAKMAK-DRKSRRKSSEAKKGK-DPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDL 577
Query: 87 GKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
K AG WK MS +K ++ KAE + EY K M Y
Sbjct: 578 SKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|300677966|gb|ADK27290.1| high-mobility-group B1a [Gekko japonicus]
Length = 215
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 34 LDSGSKRQGKRE-----------KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA 82
+ G K + +RE KK KDPN PKRPPSAFF+F EFR K E+P ++
Sbjct: 63 MAKGDKVRYEREMKNYIPPKGESKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLS- 121
Query: 83 VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEA 132
+ V K G W + + +K P+E KA KLK +Y K + AY K D A
Sbjct: 122 IGDVAKKLGEMWNNTAGDDKQPFEKKAAKLKEKYEKDIAAYRAKGKPDVA 171
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 EMAKGDKVRYEREMKNY 78
>gi|334351203|sp|B7SBD2.1|TOX3_RAT RecName: Full=TOX high mobility group box family member 3; AltName:
Full=Trinucleotide repeat-containing gene 9 protein
gi|161702899|gb|ABX76291.1| TOX high mobility group box family member 3 [Rattus norvegicus]
Length = 577
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R VG+++ A DSG K + +KK KKDPN+P++P SA
Sbjct: 205 KSATPSPSSSINEEDADETNRAVGEKRTAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 260
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 261 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 319
Query: 122 AY 123
AY
Sbjct: 320 AY 321
>gi|392878832|gb|AFM88248.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 2 GKRDPRQPRGKTSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 GLAKNDKVRYDREMRNY 78
>gi|355784552|gb|EHH65403.1| hypothetical protein EGM_02155, partial [Macaca fascicularis]
Length = 116
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 31 TAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAA 90
T + D G + GK DPN PKRP S FF+F EF K NP ++ + V K
Sbjct: 11 TERKDYGPAKGGKNN-----DPNAPKRPLSGFFLFCSEFHPKMKSTNPGIS-IGDVAKKL 64
Query: 91 GGKWKSMSPAEKAPYESK 108
G W +++ +EK PY +K
Sbjct: 65 GEMWNNLNDSEKQPYITK 82
>gi|354488105|ref|XP_003506211.1| PREDICTED: FACT complex subunit SSRP1-like isoform 1 [Cricetulus
griseus]
gi|354488107|ref|XP_003506212.1| PREDICTED: FACT complex subunit SSRP1-like isoform 2 [Cricetulus
griseus]
gi|344253527|gb|EGW09631.1| FACT complex subunit SSRP1 [Cricetulus griseus]
Length = 709
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R+ E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS
Sbjct: 532 RKKSSEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSK 590
Query: 100 AEKAPYESKAEKLKSEYGKKMNAY 123
+K ++ KAE + EY K M Y
Sbjct: 591 EKKEEWDRKAEDARREYEKAMKEY 614
>gi|326920276|ref|XP_003206400.1| PREDICTED: FACT complex subunit SSRP1-like [Meleagris gallopavo]
Length = 706
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R+ + E K KDPN PKRP SA+ ++L R+ K ++P ++ ++ + K AG WK+MS
Sbjct: 530 RKKQVESKKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGIS-ITDLSKKAGELWKAMSK 588
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYN 124
+K ++ KAE K +Y K M Y+
Sbjct: 589 EKKEEWDRKAEDAKRDYEKAMKEYS 613
>gi|325181279|emb|CCA15692.1| high mobility group protein putative [Albugo laibachii Nc14]
Length = 231
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+AKKDP+ PKR SAF + + R KKENP++ + K G W + +KAPY
Sbjct: 114 KRAKKDPSAPKRASSAFLFYSQVMRPQLKKENPDLKNTD-ISKRLGEAWSKATDVQKAPY 172
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDE 131
K + +S Y ++M +N +D E
Sbjct: 173 VEKEREDRSRYKREMEEWNITKDSIE 198
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR++ KK P PKR S + +F + R+ K P V+ V +A W MS EK
Sbjct: 25 KRKRLQKKAPGAPKRGKSPYILFSMDKREEIKSHMPADAKVTDVMRAIADAWSKMSEDEK 84
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
P++S AE K Y ++M +Y+
Sbjct: 85 QPWKSAAEVDKQRYEEEMASYD 106
>gi|392883682|gb|AFM90673.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|323307721|gb|EGA60984.1| Abf2p [Saccharomyces cerevisiae FostersO]
Length = 124
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
+ L SKR R + K+ P KRP SA+F++L++ R F KENP + + + K AG
Sbjct: 23 STLLKASKRTQLRNELIKQGP---KRPTSAYFLYLQDHRSQFVKENPTLRP-AEISKIAG 78
Query: 92 GKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEAS 133
KW+++ K Y S+ +KL SEY K +++K E S
Sbjct: 79 EKWQNLEADIKEKYISERKKLYSEYQKAKKEFDEKTSSKETS 120
>gi|350402647|ref|XP_003486555.1| PREDICTED: high mobility group protein DSP1-like [Bombus impatiens]
Length = 456
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
SK +GK+ K K D N PKR SAFF F + R K NP V + K G KW
Sbjct: 342 SKGRGKKRKHIK-DHNAPKRSLSAFFWFCNDERGKVKMLNPEF-GVGDIAKELGKKWSDA 399
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
P K+ YE+ AEK K+ Y ++M AY KK
Sbjct: 400 DPETKSKYEAMAEKDKARYEREMTAYKKKM 429
>gi|57524786|ref|NP_001005796.1| FACT complex subunit SSRP1 [Gallus gallus]
gi|110283005|sp|Q04678.2|SSRP1_CHICK RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; AltName: Full=T160
gi|53128417|emb|CAG31300.1| hypothetical protein RCJMB04_4n20 [Gallus gallus]
Length = 706
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R+ + E K KDPN PKRP SA+ ++L R+ K ++P ++ ++ + K AG WK+MS
Sbjct: 530 RKKQVESKKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGIS-ITDLSKKAGELWKAMSK 588
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYN 124
+K ++ KAE K +Y K M Y+
Sbjct: 589 EKKEEWDRKAEDAKRDYEKAMKEYS 613
>gi|300122042|emb|CBK22616.2| unnamed protein product [Blastocystis hominis]
Length = 224
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+KPK+P S + + E R+ KKENP + ++ + K G KWK +S EK PY+ E
Sbjct: 22 DPDKPKKPLSGYMRYCNEQREQVKKENPEL-KLTEISKVLGEKWKELSEEEKKPYQDAYE 80
Query: 111 KLKSEYGKKMNAYNK 125
K +Y +M Y K
Sbjct: 81 ADKEKYDLQMEEYKK 95
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
DPNKPKRP S++ +F + R+ K++NP+++ + G WK +
Sbjct: 105 DPNKPKRPLSSYIIFSNDKREEVKRKNPDMSN-KEITTLLGKMWKEL 150
>gi|395544035|ref|XP_003773918.1| PREDICTED: FACT complex subunit SSRP1 [Sarcophilus harrisii]
Length = 712
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EGKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKDKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAYN 124
++ KAE+ K EY K M Y+
Sbjct: 596 WDRKAEEAKREYEKAMKEYS 615
>gi|27450225|gb|AAO14565.1|AF462604_2 HMG-L6 [Mus musculus]
Length = 199
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KD N PKRP SAFF+F E+R K E+P ++ + V K G W + + +K Y
Sbjct: 95 KKKFKDRNAPKRPSSAFFLFCSEYRPKIKGESPGLS-IGDVAKKLGEMWNNTAADDKQLY 153
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 154 E-KAAKLKEKYKKDIAAYRAK 173
>gi|407263446|ref|XP_003084790.3| PREDICTED: uncharacterized protein LOC667284 [Mus musculus]
Length = 424
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPP AFF+F E+ K E+P ++ + V K G W + + +K PY
Sbjct: 95 KKKFKDPNAPKRPPLAFFLFYSEYYPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 153
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 154 EKKAAKLKEKYEKDIAAYRAKGKPDAA 180
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKA 109
P KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E A
Sbjct: 13 HPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 72
Query: 110 EKLKSEYGKKMNAY 123
+ K+ Y +KM Y
Sbjct: 73 KADKAHYERKMKTY 86
>gi|49250826|gb|AAH74541.1| Ssrp1 protein, partial [Xenopus (Silurana) tropicalis]
Length = 629
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+ PKRP SA+ ++L R+ K ENP + +++ + K AG WKSMS +K ++ +AE
Sbjct: 537 DPSAPKRPMSAYMLWLNASREKIKSENPGI-SITDLSKKAGEIWKSMSKDKKEEWDRRAE 595
Query: 111 KLKSEYGKKMNAYN 124
+ K +Y K M YN
Sbjct: 596 EAKRDYEKAMKEYN 609
>gi|383858172|ref|XP_003704576.1| PREDICTED: high mobility group protein DSP1-like [Megachile
rotundata]
Length = 433
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
SK +GK+ K K D N PKR SAFF F + R K NP V + K G KW
Sbjct: 319 SKGRGKKRKHIK-DLNAPKRSLSAFFWFCSDERGKVKMLNPEF-GVGDIAKELGKKWSDA 376
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
P K+ YE+ AEK K+ Y ++M AY KK
Sbjct: 377 DPETKSKYEAMAEKDKARYEREMTAYKKKM 406
>gi|392883678|gb|AFM90671.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ ++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMFSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|380025638|ref|XP_003696576.1| PREDICTED: high mobility group protein DSP1-like [Apis florea]
Length = 420
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
SK +GK+ K K D N PKR SAFF F + R K NP V + K G KW
Sbjct: 306 SKGRGKKRKHIK-DHNAPKRSLSAFFWFCNDERGKVKMLNPEF-GVGDIAKELGKKWSDA 363
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
P K+ YE+ AEK K+ Y ++M AY KK
Sbjct: 364 DPETKSKYEAMAEKDKARYEREMTAYKKKM 393
>gi|345320167|ref|XP_001521836.2| PREDICTED: FACT complex subunit SSRP1-like, partial
[Ornithorhynchus anatinus]
Length = 295
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 39 KRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
+RQ K KDPN PKRP SA+ ++L R+ K ++P ++ ++ + K AG WK M+
Sbjct: 111 QRQMFFVGKKGKDPNAPKRPMSAYMLWLNASREKIKADHPGIS-ITDLSKKAGEIWKGMT 169
Query: 99 PAEKAPYESKAEKLKSEYGKKMNAYNKKQDGD 130
+K ++ KAE+ K EY K M Y++ GD
Sbjct: 170 KEKKEEWDRKAEEAKREYEKAMKEYSEGGRGD 201
>gi|154323224|ref|XP_001560926.1| hypothetical protein BC1G_00011 [Botryotinia fuckeliana B05.10]
Length = 263
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
G+KR+ +R K D + P+RPPSA+ +F + R+ K + + + K G W++
Sbjct: 111 GAKRKYRRHPKP--DESAPERPPSAYVIFSNKMREDLKGR---ALSFTEIAKLVGENWQN 165
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
+SP+EK PYE +A K Y ++ Y K Q
Sbjct: 166 LSPSEKEPYEHQAYTAKERYNNELAEYKKTQ 196
>gi|444706303|gb|ELW47646.1| Glycine/arginine-rich protein 1 [Tupaia chinensis]
Length = 485
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN PKRPPSAFF+F E+R KE+P ++ + + K G W S + A+ KA
Sbjct: 35 KDPNAPKRPPSAFFLFCSEYRPKI-KEHPGLS-IGDIAKKLGELWTSTA-ADGTQPRKKA 91
Query: 110 EKLKSEYGKKMNAY 123
KL+ ++GK + AY
Sbjct: 92 AKLEEKHGKAIAAY 105
>gi|348556930|ref|XP_003464273.1| PREDICTED: FACT complex subunit SSRP1-like [Cavia porcellus]
Length = 709
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R+ E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS
Sbjct: 532 RKKTVEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSK 590
Query: 100 AEKAPYESKAEKLKSEYGKKMNAY 123
+K ++ KAE + EY K M Y
Sbjct: 591 EKKEEWDRKAEDARREYEKAMKEY 614
>gi|432113411|gb|ELK35821.1| FACT complex subunit SSRP1 [Myotis davidii]
Length = 709
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK+MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKAMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|145356938|ref|XP_001422680.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582923|gb|ABP00997.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 622
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
+AKKDPN PKR SA+ F R NP+ V+ V KA G KWK+++ EK+ Y+
Sbjct: 515 RAKKDPNAPKRGLSAYMFFSAAKRAEITAANPSF-GVTDVAKALGEKWKTITDEEKSVYQ 573
Query: 107 SKAEKLKSEYGKKMNAY 123
+A++ K Y ++M AY
Sbjct: 574 QQADEDKIRYEREMEAY 590
>gi|444727982|gb|ELW68448.1| High mobility group protein B1 [Tupaia chinensis]
Length = 165
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAF +F E+R K E+P ++ + V K G W + + +K PYE KA
Sbjct: 79 DPNAPKRPPSAFSLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPYEKKAA 137
Query: 111 KL 112
KL
Sbjct: 138 KL 139
>gi|109469081|ref|XP_001074673.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|293346414|ref|XP_002726304.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392346830|ref|XP_003749644.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 213
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSA F+F E+R K E+P ++ + V K G W + + +K P
Sbjct: 86 KKKFKDPNAPKRPPSA-FLFCSEYRPKIKGEHPALS-IGDVTKKLGEVWTNTASDDKQPC 143
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E A KLK +Y K AY K D A
Sbjct: 144 EKMAAKLKEKYEKDTAAYRAKGKPDAA 170
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKAMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|310790717|gb|EFQ26250.1| HMG box protein [Glomerella graminicola M1.001]
Length = 500
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K + K D N P+RPPSA+ +F + R K N T ++ K G W++++P EK
Sbjct: 104 KYRRHPKPDENAPERPPSAYVLFSNKMRDDLKGRNLTFTEIA---KLVGEHWQNLTPGEK 160
Query: 103 APYESKAEKLKSEYGKKMNAYNK 125
PYE+ A K K +Y + Y K
Sbjct: 161 EPYETSALKAKEKYNHDLAEYKK 183
>gi|146163497|ref|XP_001011529.2| HMG box family protein [Tetrahymena thermophila]
gi|146146042|gb|EAR91284.2| HMG box family protein [Tetrahymena thermophila SB210]
Length = 2400
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 33 KLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGG 92
K +G+K G + KDP+ PK+P +A+ ++ + ++ F ++ PN ++ + K
Sbjct: 2187 KKKTGNK-SGVPKNSEIKDPDMPKKPSTAYILYFKNRKEKFLQQYPNF-GITEITKLIAK 2244
Query: 93 KWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQDGDEASDKSKSEVN 141
+W +S ++ P+ AEK K +Y ++M Y K G + + + N
Sbjct: 2245 EWSELSREKQIPFLRDAEKAKLDYIERMKEYASKHPGIKVPGEGRRRKN 2293
>gi|74638955|sp|Q9UVL1.1|NHP6_CANAL RecName: Full=Non-histone chromosomal protein 6
gi|6273391|gb|AAF06350.1|AF196333_1 nonhistone protein 6 [Candida albicans]
gi|238881668|gb|EEQ45306.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 92
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+ PKR SA+ F E R + ENP ++ VGK G KWK+++ +K PYE+KAE
Sbjct: 15 DPDAPKRSLSAYMFFANENRDIVRAENPGIS-FGQVGKLLGEKWKALNSEDKLPYENKAE 73
Query: 111 KLKSEYGKKMNAYNKKQ 127
K Y K+ Y KK
Sbjct: 74 ADKKRYEKEKAEYAKKN 90
>gi|403292578|ref|XP_003937316.1| PREDICTED: TOX high mobility group box family member 3 [Saimiri
boliviensis boliviensis]
Length = 551
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 170 KSATPSPSSSINEEDADEASRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 225
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 226 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 284
Query: 122 AY 123
AY
Sbjct: 285 AY 286
>gi|356513291|ref|XP_003525347.1| PREDICTED: high mobility group B protein 13-like [Glycine max]
Length = 473
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPK P SA+F+F + R EN N V K +WK+M+ +K PYE A+
Sbjct: 261 DPLKPKHPMSAYFLFTNDRRAALVAENKNFLEVP---KITAEEWKNMTEEQKRPYEEMAK 317
Query: 111 KLKSEYGKKMNAYNKKQDGDEA 132
K K +Y +M Y +K+D + A
Sbjct: 318 KNKEKYALEMEVYKQKKDEEAA 339
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PK+P S+F +F +E +KT +E P + S + KWK +S ++ + +A
Sbjct: 387 DPNRPKKPASSFILFSKEAKKTLHEERPGINT-STLNALVSLKWKELSVEDRQFWNGQAS 445
Query: 111 KLKSEYGKKMNAYNK 125
K Y K++ YNK
Sbjct: 446 KAMDAYKKELEEYNK 460
>gi|348680492|gb|EGZ20308.1| hypothetical protein PHYSODRAFT_285400 [Phytophthora sojae]
Length = 211
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 11/126 (8%)
Query: 6 GKGAARVSQEALKPNDRKVG--KRKAATAKLD-----SGSKRQGKREKKAKKDPNKPKRP 58
G+ ++S E +P D KR+ K D S +G R+ KKDPN PKR
Sbjct: 60 GRRWKKISDEERRPYDELAAADKRRYQEEKEDYVPDPSFETTKGSRK---KKDPNAPKRA 116
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+F F + R+ + ENPN ++ + +W+++ ++A Y+ E+ K +Y +
Sbjct: 117 LSAYFFFCNDIRQEVRDENPN-KKITEIATLLAERWRALPDKKRAKYQKMHEEAKVKYQQ 175
Query: 119 KMNAYN 124
+M+AYN
Sbjct: 176 QMDAYN 181
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R+ + KKD N PKR SAF F + R+T KKE P + A + G +WK +S E+
Sbjct: 14 RKPRKKKDKNAPKRALSAFMFFSNDIRETVKKEMPEL-AFLQISSEIGRRWKKISDEERR 72
Query: 104 PYESKAEKLKSEY 116
PY+ A K Y
Sbjct: 73 PYDELAAADKRRY 85
>gi|260803411|ref|XP_002596583.1| hypothetical protein BRAFLDRAFT_154496 [Branchiostoma floridae]
gi|229281842|gb|EEN52595.1| hypothetical protein BRAFLDRAFT_154496 [Branchiostoma floridae]
Length = 710
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PK+ +AF ++L R +KENP+ ++ +GK AG KW+ M P++K +E KA+
Sbjct: 543 DPNAPKKAMTAFMLWLNATRSELRKENPD-ASIGEIGKIAGEKWREMGPSDKEEWEQKAK 601
Query: 111 KLKSEYGKKMNAYNKKQ 127
+ K Y M Y ++
Sbjct: 602 EDKERYKAAMEEYQARK 618
>gi|291414887|ref|XP_002723687.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 209
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMRSEHSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|443710428|gb|ELU04681.1| hypothetical protein CAPTEDRAFT_155070 [Capitella teleta]
Length = 269
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R++K D N PK+P + + FL + R+ ++ENP+ T + + K G +W + P EK
Sbjct: 15 RKRKRVHDANAPKQPLTGYVRFLSDRREQIREENPSAT-FTEITKRLGAEWSKLPPMEKQ 73
Query: 104 PYESKAEKLKSEYGKKMNAYNK 125
Y +AE+ K Y K++ AY++
Sbjct: 74 RYLDEAERDKERYLKELEAYHQ 95
>gi|297303892|ref|XP_002806292.1| PREDICTED: high mobility group-T protein-like [Macaca mulatta]
Length = 159
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN PKRPP AFF+F E K E+P ++ VS V K G W + +K PYE KA
Sbjct: 55 KDPNAPKRPPLAFFMFSSEDCPKIK-EHPGLS-VSDVAKKLGEMWNYTAEDDKHPYEKKA 112
Query: 110 EKLKSEYGKKMNAYNKKQDGDEA 132
KLK +Y K + A+ K D A
Sbjct: 113 VKLKEKYEKDIAAFGGKGKPDAA 135
>gi|392881260|gb|AFM89462.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVTKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 2 GKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 DLAKNDKVRYDREMRNY 78
>gi|241954210|ref|XP_002419826.1| high-mobility group non-histone chromosomal protein, putative
[Candida dubliniensis CD36]
gi|223643167|emb|CAX42041.1| high-mobility group non-histone chromosomal protein, putative
[Candida dubliniensis CD36]
Length = 92
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+ PKR SA+ F E R + ENP ++ VGK G KWK+++ +K PYE+KAE
Sbjct: 15 DPDAPKRSLSAYMFFANENRDIVRAENPGIS-FGQVGKLLGEKWKALNSEDKLPYENKAE 73
Query: 111 KLKSEYGKKMNAYNKKQ 127
K Y K+ Y KK
Sbjct: 74 ADKKRYEKEKAEYAKKN 90
>gi|296224352|ref|XP_002758030.1| PREDICTED: high mobility group protein B1-like isoform 1
[Callithrix jacchus]
gi|390474708|ref|XP_003734829.1| PREDICTED: high mobility group protein B1-like isoform 2
[Callithrix jacchus]
Length = 215
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKR PS FF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRTPSVFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|968888|dbj|BAA09924.1| HMG-1 [Homo sapiens]
Length = 215
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KAEKLK +Y K + AY K D A
Sbjct: 145 EKKAEKLKEKYEKDIAAYRAKGKPDAA 171
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+R S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRRKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|443724197|gb|ELU12309.1| hypothetical protein CAPTEDRAFT_56147, partial [Capitella teleta]
Length = 196
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 24 VGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
+G+ K AT K G KR K KDPN+PKRP SA+F ++ R +K +T V
Sbjct: 1 LGRPKGATTK---GGKR------KKNKDPNRPKRPTSAYFFYVAHCRAECEKRGERITRV 51
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
+ K W+ M+P ++ +++KA K+ Y ++MN Y
Sbjct: 52 AQWTKEISQVWREMTPEDRKGFDAKAVVDKARYEEQMNRY 91
>gi|335281869|ref|XP_003353912.1| PREDICTED: FACT complex subunit SSRP1 [Sus scrofa]
Length = 709
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|407850184|gb|EKG04681.1| high mobility group protein, putative [Trypanosoma cruzi]
Length = 270
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KD N PKR SA+F F+ +FRK ++P+++ V+ KAAG WK +S K PYE+ A
Sbjct: 200 KDENAPKRSMSAYFFFVGDFRK----KHPDLS-VTETSKAAGAAWKELSDEMKKPYEAMA 254
Query: 110 EKLKSEYGKKMNA 122
+K K Y ++M A
Sbjct: 255 QKDKERYQREMAA 267
>gi|412985385|emb|CCO18831.1| CG4797 [Bathycoccus prasinos]
Length = 669
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK +KDPN PKRP S + +F E R K+ENP+ + ++ V K G +WKS++ EK Y
Sbjct: 571 KKKEKDPNAPKRPLSTYMIFSAEMRAKVKEENPDFS-ITDVAKELGVRWKSVTDEEKVKY 629
Query: 106 ESKAEK 111
E A+K
Sbjct: 630 EELAKK 635
>gi|196119855|gb|ACG69451.1| high-mobility group box 1 (predicted) [Otolemur garnettii]
Length = 155
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKR PSAFF+F E+R K E+P ++ + V K G W + + +K P
Sbjct: 35 KKKFKDPNAPKRLPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPE 93
Query: 106 ESKAEKL 112
E KA KL
Sbjct: 94 EKKAAKL 100
>gi|452988900|gb|EME88655.1| hypothetical protein MYCFIDRAFT_57980 [Pseudocercospora fijiensis
CIRAD86]
Length = 108
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN PKR SA+ F E R + ENP + VGK G KWK++ +KAPYE+KA
Sbjct: 27 PNMPKRGLSAYMFFANEQRDKVRDENPGIK-FGEVGKMLGEKWKALGEKQKAPYEAKAAA 85
Query: 112 LKSEYGKKMNAYNKKQDGDE 131
K Y ++ AY D DE
Sbjct: 86 DKKRYEEEKAAYTAGGDDDE 105
>gi|449472784|ref|XP_002193745.2| PREDICTED: TOX high mobility group box family member 3 [Taeniopygia
guttata]
Length = 574
Score = 55.5 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E ++R G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 205 KSATPSPSSSINEEDADESNRATGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 260
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 261 YALFFRDTQAAIKGQNPNAT-FGDVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 319
Query: 122 AY 123
AY
Sbjct: 320 AY 321
>gi|356523473|ref|XP_003530363.1| PREDICTED: high mobility group B protein 13-like isoform 2 [Glycine
max]
Length = 467
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
P KPK P SA+F+F + R EN N V K +WK+M+ +K PYE A+K
Sbjct: 264 PLKPKHPMSAYFLFTNDRRAALAAENKNFLEVP---KITSEEWKNMTEEQKRPYEEMAKK 320
Query: 112 LKSEYGKKMNAYNKKQDGDEA 132
K +Y +M AY +K+D + A
Sbjct: 321 NKEQYALEMEAYKQKKDEEAA 341
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PK+P S+F +F +E RKT ++E P ++ S + KWK +S ++ + +A
Sbjct: 381 DPNRPKKPASSFILFSKEARKTLQEERPGIS-TSTLNALVSLKWKELSEEDRQFWNGQAS 439
Query: 111 KLKSEYGKKMNAYNK 125
K Y K++ YNK
Sbjct: 440 KAMDAYKKELEEYNK 454
>gi|296231075|ref|XP_002760991.1| PREDICTED: TOX high mobility group box family member 3 [Callithrix
jacchus]
Length = 552
Score = 55.5 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 170 KSATPSPSSSINEEDADEASRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 225
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 226 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 284
Query: 122 AY 123
AY
Sbjct: 285 AY 286
>gi|51339|emb|CAA47900.1| high mobility group 2 protein [Mus musculus]
Length = 205
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAF +F E R K E P ++ + K G W S EK PYE KA KL
Sbjct: 93 NAPKRPPSAFCLFCSENRPKIKIEYPGLS-IGDTAKKLGEMWSEQSAKEKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K AY K
Sbjct: 152 KEKYEKDFAAYRVK 165
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DP KP S++ F++ R+ KK++PN + A + K +WK+MS E + +E
Sbjct: 3 KGDPIKPLGKMSSYAFFVQTCREEHKKKHPNSSVNFAEISKKCSKRWKTMSAKENSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 LAKSDKACYYREMKNY 78
>gi|392876906|gb|AFM87285.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCFDHRLRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|412992276|emb|CCO19989.1| nucleosome binding protein [Bathycoccus prasinos]
Length = 94
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+F F+ + R K NP++ V+ VGK G W++MS +EK PY KA+
Sbjct: 20 DPNAPKRNLSAYFFFMNDQRAKVVKANPDMK-VTEVGKKLGELWRAMSDSEKVPYNKKAD 78
Query: 111 KLKSEYGKKMNAY 123
K Y K AY
Sbjct: 79 ADKVRYEKAKAAY 91
>gi|255073265|ref|XP_002500307.1| set domain protein [Micromonas sp. RCC299]
gi|226515569|gb|ACO61565.1| set domain protein [Micromonas sp. RCC299]
Length = 1496
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 56 KRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKS 114
KRP +AFF+F +E R ++ P + T +SAVGK G +W+ +S EK PY KAE+ +
Sbjct: 674 KRPMTAFFIFSQEQRALLIEQRPELRTNISAVGKLMGERWRKLSDEEKFPYAIKAEEARH 733
Query: 115 EY 116
EY
Sbjct: 734 EY 735
>gi|296479522|tpg|DAA21637.1| TPA: structure specific recognition protein 1 [Bos taurus]
Length = 709
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +V+ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SVTDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|155371817|ref|NP_001094511.1| FACT complex subunit SSRP1 [Bos taurus]
gi|151554654|gb|AAI49986.1| SSRP1 protein [Bos taurus]
gi|440894802|gb|ELR47155.1| FACT complex subunit SSRP1 [Bos grunniens mutus]
Length = 709
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +V+ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SVTDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|20138433|sp|Q9UGV6.1|HMGLX_HUMAN RecName: Full=Putative high mobility group protein 1-like 10;
Short=HMG-1L10
Length = 211
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKR PSAFF+F +R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRTPSAFFLFCSAYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAA 171
>gi|356523471|ref|XP_003530362.1| PREDICTED: high mobility group B protein 13-like isoform 1 [Glycine
max]
Length = 478
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
P KPK P SA+F+F + R EN N V K +WK+M+ +K PYE A+K
Sbjct: 264 PLKPKHPMSAYFLFTNDRRAALAAENKNFLEVP---KITSEEWKNMTEEQKRPYEEMAKK 320
Query: 112 LKSEYGKKMNAYNKKQDGDEA 132
K +Y +M AY +K+D + A
Sbjct: 321 NKEQYALEMEAYKQKKDEEAA 341
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PK+P S+F +F +E RKT ++E P ++ S + KWK +S ++ + +A
Sbjct: 392 DPNRPKKPASSFILFSKEARKTLQEERPGIS-TSTLNALVSLKWKELSEEDRQFWNGQAS 450
Query: 111 KLKSEYGKKMNAYNK 125
K Y K++ YNK
Sbjct: 451 KAMDAYKKELEEYNK 465
>gi|302414302|ref|XP_003004983.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261356052|gb|EEY18480.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 220
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
+KR+ +R K D N P+RPPSA+ +F + R K N T ++ K G W+S+
Sbjct: 101 TKRKYRRHPKP--DENAPERPPSAYVLFSNKMRDDLKGRNLTFTEIA---KLVGENWQSL 155
Query: 98 SPAEKAPYESKAEKLKSEYGKKM 120
SP EK P+E++A K +Y + +
Sbjct: 156 SPVEKEPFETQALNAKEKYNQDL 178
>gi|444708344|gb|ELW49421.1| High mobility group protein B1 [Tupaia chinensis]
Length = 302
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F ++R KE+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSDYRPKI-KEHPGLS-IGDVAKKLGEMWNNTATDDKQPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 144 EKKAAKLKEKYEKDIAAYQAKGKPDAA 170
Score = 35.4 bits (80), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ ++ KKE+P V+ S K +WK MS +K +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCQEEHKKEHPGVSVNFSEFSKKCSERWKIMSAKKKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y +++ Y
Sbjct: 63 TAKADKVHYEREIKTY 78
>gi|62087576|dbj|BAD92235.1| high-mobility group box 1 variant [Homo sapiens]
Length = 176
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 88 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 146
Query: 106 ESKAEKLKSEY 116
E KA KLK +Y
Sbjct: 147 EKKAAKLKEKY 157
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 4 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 63
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 64 DMAKADKARYEREMKTY 80
>gi|296317265|ref|NP_001171733.1| dorsal switch-like hmg protein [Saccoglossus kowalevskii]
Length = 215
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+ PKR S FF+F R KK +PN V V KA G +WK++S A+KA YE +A
Sbjct: 95 DPDAPKRNLSPFFLFCNVKRAEVKKVHPN-WGVGDVAKALGEQWKNVSAADKAKYEKEAA 153
Query: 111 KLKSEYGKKMNAY 123
K K Y K M AY
Sbjct: 154 KEKIRYEKDMEAY 166
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K +P+KPK SA+ F++ R+ KK++P + V A K +WK M+ EK +
Sbjct: 4 KGNPDKPKGRMSAYAFFVQSCRQEHKKQHPAESVVFAEFSKKCAERWKKMTDKEKKVFHD 63
Query: 108 KAEKLKSEYGKKMNAYN 124
A+K K Y +M Y
Sbjct: 64 MADKDKERYNTEMEKYT 80
>gi|170056683|ref|XP_001864141.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876428|gb|EDS39811.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 372
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
+++KA KDPN PKR SAFF F E R K NP V + K G KW M K+
Sbjct: 221 KKRKAFKDPNAPKRSLSAFFWFCHEERNKVKALNPEY-GVGDIAKELGRKWSDMDAEVKS 279
Query: 104 PYESKAEKLKSEYGKKMNAYNKK 126
YE AEK K+ Y +M Y K
Sbjct: 280 RYEQMAEKDKARYEAEMTEYKLK 302
>gi|91088019|ref|XP_974107.1| PREDICTED: similar to GA18041-PA [Tribolium castaneum]
gi|270012067|gb|EFA08515.1| hypothetical protein TcasGA2_TC006168 [Tribolium castaneum]
Length = 240
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
SG R+ + K K PNKPK+P + +F F+++ R K+NPN+ V + A WK
Sbjct: 27 SGVSRKAADKLKELKIPNKPKKPLTPYFKFIQDHRPALLKQNPNLKVTQVVSQLAAD-WK 85
Query: 96 SMSPAEKAPYES 107
++ P+ KA YE+
Sbjct: 86 TVDPSLKAKYEN 97
>gi|426245460|ref|XP_004023562.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1 [Ovis
aries]
Length = 703
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +V+ + K AG WK MS +K
Sbjct: 531 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SVTDLSKKAGEIWKGMSKEKKEE 589
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE+ + EY K M Y
Sbjct: 590 WDRKAEEARREYEKAMKEY 608
>gi|7544638|gb|AAA73079.2| unknown [Saccharomyces cerevisiae]
Length = 183
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
+ L SKR R + K+ P KRP SA+F++L++ R F KENP + + + K AG
Sbjct: 23 STLLKASKRTQTRNELMKQGP---KRPTSAYFLYLQDHRSQFVKENPTLRP-AEISKIAG 78
Query: 92 GKWKSMSPAEKAPYESKAEKLKSEYGK 118
KW+++ K Y S+ +KL SEY K
Sbjct: 79 EKWQNLEADMKEKYISERKKLYSEYQK 105
>gi|409050062|gb|EKM59539.1| hypothetical protein PHACADRAFT_250106 [Phanerochaete carnosa
HHB-10118-sp]
Length = 256
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 41 QGKREKKAK-KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
+GKR++K K KDPN PKRPPS++ +F E R+ K ++PN+ + K A W M
Sbjct: 84 EGKRKRKTKPKDPNAPKRPPSSYLLFQNEVRQELKAKHPNIPNNELLAKIAKA-WGDMPK 142
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYNKKQDG 129
+K YES+ K+ Y ++ Y + G
Sbjct: 143 EQKDRYESRHAVSKNHYLEQKKEYERTLTG 172
>gi|395856570|ref|XP_003800699.1| PREDICTED: high mobility group protein B1-like [Otolemur garnettii]
Length = 161
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKR PSAFF+F E+R K E+P ++ + V K G W + + +K P
Sbjct: 35 KKKFKDPNAPKRLPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPE 93
Query: 106 ESKAEKL 112
E KA KL
Sbjct: 94 EKKAAKL 100
>gi|221045048|dbj|BAH14201.1| unnamed protein product [Homo sapiens]
Length = 174
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEY 116
E KA KLK +Y
Sbjct: 145 EKKAAKLKEKY 155
Score = 38.9 bits (89), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|440900657|gb|ELR51738.1| High mobility group protein B1 [Bos grunniens mutus]
Length = 224
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|157820243|ref|NP_001099641.1| TOX high mobility group box family member 3 [Rattus norvegicus]
gi|149032667|gb|EDL87537.1| trinucleotide repeat containing 9 (predicted) [Rattus norvegicus]
Length = 543
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R VG+++ A DSG K + +KK KKDPN+P++P SA
Sbjct: 169 KSATPSPSSSINEEDADETNRAVGEKRTAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 224
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 225 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 283
Query: 122 AY 123
AY
Sbjct: 284 AY 285
>gi|440804471|gb|ELR25348.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 205
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+ KKDPN PK+P SAFF F ++ R K ENP+ + +GK G +W + E+ +
Sbjct: 96 KRKKKDPNAPKKPCSAFFHFSKKMRPRIKDENPDAS-FGQLGKIIGEQWSKLGADERKEF 154
Query: 106 ESKAEKLKSEYGKKMNAYNKKQ 127
E+ A K Y K+M Y K+
Sbjct: 155 ETLAAADKERYAKEMKDYQAKK 176
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
++ +KDPN PKR +A+ +F +E R K ++P V VGK G W ++ +K Y
Sbjct: 3 RRKRKDPNAPKRAMTAYMLFSQEKRTQIKTDHPTV-GFGQVGKLLGEAWAALPDGDKRKY 61
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEASD 134
A K K Y K+ Y K+D E+SD
Sbjct: 62 NELAAKDKIRYQKEAAQY--KEDHPESSD 88
>gi|281350894|gb|EFB26478.1| hypothetical protein PANDA_002732 [Ailuropoda melanoleuca]
Length = 157
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEY 116
E KA KLK +Y
Sbjct: 145 EKKAAKLKEKY 155
>gi|444705434|gb|ELW46861.1| FACT complex subunit SSRP1 [Tupaia chinensis]
Length = 704
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 532 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 590
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 591 WDRKAEDARREYEKAMKEY 609
>gi|440799045|gb|ELR20106.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 143
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
++GK+EK DPN PKR +A+ +F E R K +NP + + K KWK++S
Sbjct: 42 KKGKKEK----DPNAPKRAKTAYIIFATEERPRAKADNPEL-GFGDLTKCVSDKWKALSD 96
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYNKKQDGD 130
EKAPY KA + K Y +++ YNK + D
Sbjct: 97 DEKAPYLEKAAQDKERYADEVSKYNKSKSDD 127
>gi|344253440|gb|EGW09544.1| High mobility group protein B1 [Cricetulus griseus]
Length = 169
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KD N PKRPPSAFF+F E+ K E+P ++ + V K G KW + + +K PY
Sbjct: 85 KKKFKDSNAPKRPPSAFFLFCSEYCPKIKGEHPGLS-LGDVAKKLGEKWNNTAAGDKQPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKAAKLKEKYEKDIVAYRAK 164
>gi|283462216|gb|ADB22402.1| dorsal switch-like hmg protein [Saccoglossus kowalevskii]
Length = 241
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+ PKR S FF+F R KK +PN V V KA G +WK++S A+KA YE +A
Sbjct: 121 DPDAPKRNLSPFFLFCNVKRAEVKKVHPN-WGVGDVAKALGEQWKNVSAADKAKYEKEAA 179
Query: 111 KLKSEYGKKMNAY 123
K K Y K M AY
Sbjct: 180 KEKIRYEKDMEAY 192
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K +P+KPK SA+ F++ R+ KK++P + V A K +WK M+ EK +
Sbjct: 30 KGNPDKPKGRMSAYAFFVQSCRQEHKKQHPAESVVFAEFSKKCAERWKKMTDKEKKVFHD 89
Query: 108 KAEKLKSEYGKKMNAYN 124
A+K K Y +M Y
Sbjct: 90 MADKDKERYNTEMEKYT 106
>gi|171696076|ref|XP_001912962.1| hypothetical protein [Podospora anserina S mat+]
gi|170948280|emb|CAP60444.1| unnamed protein product [Podospora anserina S mat+]
Length = 478
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K + K D N P+RPPSA+ +F + R+ K N + T ++ K G W+S++ +EK
Sbjct: 107 KYRRHPKPDENAPERPPSAYVLFSNKMREELKGRNLSFTEIA---KLVGENWQSLNASEK 163
Query: 103 APYESKAEKLKSEYGKKMNAYNK 125
PYES+A+ +K +Y + Y K
Sbjct: 164 EPYESQAQAIKEKYLSDLAEYKK 186
>gi|392351997|ref|XP_003751090.1| PREDICTED: high mobility group protein B2-like, partial [Rattus
norvegicus]
Length = 154
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 K 113
K
Sbjct: 152 K 152
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + A K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|354471653|ref|XP_003498055.1| PREDICTED: TOX high mobility group box family member 3-like
[Cricetulus griseus]
Length = 544
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++ A DSG K + +KK KKDPN+P++P SA
Sbjct: 170 KSATPSPSSSINEEDTDEANRAIGEKRTAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 225
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 226 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 284
Query: 122 AY 123
AY
Sbjct: 285 AY 286
>gi|407404609|gb|EKF29994.1| high mobility group protein, putative [Trypanosoma cruzi
marinkellei]
Length = 361
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KD N PKR SA+F F +FRK ++P+++ V+ KAAG WK +S K PYE+ A
Sbjct: 291 KDENAPKRSMSAYFFFASDFRK----KHPDLS-VTETSKAAGAAWKELSDEMKKPYEAMA 345
Query: 110 EKLKSEYGKKMNA 122
+K K Y ++M A
Sbjct: 346 QKDKERYQREMAA 358
>gi|297302803|ref|XP_001082943.2| PREDICTED: high mobility group protein B1-like [Macaca mulatta]
Length = 169
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN PKRPPS+FF+F E+R K E+P + V K G W + + +K PYE KA
Sbjct: 50 KDPNVPKRPPSSFFLFCSEYRPKTKGEHPGL-PFDDVAKNLGETWNNTAAGDKQPYEKKA 108
Query: 110 EKLKSEYGKKMNAYNKKQDGDEA 132
KLK++Y + AY K D A
Sbjct: 109 AKLKAKYERDTAAYRAKGKPDAA 131
>gi|344299407|ref|XP_003421377.1| PREDICTED: FACT complex subunit SSRP1 [Loxodonta africana]
Length = 709
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|309265997|ref|XP_003086707.1| PREDICTED: uncharacterized protein LOC667284 [Mus musculus]
Length = 433
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F + K E+P+++ + V K G W + + +K PY
Sbjct: 85 KKKFKDPNAPKRPPSAFFLFYSVYYPKIKGEHPDLS-IGDVAKKLGEMWNNAAADDKQPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKKQDGDEA 132
E KA KLK +Y K + AY K D A
Sbjct: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAA 170
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKA 109
DP KP+ S++ F++ RK KK++P+ + S K +WK+MS EK +E A
Sbjct: 3 DPKKPRGKMSSYAFFMQTCRKEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 62
Query: 110 EKLKSEYGKKMNAY 123
+ K+ Y +K+ Y
Sbjct: 63 KADKARYKRKIKTY 76
>gi|299748049|ref|XP_001837422.2| hypothetical protein CC1G_01334 [Coprinopsis cinerea okayama7#130]
gi|298407795|gb|EAU84338.2| hypothetical protein CC1G_01334 [Coprinopsis cinerea okayama7#130]
Length = 558
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 39 KRQGKREKKAKKDPNKPKRPPSAFFVFLEEFR---KTFKKENPNVTAVSAVGKAAGGKWK 95
++ GK K KDPN PK+P SA+F+FL+ R K K+ + T + A KW+
Sbjct: 425 RKAGKSRKGNIKDPNAPKKPLSAYFMFLQRIRADPKLVKEIFGDETETTKQSVLAAAKWR 484
Query: 96 SMSPAEKAPYESKAEKLKSEY 116
SM+ AE+ P+ ++AE+ K EY
Sbjct: 485 SMTDAERQPFLAQAEQEKMEY 505
>gi|156369656|ref|XP_001628091.1| predicted protein [Nematostella vectensis]
gi|156215058|gb|EDO36028.1| predicted protein [Nematostella vectensis]
Length = 180
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKR SA+F F+ R KK+NPN + A+ K G W M+ +K Y+ A+
Sbjct: 89 DPNKPKRCLSAYFHFINLKRDDVKKDNPNASG-GALSKVLGEMWSKMTDDDKTQYQDMAK 147
Query: 111 KLKSEYGKKMNAYNKKQDGDEASDKSKSEVNDEDE 145
K K Y +M A+ +DG + ++K++ +EDE
Sbjct: 148 KDKVRYESEMKAF---KDGKLPAKQNKTKEVEEDE 179
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
NKPK SA+ FL++ R+ ++E + ++ K + KWK+MS EK + KA K
Sbjct: 1 NKPKGAKSAYNFFLQDQREKLQREEGKFS-LADFSKVSAEKWKNMSEEEKETFVQKAGKD 59
Query: 113 KSEYGKKMNAYN 124
K + ++M +Y
Sbjct: 60 KERFKEEMQSYT 71
>gi|195167323|ref|XP_002024483.1| GL15829 [Drosophila persimilis]
gi|194107881|gb|EDW29924.1| GL15829 [Drosophila persimilis]
Length = 173
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+GK+ K+ K DPN PKR SAFF F + R K NP V + K G KW + P
Sbjct: 37 RGKKRKQIK-DPNAPKRSLSAFFWFCNDERNKVKALNPEY-GVGDIAKELGRKWSDVDPE 94
Query: 101 EKAPYESKAEKLKSEYGKKMNAY 123
K YES AE+ K+ Y ++M Y
Sbjct: 95 VKQKYESMAERDKARYEREMTEY 117
>gi|301774634|ref|XP_002922750.1| PREDICTED: FACT complex subunit SSRP1-like [Ailuropoda melanoleuca]
Length = 709
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|402889604|ref|XP_003908101.1| PREDICTED: high mobility group protein B1-like [Papio anubis]
Length = 198
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K EKK KDP+ P+RPP AFFVF + R K E+P ++ V K A W + + A+K
Sbjct: 82 KGEKKKFKDPSAPRRPPLAFFVFCSKNRPKIKGEHPGLSIDDVVKKLA-EMWNNTAVADK 140
Query: 103 APYESKAEKLKSEYGKKMNAYNKK 126
Y+ A KLK +Y K + AY K
Sbjct: 141 QFYKKVAAKLKEKYKKDIAAYRTK 164
>gi|296218242|ref|XP_002755324.1| PREDICTED: FACT complex subunit SSRP1 [Callithrix jacchus]
Length = 709
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|417404085|gb|JAA48818.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 709
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|344230059|gb|EGV61944.1| HMG-box [Candida tenuis ATCC 10573]
Length = 259
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 10/130 (7%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKE--NPNVTAVSAVGKAAGGKWKSMSPAEKAPYES 107
+DPN PKRP +A+ +F E ++ K E + ++++V +GK WK++ + PY
Sbjct: 111 RDPNLPKRPTNAYLIFCESEKERIKNETGDSSLSSVHDLGKNLVEAWKNLDEEARKPYHK 170
Query: 108 KAEKLKSEYGKKMNAYNKKQ----DGDEASDKSKSEVNDEDEASGEEEHQLEPEPEPEQD 163
E K+ Y ++M AY+ K D A + + +++ E E G E++ L + E D
Sbjct: 171 IFEDEKARYRREMIAYSLKNSDPLDATRADTEGEIDLDGEAEVEGNEDNDL----DNEND 226
Query: 164 EDEEVEEDED 173
+ + ED++
Sbjct: 227 QTNIINEDDN 236
>gi|410973949|ref|XP_003993410.1| PREDICTED: FACT complex subunit SSRP1 [Felis catus]
Length = 709
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|383872505|ref|NP_001244820.1| FACT complex subunit SSRP1 [Macaca mulatta]
gi|402893460|ref|XP_003909913.1| PREDICTED: FACT complex subunit SSRP1 [Papio anubis]
gi|355566511|gb|EHH22890.1| Facilitates chromatin transcription complex subunit SSRP1 [Macaca
mulatta]
gi|355752113|gb|EHH56233.1| Facilitates chromatin transcription complex subunit SSRP1 [Macaca
fascicularis]
gi|380784229|gb|AFE63990.1| FACT complex subunit SSRP1 [Macaca mulatta]
gi|383421069|gb|AFH33748.1| FACT complex subunit SSRP1 [Macaca mulatta]
gi|384949008|gb|AFI38109.1| FACT complex subunit SSRP1 [Macaca mulatta]
Length = 709
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|385302209|gb|EIF46351.1| nucleosome binding protein [Dekkera bruxellensis AWRI1499]
Length = 91
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
G++ + KKDPN PKR SA+ F E R + ENP + A +GK G KWK++
Sbjct: 1 MGRKGTRKKKDPNAPKRSLSAYMFFANEQRDIVRAENPGI-AFGQIGKILGEKWKALDKK 59
Query: 101 EKAPYESKAEKLKSEY 116
+ PY++KA K Y
Sbjct: 60 GREPYDAKAAADKKRY 75
>gi|440911425|gb|ELR61099.1| High mobility group protein B3, partial [Bos grunniens mutus]
Length = 192
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G R GK KKDP PKR PS +F EF K +P ++ + V K G W
Sbjct: 79 DYGPARGGK-----KKDPKAPKRLPSGCLLFCSEFHPKIKSTHPGIS-IRDVAKKLGEMW 132
Query: 95 KSMSPAEKAPYESKAEKLK 113
++S +EK PY +KA KLK
Sbjct: 133 NNLSDSEKQPYINKAAKLK 151
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAP 104
K A DP KPK A+ F++ R+ KK+N V A K +WK+MS EK+
Sbjct: 2 KMAISDPKKPKGKMCAYAFFVQMCREEHKKKNSEVPVNFAEFSKKCSERWKTMSRKEKSK 61
Query: 105 YESKAEKLKSEYGKKMNAYNKKQDG 129
++ A+ K Y ++M Y + G
Sbjct: 62 FDEMAKVYKMHYDQEMKDYGPARGG 86
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.298 0.121 0.324
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,084,173,584
Number of Sequences: 23463169
Number of extensions: 139276394
Number of successful extensions: 3575082
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 28210
Number of HSP's successfully gapped in prelim test: 29197
Number of HSP's that attempted gapping in prelim test: 2242270
Number of HSP's gapped (non-prelim): 675559
length of query: 180
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 47
effective length of database: 9,238,593,890
effective search space: 434213912830
effective search space used: 434213912830
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (22.0 bits)
S2: 72 (32.3 bits)