Query 030291
Match_columns 180
No_of_seqs 125 out of 1221
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 18:36:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030291.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030291hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 100.0 6.1E-28 2.1E-32 184.1 14.6 169 4-180 170-345 (353)
2 3p9c_A Caffeic acid O-methyltr 99.9 3.9E-26 1.3E-30 174.8 18.0 165 13-180 199-364 (364)
3 3reo_A (ISO)eugenol O-methyltr 99.9 5.2E-26 1.8E-30 174.4 17.8 172 5-180 194-366 (368)
4 3lst_A CALO1 methyltransferase 99.9 4.3E-26 1.5E-30 173.7 15.1 168 4-180 175-347 (348)
5 1fp2_A Isoflavone O-methyltran 99.9 1.6E-25 5.4E-30 170.8 17.5 167 13-180 186-352 (352)
6 3i53_A O-methyltransferase; CO 99.9 8.3E-26 2.8E-30 171.1 14.0 165 3-180 159-331 (332)
7 1zg3_A Isoflavanone 4'-O-methy 99.9 1.8E-25 6.1E-30 170.9 15.8 176 5-180 183-358 (358)
8 3gwz_A MMCR; methyltransferase 99.9 1E-25 3.5E-30 172.8 13.3 167 4-180 193-368 (369)
9 1fp1_D Isoliquiritigenin 2'-O- 99.9 9.8E-25 3.4E-29 167.6 16.4 165 13-180 207-372 (372)
10 4gek_A TRNA (CMO5U34)-methyltr 99.9 2E-24 6.8E-29 158.3 13.6 165 13-180 68-257 (261)
11 2ip2_A Probable phenazine-spec 99.9 2E-24 6.9E-29 163.5 13.7 167 4-180 159-333 (334)
12 3dp7_A SAM-dependent methyltra 99.9 5.2E-24 1.8E-28 163.0 12.4 164 14-180 178-354 (363)
13 1qzz_A RDMB, aclacinomycin-10- 99.9 5.9E-24 2E-28 163.2 12.2 168 4-180 173-355 (374)
14 1tw3_A COMT, carminomycin 4-O- 99.9 8.6E-24 3E-28 161.6 11.9 167 5-180 175-355 (360)
15 3mcz_A O-methyltransferase; ad 99.9 1.6E-23 5.4E-28 159.7 12.8 166 4-179 169-347 (352)
16 2r3s_A Uncharacterized protein 99.9 4.6E-23 1.6E-27 156.0 11.9 166 5-178 155-332 (335)
17 1x19_A CRTF-related protein; m 99.9 2.2E-22 7.6E-27 153.7 15.5 166 4-180 181-358 (359)
18 3dtn_A Putative methyltransfer 99.9 5.4E-22 1.8E-26 143.0 15.5 163 13-178 42-223 (234)
19 3dh0_A SAM dependent methyltra 99.9 1.3E-21 4.3E-26 139.7 12.9 152 5-179 29-191 (219)
20 3ou2_A SAM-dependent methyltra 99.9 3.3E-20 1.1E-24 132.0 16.0 150 13-169 44-205 (218)
21 3ujc_A Phosphoethanolamine N-m 99.9 1.7E-20 5.9E-25 137.2 14.8 153 4-169 46-206 (266)
22 3hnr_A Probable methyltransfer 99.9 3.7E-21 1.3E-25 137.3 10.6 159 5-170 37-202 (220)
23 3bus_A REBM, methyltransferase 99.8 5.5E-21 1.9E-25 140.7 10.8 154 4-169 52-216 (273)
24 3l8d_A Methyltransferase; stru 99.8 1.3E-20 4.5E-25 136.2 11.8 143 13-169 51-200 (242)
25 3dlc_A Putative S-adenosyl-L-m 99.8 8.6E-22 2.9E-26 140.2 5.2 154 13-173 42-207 (219)
26 1nkv_A Hypothetical protein YJ 99.8 1.6E-20 5.3E-25 137.0 11.8 150 4-168 27-186 (256)
27 3pfg_A N-methyltransferase; N, 99.8 1.2E-20 3.9E-25 138.3 10.9 162 13-179 48-247 (263)
28 1vl5_A Unknown conserved prote 99.8 1.4E-20 4.8E-25 137.7 11.0 152 5-169 29-190 (260)
29 3h2b_A SAM-dependent methyltra 99.8 2.6E-20 9E-25 131.4 11.3 139 15-171 41-184 (203)
30 1xtp_A LMAJ004091AAA; SGPP, st 99.8 3.8E-20 1.3E-24 134.7 12.2 148 5-171 85-240 (254)
31 2o57_A Putative sarcosine dime 99.8 5E-20 1.7E-24 137.2 13.0 144 13-169 80-234 (297)
32 3i9f_A Putative type 11 methyl 99.8 8.8E-21 3E-25 130.3 8.2 149 3-179 7-158 (170)
33 1kpg_A CFA synthase;, cyclopro 99.8 3.6E-20 1.2E-24 137.3 12.0 157 5-169 56-228 (287)
34 3dli_A Methyltransferase; PSI- 99.8 1.1E-19 3.7E-24 131.5 13.5 142 13-171 39-186 (240)
35 3hem_A Cyclopropane-fatty-acyl 99.8 3.7E-20 1.3E-24 138.3 10.8 158 5-171 64-245 (302)
36 3e23_A Uncharacterized protein 99.8 8.6E-20 2.9E-24 129.5 12.1 138 13-169 41-182 (211)
37 2p35_A Trans-aconitate 2-methy 99.8 2.9E-20 9.8E-25 135.7 9.6 154 4-164 24-185 (259)
38 1pjz_A Thiopurine S-methyltran 99.8 2.4E-20 8E-25 131.9 8.7 134 13-169 20-176 (203)
39 3mgg_A Methyltransferase; NYSG 99.8 2.2E-20 7.7E-25 137.6 9.0 150 13-169 35-198 (276)
40 3kkz_A Uncharacterized protein 99.8 1.7E-19 5.7E-24 132.5 12.9 143 13-170 44-197 (267)
41 3ccf_A Cyclopropane-fatty-acyl 99.8 6.8E-20 2.3E-24 135.4 10.9 157 4-169 48-210 (279)
42 3g5l_A Putative S-adenosylmeth 99.8 7.4E-20 2.5E-24 133.3 10.5 152 13-170 42-217 (253)
43 2p7i_A Hypothetical protein; p 99.8 6.6E-20 2.3E-24 132.7 10.2 146 14-168 41-198 (250)
44 4fsd_A Arsenic methyltransfera 99.8 1.1E-19 3.7E-24 140.0 12.0 145 13-168 81-250 (383)
45 3f4k_A Putative methyltransfer 99.8 4.1E-19 1.4E-23 129.5 14.2 142 13-169 44-196 (257)
46 1xxl_A YCGJ protein; structura 99.8 1.3E-19 4.3E-24 131.1 11.2 151 6-169 14-174 (239)
47 2fk8_A Methoxy mycolic acid sy 99.8 6.8E-20 2.3E-24 137.8 10.1 160 4-169 81-254 (318)
48 4htf_A S-adenosylmethionine-de 99.8 6.5E-20 2.2E-24 135.8 9.6 151 15-172 68-235 (285)
49 2ex4_A Adrenal gland protein A 99.8 2.1E-19 7.1E-24 130.1 11.6 139 15-171 79-227 (241)
50 3bxo_A N,N-dimethyltransferase 99.8 5.9E-19 2E-23 127.2 13.2 162 14-180 39-238 (239)
51 1ve3_A Hypothetical protein PH 99.8 3.6E-19 1.2E-23 127.4 11.2 162 13-180 36-226 (227)
52 3jwh_A HEN1; methyltransferase 99.8 9.7E-20 3.3E-24 129.8 8.0 143 13-166 27-189 (217)
53 3ocj_A Putative exported prote 99.8 2.3E-19 7.8E-24 134.2 10.1 153 13-169 116-291 (305)
54 3jwg_A HEN1, methyltransferase 99.8 1.8E-19 6.1E-24 128.5 8.9 144 13-166 27-189 (219)
55 3ege_A Putative methyltransfer 99.8 4.1E-19 1.4E-23 130.0 10.9 149 5-169 26-178 (261)
56 3lcc_A Putative methyl chlorid 99.8 2.5E-19 8.7E-24 129.1 9.3 132 16-170 67-208 (235)
57 3g07_A 7SK snRNA methylphospha 99.8 7.9E-20 2.7E-24 136.0 6.6 156 4-169 35-269 (292)
58 3e8s_A Putative SAM dependent 99.8 5.7E-19 2E-23 126.1 9.9 147 13-168 50-208 (227)
59 3sm3_A SAM-dependent methyltra 99.8 9.1E-19 3.1E-23 125.8 10.9 151 13-168 28-206 (235)
60 3gu3_A Methyltransferase; alph 99.8 6.4E-19 2.2E-23 130.5 10.0 150 13-168 20-189 (284)
61 3g2m_A PCZA361.24; SAM-depende 99.8 2.8E-19 9.7E-24 133.3 8.0 151 15-170 82-275 (299)
62 3vc1_A Geranyl diphosphate 2-C 99.8 2.4E-18 8.3E-23 129.0 13.1 144 13-169 115-269 (312)
63 3bkx_A SAM-dependent methyltra 99.8 1.3E-18 4.6E-23 128.0 10.9 157 5-169 35-219 (275)
64 2gb4_A Thiopurine S-methyltran 99.8 4E-18 1.4E-22 124.2 12.6 133 14-169 67-227 (252)
65 3bkw_A MLL3908 protein, S-aden 99.8 8E-19 2.7E-23 126.8 8.7 151 13-169 41-214 (243)
66 4hg2_A Methyltransferase type 99.8 1.5E-18 5E-23 126.8 9.3 97 14-118 38-138 (257)
67 2qe6_A Uncharacterized protein 99.8 1.9E-18 6.3E-23 127.5 9.6 140 15-165 77-238 (274)
68 1y8c_A S-adenosylmethionine-de 99.8 2.7E-18 9.2E-23 124.1 9.9 150 15-169 37-225 (246)
69 2aot_A HMT, histamine N-methyl 99.8 2.9E-18 9.9E-23 127.5 9.9 143 14-166 51-218 (292)
70 4e2x_A TCAB9; kijanose, tetron 99.8 2.9E-18 9.8E-23 133.3 9.6 148 4-170 98-254 (416)
71 3cc8_A Putative methyltransfer 99.8 6E-18 2E-22 121.0 10.2 145 14-169 31-185 (230)
72 1vlm_A SAM-dependent methyltra 99.7 7.2E-18 2.4E-22 120.3 10.2 137 16-169 48-188 (219)
73 3cgg_A SAM-dependent methyltra 99.7 7.1E-17 2.4E-21 112.6 14.2 126 13-169 44-175 (195)
74 3ggd_A SAM-dependent methyltra 99.7 2.9E-18 1E-22 124.2 7.2 149 13-168 54-218 (245)
75 2xvm_A Tellurite resistance pr 99.7 1.9E-17 6.5E-22 116.1 11.0 135 13-169 30-173 (199)
76 2yqz_A Hypothetical protein TT 99.7 1.1E-17 3.6E-22 122.3 9.5 147 13-167 37-194 (263)
77 2a14_A Indolethylamine N-methy 99.7 2.1E-18 7.2E-23 126.5 5.3 140 13-169 53-238 (263)
78 3d2l_A SAM-dependent methyltra 99.7 9E-17 3.1E-21 116.0 13.7 97 13-115 31-137 (243)
79 2p8j_A S-adenosylmethionine-de 99.7 4.7E-17 1.6E-21 115.0 10.5 148 13-167 21-181 (209)
80 3g5t_A Trans-aconitate 3-methy 99.7 2.2E-17 7.6E-22 123.0 8.8 98 14-117 35-151 (299)
81 1ri5_A MRNA capping enzyme; me 99.7 6.5E-17 2.2E-21 120.1 10.8 153 13-169 62-250 (298)
82 3thr_A Glycine N-methyltransfe 99.7 2.1E-17 7.1E-22 122.7 8.1 100 13-117 55-177 (293)
83 3grz_A L11 mtase, ribosomal pr 99.7 9.1E-17 3.1E-21 113.4 10.6 131 13-180 58-196 (205)
84 2i62_A Nicotinamide N-methyltr 99.7 2.4E-17 8.2E-22 120.5 7.7 140 14-170 55-240 (265)
85 1wzn_A SAM-dependent methyltra 99.7 2.3E-16 7.9E-21 114.6 12.7 97 13-114 39-144 (252)
86 2zfu_A Nucleomethylin, cerebra 99.7 3E-16 1E-20 111.5 12.5 121 14-179 66-189 (215)
87 2kw5_A SLR1183 protein; struct 99.7 1.5E-16 5.3E-21 111.9 10.6 134 14-169 29-171 (202)
88 3m70_A Tellurite resistance pr 99.7 1.2E-16 4.2E-21 118.2 10.3 133 13-167 118-258 (286)
89 2g72_A Phenylethanolamine N-me 99.7 2E-17 6.7E-22 122.8 5.4 139 15-170 71-257 (289)
90 3q87_B N6 adenine specific DNA 99.7 7.1E-16 2.4E-20 105.9 12.6 126 14-177 22-158 (170)
91 3giw_A Protein of unknown func 99.7 1.4E-16 4.7E-21 116.3 9.3 141 15-165 78-243 (277)
92 2gs9_A Hypothetical protein TT 99.7 7.5E-17 2.6E-21 114.2 7.5 131 14-160 35-171 (211)
93 3mq2_A 16S rRNA methyltransfer 99.7 1.7E-16 5.9E-21 113.0 9.3 142 13-169 25-184 (218)
94 1fbn_A MJ fibrillarin homologu 99.7 1.3E-15 4.6E-20 109.4 13.7 145 6-179 67-226 (230)
95 2vdw_A Vaccinia virus capping 99.7 6.8E-16 2.3E-20 115.2 12.5 151 15-169 48-246 (302)
96 4df3_A Fibrillarin-like rRNA/T 99.7 1.3E-15 4.4E-20 109.1 12.8 137 7-171 71-219 (233)
97 3e05_A Precorrin-6Y C5,15-meth 99.7 1.5E-15 5E-20 107.1 12.9 120 5-162 32-161 (204)
98 3ofk_A Nodulation protein S; N 99.7 1.4E-16 4.9E-21 113.1 7.1 100 13-117 49-156 (216)
99 3p2e_A 16S rRNA methylase; met 99.7 4.5E-16 1.5E-20 111.6 9.4 146 13-169 22-185 (225)
100 3iv6_A Putative Zn-dependent a 99.7 4.4E-16 1.5E-20 113.6 9.0 105 5-117 37-150 (261)
101 3htx_A HEN1; HEN1, small RNA m 99.6 1.6E-15 5.3E-20 124.3 10.8 101 13-117 719-836 (950)
102 3bgv_A MRNA CAP guanine-N7 met 99.6 6.9E-16 2.4E-20 115.7 8.0 100 14-117 33-157 (313)
103 1nt2_A Fibrillarin-like PRE-rR 99.6 1.4E-14 4.9E-19 102.7 13.9 136 13-179 55-208 (210)
104 2b3t_A Protein methyltransfera 99.6 1E-14 3.5E-19 107.5 13.1 134 14-179 108-274 (276)
105 3hm2_A Precorrin-6Y C5,15-meth 99.6 1E-15 3.5E-20 105.4 6.9 100 5-116 17-128 (178)
106 2ipx_A RRNA 2'-O-methyltransfe 99.6 8.6E-15 2.9E-19 105.3 11.6 133 13-171 75-219 (233)
107 2nxc_A L11 mtase, ribosomal pr 99.6 9.5E-15 3.3E-19 106.5 11.8 126 13-176 118-251 (254)
108 1dus_A MJ0882; hypothetical pr 99.6 5.4E-15 1.8E-19 102.9 9.4 104 5-116 44-158 (194)
109 3id6_C Fibrillarin-like rRNA/T 99.6 4.5E-14 1.5E-18 101.3 14.0 134 13-172 74-219 (232)
110 1xdz_A Methyltransferase GIDB; 99.6 6.2E-15 2.1E-19 106.5 9.5 121 13-168 68-201 (240)
111 4dzr_A Protein-(glutamine-N5) 99.6 8.5E-16 2.9E-20 108.7 4.6 125 14-169 29-192 (215)
112 3fpf_A Mtnas, putative unchara 99.6 1E-14 3.4E-19 107.7 10.3 96 13-116 120-223 (298)
113 3m33_A Uncharacterized protein 99.6 2.8E-15 9.6E-20 107.4 6.8 114 13-168 46-166 (226)
114 3fzg_A 16S rRNA methylase; met 99.6 4E-15 1.4E-19 102.6 7.3 96 13-116 47-152 (200)
115 1af7_A Chemotaxis receptor met 99.6 4.6E-15 1.6E-19 109.0 7.8 96 15-113 105-250 (274)
116 1g8a_A Fibrillarin-like PRE-rR 99.6 7.2E-14 2.5E-18 100.0 13.7 140 13-179 71-225 (227)
117 3evz_A Methyltransferase; NYSG 99.6 4.1E-14 1.4E-18 101.4 12.5 128 13-171 53-208 (230)
118 3njr_A Precorrin-6Y methylase; 99.6 2.8E-14 9.4E-19 100.8 11.3 120 6-167 48-178 (204)
119 3orh_A Guanidinoacetate N-meth 99.6 2.4E-16 8.2E-21 113.8 0.6 96 14-115 59-170 (236)
120 1yzh_A TRNA (guanine-N(7)-)-me 99.6 5E-14 1.7E-18 100.0 12.4 98 15-115 41-156 (214)
121 2fca_A TRNA (guanine-N(7)-)-me 99.6 3.4E-14 1.2E-18 100.9 11.4 98 15-115 38-153 (213)
122 2pxx_A Uncharacterized protein 99.6 3.6E-15 1.2E-19 105.5 6.1 102 13-118 40-162 (215)
123 3bwc_A Spermidine synthase; SA 99.6 2.5E-14 8.6E-19 106.8 10.9 129 14-169 94-240 (304)
124 3mti_A RRNA methylase; SAM-dep 99.6 1.5E-14 5E-19 100.4 9.0 100 13-117 20-137 (185)
125 3uwp_A Histone-lysine N-methyl 99.6 4.2E-15 1.4E-19 113.8 6.2 112 3-122 163-295 (438)
126 1yb2_A Hypothetical protein TA 99.6 1.4E-14 4.8E-19 106.7 8.7 100 5-116 102-212 (275)
127 3kr9_A SAM-dependent methyltra 99.5 8.1E-14 2.8E-18 99.3 11.0 130 13-179 13-156 (225)
128 3eey_A Putative rRNA methylase 99.5 3.6E-14 1.2E-18 99.3 8.8 103 13-118 20-142 (197)
129 4dcm_A Ribosomal RNA large sub 99.5 3.4E-14 1.2E-18 108.9 9.0 106 5-115 214-334 (375)
130 3g89_A Ribosomal RNA small sub 99.5 2.8E-14 9.7E-19 103.7 8.1 121 14-169 79-212 (249)
131 3mb5_A SAM-dependent methyltra 99.5 3.6E-14 1.2E-18 103.3 8.5 98 6-115 86-194 (255)
132 3hp7_A Hemolysin, putative; st 99.5 6.8E-14 2.3E-18 103.3 9.5 138 15-169 85-232 (291)
133 3dxy_A TRNA (guanine-N(7)-)-me 99.5 3.6E-14 1.2E-18 101.2 7.7 98 15-115 34-150 (218)
134 3lec_A NADB-rossmann superfami 99.5 2E-13 6.9E-18 97.4 11.4 130 13-179 19-162 (230)
135 3lpm_A Putative methyltransfer 99.5 1.2E-13 4.1E-18 100.9 10.3 123 13-168 46-200 (259)
136 2ld4_A Anamorsin; methyltransf 99.5 4.8E-14 1.6E-18 97.1 7.4 109 13-161 10-128 (176)
137 2h00_A Methyltransferase 10 do 99.5 4.3E-15 1.5E-19 108.2 2.2 144 15-169 65-238 (254)
138 2yxd_A Probable cobalt-precorr 99.5 5.6E-14 1.9E-18 96.8 7.8 119 5-166 27-154 (183)
139 1jsx_A Glucose-inhibited divis 99.5 1.1E-13 3.7E-18 97.6 9.3 91 15-114 65-164 (207)
140 2pjd_A Ribosomal RNA small sub 99.5 1.8E-14 6.3E-19 109.3 5.6 100 14-116 195-304 (343)
141 2avn_A Ubiquinone/menaquinone 99.5 3.8E-14 1.3E-18 103.5 6.8 148 14-171 53-215 (260)
142 2frn_A Hypothetical protein PH 99.5 5.2E-13 1.8E-17 98.5 12.9 121 13-165 123-253 (278)
143 1l3i_A Precorrin-6Y methyltran 99.5 5.6E-14 1.9E-18 97.5 7.1 118 6-163 26-154 (192)
144 1ej0_A FTSJ; methyltransferase 99.5 3.8E-13 1.3E-17 92.0 11.1 97 13-116 20-137 (180)
145 3lbf_A Protein-L-isoaspartate 99.5 6.1E-14 2.1E-18 99.1 7.0 97 5-116 69-175 (210)
146 2plw_A Ribosomal RNA methyltra 99.5 6E-13 2E-17 93.3 11.9 96 13-115 20-154 (201)
147 2pwy_A TRNA (adenine-N(1)-)-me 99.5 6.6E-14 2.3E-18 101.8 7.1 99 5-115 88-198 (258)
148 3bzb_A Uncharacterized protein 99.5 1.8E-13 6.3E-18 101.1 9.1 97 14-114 78-204 (281)
149 1zx0_A Guanidinoacetate N-meth 99.5 3.6E-14 1.2E-18 102.2 5.2 99 14-116 59-171 (236)
150 3lcv_B Sisomicin-gentamicin re 99.5 5.2E-14 1.8E-18 101.4 5.8 134 13-171 130-273 (281)
151 1u2z_A Histone-lysine N-methyl 99.5 5.4E-14 1.9E-18 109.1 6.2 108 5-120 234-364 (433)
152 3gnl_A Uncharacterized protein 99.5 5.9E-13 2E-17 95.8 11.1 129 13-178 19-161 (244)
153 3p9n_A Possible methyltransfer 99.5 2.4E-13 8.1E-18 94.7 8.8 99 14-117 43-155 (189)
154 2y1w_A Histone-arginine methyl 99.5 1E-13 3.4E-18 105.5 7.1 104 5-114 42-154 (348)
155 4azs_A Methyltransferase WBDD; 99.5 4.5E-14 1.5E-18 113.7 5.1 103 13-120 64-178 (569)
156 2yxe_A Protein-L-isoaspartate 99.5 1.1E-13 3.7E-18 98.2 6.5 99 5-116 69-178 (215)
157 1o54_A SAM-dependent O-methylt 99.5 1.9E-13 6.4E-18 100.8 7.9 93 13-115 110-213 (277)
158 2bm8_A Cephalosporin hydroxyla 99.5 8E-13 2.7E-17 95.3 11.1 95 14-116 80-188 (236)
159 1o9g_A RRNA methyltransferase; 99.4 9.5E-14 3.2E-18 100.9 5.9 99 15-116 51-215 (250)
160 3ckk_A TRNA (guanine-N(7)-)-me 99.4 3.6E-13 1.2E-17 97.0 8.8 99 14-115 45-168 (235)
161 3opn_A Putative hemolysin; str 99.4 2E-13 7E-18 98.1 7.3 138 15-169 37-184 (232)
162 1vbf_A 231AA long hypothetical 99.4 2.3E-13 7.7E-18 97.6 7.2 97 5-116 62-166 (231)
163 2ozv_A Hypothetical protein AT 99.4 2.6E-13 9E-18 99.2 7.5 100 13-115 34-170 (260)
164 3adn_A Spermidine synthase; am 99.4 2.2E-12 7.4E-17 95.8 12.5 99 14-115 82-198 (294)
165 3sso_A Methyltransferase; macr 99.4 4.2E-13 1.4E-17 102.5 8.7 95 14-117 215-326 (419)
166 3q7e_A Protein arginine N-meth 99.4 2.6E-13 8.7E-18 103.2 7.4 95 13-113 64-171 (349)
167 1dl5_A Protein-L-isoaspartate 99.4 2.2E-13 7.4E-18 102.4 6.9 98 5-115 67-175 (317)
168 3tfw_A Putative O-methyltransf 99.4 1.9E-13 6.6E-18 99.2 6.3 98 13-118 61-173 (248)
169 3b3j_A Histone-arginine methyl 99.4 1.7E-13 5.8E-18 108.1 6.3 103 5-113 150-261 (480)
170 2fyt_A Protein arginine N-meth 99.4 5.1E-13 1.7E-17 101.2 8.6 94 13-112 62-168 (340)
171 3u81_A Catechol O-methyltransf 99.4 1.1E-13 3.8E-18 98.7 4.7 98 14-117 57-172 (221)
172 3r0q_C Probable protein argini 99.4 3.9E-13 1.3E-17 103.2 7.7 100 13-116 61-170 (376)
173 3r3h_A O-methyltransferase, SA 99.4 5.3E-13 1.8E-17 96.5 8.0 98 13-118 58-173 (242)
174 3dmg_A Probable ribosomal RNA 99.4 7.5E-13 2.6E-17 101.6 9.1 96 15-115 233-340 (381)
175 2wa2_A Non-structural protein 99.4 8.8E-13 3E-17 97.1 8.9 97 13-116 80-194 (276)
176 3ntv_A MW1564 protein; rossman 99.4 1.6E-13 5.4E-18 98.7 4.5 96 13-116 69-177 (232)
177 2oxt_A Nucleoside-2'-O-methylt 99.4 1.8E-12 6.3E-17 94.8 9.9 98 13-117 72-187 (265)
178 1p91_A Ribosomal RNA large sub 99.4 5E-13 1.7E-17 97.9 6.9 93 14-118 84-181 (269)
179 3duw_A OMT, O-methyltransferas 99.4 4.1E-13 1.4E-17 95.7 6.1 97 13-117 56-169 (223)
180 3tr6_A O-methyltransferase; ce 99.4 5.2E-13 1.8E-17 95.3 6.5 97 14-118 63-177 (225)
181 1jg1_A PIMT;, protein-L-isoasp 99.4 3.7E-13 1.3E-17 96.9 5.7 92 13-116 89-190 (235)
182 1ws6_A Methyltransferase; stru 99.4 2.7E-13 9.3E-18 92.5 4.6 94 15-117 41-149 (171)
183 2b25_A Hypothetical protein; s 99.4 1.2E-13 4.1E-18 104.5 3.1 100 5-116 97-220 (336)
184 3gjy_A Spermidine synthase; AP 99.4 9.9E-13 3.4E-17 98.1 7.9 97 17-116 91-201 (317)
185 1nv8_A HEMK protein; class I a 99.4 6E-13 2.1E-17 98.4 6.5 95 14-113 122-247 (284)
186 2nyu_A Putative ribosomal RNA 99.4 3.6E-12 1.2E-16 88.9 10.1 97 13-116 20-146 (196)
187 2gpy_A O-methyltransferase; st 99.4 5.6E-13 1.9E-17 95.7 6.0 96 13-116 52-161 (233)
188 3dou_A Ribosomal RNA large sub 99.4 3.2E-12 1.1E-16 89.2 9.6 102 5-116 16-140 (191)
189 2ift_A Putative methylase HI07 99.4 1.1E-12 3.8E-17 92.3 6.8 96 15-117 53-165 (201)
190 3gdh_A Trimethylguanosine synt 99.4 2.1E-13 7.1E-18 98.4 3.0 134 15-171 78-221 (241)
191 2esr_A Methyltransferase; stru 99.4 1E-12 3.5E-17 90.4 5.8 97 14-117 30-140 (177)
192 1sui_A Caffeoyl-COA O-methyltr 99.3 1.9E-12 6.6E-17 93.9 7.3 96 14-117 78-192 (247)
193 3dr5_A Putative O-methyltransf 99.3 9.3E-13 3.2E-17 94.0 5.5 92 17-116 58-164 (221)
194 2fhp_A Methylase, putative; al 99.3 1.8E-12 6.2E-17 89.7 6.6 97 14-117 43-156 (187)
195 1g6q_1 HnRNP arginine N-methyl 99.3 1.8E-12 6.2E-17 97.8 7.0 97 13-113 36-143 (328)
196 1ixk_A Methyltransferase; open 99.3 5.4E-12 1.9E-16 94.6 9.3 103 13-118 116-249 (315)
197 3frh_A 16S rRNA methylase; met 99.3 2.4E-12 8.1E-17 91.9 6.9 95 14-116 104-206 (253)
198 2vdv_E TRNA (guanine-N(7)-)-me 99.3 2.4E-12 8.1E-17 93.3 6.7 93 14-114 48-172 (246)
199 3c3p_A Methyltransferase; NP_9 99.3 1.4E-12 5E-17 92.1 4.7 95 14-116 55-161 (210)
200 1i9g_A Hypothetical protein RV 99.3 3.1E-12 1.1E-16 94.1 6.3 100 5-116 91-204 (280)
201 2pbf_A Protein-L-isoaspartate 99.3 1.3E-11 4.4E-16 88.1 9.2 93 13-116 78-194 (227)
202 1r18_A Protein-L-isoaspartate( 99.3 1.5E-12 5.2E-17 93.1 4.3 92 13-115 82-194 (227)
203 2yvl_A TRMI protein, hypotheti 99.3 8.4E-12 2.9E-16 90.1 8.2 92 13-116 89-191 (248)
204 1xj5_A Spermidine synthase 1; 99.3 3.1E-12 1.1E-16 96.5 6.0 98 14-114 119-234 (334)
205 2qm3_A Predicted methyltransfe 99.3 4E-11 1.4E-15 91.9 12.3 96 15-117 172-279 (373)
206 2fpo_A Methylase YHHF; structu 99.3 1E-11 3.6E-16 87.3 8.0 96 15-117 54-162 (202)
207 2hnk_A SAM-dependent O-methylt 99.3 3.1E-12 1.1E-16 92.2 5.3 97 13-117 58-183 (239)
208 2i7c_A Spermidine synthase; tr 99.3 4.7E-12 1.6E-16 93.6 6.3 98 14-114 77-191 (283)
209 1mjf_A Spermidine synthase; sp 99.3 5.1E-12 1.7E-16 93.3 6.4 97 14-114 74-192 (281)
210 1i1n_A Protein-L-isoaspartate 99.3 4.2E-12 1.4E-16 90.6 5.6 93 13-116 75-183 (226)
211 2p41_A Type II methyltransfera 99.3 1.7E-11 5.9E-16 91.4 9.1 96 13-114 80-190 (305)
212 2cmg_A Spermidine synthase; tr 99.3 1.1E-11 3.9E-16 90.5 7.9 89 14-114 71-170 (262)
213 3a27_A TYW2, uncharacterized p 99.3 1.3E-11 4.4E-16 90.7 8.1 97 13-118 117-222 (272)
214 1uir_A Polyamine aminopropyltr 99.3 8.3E-12 2.8E-16 93.6 7.1 99 14-115 76-195 (314)
215 3c3y_A Pfomt, O-methyltransfer 99.3 1.1E-11 3.8E-16 89.3 7.5 95 13-115 68-181 (237)
216 3cbg_A O-methyltransferase; cy 99.3 4.1E-12 1.4E-16 91.3 5.2 96 14-117 71-184 (232)
217 2b2c_A Spermidine synthase; be 99.3 5.2E-12 1.8E-16 94.6 5.9 98 14-114 107-221 (314)
218 2avd_A Catechol-O-methyltransf 99.3 5.3E-12 1.8E-16 90.2 5.8 97 13-117 67-181 (229)
219 4hc4_A Protein arginine N-meth 99.3 1.5E-11 5E-16 94.0 8.4 95 15-113 83-187 (376)
220 3tma_A Methyltransferase; thum 99.3 1E-11 3.4E-16 94.6 7.3 100 13-115 201-317 (354)
221 2pt6_A Spermidine synthase; tr 99.3 6.8E-12 2.3E-16 94.3 6.1 98 14-114 115-229 (321)
222 2o07_A Spermidine synthase; st 99.3 6.3E-12 2.2E-16 93.8 5.7 99 14-115 94-209 (304)
223 1iy9_A Spermidine synthase; ro 99.2 7.1E-12 2.4E-16 92.3 5.6 98 14-114 74-188 (275)
224 1zq9_A Probable dimethyladenos 99.2 3E-12 1E-16 94.8 2.7 77 3-83 18-103 (285)
225 1ne2_A Hypothetical protein TA 99.2 2.3E-11 7.7E-16 85.3 7.0 88 14-102 50-139 (200)
226 2xyq_A Putative 2'-O-methyl tr 99.2 1.8E-10 6.3E-15 85.1 11.7 92 13-115 61-171 (290)
227 1wy7_A Hypothetical protein PH 99.2 1.6E-10 5.4E-15 81.3 10.8 88 14-102 48-141 (207)
228 3ajd_A Putative methyltransfer 99.2 6E-11 2.1E-15 87.2 8.5 105 13-120 81-216 (274)
229 1inl_A Spermidine synthase; be 99.2 2E-11 6.8E-16 90.8 5.7 98 14-114 89-204 (296)
230 3tm4_A TRNA (guanine N2-)-meth 99.2 1.5E-10 5.2E-15 88.7 10.5 120 14-169 216-352 (373)
231 2igt_A SAM dependent methyltra 99.2 3.3E-10 1.1E-14 85.5 11.7 94 15-115 153-272 (332)
232 2ih2_A Modification methylase 99.2 1.5E-10 5.1E-15 89.9 10.1 97 14-116 38-165 (421)
233 2yxl_A PH0851 protein, 450AA l 99.2 1.2E-10 4.2E-15 91.3 9.1 104 13-119 257-393 (450)
234 3k6r_A Putative transferase PH 99.1 6.4E-10 2.2E-14 81.7 10.4 119 13-163 123-251 (278)
235 1sqg_A SUN protein, FMU protei 99.1 2.5E-10 8.5E-15 89.0 8.8 104 13-119 244-378 (429)
236 2b78_A Hypothetical protein SM 99.1 9.3E-11 3.2E-15 90.2 5.3 98 14-115 211-331 (385)
237 2h1r_A Dimethyladenosine trans 99.1 9.9E-11 3.4E-15 87.2 4.2 96 4-104 33-151 (299)
238 2f8l_A Hypothetical protein LM 99.1 2.9E-10 9.9E-15 86.2 6.7 99 15-116 130-257 (344)
239 3b5i_A S-adenosyl-L-methionine 99.0 1E-08 3.5E-13 78.2 14.9 152 15-169 52-298 (374)
240 3c0k_A UPF0064 protein YCCW; P 99.0 5.5E-10 1.9E-14 86.2 7.5 96 14-115 219-339 (396)
241 2frx_A Hypothetical protein YE 99.0 2.2E-09 7.4E-14 84.7 10.9 102 15-119 117-250 (479)
242 1yub_A Ermam, rRNA methyltrans 99.0 1.2E-10 4.1E-15 84.3 3.2 102 4-114 20-144 (245)
243 2yx1_A Hypothetical protein MJ 99.0 7.3E-10 2.5E-14 83.8 7.3 92 14-117 194-293 (336)
244 3m4x_A NOL1/NOP2/SUN family pr 99.0 6.6E-10 2.3E-14 86.9 7.2 104 13-119 103-238 (456)
245 3gru_A Dimethyladenosine trans 99.0 4.9E-10 1.7E-14 83.0 6.1 77 3-83 40-124 (295)
246 1qam_A ERMC' methyltransferase 99.0 1E-09 3.5E-14 79.4 7.2 62 4-69 21-87 (244)
247 3m6w_A RRNA methylase; rRNA me 99.0 1.3E-09 4.4E-14 85.4 7.3 104 13-119 99-233 (464)
248 2as0_A Hypothetical protein PH 99.0 1.3E-09 4.6E-14 84.1 7.1 100 14-117 216-337 (396)
249 4dmg_A Putative uncharacterize 99.0 2.6E-09 8.9E-14 82.3 8.6 99 14-117 213-328 (393)
250 1wxx_A TT1595, hypothetical pr 98.9 1.5E-09 5E-14 83.5 7.0 97 15-116 209-326 (382)
251 2efj_A 3,7-dimethylxanthine me 98.9 2E-08 6.8E-13 76.8 11.8 150 16-168 53-291 (384)
252 3fut_A Dimethyladenosine trans 98.9 1.9E-09 6.4E-14 79.0 5.7 89 3-97 37-133 (271)
253 3v97_A Ribosomal RNA large sub 98.9 3.6E-09 1.2E-13 87.1 7.4 96 14-115 538-657 (703)
254 1uwv_A 23S rRNA (uracil-5-)-me 98.9 5.5E-09 1.9E-13 81.6 8.1 90 13-113 284-387 (433)
255 2jjq_A Uncharacterized RNA met 98.8 2.4E-08 8.2E-13 77.7 9.9 92 13-114 288-386 (425)
256 3ldg_A Putative uncharacterize 98.8 1.8E-08 6.1E-13 77.4 9.0 108 6-116 187-344 (384)
257 3k0b_A Predicted N6-adenine-sp 98.8 8.6E-09 2.9E-13 79.4 7.2 109 5-116 193-351 (393)
258 1m6y_A S-adenosyl-methyltransf 98.8 3.5E-09 1.2E-13 78.7 4.5 77 3-81 16-106 (301)
259 2qfm_A Spermine synthase; sper 98.8 1.3E-08 4.6E-13 76.9 7.3 97 14-114 187-313 (364)
260 2okc_A Type I restriction enzy 98.8 2.3E-09 7.8E-14 84.0 3.1 102 13-117 169-309 (445)
261 1m6e_X S-adenosyl-L-methionnin 98.8 3.9E-08 1.3E-12 74.5 9.0 151 14-167 50-278 (359)
262 3ftd_A Dimethyladenosine trans 98.8 6.5E-09 2.2E-13 75.3 4.6 64 3-69 21-87 (249)
263 3ldu_A Putative methylase; str 98.8 1.3E-08 4.5E-13 78.2 6.5 103 13-116 193-345 (385)
264 3evf_A RNA-directed RNA polyme 98.7 5.4E-08 1.8E-12 70.6 8.7 98 13-113 72-182 (277)
265 3tqs_A Ribosomal RNA small sub 98.7 5.7E-09 1.9E-13 75.9 2.5 63 3-69 19-86 (255)
266 3o4f_A Spermidine synthase; am 98.7 6.8E-08 2.3E-12 71.2 7.9 98 14-114 82-197 (294)
267 3uzu_A Ribosomal RNA small sub 98.7 3.5E-09 1.2E-13 78.0 0.8 64 4-69 33-101 (279)
268 2qy6_A UPF0209 protein YFCK; s 98.7 1.4E-07 4.8E-12 68.5 9.2 127 15-176 60-242 (257)
269 3bt7_A TRNA (uracil-5-)-methyl 98.6 1.1E-08 3.6E-13 78.4 2.2 88 16-116 214-327 (369)
270 2k4m_A TR8_protein, UPF0146 pr 98.6 8.5E-08 2.9E-12 63.0 5.5 76 13-103 33-114 (153)
271 3gcz_A Polyprotein; flavivirus 98.6 1.4E-07 4.7E-12 68.6 7.1 106 4-114 81-200 (282)
272 1qyr_A KSGA, high level kasuga 98.6 1.5E-08 5E-13 73.6 1.9 63 3-69 11-78 (252)
273 2dul_A N(2),N(2)-dimethylguano 98.6 2E-07 6.7E-12 71.5 7.7 92 15-115 47-164 (378)
274 2r6z_A UPF0341 protein in RSP 98.5 8E-08 2.7E-12 69.9 5.2 71 13-85 81-173 (258)
275 4auk_A Ribosomal RNA large sub 98.5 1.3E-06 4.6E-11 66.1 10.7 84 13-104 209-295 (375)
276 1rjd_A PPM1P, carboxy methyl t 98.5 1E-06 3.5E-11 66.4 10.0 144 14-162 96-281 (334)
277 3axs_A Probable N(2),N(2)-dime 98.5 1.1E-07 3.8E-12 73.0 4.7 92 15-115 52-158 (392)
278 2b9e_A NOL1/NOP2/SUN domain fa 98.4 1E-06 3.4E-11 65.8 8.9 103 13-119 100-238 (309)
279 4gqb_A Protein arginine N-meth 98.4 1.5E-07 5E-12 76.2 4.5 89 16-104 358-459 (637)
280 3v97_A Ribosomal RNA large sub 98.4 5.6E-07 1.9E-11 74.2 7.3 101 13-116 188-348 (703)
281 2ar0_A M.ecoki, type I restric 98.3 6E-07 2E-11 71.9 5.1 101 14-117 168-314 (541)
282 3ll7_A Putative methyltransfer 98.3 4.5E-07 1.5E-11 69.9 4.1 64 15-80 93-170 (410)
283 2oyr_A UPF0341 protein YHIQ; a 98.3 3.8E-07 1.3E-11 66.3 3.3 87 13-104 84-192 (258)
284 3ua3_A Protein arginine N-meth 98.2 1.5E-06 5E-11 70.8 5.6 93 16-111 410-530 (745)
285 3eld_A Methyltransferase; flav 98.2 1.4E-05 4.8E-10 58.5 9.1 99 12-114 78-190 (300)
286 3cvo_A Methyltransferase-like 98.1 1.2E-05 4.2E-10 56.1 8.4 90 13-116 28-154 (202)
287 3iei_A Leucine carboxyl methyl 98.1 8.4E-05 2.9E-09 55.9 13.3 149 15-170 90-282 (334)
288 2px2_A Genome polyprotein [con 98.1 1.2E-05 3.9E-10 57.8 7.8 104 5-114 65-182 (269)
289 2vz8_A Fatty acid synthase; tr 98.1 1.9E-06 6.4E-11 79.6 4.1 142 15-168 1240-1394(2512)
290 3s1s_A Restriction endonucleas 98.1 3E-05 1E-09 64.3 10.6 101 14-117 320-467 (878)
291 3p8z_A Mtase, non-structural p 98.1 1.6E-05 5.6E-10 56.3 7.8 103 4-113 69-184 (267)
292 3c6k_A Spermine synthase; sper 98.1 5.4E-06 1.8E-10 63.1 5.7 96 14-113 204-329 (381)
293 2uyo_A Hypothetical protein ML 98.0 1.1E-05 3.9E-10 60.0 6.7 145 15-164 102-274 (310)
294 1wg8_A Predicted S-adenosylmet 98.0 8.8E-06 3E-10 59.4 4.7 75 2-80 11-96 (285)
295 3lkz_A Non-structural protein 97.9 6.3E-05 2.1E-09 55.0 8.7 103 5-113 86-202 (321)
296 3lkd_A Type I restriction-modi 97.9 3.6E-05 1.2E-09 61.6 7.9 99 15-117 221-360 (542)
297 3khk_A Type I restriction-modi 97.9 3.8E-06 1.3E-10 67.3 1.5 97 17-116 246-396 (544)
298 3vyw_A MNMC2; tRNA wobble urid 97.7 0.00073 2.5E-08 50.0 11.7 123 16-173 97-252 (308)
299 3r24_A NSP16, 2'-O-methyl tran 97.6 0.0006 2.1E-08 50.0 9.3 94 13-116 107-218 (344)
300 2wk1_A NOVP; transferase, O-me 97.6 0.00034 1.2E-08 51.3 7.9 94 14-115 105-243 (282)
301 4fzv_A Putative methyltransfer 97.5 0.00053 1.8E-08 52.1 8.1 109 13-124 146-293 (359)
302 2zwa_A Leucine carboxyl methyl 97.4 0.0013 4.6E-08 54.2 10.3 148 15-169 107-309 (695)
303 1i4w_A Mitochondrial replicati 97.3 8.8E-05 3E-09 56.2 2.4 55 15-69 58-116 (353)
304 3tka_A Ribosomal RNA small sub 97.2 0.00049 1.7E-08 51.5 5.3 77 2-80 46-135 (347)
305 2zig_A TTHA0409, putative modi 97.0 0.0002 6.9E-09 53.0 1.5 41 14-56 234-275 (297)
306 3ufb_A Type I restriction-modi 96.5 0.0051 1.7E-07 49.2 6.5 101 13-116 215-363 (530)
307 3iht_A S-adenosyl-L-methionine 96.2 0.027 9.3E-07 37.2 7.4 56 14-69 39-94 (174)
308 1g60_A Adenine-specific methyl 95.4 0.0053 1.8E-07 44.4 1.7 39 14-54 211-250 (260)
309 3pvc_A TRNA 5-methylaminomethy 94.9 0.13 4.4E-06 42.3 8.6 119 15-168 58-232 (689)
310 3ps9_A TRNA 5-methylaminomethy 94.8 0.28 9.7E-06 40.2 10.2 89 16-104 67-211 (676)
311 3two_A Mannitol dehydrogenase; 94.7 0.054 1.8E-06 40.7 5.5 92 13-117 174-267 (348)
312 2dph_A Formaldehyde dismutase; 94.6 0.11 3.7E-06 39.8 7.0 97 13-117 183-301 (398)
313 3tos_A CALS11; methyltransfera 94.5 0.18 6.3E-06 36.3 7.6 95 14-115 68-217 (257)
314 3s2e_A Zinc-containing alcohol 94.3 0.17 6E-06 37.7 7.6 92 13-116 164-264 (340)
315 1g55_A DNA cytosine methyltran 94.3 0.44 1.5E-05 35.8 9.6 67 16-82 2-77 (343)
316 1f8f_A Benzyl alcohol dehydrog 94.1 0.13 4.5E-06 38.9 6.5 93 13-117 188-291 (371)
317 1pl8_A Human sorbitol dehydrog 94.1 0.25 8.7E-06 37.1 8.0 92 13-116 169-274 (356)
318 3uko_A Alcohol dehydrogenase c 94.1 0.52 1.8E-05 35.7 9.8 93 13-117 191-297 (378)
319 1pqw_A Polyketide synthase; ro 93.2 0.42 1.5E-05 32.4 7.3 91 13-116 36-138 (198)
320 4ej6_A Putative zinc-binding d 93.2 0.13 4.6E-06 38.9 5.1 94 13-118 180-287 (370)
321 3ggo_A Prephenate dehydrogenas 92.8 0.59 2E-05 34.6 8.0 88 17-113 34-125 (314)
322 2py6_A Methyltransferase FKBM; 92.7 0.18 6.3E-06 38.8 5.4 55 13-67 224-291 (409)
323 1zkd_A DUF185; NESG, RPR58, st 92.7 0.19 6.4E-06 38.5 5.2 39 14-52 79-124 (387)
324 4a2c_A Galactitol-1-phosphate 92.5 1.9 6.6E-05 31.9 10.7 95 13-118 158-263 (346)
325 1e3j_A NADP(H)-dependent ketos 92.5 1.1 3.6E-05 33.6 9.2 92 13-116 166-272 (352)
326 3qwb_A Probable quinone oxidor 92.4 1.1 3.7E-05 33.2 9.1 91 13-116 146-248 (334)
327 1kol_A Formaldehyde dehydrogen 91.9 0.82 2.8E-05 34.8 8.1 97 13-116 183-301 (398)
328 3fwz_A Inner membrane protein 91.7 1.7 5.7E-05 27.8 8.5 88 16-113 7-103 (140)
329 2oo3_A Protein involved in cat 91.7 0.35 1.2E-05 35.3 5.4 95 16-117 92-200 (283)
330 1uuf_A YAHK, zinc-type alcohol 91.6 0.28 9.6E-06 37.1 5.1 92 13-116 192-289 (369)
331 1e3i_A Alcohol dehydrogenase, 91.5 0.82 2.8E-05 34.5 7.6 92 13-116 193-298 (376)
332 3uog_A Alcohol dehydrogenase; 91.4 0.49 1.7E-05 35.6 6.3 92 13-117 187-289 (363)
333 3fpc_A NADP-dependent alcohol 91.4 0.39 1.3E-05 36.0 5.7 93 13-117 164-268 (352)
334 3jv7_A ADH-A; dehydrogenase, n 91.3 0.68 2.3E-05 34.5 7.0 94 13-117 169-272 (345)
335 1p0f_A NADP-dependent alcohol 91.2 0.75 2.6E-05 34.7 7.2 92 13-116 189-294 (373)
336 1rjw_A ADH-HT, alcohol dehydro 91.1 0.84 2.9E-05 34.0 7.2 92 13-116 162-262 (339)
337 1cdo_A Alcohol dehydrogenase; 91.0 1.3 4.5E-05 33.3 8.4 92 13-116 190-295 (374)
338 3g7u_A Cytosine-specific methy 90.9 2.4 8.1E-05 32.3 9.6 64 17-81 3-79 (376)
339 4eez_A Alcohol dehydrogenase 1 90.8 1.4 4.9E-05 32.7 8.3 93 13-116 161-264 (348)
340 3gms_A Putative NADPH:quinone 90.7 0.57 1.9E-05 34.9 6.0 92 13-117 142-245 (340)
341 2jhf_A Alcohol dehydrogenase E 90.7 1.7 5.8E-05 32.7 8.7 92 13-116 189-294 (374)
342 4b7c_A Probable oxidoreductase 90.5 1.1 3.6E-05 33.3 7.3 92 13-117 147-250 (336)
343 3goh_A Alcohol dehydrogenase, 90.2 0.23 8E-06 36.5 3.5 87 13-115 140-229 (315)
344 2j3h_A NADP-dependent oxidored 90.1 1.3 4.6E-05 32.8 7.6 91 13-116 153-256 (345)
345 3ip1_A Alcohol dehydrogenase, 90.0 1.7 6E-05 33.1 8.3 94 13-117 211-320 (404)
346 4dvj_A Putative zinc-dependent 89.7 1.2 4E-05 33.6 7.0 90 15-115 171-270 (363)
347 1vj0_A Alcohol dehydrogenase, 89.7 1 3.4E-05 34.1 6.7 93 13-117 193-300 (380)
348 2dq4_A L-threonine 3-dehydroge 89.6 2.6 8.9E-05 31.3 8.8 89 15-116 164-263 (343)
349 2g1u_A Hypothetical protein TM 89.6 2.9 0.0001 27.0 12.1 85 14-104 17-110 (155)
350 3m6i_A L-arabinitol 4-dehydrog 89.3 1.1 3.7E-05 33.6 6.6 93 13-117 177-285 (363)
351 2fzw_A Alcohol dehydrogenase c 89.2 1.4 4.8E-05 33.1 7.2 92 13-116 188-293 (373)
352 3mag_A VP39; methylated adenin 89.1 0.81 2.8E-05 33.5 5.4 52 14-65 59-114 (307)
353 1v3u_A Leukotriene B4 12- hydr 89.0 1.5 5.2E-05 32.4 7.1 91 13-116 143-245 (333)
354 2hcy_A Alcohol dehydrogenase 1 88.8 0.97 3.3E-05 33.7 6.0 90 13-116 167-270 (347)
355 3ubt_Y Modification methylase 88.8 5.4 0.00018 29.3 10.0 123 18-166 2-140 (331)
356 3qv2_A 5-cytosine DNA methyltr 88.6 1.3 4.5E-05 33.0 6.5 129 14-167 8-158 (327)
357 1iz0_A Quinone oxidoreductase; 88.6 0.42 1.4E-05 34.9 3.8 90 13-116 123-219 (302)
358 2c0c_A Zinc binding alcohol de 88.6 2.4 8.1E-05 31.8 8.0 92 13-117 161-263 (362)
359 1boo_A Protein (N-4 cytosine-s 88.3 0.16 5.4E-06 37.9 1.3 40 14-55 251-291 (323)
360 3b1f_A Putative prephenate deh 88.2 2.2 7.7E-05 30.7 7.5 88 17-113 7-98 (290)
361 3tqh_A Quinone oxidoreductase; 87.4 0.42 1.4E-05 35.3 3.2 90 13-115 150-245 (321)
362 2h6e_A ADH-4, D-arabinose 1-de 87.3 0.35 1.2E-05 36.1 2.7 91 15-116 170-270 (344)
363 1jvb_A NAD(H)-dependent alcoho 87.2 0.62 2.1E-05 34.8 4.0 93 13-116 168-272 (347)
364 4eye_A Probable oxidoreductase 87.2 1.3 4.4E-05 33.0 5.8 92 13-117 157-259 (342)
365 2eih_A Alcohol dehydrogenase; 87.2 1.6 5.4E-05 32.5 6.2 92 13-117 164-267 (343)
366 2d8a_A PH0655, probable L-thre 87.0 1.7 5.9E-05 32.3 6.4 90 15-116 167-268 (348)
367 3jyn_A Quinone oxidoreductase; 86.9 0.96 3.3E-05 33.4 4.9 92 13-117 138-241 (325)
368 1piw_A Hypothetical zinc-type 86.7 0.23 7.8E-06 37.4 1.4 94 13-116 177-277 (360)
369 1yb5_A Quinone oxidoreductase; 86.6 2.7 9.3E-05 31.4 7.3 90 13-115 168-269 (351)
370 1eg2_A Modification methylase 86.0 0.51 1.7E-05 35.1 3.0 33 14-48 241-273 (319)
371 2g5c_A Prephenate dehydrogenas 86.0 5.6 0.00019 28.5 8.5 82 18-104 3-88 (281)
372 2f1k_A Prephenate dehydrogenas 85.7 3.8 0.00013 29.3 7.5 84 18-113 2-88 (279)
373 1lss_A TRK system potassium up 85.7 4.7 0.00016 25.1 8.0 86 17-113 5-100 (140)
374 1yqd_A Sinapyl alcohol dehydro 85.5 2 6.8E-05 32.3 6.1 92 13-116 184-283 (366)
375 4hv4_A UDP-N-acetylmuramate--L 85.2 2.7 9.2E-05 33.2 6.9 126 14-162 20-150 (494)
376 3krt_A Crotonyl COA reductase; 84.6 3.1 0.00011 32.3 6.9 91 13-116 226-345 (456)
377 4dup_A Quinone oxidoreductase; 84.6 2.1 7.2E-05 32.0 5.8 91 13-116 165-266 (353)
378 3l4b_C TRKA K+ channel protien 84.5 3.6 0.00012 28.3 6.7 86 18-113 2-97 (218)
379 3l9w_A Glutathione-regulated p 84.5 5.6 0.00019 30.6 8.2 90 16-115 4-102 (413)
380 2cf5_A Atccad5, CAD, cinnamyl 84.5 1.2 4.1E-05 33.4 4.4 92 13-116 177-276 (357)
381 3fbg_A Putative arginate lyase 84.3 1.4 5E-05 32.7 4.8 88 15-114 150-247 (346)
382 2j8z_A Quinone oxidoreductase; 84.1 2.7 9.2E-05 31.4 6.2 91 13-116 160-262 (354)
383 2b5w_A Glucose dehydrogenase; 83.2 2.8 9.5E-05 31.3 6.0 86 17-117 174-275 (357)
384 1qor_A Quinone oxidoreductase; 82.9 2.1 7E-05 31.5 5.1 91 13-116 138-240 (327)
385 1wly_A CAAR, 2-haloacrylate re 82.1 3.7 0.00013 30.3 6.2 91 13-116 143-245 (333)
386 3ius_A Uncharacterized conserv 81.6 12 0.0004 26.5 9.7 93 17-115 6-102 (286)
387 2c7p_A Modification methylase 81.0 2.2 7.5E-05 31.8 4.6 62 16-80 11-78 (327)
388 4f3n_A Uncharacterized ACR, CO 80.9 0.85 2.9E-05 35.4 2.4 34 16-49 138-176 (432)
389 2hwk_A Helicase NSP2; rossman 80.5 3.5 0.00012 30.2 5.2 85 32-119 157-258 (320)
390 2zig_A TTHA0409, putative modi 80.4 3.2 0.00011 30.3 5.3 55 57-114 19-96 (297)
391 3tri_A Pyrroline-5-carboxylate 80.3 4.5 0.00015 29.2 6.0 89 17-115 4-97 (280)
392 1vpt_A VP39; RNA CAP, poly(A) 80.0 3.6 0.00012 30.6 5.3 51 15-65 75-129 (348)
393 3c24_A Putative oxidoreductase 79.8 4.7 0.00016 29.0 6.0 84 17-114 12-99 (286)
394 4a0s_A Octenoyl-COA reductase/ 79.7 5.4 0.00018 30.8 6.7 91 13-116 218-337 (447)
395 3gqv_A Enoyl reductase; medium 78.9 16 0.00053 27.4 8.8 90 14-115 163-263 (371)
396 3gaz_A Alcohol dehydrogenase s 78.7 7.1 0.00024 28.9 6.8 90 13-116 148-247 (343)
397 3c85_A Putative glutathione-re 77.4 13 0.00044 24.5 7.8 89 16-114 39-138 (183)
398 3d1l_A Putative NADP oxidoredu 76.8 10 0.00035 26.8 7.0 87 17-115 11-101 (266)
399 1ej6_A Lambda2; icosahedral, n 75.8 4.3 0.00015 35.2 5.2 104 14-121 820-931 (1289)
400 2vn8_A Reticulon-4-interacting 75.0 11 0.00037 28.3 7.0 92 13-115 181-280 (375)
401 2qrv_A DNA (cytosine-5)-methyl 75.0 5.5 0.00019 29.2 5.2 68 13-80 13-90 (295)
402 1xa0_A Putative NADPH dependen 74.6 4.7 0.00016 29.6 4.8 91 13-116 146-247 (328)
403 3dmg_A Probable ribosomal RNA 73.7 4.1 0.00014 31.0 4.4 92 15-117 45-141 (381)
404 2zb4_A Prostaglandin reductase 73.5 13 0.00046 27.5 7.2 92 13-117 156-262 (357)
405 1id1_A Putative potassium chan 73.4 15 0.00051 23.4 9.1 88 16-113 3-103 (153)
406 3nx4_A Putative oxidoreductase 73.2 6.4 0.00022 28.8 5.2 86 18-116 149-242 (324)
407 3me5_A Cytosine-specific methy 73.0 17 0.00059 28.6 7.8 53 16-69 88-145 (482)
408 4e12_A Diketoreductase; oxidor 72.8 6.4 0.00022 28.3 5.1 89 17-115 5-120 (283)
409 3ew7_A LMO0794 protein; Q8Y8U8 72.3 19 0.00066 24.1 8.4 94 18-115 2-102 (221)
410 2cdc_A Glucose dehydrogenase g 72.3 3.1 0.0001 31.2 3.3 88 16-116 181-279 (366)
411 3p2y_A Alanine dehydrogenase/p 72.0 2 7E-05 32.7 2.3 40 15-55 183-224 (381)
412 3slk_A Polyketide synthase ext 71.8 19 0.00065 30.3 8.2 89 13-115 343-442 (795)
413 3d4o_A Dipicolinate synthase s 71.8 16 0.00055 26.4 7.1 80 15-104 154-236 (293)
414 1bg6_A N-(1-D-carboxylethyl)-L 71.5 8.9 0.00031 28.3 5.8 88 17-115 5-108 (359)
415 4dio_A NAD(P) transhydrogenase 70.8 1.8 6.2E-05 33.3 1.8 40 15-55 189-230 (405)
416 2aef_A Calcium-gated potassium 70.6 23 0.00079 24.4 9.3 88 14-114 7-104 (234)
417 3eag_A UDP-N-acetylmuramate:L- 70.2 11 0.00038 27.8 6.0 126 15-163 3-137 (326)
418 3gg2_A Sugar dehydrogenase, UD 70.2 15 0.00052 28.5 6.9 93 17-116 3-122 (450)
419 3dfz_A SIRC, precorrin-2 dehyd 69.9 8.8 0.0003 26.8 5.0 65 14-80 29-98 (223)
420 2rir_A Dipicolinate synthase, 69.4 15 0.0005 26.7 6.4 80 15-104 156-238 (300)
421 3ged_A Short-chain dehydrogena 69.3 27 0.00093 24.7 7.9 64 17-82 3-84 (247)
422 1boo_A Protein (N-4 cytosine-s 68.6 10 0.00035 28.0 5.5 55 57-114 12-83 (323)
423 2ew2_A 2-dehydropantoate 2-red 68.5 16 0.00056 26.2 6.5 86 17-114 4-106 (316)
424 3pi7_A NADH oxidoreductase; gr 68.3 11 0.00037 28.0 5.6 87 17-116 166-264 (349)
425 3g17_A Similar to 2-dehydropan 68.3 19 0.00064 26.0 6.8 80 17-104 3-88 (294)
426 3iyl_W VP1; non-enveloped viru 67.2 13 0.00045 32.6 6.2 101 16-120 828-937 (1299)
427 1np3_A Ketol-acid reductoisome 66.7 5.4 0.00018 29.7 3.6 84 16-113 16-104 (338)
428 3ce6_A Adenosylhomocysteinase; 66.7 14 0.00047 29.3 6.0 89 13-115 271-361 (494)
429 1l7d_A Nicotinamide nucleotide 66.7 4 0.00014 31.0 2.9 34 15-49 171-205 (384)
430 4h0n_A DNMT2; SAH binding, tra 66.5 4.8 0.00016 30.0 3.3 64 17-80 4-76 (333)
431 1tt7_A YHFP; alcohol dehydroge 65.6 10 0.00035 27.8 4.9 91 13-116 147-248 (330)
432 4eso_A Putative oxidoreductase 65.3 23 0.00078 24.8 6.6 67 15-83 7-92 (255)
433 1x13_A NAD(P) transhydrogenase 63.8 3.5 0.00012 31.6 2.2 39 15-54 171-211 (401)
434 3gvp_A Adenosylhomocysteinase 63.1 19 0.00064 28.0 6.0 80 14-104 218-299 (435)
435 2vhw_A Alanine dehydrogenase; 62.7 4.5 0.00016 30.6 2.6 95 15-115 167-268 (377)
436 3g0o_A 3-hydroxyisobutyrate de 62.2 15 0.00052 26.6 5.3 86 16-113 7-99 (303)
437 1pjc_A Protein (L-alanine dehy 62.2 4.2 0.00014 30.6 2.3 94 16-115 167-267 (361)
438 4ezb_A Uncharacterized conserv 62.1 18 0.00061 26.5 5.7 82 17-113 25-118 (317)
439 4a27_A Synaptic vesicle membra 61.1 14 0.00048 27.3 5.0 91 13-116 140-239 (349)
440 3hwr_A 2-dehydropantoate 2-red 61.0 20 0.00068 26.2 5.8 82 14-104 17-112 (318)
441 3llv_A Exopolyphosphatase-rela 60.9 27 0.00093 21.7 8.4 62 16-80 6-77 (141)
442 4e21_A 6-phosphogluconate dehy 60.8 10 0.00035 28.5 4.2 87 15-114 21-113 (358)
443 3hn7_A UDP-N-acetylmuramate-L- 60.6 18 0.00062 28.7 5.8 126 15-163 18-151 (524)
444 1txg_A Glycerol-3-phosphate de 60.2 30 0.001 25.2 6.6 79 18-104 2-96 (335)
445 2cvz_A Dehydrogenase, 3-hydrox 60.0 14 0.00049 26.3 4.8 82 18-114 3-88 (289)
446 2eez_A Alanine dehydrogenase; 59.0 6.5 0.00022 29.6 2.9 94 16-115 166-266 (369)
447 2y0c_A BCEC, UDP-glucose dehyd 58.0 40 0.0014 26.4 7.2 94 15-115 7-127 (478)
448 3c7a_A Octopine dehydrogenase; 57.9 21 0.00073 27.0 5.6 35 71-114 80-114 (404)
449 4b79_A PA4098, probable short- 57.7 47 0.0016 23.4 9.8 65 15-82 10-87 (242)
450 3ghy_A Ketopantoate reductase 57.5 4.5 0.00015 30.0 1.7 79 17-104 4-96 (335)
451 1p3d_A UDP-N-acetylmuramate--a 56.8 67 0.0023 24.9 9.3 126 14-162 16-146 (475)
452 3gt0_A Pyrroline-5-carboxylate 56.8 1.5 5.2E-05 30.9 -0.9 89 17-115 3-96 (247)
453 4dcm_A Ribosomal RNA large sub 56.5 34 0.0012 25.8 6.4 93 15-117 38-138 (375)
454 1pjq_A CYSG, siroheme synthase 56.4 34 0.0012 26.6 6.6 65 15-80 11-79 (457)
455 3ic5_A Putative saccharopine d 56.0 29 0.00099 20.4 6.0 63 16-81 5-77 (118)
456 3vrd_B FCCB subunit, flavocyto 55.8 16 0.00054 27.5 4.6 33 16-48 2-36 (401)
457 4g65_A TRK system potassium up 55.7 33 0.0011 26.7 6.4 82 16-104 3-94 (461)
458 2pv7_A T-protein [includes: ch 55.6 22 0.00075 25.7 5.2 67 17-104 22-91 (298)
459 1lnq_A MTHK channels, potassiu 55.2 36 0.0012 24.9 6.4 86 16-114 115-210 (336)
460 3oig_A Enoyl-[acyl-carrier-pro 54.4 52 0.0018 22.9 9.1 98 15-117 6-149 (266)
461 1ks9_A KPA reductase;, 2-dehyd 54.2 36 0.0012 24.0 6.1 85 18-113 2-95 (291)
462 2o3j_A UDP-glucose 6-dehydroge 53.8 41 0.0014 26.3 6.7 93 17-114 10-133 (481)
463 3hn2_A 2-dehydropantoate 2-red 53.8 22 0.00077 25.8 5.0 86 17-113 3-101 (312)
464 3f9i_A 3-oxoacyl-[acyl-carrier 53.2 45 0.0015 22.9 6.4 68 14-83 12-94 (249)
465 1mv8_A GMD, GDP-mannose 6-dehy 52.9 32 0.0011 26.4 5.9 92 18-115 2-122 (436)
466 3qiv_A Short-chain dehydrogena 52.6 48 0.0016 22.9 6.5 67 15-83 8-96 (253)
467 3k96_A Glycerol-3-phosphate de 52.5 19 0.00067 26.9 4.5 87 16-114 29-131 (356)
468 4fgs_A Probable dehydrogenase 52.2 62 0.0021 23.2 7.2 97 15-116 28-160 (273)
469 3o26_A Salutaridine reductase; 52.1 33 0.0011 24.4 5.7 69 14-84 10-102 (311)
470 2f00_A UDP-N-acetylmuramate--L 51.9 83 0.0029 24.5 9.0 127 14-162 17-147 (491)
471 3e48_A Putative nucleoside-dip 51.2 61 0.0021 22.8 8.9 95 18-116 2-106 (289)
472 3imf_A Short chain dehydrogena 50.9 52 0.0018 22.9 6.4 65 16-82 6-92 (257)
473 3rht_A (gatase1)-like protein; 50.4 21 0.0007 25.6 4.1 39 70-115 47-86 (259)
474 3i83_A 2-dehydropantoate 2-red 50.0 30 0.001 25.3 5.1 85 17-113 3-103 (320)
475 3pxx_A Carveol dehydrogenase; 49.8 65 0.0022 22.7 9.0 67 15-83 9-109 (287)
476 2km1_A Protein DRE2; yeast, an 49.7 7.1 0.00024 25.1 1.5 37 72-113 58-96 (136)
477 4g81_D Putative hexonate dehyd 49.7 66 0.0023 22.8 7.1 67 15-83 8-96 (255)
478 3h2s_A Putative NADH-flavin re 49.4 56 0.0019 21.8 8.8 94 18-115 2-104 (224)
479 4fn4_A Short chain dehydrogena 49.2 68 0.0023 22.7 7.5 66 15-82 6-93 (254)
480 3pid_A UDP-glucose 6-dehydroge 48.7 57 0.0019 25.3 6.6 91 17-115 37-152 (432)
481 3rd5_A Mypaa.01249.C; ssgcid, 48.7 64 0.0022 22.9 6.7 67 15-83 15-96 (291)
482 4e5v_A Putative THUA-like prot 48.4 34 0.0011 24.8 5.1 40 70-116 55-94 (281)
483 4dll_A 2-hydroxy-3-oxopropiona 48.1 48 0.0016 24.2 6.0 86 16-114 31-122 (320)
484 3cea_A MYO-inositol 2-dehydrog 47.8 49 0.0017 24.2 6.1 89 15-115 7-101 (346)
485 3tpc_A Short chain alcohol deh 47.3 68 0.0023 22.2 8.5 66 16-83 7-91 (257)
486 3mog_A Probable 3-hydroxybutyr 47.0 53 0.0018 25.8 6.3 88 17-116 6-120 (483)
487 4a7p_A UDP-glucose dehydrogena 46.9 98 0.0033 24.0 7.8 95 15-116 7-129 (446)
488 3cky_A 2-hydroxymethyl glutara 46.9 40 0.0014 24.1 5.4 87 16-114 4-96 (301)
489 2qyt_A 2-dehydropantoate 2-red 45.7 20 0.00068 25.9 3.6 89 17-114 9-115 (317)
490 4id9_A Short-chain dehydrogena 45.5 84 0.0029 22.7 7.3 66 15-87 18-91 (347)
491 3rkr_A Short chain oxidoreduct 44.7 68 0.0023 22.3 6.2 66 16-83 29-116 (262)
492 2q3e_A UDP-glucose 6-dehydroge 44.5 78 0.0027 24.6 7.0 38 17-54 6-46 (467)
493 3ijr_A Oxidoreductase, short c 44.2 84 0.0029 22.4 8.5 95 16-115 47-182 (291)
494 1j6u_A UDP-N-acetylmuramate-al 44.1 57 0.002 25.3 6.1 118 24-164 21-144 (469)
495 3qha_A Putative oxidoreductase 43.9 41 0.0014 24.2 5.0 85 16-114 15-103 (296)
496 3tjr_A Short chain dehydrogena 43.8 87 0.003 22.4 6.9 67 15-83 30-118 (301)
497 3n74_A 3-ketoacyl-(acyl-carrie 43.6 78 0.0027 21.9 7.5 67 15-83 8-93 (261)
498 3ktd_A Prephenate dehydrogenas 43.5 26 0.00088 26.2 3.9 79 16-104 8-93 (341)
499 3sju_A Keto reductase; short-c 43.3 85 0.0029 22.2 7.4 68 14-83 22-111 (279)
500 2dpo_A L-gulonate 3-dehydrogen 42.8 33 0.0011 25.3 4.4 89 16-115 6-122 (319)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.95 E-value=6.1e-28 Score=184.13 Aligned_cols=169 Identities=27% Similarity=0.496 Sum_probs=143.7
Q ss_pred cccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC------CCCeeEEecCCcc-cCCCccE
Q 030291 4 LLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ------TDNLKYIEGDMFQ-FIPPSDA 76 (180)
Q Consensus 4 ~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~------~~~~~~~~~d~~~-~~~~~D~ 76 (180)
.+++.++ +.+..+|+|||||+|.++..+++.+|+.+++.+|++++++.+++ ..|+++..+|+++ +.+.+|+
T Consensus 170 ~~~~~~~--~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~~~D~ 247 (353)
T 4a6d_A 170 SVLTAFD--LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADL 247 (353)
T ss_dssp HHHHSSC--GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTSCCCCCSE
T ss_pred HHHHhcC--cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceeeecCccccCCCCCceE
Confidence 4556666 77888999999999999999999999999999999887776653 5789999999986 4567999
Q ss_pred EEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHH
Q 030291 77 FFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLF 156 (180)
Q Consensus 77 v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 156 (180)
+++..++|+++|++..++|++++++|+| ||++++.|...++..... ......++.++...+++.+|.++|.+++
T Consensus 248 ~~~~~vlh~~~d~~~~~iL~~~~~al~p---gg~lli~e~~~~~~~~~~---~~~~~~dl~ml~~~~g~ert~~e~~~ll 321 (353)
T 4a6d_A 248 YILARVLHDWADGKCSHLLERIYHTCKP---GGGILVIESLLDEDRRGP---LLTQLYSLNMLVQTEGQERTPTHYHMLL 321 (353)
T ss_dssp EEEESSGGGSCHHHHHHHHHHHHHHCCT---TCEEEEEECCCCTTSCCC---HHHHHHHHHHHHSSSCCCCCHHHHHHHH
T ss_pred EEeeeecccCCHHHHHHHHHHHHhhCCC---CCEEEEEEeeeCCCCCCC---HHHHHHHHHHHHhCCCcCCCHHHHHHHH
Confidence 9999999999999999999999999999 999999998876544322 1223345555555677899999999999
Q ss_pred HHcCCeEEEEeecCCceeEEEEeC
Q 030291 157 VNAGFTHYKIAPIFGIKSLIEVYP 180 (180)
Q Consensus 157 ~~aGf~~~~~~~~~~~~~~~~~~~ 180 (180)
+++||+.++++..++..++|+++|
T Consensus 322 ~~AGf~~v~v~~~~~~~~~i~ArK 345 (353)
T 4a6d_A 322 SSAGFRDFQFKKTGAIYDAILARK 345 (353)
T ss_dssp HHHTCEEEEEECCSSSCEEEEEEC
T ss_pred HHCCCceEEEEEcCCceEEEEEEe
Confidence 999999999999999999999886
No 2
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.95 E-value=3.9e-26 Score=174.81 Aligned_cols=165 Identities=35% Similarity=0.631 Sum_probs=138.9
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCCCCCeeEEecCCcccCCCccEEEeccccccCChHHHH
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDDEDCL 92 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~~~~~ 92 (180)
+.+..+|||||||+|.++..+++.+|+.+++++|++.+++.+++..++++..+|+.++.|..|+|++..++|++++++..
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~D~~~~~p~~D~v~~~~vlh~~~d~~~~ 278 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFKEVPSGDTILMKWILHDWSDQHCA 278 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHH
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhhcCCeEEEeCCcCCCCCCCCEEEehHHhccCCHHHHH
Confidence 56778999999999999999999999999999999779999988889999999998766656999999999999999888
Q ss_pred HHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEe-ecCCcccCHHHHHHHHHHcCCeEEEEeecCC
Q 030291 93 KLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNF-NVGGKERTEQEWGSLFVNAGFTHYKIAPIFG 171 (180)
Q Consensus 93 ~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~ 171 (180)
++|++++++|+| ||++++.+...++..............+..+.. ..+++.++.++|.++++++||+.+++....+
T Consensus 279 ~~L~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~~~~ 355 (364)
T 3p9c_A 279 TLLKNCYDALPA---HGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTYIYA 355 (364)
T ss_dssp HHHHHHHHHSCT---TCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEEEEEEET
T ss_pred HHHHHHHHHcCC---CCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEEEEEcCC
Confidence 999999999999 999999998876543322111122233433332 2456788999999999999999999999999
Q ss_pred ceeEEEEeC
Q 030291 172 IKSLIEVYP 180 (180)
Q Consensus 172 ~~~~~~~~~ 180 (180)
..++|+++|
T Consensus 356 ~~~vie~~k 364 (364)
T 3p9c_A 356 NAWAIEFTK 364 (364)
T ss_dssp TEEEEEEEC
T ss_pred ceEEEEEeC
Confidence 999999987
No 3
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.94 E-value=5.2e-26 Score=174.38 Aligned_cols=172 Identities=37% Similarity=0.631 Sum_probs=140.9
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCCCCCeeEEecCCcccCCCccEEEeccccc
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFH 84 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~ 84 (180)
+++.++ .+.+..+|||||||+|.++..+++.+|+.+++++|++.+++.+++..++++..+|+.++.|..|+|++..++|
T Consensus 194 ~~~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p~~D~v~~~~vlh 272 (368)
T 3reo_A 194 ILEMYN-GFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGDAIFIKWICH 272 (368)
T ss_dssp HHTTCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTTCCCCCSEEEEESCGG
T ss_pred HHHhcc-cccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhhcCCCEEEecCCCCCCCCCCEEEEechhh
Confidence 344443 2567789999999999999999999999999999997799999888899999999987666569999999999
Q ss_pred cCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEee-cCCcccCHHHHHHHHHHcCCeE
Q 030291 85 FFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFN-VGGKERTEQEWGSLFVNAGFTH 163 (180)
Q Consensus 85 ~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~aGf~~ 163 (180)
++++++..++|++++++|+| ||++++.+...++..............+..+... .+++.++.++|.++++++||++
T Consensus 273 ~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~ 349 (368)
T 3reo_A 273 DWSDEHCLKLLKNCYAALPD---HGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRG 349 (368)
T ss_dssp GBCHHHHHHHHHHHHHHSCT---TCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCE
T ss_pred cCCHHHHHHHHHHHHHHcCC---CCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCee
Confidence 99999888999999999999 9999999988765443221112222333333322 3567889999999999999999
Q ss_pred EEEeecCCceeEEEEeC
Q 030291 164 YKIAPIFGIKSLIEVYP 180 (180)
Q Consensus 164 ~~~~~~~~~~~~~~~~~ 180 (180)
+++....+..++++++|
T Consensus 350 v~~~~~~~~~~vie~~k 366 (368)
T 3reo_A 350 FKVASCAFNTYVMEFLK 366 (368)
T ss_dssp EEEEEEETTEEEEEEEC
T ss_pred eEEEEeCCCcEEEEEEe
Confidence 99999989899999986
No 4
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.94 E-value=4.3e-26 Score=173.69 Aligned_cols=168 Identities=29% Similarity=0.533 Sum_probs=136.7
Q ss_pred cccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC-----CCCeeEEecCCcccCCCccEEE
Q 030291 4 LLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ-----TDNLKYIEGDMFQFIPPSDAFF 78 (180)
Q Consensus 4 ~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-----~~~~~~~~~d~~~~~~~~D~v~ 78 (180)
.+++.++ +++..+|||||||+|..+..+++.+|+.+++++|++.++...+. ..++++..+|+.++.|.||+|+
T Consensus 175 ~~~~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~p~~D~v~ 252 (348)
T 3lst_A 175 ILARAGD--FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVPHADVHV 252 (348)
T ss_dssp HHHHHSC--CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTTTCCCCCSEEE
T ss_pred HHHHhCC--ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEEEecCCCCCCCCCcEEE
Confidence 4556666 77889999999999999999999999999999999775543321 4689999999976666999999
Q ss_pred eccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHH
Q 030291 79 FKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVN 158 (180)
Q Consensus 79 ~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 158 (180)
+..++|++++++..++|++++++||| ||.+++.+...+...... .....+..+....+++.++.++|.+++++
T Consensus 253 ~~~vlh~~~d~~~~~~L~~~~~~Lkp---gG~l~i~e~~~~~~~~~~----~~~~~d~~~~~~~~~~~~t~~e~~~ll~~ 325 (348)
T 3lst_A 253 LKRILHNWGDEDSVRILTNCRRVMPA---HGRVLVIDAVVPEGNDAH----QSKEMDFMMLAARTGQERTAAELEPLFTA 325 (348)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHTCCT---TCEEEEEECCBCSSSSCC----HHHHHHHHHHHTTSCCCCBHHHHHHHHHH
T ss_pred EehhccCCCHHHHHHHHHHHHHhcCC---CCEEEEEEeccCCCCCcc----hhhhcChhhhhcCCCcCCCHHHHHHHHHH
Confidence 99999999999878999999999999 999999998766543221 11122222222345678899999999999
Q ss_pred cCCeEEEEeecCCceeEEEEeC
Q 030291 159 AGFTHYKIAPIFGIKSLIEVYP 180 (180)
Q Consensus 159 aGf~~~~~~~~~~~~~~~~~~~ 180 (180)
+||+++++....+..++++++|
T Consensus 326 aGf~~~~~~~~~~~~~vie~~p 347 (348)
T 3lst_A 326 AGLRLDRVVGTSSVMSIAVGVP 347 (348)
T ss_dssp TTEEEEEEEECSSSCEEEEEEE
T ss_pred CCCceEEEEECCCCcEEEEEEe
Confidence 9999999999888899999876
No 5
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.94 E-value=1.6e-25 Score=170.81 Aligned_cols=167 Identities=54% Similarity=1.026 Sum_probs=135.6
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCCCCCeeEEecCCcccCCCccEEEeccccccCChHHHH
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDDEDCL 92 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~~~~~ 92 (180)
+++..+|||||||+|.++..+++.+|+.+++++|++.+++.+++..++++..+|+.++.|.||+|++..++||++++...
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p~~D~v~~~~~lh~~~d~~~~ 265 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCL 265 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCBTTEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHH
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhcccCCCcEEEeccccCCCCCccEEEeehhhccCCHHHHH
Confidence 66789999999999999999999999999999999669999987677999999997777779999999999999999888
Q ss_pred HHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEEEEeecCCc
Q 030291 93 KLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHYKIAPIFGI 172 (180)
Q Consensus 93 ~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~ 172 (180)
++|++++++|+|.++||.+++.+...+...............+..+.. .+++.++.++|.++++++||+++++...++.
T Consensus 266 ~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~ 344 (352)
T 1fp2_A 266 RILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMAC-LNGKERNEEEWKKLFIEAGFQHYKISPLTGF 344 (352)
T ss_dssp HHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGG-GTCCCEEHHHHHHHHHHTTCCEEEEEEEETT
T ss_pred HHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHh-ccCCCCCHHHHHHHHHHCCCCeeEEEecCCC
Confidence 999999999998323699999998876543321011111222222222 2356689999999999999999999988888
Q ss_pred eeEEEEeC
Q 030291 173 KSLIEVYP 180 (180)
Q Consensus 173 ~~~~~~~~ 180 (180)
.++|+++|
T Consensus 345 ~~vie~~~ 352 (352)
T 1fp2_A 345 LSLIEIYP 352 (352)
T ss_dssp EEEEEEEC
T ss_pred cEEEEEeC
Confidence 99999987
No 6
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.94 E-value=8.3e-26 Score=171.07 Aligned_cols=165 Identities=29% Similarity=0.474 Sum_probs=136.0
Q ss_pred ccccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC-------CCCeeEEecCCcccCC-Cc
Q 030291 3 TLLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ-------TDNLKYIEGDMFQFIP-PS 74 (180)
Q Consensus 3 ~~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-------~~~~~~~~~d~~~~~~-~~ 74 (180)
..+++.++ +++..+|||||||+|..+..+++.+|+.+++++|++.+++.+++ ..++++..+|+.++.| .|
T Consensus 159 ~~~~~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~ 236 (332)
T 3i53_A 159 TGIAAKYD--WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGA 236 (332)
T ss_dssp TTGGGSSC--CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSC
T ss_pred HHHHHhCC--CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCC
Confidence 34566666 67789999999999999999999999999999999668888764 3789999999987666 79
Q ss_pred cEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHH
Q 030291 75 DAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGS 154 (180)
Q Consensus 75 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (180)
|+|++..++||+++++..++|++++++|+| ||.+++.+...+.. ... ...+..+....+++.++.++|.+
T Consensus 237 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~-~~~------~~~d~~~~~~~~~~~~t~~e~~~ 306 (332)
T 3i53_A 237 GGYVLSAVLHDWDDLSAVAILRRCAEAAGS---GGVVLVIEAVAGDE-HAG------TGMDLRMLTYFGGKERSLAELGE 306 (332)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHHTT---TCEEEEEECCCC----CC------HHHHHHHHHHHSCCCCCHHHHHH
T ss_pred cEEEEehhhccCCHHHHHHHHHHHHHhcCC---CCEEEEEeecCCCC-Ccc------HHHHHHHHhhCCCCCCCHHHHHH
Confidence 999999999999999888999999999999 99999999876654 111 12222222334567889999999
Q ss_pred HHHHcCCeEEEEeecCCceeEEEEeC
Q 030291 155 LFVNAGFTHYKIAPIFGIKSLIEVYP 180 (180)
Q Consensus 155 ~l~~aGf~~~~~~~~~~~~~~~~~~~ 180 (180)
+++++||+++++....+ .+++++++
T Consensus 307 ll~~aGf~~~~~~~~~~-~~vie~r~ 331 (332)
T 3i53_A 307 LAAQAGLAVRAAHPISY-VSIVEMTA 331 (332)
T ss_dssp HHHHTTEEEEEEEECSS-SEEEEEEE
T ss_pred HHHHCCCEEEEEEECCC-cEEEEEee
Confidence 99999999999999888 89998864
No 7
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.94 E-value=1.8e-25 Score=170.88 Aligned_cols=176 Identities=52% Similarity=0.905 Sum_probs=139.7
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCCCCCeeEEecCCcccCCCccEEEeccccc
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFH 84 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~ 84 (180)
+++.+++.+.+..+|||||||+|.++..+++.+|+.+++++|++.+++.+++..++++..+|+.++.|.||+|++..++|
T Consensus 183 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~~vlh 262 (358)
T 1zg3_A 183 VLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWVLH 262 (358)
T ss_dssp HHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCCCSSEEEEECCTTTCCCCCSEEEEESCGG
T ss_pred HHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhcccCCCcEEEeCccCCCCCCceEEEEccccc
Confidence 34445212567789999999999999999999999999999997799888876779999999987777899999999999
Q ss_pred cCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEE
Q 030291 85 FFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHY 164 (180)
Q Consensus 85 ~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 164 (180)
+++++...++|++++++|+|.++||.+++.+...+...............+..+....+++.++.++|.++++++||+++
T Consensus 263 ~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~ 342 (358)
T 1zg3_A 263 DWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSY 342 (358)
T ss_dssp GSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEE
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCee
Confidence 99999888999999999998211588999998876543321011122223332222345677899999999999999999
Q ss_pred EEeecCCceeEEEEeC
Q 030291 165 KIAPIFGIKSLIEVYP 180 (180)
Q Consensus 165 ~~~~~~~~~~~~~~~~ 180 (180)
++....+..++|+++|
T Consensus 343 ~~~~~~~~~~vie~~~ 358 (358)
T 1zg3_A 343 KITPISGFKSLIEVYP 358 (358)
T ss_dssp EEEEETTTEEEEEEEC
T ss_pred EEEecCCCcEEEEEeC
Confidence 9999888889999987
No 8
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.93 E-value=1e-25 Score=172.82 Aligned_cols=167 Identities=30% Similarity=0.611 Sum_probs=139.8
Q ss_pred cccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC-------CCCeeEEecCCcccCC-Ccc
Q 030291 4 LLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ-------TDNLKYIEGDMFQFIP-PSD 75 (180)
Q Consensus 4 ~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-------~~~~~~~~~d~~~~~~-~~D 75 (180)
.+++.++ +++..+|||||||+|.++..+++.+|+.+++++|++.+++.+++ ..++++..+|+.++.| .||
T Consensus 193 ~l~~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~~~D 270 (369)
T 3gwz_A 193 QVAAAYD--FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFFETIPDGAD 270 (369)
T ss_dssp HHHHHSC--CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCSSCS
T ss_pred HHHHhCC--CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCCCCCCce
Confidence 3555666 67889999999999999999999999999999999658887764 4689999999987666 699
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHH
Q 030291 76 AFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSL 155 (180)
Q Consensus 76 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (180)
+|++..++|+++++...++|++++++|+| ||.+++.+...+...... ....+..+....+++.++.++|.++
T Consensus 271 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~p---gG~l~i~e~~~~~~~~~~-----~~~~d~~~~~~~~g~~~t~~e~~~l 342 (369)
T 3gwz_A 271 VYLIKHVLHDWDDDDVVRILRRIATAMKP---DSRLLVIDNLIDERPAAS-----TLFVDLLLLVLVGGAERSESEFAAL 342 (369)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHTTCCT---TCEEEEEEEBCCSSCCHH-----HHHHHHHHHHHHSCCCBCHHHHHHH
T ss_pred EEEhhhhhccCCHHHHHHHHHHHHHHcCC---CCEEEEEEeccCCCCCCc-----hhHhhHHHHhhcCCccCCHHHHHHH
Confidence 99999999999999888899999999999 999999998876653321 2233333333356688999999999
Q ss_pred HHHcCCeEEEEee-cCCceeEEEEeC
Q 030291 156 FVNAGFTHYKIAP-IFGIKSLIEVYP 180 (180)
Q Consensus 156 l~~aGf~~~~~~~-~~~~~~~~~~~~ 180 (180)
++++||+++++.. ..+..++|+++|
T Consensus 343 l~~aGf~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 343 LEKSGLRVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp HHTTTEEEEEEEECSSSSEEEEEEEE
T ss_pred HHHCCCeEEEEEECCCCCcEEEEEEe
Confidence 9999999999998 678899999876
No 9
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.93 E-value=9.8e-25 Score=167.56 Aligned_cols=165 Identities=33% Similarity=0.685 Sum_probs=133.0
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCCCCCeeEEecCCcccCCCccEEEeccccccCChHHHH
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDDEDCL 92 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~~~~~ 92 (180)
+++..+|||||||+|.++..+++.+|..+++++|++.+++.+++..++++..+|+.++.|.+|+|++..++||++++...
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~~~lh~~~d~~~~ 286 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCI 286 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTTCCCCEEEEEEESSGGGSCHHHHH
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHhhhhcCCCEEEeCCcccCCCCCCEEEEecccccCCHHHHH
Confidence 56778999999999999999999999999999999669999888778999999997766679999999999999999888
Q ss_pred HHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEEEEee-cCC
Q 030291 93 KLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHYKIAP-IFG 171 (180)
Q Consensus 93 ~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~-~~~ 171 (180)
.+|++++++|+| ||.+++.+...+...............+..+....+++.++.++|.++++++||+++++.. ..+
T Consensus 287 ~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~ 363 (372)
T 1fp1_D 287 EFLSNCHKALSP---NGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVACRAFN 363 (372)
T ss_dssp HHHHHHHHHEEE---EEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEEEEEETT
T ss_pred HHHHHHHHhcCC---CCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEEEEEcCCC
Confidence 999999999999 9999999987765432210000112222222212345678999999999999999999888 455
Q ss_pred ceeEEEEeC
Q 030291 172 IKSLIEVYP 180 (180)
Q Consensus 172 ~~~~~~~~~ 180 (180)
..++|+++|
T Consensus 364 ~~~vie~~~ 372 (372)
T 1fp1_D 364 SLGVMEFYK 372 (372)
T ss_dssp TEEEEEEEC
T ss_pred CeEEEEEeC
Confidence 249999887
No 10
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.92 E-value=2e-24 Score=158.27 Aligned_cols=165 Identities=17% Similarity=0.182 Sum_probs=122.7
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHC--CCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcc-cCCCccEEEecc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAF--PGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQ-FIPPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~--~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~-~~~~~D~v~~~~ 81 (180)
++++.+|||||||+|..+..+++.. ++++++++|+++ |++.|++ ..++++.++|+.+ +.+++|+|+++.
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~ 147 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNF 147 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEES
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeee
Confidence 5788999999999999999999875 578999999976 9998864 4589999999966 556799999999
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhh-hhhhhccc-eeeEe-----------ecCCcccC
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDREL-TESKLLFD-IFMNF-----------NVGGKERT 148 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~-----------~~~~~~~~ 148 (180)
++||++++++..+|++++++||| ||.+++.+............ ......+. ..... .......+
T Consensus 148 ~l~~~~~~~~~~~l~~i~~~Lkp---GG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s 224 (261)
T 4gek_A 148 TLQFLEPSERQALLDKIYQGLNP---GGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDS 224 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBC
T ss_pred eeeecCchhHhHHHHHHHHHcCC---CcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCC
Confidence 99999998888899999999999 99999998876544322111 00000000 00000 00013468
Q ss_pred HHHHHHHHHHcCCeEEEEeec-CCceeEEEEeC
Q 030291 149 EQEWGSLFVNAGFTHYKIAPI-FGIKSLIEVYP 180 (180)
Q Consensus 149 ~~~~~~~l~~aGf~~~~~~~~-~~~~~~~~~~~ 180 (180)
.+++.++|+++||+.++++.. ..+.++++.+|
T Consensus 225 ~~~~~~~L~~AGF~~ve~~fq~~nF~~~iA~K~ 257 (261)
T 4gek_A 225 VETHKARLHKAGFEHSELWFQCFNFGSLVALKA 257 (261)
T ss_dssp HHHHHHHHHHHTCSEEEEEEEETTEEEEEEECC
T ss_pred HHHHHHHHHHcCCCeEEEEEEeccEEEEEEEEc
Confidence 899999999999999988643 45666666553
No 11
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.92 E-value=2e-24 Score=163.53 Aligned_cols=167 Identities=28% Similarity=0.496 Sum_probs=134.0
Q ss_pred cccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC-------CCCeeEEecCCcccCC-Ccc
Q 030291 4 LLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ-------TDNLKYIEGDMFQFIP-PSD 75 (180)
Q Consensus 4 ~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-------~~~~~~~~~d~~~~~~-~~D 75 (180)
.+++.++ +++ .+|||||||+|..+..+++.+|+.+++++|++.+++.+++ ..++++..+|+.++.+ .||
T Consensus 159 ~~~~~~~--~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D 235 (334)
T 2ip2_A 159 EIPRLLD--FRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGD 235 (334)
T ss_dssp HHHHHSC--CTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTCCCSSCS
T ss_pred HHHHhCC--CCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCCCCCCCC
Confidence 3445555 556 8999999999999999999999999999999558877764 3689999999977555 599
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHH
Q 030291 76 AFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSL 155 (180)
Q Consensus 76 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (180)
+|++..++|+++++....++++++++|+| ||.+++.+...++..... .....+..+....+++.++.++|.++
T Consensus 236 ~v~~~~vl~~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~----~~~~~~~~~~~~~~~~~~t~~e~~~l 308 (334)
T 2ip2_A 236 IYLLSRIIGDLDEAASLRLLGNCREAMAG---DGRVVVIERTISASEPSP----MSVLWDVHLFMACAGRHRTTEEVVDL 308 (334)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHHHSCT---TCEEEEEECCBCSSSCCH----HHHHHHHHHHHHHSCCCCBHHHHHHH
T ss_pred EEEEchhccCCCHHHHHHHHHHHHHhcCC---CCEEEEEEeccCCCCCcc----hhHHhhhHhHhhCCCcCCCHHHHHHH
Confidence 99999999999999888999999999999 999999998765543211 11122222222234567899999999
Q ss_pred HHHcCCeEEEEeecCCceeEEEEeC
Q 030291 156 FVNAGFTHYKIAPIFGIKSLIEVYP 180 (180)
Q Consensus 156 l~~aGf~~~~~~~~~~~~~~~~~~~ 180 (180)
++++||+++++...++..++|+++|
T Consensus 309 l~~aGf~~~~~~~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 309 LGRGGFAVERIVDLPMETRMIVAAR 333 (334)
T ss_dssp HHHTTEEEEEEEEETTTEEEEEEEE
T ss_pred HHHCCCceeEEEECCCCCEEEEEEe
Confidence 9999999999998888889998875
No 12
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.91 E-value=5.2e-24 Score=163.04 Aligned_cols=164 Identities=18% Similarity=0.310 Sum_probs=129.8
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC-------CCCeeEEecCCccc---CC-CccEEEeccc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ-------TDNLKYIEGDMFQF---IP-PSDAFFFKTV 82 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-------~~~~~~~~~d~~~~---~~-~~D~v~~~~~ 82 (180)
.+..+|||||||+|.++..+++.+|+.+++++|++.+++.+++ ..++++..+|+.+. .| .||+|++..+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~v 257 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQF 257 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEESC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEech
Confidence 5678999999999999999999999999999999668877764 25799999999774 45 6999999999
Q ss_pred cccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhh-hhhhccceeeEeecCCcccCHHHHHHHHHHcCC
Q 030291 83 FHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELT-ESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGF 161 (180)
Q Consensus 83 l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 161 (180)
+|++++++..++|++++++|+| ||.+++.+...+......... ......+..+....+++.++.++|.++++++||
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf 334 (363)
T 3dp7_A 258 LDCFSEEEVISILTRVAQSIGK---DSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGL 334 (363)
T ss_dssp STTSCHHHHHHHHHHHHHHCCT---TCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTE
T ss_pred hhhCCHHHHHHHHHHHHHhcCC---CcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCC
Confidence 9999999888999999999999 999999998776554322110 001111111222344577899999999999999
Q ss_pred eEEEEeecCC-ceeEEEEeC
Q 030291 162 THYKIAPIFG-IKSLIEVYP 180 (180)
Q Consensus 162 ~~~~~~~~~~-~~~~~~~~~ 180 (180)
+++++....+ ..++++++|
T Consensus 335 ~~v~~~~~~g~~~svi~~~~ 354 (363)
T 3dp7_A 335 EVEEIQDNIGLGHSILQCRL 354 (363)
T ss_dssp EESCCCCCBTTTBEEEEEEE
T ss_pred eEEEEEeCCCCCceEEEEee
Confidence 9999986654 488888764
No 13
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.91 E-value=5.9e-24 Score=163.21 Aligned_cols=168 Identities=26% Similarity=0.419 Sum_probs=129.5
Q ss_pred cccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC-------CCCeeEEecCCcccCCC-cc
Q 030291 4 LLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ-------TDNLKYIEGDMFQFIPP-SD 75 (180)
Q Consensus 4 ~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-------~~~~~~~~~d~~~~~~~-~D 75 (180)
.+++.++ +++..+|||||||+|.++..+++.+|+.+++++|++.+++.+++ ..++++..+|+.++.+. ||
T Consensus 173 ~~~~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D 250 (374)
T 1qzz_A 173 APADAYD--WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTAD 250 (374)
T ss_dssp HHHHTSC--CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEE
T ss_pred HHHHhCC--CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCCCCC
Confidence 3455555 67789999999999999999999999999999999548887764 24899999999765554 99
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe--eeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHH
Q 030291 76 AFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI--VIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWG 153 (180)
Q Consensus 76 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (180)
+|++..++||++++....++++++++|+| ||.+++.+. ..+..... ......+..+....+++.++.++|.
T Consensus 251 ~v~~~~vl~~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (374)
T 1qzz_A 251 VVLLSFVLLNWSDEDALTILRGCVRALEP---GGRLLVLDRADVEGDGADR----FFSTLLDLRMLTFMGGRVRTRDEVV 323 (374)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEECCH-------H----HHHHHHHHHHHHHHSCCCCCHHHHH
T ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcCC---CcEEEEEechhhcCCCCCc----chhhhcchHHHHhCCCcCCCHHHHH
Confidence 99999999999999878899999999999 999999987 54332211 1111222222222345778999999
Q ss_pred HHHHHcCCeEEEEeecCCce-----eEEEEeC
Q 030291 154 SLFVNAGFTHYKIAPIFGIK-----SLIEVYP 180 (180)
Q Consensus 154 ~~l~~aGf~~~~~~~~~~~~-----~~~~~~~ 180 (180)
++++++||+++++....+.. ++++++|
T Consensus 324 ~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (374)
T 1qzz_A 324 DLAGSAGLALASERTSGSTTLPFDFSILEFTA 355 (374)
T ss_dssp HHHHTTTEEEEEEEEECCSSCSSCEEEEEEEE
T ss_pred HHHHHCCCceEEEEECCCCcccCCcEEEEEEE
Confidence 99999999999999887766 7887753
No 14
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.91 E-value=8.6e-24 Score=161.57 Aligned_cols=167 Identities=28% Similarity=0.517 Sum_probs=130.9
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC-------CCCeeEEecCCcccCC-CccE
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ-------TDNLKYIEGDMFQFIP-PSDA 76 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-------~~~~~~~~~d~~~~~~-~~D~ 76 (180)
+++.++ +++..+|||||||+|.++..+++.+|+.+++++|++.+++.+++ ..++++..+|+.++.+ .||+
T Consensus 175 l~~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~ 252 (360)
T 1tw3_A 175 PAAAYD--WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADA 252 (360)
T ss_dssp HHHHSC--CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEE
T ss_pred HHHhCC--CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCCCccE
Confidence 445555 67788999999999999999999999999999999557777764 2489999999977555 4999
Q ss_pred EEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee-eCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHH
Q 030291 77 FFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV-IDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSL 155 (180)
Q Consensus 77 v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (180)
|++..++|+++++....++++++++|+| ||.+++.+.. .++..... .....+..+....+++.++.++|.++
T Consensus 253 v~~~~vl~~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~t~~e~~~l 325 (360)
T 1tw3_A 253 IILSFVLLNWPDHDAVRILTRCAEALEP---GGRILIHERDDLHENSFNE----QFTELDLRMLVFLGGALRTREKWDGL 325 (360)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEE---EEEEEEEECCBCGGGCCSH----HHHHHHHHHHHHHSCCCCBHHHHHHH
T ss_pred EEEcccccCCCHHHHHHHHHHHHHhcCC---CcEEEEEEEeccCCCCCcc----hhhhccHHHhhhcCCcCCCHHHHHHH
Confidence 9999999999998877899999999999 9999999877 44322111 11112222222234577899999999
Q ss_pred HHHcCCeEEEEeecCCc-----eeEEEEeC
Q 030291 156 FVNAGFTHYKIAPIFGI-----KSLIEVYP 180 (180)
Q Consensus 156 l~~aGf~~~~~~~~~~~-----~~~~~~~~ 180 (180)
++++||+++++....+. .++++++|
T Consensus 326 l~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (360)
T 1tw3_A 326 AASAGLVVEEVRQLPSPTIPYDLSLLVLAP 355 (360)
T ss_dssp HHHTTEEEEEEEEEECSSSSCEEEEEEEEE
T ss_pred HHHCCCeEEEEEeCCCCcccCccEEEEEEe
Confidence 99999999999887665 77888764
No 15
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.90 E-value=1.6e-23 Score=159.68 Aligned_cols=166 Identities=16% Similarity=0.327 Sum_probs=129.0
Q ss_pred cccccccccccC-CCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC-------CCCeeEEecCCccc---CC
Q 030291 4 LLVKDCRPIFQG-LRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ-------TDNLKYIEGDMFQF---IP 72 (180)
Q Consensus 4 ~l~~~~~~~~~~-~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-------~~~~~~~~~d~~~~---~~ 72 (180)
.+++.++ +.+ ..+|||||||+|.++..+++.+|+.+++++|++.+++.+++ ..++++..+|+.+. .+
T Consensus 169 ~~l~~~~--~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 246 (352)
T 3mcz_A 169 DVVSELG--VFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEG 246 (352)
T ss_dssp HHHHTCG--GGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTT
T ss_pred HHHHhCC--CcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCC
Confidence 4566666 566 89999999999999999999999999999999767777764 35799999999764 44
Q ss_pred -CccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEee-cCCcccCHH
Q 030291 73 -PSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFN-VGGKERTEQ 150 (180)
Q Consensus 73 -~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 150 (180)
.||+|++..++||++++....+|++++++|+| ||.+++.+...++..... ......+..+... .+++.++.+
T Consensus 247 ~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~t~~ 320 (352)
T 3mcz_A 247 GAADVVMLNDCLHYFDAREAREVIGHAAGLVKP---GGALLILTMTMNDDRVTP---ALSADFSLHMMVNTNHGELHPTP 320 (352)
T ss_dssp CCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEE---EEEEEEEEECCCTTSSSS---HHHHHHHHHHHHHSTTCCCCCHH
T ss_pred CCccEEEEecccccCCHHHHHHHHHHHHHHcCC---CCEEEEEEeccCCCCCCC---chHHHhhHHHHhhCCCCCcCCHH
Confidence 49999999999999998888999999999999 999999998776653321 1112222222221 245778999
Q ss_pred HHHHHHHHcCCeEEEEeecCCceeEEEEe
Q 030291 151 EWGSLFVNAGFTHYKIAPIFGIKSLIEVY 179 (180)
Q Consensus 151 ~~~~~l~~aGf~~~~~~~~~~~~~~~~~~ 179 (180)
+|.++++++||++++.. . +...++.++
T Consensus 321 e~~~ll~~aGf~~~~~~-~-g~~~l~~a~ 347 (352)
T 3mcz_A 321 WIAGVVRDAGLAVGERS-I-GRYTLLIGQ 347 (352)
T ss_dssp HHHHHHHHTTCEEEEEE-E-TTEEEEEEE
T ss_pred HHHHHHHHCCCceeeec-c-CceEEEEEe
Confidence 99999999999999843 3 445555544
No 16
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.89 E-value=4.6e-23 Score=156.01 Aligned_cols=166 Identities=21% Similarity=0.343 Sum_probs=128.9
Q ss_pred ccccccccc--cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC-------CCCeeEEecCCcc-cCC-C
Q 030291 5 LVKDCRPIF--QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ-------TDNLKYIEGDMFQ-FIP-P 73 (180)
Q Consensus 5 l~~~~~~~~--~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-------~~~~~~~~~d~~~-~~~-~ 73 (180)
+++.++ . .+..+|||||||+|.++..+++.+|+.+++++|++.+++.+++ ..++++..+|+.+ +.+ .
T Consensus 155 ~~~~~~--~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 232 (335)
T 2r3s_A 155 IAQLVN--ENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYGND 232 (335)
T ss_dssp HHHHHT--C--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC
T ss_pred HHHhcc--cccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCCCC
Confidence 344454 4 6788999999999999999999999999999999877777764 3479999999976 444 4
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEee-cCCcccCHHHH
Q 030291 74 SDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFN-VGGKERTEQEW 152 (180)
Q Consensus 74 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 152 (180)
||+|++..++||++++...+++++++++|+| ||.+++.+...+...... ......+..+... .+++.++.++|
T Consensus 233 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~t~~~~ 306 (335)
T 2r3s_A 233 YDLVLLPNFLHHFDVATCEQLLRKIKTALAV---EGKVIVFDFIPNSDRITP---PDAAAFSLVMLATTPNGDAYTFAEY 306 (335)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEECCCCTTSSCS---HHHHHHHHHHHHHSSSCCCCCHHHH
T ss_pred CcEEEEcchhccCCHHHHHHHHHHHHHhCCC---CcEEEEEeecCCCCcCCc---hHHHHHHHHHHeeCCCCCcCCHHHH
Confidence 9999999999999988888999999999999 999999998766543221 1111122212111 24577899999
Q ss_pred HHHHHHcCCeEEEEeecCCceeEEEE
Q 030291 153 GSLFVNAGFTHYKIAPIFGIKSLIEV 178 (180)
Q Consensus 153 ~~~l~~aGf~~~~~~~~~~~~~~~~~ 178 (180)
.++++++||+++++....+..+++.+
T Consensus 307 ~~ll~~aGf~~~~~~~~~~~~~~i~~ 332 (335)
T 2r3s_A 307 ESMFSNAGFSHSQLHSLPTTQQQVIV 332 (335)
T ss_dssp HHHHHHTTCSEEEEECCTTSSSEEEE
T ss_pred HHHHHHCCCCeeeEEECCCCceeEEE
Confidence 99999999999999888776565544
No 17
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.89 E-value=2.2e-22 Score=153.75 Aligned_cols=166 Identities=23% Similarity=0.443 Sum_probs=129.3
Q ss_pred cccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC-------CCCeeEEecCCcc-cCCCcc
Q 030291 4 LLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ-------TDNLKYIEGDMFQ-FIPPSD 75 (180)
Q Consensus 4 ~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-------~~~~~~~~~d~~~-~~~~~D 75 (180)
.+++.++ +++..+|||||||+|.++..+++.+|+.+++++|++.+++.+++ ..++++..+|+.+ +.+.+|
T Consensus 181 ~l~~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D 258 (359)
T 1x19_A 181 LLLEEAK--LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEAD 258 (359)
T ss_dssp HHHHHCC--CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCCS
T ss_pred HHHHhcC--CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCCC
Confidence 4555666 67889999999999999999999999999999999558887763 3469999999976 455679
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCc----ccCHHH
Q 030291 76 AFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGK----ERTEQE 151 (180)
Q Consensus 76 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 151 (180)
+|++..++|+++++...++|++++++|+| ||.+++.+...++..... .... ..... ...+++ +++.++
T Consensus 259 ~v~~~~vlh~~~d~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~-~~~~---~~~~~-~~~~g~~~~~~~t~~e 330 (359)
T 1x19_A 259 AVLFCRILYSANEQLSTIMCKKAFDAMRS---GGRLLILDMVIDDPENPN-FDYL---SHYIL-GAGMPFSVLGFKEQAR 330 (359)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHTTCCT---TCEEEEEEECCCCTTSCC-HHHH---HHHGG-GGGSSCCCCCCCCGGG
T ss_pred EEEEechhccCCHHHHHHHHHHHHHhcCC---CCEEEEEecccCCCCCch-HHHH---HHHHH-hcCCCCcccCCCCHHH
Confidence 99999999999997777999999999999 999999998766542111 1110 01000 011123 389999
Q ss_pred HHHHHHHcCCeEEEEeecCCceeEEEEeC
Q 030291 152 WGSLFVNAGFTHYKIAPIFGIKSLIEVYP 180 (180)
Q Consensus 152 ~~~~l~~aGf~~~~~~~~~~~~~~~~~~~ 180 (180)
|.++++++||+++++.... ..++++++|
T Consensus 331 ~~~ll~~aGf~~v~~~~~~-~~~vi~a~k 358 (359)
T 1x19_A 331 YKEILESLGYKDVTMVRKY-DHLLVQAVK 358 (359)
T ss_dssp HHHHHHHHTCEEEEEEEET-TEEEEEEEC
T ss_pred HHHHHHHCCCceEEEEecC-CceEEEEeC
Confidence 9999999999999998877 677777765
No 18
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.89 E-value=5.4e-22 Score=142.98 Aligned_cols=163 Identities=18% Similarity=0.202 Sum_probs=120.7
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----CCCeeEEecCCccc-C-CCccEEEecccccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----TDNLKYIEGDMFQF-I-PPSDAFFFKTVFHF 85 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----~~~~~~~~~d~~~~-~-~~~D~v~~~~~l~~ 85 (180)
..++.+|||||||+|.++..+++.+|+.+++++|+++ +++.+++ ..++++.++|+.+. . ..||+|++..+++|
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~ 121 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDMVVSALSIHH 121 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEEEEEESCGGG
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCceEEEEeCcccc
Confidence 3567899999999999999999999999999999965 8877764 34899999999662 2 46999999999999
Q ss_pred CChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhh-hhhh------ccc-----eeeEeecCCcccCHHHHH
Q 030291 86 FDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELT-ESKL------LFD-----IFMNFNVGGKERTEQEWG 153 (180)
Q Consensus 86 ~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~-~~~~------~~~-----~~~~~~~~~~~~~~~~~~ 153 (180)
++++...+++++++++|+| ||.+++.+...+......... ..+. ... ...........++.+++.
T Consensus 122 ~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (234)
T 3dtn_A 122 LEDEDKKELYKRSYSILKE---SGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQL 198 (234)
T ss_dssp SCHHHHHHHHHHHHHHEEE---EEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCC---CcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHH
Confidence 9998877899999999999 999999987765442211000 0000 000 000001223557899999
Q ss_pred HHHHHcCCeEEEEeecCCceeEEEE
Q 030291 154 SLFVNAGFTHYKIAPIFGIKSLIEV 178 (180)
Q Consensus 154 ~~l~~aGf~~~~~~~~~~~~~~~~~ 178 (180)
++++++||+.+++.......+.+..
T Consensus 199 ~ll~~aGF~~v~~~~~~~~~~~~~~ 223 (234)
T 3dtn_A 199 NWLKEAGFRDVSCIYKYYQFAVMFG 223 (234)
T ss_dssp HHHHHTTCEEEEEEEEETTEEEEEE
T ss_pred HHHHHcCCCceeeeeeecceeEEEE
Confidence 9999999999998877555554443
No 19
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.87 E-value=1.3e-21 Score=139.66 Aligned_cols=152 Identities=17% Similarity=0.214 Sum_probs=121.2
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHC-CCCeEEEeeCch-hhccCCC------CCCeeEEecCCcc-cC--CC
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAF-PGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQ-FI--PP 73 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~-~~--~~ 73 (180)
+++.+. +.++.+|||+|||+|.++..+++.. |..+++++|+++ +++.+++ ..++++.++|+.+ +. ..
T Consensus 29 ~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 106 (219)
T 3dh0_A 29 VLKEFG--LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNT 106 (219)
T ss_dssp HHHHHT--CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSC
T ss_pred HHHHhC--CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCC
Confidence 444555 6778899999999999999999885 778999999965 8888764 2579999999965 22 35
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHH
Q 030291 74 SDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWG 153 (180)
Q Consensus 74 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (180)
||+|++..+++|+++.. .+++++.++|+| ||.+++.++......... .....++.+++.
T Consensus 107 fD~v~~~~~l~~~~~~~--~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~----------------~~~~~~~~~~~~ 165 (219)
T 3dh0_A 107 VDFIFMAFTFHELSEPL--KFLEELKRVAKP---FAYLAIIDWKKEERDKGP----------------PPEEVYSEWEVG 165 (219)
T ss_dssp EEEEEEESCGGGCSSHH--HHHHHHHHHEEE---EEEEEEEEECSSCCSSSC----------------CGGGSCCHHHHH
T ss_pred eeEEEeehhhhhcCCHH--HHHHHHHHHhCC---CeEEEEEEecccccccCC----------------chhcccCHHHHH
Confidence 99999999999998877 789999999999 999999886654432110 112456899999
Q ss_pred HHHHHcCCeEEEEeecCCceeEEEEe
Q 030291 154 SLFVNAGFTHYKIAPIFGIKSLIEVY 179 (180)
Q Consensus 154 ~~l~~aGf~~~~~~~~~~~~~~~~~~ 179 (180)
++++++||++++.....+....+.++
T Consensus 166 ~~l~~~Gf~~~~~~~~~~~~~~~~~~ 191 (219)
T 3dh0_A 166 LILEDAGIRVGRVVEVGKYCFGVYAM 191 (219)
T ss_dssp HHHHHTTCEEEEEEEETTTEEEEEEE
T ss_pred HHHHHCCCEEEEEEeeCCceEEEEEE
Confidence 99999999999998887766666554
No 20
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.85 E-value=3.3e-20 Score=131.95 Aligned_cols=150 Identities=18% Similarity=0.205 Sum_probs=109.2
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC--CCCeeEEecCCccc--CCCccEEEeccccccCC
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ--TDNLKYIEGDMFQF--IPPSDAFFFKTVFHFFD 87 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~--~~~~~~~~~d~~~~--~~~~D~v~~~~~l~~~~ 87 (180)
++++.+|||||||+|.++..+++. +.+++++|+++ +++.+++ ..++++.++|+.+. ...||+|++..+++|++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~~ 121 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDAVFFAHWLAHVP 121 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEEEEEESCGGGSC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeEEEEechhhcCC
Confidence 456679999999999999999998 67899999966 8888875 36899999999664 23699999999999999
Q ss_pred hHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeE-eec------CCcccCHHHHHHHHHHcC
Q 030291 88 DEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMN-FNV------GGKERTEQEWGSLFVNAG 160 (180)
Q Consensus 88 ~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~l~~aG 160 (180)
++....+++++.++|+| ||.+++.+...+.......+.. ........ ... ...+.+.+++.++++++|
T Consensus 122 ~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 196 (218)
T 3ou2_A 122 DDRFEAFWESVRSAVAP---GGVVEFVDVTDHERRLEQQDDS--EPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALG 196 (218)
T ss_dssp HHHHHHHHHHHHHHEEE---EEEEEEEEECCCC--------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCC---CeEEEEEeCCCCccccchhhhc--ccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCC
Confidence 98677999999999999 9999998876633221110000 00000000 001 123569999999999999
Q ss_pred CeEEEEeec
Q 030291 161 FTHYKIAPI 169 (180)
Q Consensus 161 f~~~~~~~~ 169 (180)
|++......
T Consensus 197 f~v~~~~~~ 205 (218)
T 3ou2_A 197 WSCSVDEVH 205 (218)
T ss_dssp EEEEEEEEE
T ss_pred CEEEeeecc
Confidence 995544443
No 21
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.85 E-value=1.7e-20 Score=137.23 Aligned_cols=153 Identities=19% Similarity=0.277 Sum_probs=117.8
Q ss_pred cccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----CCCeeEEecCCcc-cC--CCcc
Q 030291 4 LLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----TDNLKYIEGDMFQ-FI--PPSD 75 (180)
Q Consensus 4 ~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----~~~~~~~~~d~~~-~~--~~~D 75 (180)
.+++.+. ++++.+|||||||+|.++..+++.+ +.+++++|+++ +++.+++ ..++++.++|+.+ +. ..||
T Consensus 46 ~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD 122 (266)
T 3ujc_A 46 KILSDIE--LNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFD 122 (266)
T ss_dssp HHTTTCC--CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEE
T ss_pred HHHHhcC--CCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEE
Confidence 4555665 6788899999999999999999987 77999999966 8877765 2689999999965 22 3699
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHH
Q 030291 76 AFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSL 155 (180)
Q Consensus 76 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (180)
+|++..+++|++......+++++.++|+| ||.+++.++.......... ...... ...+...++.+++.++
T Consensus 123 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~ 192 (266)
T 3ujc_A 123 LIYSRDAILALSLENKNKLFQKCYKWLKP---TGTLLITDYCATEKENWDD--EFKEYV-----KQRKYTLITVEEYADI 192 (266)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEEEEESCGGGCCH--HHHHHH-----HHHTCCCCCHHHHHHH
T ss_pred EEeHHHHHHhcChHHHHHHHHHHHHHcCC---CCEEEEEEeccCCcccchH--HHHHHH-----hcCCCCCCCHHHHHHH
Confidence 99999999999666666999999999999 9999999887655211100 000000 0123356789999999
Q ss_pred HHHcCCeEEEEeec
Q 030291 156 FVNAGFTHYKIAPI 169 (180)
Q Consensus 156 l~~aGf~~~~~~~~ 169 (180)
++++||++++....
T Consensus 193 l~~~Gf~~~~~~~~ 206 (266)
T 3ujc_A 193 LTACNFKNVVSKDL 206 (266)
T ss_dssp HHHTTCEEEEEEEC
T ss_pred HHHcCCeEEEEEeC
Confidence 99999999988755
No 22
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.85 E-value=3.7e-21 Score=137.31 Aligned_cols=159 Identities=15% Similarity=0.195 Sum_probs=114.2
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-C-CCeeEEecCCcc-cC-CCccEEEe
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-T-DNLKYIEGDMFQ-FI-PPSDAFFF 79 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-~-~~~~~~~~d~~~-~~-~~~D~v~~ 79 (180)
+++.+. ..++.+|||||||+|.++..+++. +.+++++|+++ +++.+++ . .++++.++|+.+ +. ..||+|++
T Consensus 37 ~l~~~~--~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v~~ 112 (220)
T 3hnr_A 37 ILEDVV--NKSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTIVS 112 (220)
T ss_dssp HHHHHH--HTCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEEEE
T ss_pred HHHHhh--ccCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEEEE
Confidence 334444 457889999999999999999988 67899999966 8888775 2 489999999965 22 46999999
Q ss_pred ccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhcccee--eEeecCCcccCHHHHHHHHH
Q 030291 80 KTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIF--MNFNVGGKERTEQEWGSLFV 157 (180)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~ 157 (180)
..+++|++++....+|+++.++|+| ||.+++.++..................... ..........+.+++.++++
T Consensus 113 ~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 189 (220)
T 3hnr_A 113 TYAFHHLTDDEKNVAIAKYSQLLNK---GGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFE 189 (220)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCT---TCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHH
T ss_pred CcchhcCChHHHHHHHHHHHHhcCC---CCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHH
Confidence 9999999999865689999999999 999999986654332111000000000000 00001123458899999999
Q ss_pred HcCCeEEEEeecC
Q 030291 158 NAGFTHYKIAPIF 170 (180)
Q Consensus 158 ~aGf~~~~~~~~~ 170 (180)
++||+++......
T Consensus 190 ~aGf~v~~~~~~~ 202 (220)
T 3hnr_A 190 NNGFHVTFTRLNH 202 (220)
T ss_dssp HTTEEEEEEECSS
T ss_pred HCCCEEEEeeccc
Confidence 9999887776653
No 23
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.85 E-value=5.5e-21 Score=140.67 Aligned_cols=154 Identities=16% Similarity=0.156 Sum_probs=116.8
Q ss_pred cccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcc-cC--C
Q 030291 4 LLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQ-FI--P 72 (180)
Q Consensus 4 ~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~-~~--~ 72 (180)
.+++.+. +.++.+|||||||+|.++..+++.. +.+++++|+++ +++.+++ ..++++.++|+.+ +. .
T Consensus 52 ~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 128 (273)
T 3bus_A 52 EMIALLD--VRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDA 128 (273)
T ss_dssp HHHHHSC--CCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTT
T ss_pred HHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCC
Confidence 3445555 6778999999999999999999887 68999999966 8877764 3479999999965 32 3
Q ss_pred CccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHH
Q 030291 73 PSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEW 152 (180)
Q Consensus 73 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (180)
.||+|++..+++|+++.. .+++++.++|+| ||.+++.+...........-....... ....+...++.+++
T Consensus 129 ~fD~v~~~~~l~~~~~~~--~~l~~~~~~L~p---gG~l~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 199 (273)
T 3bus_A 129 SFDAVWALESLHHMPDRG--RALREMARVLRP---GGTVAIADFVLLAPVEGAKKEAVDAFR----AGGGVLSLGGIDEY 199 (273)
T ss_dssp CEEEEEEESCTTTSSCHH--HHHHHHHTTEEE---EEEEEEEEEEESSCCCHHHHHHHHHHH----HHHTCCCCCCHHHH
T ss_pred CccEEEEechhhhCCCHH--HHHHHHHHHcCC---CeEEEEEEeeccCCCChhHHHHHHHHH----hhcCccCCCCHHHH
Confidence 699999999999999887 889999999999 999999988765433221000011110 01123456799999
Q ss_pred HHHHHHcCCeEEEEeec
Q 030291 153 GSLFVNAGFTHYKIAPI 169 (180)
Q Consensus 153 ~~~l~~aGf~~~~~~~~ 169 (180)
.++++++||+++++...
T Consensus 200 ~~~l~~aGf~~~~~~~~ 216 (273)
T 3bus_A 200 ESDVRQAELVVTSTVDI 216 (273)
T ss_dssp HHHHHHTTCEEEEEEEC
T ss_pred HHHHHHcCCeEEEEEEC
Confidence 99999999999887765
No 24
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.84 E-value=1.3e-20 Score=136.19 Aligned_cols=143 Identities=17% Similarity=0.232 Sum_probs=110.8
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC---CCCeeEEecCCcc-cC--CCccEEEecccccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ---TDNLKYIEGDMFQ-FI--PPSDAFFFKTVFHF 85 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~---~~~~~~~~~d~~~-~~--~~~D~v~~~~~l~~ 85 (180)
++++.+|||||||+|.++..+++. +.+++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|++..+++|
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 128 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEW 128 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTS
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhh
Confidence 457889999999999999999988 66899999966 8887765 4789999999965 22 36999999999999
Q ss_pred CChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEEE
Q 030291 86 FDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHYK 165 (180)
Q Consensus 86 ~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 165 (180)
+++.. .+++++.++|+| ||.+++.+.......... ....... .......++.+++.++++++||++++
T Consensus 129 ~~~~~--~~l~~~~~~L~p---gG~l~i~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~l~~~Gf~~~~ 196 (242)
T 3l8d_A 129 TEEPL--RALNEIKRVLKS---DGYACIAILGPTAKPREN---SYPRLYG----KDVVCNTMMPWEFEQLVKEQGFKVVD 196 (242)
T ss_dssp SSCHH--HHHHHHHHHEEE---EEEEEEEEECTTCGGGGG---GGGGGGT----CCCSSCCCCHHHHHHHHHHTTEEEEE
T ss_pred ccCHH--HHHHHHHHHhCC---CeEEEEEEcCCcchhhhh---hhhhhcc----ccccccCCCHHHHHHHHHHcCCEEEE
Confidence 99887 789999999999 898888876544332211 1111111 11233567899999999999999998
Q ss_pred Eeec
Q 030291 166 IAPI 169 (180)
Q Consensus 166 ~~~~ 169 (180)
....
T Consensus 197 ~~~~ 200 (242)
T 3l8d_A 197 GIGV 200 (242)
T ss_dssp EEEE
T ss_pred eecc
Confidence 7754
No 25
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.84 E-value=8.6e-22 Score=140.16 Aligned_cols=154 Identities=15% Similarity=0.158 Sum_probs=110.2
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcc-cC--CCccEEEecc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQ-FI--PPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~-~~--~~~D~v~~~~ 81 (180)
.++. +|||||||+|.++..+++. ++.+++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|++..
T Consensus 42 ~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 119 (219)
T 3dlc_A 42 ITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRG 119 (219)
T ss_dssp CCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEES
T ss_pred CCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECc
Confidence 3444 9999999999999999998 688999999965 8887764 3589999999966 32 3699999999
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccc-eeeEeecCCcccCHHHHHHHHHHcC
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFD-IFMNFNVGGKERTEQEWGSLFVNAG 160 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~aG 160 (180)
+++|+++.. .+++++.++|+| ||.+++.+.................... .......+...++.+++.++++++|
T Consensus 120 ~l~~~~~~~--~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 194 (219)
T 3dlc_A 120 SVFFWEDVA--TAFREIYRILKS---GGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIG 194 (219)
T ss_dssp CGGGCSCHH--HHHHHHHHHEEE---EEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHT
T ss_pred hHhhccCHH--HHHHHHHHhCCC---CCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcC
Confidence 999998887 789999999999 8998887744332111100000000000 0000001224457899999999999
Q ss_pred CeEEEEeecCCce
Q 030291 161 FTHYKIAPIFGIK 173 (180)
Q Consensus 161 f~~~~~~~~~~~~ 173 (180)
|+.+++.......
T Consensus 195 f~~v~~~~~~~~~ 207 (219)
T 3dlc_A 195 ISSYEIILGDEGF 207 (219)
T ss_dssp CSSEEEEEETTEE
T ss_pred CCeEEEEecCCce
Confidence 9999888765543
No 26
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.84 E-value=1.6e-20 Score=136.96 Aligned_cols=150 Identities=13% Similarity=0.152 Sum_probs=114.9
Q ss_pred cccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCccc--CCC
Q 030291 4 LLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQF--IPP 73 (180)
Q Consensus 4 ~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~--~~~ 73 (180)
.+++.+. ++++.+|||||||+|..+..+++.. +.+++++|+++ +++.+++ ..++++.++|+.+. ...
T Consensus 27 ~l~~~~~--~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 103 (256)
T 1nkv_A 27 TLGRVLR--MKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANEK 103 (256)
T ss_dssp HHHHHTC--CCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSSC
T ss_pred HHHHhcC--CCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCCC
Confidence 3445555 6788899999999999999999987 67899999966 8888764 25899999999652 236
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHH
Q 030291 74 SDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWG 153 (180)
Q Consensus 74 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (180)
||+|++..+++|+++.. .+|++++++||| ||.+++.+...........+... .. .......++.+++.
T Consensus 104 fD~V~~~~~~~~~~~~~--~~l~~~~r~Lkp---gG~l~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~ 171 (256)
T 1nkv_A 104 CDVAACVGATWIAGGFA--GAEELLAQSLKP---GGIMLIGEPYWRQLPATEEIAQA---CG----VSSTSDFLTLPGLV 171 (256)
T ss_dssp EEEEEEESCGGGTSSSH--HHHHHHTTSEEE---EEEEEEEEEEETTCCSSHHHHHT---TT----CSCGGGSCCHHHHH
T ss_pred CCEEEECCChHhcCCHH--HHHHHHHHHcCC---CeEEEEecCcccCCCChHHHHHH---Hh----cccccccCCHHHHH
Confidence 99999999999999877 789999999999 99999988766544322111111 10 01112567899999
Q ss_pred HHHHHcCCeEEEEee
Q 030291 154 SLFVNAGFTHYKIAP 168 (180)
Q Consensus 154 ~~l~~aGf~~~~~~~ 168 (180)
++++++||+++++..
T Consensus 172 ~~l~~aGf~~~~~~~ 186 (256)
T 1nkv_A 172 GAFDDLGYDVVEMVL 186 (256)
T ss_dssp HHHHTTTBCCCEEEE
T ss_pred HHHHHCCCeeEEEEe
Confidence 999999999887653
No 27
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.84 E-value=1.2e-20 Score=138.32 Aligned_cols=162 Identities=14% Similarity=0.083 Sum_probs=114.3
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-CCCeeEEecCCccc--CCCccEEEecc-ccccCC
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-TDNLKYIEGDMFQF--IPPSDAFFFKT-VFHFFD 87 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-~~~~~~~~~d~~~~--~~~~D~v~~~~-~l~~~~ 87 (180)
.+++.+|||||||+|.++..+++. +.+++++|+++ +++.+++ ..++++.++|+.+. ...||+|++.. +++|++
T Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 48 SPKAASLLDVACGTGMHLRHLADS--FGTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp CTTCCEEEEETCTTSHHHHHHTTT--SSEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEECTTGGGGSC
T ss_pred CCCCCcEEEeCCcCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEEcCchhhhcC
Confidence 356789999999999999999888 45799999966 8888876 56899999999652 23699999998 999997
Q ss_pred h-HHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhh------------hhh--------hccceeeEe------
Q 030291 88 D-EDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELT------------ESK--------LLFDIFMNF------ 140 (180)
Q Consensus 88 ~-~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~------------~~~--------~~~~~~~~~------ 140 (180)
+ .+...+++++.++|+| ||.+++.....+.......+. ..+ .........
T Consensus 126 ~~~~~~~~l~~~~~~L~p---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (263)
T 3pfg_A 126 GQAELDAALERFAAHVLP---DGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRG 202 (263)
T ss_dssp HHHHHHHHHHHHHHTEEE---EEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTE
T ss_pred CHHHHHHHHHHHHHhcCC---CcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCc
Confidence 5 3455889999999999 888888543322211000000 000 000000000
Q ss_pred ------ecCCcccCHHHHHHHHHHcCCeEEEEeecCCceeEEEEe
Q 030291 141 ------NVGGKERTEQEWGSLFVNAGFTHYKIAPIFGIKSLIEVY 179 (180)
Q Consensus 141 ------~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~ 179 (180)
....+.++.++|.++|+++||+++++....+...++.++
T Consensus 203 ~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~ 247 (263)
T 3pfg_A 203 ITHHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGL 247 (263)
T ss_dssp EEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEE
T ss_pred EEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEe
Confidence 011355799999999999999999998777766666554
No 28
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.84 E-value=1.4e-20 Score=137.66 Aligned_cols=152 Identities=16% Similarity=0.244 Sum_probs=113.1
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCcc-cC--CCc
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQ-FI--PPS 74 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~-~~--~~~ 74 (180)
+++.+. ..++.+|||||||+|.++..+++..+ +++++|+++ +++.+++ ..++++.++|+.+ +. ..|
T Consensus 29 l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~f 104 (260)
T 1vl5_A 29 LMQIAA--LKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERF 104 (260)
T ss_dssp HHHHHT--CCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCE
T ss_pred HHHHhC--CCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCE
Confidence 445555 56788999999999999999998853 899999966 8888764 2579999999965 33 369
Q ss_pred cEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHH
Q 030291 75 DAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGS 154 (180)
Q Consensus 75 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (180)
|+|+++.++||+++.. .++++++++|+| ||.+++.+...+...... ......... ....+...++.++|.+
T Consensus 105 D~V~~~~~l~~~~d~~--~~l~~~~r~Lkp---gG~l~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~ 175 (260)
T 1vl5_A 105 HIVTCRIAAHHFPNPA--SFVSEAYRVLKK---GGQLLLVDNSAPENDAFD---VFYNYVEKE-RDYSHHRAWKKSDWLK 175 (260)
T ss_dssp EEEEEESCGGGCSCHH--HHHHHHHHHEEE---EEEEEEEEEEBCSSHHHH---HHHHHHHHH-HCTTCCCCCBHHHHHH
T ss_pred EEEEEhhhhHhcCCHH--HHHHHHHHHcCC---CCEEEEEEcCCCCCHHHH---HHHHHHHHh-cCccccCCCCHHHHHH
Confidence 9999999999999887 789999999999 999999887655432111 111000000 0011235678999999
Q ss_pred HHHHcCCeEEEEeec
Q 030291 155 LFVNAGFTHYKIAPI 169 (180)
Q Consensus 155 ~l~~aGf~~~~~~~~ 169 (180)
+++++||+++.+...
T Consensus 176 ~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 176 MLEEAGFELEELHCF 190 (260)
T ss_dssp HHHHHTCEEEEEEEE
T ss_pred HHHHCCCeEEEEEEe
Confidence 999999998877654
No 29
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.84 E-value=2.6e-20 Score=131.36 Aligned_cols=139 Identities=15% Similarity=0.073 Sum_probs=109.9
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-CCCeeEEecCCcc-cC--CCccEEEeccccccCChH
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-TDNLKYIEGDMFQ-FI--PPSDAFFFKTVFHFFDDE 89 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-~~~~~~~~~d~~~-~~--~~~D~v~~~~~l~~~~~~ 89 (180)
.+.+|||+|||+|.++..+++. +.+++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|++..+++|++..
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~ 118 (203)
T 3h2b_A 41 VDGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPG 118 (203)
T ss_dssp CCSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTT
T ss_pred CCCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHH
Confidence 4789999999999999999988 56899999966 8888876 6789999999965 22 369999999999999855
Q ss_pred HHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEEEEeec
Q 030291 90 DCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHYKIAPI 169 (180)
Q Consensus 90 ~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 169 (180)
....+++++.++|+| ||.+++.......... ..........++.+++.++++++||+++++...
T Consensus 119 ~~~~~l~~~~~~L~p---gG~l~i~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 182 (203)
T 3h2b_A 119 ELPDALVALRMAVED---GGGLLMSFFSGPSLEP-------------MYHPVATAYRWPLPELAQALETAGFQVTSSHWD 182 (203)
T ss_dssp THHHHHHHHHHTEEE---EEEEEEEEECCSSCEE-------------ECCSSSCEEECCHHHHHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCC---CcEEEEEEccCCchhh-------------hhchhhhhccCCHHHHHHHHHHCCCcEEEEEec
Confidence 555899999999999 8888888765433110 000011224578999999999999999988876
Q ss_pred CC
Q 030291 170 FG 171 (180)
Q Consensus 170 ~~ 171 (180)
.+
T Consensus 183 ~~ 184 (203)
T 3h2b_A 183 PR 184 (203)
T ss_dssp TT
T ss_pred CC
Confidence 44
No 30
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.83 E-value=3.8e-20 Score=134.68 Aligned_cols=148 Identities=16% Similarity=0.240 Sum_probs=112.6
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----CCCeeEEecCCcc-cC--CCccE
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----TDNLKYIEGDMFQ-FI--PPSDA 76 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----~~~~~~~~~d~~~-~~--~~~D~ 76 (180)
+++.+. ..++.+|||||||+|.++..+++.. ..+++++|+++ +++.+++ ..++++.++|+.+ +. ..||+
T Consensus 85 ~l~~l~--~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 161 (254)
T 1xtp_A 85 FIASLP--GHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDL 161 (254)
T ss_dssp HHHTST--TCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEE
T ss_pred HHHhhc--ccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEE
Confidence 344444 5678899999999999999998886 55799999966 8887765 2579999999855 22 36999
Q ss_pred EEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHH
Q 030291 77 FFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLF 156 (180)
Q Consensus 77 v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 156 (180)
|++..+++|+++.....+++++.++|+| ||.+++.+........ . .....+...++.+++.+++
T Consensus 162 v~~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~---------~----~~~~~~~~~~~~~~~~~~l 225 (254)
T 1xtp_A 162 IVIQWTAIYLTDADFVKFFKHCQQALTP---NGYIFFKENCSTGDRF---------L----VDKEDSSLTRSDIHYKRLF 225 (254)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEEEBC--CCE---------E----EETTTTEEEBCHHHHHHHH
T ss_pred EEEcchhhhCCHHHHHHHHHHHHHhcCC---CeEEEEEecCCCcccc---------e----ecccCCcccCCHHHHHHHH
Confidence 9999999999887677999999999999 8999998764322110 0 0001122346899999999
Q ss_pred HHcCCeEEEEeecCC
Q 030291 157 VNAGFTHYKIAPIFG 171 (180)
Q Consensus 157 ~~aGf~~~~~~~~~~ 171 (180)
+++||+++++.....
T Consensus 226 ~~aGf~~~~~~~~~~ 240 (254)
T 1xtp_A 226 NESGVRVVKEAFQEE 240 (254)
T ss_dssp HHHTCCEEEEEECTT
T ss_pred HHCCCEEEEeeecCC
Confidence 999999998876544
No 31
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.83 E-value=5e-20 Score=137.15 Aligned_cols=144 Identities=19% Similarity=0.286 Sum_probs=111.7
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcc-cC--CCccEEEecc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQ-FI--PPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~-~~--~~~D~v~~~~ 81 (180)
+.++.+|||||||+|.++..+++.+ +.+++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|++..
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQD 158 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecc
Confidence 5678899999999999999999886 56899999966 8887764 3679999999965 32 3699999999
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCC
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGF 161 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 161 (180)
+++|+++.. .++++++++|+| ||.+++.++.............. .... ......+.+++.++++++||
T Consensus 159 ~l~~~~~~~--~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~l~~aGf 226 (297)
T 2o57_A 159 AFLHSPDKL--KVFQECARVLKP---RGVMAITDPMKEDGIDKSSIQPI---LDRI----KLHDMGSLGLYRSLAKECGL 226 (297)
T ss_dssp CGGGCSCHH--HHHHHHHHHEEE---EEEEEEEEEEECTTCCGGGGHHH---HHHH----TCSSCCCHHHHHHHHHHTTE
T ss_pred hhhhcCCHH--HHHHHHHHHcCC---CeEEEEEEeccCCCCchHHHHHH---HHHh----cCCCCCCHHHHHHHHHHCCC
Confidence 999999976 889999999999 99999998876544322111111 1100 11134588999999999999
Q ss_pred eEEEEeec
Q 030291 162 THYKIAPI 169 (180)
Q Consensus 162 ~~~~~~~~ 169 (180)
+++++...
T Consensus 227 ~~~~~~~~ 234 (297)
T 2o57_A 227 VTLRTFSR 234 (297)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEC
Confidence 99988654
No 32
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.83 E-value=8.8e-21 Score=130.26 Aligned_cols=149 Identities=17% Similarity=0.193 Sum_probs=118.0
Q ss_pred ccccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-CCCeeEEecCCcc-cCCCccEEEe
Q 030291 3 TLLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-TDNLKYIEGDMFQ-FIPPSDAFFF 79 (180)
Q Consensus 3 ~~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-~~~~~~~~~d~~~-~~~~~D~v~~ 79 (180)
+.+++.+. ..++.+|||+|||+|.++..+++.. .+++++|+++ +++.+++ ..++++.++| .. ....||+|++
T Consensus 7 ~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~v~~~~~d-~~~~~~~~D~v~~ 81 (170)
T 3i9f_A 7 EEYLPNIF--EGKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEKFDSVITLSDP-KEIPDNSVDFILF 81 (170)
T ss_dssp TTTHHHHH--SSCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHHCTTSEEESSG-GGSCTTCEEEEEE
T ss_pred HHHHHhcC--cCCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHhCCCcEEEeCC-CCCCCCceEEEEE
Confidence 44566666 6788899999999999999999886 3899999965 8888775 6789999999 33 3346999999
Q ss_pred ccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHc
Q 030291 80 KTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNA 159 (180)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 159 (180)
..+++|+++.. .+++++.++|+| ||.+++.++......... .....++.+++.++++
T Consensus 82 ~~~l~~~~~~~--~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~-- 138 (170)
T 3i9f_A 82 ANSFHDMDDKQ--HVISEVKRILKD---DGRVIIIDWRKENTGIGP----------------PLSIRMDEKDYMGWFS-- 138 (170)
T ss_dssp ESCSTTCSCHH--HHHHHHHHHEEE---EEEEEEEEECSSCCSSSS----------------CGGGCCCHHHHHHHTT--
T ss_pred ccchhcccCHH--HHHHHHHHhcCC---CCEEEEEEcCccccccCc----------------hHhhhcCHHHHHHHHh--
Confidence 99999998877 789999999999 999999887654332110 1123468999999999
Q ss_pred CCeEEEEeecCCceeEEEEe
Q 030291 160 GFTHYKIAPIFGIKSLIEVY 179 (180)
Q Consensus 160 Gf~~~~~~~~~~~~~~~~~~ 179 (180)
||++++..........+.+.
T Consensus 139 Gf~~~~~~~~~~~~~~l~~~ 158 (170)
T 3i9f_A 139 NFVVEKRFNPTPYHFGLVLK 158 (170)
T ss_dssp TEEEEEEECSSTTEEEEEEE
T ss_pred CcEEEEccCCCCceEEEEEe
Confidence 99999999888766665543
No 33
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.83 E-value=3.6e-20 Score=137.31 Aligned_cols=157 Identities=17% Similarity=0.175 Sum_probs=115.4
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcccCCCccE
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQFIPPSDA 76 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~~~~~D~ 76 (180)
+++.+. ++++.+|||||||+|.++..+++.. +.+++++|+++ +++.+++ ..++++.++|+.+..+.||+
T Consensus 56 ~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~ 132 (287)
T 1kpg_A 56 ALGKLG--LQPGMTLLDVGCGWGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDR 132 (287)
T ss_dssp HHTTTT--CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSE
T ss_pred HHHHcC--CCCcCEEEEECCcccHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeE
Confidence 445555 6778899999999999999998665 55999999965 8877764 25899999999553357999
Q ss_pred EEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCc--------hhhhhhhhccceeeEeecCCcccC
Q 030291 77 FFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDD--------RELTESKLLFDIFMNFNVGGKERT 148 (180)
Q Consensus 77 v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 148 (180)
|++..+++|+++.....+++++.++|+| ||.+++.+......... ........... .....++...+
T Consensus 133 v~~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s 207 (287)
T 1kpg_A 133 IVSIGAFEHFGHERYDAFFSLAHRLLPA---DGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIV--TEIFPGGRLPS 207 (287)
T ss_dssp EEEESCGGGTCTTTHHHHHHHHHHHSCT---TCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHH--HHTSTTCCCCC
T ss_pred EEEeCchhhcChHHHHHHHHHHHHhcCC---CCEEEEEEecCCCccccccccccccccccchhhhHH--heeCCCCCCCC
Confidence 9999999999655555889999999999 99999998876542110 00000000000 00112345679
Q ss_pred HHHHHHHHHHcCCeEEEEeec
Q 030291 149 EQEWGSLFVNAGFTHYKIAPI 169 (180)
Q Consensus 149 ~~~~~~~l~~aGf~~~~~~~~ 169 (180)
.+++.++++++||+++++...
T Consensus 208 ~~~~~~~l~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 208 IPMVQECASANGFTVTRVQSL 228 (287)
T ss_dssp HHHHHHHHHTTTCEEEEEEEC
T ss_pred HHHHHHHHHhCCcEEEEEEeC
Confidence 999999999999999988764
No 34
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.83 E-value=1.1e-19 Score=131.50 Aligned_cols=142 Identities=18% Similarity=0.250 Sum_probs=110.2
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcc---cC--CCccEEEeccccccC
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQ---FI--PPSDAFFFKTVFHFF 86 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~---~~--~~~D~v~~~~~l~~~ 86 (180)
++++.+|||||||+|.++..+++. +.+++++|+++ +++.+++. +++.++|..+ +. ..||+|++..+++|+
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~ 114 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHL 114 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEEESCGGGS
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEECCchhhC
Confidence 457789999999999999999888 56799999966 88888765 8888998855 22 369999999999999
Q ss_pred ChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEEEE
Q 030291 87 DDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHYKI 166 (180)
Q Consensus 87 ~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 166 (180)
+++....+++++.++|+| ||.+++..+..... . ...... ....+...++.+++.++++++||+++++
T Consensus 115 ~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~---~---~~~~~~----~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 181 (240)
T 3dli_A 115 DPERLFELLSLCYSKMKY---SSYIVIESPNPTSL---Y---SLINFY----IDPTHKKPVHPETLKFILEYLGFRDVKI 181 (240)
T ss_dssp CGGGHHHHHHHHHHHBCT---TCCEEEEEECTTSH---H---HHHHHT----TSTTCCSCCCHHHHHHHHHHHTCEEEEE
T ss_pred CcHHHHHHHHHHHHHcCC---CcEEEEEeCCcchh---H---HHHHHh----cCccccccCCHHHHHHHHHHCCCeEEEE
Confidence 988666999999999999 99999877643221 1 111111 0112335678899999999999999988
Q ss_pred eecCC
Q 030291 167 APIFG 171 (180)
Q Consensus 167 ~~~~~ 171 (180)
.....
T Consensus 182 ~~~~~ 186 (240)
T 3dli_A 182 EFFEE 186 (240)
T ss_dssp EEECC
T ss_pred EEecc
Confidence 76653
No 35
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.83 E-value=3.7e-20 Score=138.31 Aligned_cols=158 Identities=19% Similarity=0.240 Sum_probs=118.2
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcccCCCccE
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQFIPPSDA 76 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~~~~~D~ 76 (180)
+++.+. ++++.+|||||||+|.++..+++.++ .+++++|+++ +++.+++ ..++++.++|+.+....||+
T Consensus 64 ~~~~~~--~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~ 140 (302)
T 3hem_A 64 ALDKLN--LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDR 140 (302)
T ss_dssp HHHTTC--CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCSE
T ss_pred HHHHcC--CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCccE
Confidence 455555 67888999999999999999999874 7899999966 8888864 24799999999665457999
Q ss_pred EEeccccccCCh-------HHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhh--------ccce-eeEe
Q 030291 77 FFFKTVFHFFDD-------EDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKL--------LFDI-FMNF 140 (180)
Q Consensus 77 v~~~~~l~~~~~-------~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~-~~~~ 140 (180)
|++..+++|+++ .....+++++.++|+| ||.+++.+.......... .... ..+. ....
T Consensus 141 v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 214 (302)
T 3hem_A 141 IVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPD---DGRMLLHTITIPDKEEAQ---ELGLTSPMSLLRFIKFILTEI 214 (302)
T ss_dssp EEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCT---TCEEEEEEEECCCHHHHH---HHTCCCCHHHHHHHHHHHHHT
T ss_pred EEEcchHHhcCccccccchhHHHHHHHHHHHhcCC---CcEEEEEEEeccCccchh---hccccccccccchHHHHHHhc
Confidence 999999999955 3455899999999999 999999887665432110 0000 0000 0011
Q ss_pred ecCCcccCHHHHHHHHHHcCCeEEEEeecCC
Q 030291 141 NVGGKERTEQEWGSLFVNAGFTHYKIAPIFG 171 (180)
Q Consensus 141 ~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~ 171 (180)
..++...+.+++.++++++||+++++...+.
T Consensus 215 ~p~~~~~s~~~~~~~l~~aGf~~~~~~~~~~ 245 (302)
T 3hem_A 215 FPGGRLPRISQVDYYSSNAGWKVERYHRIGA 245 (302)
T ss_dssp CTTCCCCCHHHHHHHHHHHTCEEEEEEECGG
T ss_pred CCCCCCCCHHHHHHHHHhCCcEEEEEEeCch
Confidence 2334567899999999999999998876543
No 36
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.83 E-value=8.6e-20 Score=129.50 Aligned_cols=138 Identities=14% Similarity=0.122 Sum_probs=107.6
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCccc--CCCccEEEeccccccCChH
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQF--IPPSDAFFFKTVFHFFDDE 89 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~--~~~~D~v~~~~~l~~~~~~ 89 (180)
++++.+|||||||+|.++..+++. +.+++++|+++ +++.+++..++++.++|+.+. ...||+|++..+++|+++.
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~ 118 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAVWAHACLLHVPRD 118 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEEEECSCGGGSCHH
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEEEecCchhhcCHH
Confidence 456889999999999999999988 66899999966 888887654778888888542 2369999999999999976
Q ss_pred HHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcC-CeEEEEee
Q 030291 90 DCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAG-FTHYKIAP 168 (180)
Q Consensus 90 ~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 168 (180)
....++++++++|+| ||.+++........... ... .....++.+++.++++++| |+++++..
T Consensus 119 ~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~--------~~~------~~~~~~~~~~~~~~l~~aG~f~~~~~~~ 181 (211)
T 3e23_A 119 ELADVLKLIWRALKP---GGLFYASYKSGEGEGRD--------KLA------RYYNYPSEEWLRARYAEAGTWASVAVES 181 (211)
T ss_dssp HHHHHHHHHHHHEEE---EEEEEEEEECCSSCEEC--------TTS------CEECCCCHHHHHHHHHHHCCCSEEEEEE
T ss_pred HHHHHHHHHHHhcCC---CcEEEEEEcCCCccccc--------ccc------hhccCCCHHHHHHHHHhCCCcEEEEEEe
Confidence 667999999999999 88888875433221110 000 1124579999999999999 99988765
Q ss_pred c
Q 030291 169 I 169 (180)
Q Consensus 169 ~ 169 (180)
.
T Consensus 182 ~ 182 (211)
T 3e23_A 182 S 182 (211)
T ss_dssp E
T ss_pred c
Confidence 4
No 37
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.82 E-value=2.9e-20 Score=135.70 Aligned_cols=154 Identities=12% Similarity=0.127 Sum_probs=111.2
Q ss_pred cccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-CCCeeEEecCCccc--CCCccEEEe
Q 030291 4 LLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-TDNLKYIEGDMFQF--IPPSDAFFF 79 (180)
Q Consensus 4 ~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-~~~~~~~~~d~~~~--~~~~D~v~~ 79 (180)
.+++.+. ..++.+|||||||+|.++..+++.+|+.+++++|+++ +++.+++ ..++++.++|+.+. ...||+|++
T Consensus 24 ~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~ 101 (259)
T 2p35_A 24 DLLAQVP--LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKADLLYA 101 (259)
T ss_dssp HHHTTCC--CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCEEEEEE
T ss_pred HHHHhcC--CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCcCEEEE
Confidence 3455555 5678899999999999999999998888999999966 8888875 57899999998652 235999999
Q ss_pred ccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhh---ccceeeE-eecCCcccCHHHHHHH
Q 030291 80 KTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKL---LFDIFMN-FNVGGKERTEQEWGSL 155 (180)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~ 155 (180)
+.++||+++.. .+++++.++|+| ||.+++..+..........+..... +...... ...+...++.+++.++
T Consensus 102 ~~~l~~~~~~~--~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (259)
T 2p35_A 102 NAVFQWVPDHL--AVLSQLMDQLES---GGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNA 176 (259)
T ss_dssp ESCGGGSTTHH--HHHHHHGGGEEE---EEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHH
T ss_pred eCchhhCCCHH--HHHHHHHHhcCC---CeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHH
Confidence 99999998877 789999999999 8988888754322111111111110 1111000 0123456799999999
Q ss_pred HHHcCCeEE
Q 030291 156 FVNAGFTHY 164 (180)
Q Consensus 156 l~~aGf~~~ 164 (180)
|+++||++.
T Consensus 177 l~~aGf~v~ 185 (259)
T 2p35_A 177 LSPKSSRVD 185 (259)
T ss_dssp HGGGEEEEE
T ss_pred HHhcCCceE
Confidence 999999743
No 38
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.82 E-value=2.4e-20 Score=131.93 Aligned_cols=134 Identities=11% Similarity=0.063 Sum_probs=104.0
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------------------CCCeeEEecCCcccC--
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------------------TDNLKYIEGDMFQFI-- 71 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------------------~~~~~~~~~d~~~~~-- 71 (180)
++++.+|||+|||+|..+..+++. +.+++++|+|+ |++.+++ ..++++.++|+.+..
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 467889999999999999999998 66899999976 8888764 247899999996622
Q ss_pred --CCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCH
Q 030291 72 --PPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTE 149 (180)
Q Consensus 72 --~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (180)
++||+|++..+++|++++....++++++++||| ||.+++.......... ......++.
T Consensus 98 ~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkp---gG~~~l~~~~~~~~~~-----------------~~~~~~~~~ 157 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQ---ACSGLLITLEYDQALL-----------------EGPPFSVPQ 157 (203)
T ss_dssp HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCS---EEEEEEEEESSCSSSS-----------------SSCCCCCCH
T ss_pred cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCC---CcEEEEEEEecCcccc-----------------CCCCCCCCH
Confidence 469999999999999988777899999999999 8886665543321100 001123578
Q ss_pred HHHHHHHHHcCCeEEEEeec
Q 030291 150 QEWGSLFVNAGFTHYKIAPI 169 (180)
Q Consensus 150 ~~~~~~l~~aGf~~~~~~~~ 169 (180)
+++.+++++ ||++..+...
T Consensus 158 ~el~~~~~~-gf~i~~~~~~ 176 (203)
T 1pjz_A 158 TWLHRVMSG-NWEVTKVGGQ 176 (203)
T ss_dssp HHHHHTSCS-SEEEEEEEES
T ss_pred HHHHHHhcC-CcEEEEeccc
Confidence 999999998 9998776543
No 39
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.82 E-value=2.2e-20 Score=137.64 Aligned_cols=150 Identities=17% Similarity=0.331 Sum_probs=111.9
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCcc-cC--CCccEEEeccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQ-FI--PPSDAFFFKTV 82 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~-~~--~~~D~v~~~~~ 82 (180)
++++.+|||||||+|.++..+++.+|+.+++++|+++ +++.+++ ..++++.+.|+.+ +. ..||+|+++.+
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESC
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEech
Confidence 4678899999999999999999999899999999965 8887764 3579999999965 22 36999999999
Q ss_pred cccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCC---Cchhhhhhh-hccceeeEeecCCcccCHHHHHHHHHH
Q 030291 83 FHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKE---DDRELTESK-LLFDIFMNFNVGGKERTEQEWGSLFVN 158 (180)
Q Consensus 83 l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~ 158 (180)
++|+++.. .+++++.++|+| ||.+++.+....... ......... .... .....+...++..++.++|++
T Consensus 115 l~~~~~~~--~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~ 187 (276)
T 3mgg_A 115 LEHLQSPE--EALKSLKKVLKP---GGTITVIEGDHGSCYFHPEGKKAIEAWNCLIR--VQAYMKGNSLVGRQIYPLLQE 187 (276)
T ss_dssp GGGCSCHH--HHHHHHHHHEEE---EEEEEEEEECGGGCEEESCCHHHHHHHHHHHH--HHHHTTCCTTGGGGHHHHHHH
T ss_pred hhhcCCHH--HHHHHHHHHcCC---CcEEEEEEcCCCCceECCCcHHHHHHHHHHHH--HHHhcCCCcchHHHHHHHHHH
Confidence 99999988 789999999999 899999876432211 000010110 0000 001123345677899999999
Q ss_pred cCCeEEEEeec
Q 030291 159 AGFTHYKIAPI 169 (180)
Q Consensus 159 aGf~~~~~~~~ 169 (180)
+||+++++...
T Consensus 188 aGf~~v~~~~~ 198 (276)
T 3mgg_A 188 SGFEKIRVEPR 198 (276)
T ss_dssp TTCEEEEEEEE
T ss_pred CCCCeEEEeeE
Confidence 99999887644
No 40
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.82 E-value=1.7e-19 Score=132.45 Aligned_cols=143 Identities=15% Similarity=0.114 Sum_probs=111.1
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcc-cC--CCccEEEecc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQ-FI--PPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~-~~--~~~D~v~~~~ 81 (180)
++++.+|||||||+|.++..+++. +..+++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|++..
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~ 122 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEG 122 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcC
Confidence 567889999999999999999988 677999999966 8887764 3679999999965 22 3699999999
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCC
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGF 161 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 161 (180)
+++|+ +.. .+++++.++|+| ||.+++.+...............+. . ......+.+++.++++++||
T Consensus 123 ~~~~~-~~~--~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~l~~aGf 188 (267)
T 3kkz_A 123 AIYNI-GFE--RGLNEWRKYLKK---GGYLAVSECSWFTDERPAEINDFWM--D------AYPEIDTIPNQVAKIHKAGY 188 (267)
T ss_dssp CGGGT-CHH--HHHHHHGGGEEE---EEEEEEEEEEESSSCCCHHHHHHHH--H------HCTTCEEHHHHHHHHHHTTE
T ss_pred Cceec-CHH--HHHHHHHHHcCC---CCEEEEEEeeecCCCChHHHHHHHH--H------hCCCCCCHHHHHHHHHHCCC
Confidence 99999 554 789999999999 9999999887544433221111110 0 01245688999999999999
Q ss_pred eEEEEeecC
Q 030291 162 THYKIAPIF 170 (180)
Q Consensus 162 ~~~~~~~~~ 170 (180)
+++++...+
T Consensus 189 ~~v~~~~~~ 197 (267)
T 3kkz_A 189 LPVATFILP 197 (267)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEECC
Confidence 999887654
No 41
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.82 E-value=6.8e-20 Score=135.38 Aligned_cols=157 Identities=17% Similarity=0.137 Sum_probs=111.5
Q ss_pred cccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-CCCeeEEecCCcc-cC-CCccEEEe
Q 030291 4 LLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-TDNLKYIEGDMFQ-FI-PPSDAFFF 79 (180)
Q Consensus 4 ~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-~~~~~~~~~d~~~-~~-~~~D~v~~ 79 (180)
.+++.+. ..++.+|||||||+|.++..+++ ++.+++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|++
T Consensus 48 ~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~ 123 (279)
T 3ccf_A 48 DLLQLLN--PQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLDAVFS 123 (279)
T ss_dssp HHHHHHC--CCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEEEEEE
T ss_pred HHHHHhC--CCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcCEEEE
Confidence 3444554 56788999999999999999988 578999999966 8888775 4689999999855 22 36999999
Q ss_pred ccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCc-hhhhhhhhccce-eeEeecCCcccCHHHHHHHHH
Q 030291 80 KTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDD-RELTESKLLFDI-FMNFNVGGKERTEQEWGSLFV 157 (180)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~ 157 (180)
..+++|+++.. .++++++++|+| ||.+++........... ..+......... ..........++.+++.++++
T Consensus 124 ~~~l~~~~d~~--~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 198 (279)
T 3ccf_A 124 NAMLHWVKEPE--AAIASIHQALKS---GGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILE 198 (279)
T ss_dssp ESCGGGCSCHH--HHHHHHHHHEEE---EEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHH
T ss_pred cchhhhCcCHH--HHHHHHHHhcCC---CcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHH
Confidence 99999999887 789999999999 88888876543221000 000000000000 000011224568999999999
Q ss_pred HcCCeEEEEeec
Q 030291 158 NAGFTHYKIAPI 169 (180)
Q Consensus 158 ~aGf~~~~~~~~ 169 (180)
++||+++++...
T Consensus 199 ~aGf~~~~~~~~ 210 (279)
T 3ccf_A 199 KQGFDVTYAALF 210 (279)
T ss_dssp HHTEEEEEEEEE
T ss_pred HcCCEEEEEEEe
Confidence 999999877644
No 42
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.82 E-value=7.4e-20 Score=133.25 Aligned_cols=152 Identities=16% Similarity=0.138 Sum_probs=107.2
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC---CCCeeEEecCCcc-cC--CCccEEEecccccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ---TDNLKYIEGDMFQ-FI--PPSDAFFFKTVFHF 85 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~---~~~~~~~~~d~~~-~~--~~~D~v~~~~~l~~ 85 (180)
..++.+|||||||+|.++..+++..+. +++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|++..+++|
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 120 (253)
T 3g5l_A 42 DFNQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHY 120 (253)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGG
T ss_pred ccCCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhh
Confidence 346889999999999999999988543 899999966 8888765 4689999999965 22 36999999999999
Q ss_pred CChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCc--hh---------hhhhhhccceeeE--e----ecCCcccC
Q 030291 86 FDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDD--RE---------LTESKLLFDIFMN--F----NVGGKERT 148 (180)
Q Consensus 86 ~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~--~~---------~~~~~~~~~~~~~--~----~~~~~~~~ 148 (180)
+++.. .++++++++|+| ||.+++........... .. ............. . ......++
T Consensus 121 ~~~~~--~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 195 (253)
T 3g5l_A 121 IASFD--DICKKVYINLKS---SGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRT 195 (253)
T ss_dssp CSCHH--HHHHHHHHHEEE---EEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCC
T ss_pred hhhHH--HHHHHHHHHcCC---CcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecC
Confidence 98877 889999999999 88888875432110000 00 0000000000000 0 01112349
Q ss_pred HHHHHHHHHHcCCeEEEEeecC
Q 030291 149 EQEWGSLFVNAGFTHYKIAPIF 170 (180)
Q Consensus 149 ~~~~~~~l~~aGf~~~~~~~~~ 170 (180)
.++|.++|+++||+++++....
T Consensus 196 ~~~~~~~l~~aGF~~~~~~e~~ 217 (253)
T 3g5l_A 196 VTTYIQTLLKNGFQINSVIEPE 217 (253)
T ss_dssp HHHHHHHHHHTTEEEEEEECCC
T ss_pred HHHHHHHHHHcCCeeeeeecCC
Confidence 9999999999999999987653
No 43
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.82 E-value=6.6e-20 Score=132.74 Aligned_cols=146 Identities=14% Similarity=0.158 Sum_probs=107.3
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC--CCCeeEEecCCcccC--CCccEEEeccccccCCh
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ--TDNLKYIEGDMFQFI--PPSDAFFFKTVFHFFDD 88 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~--~~~~~~~~~d~~~~~--~~~D~v~~~~~l~~~~~ 88 (180)
.++.+|||||||+|.++..+++..+ +++++|+++ +++.+++ ..++++.++|+.+.. ..||+|++..+++|+++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~ 118 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIVLTHVLEHIDD 118 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEEEESCGGGCSS
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEEEhhHHHhhcC
Confidence 4577899999999999999988854 699999976 8888775 228999999986532 36999999999999998
Q ss_pred HHHHHHHHHHH-HhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccc-ee-----eEeecCCcccCHHHHHHHHHHcCC
Q 030291 89 EDCLKLLKKCR-EAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFD-IF-----MNFNVGGKERTEQEWGSLFVNAGF 161 (180)
Q Consensus 89 ~~~~~~l~~~~-~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~l~~aGf 161 (180)
+. .+|+++. ++|+| ||.+++..+........ ......... .. .....+.+.++.+++.++++++||
T Consensus 119 ~~--~~l~~~~~~~Lkp---gG~l~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 191 (250)
T 2p7i_A 119 PV--ALLKRINDDWLAE---GGRLFLVCPNANAVSRQ--IAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGL 191 (250)
T ss_dssp HH--HHHHHHHHTTEEE---EEEEEEEEECTTCHHHH--HHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTC
T ss_pred HH--HHHHHHHHHhcCC---CCEEEEEcCChHHHHHH--HHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCC
Confidence 87 8899999 99999 89999987654321100 000000000 00 001122356799999999999999
Q ss_pred eEEEEee
Q 030291 162 THYKIAP 168 (180)
Q Consensus 162 ~~~~~~~ 168 (180)
++++...
T Consensus 192 ~~~~~~~ 198 (250)
T 2p7i_A 192 QVTYRSG 198 (250)
T ss_dssp EEEEEEE
T ss_pred eEEEEee
Confidence 9988764
No 44
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.82 E-value=1.1e-19 Score=139.99 Aligned_cols=145 Identities=17% Similarity=0.249 Sum_probs=111.6
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHC-CCCeEEEeeCch-hhccCCCC--------------CCeeEEecCCcc-------
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAF-PGIKCTVLDLPH-AVTDMPQT--------------DNLKYIEGDMFQ------- 69 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~~~~D~~~-~~~~a~~~--------------~~~~~~~~d~~~------- 69 (180)
..++.+|||||||+|.++..+++.+ ++.+++++|+++ +++.+++. .++++.++|+.+
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 4578899999999999999999885 788999999966 88887642 689999999965
Q ss_pred cCC--CccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCccc
Q 030291 70 FIP--PSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKER 147 (180)
Q Consensus 70 ~~~--~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (180)
+.+ +||+|+++.+++|+++.. .++++++++||| ||.+++.+.......... ....... ........+
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~--~~l~~~~r~Lkp---gG~l~i~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~ 229 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKL--ALFKEIHRVLRD---GGELYFSDVYADRRLSEA-AQQDPIL-----YGECLGGAL 229 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHH--HHHHHHHHHEEE---EEEEEEEEEEESSCCCHH-HHHCHHH-----HHTTCTTCC
T ss_pred CCCCCCEEEEEEccchhcCCCHH--HHHHHHHHHcCC---CCEEEEEEeccccccCHh-HhhhHHH-----hhcccccCC
Confidence 222 699999999999999877 889999999999 999999887765433221 1110000 111123456
Q ss_pred CHHHHHHHHHHcCCeEEEEee
Q 030291 148 TEQEWGSLFVNAGFTHYKIAP 168 (180)
Q Consensus 148 ~~~~~~~~l~~aGf~~~~~~~ 168 (180)
+.++|.++++++||+.+++..
T Consensus 230 ~~~~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 230 YLEDFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp BHHHHHHHHHHTTCCCEEEEE
T ss_pred CHHHHHHHHHHCCCceEEEEe
Confidence 889999999999999886654
No 45
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.82 E-value=4.1e-19 Score=129.49 Aligned_cols=142 Identities=15% Similarity=0.128 Sum_probs=109.3
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcc-cC--CCccEEEecc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQ-FI--PPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~-~~--~~~D~v~~~~ 81 (180)
++++.+|||||||+|.++..+++..+. +++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|++..
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEG 122 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecC
Confidence 567789999999999999999999864 899999966 8887764 3459999999955 22 3699999999
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCC
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGF 161 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 161 (180)
+++|+ +.. .+++++.++|+| ||.+++.+...............+.. ......+.+++.++++++||
T Consensus 123 ~l~~~-~~~--~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~aGf 188 (257)
T 3f4k_A 123 AIYNI-GFE--RGMNEWSKYLKK---GGFIAVSEASWFTSERPAEIEDFWMD--------AYPEISVIPTCIDKMERAGY 188 (257)
T ss_dssp CSCCC-CHH--HHHHHHHTTEEE---EEEEEEEEEEESSSCCCHHHHHHHHH--------HCTTCCBHHHHHHHHHHTTE
T ss_pred hHhhc-CHH--HHHHHHHHHcCC---CcEEEEEEeeccCCCChHHHHHHHHH--------hCCCCCCHHHHHHHHHHCCC
Confidence 99999 444 789999999999 99999998765443322211111111 01235688999999999999
Q ss_pred eEEEEeec
Q 030291 162 THYKIAPI 169 (180)
Q Consensus 162 ~~~~~~~~ 169 (180)
++++....
T Consensus 189 ~~v~~~~~ 196 (257)
T 3f4k_A 189 TPTAHFIL 196 (257)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEC
Confidence 99987655
No 46
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.82 E-value=1.3e-19 Score=131.14 Aligned_cols=151 Identities=19% Similarity=0.284 Sum_probs=112.7
Q ss_pred cccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCcc-cC--CCcc
Q 030291 6 VKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQ-FI--PPSD 75 (180)
Q Consensus 6 ~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~-~~--~~~D 75 (180)
++.+. .+++.+|||||||+|.++..+++.. .+++++|+++ +++.+++ ..++++.++|+.+ +. ..||
T Consensus 14 ~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 89 (239)
T 1xxl_A 14 IKTAE--CRAEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFD 89 (239)
T ss_dssp HHHHT--CCTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEE
T ss_pred HHHhC--cCCCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEE
Confidence 34445 6788999999999999999998885 4799999966 8887764 2679999999855 22 3599
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHH
Q 030291 76 AFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSL 155 (180)
Q Consensus 76 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (180)
+|++..+++|+++.. .+++++.++|+| ||.+++.+...+.... ........... ....+.+.++.++|.++
T Consensus 90 ~v~~~~~l~~~~~~~--~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~l 160 (239)
T 1xxl_A 90 IITCRYAAHHFSDVR--KAVREVARVLKQ---DGRFLLVDHYAPEDPV---LDEFVNHLNRL-RDPSHVRESSLSEWQAM 160 (239)
T ss_dssp EEEEESCGGGCSCHH--HHHHHHHHHEEE---EEEEEEEEECBCSSHH---HHHHHHHHHHH-HCTTCCCCCBHHHHHHH
T ss_pred EEEECCchhhccCHH--HHHHHHHHHcCC---CcEEEEEEcCCCCChh---HHHHHHHHHHh-ccccccCCCCHHHHHHH
Confidence 999999999999887 789999999999 9999998876554311 11111100000 00122356789999999
Q ss_pred HHHcCCeEEEEeec
Q 030291 156 FVNAGFTHYKIAPI 169 (180)
Q Consensus 156 l~~aGf~~~~~~~~ 169 (180)
++++||+++++...
T Consensus 161 l~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 161 FSANQLAYQDIQKW 174 (239)
T ss_dssp HHHTTEEEEEEEEE
T ss_pred HHHCCCcEEEEEee
Confidence 99999998877654
No 47
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.81 E-value=6.8e-20 Score=137.76 Aligned_cols=160 Identities=18% Similarity=0.247 Sum_probs=116.3
Q ss_pred cccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcccCCCcc
Q 030291 4 LLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQFIPPSD 75 (180)
Q Consensus 4 ~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~~~~~D 75 (180)
.+++.+. +.++.+|||||||+|.++..+++.+ +++++++|+++ +++.+++ ..++++.++|+.+....||
T Consensus 81 ~~~~~~~--~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD 157 (318)
T 2fk8_A 81 LNLDKLD--LKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVD 157 (318)
T ss_dssp HHHTTSC--CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCS
T ss_pred HHHHhcC--CCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcC
Confidence 3445555 6778899999999999999999886 66999999966 8887764 2569999999955445799
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCch----hhh-hhhhccce-eeEeecCCcccCH
Q 030291 76 AFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDR----ELT-ESKLLFDI-FMNFNVGGKERTE 149 (180)
Q Consensus 76 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~----~~~-~~~~~~~~-~~~~~~~~~~~~~ 149 (180)
+|++..+++|++++....+++++.++|+| ||.+++.++......... .+. ......+. ......++...+.
T Consensus 158 ~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 234 (318)
T 2fk8_A 158 RIVSIEAFEHFGHENYDDFFKRCFNIMPA---DGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPST 234 (318)
T ss_dssp EEEEESCGGGTCGGGHHHHHHHHHHHSCT---TCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCH
T ss_pred EEEEeChHHhcCHHHHHHHHHHHHHhcCC---CcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCH
Confidence 99999999999766566899999999999 999999888765421100 000 00000000 0001123456799
Q ss_pred HHHHHHHHHcCCeEEEEeec
Q 030291 150 QEWGSLFVNAGFTHYKIAPI 169 (180)
Q Consensus 150 ~~~~~~l~~aGf~~~~~~~~ 169 (180)
+++.++++++||+++++...
T Consensus 235 ~~~~~~l~~aGf~~~~~~~~ 254 (318)
T 2fk8_A 235 EMMVEHGEKAGFTVPEPLSL 254 (318)
T ss_dssp HHHHHHHHHTTCBCCCCEEC
T ss_pred HHHHHHHHhCCCEEEEEEec
Confidence 99999999999998876654
No 48
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.81 E-value=6.5e-20 Score=135.83 Aligned_cols=151 Identities=16% Similarity=0.176 Sum_probs=110.2
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcccC----CCccEEEeccc
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQFI----PPSDAFFFKTV 82 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~~----~~~D~v~~~~~ 82 (180)
++.+|||||||+|.++..+++. +.+++++|+++ +++.+++ ..++++.++|+.+.. ..||+|++..+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 4679999999999999999988 67899999966 8888875 168999999996532 36999999999
Q ss_pred cccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhh----h-hhhccceeeEeecCCcccCHHHHHHHHH
Q 030291 83 FHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELT----E-SKLLFDIFMNFNVGGKERTEQEWGSLFV 157 (180)
Q Consensus 83 l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 157 (180)
++|++++. .+++++.++|+| ||.+++............... . .................++.+++.++++
T Consensus 146 l~~~~~~~--~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 220 (285)
T 4htf_A 146 LEWVADPR--SVLQTLWSVLRP---GGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLE 220 (285)
T ss_dssp GGGCSCHH--HHHHHHHHTEEE---EEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHH
T ss_pred hhcccCHH--HHHHHHHHHcCC---CeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHH
Confidence 99999887 789999999999 899888876543211000000 0 0000000011112335679999999999
Q ss_pred HcCCeEEEEeecCCc
Q 030291 158 NAGFTHYKIAPIFGI 172 (180)
Q Consensus 158 ~aGf~~~~~~~~~~~ 172 (180)
++||+++++.....+
T Consensus 221 ~aGf~v~~~~~~~~~ 235 (285)
T 4htf_A 221 EAGWQIMGKTGVRVF 235 (285)
T ss_dssp HTTCEEEEEEEESSS
T ss_pred HCCCceeeeeeEEEe
Confidence 999999988766443
No 49
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.81 E-value=2.1e-19 Score=130.08 Aligned_cols=139 Identities=15% Similarity=0.243 Sum_probs=108.9
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCccc-C--CCccEEEeccccc
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQF-I--PPSDAFFFKTVFH 84 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~-~--~~~D~v~~~~~l~ 84 (180)
++.+|||||||+|.++..+++.. ..+++++|+++ +++.+++ ..++++.++|+.+. . ..||+|++..+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 57899999999999999988876 56899999966 8887764 23588999998552 2 2599999999999
Q ss_pred cCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEE
Q 030291 85 FFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHY 164 (180)
Q Consensus 85 ~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 164 (180)
|++++....+++++.++|+| ||.+++.+...... . .++ ...+...++.+++.++++++||+++
T Consensus 158 ~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~--~--------~~~----~~~~~~~~~~~~~~~~l~~aGf~~~ 220 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRP---NGIIVIKDNMAQEG--V--------ILD----DVDSSVCRDLDVVRRIICSAGLSLL 220 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEE---EEEEEEEEEEBSSS--E--------EEE----TTTTEEEEBHHHHHHHHHHTTCCEE
T ss_pred hCCHHHHHHHHHHHHHhcCC---CeEEEEEEccCCCc--c--------eec----ccCCcccCCHHHHHHHHHHcCCeEE
Confidence 99998777899999999999 99999988765431 0 000 0011123588999999999999999
Q ss_pred EEeecCC
Q 030291 165 KIAPIFG 171 (180)
Q Consensus 165 ~~~~~~~ 171 (180)
+.....+
T Consensus 221 ~~~~~~~ 227 (241)
T 2ex4_A 221 AEERQEN 227 (241)
T ss_dssp EEEECCS
T ss_pred EeeecCC
Confidence 8876543
No 50
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.81 E-value=5.9e-19 Score=127.21 Aligned_cols=162 Identities=17% Similarity=0.177 Sum_probs=113.6
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-CCCeeEEecCCccc-C-CCccEEEe-ccccccCCh
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-TDNLKYIEGDMFQF-I-PPSDAFFF-KTVFHFFDD 88 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-~~~~~~~~~d~~~~-~-~~~D~v~~-~~~l~~~~~ 88 (180)
+++.+|||+|||+|.++..+++.++ +++++|+++ +++.+++ ..++++.++|+.+. . ..||+|++ ..+++|+++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~~ 116 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVSMFSSVGYLKT 116 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEECTTGGGGCCS
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEEcCchHhhcCC
Confidence 5678999999999999999999864 799999965 8888875 46799999999652 2 36999995 559999965
Q ss_pred -HHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhh--------------------hhhccceeeEee------
Q 030291 89 -EDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTE--------------------SKLLFDIFMNFN------ 141 (180)
Q Consensus 89 -~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~------ 141 (180)
.....+++++.++|+| ||.+++.+...+.......... ............
T Consensus 117 ~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (239)
T 3bxo_A 117 TEELGAAVASFAEHLEP---GGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTVADPGKGV 193 (239)
T ss_dssp HHHHHHHHHHHHHTEEE---EEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEE
T ss_pred HHHHHHHHHHHHHhcCC---CeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEEecCCCcc
Confidence 4566899999999999 8888887654433211000000 000000000000
Q ss_pred ------cCCcccCHHHHHHHHHHcCCeEEEEeecCCceeEEEEeC
Q 030291 142 ------VGGKERTEQEWGSLFVNAGFTHYKIAPIFGIKSLIEVYP 180 (180)
Q Consensus 142 ------~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~ 180 (180)
...+.++.++|.++|+++||+++.+....+...++.++|
T Consensus 194 ~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~~va~K 238 (239)
T 3bxo_A 194 RHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGLFVGVP 238 (239)
T ss_dssp EEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred eEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceEEEEec
Confidence 112457999999999999998888877766666666553
No 51
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.80 E-value=3.6e-19 Score=127.37 Aligned_cols=162 Identities=14% Similarity=0.162 Sum_probs=113.2
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCcc-cC--CCccEEEecccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQ-FI--PPSDAFFFKTVF 83 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~-~~--~~~D~v~~~~~l 83 (180)
++++.+|||+|||+|.++..+++..+ +++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|+++.++
T Consensus 36 ~~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~ 113 (227)
T 1ve3_A 36 MKKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSI 113 (227)
T ss_dssp CCSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCG
T ss_pred cCCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCch
Confidence 34578999999999999999988865 899999965 8887764 3789999999965 32 369999999996
Q ss_pred ccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCch--h-hhhhhhccceeeE---------e-ec-------C
Q 030291 84 HFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDR--E-LTESKLLFDIFMN---------F-NV-------G 143 (180)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~---------~-~~-------~ 143 (180)
++........+++++.++|+| ||.+++.+.......... . ............. . .. .
T Consensus 114 ~~~~~~~~~~~l~~~~~~L~~---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (227)
T 1ve3_A 114 VHFEPLELNQVFKEVRRVLKP---SGKFIMYFTDLRELLPRLKESLVVGQKYWISKVIPDQEERTVVIEFKSEQDSFRVR 190 (227)
T ss_dssp GGCCHHHHHHHHHHHHHHEEE---EEEEEEEEECHHHHGGGCCC---------CCEEEEETTTTEEEEEC-----CCEEE
T ss_pred HhCCHHHHHHHHHHHHHHcCC---CcEEEEEecChHHHHHHHHhhhhcccceeecccccCccccEEEEEeccchhhheee
Confidence 666555556899999999999 899998876532211100 0 0000000000000 0 00 0
Q ss_pred CcccCHHHHHHHHHHcCCeEEEEeecCCceeEEEEeC
Q 030291 144 GKERTEQEWGSLFVNAGFTHYKIAPIFGIKSLIEVYP 180 (180)
Q Consensus 144 ~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~ 180 (180)
...+. .++.++++++||+.+++...+....+++++|
T Consensus 191 ~~~w~-~~~~~~l~~~GF~~v~~~~~~~~~~~i~~~~ 226 (227)
T 1ve3_A 191 FNVWG-KTGVELLAKLYFTKEAEEKVGNYSYLTVYNP 226 (227)
T ss_dssp EECCC-HHHHHHHHTTTEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhc-hHHHHHHHHHhhhHHHHHHhCCceeEEeeCC
Confidence 01122 4789999999999999999988888999876
No 52
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.80 E-value=9.7e-20 Score=129.80 Aligned_cols=143 Identities=13% Similarity=0.070 Sum_probs=102.2
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCCC-----------CCeeEEecCCccc---CCCccEE
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQT-----------DNLKYIEGDMFQF---IPPSDAF 77 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~-----------~~~~~~~~d~~~~---~~~~D~v 77 (180)
..++.+|||||||+|.++..+++..+..+++++|+++ +++.+++. .++++.++|+... ...||+|
T Consensus 27 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 106 (217)
T 3jwh_A 27 QSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAA 106 (217)
T ss_dssp HTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEE
T ss_pred hcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEE
Confidence 4567899999999999999999988778999999966 88877641 2799999998442 2369999
Q ss_pred EeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccce-eeEeecCCcccCHHHHH---
Q 030291 78 FFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDI-FMNFNVGGKERTEQEWG--- 153 (180)
Q Consensus 78 ~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--- 153 (180)
++..+++|++++....+++++.++|+| ||.+++... .... ........ ..........++.+++.
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~li~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 175 (217)
T 3jwh_A 107 TVIEVIEHLDLSRLGAFERVLFEFAQP---KIVIVTTPN-IEYN-------VKFANLPAGKLRHKDHRFEWTRSQFQNWA 175 (217)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCC---SEEEEEEEB-HHHH-------HHTC-----------CCSCBCHHHHHHHH
T ss_pred eeHHHHHcCCHHHHHHHHHHHHHHcCC---CEEEEEccC-cccc-------hhhcccccccccccccccccCHHHHHHHH
Confidence 999999999988777999999999999 775554432 1100 00000000 00011222446888888
Q ss_pred -HHHHHcCCeEEEE
Q 030291 154 -SLFVNAGFTHYKI 166 (180)
Q Consensus 154 -~~l~~aGf~~~~~ 166 (180)
++++++||++...
T Consensus 176 ~~~~~~~Gf~v~~~ 189 (217)
T 3jwh_A 176 NKITERFAYNVQFQ 189 (217)
T ss_dssp HHHHHHSSEEEEEC
T ss_pred HHHHHHcCceEEEE
Confidence 8999999987544
No 53
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.80 E-value=2.3e-19 Score=134.23 Aligned_cols=153 Identities=14% Similarity=0.144 Sum_probs=110.0
Q ss_pred ccCCCeEEEeCCcccHHHHHHH-HHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCccc--CCCccEEEecc
Q 030291 13 FQGLRSMVDVGGGTGAFARIIS-EAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQF--IPPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~-~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~--~~~~D~v~~~~ 81 (180)
++++.+|||||||+|..+..++ ...++.+++++|+++ +++.+++ ..++++.++|+.+. ...||+|+++.
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~ 195 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNG 195 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECC
Confidence 5678899999999999999885 567789999999965 8887764 23599999999652 24699999999
Q ss_pred ccccCChHH-HHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchh------hhh-----hhhccceeeEeecCCcccCH
Q 030291 82 VFHFFDDED-CLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRE------LTE-----SKLLFDIFMNFNVGGKERTE 149 (180)
Q Consensus 82 ~l~~~~~~~-~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~------~~~-----~~~~~~~~~~~~~~~~~~~~ 149 (180)
+++|++++. ...+++++.++|+| ||.+++.+...+....... ... ....+... ........++.
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 271 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKP---GGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRL-IQPRWNALRTH 271 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEE---EEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHT-TCCSCCCCCCH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCC---CeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHH-HhhhhhccCCH
Confidence 999997665 34589999999999 8999887765433221100 000 00000000 00001145799
Q ss_pred HHHHHHHHHcCCeEEEEeec
Q 030291 150 QEWGSLFVNAGFTHYKIAPI 169 (180)
Q Consensus 150 ~~~~~~l~~aGf~~~~~~~~ 169 (180)
+++.++++++||+++++...
T Consensus 272 ~~~~~~l~~aGF~~v~~~~~ 291 (305)
T 3ocj_A 272 AQTRAQLEEAGFTDLRFEDD 291 (305)
T ss_dssp HHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHCCCEEEEEEcc
Confidence 99999999999999998865
No 54
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.80 E-value=1.8e-19 Score=128.55 Aligned_cols=144 Identities=13% Similarity=0.125 Sum_probs=102.9
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCCC-----------CCeeEEecCCccc---CCCccEE
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQT-----------DNLKYIEGDMFQF---IPPSDAF 77 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~-----------~~~~~~~~d~~~~---~~~~D~v 77 (180)
..++.+|||||||+|.++..+++..+..+++++|+++ +++.+++. .++++.++|+... ...||+|
T Consensus 27 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V 106 (219)
T 3jwg_A 27 SVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAA 106 (219)
T ss_dssp HTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEE
T ss_pred hcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEE
Confidence 3567899999999999999999988778999999966 88888641 2899999998442 2369999
Q ss_pred EeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHH----
Q 030291 78 FFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWG---- 153 (180)
Q Consensus 78 ~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 153 (180)
++..+++|++++....+++++.++|+| || +++............ . ..............++.+++.
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG-~~i~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~l~~~~~ 176 (219)
T 3jwg_A 107 TVIEVIEHLDENRLQAFEKVLFEFTRP---QT-VIVSTPNKEYNFHYG---N---LFEGNLRHRDHRFEWTRKEFQTWAV 176 (219)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCC---SE-EEEEEEBGGGGGCCC---C---T-----GGGCCTTSBCHHHHHHHHH
T ss_pred EEHHHHHhCCHHHHHHHHHHHHHhhCC---CE-EEEEccchhhhhhhc---c---cCcccccccCceeeecHHHHHHHHH
Confidence 999999999988777999999999999 77 444443322110000 0 000000001122346888888
Q ss_pred HHHHHcCCeEEEE
Q 030291 154 SLFVNAGFTHYKI 166 (180)
Q Consensus 154 ~~l~~aGf~~~~~ 166 (180)
++++++||++...
T Consensus 177 ~l~~~~Gf~v~~~ 189 (219)
T 3jwg_A 177 KVAEKYGYSVRFL 189 (219)
T ss_dssp HHHHHHTEEEEEE
T ss_pred HHHHHCCcEEEEE
Confidence 8899999976554
No 55
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.80 E-value=4.1e-19 Score=130.05 Aligned_cols=149 Identities=12% Similarity=0.186 Sum_probs=110.8
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcc-cC--CCccEEEec
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQ-FI--PPSDAFFFK 80 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~-~~--~~~D~v~~~ 80 (180)
+++.+. ..++.+|||||||+|.++..+++ ++.+++++|+++ +++.+++..++++.++|+.+ +. ..||+|++.
T Consensus 26 l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 101 (261)
T 3ege_A 26 IINLLN--LPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISI 101 (261)
T ss_dssp HHHHHC--CCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEE
T ss_pred HHHHhC--CCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEc
Confidence 344444 56789999999999999999987 578999999976 99999887799999999965 32 369999999
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcC
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAG 160 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 160 (180)
.+++|+++.. .+++++.++|| ||.+++.+.......... .. ..... .....+..+.+.+++. +++++|
T Consensus 102 ~~l~~~~~~~--~~l~~~~~~Lk----gG~~~~~~~~~~~~~~~~-~~---~~~~~-~~~~~~~~~~~~~~~~-~l~~aG 169 (261)
T 3ege_A 102 LAIHHFSHLE--KSFQEMQRIIR----DGTIVLLTFDIRLAQRIW-LY---DYFPF-LWEDALRFLPLDEQIN-LLQENT 169 (261)
T ss_dssp SCGGGCSSHH--HHHHHHHHHBC----SSCEEEEEECGGGCCCCG-GG---GTCHH-HHHHHHTSCCHHHHHH-HHHHHH
T ss_pred chHhhccCHH--HHHHHHHHHhC----CcEEEEEEcCCchhHHHH-HH---HHHHH-HhhhhhhhCCCHHHHH-HHHHcC
Confidence 9999998887 88999999999 398888887543322110 00 00000 0001123455778888 999999
Q ss_pred CeEEEEeec
Q 030291 161 FTHYKIAPI 169 (180)
Q Consensus 161 f~~~~~~~~ 169 (180)
|+.+++...
T Consensus 170 F~~v~~~~~ 178 (261)
T 3ege_A 170 KRRVEAIPF 178 (261)
T ss_dssp CSEEEEEEC
T ss_pred CCceeEEEe
Confidence 998887654
No 56
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.79 E-value=2.5e-19 Score=129.11 Aligned_cols=132 Identities=17% Similarity=0.222 Sum_probs=105.0
Q ss_pred CCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcccCC--CccEEEecccccc
Q 030291 16 LRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQFIP--PSDAFFFKTVFHF 85 (180)
Q Consensus 16 ~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~~~--~~D~v~~~~~l~~ 85 (180)
+.+|||||||+|.++..+++ ++.+++++|+++ +++.+++ ..++++.++|+.+..+ .||+|++..+++|
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCA 144 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTT
T ss_pred CCCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhc
Confidence 45999999999999998876 377899999966 8887764 2469999999976333 6999999999999
Q ss_pred CChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEEE
Q 030291 86 FDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHYK 165 (180)
Q Consensus 86 ~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 165 (180)
+++.....+++++.++|+| ||.+++.+........ .....++.+++.++++++||++++
T Consensus 145 ~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~------------------~~~~~~~~~~~~~~l~~~Gf~~~~ 203 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLKP---DGELITLMYPITDHVG------------------GPPYKVDVSTFEEVLVPIGFKAVS 203 (235)
T ss_dssp SCGGGHHHHHHHHHHHEEE---EEEEEEEECCCSCCCS------------------CSSCCCCHHHHHHHHGGGTEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCC---CcEEEEEEecccccCC------------------CCCccCCHHHHHHHHHHcCCeEEE
Confidence 9966666999999999999 8988887754332111 011236889999999999999998
Q ss_pred EeecC
Q 030291 166 IAPIF 170 (180)
Q Consensus 166 ~~~~~ 170 (180)
+....
T Consensus 204 ~~~~~ 208 (235)
T 3lcc_A 204 VEENP 208 (235)
T ss_dssp EEECT
T ss_pred EEecC
Confidence 87653
No 57
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.79 E-value=7.9e-20 Score=136.00 Aligned_cols=156 Identities=15% Similarity=0.257 Sum_probs=107.8
Q ss_pred cccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCCC-------------------------
Q 030291 4 LLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQT------------------------- 57 (180)
Q Consensus 4 ~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~------------------------- 57 (180)
.+++.+...+..+.+|||||||+|.++..+++.++..+++++|+++ +++.|++.
T Consensus 35 ~~l~~l~~~~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (292)
T 3g07_A 35 GRLRVLKPEWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGE 114 (292)
T ss_dssp GGGGTSCGGGTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC------------------------
T ss_pred HHHHhhhhhhcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccc
Confidence 3444554334468899999999999999999999889999999966 77777531
Q ss_pred ---------------------------------------CCeeEEecCCccc--------CCCccEEEeccccccC----
Q 030291 58 ---------------------------------------DNLKYIEGDMFQF--------IPPSDAFFFKTVFHFF---- 86 (180)
Q Consensus 58 ---------------------------------------~~~~~~~~d~~~~--------~~~~D~v~~~~~l~~~---- 86 (180)
.++++.++|+... .+.||+|++..+++|+
T Consensus 115 ~~~~~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~ 194 (292)
T 3g07_A 115 EGTTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNW 194 (292)
T ss_dssp ---------------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHH
T ss_pred cccccccccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcC
Confidence 4899999999642 2469999999999887
Q ss_pred ChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHH--cCCeEE
Q 030291 87 DDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVN--AGFTHY 164 (180)
Q Consensus 87 ~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--aGf~~~ 164 (180)
.+.....++++++++|+| ||.+++....... +.......... ......-.+.++++.++|.+ +||+.+
T Consensus 195 ~~~~~~~~l~~~~~~Lkp---GG~lil~~~~~~~------y~~~~~~~~~~-~~~~~~~~~~p~~~~~~L~~~~~GF~~~ 264 (292)
T 3g07_A 195 GDEGLKRMFRRIYRHLRP---GGILVLEPQPWSS------YGKRKTLTETI-YKNYYRIQLKPEQFSSYLTSPDVGFSSY 264 (292)
T ss_dssp HHHHHHHHHHHHHHHEEE---EEEEEEECCCHHH------HHTTTTSCHHH-HHHHHHCCCCGGGHHHHHTSTTTCCCEE
T ss_pred CHHHHHHHHHHHHHHhCC---CcEEEEecCCchh------hhhhhcccHHH-HhhhhcEEEcHHHHHHHHHhcCCCceEE
Confidence 455666899999999999 7777774322110 10100000000 00000112357899999999 999888
Q ss_pred EEeec
Q 030291 165 KIAPI 169 (180)
Q Consensus 165 ~~~~~ 169 (180)
++...
T Consensus 265 ~~~~~ 269 (292)
T 3g07_A 265 ELVAT 269 (292)
T ss_dssp EEC--
T ss_pred EEecc
Confidence 77654
No 58
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.79 E-value=5.7e-19 Score=126.13 Aligned_cols=147 Identities=16% Similarity=0.100 Sum_probs=107.0
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCccc------CC-CccEEEeccccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQF------IP-PSDAFFFKTVFH 84 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~------~~-~~D~v~~~~~l~ 84 (180)
..++.+|||||||+|.++..+++. +.+++++|+++ +++.+++..++.+.+.|+.+. .. .||+|++..+++
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~ 127 (227)
T 3e8s_A 50 GRQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL 127 (227)
T ss_dssp HTCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC
T ss_pred cCCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh
Confidence 456799999999999999999888 66899999966 888888777888888887442 12 499999999999
Q ss_pred cCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceee----EeecCCcccCHHHHHHHHHHcC
Q 030291 85 FFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFM----NFNVGGKERTEQEWGSLFVNAG 160 (180)
Q Consensus 85 ~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~aG 160 (180)
..+.. .++++++++|+| ||.+++.+.......... +...+....... ........++.++|.++++++|
T Consensus 128 -~~~~~--~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 200 (227)
T 3e8s_A 128 -HQDII--ELLSAMRTLLVP---GGALVIQTLHPWSVADGD-YQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAG 200 (227)
T ss_dssp -SSCCH--HHHHHHHHTEEE---EEEEEEEECCTTTTCTTC-CSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTT
T ss_pred -hhhHH--HHHHHHHHHhCC---CeEEEEEecCccccCccc-cccccchhhhhccccCcccceEEEecHHHHHHHHHHcC
Confidence 66666 789999999999 899998876554332110 000000000000 0011124569999999999999
Q ss_pred CeEEEEee
Q 030291 161 FTHYKIAP 168 (180)
Q Consensus 161 f~~~~~~~ 168 (180)
|+++++..
T Consensus 201 f~~~~~~~ 208 (227)
T 3e8s_A 201 LRLVSLQE 208 (227)
T ss_dssp EEEEEEEC
T ss_pred CeEEEEec
Confidence 99998875
No 59
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.79 E-value=9.1e-19 Score=125.79 Aligned_cols=151 Identities=12% Similarity=0.110 Sum_probs=108.7
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----------CCCeeEEecCCcc-c--CCCccEE
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----------TDNLKYIEGDMFQ-F--IPPSDAF 77 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----------~~~~~~~~~d~~~-~--~~~~D~v 77 (180)
++++.+|||+|||+|.++..+++. +.+++++|+++ +++.+++ ..++++.++|+.+ + ...||+|
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 105 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFA 105 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEE
Confidence 467889999999999999999988 67899999965 7777754 1257999999865 2 2369999
Q ss_pred EeccccccCChHH-HHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhh--h-hhhc--cceeeEe-------ecCC
Q 030291 78 FFKTVFHFFDDED-CLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELT--E-SKLL--FDIFMNF-------NVGG 144 (180)
Q Consensus 78 ~~~~~l~~~~~~~-~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~--~-~~~~--~~~~~~~-------~~~~ 144 (180)
++..+++|++++. ...+++++.++|+| ||.+++.+............. . .... ...+... ....
T Consensus 106 ~~~~~l~~~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (235)
T 3sm3_A 106 VMQAFLTSVPDPKERSRIIKEVFRVLKP---GAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIA 182 (235)
T ss_dssp EEESCGGGCCCHHHHHHHHHHHHHHEEE---EEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEE
T ss_pred EEcchhhcCCCHHHHHHHHHHHHHHcCC---CeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceee
Confidence 9999999998754 55789999999999 999999887653322110000 0 0000 0000000 1112
Q ss_pred cccCHHHHHHHHHHcCCeEEEEee
Q 030291 145 KERTEQEWGSLFVNAGFTHYKIAP 168 (180)
Q Consensus 145 ~~~~~~~~~~~l~~aGf~~~~~~~ 168 (180)
+.++.+++.++++++||+++++..
T Consensus 183 ~~~~~~~l~~ll~~aGf~~~~~~~ 206 (235)
T 3sm3_A 183 HHFTEKELVFLLTDCRFEIDYFRV 206 (235)
T ss_dssp ECBCHHHHHHHHHTTTEEEEEEEE
T ss_pred EeCCHHHHHHHHHHcCCEEEEEEe
Confidence 467999999999999999988764
No 60
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.78 E-value=6.4e-19 Score=130.53 Aligned_cols=150 Identities=17% Similarity=0.248 Sum_probs=108.7
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCC-CCeEEEeeCch-hhccCCC-----CCCeeEEecCCcc-cC-CCccEEEecccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFP-GIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQ-FI-PPSDAFFFKTVF 83 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~-~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~-~~-~~~D~v~~~~~l 83 (180)
+.++.+|||||||+|.++..+++.+| +.+++++|+++ +++.+++ ..++++.++|+.+ +. .+||+|++..++
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l 99 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDIAICHAFL 99 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCEEEEEEESCG
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCeeEEEECChh
Confidence 56789999999999999999999987 48999999966 8877764 3489999999965 22 359999999999
Q ss_pred ccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeee-----C---CCCCchh---hhhhhhccceeeEeecCCcccCHHHH
Q 030291 84 HFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVI-----D---EKEDDRE---LTESKLLFDIFMNFNVGGKERTEQEW 152 (180)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~-----~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (180)
+|+++.. .++++++++|+| ||.+++.++.. . ....... .......+.. .....+....+.+++
T Consensus 100 ~~~~~~~--~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 173 (284)
T 3gu3_A 100 LHMTTPE--TMLQKMIHSVKK---GGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFES-DTQRNGKDGNIGMKI 173 (284)
T ss_dssp GGCSSHH--HHHHHHHHTEEE---EEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHH-HHHHTCCCTTGGGTH
T ss_pred hcCCCHH--HHHHHHHHHcCC---CCEEEEEecchhcccccceecCcchhhccchHHHHHHHHH-HhhhhcccccHHHHH
Confidence 9999887 889999999999 99999988651 1 0000000 0000000000 000122344567789
Q ss_pred HHHHHHcCCeEEEEee
Q 030291 153 GSLFVNAGFTHYKIAP 168 (180)
Q Consensus 153 ~~~l~~aGf~~~~~~~ 168 (180)
.++++++||+.++...
T Consensus 174 ~~~l~~aGF~~v~~~~ 189 (284)
T 3gu3_A 174 PIYLSELGVKNIECRV 189 (284)
T ss_dssp HHHHHHTTCEEEEEEE
T ss_pred HHHHHHcCCCeEEEEE
Confidence 9999999999887743
No 61
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.78 E-value=2.8e-19 Score=133.30 Aligned_cols=151 Identities=17% Similarity=0.218 Sum_probs=107.1
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----C----CCeeEEecCCcc-c-CCCccEEEec-c
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----T----DNLKYIEGDMFQ-F-IPPSDAFFFK-T 81 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~----~~~~~~~~d~~~-~-~~~~D~v~~~-~ 81 (180)
.+.+|||||||+|.++..+++. +.+++++|+++ +++.+++ . .++++.++|+.+ + ...||+|++. .
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~ 159 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDKRFGTVVISSG 159 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSCCEEEEEECHH
T ss_pred CCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCCCcCEEEECCc
Confidence 3459999999999999999988 56899999966 8888875 1 679999999966 2 2369998865 6
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCc-----hhhh-------hhhhccc-------ee-----
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDD-----RELT-------ESKLLFD-------IF----- 137 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~-----~~~~-------~~~~~~~-------~~----- 137 (180)
+++++++.....+|+++.++|+| ||.+++........... ..+. ....... ..
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 3g2m_A 160 SINELDEADRRGLYASVREHLEP---GGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQEITIHPAD 236 (299)
T ss_dssp HHTTSCHHHHHHHHHHHHHHEEE---EEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEEEEEEEESC
T ss_pred ccccCCHHHHHHHHHHHHHHcCC---CcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEEEEEEEecc
Confidence 78888877777999999999999 88888877654321000 0000 0000000 00
Q ss_pred ------eEeecCCcccCHHHHHHHHHHcCCeEEEEeecC
Q 030291 138 ------MNFNVGGKERTEQEWGSLFVNAGFTHYKIAPIF 170 (180)
Q Consensus 138 ------~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 170 (180)
.......+.++.+++.++|+++||+++++....
T Consensus 237 ~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~ 275 (299)
T 3g2m_A 237 ETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFA 275 (299)
T ss_dssp C--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEEC
T ss_pred CCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecC
Confidence 000011245799999999999999999998764
No 62
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.78 E-value=2.4e-18 Score=129.02 Aligned_cols=144 Identities=12% Similarity=0.130 Sum_probs=109.6
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcc-cC--CCccEEEecc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQ-FI--PPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~-~~--~~~D~v~~~~ 81 (180)
++++.+|||||||+|.++..+++.+ +.+++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|++..
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 193 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNE 193 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEES
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECC
Confidence 4678899999999999999999886 67899999965 8888764 2579999999965 22 3699999999
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCC
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGF 161 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 161 (180)
+++|++ .. .+++++.++|+| ||.+++.+.......... .......... .....++.+++.++++++||
T Consensus 194 ~l~~~~-~~--~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~s~~~~~~~l~~aGf 261 (312)
T 3vc1_A 194 STMYVD-LH--DLFSEHSRFLKV---GGRYVTITGCWNPRYGQP--SKWVSQINAH----FECNIHSRREYLRAMADNRL 261 (312)
T ss_dssp CGGGSC-HH--HHHHHHHHHEEE---EEEEEEEEEEECTTTCSC--CHHHHHHHHH----HTCCCCBHHHHHHHHHTTTE
T ss_pred chhhCC-HH--HHHHHHHHHcCC---CcEEEEEEccccccccch--hHHHHHHHhh----hcCCCCCHHHHHHHHHHCCC
Confidence 999994 44 889999999999 999999887765533110 0000000000 01135689999999999999
Q ss_pred eEEEEeec
Q 030291 162 THYKIAPI 169 (180)
Q Consensus 162 ~~~~~~~~ 169 (180)
+++++...
T Consensus 262 ~~~~~~~~ 269 (312)
T 3vc1_A 262 VPHTIVDL 269 (312)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 99988765
No 63
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.78 E-value=1.3e-18 Score=127.99 Aligned_cols=157 Identities=10% Similarity=0.102 Sum_probs=112.6
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHC-CCCeEEEeeCch-------hhccCCC-------CCCeeEEecC-Cc
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAF-PGIKCTVLDLPH-------AVTDMPQ-------TDNLKYIEGD-MF 68 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~~~~D~~~-------~~~~a~~-------~~~~~~~~~d-~~ 68 (180)
+++.+. ++++.+|||||||+|.++..+++.+ |..+++++|+++ +++.+++ ..++++.++| +.
T Consensus 35 l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 112 (275)
T 3bkx_A 35 IAEAWQ--VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLS 112 (275)
T ss_dssp HHHHHT--CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTT
T ss_pred HHHHcC--CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhh
Confidence 444555 6788999999999999999999885 668999999954 6666653 2579999998 42
Q ss_pred c---c--CCCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhh-----hhccceee
Q 030291 69 Q---F--IPPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTES-----KLLFDIFM 138 (180)
Q Consensus 69 ~---~--~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 138 (180)
. + ...||+|++..+++|++++. .+++.++++++| ||.+++.+.......... .... ........
T Consensus 113 ~~~~~~~~~~fD~v~~~~~l~~~~~~~--~~~~~~~~l~~~---gG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 186 (275)
T 3bkx_A 113 DDLGPIADQHFDRVVLAHSLWYFASAN--ALALLFKNMAAV---CDHVDVAEWSMQPTALDQ-IGHLQAAMIQGLLYAIA 186 (275)
T ss_dssp TCCGGGTTCCCSEEEEESCGGGSSCHH--HHHHHHHHHTTT---CSEEEEEEECSSCSSGGG-HHHHHHHHHHHHHHHHS
T ss_pred hccCCCCCCCEEEEEEccchhhCCCHH--HHHHHHHHHhCC---CCEEEEEEecCCCCchhh-hhHHHHHHHHHHHhhcc
Confidence 2 2 23699999999999999887 578888888888 899999988765442211 1010 00000000
Q ss_pred E--eecCCcccCHHHHHHHHHHcCCeEEEEeec
Q 030291 139 N--FNVGGKERTEQEWGSLFVNAGFTHYKIAPI 169 (180)
Q Consensus 139 ~--~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 169 (180)
. .......++.+++.++++++||++++....
T Consensus 187 ~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 187 PSDVANIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp CCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred ccccccccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 0 011124679999999999999999988765
No 64
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.77 E-value=4e-18 Score=124.20 Aligned_cols=133 Identities=8% Similarity=0.016 Sum_probs=103.6
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----------------------CCCeeEEecCCcc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----------------------TDNLKYIEGDMFQ 69 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----------------------~~~~~~~~~d~~~ 69 (180)
.++.+|||+|||+|..+..|++. +.+++++|+|+ +++.+++ ..++++.++|+.+
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 46789999999999999999988 66899999976 8887742 1579999999976
Q ss_pred -cC---CCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCc
Q 030291 70 -FI---PPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGK 145 (180)
Q Consensus 70 -~~---~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (180)
+. +.||+|++..++++++++....+++++.++||| ||.+++.......... . ....
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~Lkp---GG~l~l~~~~~~~~~~----------------~-g~~~ 204 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRK---EFQYLVAVLSYDPTKH----------------A-GPPF 204 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEE---EEEEEEEEEECCTTSC----------------C-CSSC
T ss_pred CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCC---CeEEEEEEEecCCccC----------------C-CCCC
Confidence 21 469999999999999988777899999999999 8888766654322100 0 0112
Q ss_pred ccCHHHHHHHHHHcCCeEEEEeec
Q 030291 146 ERTEQEWGSLFVNAGFTHYKIAPI 169 (180)
Q Consensus 146 ~~~~~~~~~~l~~aGf~~~~~~~~ 169 (180)
..+.+++.++++. +|+++.....
T Consensus 205 ~~~~~el~~~l~~-~f~v~~~~~~ 227 (252)
T 2gb4_A 205 YVPSAELKRLFGT-KCSMQCLEEV 227 (252)
T ss_dssp CCCHHHHHHHHTT-TEEEEEEEEE
T ss_pred CCCHHHHHHHhhC-CeEEEEEecc
Confidence 3588999999987 5998776543
No 65
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.77 E-value=8e-19 Score=126.81 Aligned_cols=151 Identities=17% Similarity=0.182 Sum_probs=105.2
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC---CCCeeEEecCCcc-cC--CCccEEEecccccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ---TDNLKYIEGDMFQ-FI--PPSDAFFFKTVFHF 85 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~---~~~~~~~~~d~~~-~~--~~~D~v~~~~~l~~ 85 (180)
..++.+|||||||+|.++..+++... .+++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|++..+++|
T Consensus 41 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 119 (243)
T 3bkw_A 41 EVGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHY 119 (243)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGG
T ss_pred ccCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEeccccc
Confidence 34678999999999999999988732 2899999965 8877764 3479999999965 22 35999999999999
Q ss_pred CChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCch--hh-hhh-------hhccceeeE----e--ecCCcccCH
Q 030291 86 FDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDR--EL-TES-------KLLFDIFMN----F--NVGGKERTE 149 (180)
Q Consensus 86 ~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~--~~-~~~-------~~~~~~~~~----~--~~~~~~~~~ 149 (180)
+++.. .++++++++|+| ||.+++............ .. ... ......... . ......++.
T Consensus 120 ~~~~~--~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 194 (243)
T 3bkw_A 120 VEDVA--RLFRTVHQALSP---GGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTV 194 (243)
T ss_dssp CSCHH--HHHHHHHHHEEE---EEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCH
T ss_pred cchHH--HHHHHHHHhcCc---CcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccH
Confidence 98877 789999999999 888888775421100000 00 000 000000000 0 011123589
Q ss_pred HHHHHHHHHcCCeEEEEeec
Q 030291 150 QEWGSLFVNAGFTHYKIAPI 169 (180)
Q Consensus 150 ~~~~~~l~~aGf~~~~~~~~ 169 (180)
++|.++++++||+++++...
T Consensus 195 ~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 195 GTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp HHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHcCCEeeeeccC
Confidence 99999999999999988754
No 66
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.77 E-value=1.5e-18 Score=126.79 Aligned_cols=97 Identities=12% Similarity=0.163 Sum_probs=83.3
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcc-cC--CCccEEEeccccccCChH
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQ-FI--PPSDAFFFKTVFHFFDDE 89 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~-~~--~~~D~v~~~~~l~~~~~~ 89 (180)
+...+|||||||+|.++..|++. ..+++++|+++ |++.+++..++++.++|+.+ +. .+||+|++..++||++.+
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~--~~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~~ 115 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEF--FERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFDLD 115 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTT--CSEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCTTCCHH
T ss_pred CCCCCEEEEcCCCCHHHHHHHHh--CCEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehhHhhHH
Confidence 45689999999999999999988 45799999976 99999988999999999955 33 369999999999888643
Q ss_pred HHHHHHHHHHHhhccCCCCcEEEEEEeee
Q 030291 90 DCLKLLKKCREAIASNGERGKVLIIDIVI 118 (180)
Q Consensus 90 ~~~~~l~~~~~~L~p~~~~G~~~~~~~~~ 118 (180)
+++++++++||| ||.+++.....
T Consensus 116 ---~~~~e~~rvLkp---gG~l~~~~~~~ 138 (257)
T 4hg2_A 116 ---RFWAELRRVARP---GAVFAAVTYGL 138 (257)
T ss_dssp ---HHHHHHHHHEEE---EEEEEEEEECC
T ss_pred ---HHHHHHHHHcCC---CCEEEEEECCC
Confidence 789999999999 89888877643
No 67
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.77 E-value=1.9e-18 Score=127.46 Aligned_cols=140 Identities=17% Similarity=0.243 Sum_probs=106.4
Q ss_pred CCCeEEEeCCcc---cHHHHHHHHHCCCCeEEEeeCch-hhccCCC----CCCeeEEecCCccc------------C--C
Q 030291 15 GLRSMVDVGGGT---GAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----TDNLKYIEGDMFQF------------I--P 72 (180)
Q Consensus 15 ~~~~iLdiG~G~---G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----~~~~~~~~~d~~~~------------~--~ 72 (180)
+..+|||||||+ |.++..+.+.+|+.+++++|++. |++.+++ ..+++++++|+.+. + .
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 457999999999 99888888888999999999965 8888874 46899999999641 1 3
Q ss_pred CccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHH
Q 030291 73 PSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEW 152 (180)
Q Consensus 73 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (180)
.||+|++..++||+++.....+|++++++|+| ||.+++.+..... . .. ... ..+.+.....+.+.++.+++
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~p---GG~l~i~~~~~~~-~-~~-~~~---~~~~~~~~~~~~~~~s~~ei 227 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAP---GSYLFMTSLVDTG-L-PA-QQK---LARITRENLGEGWARTPEEI 227 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCT---TCEEEEEEEBCSS-C-HH-HHH---HHHHHHHHHSCCCCBCHHHH
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCC---CcEEEEEEecCcc-h-HH-HHH---HHHHHHhcCCCCccCCHHHH
Confidence 69999999999999986566899999999999 9999999876532 1 11 111 11111111123456899999
Q ss_pred HHHHHHcCCeEEE
Q 030291 153 GSLFVNAGFTHYK 165 (180)
Q Consensus 153 ~~~l~~aGf~~~~ 165 (180)
.++| .||++++
T Consensus 228 ~~~l--~G~~l~~ 238 (274)
T 2qe6_A 228 ERQF--GDFELVE 238 (274)
T ss_dssp HHTT--TTCEECT
T ss_pred HHHh--CCCeEcc
Confidence 9999 5998765
No 68
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.76 E-value=2.7e-18 Score=124.12 Aligned_cols=150 Identities=11% Similarity=0.049 Sum_probs=104.1
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCcc-cC-CCccEEEecc-cccc
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQ-FI-PPSDAFFFKT-VFHF 85 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~-~~-~~~D~v~~~~-~l~~ 85 (180)
++.+|||||||+|.++..+++. +.+++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|++.. +++|
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~ 114 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLDSTNY 114 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECTTGGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEEcCccccc
Confidence 6789999999999999999888 56899999966 8888875 2279999999965 22 4699999998 9999
Q ss_pred CCh-HHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCC---chhh-------hhhhh--------ccceeeE-------
Q 030291 86 FDD-EDCLKLLKKCREAIASNGERGKVLIIDIVIDEKED---DREL-------TESKL--------LFDIFMN------- 139 (180)
Q Consensus 86 ~~~-~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~---~~~~-------~~~~~--------~~~~~~~------- 139 (180)
+++ .....++++++++|+| ||.+++.......... .... ...+. .......
T Consensus 115 ~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (246)
T 1y8c_A 115 IIDSDDLKKYFKAVSNHLKE---GGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRDGEFY 191 (246)
T ss_dssp CCSHHHHHHHHHHHHTTEEE---EEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEECSSSE
T ss_pred cCCHHHHHHHHHHHHHhcCC---CcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEecCCcc
Confidence 943 4456899999999999 7877774432110000 0000 00000 0000000
Q ss_pred ----eecCCcccCHHHHHHHHHHcCCeEEEEeec
Q 030291 140 ----FNVGGKERTEQEWGSLFVNAGFTHYKIAPI 169 (180)
Q Consensus 140 ----~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 169 (180)
.....+.++.++|.++|+++||+++++...
T Consensus 192 ~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 225 (246)
T 1y8c_A 192 KRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDC 225 (246)
T ss_dssp EEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEES
T ss_pred cccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcc
Confidence 001135679999999999999999998755
No 69
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.76 E-value=2.9e-18 Score=127.48 Aligned_cols=143 Identities=15% Similarity=0.214 Sum_probs=96.9
Q ss_pred cCCCeEEEeCCcccHHHHH----HHHHCCCCeE--EEeeCch-hhccCCC-------CCCee--EEecCCcc-c------
Q 030291 14 QGLRSMVDVGGGTGAFARI----ISEAFPGIKC--TVLDLPH-AVTDMPQ-------TDNLK--YIEGDMFQ-F------ 70 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~----l~~~~~~~~~--~~~D~~~-~~~~a~~-------~~~~~--~~~~d~~~-~------ 70 (180)
.++.+|||||||+|.++.. +...++..++ +++|+|+ |++.+++ ..+++ +..++..+ .
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 4567999999999986653 3445577754 9999976 8887753 13444 44555532 1
Q ss_pred --CCCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccC
Q 030291 71 --IPPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERT 148 (180)
Q Consensus 71 --~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (180)
..+||+|++..++||++|+. ++|++++++||| ||.+++.......... ..+........ .......++
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~--~~l~~~~r~Lkp---gG~l~i~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~ 200 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIP--ATLKFFHSLLGT---NAKMLIIVVSGSSGWD-KLWKKYGSRFP----QDDLCQYIT 200 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHH--HHHHHHHHTEEE---EEEEEEEEECTTSHHH-HHHHHHGGGSC----CCTTCCCCC
T ss_pred cCCCceeEEEEeeeeeecCCHH--HHHHHHHHHcCC---CcEEEEEEecCCccHH-HHHHHHHHhcc----CCCcccCCC
Confidence 23699999999999999988 779999999999 8999988643211100 00011111010 011235678
Q ss_pred HHHHHHHHHHcCCeEEEE
Q 030291 149 EQEWGSLFVNAGFTHYKI 166 (180)
Q Consensus 149 ~~~~~~~l~~aGf~~~~~ 166 (180)
.++|.++|+++||+++..
T Consensus 201 ~~~~~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 201 SDDLTQMLDNLGLKYECY 218 (292)
T ss_dssp HHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHCCCceEEE
Confidence 999999999999998764
No 70
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.75 E-value=2.9e-18 Score=133.35 Aligned_cols=148 Identities=11% Similarity=0.117 Sum_probs=106.8
Q ss_pred cccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCc----cc----CCCc
Q 030291 4 LLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMF----QF----IPPS 74 (180)
Q Consensus 4 ~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~----~~----~~~~ 74 (180)
.+++.+. .+++.+|||||||+|.++..+++. +.+++++|+++ +++.+++. ++......+. .. ..+|
T Consensus 98 ~l~~~~~--~~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~l~~~~~~f 172 (416)
T 4e2x_A 98 DFLATEL--TGPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK-GIRVRTDFFEKATADDVRRTEGPA 172 (416)
T ss_dssp HHHHTTT--CSSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT-TCCEECSCCSHHHHHHHHHHHCCE
T ss_pred HHHHHhC--CCCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc-CCCcceeeechhhHhhcccCCCCE
Confidence 3445555 567889999999999999999987 56899999976 88888764 3333332221 11 2479
Q ss_pred cEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHH
Q 030291 75 DAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGS 154 (180)
Q Consensus 75 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (180)
|+|++..+++|+++.. .++++++++|+| ||.+++..+..... .......... ..+...++.+++.+
T Consensus 173 D~I~~~~vl~h~~d~~--~~l~~~~r~Lkp---gG~l~i~~~~~~~~------~~~~~~~~~~---~~~~~~~s~~~l~~ 238 (416)
T 4e2x_A 173 NVIYAANTLCHIPYVQ--SVLEGVDALLAP---DGVFVFEDPYLGDI------VAKTSFDQIF---DEHFFLFSATSVQG 238 (416)
T ss_dssp EEEEEESCGGGCTTHH--HHHHHHHHHEEE---EEEEEEEEECHHHH------HHHTCGGGCS---TTCCEECCHHHHHH
T ss_pred EEEEECChHHhcCCHH--HHHHHHHHHcCC---CeEEEEEeCChHHh------hhhcchhhhh---hhhhhcCCHHHHHH
Confidence 9999999999999887 889999999999 88888865543211 0111111111 23345679999999
Q ss_pred HHHHcCCeEEEEeecC
Q 030291 155 LFVNAGFTHYKIAPIF 170 (180)
Q Consensus 155 ~l~~aGf~~~~~~~~~ 170 (180)
+++++||+++++....
T Consensus 239 ll~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 239 MAQRCGFELVDVQRLP 254 (416)
T ss_dssp HHHHTTEEEEEEEEEC
T ss_pred HHHHcCCEEEEEEEcc
Confidence 9999999999887753
No 71
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.75 E-value=6e-18 Score=121.04 Aligned_cols=145 Identities=17% Similarity=0.172 Sum_probs=105.3
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcc---cC--CCccEEEeccccccCC
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQ---FI--PPSDAFFFKTVFHFFD 87 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~---~~--~~~D~v~~~~~l~~~~ 87 (180)
.++.+|||+|||+|.++..+++. +.+++++|+++ +++.+++.. .++.++|+.+ +. ..||+|++..+++|++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~ 107 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN--GTRVSGIEAFPEAAEQAKEKL-DHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLF 107 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT--TCEEEEEESSHHHHHHHHTTS-SEEEESCTTTCCCCSCTTCEEEEEEESCGGGSS
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC-CcEEEcchhhcCCCCCCCccCEEEECChhhhcC
Confidence 46789999999999999999888 47999999966 888777532 3678888754 22 3599999999999999
Q ss_pred hHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhh-hhcccee--e-EeecCCcccCHHHHHHHHHHcCCeE
Q 030291 88 DEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTES-KLLFDIF--M-NFNVGGKERTEQEWGSLFVNAGFTH 163 (180)
Q Consensus 88 ~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~-~~~~~~~~~~~~~~~~~l~~aGf~~ 163 (180)
++. .+++++.++|+| ||.+++..+...... ..... ...+... . ....+.+.++.++|.++++++||++
T Consensus 108 ~~~--~~l~~~~~~L~~---gG~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 179 (230)
T 3cc8_A 108 DPW--AVIEKVKPYIKQ---NGVILASIPNVSHIS---VLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSI 179 (230)
T ss_dssp CHH--HHHHHTGGGEEE---EEEEEEEEECTTSHH---HHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEE
T ss_pred CHH--HHHHHHHHHcCC---CCEEEEEeCCcchHH---HHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeE
Confidence 887 889999999999 888888765432210 00000 0000000 0 0012235679999999999999999
Q ss_pred EEEeec
Q 030291 164 YKIAPI 169 (180)
Q Consensus 164 ~~~~~~ 169 (180)
++....
T Consensus 180 ~~~~~~ 185 (230)
T 3cc8_A 180 SKVDRV 185 (230)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 888764
No 72
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.75 E-value=7.2e-18 Score=120.33 Aligned_cols=137 Identities=17% Similarity=0.165 Sum_probs=101.8
Q ss_pred CCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcc-cC--CCccEEEeccccccCChHHH
Q 030291 16 LRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQ-FI--PPSDAFFFKTVFHFFDDEDC 91 (180)
Q Consensus 16 ~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~-~~--~~~D~v~~~~~l~~~~~~~~ 91 (180)
+.+|||||||+|.++..+++. +++|+++ +++.+++. ++++.++|+.+ +. ..||+|++..+++|+++..
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~- 119 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-GVFVLKGTAENLPLKDESFDFALMVTTICFVDDPE- 119 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHH-
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-CCEEEEcccccCCCCCCCeeEEEEcchHhhccCHH-
Confidence 789999999999999877543 9999966 88887755 78999999855 22 2599999999999998887
Q ss_pred HHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEEEEeec
Q 030291 92 LKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHYKIAPI 169 (180)
Q Consensus 92 ~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 169 (180)
.+++++.++|+| ||.+++.......... ..................++.+++.++++++||+++++...
T Consensus 120 -~~l~~~~~~L~p---gG~l~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 120 -RALKEAYRILKK---GGYLIVGIVDRESFLG-----REYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQT 188 (219)
T ss_dssp -HHHHHHHHHEEE---EEEEEEEEECSSSHHH-----HHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred -HHHHHHHHHcCC---CcEEEEEEeCCccHHH-----HHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecc
Confidence 789999999999 8888888764432111 10000000011112345679999999999999999888755
No 73
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.74 E-value=7.1e-17 Score=112.56 Aligned_cols=126 Identities=16% Similarity=0.157 Sum_probs=103.3
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-CCCeeEEecCCcc-cC--CCccEEEec-cccccC
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-TDNLKYIEGDMFQ-FI--PPSDAFFFK-TVFHFF 86 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-~~~~~~~~~d~~~-~~--~~~D~v~~~-~~l~~~ 86 (180)
++++.+|||+|||+|.++..+++. +.+++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|++. .+++|+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGS
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhc
Confidence 467889999999999999999887 66899999965 8877765 4679999999865 23 369999998 789999
Q ss_pred ChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEEEE
Q 030291 87 DDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHYKI 166 (180)
Q Consensus 87 ~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 166 (180)
+++....+++++.++|+| ||.+++..... ..++.+++.+.++++||++++.
T Consensus 122 ~~~~~~~~l~~~~~~l~~---~G~l~~~~~~~--------------------------~~~~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 122 AEDGREPALANIHRALGA---DGRAVIGFGAG--------------------------RGWVFGDFLEVAERVGLELENA 172 (195)
T ss_dssp CHHHHHHHHHHHHHHEEE---EEEEEEEEETT--------------------------SSCCHHHHHHHHHHHTEEEEEE
T ss_pred ChHHHHHHHHHHHHHhCC---CCEEEEEeCCC--------------------------CCcCHHHHHHHHHHcCCEEeee
Confidence 877777999999999999 88887754211 1257889999999999999988
Q ss_pred eec
Q 030291 167 API 169 (180)
Q Consensus 167 ~~~ 169 (180)
...
T Consensus 173 ~~~ 175 (195)
T 3cgg_A 173 FES 175 (195)
T ss_dssp ESS
T ss_pred ecc
Confidence 654
No 74
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.74 E-value=2.9e-18 Score=124.21 Aligned_cols=149 Identities=18% Similarity=0.209 Sum_probs=105.9
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC---CCCeeEEecCCccc-C-------CCccEEEec
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ---TDNLKYIEGDMFQF-I-------PPSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~---~~~~~~~~~d~~~~-~-------~~~D~v~~~ 80 (180)
++++.+|||||||+|.++..+++..+ +++++|+++ +++.+++ ..++++.++|+.+. . ..||+|++.
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEc
Confidence 46778999999999999999999975 799999966 8887764 45899999999651 1 138999999
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhcc----ceeeEeecCCcccCHHHHHHHH
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLF----DIFMNFNVGGKERTEQEWGSLF 156 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l 156 (180)
.++||+++.....+++++.++|+| ||.+++.+...........+....... ............++.+++.+++
T Consensus 132 ~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (245)
T 3ggd_A 132 TGFHHIPVEKRELLGQSLRILLGK---QGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF 208 (245)
T ss_dssp SSSTTSCGGGHHHHHHHHHHHHTT---TCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC
T ss_pred chhhcCCHHHHHHHHHHHHHHcCC---CCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh
Confidence 999999966666999999999999 999999987543211100000000000 0000000011236889999999
Q ss_pred HHcCCeEEEEee
Q 030291 157 VNAGFTHYKIAP 168 (180)
Q Consensus 157 ~~aGf~~~~~~~ 168 (180)
+||+++....
T Consensus 209 --aGf~~~~~~~ 218 (245)
T 3ggd_A 209 --PDFEILSQGE 218 (245)
T ss_dssp --TTEEEEEEEC
T ss_pred --CCCEEEeccc
Confidence 9999987643
No 75
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.74 E-value=1.9e-17 Score=116.06 Aligned_cols=135 Identities=15% Similarity=0.129 Sum_probs=104.7
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCccc--CCCccEEEecccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQF--IPPSDAFFFKTVF 83 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~--~~~~D~v~~~~~l 83 (180)
..++.+|||+|||+|.++..+++. +.+++++|+++ +++.+++ ..++++.++|+.+. ...||+|++..++
T Consensus 30 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l 107 (199)
T 2xvm_A 30 VVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILSTVVL 107 (199)
T ss_dssp TSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCEEEEEEESCG
T ss_pred ccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCceEEEEcchh
Confidence 456789999999999999999887 66899999966 8887764 24799999998652 2369999999999
Q ss_pred ccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeE
Q 030291 84 HFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTH 163 (180)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 163 (180)
+|+++.....+++++.++|+| ||.+++.+......... .......++.+++.+++++ |++
T Consensus 108 ~~~~~~~~~~~l~~~~~~L~~---gG~l~~~~~~~~~~~~~---------------~~~~~~~~~~~~l~~~~~~--f~~ 167 (199)
T 2xvm_A 108 MFLEAKTIPGLIANMQRCTKP---GGYNLIVAAMDTADYPC---------------TVGFPFAFKEGELRRYYEG--WER 167 (199)
T ss_dssp GGSCGGGHHHHHHHHHHTEEE---EEEEEEEEEBCCSSSCC---------------CSCCSCCBCTTHHHHHTTT--SEE
T ss_pred hhCCHHHHHHHHHHHHHhcCC---CeEEEEEEeeccCCcCC---------------CCCCCCccCHHHHHHHhcC--CeE
Confidence 999966666899999999999 89888877654332110 0111235688999999986 998
Q ss_pred EEEeec
Q 030291 164 YKIAPI 169 (180)
Q Consensus 164 ~~~~~~ 169 (180)
++....
T Consensus 168 ~~~~~~ 173 (199)
T 2xvm_A 168 VKYNED 173 (199)
T ss_dssp EEEECC
T ss_pred EEeccc
Confidence 877543
No 76
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.73 E-value=1.1e-17 Score=122.26 Aligned_cols=147 Identities=14% Similarity=0.127 Sum_probs=104.2
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCcc-cC--CCccEEEecccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQ-FI--PPSDAFFFKTVF 83 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~-~~--~~~D~v~~~~~l 83 (180)
++++.+|||||||+|.++..+++. +.+++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|++..++
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLW 114 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCG
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCch
Confidence 567889999999999999999887 67899999966 8877754 4689999999955 22 359999999999
Q ss_pred ccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhh-hhhhccceeeE-eecCCcccCHHHHHHHHHHcCC
Q 030291 84 HFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELT-ESKLLFDIFMN-FNVGGKERTEQEWGSLFVNAGF 161 (180)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~aGf 161 (180)
||+++.. .+++++.++|+| ||.+++. ...........+. ........... .......++.+++.++++++||
T Consensus 115 ~~~~~~~--~~l~~~~~~L~p---gG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 188 (263)
T 2yqz_A 115 HLVPDWP--KVLAEAIRVLKP---GGALLEG-WDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGL 188 (263)
T ss_dssp GGCTTHH--HHHHHHHHHEEE---EEEEEEE-EEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTC
T ss_pred hhcCCHH--HHHHHHHHHCCC---CcEEEEE-ecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCC
Confidence 9999877 789999999999 8888887 3322111100000 01111110000 0012245678999999999999
Q ss_pred eEEEEe
Q 030291 162 THYKIA 167 (180)
Q Consensus 162 ~~~~~~ 167 (180)
+++...
T Consensus 189 ~~~~~~ 194 (263)
T 2yqz_A 189 KPRTRE 194 (263)
T ss_dssp CCEEEE
T ss_pred CcceEE
Confidence 977653
No 77
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.73 E-value=2.1e-18 Score=126.46 Aligned_cols=140 Identities=11% Similarity=0.099 Sum_probs=98.7
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----C------------------------------
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----T------------------------------ 57 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----~------------------------------ 57 (180)
..++.+|||||||+|.++..++... -.+++++|+|+ |++.+++ .
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~-~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDS-FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGT-EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhh-hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 3467899999999998877655552 13699999976 8886653 0
Q ss_pred -CCee-EEecCCccc-------CCCccEEEeccccccC-Ch-HHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchh
Q 030291 58 -DNLK-YIEGDMFQF-------IPPSDAFFFKTVFHFF-DD-EDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRE 126 (180)
Q Consensus 58 -~~~~-~~~~d~~~~-------~~~~D~v~~~~~l~~~-~~-~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~ 126 (180)
.++. +.++|+.+. .++||+|+++.++||+ ++ ++...++++++++||| ||.+++.+...... .
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKP---GG~li~~~~~~~~~--~-- 204 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKP---GGHLVTTVTLRLPS--Y-- 204 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE---EEEEEEEEESSCCE--E--
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCC---CcEEEEEEeecCcc--c--
Confidence 1233 788888652 2469999999999986 32 4455889999999999 89999886532110 0
Q ss_pred hhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEEEEeec
Q 030291 127 LTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHYKIAPI 169 (180)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 169 (180)
.... . ......++.+++.+.|+++||+++++...
T Consensus 205 ------~~g~--~-~~~~~~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 205 ------MVGK--R-EFSCVALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp ------EETT--E-EEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred ------eeCC--e-EeeccccCHHHHHHHHHHCCCEEEEEeec
Confidence 0000 0 01123468999999999999999888764
No 78
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.73 E-value=9e-17 Score=116.01 Aligned_cols=97 Identities=18% Similarity=0.346 Sum_probs=78.3
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCccc-C-CCccEEEecc-cc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQF-I-PPSDAFFFKT-VF 83 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~~-~-~~~D~v~~~~-~l 83 (180)
+++..+|||+|||+|.++..+++. .+++++|+++ +++.+++ ..++++.++|+.+. . ..||+|++.. ++
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~~ 107 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITILCDSL 107 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEECTTGG
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEEeCCch
Confidence 346689999999999999988776 6899999965 8888764 35789999998652 2 3699999986 99
Q ss_pred ccCC-hHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 84 HFFD-DEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 84 ~~~~-~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
+|+. ......+++++.++|+| ||.+++..
T Consensus 108 ~~~~~~~~~~~~l~~~~~~L~p---gG~l~~~~ 137 (243)
T 3d2l_A 108 NYLQTEADVKQTFDSAARLLTD---GGKLLFDV 137 (243)
T ss_dssp GGCCSHHHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHhcCC---CeEEEEEc
Confidence 9984 34556889999999999 78777643
No 79
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.72 E-value=4.7e-17 Score=115.00 Aligned_cols=148 Identities=11% Similarity=0.097 Sum_probs=104.5
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCcc-cC--CCccEEEecccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQ-FI--PPSDAFFFKTVF 83 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~-~~--~~~D~v~~~~~l 83 (180)
.+++.+|||+|||+|..+..++.. ++.+++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|++..++
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCG
T ss_pred cCCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChH
Confidence 356789999999999985544444 367999999966 8887764 3678999999965 22 359999999999
Q ss_pred ccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeE----eecCCcccCHHHHHHHHHHc
Q 030291 84 HFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMN----FNVGGKERTEQEWGSLFVNA 159 (180)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~a 159 (180)
+|++......+++++.++|+| ||.+++.+.......... ........+.. .....+.++.+++.+++++.
T Consensus 100 ~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 173 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVLKP---GGLACINFLTTKDERYNK---GEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDM 173 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHEEE---EEEEEEEEEETTSTTTTC---SEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTS
T ss_pred HhCCHHHHHHHHHHHHHHcCC---CcEEEEEEecccchhccc---hhhhccccceeccCCCceeEEecCHHHHHHHHhhc
Confidence 999766667999999999999 899988887654332110 00000000000 00112567899999999999
Q ss_pred CCeEEEEe
Q 030291 160 GFTHYKIA 167 (180)
Q Consensus 160 Gf~~~~~~ 167 (180)
||...+..
T Consensus 174 g~~~~~~~ 181 (209)
T 2p8j_A 174 KVLFKEDR 181 (209)
T ss_dssp EEEEEEEE
T ss_pred Cceeeeee
Confidence 99776543
No 80
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.71 E-value=2.2e-17 Score=123.02 Aligned_cols=98 Identities=17% Similarity=0.195 Sum_probs=84.4
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHC-CCCeEEEeeCch-hhccCCC--------CCCeeEEecCCcc-c--C------CCc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAF-PGIKCTVLDLPH-AVTDMPQ--------TDNLKYIEGDMFQ-F--I------PPS 74 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~~~~D~~~-~~~~a~~--------~~~~~~~~~d~~~-~--~------~~~ 74 (180)
+++.+|||||||+|.++..+++.+ +..+++++|+++ +++.+++ ..++++.++|+.+ + . ..|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 578899999999999999999886 889999999966 8888864 4689999999965 2 2 469
Q ss_pred cEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 75 DAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 75 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
|+|++..++||+ +.. .+++++.++|+| ||.+++....
T Consensus 115 D~V~~~~~l~~~-~~~--~~l~~~~~~Lkp---gG~l~i~~~~ 151 (299)
T 3g5t_A 115 DMITAVECAHWF-DFE--KFQRSAYANLRK---DGTIAIWGYA 151 (299)
T ss_dssp EEEEEESCGGGS-CHH--HHHHHHHHHEEE---EEEEEEEEEE
T ss_pred eEEeHhhHHHHh-CHH--HHHHHHHHhcCC---CcEEEEEecC
Confidence 999999999999 666 889999999999 8998885544
No 81
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.71 E-value=6.5e-17 Score=120.09 Aligned_cols=153 Identities=13% Similarity=0.042 Sum_probs=106.0
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcc-cC---CCccEEEec
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQ-FI---PPSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~-~~---~~~D~v~~~ 80 (180)
++++.+|||||||+|.++..+++.. ..+++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|++.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ 140 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEEC
Confidence 3678899999999999999888773 55899999966 8887764 1468999999965 22 259999999
Q ss_pred ccccc--CChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCc------------hhhh---hhhh-ccceeeEe--
Q 030291 81 TVFHF--FDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDD------------RELT---ESKL-LFDIFMNF-- 140 (180)
Q Consensus 81 ~~l~~--~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~------------~~~~---~~~~-~~~~~~~~-- 140 (180)
.++|| ........+++++.++|+| ||.+++..+........ ..+. .... ....+...
T Consensus 141 ~~l~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~ 217 (298)
T 1ri5_A 141 FSFHYAFSTSESLDIAQRNIARHLRP---GGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLL 217 (298)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEE---EEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEET
T ss_pred chhhhhcCCHHHHHHHHHHHHHhcCC---CCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEc
Confidence 99988 4455556899999999999 88888877543210000 0000 0000 00000000
Q ss_pred ----ecCCcccCHHHHHHHHHHcCCeEEEEeec
Q 030291 141 ----NVGGKERTEQEWGSLFVNAGFTHYKIAPI 169 (180)
Q Consensus 141 ----~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 169 (180)
....+.++.+++.++++++||++++....
T Consensus 218 ~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~ 250 (298)
T 1ri5_A 218 DSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGF 250 (298)
T ss_dssp TSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEH
T ss_pred hhhcCCcccccCHHHHHHHHHHcCCEEEEecCH
Confidence 01124578999999999999999988755
No 82
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.71 E-value=2.1e-17 Score=122.71 Aligned_cols=100 Identities=20% Similarity=0.207 Sum_probs=82.4
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----------CCCeeEEecCCcc-c---C--CCcc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----------TDNLKYIEGDMFQ-F---I--PPSD 75 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----------~~~~~~~~~d~~~-~---~--~~~D 75 (180)
..++.+|||||||+|.++..+++. +.+++++|+++ +++.+++ ..++.+..+|+.+ + . ..||
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD 132 (293)
T 3thr_A 55 QHGCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFD 132 (293)
T ss_dssp HTTCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeE
Confidence 356789999999999999999988 55899999976 8888853 2567888888855 2 2 3699
Q ss_pred EEEec-cccccCCh-----HHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 76 AFFFK-TVFHFFDD-----EDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 76 ~v~~~-~~l~~~~~-----~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
+|++. .+++|+++ .....+++++.++|+| ||.+++....
T Consensus 133 ~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~ 177 (293)
T 3thr_A 133 AVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRP---GGLLVIDHRN 177 (293)
T ss_dssp EEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEE---EEEEEEEEEC
T ss_pred EEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCC---CeEEEEEeCC
Confidence 99998 89999998 4455899999999999 8888887654
No 83
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.70 E-value=9.1e-17 Score=113.39 Aligned_cols=131 Identities=12% Similarity=0.103 Sum_probs=105.3
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCcccC-CCccEEEeccccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQFI-PPSDAFFFKTVFH 84 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~~-~~~D~v~~~~~l~ 84 (180)
++++.+|||+|||+|.++..+++. +..+++++|+++ +++.+++ ..++++.++|+.+.. ..||+|+++..++
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAE 136 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHH
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHH
Confidence 456789999999999999998764 456899999966 8887764 234999999997643 4699999988776
Q ss_pred cCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEE
Q 030291 85 FFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHY 164 (180)
Q Consensus 85 ~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 164 (180)
++ ..+++++.++|+| ||.+++.+.... +.+++.+.++++||+++
T Consensus 137 ~~-----~~~l~~~~~~L~~---gG~l~~~~~~~~----------------------------~~~~~~~~~~~~Gf~~~ 180 (205)
T 3grz_A 137 IL-----LDLIPQLDSHLNE---DGQVIFSGIDYL----------------------------QLPKIEQALAENSFQID 180 (205)
T ss_dssp HH-----HHHGGGSGGGEEE---EEEEEEEEEEGG----------------------------GHHHHHHHHHHTTEEEE
T ss_pred HH-----HHHHHHHHHhcCC---CCEEEEEecCcc----------------------------cHHHHHHHHHHcCCceE
Confidence 53 4789999999999 888888653221 45788899999999999
Q ss_pred EEeecCCceeEEEEeC
Q 030291 165 KIAPIFGIKSLIEVYP 180 (180)
Q Consensus 165 ~~~~~~~~~~~~~~~~ 180 (180)
++....++.+++..+|
T Consensus 181 ~~~~~~~w~~~~~~~~ 196 (205)
T 3grz_A 181 LKMRAGRWIGLAISRK 196 (205)
T ss_dssp EEEEETTEEEEEEEEC
T ss_pred EeeccCCEEEEEEecc
Confidence 9999888888887654
No 84
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.70 E-value=2.4e-17 Score=120.48 Aligned_cols=140 Identities=13% Similarity=0.155 Sum_probs=101.9
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC---CC-------------------------------
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ---TD------------------------------- 58 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~---~~------------------------------- 58 (180)
.++.+|||||||+|.++..+++..+ .+++++|+++ +++.+++ ..
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 4568999999999999988887754 4899999976 8887754 11
Q ss_pred -Ce-eEEecCCccc----C---CCccEEEeccccccCChH--HHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhh
Q 030291 59 -NL-KYIEGDMFQF----I---PPSDAFFFKTVFHFFDDE--DCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDREL 127 (180)
Q Consensus 59 -~~-~~~~~d~~~~----~---~~~D~v~~~~~l~~~~~~--~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~ 127 (180)
++ ++.++|+.+. . +.||+|++..+++++... ....+++++.++|+| ||.+++.+..... .
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lkp---gG~li~~~~~~~~--~---- 204 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKP---GGFLVMVDALKSS--Y---- 204 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE---EEEEEEEEESSCC--E----
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCC---CcEEEEEecCCCc--e----
Confidence 17 8999998652 1 359999999999954322 444889999999999 8888888743221 0
Q ss_pred hhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEEEEeecC
Q 030291 128 TESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHYKIAPIF 170 (180)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 170 (180)
...... ......++.+++.++++++||+++++....
T Consensus 205 ------~~~~~~-~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 205 ------YMIGEQ-KFSSLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp ------EEETTE-EEECCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred ------EEcCCc-cccccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 000000 011245688999999999999999887654
No 85
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.70 E-value=2.3e-16 Score=114.58 Aligned_cols=97 Identities=25% Similarity=0.390 Sum_probs=78.7
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCcc-cC-CCccEEEec-ccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQ-FI-PPSDAFFFK-TVF 83 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~-~~-~~~D~v~~~-~~l 83 (180)
.+++.+|||+|||+|.++..+++. +.+++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|++. ..+
T Consensus 39 ~~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 116 (252)
T 1wzn_A 39 KREVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVTMFFSTI 116 (252)
T ss_dssp SSCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEEEEEECSSGG
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCccEEEEcCCch
Confidence 356789999999999999999887 67899999966 8888764 3478999999965 22 369999986 456
Q ss_pred ccCChHHHHHHHHHHHHhhccCCCCcEEEEE
Q 030291 84 HFFDDEDCLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
++++......+++++.++|+| ||.+++.
T Consensus 117 ~~~~~~~~~~~l~~~~~~L~p---gG~li~~ 144 (252)
T 1wzn_A 117 MYFDEEDLRKLFSKVAEALKP---GGVFITD 144 (252)
T ss_dssp GGSCHHHHHHHHHHHHHHEEE---EEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHHcCC---CeEEEEe
Confidence 677766677999999999999 7777664
No 86
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.70 E-value=3e-16 Score=111.48 Aligned_cols=121 Identities=14% Similarity=0.120 Sum_probs=95.4
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCCCCCeeEEecCCcc-cC--CCccEEEeccccccCChHH
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYIEGDMFQ-FI--PPSDAFFFKTVFHFFDDED 90 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~d~~~-~~--~~~D~v~~~~~l~~~~~~~ 90 (180)
.++.+|||||||+|.++..+ ..+++++|+++. ++++.++|+.+ +. ..||+|++..++|+ .+..
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l-----~~~v~~~D~s~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~~ 131 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI-----RNPVHCFDLASL--------DPRVTVCDMAQVPLEDESVDVAVFCLSLMG-TNIR 131 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC-----CSCEEEEESSCS--------STTEEESCTTSCSCCTTCEEEEEEESCCCS-SCHH
T ss_pred CCCCeEEEECCcCCHHHHHh-----hccEEEEeCCCC--------CceEEEeccccCCCCCCCEeEEEEehhccc-cCHH
Confidence 46789999999999998877 257999999653 56778888855 22 35999999999974 5555
Q ss_pred HHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEEEEeecC
Q 030291 91 CLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHYKIAPIF 170 (180)
Q Consensus 91 ~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 170 (180)
.+++++.++|+| ||.+++.+... ...+.+++.++++++||++++.....
T Consensus 132 --~~l~~~~~~L~~---gG~l~i~~~~~--------------------------~~~~~~~~~~~l~~~Gf~~~~~~~~~ 180 (215)
T 2zfu_A 132 --DFLEEANRVLKP---GGLLKVAEVSS--------------------------RFEDVRTFLRAVTKLGFKIVSKDLTN 180 (215)
T ss_dssp --HHHHHHHHHEEE---EEEEEEEECGG--------------------------GCSCHHHHHHHHHHTTEEEEEEECCS
T ss_pred --HHHHHHHHhCCC---CeEEEEEEcCC--------------------------CCCCHHHHHHHHHHCCCEEEEEecCC
Confidence 889999999999 89988876421 11278999999999999999877766
Q ss_pred CceeEEEEe
Q 030291 171 GIKSLIEVY 179 (180)
Q Consensus 171 ~~~~~~~~~ 179 (180)
+...++.++
T Consensus 181 ~~~~~~~~~ 189 (215)
T 2zfu_A 181 SHFFLFDFQ 189 (215)
T ss_dssp TTCEEEEEE
T ss_pred CeEEEEEEE
Confidence 666666654
No 87
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.69 E-value=1.5e-16 Score=111.86 Aligned_cols=134 Identities=9% Similarity=0.037 Sum_probs=99.5
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCcc-cC--CCccEEEeccccc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQ-FI--PPSDAFFFKTVFH 84 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~-~~--~~~D~v~~~~~l~ 84 (180)
+++ +|||||||+|.++..+++. +.+++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|++.. .
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~ 103 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIF--C 103 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEEC--C
T ss_pred CCC-CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEh--h
Confidence 445 9999999999999998887 66899999966 8888765 2489999999865 22 3699999853 4
Q ss_pred cCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEE
Q 030291 85 FFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHY 164 (180)
Q Consensus 85 ~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 164 (180)
|++......+++++.++|+| ||.+++.......... .. .........++.+++.++++ ||+++
T Consensus 104 ~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~---------~~---~~~~~~~~~~~~~~l~~~l~--Gf~v~ 166 (202)
T 2kw5_A 104 HLPSSLRQQLYPKVYQGLKP---GGVFILEGFAPEQLQY---------NT---GGPKDLDLLPKLETLQSELP--SLNWL 166 (202)
T ss_dssp CCCHHHHHHHHHHHHTTCCS---SEEEEEEEECTTTGGG---------TS---CCSSSGGGCCCHHHHHHHCS--SSCEE
T ss_pred cCCHHHHHHHHHHHHHhcCC---CcEEEEEEeccccccC---------CC---CCCCcceeecCHHHHHHHhc--CceEE
Confidence 55656666899999999999 8998888765432210 00 00011235679999999999 99998
Q ss_pred EEeec
Q 030291 165 KIAPI 169 (180)
Q Consensus 165 ~~~~~ 169 (180)
++...
T Consensus 167 ~~~~~ 171 (202)
T 2kw5_A 167 IANNL 171 (202)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77543
No 88
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.69 E-value=1.2e-16 Score=118.22 Aligned_cols=133 Identities=17% Similarity=0.154 Sum_probs=102.5
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCccc--CCCccEEEeccccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQF--IPPSDAFFFKTVFH 84 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~~--~~~~D~v~~~~~l~ 84 (180)
..++.+|||+|||+|.++..+++. +.+++++|+++ +++.+++ ..++++.++|+.+. ...||+|+++.+++
T Consensus 118 ~~~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~i~~~~~~~ 195 (286)
T 3m70_A 118 IISPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDFIVSTVVFM 195 (286)
T ss_dssp HSCSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEEEEEECSSGG
T ss_pred ccCCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCccEEEEccchh
Confidence 346889999999999999999988 66899999966 8887764 23899999999652 23699999999999
Q ss_pred cCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEE
Q 030291 85 FFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHY 164 (180)
Q Consensus 85 ~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 164 (180)
|++++....+++++.++|+| ||.+++........... .......++.+++.+.++. |+++
T Consensus 196 ~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~---------------~~~~~~~~~~~~l~~~~~~--~~~~ 255 (286)
T 3m70_A 196 FLNRERVPSIIKNMKEHTNV---GGYNLIVAAMSTDDVPC---------------PLPFSFTFAENELKEYYKD--WEFL 255 (286)
T ss_dssp GSCGGGHHHHHHHHHHTEEE---EEEEEEEEEBCCSSSCC---------------SSCCSCCBCTTHHHHHTTT--SEEE
T ss_pred hCCHHHHHHHHHHHHHhcCC---CcEEEEEEecCCCCCCC---------------CCCccccCCHHHHHHHhcC--CEEE
Confidence 99988888999999999999 88877766543322110 0111234677888888855 8887
Q ss_pred EEe
Q 030291 165 KIA 167 (180)
Q Consensus 165 ~~~ 167 (180)
...
T Consensus 256 ~~~ 258 (286)
T 3m70_A 256 EYN 258 (286)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 89
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.69 E-value=2e-17 Score=122.78 Aligned_cols=139 Identities=15% Similarity=0.210 Sum_probs=95.1
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC--CC---------------------------------
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ--TD--------------------------------- 58 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~--~~--------------------------------- 58 (180)
++.+|||||||+|..+. ++...+..+++++|+++ |++.+++ ..
T Consensus 71 ~~~~vLDiGcG~G~~~~-l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQL-LSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGG-TTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHH-HhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 56899999999999543 33333366899999976 8876643 00
Q ss_pred -CeeEEecCCcccC-------C--CccEEEeccccccCChH--HHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchh
Q 030291 59 -NLKYIEGDMFQFI-------P--PSDAFFFKTVFHFFDDE--DCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRE 126 (180)
Q Consensus 59 -~~~~~~~d~~~~~-------~--~~D~v~~~~~l~~~~~~--~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~ 126 (180)
.+++..+|+.+.. + +||+|+++.+++|+.+. ....+|++++++||| ||.+++.+...... .
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~Lkp---GG~l~~~~~~~~~~-~--- 222 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRP---GGHLLLIGALEESW-Y--- 222 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE---EEEEEEEEEESCCE-E---
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCC---CCEEEEEEecCcce-E---
Confidence 1346666875411 1 39999999999995432 344889999999999 89988876432110 0
Q ss_pred hhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEEEEeecC
Q 030291 127 LTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHYKIAPIF 170 (180)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 170 (180)
... .. ......++.++|.++|+++||+++++....
T Consensus 223 ------~~~--~~-~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 223 ------LAG--EA-RLTVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp ------EET--TE-EEECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ------EcC--Ce-eeeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 000 00 011245799999999999999998876543
No 90
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.68 E-value=7.1e-16 Score=105.92 Aligned_cols=126 Identities=13% Similarity=0.179 Sum_probs=97.9
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcccCC--CccEEEeccccccCChH-
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQFIP--PSDAFFFKTVFHFFDDE- 89 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~~~--~~D~v~~~~~l~~~~~~- 89 (180)
.++.+|||+|||+|.++..+++.. +++++|+++ +++. ..++++.++|+.++.+ .||+|+++..+++.++.
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~---~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES---HRGGNLVRADLLCSINQESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT---CSSSCEEECSTTTTBCGGGCSEEEECCCCBTTCCCT
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc---ccCCeEEECChhhhcccCCCCEEEECCCCccCCccc
Confidence 456799999999999999998885 899999976 7776 5678999999976443 69999999888865544
Q ss_pred ------HHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeE
Q 030291 90 ------DCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTH 163 (180)
Q Consensus 90 ------~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 163 (180)
....+++++.+.+ | ||.+++.... ..+.+++.++++++||+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~l-p---gG~l~~~~~~----------------------------~~~~~~l~~~l~~~gf~~ 143 (170)
T 3q87_B 96 IIGGGYLGREVIDRFVDAV-T---VGMLYLLVIE----------------------------ANRPKEVLARLEERGYGT 143 (170)
T ss_dssp TTBCCGGGCHHHHHHHHHC-C---SSEEEEEEEG----------------------------GGCHHHHHHHHHHTTCEE
T ss_pred cccCCcchHHHHHHHHhhC-C---CCEEEEEEec----------------------------CCCHHHHHHHHHHCCCcE
Confidence 2236789999999 8 8999886631 124578899999999998
Q ss_pred EEEeec-CCceeEEE
Q 030291 164 YKIAPI-FGIKSLIE 177 (180)
Q Consensus 164 ~~~~~~-~~~~~~~~ 177 (180)
+.+... .++..++.
T Consensus 144 ~~~~~~~~~~e~~~~ 158 (170)
T 3q87_B 144 RILKVRKILGETVYI 158 (170)
T ss_dssp EEEEEEECSSSEEEE
T ss_pred EEEEeeccCCceEEE
Confidence 877655 34444443
No 91
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.68 E-value=1.4e-16 Score=116.33 Aligned_cols=141 Identities=20% Similarity=0.265 Sum_probs=100.5
Q ss_pred CCCeEEEeCCcc--cHHHHHH-HHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCccc---------CCCcc
Q 030291 15 GLRSMVDVGGGT--GAFARII-SEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQF---------IPPSD 75 (180)
Q Consensus 15 ~~~~iLdiG~G~--G~~~~~l-~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~---------~~~~D 75 (180)
+..+|||||||+ +.++..+ ....|+++++++|.+. |+..+++ ..+++++++|+.+. ...||
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 457899999997 3344444 4557999999999966 9999975 23699999999663 12355
Q ss_pred -----EEEeccccccCChHH-HHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCH
Q 030291 76 -----AFFFKTVFHFFDDED-CLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTE 149 (180)
Q Consensus 76 -----~v~~~~~l~~~~~~~-~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (180)
.|+++.+|||+++.+ ...+++++.++|+| ||.+++++......... .... .+.+.....+..+++.
T Consensus 158 ~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~P---GG~Lvls~~~~d~~p~~--~~~~---~~~~~~~g~p~~~rs~ 229 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPS---GSYLAMSIGTAEFAPQE--VGRV---AREYAARNMPMRLRTH 229 (277)
T ss_dssp TTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCT---TCEEEEEEECCTTSHHH--HHHH---HHHHHHTTCCCCCCCH
T ss_pred cCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCC---CcEEEEEeccCCCCHHH--HHHH---HHHHHhcCCCCccCCH
Confidence 688999999999865 35789999999999 99999988765432111 1111 1111111123467899
Q ss_pred HHHHHHHHHcCCeEEE
Q 030291 150 QEWGSLFVNAGFTHYK 165 (180)
Q Consensus 150 ~~~~~~l~~aGf~~~~ 165 (180)
+++..+|. ||++++
T Consensus 230 ~ei~~~f~--Glelve 243 (277)
T 3giw_A 230 AEAEEFFE--GLELVE 243 (277)
T ss_dssp HHHHHTTT--TSEECT
T ss_pred HHHHHHhC--CCcccC
Confidence 99999994 999754
No 92
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.68 E-value=7.5e-17 Score=114.22 Aligned_cols=131 Identities=11% Similarity=0.093 Sum_probs=95.9
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCC-eEEEeeCch-hhccCCC-CCCeeEEecCCcc-cC--CCccEEEeccccccCC
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGI-KCTVLDLPH-AVTDMPQ-TDNLKYIEGDMFQ-FI--PPSDAFFFKTVFHFFD 87 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~-~~~~~D~~~-~~~~a~~-~~~~~~~~~d~~~-~~--~~~D~v~~~~~l~~~~ 87 (180)
.++.+|||||||+|.++..+ +. +++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|++..+++|++
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 109 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVE 109 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCS
T ss_pred CCCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcC
Confidence 37789999999999998877 44 899999966 8887775 3688999999855 22 2599999999999999
Q ss_pred hHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcC
Q 030291 88 DEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAG 160 (180)
Q Consensus 88 ~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 160 (180)
+.. ++++++.++|+| ||.+++..+......... ...... .. .....+.+.++.+++.++++ |
T Consensus 110 ~~~--~~l~~~~~~L~p---gG~l~i~~~~~~~~~~~~-~~~~~~-~~--~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 110 DVE--RVLLEARRVLRP---GGALVVGVLEALSPWAAL-YRRLGE-KG--VLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp CHH--HHHHHHHHHEEE---EEEEEEEEECTTSHHHHH-HHHHHH-TT--CTTGGGCCCCCHHHHHHHHC--S
T ss_pred CHH--HHHHHHHHHcCC---CCEEEEEecCCcCcHHHH-HHHHhh-cc--CccccccccCCHHHHHHHhc--C
Confidence 877 789999999999 899988876543221110 000000 00 00012346689999999998 7
No 93
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.68 E-value=1.7e-16 Score=113.00 Aligned_cols=142 Identities=12% Similarity=0.091 Sum_probs=93.8
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccC----C------CCCCeeEEecCCcc-cCC-CccEEEe
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDM----P------QTDNLKYIEGDMFQ-FIP-PSDAFFF 79 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a----~------~~~~~~~~~~d~~~-~~~-~~D~v~~ 79 (180)
..++.+|||||||+|.++..+++.+|+.+++++|+++ |++.+ + ...++++.++|+.+ +.+ ..|.+++
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~d~v~~ 104 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGVGELHV 104 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCEEEEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCCCEEEE
Confidence 5678899999999999999999999999999999966 77642 2 13589999999965 222 1265553
Q ss_pred ---cccc--ccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHH
Q 030291 80 ---KTVF--HFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGS 154 (180)
Q Consensus 80 ---~~~l--~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (180)
...+ ||++++. .+++++.++||| ||.+++........... .. .... ......+..+++.+
T Consensus 105 ~~~~~~~~~~~~~~~~--~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~---~~---~~~~----~~~~~~~~~~~l~~ 169 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSSP--EMLRGMAAVCRP---GASFLVALNLHAWRPSV---PE---VGEH----PEPTPDSADEWLAP 169 (218)
T ss_dssp ESCCHHHHHHHHTSSS--HHHHHHHHTEEE---EEEEEEEEEGGGBTTBC---GG---GTTC----CCCCHHHHHHHHHH
T ss_pred EccchhhhhhhhccHH--HHHHHHHHHcCC---CcEEEEEeccccccccc---cc---cccC----CccchHHHHHHHHH
Confidence 2233 2666666 789999999999 88887743211111000 00 0000 00011123456888
Q ss_pred HHHHcCCeEEEEeec
Q 030291 155 LFVNAGFTHYKIAPI 169 (180)
Q Consensus 155 ~l~~aGf~~~~~~~~ 169 (180)
.++++||++.++...
T Consensus 170 ~l~~aGf~i~~~~~~ 184 (218)
T 3mq2_A 170 RYAEAGWKLADCRYL 184 (218)
T ss_dssp HHHHTTEEEEEEEEE
T ss_pred HHHHcCCCceeeecc
Confidence 999999999887644
No 94
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.67 E-value=1.3e-15 Score=109.38 Aligned_cols=145 Identities=12% Similarity=0.125 Sum_probs=100.5
Q ss_pred cccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCC----CCCCeeEEecCCccc---C---CCc
Q 030291 6 VKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMP----QTDNLKYIEGDMFQF---I---PPS 74 (180)
Q Consensus 6 ~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~----~~~~~~~~~~d~~~~---~---~~~ 74 (180)
++.+. +.++.+|||+|||+|.++..+++..+..+++++|+++ +++.++ ...++.+..+|+.++ . ..|
T Consensus 67 l~~~~--~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 144 (230)
T 1fbn_A 67 LKVMP--IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKV 144 (230)
T ss_dssp CCCCC--CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCE
T ss_pred ccccC--CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccE
Confidence 44444 6678899999999999999999997667999999965 775543 357899999998641 1 369
Q ss_pred cEEEeccccccCChH-HHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHH
Q 030291 75 DAFFFKTVFHFFDDE-DCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWG 153 (180)
Q Consensus 75 D~v~~~~~l~~~~~~-~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (180)
|+|+ ++++++ ....+++++.++|+| ||.+++. .......... .......+++.
T Consensus 145 D~v~-----~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~-~~~~~~~~~~-----------------~~~~~~~~~l~ 198 (230)
T 1fbn_A 145 DVIY-----EDVAQPNQAEILIKNAKWFLKK---GGYGMIA-IKARSIDVTK-----------------DPKEIFKEQKE 198 (230)
T ss_dssp EEEE-----ECCCSTTHHHHHHHHHHHHEEE---EEEEEEE-EEGGGTCSSS-----------------CHHHHHHHHHH
T ss_pred EEEE-----EecCChhHHHHHHHHHHHhCCC---CcEEEEE-EecCCCCCCC-----------------CHHHhhHHHHH
Confidence 9998 344544 223679999999999 8888886 2211110000 00111236777
Q ss_pred HHHHHcCCeEEEEeecCCc---eeEEEEe
Q 030291 154 SLFVNAGFTHYKIAPIFGI---KSLIEVY 179 (180)
Q Consensus 154 ~~l~~aGf~~~~~~~~~~~---~~~~~~~ 179 (180)
.++++||+.++......+ +.++.++
T Consensus 199 -~l~~~Gf~~~~~~~~~~~~~~~~~v~~~ 226 (230)
T 1fbn_A 199 -ILEAGGFKIVDEVDIEPFEKDHVMFVGI 226 (230)
T ss_dssp -HHHHHTEEEEEEEECTTTSTTEEEEEEE
T ss_pred -HHHHCCCEEEEEEccCCCccceEEEEEE
Confidence 899999999988877554 5555443
No 95
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.67 E-value=6.8e-16 Score=115.21 Aligned_cols=151 Identities=15% Similarity=0.125 Sum_probs=98.8
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CC-------CeeEEecCCcc-----------c
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TD-------NLKYIEGDMFQ-----------F 70 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~-------~~~~~~~d~~~-----------~ 70 (180)
++.+|||||||+|..+..++... ..+++|+|+|+ |++.|++ .. ++++.+.|+.. +
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 46899999999998766666543 56899999977 9998875 11 25677777721 1
Q ss_pred CCCccEEEeccccccC-ChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchh----------h-hhhhhccc---
Q 030291 71 IPPSDAFFFKTVFHFF-DDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRE----------L-TESKLLFD--- 135 (180)
Q Consensus 71 ~~~~D~v~~~~~l~~~-~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~----------~-~~~~~~~~--- 135 (180)
.+.||+|+|..++||+ .+.+...++++++++||| ||.+++..+.......... . .+......
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~Lkp---GG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 203 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTAS---GGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIA 203 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEE---EEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCC---CCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeecccc
Confidence 2369999999999986 333446899999999999 8888887664221110000 0 00000000
Q ss_pred --ee-eEeec------CCcccCHHHHHHHHHHcCCeEEEEeec
Q 030291 136 --IF-MNFNV------GGKERTEQEWGSLFVNAGFTHYKIAPI 169 (180)
Q Consensus 136 --~~-~~~~~------~~~~~~~~~~~~~l~~aGf~~~~~~~~ 169 (180)
.. ..... .....+.+++.++++++||++++...+
T Consensus 204 ~~~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f 246 (302)
T 2vdw_A 204 DDRIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDF 246 (302)
T ss_dssp TTEEEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEH
T ss_pred ccccceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecCh
Confidence 00 00000 013467899999999999999988654
No 96
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.67 E-value=1.3e-15 Score=109.09 Aligned_cols=137 Identities=11% Similarity=0.070 Sum_probs=97.8
Q ss_pred ccccccccCCCeEEEeCCcccHHHHHHHHH-CCCCeEEEeeCch-hhccCC----CCCCeeEEecCCccc------CCCc
Q 030291 7 KDCRPIFQGLRSMVDVGGGTGAFARIISEA-FPGIKCTVLDLPH-AVTDMP----QTDNLKYIEGDMFQF------IPPS 74 (180)
Q Consensus 7 ~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~-~~~~~~~~~D~~~-~~~~a~----~~~~~~~~~~d~~~~------~~~~ 74 (180)
+.++ ++++.+|||+|||+|.++..+++. .|.-+++++|+++ |++.++ +..|+..+..|...+ ...+
T Consensus 71 ~~l~--ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~v 148 (233)
T 4df3_A 71 IELP--VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGV 148 (233)
T ss_dssp SCCC--CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCE
T ss_pred hhcC--CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceE
Confidence 4455 799999999999999999999987 6888999999965 776664 367899998888542 1258
Q ss_pred cEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHH
Q 030291 75 DAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGS 154 (180)
Q Consensus 75 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (180)
|+|++. +.+..+.. .++.++.++||| ||.++++........ . .. .....++..+
T Consensus 149 DvVf~d--~~~~~~~~--~~l~~~~r~LKp---GG~lvI~ik~r~~d~--------~-~p----------~~~~~~~ev~ 202 (233)
T 4df3_A 149 DGLYAD--VAQPEQAA--IVVRNARFFLRD---GGYMLMAIKARSIDV--------T-TE----------PSEVYKREIK 202 (233)
T ss_dssp EEEEEC--CCCTTHHH--HHHHHHHHHEEE---EEEEEEEEECCHHHH--------H-TC----------CCHHHHHHHH
T ss_pred EEEEEe--ccCChhHH--HHHHHHHHhccC---CCEEEEEEecccCCC--------C-CC----------hHHHHHHHHH
Confidence 988864 33444554 779999999999 999888753221100 0 00 0001133456
Q ss_pred HHHHcCCeEEEEeecCC
Q 030291 155 LFVNAGFTHYKIAPIFG 171 (180)
Q Consensus 155 ~l~~aGf~~~~~~~~~~ 171 (180)
.|+++||++++.....+
T Consensus 203 ~L~~~GF~l~e~i~L~p 219 (233)
T 4df3_A 203 TLMDGGLEIKDVVHLDP 219 (233)
T ss_dssp HHHHTTCCEEEEEECTT
T ss_pred HHHHCCCEEEEEEccCC
Confidence 78899999999888755
No 97
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.67 E-value=1.5e-15 Score=107.14 Aligned_cols=120 Identities=15% Similarity=0.208 Sum_probs=95.3
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCccc---CCCc
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQF---IPPS 74 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~---~~~~ 74 (180)
+++.+. ..++.+|||+|||+|.++..+++..|..+++++|+++ +++.+++ ..++++.++|..+. .+.|
T Consensus 32 ~l~~l~--~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 109 (204)
T 3e05_A 32 TLSKLR--LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDP 109 (204)
T ss_dssp HHHHTT--CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCC
T ss_pred HHHHcC--CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCC
Confidence 344455 6778999999999999999999998889999999965 8888864 36899999998653 2469
Q ss_pred cEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHH
Q 030291 75 DAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGS 154 (180)
Q Consensus 75 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (180)
|+|++...++ +.. .+++++.++|+| ||.+++..... .+.+++.+
T Consensus 110 D~i~~~~~~~---~~~--~~l~~~~~~Lkp---gG~l~~~~~~~----------------------------~~~~~~~~ 153 (204)
T 3e05_A 110 DRVFIGGSGG---MLE--EIIDAVDRRLKS---EGVIVLNAVTL----------------------------DTLTKAVE 153 (204)
T ss_dssp SEEEESCCTT---CHH--HHHHHHHHHCCT---TCEEEEEECBH----------------------------HHHHHHHH
T ss_pred CEEEECCCCc---CHH--HHHHHHHHhcCC---CeEEEEEeccc----------------------------ccHHHHHH
Confidence 9999988775 333 789999999999 89888854321 13467778
Q ss_pred HHHHcCCe
Q 030291 155 LFVNAGFT 162 (180)
Q Consensus 155 ~l~~aGf~ 162 (180)
.++++||.
T Consensus 154 ~l~~~g~~ 161 (204)
T 3e05_A 154 FLEDHGYM 161 (204)
T ss_dssp HHHHTTCE
T ss_pred HHHHCCCc
Confidence 88999983
No 98
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.66 E-value=1.4e-16 Score=113.14 Aligned_cols=100 Identities=17% Similarity=0.276 Sum_probs=83.3
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----CCCeeEEecCCcccC--CCccEEEecccccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----TDNLKYIEGDMFQFI--PPSDAFFFKTVFHF 85 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----~~~~~~~~~d~~~~~--~~~D~v~~~~~l~~ 85 (180)
..++.+|||||||+|.++..+++.. .+++++|+++ +++.+++ ..++++.++|+.+.. ..||+|+++.+++|
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~ 126 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEVLYY 126 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEEESCGGG
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEEccHHHh
Confidence 4567899999999999999998884 5899999966 8877764 458999999996633 36999999999999
Q ss_pred CChH-HHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 86 FDDE-DCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 86 ~~~~-~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
++++ ....+++++.++|+| ||.+++....
T Consensus 127 ~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~ 156 (216)
T 3ofk_A 127 LEDMTQMRTAIDNMVKMLAP---GGHLVFGSAR 156 (216)
T ss_dssp SSSHHHHHHHHHHHHHTEEE---EEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHcCC---CCEEEEEecC
Confidence 9974 455889999999999 8888887653
No 99
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.66 E-value=4.5e-16 Score=111.58 Aligned_cols=146 Identities=10% Similarity=-0.002 Sum_probs=90.3
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCc-h-hhccC---CC------CCCeeEEecCCcccCC-CccEEEec
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLP-H-AVTDM---PQ------TDNLKYIEGDMFQFIP-PSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~-~-~~~~a---~~------~~~~~~~~~d~~~~~~-~~D~v~~~ 80 (180)
.+++.+|||||||+|.++..+++..++.+++++|++ + |++.| ++ ..++.+.++|+.+... .+|.|.+.
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i 101 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSI 101 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEE
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEE
Confidence 356789999999999999999988889999999997 6 65444 43 3579999999854311 24555444
Q ss_pred cccccCChH------HHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHH
Q 030291 81 TVFHFFDDE------DCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGS 154 (180)
Q Consensus 81 ~~l~~~~~~------~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (180)
.+...++.. ....++++++++||| ||.+++....... ... . . ................+++.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~r~Lkp---GG~l~i~~~~~~~--~~~-~-~----~~~~~~~~~~~~~~~~~el~~ 170 (225)
T 3p2e_A 102 SILFPWGTLLEYVIKPNRDILSNVADLAKK---EAHFEFVTTYSDS--YEE-A-E----IKKRGLPLLSKAYFLSEQYKA 170 (225)
T ss_dssp EEESCCHHHHHHHHTTCHHHHHHHHTTEEE---EEEEEEEECCCC----------------------CCHHHHHSHHHHH
T ss_pred EEeCCCcHHhhhhhcchHHHHHHHHHhcCC---CcEEEEEEecccc--chh-c-h----hhhcCCCCCChhhcchHHHHH
Confidence 333222211 012679999999999 8888884432222 100 0 0 000000000001112235999
Q ss_pred HHHHcCCeEEEEeec
Q 030291 155 LFVNAGFTHYKIAPI 169 (180)
Q Consensus 155 ~l~~aGf~~~~~~~~ 169 (180)
.++++||++.+....
T Consensus 171 ~l~~aGf~v~~~~~~ 185 (225)
T 3p2e_A 171 ELSNSGFRIDDVKEL 185 (225)
T ss_dssp HHHHHTCEEEEEEEE
T ss_pred HHHHcCCCeeeeeec
Confidence 999999998887654
No 100
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.65 E-value=4.4e-16 Score=113.58 Aligned_cols=105 Identities=13% Similarity=0.086 Sum_probs=80.9
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC--C-CCeeEEecCCc-----ccCCCcc
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ--T-DNLKYIEGDMF-----QFIPPSD 75 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~--~-~~~~~~~~d~~-----~~~~~~D 75 (180)
+++.+. +.++.+|||||||+|.++..+++. +.+++++|+++ |++.+++ . ..+.....+.. ...+.||
T Consensus 37 il~~l~--l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD 112 (261)
T 3iv6_A 37 DIFLEN--IVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFD 112 (261)
T ss_dssp HHHTTT--CCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCS
T ss_pred HHHhcC--CCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCcc
Confidence 445555 677889999999999999999987 66899999976 9988875 1 12222222221 1124699
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 76 AFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 76 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
+|+++.++||+..++...+++++.++| | ||.++++...
T Consensus 113 ~Vv~~~~l~~~~~~~~~~~l~~l~~lL-P---GG~l~lS~~~ 150 (261)
T 3iv6_A 113 FVLNDRLINRFTTEEARRACLGMLSLV-G---SGTVRASVKL 150 (261)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHH-T---TSEEEEEEEB
T ss_pred EEEEhhhhHhCCHHHHHHHHHHHHHhC-c---CcEEEEEecc
Confidence 999999999998888788999999999 9 9999987543
No 101
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.63 E-value=1.6e-15 Score=124.25 Aligned_cols=101 Identities=10% Similarity=0.157 Sum_probs=85.0
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHC-CCCeEEEeeCch-hhccCCC------------CCCeeEEecCCcc-c--CCCcc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAF-PGIKCTVLDLPH-AVTDMPQ------------TDNLKYIEGDMFQ-F--IPPSD 75 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~~~~D~~~-~~~~a~~------------~~~~~~~~~d~~~-~--~~~~D 75 (180)
..++.+|||||||+|.++..+++.. +..+++++|+++ +++.|++ ..++++.++|+.+ + ...||
T Consensus 719 ~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFD 798 (950)
T 3htx_A 719 ESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVD 798 (950)
T ss_dssp HSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCC
T ss_pred ccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCee
Confidence 3478899999999999999999887 457999999976 8888754 2579999999965 2 23699
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 76 AFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 76 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
+|++..+++|++++....+++++.++|+| | .+++..++
T Consensus 799 lVV~~eVLeHL~dp~l~~~L~eI~RvLKP---G-~LIISTPN 836 (950)
T 3htx_A 799 IGTCLEVIEHMEEDQACEFGEKVLSLFHP---K-LLIVSTPN 836 (950)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTTCC---S-EEEEEECB
T ss_pred EEEEeCchhhCChHHHHHHHHHHHHHcCC---C-EEEEEecC
Confidence 99999999999998877899999999999 5 77776654
No 102
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.63 E-value=6.9e-16 Score=115.66 Aligned_cols=100 Identities=18% Similarity=0.177 Sum_probs=80.1
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------------CCCeeEEecCCccc-----C--C
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------------TDNLKYIEGDMFQF-----I--P 72 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------------~~~~~~~~~d~~~~-----~--~ 72 (180)
+++.+|||||||+|.++..+++. +..+++++|+++ +++.+++ ..++++.++|+.+. . +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 46789999999999999998874 477999999966 8887764 12789999999652 2 2
Q ss_pred --CccEEEeccccccC-Ch-HHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 73 --PSDAFFFKTVFHFF-DD-EDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 73 --~~D~v~~~~~l~~~-~~-~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
.||+|+++.++||+ .+ +....+++++.++|+| ||.+++..+.
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkp---gG~li~~~~~ 157 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSP---GGYFIGTTPN 157 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEE---EEEEEEEEEC
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCC---CcEEEEecCC
Confidence 69999999999998 33 4455899999999999 8888887654
No 103
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.62 E-value=1.4e-14 Score=102.69 Aligned_cols=136 Identities=12% Similarity=0.125 Sum_probs=92.7
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hh----ccCCCCCCeeEEecCCccc------CCCccEEEecc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AV----TDMPQTDNLKYIEGDMFQF------IPPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~----~~a~~~~~~~~~~~d~~~~------~~~~D~v~~~~ 81 (180)
++++.+|||+|||+|..+..+++..+..+++++|+++ ++ +.+++..++.+..+|.... ...||+|+++.
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 134 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDI 134 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEec
Confidence 5678899999999999999999987667899999965 54 3343356888888888542 13699999873
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHH----HHHH
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWG----SLFV 157 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~ 157 (180)
.+ ......+++++.++||| ||.+++.-...+ .+ ...+.+++. +.++
T Consensus 135 -~~---~~~~~~~l~~~~r~Lkp---gG~l~i~~~~~~--------------~~---------~~~~~~~~~~~~~~~l~ 184 (210)
T 1nt2_A 135 -AQ---KNQIEILKANAEFFLKE---KGEVVIMVKARS--------------ID---------STAEPEEVFKSVLKEME 184 (210)
T ss_dssp -CS---TTHHHHHHHHHHHHEEE---EEEEEEEEEHHH--------------HC---------TTSCHHHHHHHHHHHHH
T ss_pred -cC---hhHHHHHHHHHHHHhCC---CCEEEEEEecCC--------------cc---------ccCCHHHHHHHHHHHHH
Confidence 22 12223569999999999 888888732110 00 011223321 2378
Q ss_pred HcCCeEEEEeecCC---ceeEEEEe
Q 030291 158 NAGFTHYKIAPIFG---IKSLIEVY 179 (180)
Q Consensus 158 ~aGf~~~~~~~~~~---~~~~~~~~ 179 (180)
++ |++++.....+ .+.++.++
T Consensus 185 ~~-f~~~~~~~~~p~~~~h~~~~~~ 208 (210)
T 1nt2_A 185 GD-FKIVKHGSLMPYHRDHIFIHAY 208 (210)
T ss_dssp TT-SEEEEEEECTTTCTTEEEEEEE
T ss_pred hh-cEEeeeecCCCCCCCcEEEEEE
Confidence 88 99999887733 44555554
No 104
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.61 E-value=1e-14 Score=107.48 Aligned_cols=134 Identities=18% Similarity=0.228 Sum_probs=101.5
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCcccC--CCccEEEecc---
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQFI--PPSDAFFFKT--- 81 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~~--~~~D~v~~~~--- 81 (180)
.++.+|||+|||+|.++..+++..|..+++++|+++ +++.+++ ..++++.++|+.+.. ..||+|+++-
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~fD~Iv~npPy~ 187 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVSNPPYI 187 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCCEEEEEECCCCB
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccCCccEEEECCCCC
Confidence 456799999999999999999998899999999966 8887764 247999999997644 3699999973
Q ss_pred ----------ccccCCh----------HHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEee
Q 030291 82 ----------VFHFFDD----------EDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFN 141 (180)
Q Consensus 82 ----------~l~~~~~----------~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (180)
+++|.+. .....+++++.+.|+| ||.+++..
T Consensus 188 ~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lkp---gG~l~~~~-------------------------- 238 (276)
T 2b3t_A 188 DEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVS---GGFLLLEH-------------------------- 238 (276)
T ss_dssp CTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEE---EEEEEEEC--------------------------
T ss_pred CccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCC---CCEEEEEE--------------------------
Confidence 3333331 2345789999999999 77777631
Q ss_pred cCCcccCHHHHHHHHHHcCCeEEEEee-cCCceeEEEEe
Q 030291 142 VGGKERTEQEWGSLFVNAGFTHYKIAP-IFGIKSLIEVY 179 (180)
Q Consensus 142 ~~~~~~~~~~~~~~l~~aGf~~~~~~~-~~~~~~~~~~~ 179 (180)
...+.+++.++++++||+.+++.. ..+...++.++
T Consensus 239 ---~~~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~ 274 (276)
T 2b3t_A 239 ---GWQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGR 274 (276)
T ss_dssp ---CSSCHHHHHHHHHHTTCTTCCEEECTTSSEEEEEEE
T ss_pred ---CchHHHHHHHHHHHCCCcEEEEEecCCCCCcEEEEE
Confidence 112457889999999999777654 45555555543
No 105
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.61 E-value=1e-15 Score=105.43 Aligned_cols=100 Identities=11% Similarity=0.221 Sum_probs=80.1
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcccC----C
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQFI----P 72 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~~----~ 72 (180)
+++.+. ..++.+|||+|||+|.++..+++.+|+.+++++|+++ +++.+++ ..++ ++.+|..+.. +
T Consensus 17 ~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~ 93 (178)
T 3hm2_A 17 AISALA--PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPD 93 (178)
T ss_dssp HHHHHC--CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCS
T ss_pred HHHHhc--ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCC
Confidence 344444 5678899999999999999999998889999999966 8887764 2377 7888875522 4
Q ss_pred CccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 73 PSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 73 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
.||+|++...+++ . .+++++.++|+| ||.+++...
T Consensus 94 ~~D~i~~~~~~~~----~--~~l~~~~~~L~~---gG~l~~~~~ 128 (178)
T 3hm2_A 94 NPDVIFIGGGLTA----P--GVFAAAWKRLPV---GGRLVANAV 128 (178)
T ss_dssp CCSEEEECC-TTC----T--THHHHHHHTCCT---TCEEEEEEC
T ss_pred CCCEEEECCcccH----H--HHHHHHHHhcCC---CCEEEEEee
Confidence 6999999999887 2 779999999999 899888653
No 106
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.61 E-value=8.6e-15 Score=105.29 Aligned_cols=133 Identities=11% Similarity=0.101 Sum_probs=90.5
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHC-CCCeEEEeeCch-h----hccCCCCCCeeEEecCCccc------CCCccEEEec
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAF-PGIKCTVLDLPH-A----VTDMPQTDNLKYIEGDMFQF------IPPSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~~~~D~~~-~----~~~a~~~~~~~~~~~d~~~~------~~~~D~v~~~ 80 (180)
+.++.+|||+|||+|.++..+++.. +..+++++|+++ + ++.+++..++++.++|+.+. ...||+|++.
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEEC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEc
Confidence 6678899999999999999999885 667999999964 4 44444457899999999652 2369999985
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcC
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAG 160 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 160 (180)
.. .......++.++.++|+| ||.+++. ......... ... ...+. .+ .+.|+++|
T Consensus 155 ~~----~~~~~~~~~~~~~~~Lkp---gG~l~i~-~~~~~~~~~---------~~~-------~~~~~-~~-~~~l~~~G 208 (233)
T 2ipx_A 155 VA----QPDQTRIVALNAHTFLRN---GGHFVIS-IKANCIDST---------ASA-------EAVFA-SE-VKKMQQEN 208 (233)
T ss_dssp CC----CTTHHHHHHHHHHHHEEE---EEEEEEE-EEHHHHCSS---------SCH-------HHHHH-HH-HHTTGGGT
T ss_pred CC----CccHHHHHHHHHHHHcCC---CeEEEEE-EcccccccC---------CCH-------HHHHH-HH-HHHHHHCC
Confidence 44 222223568899999999 8888773 322100000 000 00011 23 48889999
Q ss_pred CeEEEEeecCC
Q 030291 161 FTHYKIAPIFG 171 (180)
Q Consensus 161 f~~~~~~~~~~ 171 (180)
|++++......
T Consensus 209 f~~~~~~~~~~ 219 (233)
T 2ipx_A 209 MKPQEQLTLEP 219 (233)
T ss_dssp EEEEEEEECTT
T ss_pred CceEEEEecCC
Confidence 99988766543
No 107
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.60 E-value=9.5e-15 Score=106.49 Aligned_cols=126 Identities=18% Similarity=0.218 Sum_probs=98.8
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCcccC--CCccEEEeccccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQFI--PPSDAFFFKTVFH 84 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~~~--~~~D~v~~~~~l~ 84 (180)
..++.+|||+|||+|.++..+++..+ +++++|+++ +++.+++ ...+++.++|..+.. ..||+|+++...+
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVANLYAE 195 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEECCHH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEECCcHH
Confidence 35678999999999999999888754 899999965 8877764 112889999886533 4699999976544
Q ss_pred cCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEE
Q 030291 85 FFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHY 164 (180)
Q Consensus 85 ~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 164 (180)
+ ...+++++.++|+| ||.+++++... .+.+++.+.++++||+++
T Consensus 196 ~-----~~~~l~~~~~~Lkp---gG~lils~~~~----------------------------~~~~~v~~~l~~~Gf~~~ 239 (254)
T 2nxc_A 196 L-----HAALAPRYREALVP---GGRALLTGILK----------------------------DRAPLVREAMAGAGFRPL 239 (254)
T ss_dssp H-----HHHHHHHHHHHEEE---EEEEEEEEEEG----------------------------GGHHHHHHHHHHTTCEEE
T ss_pred H-----HHHHHHHHHHHcCC---CCEEEEEeecc----------------------------CCHHHHHHHHHHCCCEEE
Confidence 2 34789999999999 88888865422 135788999999999999
Q ss_pred EEeecCCceeEE
Q 030291 165 KIAPIFGIKSLI 176 (180)
Q Consensus 165 ~~~~~~~~~~~~ 176 (180)
++....++..+.
T Consensus 240 ~~~~~~~W~~l~ 251 (254)
T 2nxc_A 240 EEAAEGEWVLLA 251 (254)
T ss_dssp EEEEETTEEEEE
T ss_pred EEeccCCeEEEE
Confidence 998887776654
No 108
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.60 E-value=5.4e-15 Score=102.86 Aligned_cols=104 Identities=13% Similarity=0.284 Sum_probs=82.2
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CC--CeeEEecCCcccC--CC
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TD--NLKYIEGDMFQFI--PP 73 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~--~~~~~~~d~~~~~--~~ 73 (180)
+++.+. ..++.+|||+|||+|.++..+++. ..+++++|+++ +++.+++ .. ++++.++|+.+.. ..
T Consensus 44 l~~~~~--~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 119 (194)
T 1dus_A 44 LVENVV--VDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRK 119 (194)
T ss_dssp HHHHCC--CCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTSC
T ss_pred HHHHcc--cCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccCC
Confidence 445555 567889999999999999999888 77899999965 8777764 23 3999999996643 36
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 74 SDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 74 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
||+|+++..+++. ......+++++.++|+| ||.+++...
T Consensus 120 ~D~v~~~~~~~~~-~~~~~~~l~~~~~~L~~---gG~l~~~~~ 158 (194)
T 1dus_A 120 YNKIITNPPIRAG-KEVLHRIIEEGKELLKD---NGEIWVVIQ 158 (194)
T ss_dssp EEEEEECCCSTTC-HHHHHHHHHHHHHHEEE---EEEEEEEEE
T ss_pred ceEEEECCCcccc-hhHHHHHHHHHHHHcCC---CCEEEEEEC
Confidence 9999998887752 33445889999999999 888888764
No 109
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.59 E-value=4.5e-14 Score=101.26 Aligned_cols=134 Identities=11% Similarity=0.061 Sum_probs=90.3
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHH-CCCCeEEEeeCch-hh----ccCCCCCCeeEEecCCccc------CCCccEEEec
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEA-FPGIKCTVLDLPH-AV----TDMPQTDNLKYIEGDMFQF------IPPSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~-~~~~~~~~~D~~~-~~----~~a~~~~~~~~~~~d~~~~------~~~~D~v~~~ 80 (180)
++++.+|||+|||+|.++..+++. .+..+++++|+++ ++ +.+++..|+.+.++|+..+ .+.||+|++.
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d 153 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVD 153 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEec
Confidence 678999999999999999999876 4677999999965 64 3333457899999998542 1369999987
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcC
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAG 160 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 160 (180)
... ++.. ..+...+.++||| ||.++++....... . +... . -..++....|+++|
T Consensus 154 ~a~---~~~~-~il~~~~~~~Lkp---GG~lvisik~~~~d--------------~---t~~~-~-e~~~~~~~~L~~~g 207 (232)
T 3id6_C 154 IAQ---PDQT-DIAIYNAKFFLKV---NGDMLLVIKARSID--------------V---TKDP-K-EIYKTEVEKLENSN 207 (232)
T ss_dssp CCC---TTHH-HHHHHHHHHHEEE---EEEEEEEEC------------------------CCS-S-SSTTHHHHHHHHTT
T ss_pred CCC---hhHH-HHHHHHHHHhCCC---CeEEEEEEccCCcc--------------c---CCCH-H-HHHHHHHHHHHHCC
Confidence 553 3332 1334556669999 89888873221100 0 0000 0 01134556788899
Q ss_pred CeEEEEeecCCc
Q 030291 161 FTHYKIAPIFGI 172 (180)
Q Consensus 161 f~~~~~~~~~~~ 172 (180)
|++++.....+.
T Consensus 208 f~~~~~~~l~p~ 219 (232)
T 3id6_C 208 FETIQIINLDPY 219 (232)
T ss_dssp EEEEEEEECTTT
T ss_pred CEEEEEeccCCC
Confidence 999999887543
No 110
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.59 E-value=6.2e-15 Score=106.54 Aligned_cols=121 Identities=17% Similarity=0.206 Sum_probs=92.2
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCcc-c-----CCCccEEEe
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQ-F-----IPPSDAFFF 79 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~-~-----~~~~D~v~~ 79 (180)
++++.+|||||||+|..+..++...++.+++++|+++ +++.+++ ..+++++++|+.+ . ...||+|++
T Consensus 68 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 68 FNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp GGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred cCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEE
Confidence 3567899999999999999999888889999999966 8887764 3479999999855 2 236999999
Q ss_pred ccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHc
Q 030291 80 KTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNA 159 (180)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 159 (180)
..+ .+.. .+++.+.++|+| ||.+++..... . ....+++.+.+++.
T Consensus 148 ~~~----~~~~--~~l~~~~~~Lkp---gG~l~~~~g~~----~----------------------~~~~~~~~~~l~~~ 192 (240)
T 1xdz_A 148 RAV----ARLS--VLSELCLPLVKK---NGLFVALKAAS----A----------------------EEELNAGKKAITTL 192 (240)
T ss_dssp ECC----SCHH--HHHHHHGGGEEE---EEEEEEEECC-----C----------------------HHHHHHHHHHHHHT
T ss_pred ecc----CCHH--HHHHHHHHhcCC---CCEEEEEeCCC----c----------------------hHHHHHHHHHHHHc
Confidence 763 3444 889999999999 88887753100 0 00135677889999
Q ss_pred CCeEEEEee
Q 030291 160 GFTHYKIAP 168 (180)
Q Consensus 160 Gf~~~~~~~ 168 (180)
||++.++..
T Consensus 193 g~~~~~~~~ 201 (240)
T 1xdz_A 193 GGELENIHS 201 (240)
T ss_dssp TEEEEEEEE
T ss_pred CCeEeEEEE
Confidence 999877654
No 111
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.59 E-value=8.5e-16 Score=108.71 Aligned_cols=125 Identities=17% Similarity=0.206 Sum_probs=83.1
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCCC-----CCeeEEecCCccc--C-----CCccEEEec
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQT-----DNLKYIEGDMFQF--I-----PPSDAFFFK 80 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~-----~~~~~~~~d~~~~--~-----~~~D~v~~~ 80 (180)
.++.+|||+|||+|.++..+++.+++.+++++|+++ +++.+++. .++++.++|+.+. . ..||+|+++
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSN 108 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEEC
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEEC
Confidence 678899999999999999999999888999999965 88888761 1678888888652 2 579999996
Q ss_pred ccccc------CChHHH------------------HHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccce
Q 030291 81 TVFHF------FDDEDC------------------LKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDI 136 (180)
Q Consensus 81 ~~l~~------~~~~~~------------------~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (180)
-.++. ++.... ..+++++.++|+| ||.+++.+..
T Consensus 109 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~------------------- 166 (215)
T 4dzr_A 109 PPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLAR---GRAGVFLEVG------------------- 166 (215)
T ss_dssp CCCCC------------------------CTTHHHHHHHTCCGGGBCS---SSEEEEEECT-------------------
T ss_pred CCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcC---CCeEEEEEEC-------------------
Confidence 44432 222211 5789999999999 8885554421
Q ss_pred eeEeecCCcccCHHHHHHHHH--HcCCeEEEEeec
Q 030291 137 FMNFNVGGKERTEQEWGSLFV--NAGFTHYKIAPI 169 (180)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~--~aGf~~~~~~~~ 169 (180)
....+++.+.++ ++||..+++...
T Consensus 167 ---------~~~~~~~~~~l~~~~~gf~~~~~~~~ 192 (215)
T 4dzr_A 167 ---------HNQADEVARLFAPWRERGFRVRKVKD 192 (215)
T ss_dssp ---------TSCHHHHHHHTGGGGGGTEECCEEEC
T ss_pred ---------CccHHHHHHHHHHhhcCCceEEEEEe
Confidence 113466778888 889987766654
No 112
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.58 E-value=1e-14 Score=107.67 Aligned_cols=96 Identities=14% Similarity=0.236 Sum_probs=79.0
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCcc-cCCCccEEEeccccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQ-FIPPSDAFFFKTVFH 84 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~-~~~~~D~v~~~~~l~ 84 (180)
++++.+|||||||+|.++..++...++++++++|+++ +++.|++ ..++++.++|..+ +...||+|++...
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~~a~-- 197 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMVAAL-- 197 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEECTT--
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEECCC--
Confidence 6789999999999998776666666799999999965 9998875 3689999999965 3347999998655
Q ss_pred cCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 85 FFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 85 ~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
.++.. ++++++.++||| ||.+++.+.
T Consensus 198 -~~d~~--~~l~el~r~LkP---GG~Lvv~~~ 223 (298)
T 3fpf_A 198 -AEPKR--RVFRNIHRYVDT---ETRIIYRTY 223 (298)
T ss_dssp -CSCHH--HHHHHHHHHCCT---TCEEEEEEC
T ss_pred -ccCHH--HHHHHHHHHcCC---CcEEEEEcC
Confidence 35555 889999999999 999998763
No 113
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.58 E-value=2.8e-15 Score=107.39 Aligned_cols=114 Identities=11% Similarity=0.096 Sum_probs=88.0
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-CCCeeEEecCCcc--cC---CCccEEEecccccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-TDNLKYIEGDMFQ--FI---PPSDAFFFKTVFHF 85 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-~~~~~~~~~d~~~--~~---~~~D~v~~~~~l~~ 85 (180)
.+++.+|||||||+|.++..+++. +.+++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|+++
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~----- 118 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR----- 118 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE-----
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC-----
Confidence 356789999999999999999988 67899999966 8888876 5789999999954 22 369999987
Q ss_pred CChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEEE
Q 030291 86 FDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHYK 165 (180)
Q Consensus 86 ~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 165 (180)
.+.. .+++++.++|+| ||.++.. ....+.+++.+.++++||+.+.
T Consensus 119 -~~~~--~~l~~~~~~Lkp---gG~l~~~-----------------------------~~~~~~~~~~~~l~~~Gf~~~~ 163 (226)
T 3m33_A 119 -RGPT--SVILRLPELAAP---DAHFLYV-----------------------------GPRLNVPEVPERLAAVGWDIVA 163 (226)
T ss_dssp -SCCS--GGGGGHHHHEEE---EEEEEEE-----------------------------ESSSCCTHHHHHHHHTTCEEEE
T ss_pred -CCHH--HHHHHHHHHcCC---CcEEEEe-----------------------------CCcCCHHHHHHHHHHCCCeEEE
Confidence 2333 779999999999 7777710 0123456788888888888776
Q ss_pred Eee
Q 030291 166 IAP 168 (180)
Q Consensus 166 ~~~ 168 (180)
+..
T Consensus 164 ~~~ 166 (226)
T 3m33_A 164 EDH 166 (226)
T ss_dssp EEE
T ss_pred EEe
Confidence 653
No 114
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.58 E-value=4e-15 Score=102.58 Aligned_cols=96 Identities=11% Similarity=0.130 Sum_probs=76.1
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----C--CCeeEEecCCcccC--CCccEEEeccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----T--DNLKYIEGDMFQFI--PPSDAFFFKTV 82 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~--~~~~~~~~d~~~~~--~~~D~v~~~~~ 82 (180)
++++.+|||+|||+|.++..+....|+++++++|+++ |++.+++ . .++++ .|..... ..||+|++..+
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~ 124 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKM 124 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETC
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhH
Confidence 4678999999999999999999999999999999976 9888875 2 24544 5664432 35999999999
Q ss_pred cccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 83 FHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 83 l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
+|++++.+ ..+.++.+.|+| |+++++-+
T Consensus 125 LHlL~~~~--~al~~v~~~L~p----ggvfISfp 152 (200)
T 3fzg_A 125 LPVLKQQD--VNILDFLQLFHT----QNFVISFP 152 (200)
T ss_dssp HHHHHHTT--CCHHHHHHTCEE----EEEEEEEE
T ss_pred HHhhhhhH--HHHHHHHHHhCC----CCEEEEeC
Confidence 99994444 557799999999 55555443
No 115
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.57 E-value=4.6e-15 Score=109.03 Aligned_cols=96 Identities=17% Similarity=0.305 Sum_probs=77.8
Q ss_pred CCCeEEEeCCcccH----HHHHHHHHCC----CCeEEEeeCch-hhccCCCC----------------------------
Q 030291 15 GLRSMVDVGGGTGA----FARIISEAFP----GIKCTVLDLPH-AVTDMPQT---------------------------- 57 (180)
Q Consensus 15 ~~~~iLdiG~G~G~----~~~~l~~~~~----~~~~~~~D~~~-~~~~a~~~---------------------------- 57 (180)
++.+|+|+|||+|. ++..+++..+ +.+++++|+++ |++.|++.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35799999999998 4555666643 46899999976 88887641
Q ss_pred ---------CCeeEEecCCcc-cC---CCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEE
Q 030291 58 ---------DNLKYIEGDMFQ-FI---PPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLI 113 (180)
Q Consensus 58 ---------~~~~~~~~d~~~-~~---~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~ 113 (180)
.+++|.++|+.+ +. +.||+|+|..+++|++++.+.++++++.++|+| ||.+++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~p---gG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKP---DGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEE---EEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCC---CcEEEE
Confidence 258899999976 23 369999999999999998888999999999999 777766
No 116
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.57 E-value=7.2e-14 Score=99.98 Aligned_cols=140 Identities=14% Similarity=0.111 Sum_probs=96.0
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHC-CCCeEEEeeCch-hhccCC----CCCCeeEEecCCccc------CCCccEEEec
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAF-PGIKCTVLDLPH-AVTDMP----QTDNLKYIEGDMFQF------IPPSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~~~~D~~~-~~~~a~----~~~~~~~~~~d~~~~------~~~~D~v~~~ 80 (180)
+.++.+|||+|||+|.++..+++.. +..+++++|.++ +++.++ +..++++.++|+.+. ...||+|++.
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 5678899999999999999999874 567999999965 655543 347899999999652 1259999976
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcC
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAG 160 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 160 (180)
.. .++ ....++.++.++|+| ||.+++. ......... . .......+++.++ +++
T Consensus 151 ~~---~~~-~~~~~l~~~~~~Lkp---gG~l~~~-~~~~~~~~~---------~--------~~~~~~~~~l~~l-~~~- 203 (227)
T 1g8a_A 151 VA---QPT-QAKILIDNAEVYLKR---GGYGMIA-VKSRSIDVT---------K--------EPEQVFREVEREL-SEY- 203 (227)
T ss_dssp CC---STT-HHHHHHHHHHHHEEE---EEEEEEE-EEGGGTCTT---------S--------CHHHHHHHHHHHH-HTT-
T ss_pred CC---CHh-HHHHHHHHHHHhcCC---CCEEEEE-EecCCCCCC---------C--------ChhhhhHHHHHHH-Hhh-
Confidence 54 122 222559999999999 8888887 322111000 0 0012245667666 777
Q ss_pred CeEEEEeecCCc---eeEEEEe
Q 030291 161 FTHYKIAPIFGI---KSLIEVY 179 (180)
Q Consensus 161 f~~~~~~~~~~~---~~~~~~~ 179 (180)
|++++.....+. +.++.++
T Consensus 204 f~~~~~~~~~~~~~~~~~~~~~ 225 (227)
T 1g8a_A 204 FEVIERLNLEPYEKDHALFVVR 225 (227)
T ss_dssp SEEEEEEECTTTSSSEEEEEEE
T ss_pred ceeeeEeccCcccCCCEEEEEE
Confidence 999988877554 5555554
No 117
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.57 E-value=4.1e-14 Score=101.37 Aligned_cols=128 Identities=16% Similarity=0.172 Sum_probs=93.6
Q ss_pred ccCCCeEEEeCCc-ccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCc--ccC--CCccEEEecc
Q 030291 13 FQGLRSMVDVGGG-TGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMF--QFI--PPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G-~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~--~~~--~~~D~v~~~~ 81 (180)
++++.+|||+||| +|.++..+++.. ..+++++|+++ +++.+++ ..++++.++|.. ... ..||+|+++-
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~np 131 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAP 131 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECC
Confidence 4678999999999 999999998886 67899999966 8888864 237999999952 232 4699999986
Q ss_pred ccccCChHH-----------------HHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCC
Q 030291 82 VFHFFDDED-----------------CLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGG 144 (180)
Q Consensus 82 ~l~~~~~~~-----------------~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (180)
.+++.++.. ...+++++.++|+| ||.+++.....
T Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~-------------------------- 182 (230)
T 3evz_A 132 PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNP---GGKVALYLPDK-------------------------- 182 (230)
T ss_dssp CCC---------------CCSSSCHHHHHHHHHHGGGEEE---EEEEEEEEESC--------------------------
T ss_pred CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCC---CeEEEEEeccc--------------------------
Confidence 665543311 24789999999999 88888853210
Q ss_pred cccCHHHHHHHHHHcCCeEEEEeecCC
Q 030291 145 KERTEQEWGSLFVNAGFTHYKIAPIFG 171 (180)
Q Consensus 145 ~~~~~~~~~~~l~~aGf~~~~~~~~~~ 171 (180)
....+++.+.+++.||++..+....+
T Consensus 183 -~~~~~~~~~~l~~~g~~~~~~~~~~g 208 (230)
T 3evz_A 183 -EKLLNVIKERGIKLGYSVKDIKFKVG 208 (230)
T ss_dssp -HHHHHHHHHHHHHTTCEEEEEEECCC
T ss_pred -HhHHHHHHHHHHHcCCceEEEEecCC
Confidence 11346788899999998776654433
No 118
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.57 E-value=2.8e-14 Score=100.76 Aligned_cols=120 Identities=15% Similarity=0.231 Sum_probs=92.4
Q ss_pred cccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CC-CeeEEecCCccc---CCCc
Q 030291 6 VKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TD-NLKYIEGDMFQF---IPPS 74 (180)
Q Consensus 6 ~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~-~~~~~~~d~~~~---~~~~ 74 (180)
++.+. ..++.+|||+|||+|.++..+++. +.+++++|+++ +++.+++ .. ++++.++|+.+. .+.|
T Consensus 48 l~~l~--~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~ 123 (204)
T 3njr_A 48 LAALA--PRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLP 123 (204)
T ss_dssp HHHHC--CCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCC
T ss_pred HHhcC--CCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCC
Confidence 34444 567889999999999999999888 77899999965 8888764 23 899999999662 3479
Q ss_pred cEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHH
Q 030291 75 DAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGS 154 (180)
Q Consensus 75 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (180)
|+|++...+ +. . +++++.++|+| ||.+++..... -+..++.+
T Consensus 124 D~v~~~~~~----~~--~-~l~~~~~~Lkp---gG~lv~~~~~~----------------------------~~~~~~~~ 165 (204)
T 3njr_A 124 EAVFIGGGG----SQ--A-LYDRLWEWLAP---GTRIVANAVTL----------------------------ESETLLTQ 165 (204)
T ss_dssp SEEEECSCC----CH--H-HHHHHHHHSCT---TCEEEEEECSH----------------------------HHHHHHHH
T ss_pred CEEEECCcc----cH--H-HHHHHHHhcCC---CcEEEEEecCc----------------------------ccHHHHHH
Confidence 999987754 22 2 79999999999 89888855311 13466777
Q ss_pred HHHHcCCeEEEEe
Q 030291 155 LFVNAGFTHYKIA 167 (180)
Q Consensus 155 ~l~~aGf~~~~~~ 167 (180)
.+++.|+++.++.
T Consensus 166 ~l~~~g~~i~~i~ 178 (204)
T 3njr_A 166 LHARHGGQLLRID 178 (204)
T ss_dssp HHHHHCSEEEEEE
T ss_pred HHHhCCCcEEEEE
Confidence 8888898877654
No 119
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.57 E-value=2.4e-16 Score=113.78 Aligned_cols=96 Identities=10% Similarity=0.069 Sum_probs=74.8
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCcc---cC--CCccEEEe---
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQ---FI--PPSDAFFF--- 79 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~---~~--~~~D~v~~--- 79 (180)
.++.+|||||||+|..+..+++..+ .+++++|+++ +++.+++ ..++.+..+|..+ .. ..||.|+.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence 5678999999999999999887764 5899999965 8888864 4577888888743 22 35998874
Q ss_pred --ccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 80 --KTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 80 --~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
...++|.++.. .++++++++||| ||.+.+.+
T Consensus 138 ~~~~~~~~~~~~~--~~~~e~~rvLkP---GG~l~f~~ 170 (236)
T 3orh_A 138 PLSEETWHTHQFN--FIKNHAFRLLKP---GGVLTYCN 170 (236)
T ss_dssp CCBGGGTTTHHHH--HHHHTHHHHEEE---EEEEEECC
T ss_pred ecccchhhhcchh--hhhhhhhheeCC---CCEEEEEe
Confidence 45566666666 789999999999 88777643
No 120
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.57 E-value=5e-14 Score=100.00 Aligned_cols=98 Identities=16% Similarity=0.235 Sum_probs=77.4
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCcc-c--C--CCccEEEeccc
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQ-F--I--PPSDAFFFKTV 82 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~-~--~--~~~D~v~~~~~ 82 (180)
++.+|||||||+|.++..+++..|+.+++++|++. ++..+++ ..+++++++|+.+ . . ..||+|+++..
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 46789999999999999999999999999999965 8887764 3689999999965 1 2 25999999865
Q ss_pred cccCChH------HHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 83 FHFFDDE------DCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 83 l~~~~~~------~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
..+.... ....+++++.++|+| ||.+++..
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~ 156 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPE---NGEIHFKT 156 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCT---TCEEEEEE
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCC---CcEEEEEe
Confidence 4332211 113789999999999 88888754
No 121
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.56 E-value=3.4e-14 Score=100.91 Aligned_cols=98 Identities=17% Similarity=0.238 Sum_probs=76.6
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCcc-c--C--CCccEEEeccc
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQ-F--I--PPSDAFFFKTV 82 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~-~--~--~~~D~v~~~~~ 82 (180)
+..+|||||||+|.++..+++.+|+.+++++|+++ ++..+++ ..+++++++|+.+ . . ..+|.|+++..
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 56789999999999999999999999999999966 8887764 3589999999865 1 2 36999987654
Q ss_pred cccCChH------HHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 83 FHFFDDE------DCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 83 l~~~~~~------~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
..+.... ....+++++.++|+| ||.+++..
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~Lkp---gG~l~~~t 153 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGK---GGSIHFKT 153 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTT---SCEEEEEE
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCC---CCEEEEEe
Confidence 3222211 023789999999999 88888864
No 122
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.56 E-value=3.6e-15 Score=105.53 Aligned_cols=102 Identities=13% Similarity=0.134 Sum_probs=82.6
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----CCCeeEEecCCcc-cC--CCccEEEeccccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----TDNLKYIEGDMFQ-FI--PPSDAFFFKTVFH 84 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----~~~~~~~~~d~~~-~~--~~~D~v~~~~~l~ 84 (180)
++++.+|||+|||+|.++..+++..+. +++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|++..+++
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLD 118 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHH
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchh
Confidence 467889999999999999999988543 799999966 8777764 3689999999865 32 3699999999888
Q ss_pred cCC-------------hHHHHHHHHHHHHhhccCCCCcEEEEEEeee
Q 030291 85 FFD-------------DEDCLKLLKKCREAIASNGERGKVLIIDIVI 118 (180)
Q Consensus 85 ~~~-------------~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~ 118 (180)
++. ......+++++.++|+| ||.+++.++..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~li~~~~~~ 162 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVP---GGRFISMTSAA 162 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEE---EEEEEEEESCC
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcC---CCEEEEEeCCC
Confidence 765 23445889999999999 89998887543
No 123
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.56 E-value=2.5e-14 Score=106.84 Aligned_cols=129 Identities=14% Similarity=0.108 Sum_probs=92.7
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----------CCCeeEEecCCccc-----CCCccEE
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----------TDNLKYIEGDMFQF-----IPPSDAF 77 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----------~~~~~~~~~d~~~~-----~~~~D~v 77 (180)
+++.+|||||||+|.++..+++..+..+++++|+++ +++.+++ ..++++..+|..+. ...||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 567899999999999999999877778999999965 7776653 36899999998652 2369999
Q ss_pred EeccccccCChHHH--HHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHH
Q 030291 78 FFKTVFHFFDDEDC--LKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSL 155 (180)
Q Consensus 78 ~~~~~l~~~~~~~~--~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (180)
++....++.+.... .+++++++++|+| ||.+++.... ... .....+++.+.
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~~~~---~~~---------------------~~~~~~~~~~~ 226 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKP---DGICCNQGES---IWL---------------------DLELIEKMSRF 226 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEE---EEEEEEEECC---TTT---------------------CHHHHHHHHHH
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCC---CcEEEEecCC---ccc---------------------chHHHHHHHHH
Confidence 99766555443322 4889999999999 7777775311 100 11245778899
Q ss_pred HHHcCCeEEEEeec
Q 030291 156 FVNAGFTHYKIAPI 169 (180)
Q Consensus 156 l~~aGf~~~~~~~~ 169 (180)
++++||..++....
T Consensus 227 l~~~GF~~v~~~~~ 240 (304)
T 3bwc_A 227 IRETGFASVQYALM 240 (304)
T ss_dssp HHHHTCSEEEEEEC
T ss_pred HHhCCCCcEEEEEe
Confidence 99999998877643
No 124
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.56 E-value=1.5e-14 Score=100.39 Aligned_cols=100 Identities=17% Similarity=0.232 Sum_probs=75.1
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCcc---cC-CCccEEEecc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQ---FI-PPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~---~~-~~~D~v~~~~ 81 (180)
++++.+|||+|||+|.++..+++. +.+++++|+++ +++.+++ ..++++.+.+... .. ..||+|+++.
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~ 97 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNL 97 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeC
Confidence 467889999999999999999888 77899999966 8888875 2689999977644 12 2599998863
Q ss_pred -ccccC------ChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 82 -VFHFF------DDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 82 -~l~~~------~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
.+++. .......+++++.++|+| ||.+++..+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~ 137 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEV---GGRLAIMIYY 137 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEE---EEEEEEEEC-
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCC---CcEEEEEEeC
Confidence 22210 123445789999999999 8888887643
No 125
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.55 E-value=4.2e-15 Score=113.80 Aligned_cols=112 Identities=12% Similarity=0.138 Sum_probs=86.8
Q ss_pred ccccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC---------------CCCeeEEecC
Q 030291 3 TLLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ---------------TDNLKYIEGD 66 (180)
Q Consensus 3 ~~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~---------------~~~~~~~~~d 66 (180)
..+++.+. +.++.+|||||||+|.++..++...+..+++|+|+++ +++.|++ ..+++++++|
T Consensus 163 ~~il~~l~--l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD 240 (438)
T 3uwp_A 163 AQMIDEIK--MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGD 240 (438)
T ss_dssp HHHHHHHC--CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECC
T ss_pred HHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECc
Confidence 34556666 7889999999999999999999887555699999965 6555542 2689999999
Q ss_pred Ccc-cC----CCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCC
Q 030291 67 MFQ-FI----PPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKE 122 (180)
Q Consensus 67 ~~~-~~----~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~ 122 (180)
+.+ +. ..+|+|+++..++ .++.. +.|.++.+.||| ||.+++.+...+...
T Consensus 241 ~~~lp~~d~~~~aDVVf~Nn~~F-~pdl~--~aL~Ei~RvLKP---GGrIVssE~f~p~d~ 295 (438)
T 3uwp_A 241 FLSEEWRERIANTSVIFVNNFAF-GPEVD--HQLKERFANMKE---GGRIVSSKPFAPLNF 295 (438)
T ss_dssp TTSHHHHHHHHTCSEEEECCTTC-CHHHH--HHHHHHHTTSCT---TCEEEESSCSSCTTC
T ss_pred ccCCccccccCCccEEEEccccc-CchHH--HHHHHHHHcCCC---CcEEEEeecccCCCC
Confidence 976 22 3699999987653 33444 678999999999 999999887766543
No 126
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.55 E-value=1.4e-14 Score=106.74 Aligned_cols=100 Identities=17% Similarity=0.173 Sum_probs=78.9
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHH-CCCCeEEEeeCch-hhccCCC----C---CCeeEEecCCcccCC--C
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEA-FPGIKCTVLDLPH-AVTDMPQ----T---DNLKYIEGDMFQFIP--P 73 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~-~~~~~~~~~D~~~-~~~~a~~----~---~~~~~~~~d~~~~~~--~ 73 (180)
+++.+. +.++.+|||+|||+|.++..+++. .|..+++++|+++ +++.+++ . .++++.++|+.+..+ .
T Consensus 102 ~~~~~~--~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~ 179 (275)
T 1yb2_A 102 IIMRCG--LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQM 179 (275)
T ss_dssp ----CC--CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCC
T ss_pred HHHHcC--CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCC
Confidence 444455 677889999999999999999987 7788999999965 7776653 2 579999999976443 5
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 74 SDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 74 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
||+|++ +++++. .+++++.++|+| ||.+++...
T Consensus 180 fD~Vi~-----~~~~~~--~~l~~~~~~Lkp---gG~l~i~~~ 212 (275)
T 1yb2_A 180 YDAVIA-----DIPDPW--NHVQKIASMMKP---GSVATFYLP 212 (275)
T ss_dssp EEEEEE-----CCSCGG--GSHHHHHHTEEE---EEEEEEEES
T ss_pred ccEEEE-----cCcCHH--HHHHHHHHHcCC---CCEEEEEeC
Confidence 999998 456666 779999999999 888888763
No 127
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.53 E-value=8.1e-14 Score=99.27 Aligned_cols=130 Identities=8% Similarity=0.024 Sum_probs=99.0
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcccCC---CccEEEecc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQFIP---PSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~~~---~~D~v~~~~ 81 (180)
.+++.+|+|||||+|.++..+++..|..+++++|+++ +++.|++ ..++++..+|.++..+ .||+|+..+
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG 92 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAG 92 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcC
Confidence 4577899999999999999999998888999999965 8888874 3579999999987554 599998765
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCC
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGF 161 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 161 (180)
+- ......++....+.|++ +|.+++... ...+.+.+.+.+.||
T Consensus 93 ~G----g~~i~~Il~~~~~~L~~---~~~lVlq~~------------------------------~~~~~vr~~L~~~Gf 135 (225)
T 3kr9_A 93 MG----GRLIARILEEGLGKLAN---VERLILQPN------------------------------NREDDLRIWLQDHGF 135 (225)
T ss_dssp EC----HHHHHHHHHHTGGGCTT---CCEEEEEES------------------------------SCHHHHHHHHHHTTE
T ss_pred CC----hHHHHHHHHHHHHHhCC---CCEEEEECC------------------------------CCHHHHHHHHHHCCC
Confidence 52 33355889999999999 788777321 134677888999999
Q ss_pred eEEEEee---cCCceeEEEEe
Q 030291 162 THYKIAP---IFGIKSLIEVY 179 (180)
Q Consensus 162 ~~~~~~~---~~~~~~~~~~~ 179 (180)
.+++..- .+-++.++.+.
T Consensus 136 ~i~~e~lv~e~~~~Yeii~~~ 156 (225)
T 3kr9_A 136 QIVAESILEEAGKFYEILVVE 156 (225)
T ss_dssp EEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEEEECCEEEEEEEEE
Confidence 9887642 23345555543
No 128
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.53 E-value=3.6e-14 Score=99.31 Aligned_cols=103 Identities=17% Similarity=0.231 Sum_probs=79.1
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHC-CCCeEEEeeCch-hhccCCC-------CCCeeEEecCCccc---C-CCccEEEe
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAF-PGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQF---I-PPSDAFFF 79 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~---~-~~~D~v~~ 79 (180)
++++.+|||+|||+|.++..+++.. +..+++++|+++ +++.+++ ..++++.++|+.+. . ..||+|++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 5678899999999999999999885 567999999965 8888865 25899999998542 2 36999998
Q ss_pred cccccc-------CChHHHHHHHHHHHHhhccCCCCcEEEEEEeee
Q 030291 80 KTVFHF-------FDDEDCLKLLKKCREAIASNGERGKVLIIDIVI 118 (180)
Q Consensus 80 ~~~l~~-------~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~ 118 (180)
+..+.. .......++++++.++|+| ||.+++..+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~---gG~l~~~~~~~ 142 (197)
T 3eey_A 100 NLGYLPSGDHSISTRPETTIQALSKAMELLVT---GGIITVVIYYG 142 (197)
T ss_dssp EESBCTTSCTTCBCCHHHHHHHHHHHHHHEEE---EEEEEEEECCB
T ss_pred cCCcccCcccccccCcccHHHHHHHHHHhCcC---CCEEEEEEccC
Confidence 765411 1122334789999999999 88888876543
No 129
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.52 E-value=3.4e-14 Score=108.95 Aligned_cols=106 Identities=17% Similarity=0.294 Sum_probs=83.3
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC---------CCCeeEEecCCcccCC--
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ---------TDNLKYIEGDMFQFIP-- 72 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~---------~~~~~~~~~d~~~~~~-- 72 (180)
+++.++ ...+.+|||+|||+|.++..+++.+|+.+++++|+++ +++.+++ ..++++..+|..+..+
T Consensus 214 ll~~l~--~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~ 291 (375)
T 4dcm_A 214 FMQHLP--ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 291 (375)
T ss_dssp HHHTCC--CSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTT
T ss_pred HHHhCc--ccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCC
Confidence 344454 4455899999999999999999999999999999976 8888875 1258889999977544
Q ss_pred CccEEEecccccc---CChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 73 PSDAFFFKTVFHF---FDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 73 ~~D~v~~~~~l~~---~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
.||+|+++-.+|+ +.+....++++++.++|+| ||.++++.
T Consensus 292 ~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~iv~ 334 (375)
T 4dcm_A 292 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKI---NGELYIVA 334 (375)
T ss_dssp CEEEEEECCCC-------CCHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred CeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCC---CcEEEEEE
Confidence 6999999988875 3334444789999999999 88888865
No 130
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.52 E-value=2.8e-14 Score=103.68 Aligned_cols=121 Identities=12% Similarity=0.059 Sum_probs=91.9
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCcccC------CCccEEEec
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQFI------PPSDAFFFK 80 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~~------~~~D~v~~~ 80 (180)
.++.+|||||||+|..+..++..+|+.+++++|+++ +++.+++ ..+++++++|+.+.. ..||+|++.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 567899999999999999999999999999999966 8887764 357999999985521 469999997
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcC
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAG 160 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 160 (180)
.+- +.. .+++.+.++|+| ||.+++.... ... -..+++...++..|
T Consensus 159 a~~----~~~--~ll~~~~~~Lkp---gG~l~~~~g~----~~~----------------------~e~~~~~~~l~~~G 203 (249)
T 3g89_A 159 AVA----PLC--VLSELLLPFLEV---GGAAVAMKGP----RVE----------------------EELAPLPPALERLG 203 (249)
T ss_dssp SSC----CHH--HHHHHHGGGEEE---EEEEEEEECS----CCH----------------------HHHTTHHHHHHHHT
T ss_pred CcC----CHH--HHHHHHHHHcCC---CeEEEEEeCC----CcH----------------------HHHHHHHHHHHHcC
Confidence 542 333 789999999999 8888774411 000 01245667788889
Q ss_pred CeEEEEeec
Q 030291 161 FTHYKIAPI 169 (180)
Q Consensus 161 f~~~~~~~~ 169 (180)
|++.++...
T Consensus 204 ~~~~~~~~~ 212 (249)
T 3g89_A 204 GRLGEVLAL 212 (249)
T ss_dssp EEEEEEEEE
T ss_pred CeEEEEEEe
Confidence 988777644
No 131
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.52 E-value=3.6e-14 Score=103.26 Aligned_cols=98 Identities=13% Similarity=0.188 Sum_probs=79.6
Q ss_pred cccccccccCCCeEEEeCCcccHHHHHHHHH-CCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcccCC--Cc
Q 030291 6 VKDCRPIFQGLRSMVDVGGGTGAFARIISEA-FPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQFIP--PS 74 (180)
Q Consensus 6 ~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~-~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~~~--~~ 74 (180)
+..+. ..++.+|||+|||+|.++..+++. .|..+++++|+++ +++.+++ ..++++.++|+.+..+ .|
T Consensus 86 ~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 163 (255)
T 3mb5_A 86 VAYAG--ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEENV 163 (255)
T ss_dssp HHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCSE
T ss_pred HHhhC--CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCCc
Confidence 34444 677889999999999999999998 7889999999965 8888764 2459999999976543 59
Q ss_pred cEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 75 DAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 75 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
|+|++ +.+++. .+++++.++|+| ||.+++..
T Consensus 164 D~v~~-----~~~~~~--~~l~~~~~~L~~---gG~l~~~~ 194 (255)
T 3mb5_A 164 DHVIL-----DLPQPE--RVVEHAAKALKP---GGFFVAYT 194 (255)
T ss_dssp EEEEE-----CSSCGG--GGHHHHHHHEEE---EEEEEEEE
T ss_pred CEEEE-----CCCCHH--HHHHHHHHHcCC---CCEEEEEE
Confidence 99998 345555 679999999999 88888764
No 132
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.51 E-value=6.8e-14 Score=103.26 Aligned_cols=138 Identities=12% Similarity=0.077 Sum_probs=90.0
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccC-CCCCCeeEE-ecCCcc----cCC--CccEEEecccccc
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDM-PQTDNLKYI-EGDMFQ----FIP--PSDAFFFKTVFHF 85 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a-~~~~~~~~~-~~d~~~----~~~--~~D~v~~~~~l~~ 85 (180)
.+.+|||||||+|.++..+++.. ..+++++|++. |++.+ ++..++... ..++.. .++ .||+|++..++++
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~g-a~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~s 163 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNG-AKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFIS 163 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSC
T ss_pred cccEEEecCCCccHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHhh
Confidence 46799999999999999988873 45899999966 88874 334454332 233311 122 4999999888775
Q ss_pred CChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEee-cCCcccCHHHHHHHHHHcCCeEE
Q 030291 86 FDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFN-VGGKERTEQEWGSLFVNAGFTHY 164 (180)
Q Consensus 86 ~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~aGf~~~ 164 (180)
+ . .+|.++.++|+| ||.+++......+. . ....+...... ...+.+..+++.+.++++||++.
T Consensus 164 l---~--~vL~e~~rvLkp---GG~lv~lvkPqfe~-~-------~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~ 227 (291)
T 3hp7_A 164 L---N--LILPALAKILVD---GGQVVALVKPQFEA-G-------REQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVK 227 (291)
T ss_dssp G---G--GTHHHHHHHSCT---TCEEEEEECGGGTS-C-------GGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred H---H--HHHHHHHHHcCc---CCEEEEEECccccc-C-------hhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEE
Confidence 5 3 679999999999 99998863111110 0 00111101000 01133467889999999999987
Q ss_pred EEeec
Q 030291 165 KIAPI 169 (180)
Q Consensus 165 ~~~~~ 169 (180)
.+...
T Consensus 228 ~~~~s 232 (291)
T 3hp7_A 228 GLDFS 232 (291)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 76543
No 133
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.51 E-value=3.6e-14 Score=101.15 Aligned_cols=98 Identities=11% Similarity=0.102 Sum_probs=76.8
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCccc----C--CCccEEEecc
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQF----I--PPSDAFFFKT 81 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~----~--~~~D~v~~~~ 81 (180)
...+|||||||+|.++..+++.+|+..++++|++. +++.+++ ..+++++++|+.+. . .++|.|++.+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 56799999999999999999999999999999966 8887764 46899999998552 2 3699999875
Q ss_pred ccccCChHHH------HHHHHHHHHhhccCCCCcEEEEEE
Q 030291 82 VFHFFDDEDC------LKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 82 ~l~~~~~~~~------~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
...+...... ..+++++.++|+| ||.+++..
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~Lkp---GG~l~i~t 150 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQL---GGVFHMAT 150 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEE---EEEEEEEE
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCC---CcEEEEEe
Confidence 4433222211 2589999999999 88877764
No 134
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.51 E-value=2e-13 Score=97.43 Aligned_cols=130 Identities=7% Similarity=-0.032 Sum_probs=99.1
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcccCC---CccEEEecc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQFIP---PSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~~~---~~D~v~~~~ 81 (180)
.+++.+|+|||||+|.++..+++..+..+++++|+++ +++.|++ ..++++.++|.++... .||+|+..+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaG 98 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICG 98 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeC
Confidence 4677899999999999999999998778899999966 8888874 3579999999987443 599988765
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCC
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGF 161 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 161 (180)
+. ......+|....+.|++ +|.+++... ...+.+++.+.+.||
T Consensus 99 mG----g~lI~~IL~~~~~~l~~---~~~lIlqp~------------------------------~~~~~lr~~L~~~Gf 141 (230)
T 3lec_A 99 MG----GRLIADILNNDIDKLQH---VKTLVLQPN------------------------------NREDDLRKWLAANDF 141 (230)
T ss_dssp EC----HHHHHHHHHHTGGGGTT---CCEEEEEES------------------------------SCHHHHHHHHHHTTE
T ss_pred Cc----hHHHHHHHHHHHHHhCc---CCEEEEECC------------------------------CChHHHHHHHHHCCC
Confidence 53 34455889999999998 787777431 134778889999999
Q ss_pred eEEEEee---cCCceeEEEEe
Q 030291 162 THYKIAP---IFGIKSLIEVY 179 (180)
Q Consensus 162 ~~~~~~~---~~~~~~~~~~~ 179 (180)
.+++..- .+-++.++.+.
T Consensus 142 ~i~~E~lv~e~~~~Yeii~~~ 162 (230)
T 3lec_A 142 EIVAEDILTENDKRYEILVVK 162 (230)
T ss_dssp EEEEEEEEEC--CEEEEEEEE
T ss_pred EEEEEEEEEECCEEEEEEEEE
Confidence 9887653 23355555553
No 135
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.51 E-value=1.2e-13 Score=100.88 Aligned_cols=123 Identities=11% Similarity=0.104 Sum_probs=89.5
Q ss_pred cc-CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCccc-----CCCccEEE
Q 030291 13 FQ-GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQF-----IPPSDAFF 78 (180)
Q Consensus 13 ~~-~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~-----~~~~D~v~ 78 (180)
.+ ++.+|||+|||+|.++..+++..+. +++++|+++ +++.+++ ..++++.++|+.+. ...||+|+
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEE
Confidence 45 6889999999999999999988654 899999965 8887764 34799999999662 23699999
Q ss_pred eccccccC------------------ChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEe
Q 030291 79 FKTVFHFF------------------DDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNF 140 (180)
Q Consensus 79 ~~~~l~~~------------------~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (180)
++-.+... .......+++.+.++|+| ||.+++...
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~------------------------ 177 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQ---GGKANFVHR------------------------ 177 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHHHHHHEEE---EEEEEEEEC------------------------
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccC---CcEEEEEEc------------------------
Confidence 97544322 112344789999999999 888887421
Q ss_pred ecCCcccCHHHHHHHHHHcCCeEEEEee
Q 030291 141 NVGGKERTEQEWGSLFVNAGFTHYKIAP 168 (180)
Q Consensus 141 ~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 168 (180)
.....++...+++.||....+..
T Consensus 178 -----~~~~~~~~~~l~~~~~~~~~~~~ 200 (259)
T 3lpm_A 178 -----PERLLDIIDIMRKYRLEPKRIQF 200 (259)
T ss_dssp -----TTTHHHHHHHHHHTTEEEEEEEE
T ss_pred -----HHHHHHHHHHHHHCCCceEEEEE
Confidence 11335666777778887766543
No 136
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.50 E-value=4.8e-14 Score=97.09 Aligned_cols=109 Identities=11% Similarity=0.064 Sum_probs=84.1
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC--CCCeeEEecCCcc-cC---C--CccEEEecccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ--TDNLKYIEGDMFQ-FI---P--PSDAFFFKTVF 83 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~--~~~~~~~~~d~~~-~~---~--~~D~v~~~~~l 83 (180)
++++.+|||||||. +.+|+++ |++.+++ ..++++.++|+.+ +. + .||+|+++.++
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l 73 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVP 73 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCST
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChh
Confidence 78899999999986 1288865 8888875 3468999999855 22 2 59999999999
Q ss_pred ccC-ChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCC
Q 030291 84 HFF-DDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGF 161 (180)
Q Consensus 84 ~~~-~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 161 (180)
||+ ++.. +++++++++||| ||.+++.+....... .....++.++|.+.++++||
T Consensus 74 ~~~~~~~~--~~l~~~~r~Lkp---gG~l~~~~~~~~~~~-------------------~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 74 GSTTLHSA--EILAEIARILRP---GGCLFLKEPVETAVD-------------------NNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp TCCCCCCH--HHHHHHHHHEEE---EEEEEEEEEEESSSC-------------------SSSSSCCHHHHHHHHHHTTC
T ss_pred hhcccCHH--HHHHHHHHHCCC---CEEEEEEcccccccc-------------------cccccCCHHHHHHHHHHCCC
Confidence 999 7776 789999999999 899888654322110 01123578999999999999
No 137
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.50 E-value=4.3e-15 Score=108.17 Aligned_cols=144 Identities=13% Similarity=0.104 Sum_probs=91.8
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcc----cC-----CCccEE
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQ----FI-----PPSDAF 77 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~----~~-----~~~D~v 77 (180)
++.+|||+|||+|.++..+++..++.+++++|+++ +++.+++ ..++++.++|+.+ .. ..||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 56799999999999999998887778999999965 8888764 2459999998532 22 259999
Q ss_pred EeccccccCCh-------------HHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCC
Q 030291 78 FFKTVFHFFDD-------------EDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGG 144 (180)
Q Consensus 78 ~~~~~l~~~~~-------------~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (180)
+++-.+++... .....++.++.++|+| ||.+.+.+..... .......... .. ...+
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Lkp---gG~l~~~~~~~~~------~~~~l~~~g~-~~-~~~~ 213 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAE---GGELEFVKRIIHD------SLQLKKRLRW-YS-CMLG 213 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHH---HTHHHHHHHHHHH------HHHHGGGBSC-EE-EEES
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEec---CCEEEEEHHHHHH------HHhcccceEE-EE-ECCC
Confidence 99865544330 0112467888999999 8988776432111 0000001111 11 1112
Q ss_pred cccCHHHHHHHHHHcCCeEEEEeec
Q 030291 145 KERTEQEWGSLFVNAGFTHYKIAPI 169 (180)
Q Consensus 145 ~~~~~~~~~~~l~~aGf~~~~~~~~ 169 (180)
...+.+++.++++++||+.+++...
T Consensus 214 ~~~~~~~~~~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 214 KKCSLAPLKEELRIQGVPKVTYTEF 238 (254)
T ss_dssp STTSHHHHHHHHHHTTCSEEEEEEE
T ss_pred ChhHHHHHHHHHHHcCCCceEEEEE
Confidence 3345578999999999998876654
No 138
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.50 E-value=5.6e-14 Score=96.85 Aligned_cols=119 Identities=16% Similarity=0.214 Sum_probs=90.7
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCcccCC--Ccc
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQFIP--PSD 75 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~~~--~~D 75 (180)
+++.+. ..++.+|||+|||+|.++..+++ +..+++++|+++ +++.+++ ..++++.++|+.+..+ .||
T Consensus 27 ~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D 102 (183)
T 2yxd_A 27 SIGKLN--LNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDKLEFN 102 (183)
T ss_dssp HHHHHC--CCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGGCCCS
T ss_pred HHHHcC--CCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccCCCCc
Confidence 334444 56778999999999999999988 588999999965 8887765 2579999999866433 699
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHH
Q 030291 76 AFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSL 155 (180)
Q Consensus 76 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (180)
+|++..+ .+.. .+++++.++ | ||.+++..... .+..++.+.
T Consensus 103 ~i~~~~~----~~~~--~~l~~~~~~--~---gG~l~~~~~~~----------------------------~~~~~~~~~ 143 (183)
T 2yxd_A 103 KAFIGGT----KNIE--KIIEILDKK--K---INHIVANTIVL----------------------------ENAAKIINE 143 (183)
T ss_dssp EEEECSC----SCHH--HHHHHHHHT--T---CCEEEEEESCH----------------------------HHHHHHHHH
T ss_pred EEEECCc----ccHH--HHHHHHhhC--C---CCEEEEEeccc----------------------------ccHHHHHHH
Confidence 9999887 3333 779999988 8 89988866321 123567788
Q ss_pred HHHcCCeEEEE
Q 030291 156 FVNAGFTHYKI 166 (180)
Q Consensus 156 l~~aGf~~~~~ 166 (180)
+++.||.+..+
T Consensus 144 l~~~g~~~~~~ 154 (183)
T 2yxd_A 144 FESRGYNVDAV 154 (183)
T ss_dssp HHHTTCEEEEE
T ss_pred HHHcCCeEEEE
Confidence 99999876544
No 139
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.50 E-value=1.1e-13 Score=97.59 Aligned_cols=91 Identities=21% Similarity=0.329 Sum_probs=74.4
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCcccC--CCccEEEecccccc
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQFI--PPSDAFFFKTVFHF 85 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~~--~~~D~v~~~~~l~~ 85 (180)
++.+|||+|||+|..+..+++.+|+.+++++|+++ +++.+++ ..++++.++|+.+.. ..||+|+++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~--- 141 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAF--- 141 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSCS---
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEecc---
Confidence 36799999999999999999998889999999965 8777764 245999999996633 36999998653
Q ss_pred CChHHHHHHHHHHHHhhccCCCCcEEEEE
Q 030291 86 FDDEDCLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 86 ~~~~~~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
.+.. .+++++.++|+| ||.+++.
T Consensus 142 -~~~~--~~l~~~~~~L~~---gG~l~~~ 164 (207)
T 1jsx_A 142 -ASLN--DMVSWCHHLPGE---QGRFYAL 164 (207)
T ss_dssp -SSHH--HHHHHHTTSEEE---EEEEEEE
T ss_pred -CCHH--HHHHHHHHhcCC---CcEEEEE
Confidence 3334 789999999999 7887775
No 140
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.50 E-value=1.8e-14 Score=109.30 Aligned_cols=100 Identities=19% Similarity=0.248 Sum_probs=81.3
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCcccC-CCccEEEeccccccC
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQFI-PPSDAFFFKTVFHFF 86 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~~~-~~~D~v~~~~~l~~~ 86 (180)
..+.+|||+|||+|.++..+++..|..+++++|+++ +++.+++ ..+.++..+|..+.. +.||+|+++..+|+.
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~fD~Iv~~~~~~~g 274 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFDMIISNPPFHDG 274 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCEEEEEECCCCCSS
T ss_pred CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCeeEEEECCCcccC
Confidence 456799999999999999999998888999999976 8887764 234677888886533 469999999998863
Q ss_pred ---ChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 87 ---DDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 87 ---~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
......++++++.++|+| ||.+++...
T Consensus 275 ~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~ 304 (343)
T 2pjd_A 275 MQTSLDAAQTLIRGAVRHLNS---GGELRIVAN 304 (343)
T ss_dssp SHHHHHHHHHHHHHHGGGEEE---EEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhCCC---CcEEEEEEc
Confidence 233455899999999999 888888764
No 141
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.49 E-value=3.8e-14 Score=103.51 Aligned_cols=148 Identities=15% Similarity=0.194 Sum_probs=96.8
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcc-cC--CCccEEEeccccccC-Ch
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQ-FI--PPSDAFFFKTVFHFF-DD 88 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~-~~--~~~D~v~~~~~l~~~-~~ 88 (180)
+++.+|||||||+|.++..+++. +.+++++|+++ +++.+++...-.+.++|+.+ +. ..||+|++..+++|+ ++
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~ 130 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN 130 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSC
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhcccc
Confidence 46789999999999999999887 66899999966 88887752111378888854 22 369999998866665 56
Q ss_pred HHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCc----hhhhhhhhcc--ceeeE----eecCCcccCHHHHHHHHHH
Q 030291 89 EDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDD----RELTESKLLF--DIFMN----FNVGGKERTEQEWGSLFVN 158 (180)
Q Consensus 89 ~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~l~~ 158 (180)
.. .+++++.++|+| ||.+++........... ..+....... ..... .......++.+++.++
T Consensus 131 ~~--~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--- 202 (260)
T 2avn_A 131 KD--KAFSEIRRVLVP---DGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSYAFKPEDLDSL--- 202 (260)
T ss_dssp HH--HHHHHHHHHEEE---EEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEECBCGGGGSSC---
T ss_pred HH--HHHHHHHHHcCC---CeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEeccCHHHHHHh---
Confidence 54 889999999999 88888877653211000 0000000000 00000 0001125688888777
Q ss_pred cCCeEEEEeecCC
Q 030291 159 AGFTHYKIAPIFG 171 (180)
Q Consensus 159 aGf~~~~~~~~~~ 171 (180)
+||+++++....+
T Consensus 203 aGf~~~~~~~~~~ 215 (260)
T 2avn_A 203 EGFETVDIRGIGV 215 (260)
T ss_dssp TTEEEEEEEEECS
T ss_pred cCceEEEEECCCC
Confidence 9999988876543
No 142
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.49 E-value=5.2e-13 Score=98.53 Aligned_cols=121 Identities=12% Similarity=0.093 Sum_probs=92.1
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcccC--CCccEEEeccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQFI--PPSDAFFFKTV 82 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~~--~~~D~v~~~~~ 82 (180)
.+++.+|||+|||+|.++..+++..+. +++++|+++ +++.+++ ..++++.++|+.+.. ..||+|++...
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p 201 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCc
Confidence 356889999999999999999998654 799999965 8888764 345899999997633 36999998544
Q ss_pred cccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCe
Q 030291 83 FHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFT 162 (180)
Q Consensus 83 l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 162 (180)
. ... .+++++.++|+| ||.+++.+....... .....+++.+.++++||+
T Consensus 202 ~----~~~--~~l~~~~~~Lkp---gG~l~~~~~~~~~~~----------------------~~~~~~~i~~~~~~~G~~ 250 (278)
T 2frn_A 202 V----RTH--EFIPKALSIAKD---GAIIHYHNTVPEKLM----------------------PREPFETFKRITKEYGYD 250 (278)
T ss_dssp S----SGG--GGHHHHHHHEEE---EEEEEEEEEEEGGGT----------------------TTTTHHHHHHHHHHTTCE
T ss_pred h----hHH--HHHHHHHHHCCC---CeEEEEEEeeccccc----------------------cccHHHHHHHHHHHcCCe
Confidence 2 223 679999999999 888888776432110 112457788999999998
Q ss_pred EEE
Q 030291 163 HYK 165 (180)
Q Consensus 163 ~~~ 165 (180)
...
T Consensus 251 ~~~ 253 (278)
T 2frn_A 251 VEK 253 (278)
T ss_dssp EEE
T ss_pred eEE
Confidence 766
No 143
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.49 E-value=5.6e-14 Score=97.52 Aligned_cols=118 Identities=19% Similarity=0.255 Sum_probs=90.6
Q ss_pred cccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcccC---CCc
Q 030291 6 VKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQFI---PPS 74 (180)
Q Consensus 6 ~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~~---~~~ 74 (180)
++.+. ..++.+|||+|||+|.++..+++.. .+++++|+++ +++.+++ ..++++.++|+.+.. +.|
T Consensus 26 ~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 101 (192)
T 1l3i_A 26 MCLAE--PGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDI 101 (192)
T ss_dssp HHHHC--CCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCE
T ss_pred HHhcC--CCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCC
Confidence 34444 5678899999999999999998886 7899999965 7777764 268999999986522 469
Q ss_pred cEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHH
Q 030291 75 DAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGS 154 (180)
Q Consensus 75 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (180)
|+|++...++++ ..+++++.++|+| ||.+++..... .+..++.+
T Consensus 102 D~v~~~~~~~~~-----~~~l~~~~~~l~~---gG~l~~~~~~~----------------------------~~~~~~~~ 145 (192)
T 1l3i_A 102 DIAVVGGSGGEL-----QEILRIIKDKLKP---GGRIIVTAILL----------------------------ETKFEAME 145 (192)
T ss_dssp EEEEESCCTTCH-----HHHHHHHHHTEEE---EEEEEEEECBH----------------------------HHHHHHHH
T ss_pred CEEEECCchHHH-----HHHHHHHHHhcCC---CcEEEEEecCc----------------------------chHHHHHH
Confidence 999998877543 3789999999999 88888765321 12356778
Q ss_pred HHHHcCCeE
Q 030291 155 LFVNAGFTH 163 (180)
Q Consensus 155 ~l~~aGf~~ 163 (180)
.+++.||.+
T Consensus 146 ~l~~~g~~~ 154 (192)
T 1l3i_A 146 CLRDLGFDV 154 (192)
T ss_dssp HHHHTTCCC
T ss_pred HHHHCCCce
Confidence 888999843
No 144
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.49 E-value=3.8e-13 Score=92.04 Aligned_cols=97 Identities=14% Similarity=0.224 Sum_probs=77.9
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHH-CCCCeEEEeeCchhhccCCCCCCeeEEecCCccc---------CC--CccEEEec
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEA-FPGIKCTVLDLPHAVTDMPQTDNLKYIEGDMFQF---------IP--PSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~-~~~~~~~~~D~~~~~~~a~~~~~~~~~~~d~~~~---------~~--~~D~v~~~ 80 (180)
.+++.+|||+|||+|.++..+++. .++.+++++|+++++. ..++++.++|+.+. .+ .||+|+++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~ 95 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDP----IVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSD 95 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCC----CTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccc----cCcEEEEEcccccchhhhhhhccCCCCceeEEEEC
Confidence 456789999999999999999988 4678999999966432 26799999999653 33 69999999
Q ss_pred cccccCChHH---------HHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 81 TVFHFFDDED---------CLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 81 ~~l~~~~~~~---------~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
..+++..+.. ...+++++.++|+| ||.+++...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~---gG~l~~~~~ 137 (180)
T 1ej0_A 96 MAPNMSGTPAVDIPRAMYLVELALEMCRDVLAP---GGSFVVKVF 137 (180)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEEE
T ss_pred CCccccCCCccchHHHHHHHHHHHHHHHHHcCC---CcEEEEEEe
Confidence 9888776541 13789999999999 888887664
No 145
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.48 E-value=6.1e-14 Score=99.14 Aligned_cols=97 Identities=12% Similarity=0.109 Sum_probs=78.7
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCcccC---CCc
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQFI---PPS 74 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~~---~~~ 74 (180)
+++.+. ..++.+|||||||+|.++..+++. ..+++++|+++ +++.+++ ..++++..+|..+.. ..|
T Consensus 69 ~~~~l~--~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 144 (210)
T 3lbf_A 69 MTELLE--LTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPF 144 (210)
T ss_dssp HHHHTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCE
T ss_pred HHHhcC--CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCc
Confidence 334444 577899999999999999999998 67899999965 8887764 357999999996632 369
Q ss_pred cEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 75 DAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 75 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
|+|++..+++++++ .+.+.|+| ||.+++...
T Consensus 145 D~i~~~~~~~~~~~--------~~~~~L~p---gG~lv~~~~ 175 (210)
T 3lbf_A 145 DAIIVTAAPPEIPT--------ALMTQLDE---GGILVLPVG 175 (210)
T ss_dssp EEEEESSBCSSCCT--------HHHHTEEE---EEEEEEEEC
T ss_pred cEEEEccchhhhhH--------HHHHhccc---CcEEEEEEc
Confidence 99999999999886 47889999 888888654
No 146
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.48 E-value=6e-13 Score=93.33 Aligned_cols=96 Identities=16% Similarity=0.177 Sum_probs=74.3
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCC--CCeEEEeeCchhhccCCCCCCeeEEecCCcccC-------------------
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFP--GIKCTVLDLPHAVTDMPQTDNLKYIEGDMFQFI------------------- 71 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~--~~~~~~~D~~~~~~~a~~~~~~~~~~~d~~~~~------------------- 71 (180)
++++.+|||+|||+|.++..+++.++ ..+++++|++++. ...++++.++|+.+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~ 95 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----PIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVD 95 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----CCTTCEEEECCTTTTSSCCC-----------CHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----CCCCceEEEccccchhhhhhccccccccccchhhH
Confidence 46778999999999999999999987 6899999997742 2356888898885532
Q ss_pred -------C--CccEEEeccccccCC----hHH-----HHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 72 -------P--PSDAFFFKTVFHFFD----DED-----CLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 72 -------~--~~D~v~~~~~l~~~~----~~~-----~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
+ .||+|++...+++.. +.. ...+++++.++|+| ||.+++..
T Consensus 96 ~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkp---gG~lv~~~ 154 (201)
T 2plw_A 96 YKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINI---GGTYIVKM 154 (201)
T ss_dssp HHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred HHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccC---CCEEEEEE
Confidence 2 699999988877642 221 12478999999999 88877744
No 147
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.48 E-value=6.6e-14 Score=101.84 Aligned_cols=99 Identities=12% Similarity=0.137 Sum_probs=79.9
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHH-CCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCccc-CC--
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEA-FPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQF-IP-- 72 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~-~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~-~~-- 72 (180)
+++.+. +.++.+|||+|||+|.++..+++. .|..+++++|+++ +++.+++ ..++++.++|+.+. .+
T Consensus 88 ~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~ 165 (258)
T 2pwy_A 88 MVTLLD--LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEA 165 (258)
T ss_dssp HHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTT
T ss_pred HHHHcC--CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCC
Confidence 344455 678889999999999999999988 6788999999965 7777764 26899999999664 43
Q ss_pred CccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 73 PSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 73 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
.||+|++ +.+++. .+++++.++|+| ||.+++..
T Consensus 166 ~~D~v~~-----~~~~~~--~~l~~~~~~L~~---gG~l~~~~ 198 (258)
T 2pwy_A 166 AYDGVAL-----DLMEPW--KVLEKAALALKP---DRFLVAYL 198 (258)
T ss_dssp CEEEEEE-----ESSCGG--GGHHHHHHHEEE---EEEEEEEE
T ss_pred CcCEEEE-----CCcCHH--HHHHHHHHhCCC---CCEEEEEe
Confidence 5999998 345555 779999999999 88888866
No 148
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.47 E-value=1.8e-13 Score=101.07 Aligned_cols=97 Identities=12% Similarity=0.184 Sum_probs=72.4
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeC-ch-hhccCCCC----------------CCeeEEecCCcc---c--
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDL-PH-AVTDMPQT----------------DNLKYIEGDMFQ---F-- 70 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~-~~-~~~~a~~~----------------~~~~~~~~d~~~---~-- 70 (180)
.++.+|||||||+|.++..+++.. ..+++++|+ +. +++.+++. .++++...+..+ .
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 467799999999999999888763 348999999 55 77665431 367777554322 1
Q ss_pred ----CCCccEEEeccccccCChHHHHHHHHHHHHhhc---cCCCCcEEEEE
Q 030291 71 ----IPPSDAFFFKTVFHFFDDEDCLKLLKKCREAIA---SNGERGKVLII 114 (180)
Q Consensus 71 ----~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~---p~~~~G~~~~~ 114 (180)
...||+|++..+++|.++.. .+++.+.++|+ | ++||.+++.
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~~~~~--~ll~~l~~~Lk~~~p-~~gG~l~v~ 204 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFHQAHD--ALLRSVKMLLALPAN-DPTAVALVT 204 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCGGGHH--HHHHHHHHHBCCTTT-CTTCEEEEE
T ss_pred hhccCCCCCEEEEeCcccChHHHH--HHHHHHHHHhcccCC-CCCCEEEEE
Confidence 24699999999999877766 78999999999 6 225766663
No 149
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.47 E-value=3.6e-14 Score=102.19 Aligned_cols=99 Identities=10% Similarity=0.089 Sum_probs=75.4
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCcc---cC--CCccEEEe-cc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQ---FI--PPSDAFFF-KT 81 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~---~~--~~~D~v~~-~~ 81 (180)
.++.+|||||||+|.++..+++.. ..+++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|++ .+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSC-EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcC-CCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 567899999999999999986653 34899999976 8888764 3678999999854 23 35999999 55
Q ss_pred cc--ccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 82 VF--HFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 82 ~l--~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
.+ +.........++++++++||| ||.+++.+.
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~Lkp---gG~l~~~~~ 171 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKP---GGVLTYCNL 171 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEE---EEEEEECCH
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCC---CeEEEEEec
Confidence 43 233333444779999999999 888887654
No 150
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.47 E-value=5.2e-14 Score=101.36 Aligned_cols=134 Identities=10% Similarity=0.015 Sum_probs=98.8
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCcccCC--CccEEEeccccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQFIP--PSDAFFFKTVFH 84 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~~~~--~~D~v~~~~~l~ 84 (180)
+.++.+|||||||+|.++..+....|..+|+++|+++ +++.++. ..+.++.+.|.....+ .||+++++-++|
T Consensus 130 i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti~ 209 (281)
T 3lcv_B 130 LPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLP 209 (281)
T ss_dssp SCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCHH
T ss_pred cCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHHH
Confidence 3568899999999999999999998999999999966 8888874 4568889999976433 699999999999
Q ss_pred cCChHHHHHHHHHHHHhhccCCCCcEEEEEEe--eeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCe
Q 030291 85 FFDDEDCLKLLKKCREAIASNGERGKVLIIDI--VIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFT 162 (180)
Q Consensus 85 ~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 162 (180)
|++++.....+ ++.+.|++ +|.++-++. ...... .+ ...-.+.|++.+.+.|+.
T Consensus 210 ~Le~q~kg~g~-~ll~aL~~---~~vvVSfp~ksl~Grs~----------gm----------~~~Y~~~~e~~~~~~g~~ 265 (281)
T 3lcv_B 210 CLETQQRGSGW-EVIDIVNS---PNIVVTFPTKSLGQRSK----------GM----------FQNYSQSFESQARERSCR 265 (281)
T ss_dssp HHHHHSTTHHH-HHHHHSSC---SEEEEEEECC-----------------CH----------HHHHHHHHHHHHHHHTCC
T ss_pred HhhhhhhHHHH-HHHHHhCC---CCEEEeccchhhcCCCc----------ch----------hhHHHHHHHHHHHhcCCc
Confidence 99988766677 99999999 444444433 111000 00 112347788999999994
Q ss_pred EEEEeecCC
Q 030291 163 HYKIAPIFG 171 (180)
Q Consensus 163 ~~~~~~~~~ 171 (180)
++...++.
T Consensus 266 -~~~~~~~n 273 (281)
T 3lcv_B 266 -IQRLEIGN 273 (281)
T ss_dssp -EEEEEETT
T ss_pred -eeeeeecC
Confidence 44444433
No 151
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.47 E-value=5.4e-14 Score=109.10 Aligned_cols=108 Identities=15% Similarity=0.225 Sum_probs=81.3
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccC-------CC--------CCCeeEEecCCc
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDM-------PQ--------TDNLKYIEGDMF 68 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a-------~~--------~~~~~~~~~d~~ 68 (180)
+++.+. +.++.+|||||||+|.++..+++..+..+++++|+++ +++.| ++ ..++++.++|..
T Consensus 234 ml~~l~--l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~ 311 (433)
T 1u2z_A 234 VYQQCQ--LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSF 311 (433)
T ss_dssp HHHHTT--CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCS
T ss_pred HHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcc
Confidence 444444 6778999999999999999999987666899999965 76666 32 268999887543
Q ss_pred c-------cCCCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCC
Q 030291 69 Q-------FIPPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDE 120 (180)
Q Consensus 69 ~-------~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~ 120 (180)
. ..+.||+|+++..+ +.++. ..+|+++.+.|+| ||.+++.+...+.
T Consensus 312 ~~~~~~~~~~~~FDvIvvn~~l-~~~d~--~~~L~el~r~LKp---GG~lVi~d~f~p~ 364 (433)
T 1u2z_A 312 VDNNRVAELIPQCDVILVNNFL-FDEDL--NKKVEKILQTAKV---GCKIISLKSLRSL 364 (433)
T ss_dssp TTCHHHHHHGGGCSEEEECCTT-CCHHH--HHHHHHHHTTCCT---TCEEEESSCSSCT
T ss_pred ccccccccccCCCCEEEEeCcc-ccccH--HHHHHHHHHhCCC---CeEEEEeeccCCc
Confidence 2 13469999987666 23333 4779999999999 9999998655443
No 152
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.46 E-value=5.9e-13 Score=95.76 Aligned_cols=129 Identities=8% Similarity=0.049 Sum_probs=97.2
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcccCC---CccEEEecc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQFIP---PSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~~~---~~D~v~~~~ 81 (180)
.+++.+|||||||+|.++..+++..|..+++++|+++ +++.|++ ..++++.++|.++... .||+|++.+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 4677899999999999999999998777899999966 8888875 3579999999987543 499988755
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCC
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGF 161 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 161 (180)
+- ......+|....+.|++ ++.+++... ...+.+++.+.+.||
T Consensus 99 mG----g~lI~~IL~~~~~~L~~---~~~lIlq~~------------------------------~~~~~lr~~L~~~Gf 141 (244)
T 3gnl_A 99 MG----GTLIRTILEEGAAKLAG---VTKLILQPN------------------------------IAAWQLREWSEQNNW 141 (244)
T ss_dssp EC----HHHHHHHHHHTGGGGTT---CCEEEEEES------------------------------SCHHHHHHHHHHHTE
T ss_pred Cc----hHHHHHHHHHHHHHhCC---CCEEEEEcC------------------------------CChHHHHHHHHHCCC
Confidence 43 34455889999999998 777777431 134678888999999
Q ss_pred eEEEEe---ecCCceeEEEE
Q 030291 162 THYKIA---PIFGIKSLIEV 178 (180)
Q Consensus 162 ~~~~~~---~~~~~~~~~~~ 178 (180)
.+++.. ...-++.++.+
T Consensus 142 ~i~~E~lv~e~~k~Yeii~~ 161 (244)
T 3gnl_A 142 LITSEAILREDNKVYEIMVL 161 (244)
T ss_dssp EEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEEEECCEEEEEEEE
Confidence 986544 22334444444
No 153
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.46 E-value=2.4e-13 Score=94.66 Aligned_cols=99 Identities=9% Similarity=0.077 Sum_probs=78.2
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCccc-----CCCccEEEecc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQF-----IPPSDAFFFKT 81 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~-----~~~~D~v~~~~ 81 (180)
.++.+|||+|||+|.++..+++. +..+++++|+++ +++.+++ ..++++.++|+.+. ...||+|+++.
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECC
Confidence 46789999999999999987775 355899999965 8888875 25899999998652 34699999988
Q ss_pred ccccCChHHHHHHHHHHHH--hhccCCCCcEEEEEEee
Q 030291 82 VFHFFDDEDCLKLLKKCRE--AIASNGERGKVLIIDIV 117 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~--~L~p~~~~G~~~~~~~~ 117 (180)
.+++. .....++++.+.+ +|+| ||.+++....
T Consensus 122 p~~~~-~~~~~~~l~~~~~~~~L~p---gG~l~~~~~~ 155 (189)
T 3p9n_A 122 PYNVD-SADVDAILAALGTNGWTRE---GTVAVVERAT 155 (189)
T ss_dssp CTTSC-HHHHHHHHHHHHHSSSCCT---TCEEEEEEET
T ss_pred CCCcc-hhhHHHHHHHHHhcCccCC---CeEEEEEecC
Confidence 86654 2334478999999 9999 8888886543
No 154
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.46 E-value=1e-13 Score=105.46 Aligned_cols=104 Identities=14% Similarity=0.195 Sum_probs=82.3
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC-------CCCeeEEecCCcc-cC-CCcc
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ-------TDNLKYIEGDMFQ-FI-PPSD 75 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-------~~~~~~~~~d~~~-~~-~~~D 75 (180)
+++.+. ..++.+|||||||+|.++..+++. +..+++++|+++++..+++ ..+++++.+|+.+ +. ..||
T Consensus 42 i~~~l~--~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D 118 (348)
T 2y1w_A 42 ILQNHT--DFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVD 118 (348)
T ss_dssp HHHTGG--GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEE
T ss_pred HHhccc--cCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCcee
Confidence 334444 457789999999999999988886 3568999999776666653 2689999999965 33 3699
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEE
Q 030291 76 AFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 76 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
+|++..+++|+..+.....+.+++++|+| ||.+++.
T Consensus 119 ~Ivs~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~li~~ 154 (348)
T 2y1w_A 119 IIISEPMGYMLFNERMLESYLHAKKYLKP---SGNMFPT 154 (348)
T ss_dssp EEEECCCBTTBTTTSHHHHHHHGGGGEEE---EEEEESC
T ss_pred EEEEeCchhcCChHHHHHHHHHHHhhcCC---CeEEEEe
Confidence 99999998888776666788899999999 7877754
No 155
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.45 E-value=4.5e-14 Score=113.75 Aligned_cols=103 Identities=15% Similarity=0.206 Sum_probs=83.2
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCcc---c--CCCccEEEec
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQ---F--IPPSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~---~--~~~~D~v~~~ 80 (180)
+..+.+|||||||+|.++..|++. +++|+|+|.++ +++.|+. ..+++|.++++.+ . ...||+|++.
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~ 141 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGL 141 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEE
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEEC
Confidence 345679999999999999999998 78899999976 8887763 2478999999854 2 2369999999
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCC
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDE 120 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~ 120 (180)
.++||++++.....+.++.+.|++ +|..++......+
T Consensus 142 e~~ehv~~~~~~~~~~~~~~tl~~---~~~~~~~~~~~~e 178 (569)
T 4azs_A 142 SVFHHIVHLHGIDEVKRLLSRLAD---VTQAVILELAVKE 178 (569)
T ss_dssp SCHHHHHHHHCHHHHHHHHHHHHH---HSSEEEEECCCTT
T ss_pred cchhcCCCHHHHHHHHHHHHHhcc---ccceeeEEecccc
Confidence 999999988755556778888999 7888887765433
No 156
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.45 E-value=1.1e-13 Score=98.15 Aligned_cols=99 Identities=15% Similarity=0.130 Sum_probs=79.2
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHC-CCCeEEEeeCch-hhccCCC------CCCeeEEecCCcccC---CC
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAF-PGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQFI---PP 73 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~~---~~ 73 (180)
+++.+. ..++.+|||||||+|.++..+++.. +..+++++|+++ +++.+++ ..++++.++|..... ..
T Consensus 69 ~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 146 (215)
T 2yxe_A 69 MCELLD--LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAP 146 (215)
T ss_dssp HHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCC
T ss_pred HHHhhC--CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCC
Confidence 344444 5678899999999999999999886 558999999965 8877764 357999999985533 36
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 74 SDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 74 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
||+|++..+++++++ ++.++|+| ||.+++...
T Consensus 147 fD~v~~~~~~~~~~~--------~~~~~L~p---gG~lv~~~~ 178 (215)
T 2yxe_A 147 YDRIYTTAAGPKIPE--------PLIRQLKD---GGKLLMPVG 178 (215)
T ss_dssp EEEEEESSBBSSCCH--------HHHHTEEE---EEEEEEEES
T ss_pred eeEEEECCchHHHHH--------HHHHHcCC---CcEEEEEEC
Confidence 999999999998873 67899999 888887653
No 157
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.45 E-value=1.9e-13 Score=100.75 Aligned_cols=93 Identities=18% Similarity=0.255 Sum_probs=76.4
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHH-CCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcccCC--CccEEEecc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEA-FPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQFIP--PSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~-~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~~~--~~D~v~~~~ 81 (180)
+.++.+|||+|||+|.++..+++. .|..+++++|.++ +++.+++ ..++++.++|+.+..+ .||+|++.
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~V~~~- 188 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFLD- 188 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEEEC-
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCccCEEEEC-
Confidence 567889999999999999999998 6788999999965 7777764 1579999999966443 59999983
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
.+++. .+++++.++|+| ||.+++..
T Consensus 189 ----~~~~~--~~l~~~~~~L~p---gG~l~~~~ 213 (277)
T 1o54_A 189 ----VPDPW--NYIDKCWEALKG---GGRFATVC 213 (277)
T ss_dssp ----CSCGG--GTHHHHHHHEEE---EEEEEEEE
T ss_pred ----CcCHH--HHHHHHHHHcCC---CCEEEEEe
Confidence 35555 779999999999 88888865
No 158
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.45 E-value=8e-13 Score=95.28 Aligned_cols=95 Identities=13% Similarity=0.165 Sum_probs=76.0
Q ss_pred cCCCeEEEeCCcccHHHHHHHHH----CCCCeEEEeeCch-hhccCCC-CCCeeEEecCCccc--C----C-CccEEEec
Q 030291 14 QGLRSMVDVGGGTGAFARIISEA----FPGIKCTVLDLPH-AVTDMPQ-TDNLKYIEGDMFQF--I----P-PSDAFFFK 80 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~----~~~~~~~~~D~~~-~~~~a~~-~~~~~~~~~d~~~~--~----~-~~D~v~~~ 80 (180)
.++.+|||||||+|..+..+++. .++.+++++|+++ +++.++. ..+++++++|..+. . . .||+|++.
T Consensus 80 ~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d 159 (236)
T 2bm8_A 80 LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFID 159 (236)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEE
T ss_pred cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEEC
Confidence 35689999999999999999887 6788999999965 8888765 46899999999652 1 2 59999986
Q ss_pred cccccCChHHHHHHHHHHHH-hhccCCCCcEEEEEEe
Q 030291 81 TVFHFFDDEDCLKLLKKCRE-AIASNGERGKVLIIDI 116 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~-~L~p~~~~G~~~~~~~ 116 (180)
.. |. +. ..++.++.+ +|+| ||.+++.+.
T Consensus 160 ~~--~~-~~--~~~l~~~~r~~Lkp---GG~lv~~d~ 188 (236)
T 2bm8_A 160 NA--HA-NT--FNIMKWAVDHLLEE---GDYFIIEDM 188 (236)
T ss_dssp SS--CS-SH--HHHHHHHHHHTCCT---TCEEEECSC
T ss_pred Cc--hH-hH--HHHHHHHHHhhCCC---CCEEEEEeC
Confidence 65 32 33 378999997 9999 898888654
No 159
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.45 E-value=9.5e-14 Score=100.85 Aligned_cols=99 Identities=13% Similarity=0.126 Sum_probs=78.4
Q ss_pred CCCeEEEeCCcccHHHHHHHHH--CCCCeEEEeeCch-hhccCCC---CC-------C----------------------
Q 030291 15 GLRSMVDVGGGTGAFARIISEA--FPGIKCTVLDLPH-AVTDMPQ---TD-------N---------------------- 59 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~--~~~~~~~~~D~~~-~~~~a~~---~~-------~---------------------- 59 (180)
.+.+|||+|||+|.++..+++. .+..+++++|+++ +++.+++ .. +
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 5679999999999999999988 6677899999966 8888774 22 2
Q ss_pred ---ee-------------EEecCCcccC-------C-CccEEEeccccccCCh-------HHHHHHHHHHHHhhccCCCC
Q 030291 60 ---LK-------------YIEGDMFQFI-------P-PSDAFFFKTVFHFFDD-------EDCLKLLKKCREAIASNGER 108 (180)
Q Consensus 60 ---~~-------------~~~~d~~~~~-------~-~~D~v~~~~~l~~~~~-------~~~~~~l~~~~~~L~p~~~~ 108 (180)
++ +.++|+.+.. + .||+|+++-.+.+..+ .....+++++.++|+| |
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---g 207 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPA---H 207 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCT---T
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCC---C
Confidence 66 9999997643 3 6999999876655443 4456889999999999 9
Q ss_pred cEEEEEEe
Q 030291 109 GKVLIIDI 116 (180)
Q Consensus 109 G~~~~~~~ 116 (180)
|.++++..
T Consensus 208 G~l~~~~~ 215 (250)
T 1o9g_A 208 AVIAVTDR 215 (250)
T ss_dssp CEEEEEES
T ss_pred cEEEEeCc
Confidence 99998543
No 160
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.44 E-value=3.6e-13 Score=97.01 Aligned_cols=99 Identities=18% Similarity=0.237 Sum_probs=73.2
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCC------------CCCCeeEEecCCccc----C--CCc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMP------------QTDNLKYIEGDMFQF----I--PPS 74 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~------------~~~~~~~~~~d~~~~----~--~~~ 74 (180)
++..+|||||||+|.++..+++.+|+..++++|++. +++.++ ...+++++++|+.+. + ..+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 456789999999999999999999999999999976 776553 246899999998651 2 369
Q ss_pred cEEEeccccccCChH--H----HHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 75 DAFFFKTVFHFFDDE--D----CLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 75 D~v~~~~~l~~~~~~--~----~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
|.|++.+.-.+.... . ...+++++.++|+| ||.+++..
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~Lkp---GG~l~~~t 168 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRV---GGLVYTIT 168 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEE---EEEEEEEE
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCC---CCEEEEEe
Confidence 999875432221110 0 13689999999999 88887764
No 161
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.44 E-value=2e-13 Score=98.10 Aligned_cols=138 Identities=12% Similarity=0.078 Sum_probs=83.0
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-CCCeeEEe-cCCc----ccCC--CccEEEecccccc
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-TDNLKYIE-GDMF----QFIP--PSDAFFFKTVFHF 85 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-~~~~~~~~-~d~~----~~~~--~~D~v~~~~~l~~ 85 (180)
.+.+|||||||+|.++..+++.. ..+++++|+++ |++.+++ ..++.... .++. +..+ .+|.+.+..++.+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g-~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~ 115 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNG-AKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFIS 115 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSC
T ss_pred CCCEEEEEccCCCHHHHHHHhcC-CCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhh
Confidence 45699999999999999999883 24899999966 8887654 23322211 1110 1111 2455544444443
Q ss_pred CChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEe-ecCCcccCHHHHHHHHHHcCCeEE
Q 030291 86 FDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNF-NVGGKERTEQEWGSLFVNAGFTHY 164 (180)
Q Consensus 86 ~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~aGf~~~ 164 (180)
+ . .++++++++|+| ||.+++.. .+. +...+......... ....+..+.+++.++++++||++.
T Consensus 116 l---~--~~l~~i~rvLkp---gG~lv~~~--~p~------~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~ 179 (232)
T 3opn_A 116 L---D--LILPPLYEILEK---NGEVAALI--KPQ------FEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVK 179 (232)
T ss_dssp G---G--GTHHHHHHHSCT---TCEEEEEE--CHH------HHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEE
T ss_pred H---H--HHHHHHHHhccC---CCEEEEEE--Ccc------cccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEE
Confidence 3 2 779999999999 89888853 110 00000011000000 001123477899999999999988
Q ss_pred EEeec
Q 030291 165 KIAPI 169 (180)
Q Consensus 165 ~~~~~ 169 (180)
.+...
T Consensus 180 ~~~~~ 184 (232)
T 3opn_A 180 GLTFS 184 (232)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 77643
No 162
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.44 E-value=2.3e-13 Score=97.55 Aligned_cols=97 Identities=16% Similarity=0.201 Sum_probs=77.9
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----CCCeeEEecCCcccC---CCccE
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----TDNLKYIEGDMFQFI---PPSDA 76 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----~~~~~~~~~d~~~~~---~~~D~ 76 (180)
+++.+. ..++.+|||||||+|.++..+++.. .+++++|+++ +++.+++ ..++++.++|..+.. ..||+
T Consensus 62 ~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 137 (231)
T 1vbf_A 62 MLDELD--LHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDR 137 (231)
T ss_dssp HHHHTT--CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEE
T ss_pred HHHhcC--CCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccE
Confidence 344444 5678899999999999999999985 7899999965 8877764 238999999986522 36999
Q ss_pred EEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 77 FFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 77 v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
|++..+++|+.+ ++.++|+| ||.+++...
T Consensus 138 v~~~~~~~~~~~--------~~~~~L~p---gG~l~~~~~ 166 (231)
T 1vbf_A 138 VVVWATAPTLLC--------KPYEQLKE---GGIMILPIG 166 (231)
T ss_dssp EEESSBBSSCCH--------HHHHTEEE---EEEEEEEEC
T ss_pred EEECCcHHHHHH--------HHHHHcCC---CcEEEEEEc
Confidence 999999998874 47889999 888888754
No 163
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.43 E-value=2.6e-13 Score=99.17 Aligned_cols=100 Identities=11% Similarity=0.162 Sum_probs=75.8
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC---C-------CCeeEEecCCccc----------C
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ---T-------DNLKYIEGDMFQF----------I 71 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~---~-------~~~~~~~~d~~~~----------~ 71 (180)
..++.+|||+|||+|.++..+++..|..+++++|+++ +++.+++ . .+++++++|+.+. .
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 4567899999999999999999999888999999965 7777654 1 2589999999654 2
Q ss_pred CCccEEEecccccc----------------CChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 72 PPSDAFFFKTVFHF----------------FDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 72 ~~~D~v~~~~~l~~----------------~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
..||+|+++-.+.. ........+++.+.++|+| ||.+++..
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~ 170 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVS---GGQLSLIS 170 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCC---CCEEEEEE
Confidence 35999999733221 1112245889999999999 88888753
No 164
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.43 E-value=2.2e-12 Score=95.83 Aligned_cols=99 Identities=16% Similarity=0.238 Sum_probs=72.7
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----------CCCeeEEecCCcccC----CCccEE
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----------TDNLKYIEGDMFQFI----PPSDAF 77 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----------~~~~~~~~~d~~~~~----~~~D~v 77 (180)
+++.+|||||||+|..+..+++..+..+++++|+++ +++.+++ .++++++.+|..+.. ..||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 467899999999999999999887778999999965 8877753 358999999986632 369999
Q ss_pred EeccccccCChHHH--HHHHHHHHHhhccCCCCcEEEEEE
Q 030291 78 FFKTVFHFFDDEDC--LKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 78 ~~~~~l~~~~~~~~--~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
++...-...+.... .++++.++++|+| ||.+++..
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~Lkp---gG~lv~~~ 198 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNP---GGIFVAQN 198 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEE---EEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCC---CCEEEEec
Confidence 99655433333221 4789999999999 77666643
No 165
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.43 E-value=4.2e-13 Score=102.51 Aligned_cols=95 Identities=18% Similarity=0.177 Sum_probs=73.7
Q ss_pred cCCCeEEEeCCc------ccHHHHHHHH-HCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcc--c-------CCCccE
Q 030291 14 QGLRSMVDVGGG------TGAFARIISE-AFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQ--F-------IPPSDA 76 (180)
Q Consensus 14 ~~~~~iLdiG~G------~G~~~~~l~~-~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~--~-------~~~~D~ 76 (180)
.++.+||||||| +|..+..+++ .+|+.+++++|+++ |. ....+++++++|+.+ . ..+||+
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDl 291 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---VDELRIRTIQGDQNDAEFLDRIARRYGPFDI 291 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---GCBTTEEEEECCTTCHHHHHHHHHHHCCEEE
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---hcCCCcEEEEecccccchhhhhhcccCCccE
Confidence 467899999999 6555655555 46899999999966 63 245789999999965 1 257999
Q ss_pred EEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 77 FFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 77 v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
|++... |++.+.. .+|+++.++||| ||.+++.+..
T Consensus 292 Visdgs-H~~~d~~--~aL~el~rvLKP---GGvlVi~Dl~ 326 (419)
T 3sso_A 292 VIDDGS-HINAHVR--TSFAALFPHVRP---GGLYVIEDMW 326 (419)
T ss_dssp EEECSC-CCHHHHH--HHHHHHGGGEEE---EEEEEEECGG
T ss_pred EEECCc-ccchhHH--HHHHHHHHhcCC---CeEEEEEecc
Confidence 998754 6655554 789999999999 8888887765
No 166
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.43 E-value=2.6e-13 Score=103.24 Aligned_cols=95 Identities=15% Similarity=0.156 Sum_probs=75.2
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC-------CCCeeEEecCCcc-cC--CCccEEEeccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ-------TDNLKYIEGDMFQ-FI--PPSDAFFFKTV 82 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-------~~~~~~~~~d~~~-~~--~~~D~v~~~~~ 82 (180)
+.++.+|||||||+|.++..+++. +..+++++|++++++.+++ ..+++++++|+.+ +. ..||+|++..+
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWM 142 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCC
T ss_pred cCCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccc
Confidence 456789999999999999999888 3558999999877777764 3459999999966 33 36999999776
Q ss_pred cccC---ChHHHHHHHHHHHHhhccCCCCcEEEE
Q 030291 83 FHFF---DDEDCLKLLKKCREAIASNGERGKVLI 113 (180)
Q Consensus 83 l~~~---~~~~~~~~l~~~~~~L~p~~~~G~~~~ 113 (180)
.+++ .+.. .++..+.++|+| ||.++.
T Consensus 143 ~~~l~~~~~~~--~~l~~~~r~Lkp---gG~li~ 171 (349)
T 3q7e_A 143 GYCLFYESMLN--TVLHARDKWLAP---DGLIFP 171 (349)
T ss_dssp BBTBTBTCCHH--HHHHHHHHHEEE---EEEEES
T ss_pred cccccCchhHH--HHHHHHHHhCCC---CCEEcc
Confidence 4444 4444 789999999999 777764
No 167
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.43 E-value=2.2e-13 Score=102.35 Aligned_cols=98 Identities=15% Similarity=0.233 Sum_probs=78.9
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCC-CCeEEEeeCch-hhccCCC------CCCeeEEecCCccc---CCC
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFP-GIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQF---IPP 73 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~-~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~---~~~ 73 (180)
+++.+. .+++.+|||||||+|.++..+++..+ ..+++++|+++ +++.+++ ..++++.++|+.+. .+.
T Consensus 67 l~~~l~--~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~ 144 (317)
T 1dl5_A 67 FMEWVG--LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSP 144 (317)
T ss_dssp HHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCC
T ss_pred HHHhcC--CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCC
Confidence 344444 67789999999999999999998865 47899999965 8877764 35699999999652 246
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 74 SDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 74 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
||+|++..++++++ +.+.+.|+| ||.+++..
T Consensus 145 fD~Iv~~~~~~~~~--------~~~~~~Lkp---gG~lvi~~ 175 (317)
T 1dl5_A 145 YDVIFVTVGVDEVP--------ETWFTQLKE---GGRVIVPI 175 (317)
T ss_dssp EEEEEECSBBSCCC--------HHHHHHEEE---EEEEEEEB
T ss_pred eEEEEEcCCHHHHH--------HHHHHhcCC---CcEEEEEE
Confidence 99999999999887 357789999 88888864
No 168
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.42 E-value=1.9e-13 Score=99.19 Aligned_cols=98 Identities=12% Similarity=0.142 Sum_probs=77.6
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCC-CCeEEEeeCch-hhccCCC-------CCCeeEEecCCccc------CCCccEE
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFP-GIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQF------IPPSDAF 77 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~-~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~------~~~~D~v 77 (180)
..++.+|||||||+|..+..+++..| +.+++++|+++ +++.+++ ..++++.++|+.+. ...||+|
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 45688999999999999999999987 78999999965 8887764 35899999998552 1269999
Q ss_pred EeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeee
Q 030291 78 FFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVI 118 (180)
Q Consensus 78 ~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~ 118 (180)
++... ......+++++.++|+| ||.+++.+...
T Consensus 141 ~~d~~-----~~~~~~~l~~~~~~Lkp---GG~lv~~~~~~ 173 (248)
T 3tfw_A 141 FIDAD-----KPNNPHYLRWALRYSRP---GTLIIGDNVVR 173 (248)
T ss_dssp EECSC-----GGGHHHHHHHHHHTCCT---TCEEEEECCSG
T ss_pred EECCc-----hHHHHHHHHHHHHhcCC---CeEEEEeCCCc
Confidence 98653 22234789999999999 88877765543
No 169
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.42 E-value=1.7e-13 Score=108.12 Aligned_cols=103 Identities=16% Similarity=0.225 Sum_probs=81.8
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC-------CCCeeEEecCCcc-cCC-Ccc
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ-------TDNLKYIEGDMFQ-FIP-PSD 75 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-------~~~~~~~~~d~~~-~~~-~~D 75 (180)
+++.+. ..++.+|||||||+|.++..+++. +..+++++|++++++.+++ ..+++++++|+.+ +.+ .||
T Consensus 150 il~~l~--~~~~~~VLDiGcGtG~la~~la~~-~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~fD 226 (480)
T 3b3j_A 150 ILQNHT--DFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVD 226 (480)
T ss_dssp HHHTGG--GTTTCEEEEESCSTTHHHHHHHHT-TCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEE
T ss_pred HHHhhh--hcCCCEEEEecCcccHHHHHHHHc-CCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccCCCeE
Confidence 344444 456789999999999999988874 5679999999767666653 3689999999976 333 699
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEE
Q 030291 76 AFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLI 113 (180)
Q Consensus 76 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~ 113 (180)
+|+++.+++++.++.....+.+++++|+| ||.+++
T Consensus 227 ~Ivs~~~~~~~~~e~~~~~l~~~~~~Lkp---gG~li~ 261 (480)
T 3b3j_A 227 IIISEPMGYMLFNERMLESYLHAKKYLKP---SGNMFP 261 (480)
T ss_dssp EEECCCCHHHHTCHHHHHHHHHGGGGEEE---EEEEES
T ss_pred EEEEeCchHhcCcHHHHHHHHHHHHhcCC---CCEEEE
Confidence 99999888888777666788899999999 777775
No 170
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.42 E-value=5.1e-13 Score=101.23 Aligned_cols=94 Identities=21% Similarity=0.275 Sum_probs=74.4
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC-------CCCeeEEecCCcc-cCC--CccEEEeccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ-------TDNLKYIEGDMFQ-FIP--PSDAFFFKTV 82 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-------~~~~~~~~~d~~~-~~~--~~D~v~~~~~ 82 (180)
..++.+|||||||+|.++..+++.. ..+++++|++++++.+++ ..++++.++|+.+ +.+ .||+|++..+
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAG-AKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWM 140 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCC
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcC-CCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCc
Confidence 5677899999999999999988873 458999999777777664 2689999999965 333 6999998774
Q ss_pred ---cccCChHHHHHHHHHHHHhhccCCCCcEEE
Q 030291 83 ---FHFFDDEDCLKLLKKCREAIASNGERGKVL 112 (180)
Q Consensus 83 ---l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~ 112 (180)
+.+..+.. .++.++.++|+| ||.++
T Consensus 141 ~~~l~~~~~~~--~~l~~~~~~Lkp---gG~li 168 (340)
T 2fyt_A 141 GYFLLFESMLD--SVLYAKNKYLAK---GGSVY 168 (340)
T ss_dssp BTTBTTTCHHH--HHHHHHHHHEEE---EEEEE
T ss_pred hhhccCHHHHH--HHHHHHHhhcCC---CcEEE
Confidence 44444444 789999999999 77776
No 171
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.42 E-value=1.1e-13 Score=98.69 Aligned_cols=98 Identities=15% Similarity=0.255 Sum_probs=77.8
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHC-CCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcc---cC------CCcc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAF-PGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQ---FI------PPSD 75 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~---~~------~~~D 75 (180)
.++.+|||||||+|..+..+++.. ++.+++++|+++ +++.+++ ..+++++++|..+ .. ..||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 467899999999999999999875 478999999965 8888775 2469999999744 22 3699
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 76 AFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 76 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
+|++....++..+.. .++..+ ++|+| ||.+++.+..
T Consensus 137 ~V~~d~~~~~~~~~~--~~~~~~-~~Lkp---gG~lv~~~~~ 172 (221)
T 3u81_A 137 MVFLDHWKDRYLPDT--LLLEKC-GLLRK---GTVLLADNVI 172 (221)
T ss_dssp EEEECSCGGGHHHHH--HHHHHT-TCCCT---TCEEEESCCC
T ss_pred EEEEcCCcccchHHH--HHHHhc-cccCC---CeEEEEeCCC
Confidence 999988777665444 567777 99999 8888776554
No 172
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.41 E-value=3.9e-13 Score=103.16 Aligned_cols=100 Identities=14% Similarity=0.115 Sum_probs=78.2
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC-------CCCeeEEecCCcc-cC-CCccEEEecccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ-------TDNLKYIEGDMFQ-FI-PPSDAFFFKTVF 83 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-------~~~~~~~~~d~~~-~~-~~~D~v~~~~~l 83 (180)
..++.+|||||||+|.++..+++.. ..+++++|++++++.+++ ..+++++++|+.+ .. ..||+|++..+.
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMG 139 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCCB
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcChh
Confidence 5677899999999999999999883 348999999877777764 3569999999965 23 469999997766
Q ss_pred ccCCh-HHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 84 HFFDD-EDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 84 ~~~~~-~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
+++.. .....++..+.++|+| ||.+++...
T Consensus 140 ~~l~~e~~~~~~l~~~~~~Lkp---gG~li~~~~ 170 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWLKP---TGVMYPSHA 170 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHEEE---EEEEESSEE
T ss_pred hcccchHHHHHHHHHHHhhCCC---CeEEEEecC
Confidence 66543 2244789999999999 787776443
No 173
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.41 E-value=5.3e-13 Score=96.54 Aligned_cols=98 Identities=16% Similarity=0.197 Sum_probs=77.7
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCC-CCeEEEeeCch-hhccCCC-------CCCeeEEecCCcc---c------CCCc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFP-GIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQ---F------IPPS 74 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~-~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~---~------~~~~ 74 (180)
..++.+|||||||+|..+..+++..+ +.+++++|+++ +++.+++ ..++++.++|..+ . ...|
T Consensus 58 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~f 137 (242)
T 3r3h_A 58 LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQF 137 (242)
T ss_dssp HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCE
T ss_pred hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCE
Confidence 35678999999999999999999875 78999999965 8888875 3589999999855 1 2579
Q ss_pred cEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeee
Q 030291 75 DAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVI 118 (180)
Q Consensus 75 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~ 118 (180)
|+|++... ......+++++.++|+| ||.+++.+...
T Consensus 138 D~V~~d~~-----~~~~~~~l~~~~~~Lkp---GG~lv~d~~~~ 173 (242)
T 3r3h_A 138 DFIFIDAD-----KTNYLNYYELALKLVTP---KGLIAIDNIFW 173 (242)
T ss_dssp EEEEEESC-----GGGHHHHHHHHHHHEEE---EEEEEEECSSS
T ss_pred eEEEEcCC-----hHHhHHHHHHHHHhcCC---CeEEEEECCcc
Confidence 99998654 22234789999999999 77777765544
No 174
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.41 E-value=7.5e-13 Score=101.62 Aligned_cols=96 Identities=14% Similarity=0.222 Sum_probs=79.0
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCcccC---CCccEEEecccccc
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQFI---PPSDAFFFKTVFHF 85 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~~~---~~~D~v~~~~~l~~ 85 (180)
++.+|||+|||+|.++..+++. +.+++++|+++ +++.+++ ..++++.++|+.+.. ..||+|+++..+|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhh
Confidence 5779999999999999999988 66899999976 8888875 235899999997632 36999999998887
Q ss_pred ---CChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 86 ---FDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 86 ---~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
.......++++++.++|+| ||.++++.
T Consensus 311 ~~~~~~~~~~~~l~~~~~~Lkp---GG~l~iv~ 340 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRP---GGVFFLVS 340 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred cccccHHHHHHHHHHHHHhcCc---CcEEEEEE
Confidence 3334455899999999999 88888864
No 175
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.41 E-value=8.8e-13 Score=97.05 Aligned_cols=97 Identities=12% Similarity=0.043 Sum_probs=72.3
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC--CC------CeeEE--ecCCcc-cCCCccEEEecc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ--TD------NLKYI--EGDMFQ-FIPPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~--~~------~~~~~--~~d~~~-~~~~~D~v~~~~ 81 (180)
++++.+|||||||+|.++..+++. .+++++|+++|+..+++ .. ++.+. ++|+.+ +...||+|++..
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~Vvsd~ 156 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKMEPFQADTVLCDI 156 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCCCCCCSEEEECC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCCCCCcCEEEECC
Confidence 567889999999999999998887 47999999776544432 12 78899 899855 333699999987
Q ss_pred ccccCChHH-----HHHHHHHHHHhhccCCCCc--EEEEEEe
Q 030291 82 VFHFFDDED-----CLKLLKKCREAIASNGERG--KVLIIDI 116 (180)
Q Consensus 82 ~l~~~~~~~-----~~~~l~~~~~~L~p~~~~G--~~~~~~~ 116 (180)
+ ++..+.. ...+|+.+.++|+| || .+++..+
T Consensus 157 ~-~~~~~~~~d~~~~l~~L~~~~r~Lkp---GG~~~~v~~~~ 194 (276)
T 2wa2_A 157 G-ESNPTAAVEASRTLTVLNVISRWLEY---NQGCGFCVKVL 194 (276)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHH---STTCEEEEEES
T ss_pred C-cCCCchhhhHHHHHHHHHHHHHHhcc---CCCcEEEEEeC
Confidence 7 4443321 11378999999999 89 7777544
No 176
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.40 E-value=1.6e-13 Score=98.67 Aligned_cols=96 Identities=14% Similarity=0.265 Sum_probs=76.4
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCccc-----CCCccEEEe
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQF-----IPPSDAFFF 79 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~-----~~~~D~v~~ 79 (180)
..++.+|||||||+|..+..+++..+..+++++|+++ +++.+++ ..++++.++|+.+. ...||+|++
T Consensus 69 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 69 MNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFI 148 (232)
T ss_dssp HHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEE
T ss_pred hcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEE
Confidence 3567899999999999999999987889999999965 8888764 25899999999663 246999997
Q ss_pred ccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 80 KTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
.... .+ ...+++++.++|+| ||.+++.+.
T Consensus 149 ~~~~---~~--~~~~l~~~~~~Lkp---gG~lv~d~~ 177 (232)
T 3ntv_A 149 DAAK---AQ--SKKFFEIYTPLLKH---QGLVITDNV 177 (232)
T ss_dssp ETTS---SS--HHHHHHHHGGGEEE---EEEEEEECT
T ss_pred cCcH---HH--HHHHHHHHHHhcCC---CeEEEEeeC
Confidence 6442 22 33789999999999 777766443
No 177
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.40 E-value=1.8e-12 Score=94.83 Aligned_cols=98 Identities=10% Similarity=0.059 Sum_probs=72.6
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC--CC------CeeEE--ecCCcc-cCCCccEEEecc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ--TD------NLKYI--EGDMFQ-FIPPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~--~~------~~~~~--~~d~~~-~~~~~D~v~~~~ 81 (180)
++++.+|||||||+|.++..+++. .+++++|+++++..+++ .. ++.+. ++|+.+ +...||+|++..
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~V~sd~ 148 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLPVERTDVIMCDV 148 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCCCCCCcEEEEeC
Confidence 567889999999999999988877 57999999776544432 12 68888 899865 223699999987
Q ss_pred ccccCChHH-----HHHHHHHHHHhhccCCCCc--EEEEEEee
Q 030291 82 VFHFFDDED-----CLKLLKKCREAIASNGERG--KVLIIDIV 117 (180)
Q Consensus 82 ~l~~~~~~~-----~~~~l~~~~~~L~p~~~~G--~~~~~~~~ 117 (180)
+ ++.++.. ...+|+.+.++|+| || .+++..+.
T Consensus 149 ~-~~~~~~~~d~~~~l~~L~~~~r~Lkp---GG~~~fv~kv~~ 187 (265)
T 2oxt_A 149 G-ESSPKWSVESERTIKILELLEKWKVK---NPSADFVVKVLC 187 (265)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEEESC
T ss_pred c-ccCCccchhHHHHHHHHHHHHHHhcc---CCCeEEEEEeCC
Confidence 7 5443321 11378999999999 88 77775543
No 178
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.39 E-value=5e-13 Score=97.87 Aligned_cols=93 Identities=15% Similarity=0.208 Sum_probs=76.7
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-CCCeeEEecCCcc-cC--CCccEEEeccccccCCh
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-TDNLKYIEGDMFQ-FI--PPSDAFFFKTVFHFFDD 88 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-~~~~~~~~~d~~~-~~--~~~D~v~~~~~l~~~~~ 88 (180)
.++.+|||||||+|.++..+++..++.+++++|+++ +++.+++ ..++.+..+|+.+ +. .+||+|++..+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~----- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP----- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC-----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh-----
Confidence 467899999999999999999988788999999966 8888875 5678899999854 22 369999986653
Q ss_pred HHHHHHHHHHHHhhccCCCCcEEEEEEeee
Q 030291 89 EDCLKLLKKCREAIASNGERGKVLIIDIVI 118 (180)
Q Consensus 89 ~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~ 118 (180)
.+++++.++|+| ||.+++..+..
T Consensus 159 ----~~l~~~~~~L~p---gG~l~~~~~~~ 181 (269)
T 1p91_A 159 ----CKAEELARVVKP---GGWVITATPGP 181 (269)
T ss_dssp ----CCHHHHHHHEEE---EEEEEEEEECT
T ss_pred ----hhHHHHHHhcCC---CcEEEEEEcCH
Confidence 348999999999 89998887654
No 179
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.39 E-value=4.1e-13 Score=95.73 Aligned_cols=97 Identities=13% Similarity=0.184 Sum_probs=76.7
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCC-CCeEEEeeCch-hhccCCC-------CCCeeEEecCCcccC--------CCcc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFP-GIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQFI--------PPSD 75 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~-~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~~--------~~~D 75 (180)
..++.+|||||||+|..+..+++..| +.+++++|+++ +++.+++ ..++++.++|..+.. ..||
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 35678999999999999999999987 78999999965 8877764 346999999986521 4599
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 76 AFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 76 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
+|++..... ....+++++.++|+| ||.+++.+..
T Consensus 136 ~v~~d~~~~-----~~~~~l~~~~~~L~p---gG~lv~~~~~ 169 (223)
T 3duw_A 136 FIFIDADKQ-----NNPAYFEWALKLSRP---GTVIIGDNVV 169 (223)
T ss_dssp EEEECSCGG-----GHHHHHHHHHHTCCT---TCEEEEESCS
T ss_pred EEEEcCCcH-----HHHHHHHHHHHhcCC---CcEEEEeCCC
Confidence 999865522 233789999999999 8877775543
No 180
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.39 E-value=5.2e-13 Score=95.26 Aligned_cols=97 Identities=11% Similarity=0.122 Sum_probs=76.6
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCC-CCeEEEeeCch-hhccCCC-------CCCeeEEecCCccc---C------CCcc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFP-GIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQF---I------PPSD 75 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~-~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~---~------~~~D 75 (180)
.++.+|||||||+|..+..+++..| +.+++++|+++ +++.+++ ..++++.++|..+. . ..||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 4678999999999999999999876 78999999965 8877764 35699999998542 1 5799
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeee
Q 030291 76 AFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVI 118 (180)
Q Consensus 76 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~ 118 (180)
+|++... ......+++++.++|+| ||.+++.+...
T Consensus 143 ~v~~~~~-----~~~~~~~l~~~~~~L~p---gG~lv~~~~~~ 177 (225)
T 3tr6_A 143 LIYIDAD-----KANTDLYYEESLKLLRE---GGLIAVDNVLR 177 (225)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHHEEE---EEEEEEECSSG
T ss_pred EEEECCC-----HHHHHHHHHHHHHhcCC---CcEEEEeCCCc
Confidence 9997553 22234789999999999 78877766543
No 181
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.39 E-value=3.7e-13 Score=96.86 Aligned_cols=92 Identities=22% Similarity=0.216 Sum_probs=74.6
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCcccCC---CccEEEeccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQFIP---PSDAFFFKTV 82 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~~~---~~D~v~~~~~ 82 (180)
..++.+|||||||+|.++..+++..+ .+++++|+++ +++.+++ ..++++..+|.....+ .||+|++...
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Ii~~~~ 167 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIVTAG 167 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSB
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCCCccEEEECCc
Confidence 56788999999999999999999876 7899999965 7777764 2469999999744332 4999999999
Q ss_pred cccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 83 FHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 83 l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
++++++ ++.+.|+| ||.+++...
T Consensus 168 ~~~~~~--------~~~~~L~p---gG~lvi~~~ 190 (235)
T 1jg1_A 168 APKIPE--------PLIEQLKI---GGKLIIPVG 190 (235)
T ss_dssp BSSCCH--------HHHHTEEE---EEEEEEEEC
T ss_pred HHHHHH--------HHHHhcCC---CcEEEEEEe
Confidence 988764 57889999 788877654
No 182
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.38 E-value=2.7e-13 Score=92.50 Aligned_cols=94 Identities=12% Similarity=0.059 Sum_probs=72.3
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCcccC-------CCccEEEecc
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQFI-------PPSDAFFFKT 81 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~~~-------~~~D~v~~~~ 81 (180)
++.+|||+|||+|.++..+++..+. ++++|+++ +++.+++ ..++++.++|+.+.. ..||+|+++.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 6789999999999999999988544 99999965 8888775 227999999986522 1699999987
Q ss_pred ccccCChHHHHHHHHHHH--HhhccCCCCcEEEEEEee
Q 030291 82 VFHFFDDEDCLKLLKKCR--EAIASNGERGKVLIIDIV 117 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~--~~L~p~~~~G~~~~~~~~ 117 (180)
.++ .+.. .+++.+. ++|+| ||.+++....
T Consensus 119 ~~~--~~~~--~~~~~~~~~~~L~~---gG~~~~~~~~ 149 (171)
T 1ws6_A 119 PYA--MDLA--ALFGELLASGLVEA---GGLYVLQHPK 149 (171)
T ss_dssp CTT--SCTT--HHHHHHHHHTCEEE---EEEEEEEEET
T ss_pred CCc--hhHH--HHHHHHHhhcccCC---CcEEEEEeCC
Confidence 765 3333 4566666 99999 7877775543
No 183
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.38 E-value=1.2e-13 Score=104.49 Aligned_cols=100 Identities=14% Similarity=0.184 Sum_probs=76.5
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHH-CCCCeEEEeeCch-hhccCCC-----------------CCCeeEEec
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEA-FPGIKCTVLDLPH-AVTDMPQ-----------------TDNLKYIEG 65 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~-~~~~~~~~~D~~~-~~~~a~~-----------------~~~~~~~~~ 65 (180)
++..+. +.++.+|||+|||+|.++..+++. .+..+++++|+++ +++.+++ ..++++.++
T Consensus 97 ~l~~l~--~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~ 174 (336)
T 2b25_A 97 ILSMMD--INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK 174 (336)
T ss_dssp HHHHHT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred HHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEEC
Confidence 344444 678889999999999999999987 5668999999965 7777754 158999999
Q ss_pred CCccc---CC--CccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 66 DMFQF---IP--PSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 66 d~~~~---~~--~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
|+.+. .+ .||+|++.. +++. .+++++.++|+| ||.+++...
T Consensus 175 d~~~~~~~~~~~~fD~V~~~~-----~~~~--~~l~~~~~~Lkp---gG~lv~~~~ 220 (336)
T 2b25_A 175 DISGATEDIKSLTFDAVALDM-----LNPH--VTLPVFYPHLKH---GGVCAVYVV 220 (336)
T ss_dssp CTTCCC-------EEEEEECS-----SSTT--TTHHHHGGGEEE---EEEEEEEES
T ss_pred ChHHcccccCCCCeeEEEECC-----CCHH--HHHHHHHHhcCC---CcEEEEEeC
Confidence 99653 22 599999853 2333 469999999999 888887654
No 184
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.38 E-value=9.9e-13 Score=98.11 Aligned_cols=97 Identities=15% Similarity=0.262 Sum_probs=74.9
Q ss_pred CeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCccc---C--CCccEEEeccccc
Q 030291 17 RSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQF---I--PPSDAFFFKTVFH 84 (180)
Q Consensus 17 ~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~---~--~~~D~v~~~~~l~ 84 (180)
.+|||||||+|.++..+++.+|+.+++++|+++ +++.+++ ..+++++++|..+. . ..||+|++....+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 399999999999999999999999999999965 8887764 36899999998652 2 3699999865433
Q ss_pred cCChHH--HHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 85 FFDDED--CLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 85 ~~~~~~--~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
...... ..++++.++++|+| ||.+++...
T Consensus 171 ~~~~~~L~t~efl~~~~r~Lkp---gGvlv~~~~ 201 (317)
T 3gjy_A 171 AITPQNFTTVEFFEHCHRGLAP---GGLYVANCG 201 (317)
T ss_dssp SCCCGGGSBHHHHHHHHHHEEE---EEEEEEEEE
T ss_pred cccchhhhHHHHHHHHHHhcCC---CcEEEEEec
Confidence 221111 24889999999999 776666543
No 185
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.38 E-value=6e-13 Score=98.44 Aligned_cols=95 Identities=19% Similarity=0.279 Sum_probs=73.7
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcccC-CCc---cEEEec-
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQFI-PPS---DAFFFK- 80 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~~-~~~---D~v~~~- 80 (180)
.++.+|||+|||+|.++..+++. |+.+++++|+++ +++.+++ ..++++.++|+.+.. +.| |+|+++
T Consensus 122 ~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~~~f~~~D~IvsnP 200 (284)
T 1nv8_A 122 YGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNP 200 (284)
T ss_dssp HTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEECC
T ss_pred cCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcccccCCCCEEEEcC
Confidence 35679999999999999999999 899999999966 8888864 235999999997754 358 999997
Q ss_pred -----------cccccCChHH------HHHHHHHHH-HhhccCCCCcEEEE
Q 030291 81 -----------TVFHFFDDED------CLKLLKKCR-EAIASNGERGKVLI 113 (180)
Q Consensus 81 -----------~~l~~~~~~~------~~~~l~~~~-~~L~p~~~~G~~~~ 113 (180)
.+. |-+... -..+++++. +.|+| ||.+++
T Consensus 201 Pyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~p---gG~l~~ 247 (284)
T 1nv8_A 201 PYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTS---GKIVLM 247 (284)
T ss_dssp CCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCT---TCEEEE
T ss_pred CCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCC---CCEEEE
Confidence 122 222211 116799999 99999 788776
No 186
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.38 E-value=3.6e-12 Score=88.90 Aligned_cols=97 Identities=18% Similarity=0.260 Sum_probs=72.8
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCC---------CeEEEeeCchhhccCCCCCCeeEE-ecCCccc---------C--
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPG---------IKCTVLDLPHAVTDMPQTDNLKYI-EGDMFQF---------I-- 71 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~---------~~~~~~D~~~~~~~a~~~~~~~~~-~~d~~~~---------~-- 71 (180)
++++.+|||+|||+|.++..+++..+. .+++++|++++. ...++++. .+|+... .
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----PLEGATFLCPADVTDPRTSQRILEVLPG 95 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----CCTTCEEECSCCTTSHHHHHHHHHHSGG
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----cCCCCeEEEeccCCCHHHHHHHHHhcCC
Confidence 467889999999999999999999654 789999997732 13468888 8887541 1
Q ss_pred CCccEEEeccccccC----ChHH-----HHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 72 PPSDAFFFKTVFHFF----DDED-----CLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 72 ~~~D~v~~~~~l~~~----~~~~-----~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
..||+|++...++.. .+.. ...+++++.++|+| ||.+++..+
T Consensus 96 ~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~lv~~~~ 146 (196)
T 2nyu_A 96 RRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQP---GGTFLCKTW 146 (196)
T ss_dssp GCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEEC
T ss_pred CCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcC---CCEEEEEec
Confidence 269999997655432 2221 13789999999999 888888654
No 187
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.38 E-value=5.6e-13 Score=95.74 Aligned_cols=96 Identities=14% Similarity=0.272 Sum_probs=77.9
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCccc------CCCccEEE
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQF------IPPSDAFF 78 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~------~~~~D~v~ 78 (180)
..++.+|||||||+|..+..+++..|+.+++++|+++ +++.+++ ..++++.++|..+. ...||+|+
T Consensus 52 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 52 MAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF 131 (233)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence 4567899999999999999999998888999999965 8877764 25799999998652 24699999
Q ss_pred eccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 79 FKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 79 ~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
+....+ +. ..+++++.++|+| ||.+++.+.
T Consensus 132 ~~~~~~---~~--~~~l~~~~~~L~p---gG~lv~~~~ 161 (233)
T 2gpy_A 132 IDAAKG---QY--RRFFDMYSPMVRP---GGLILSDNV 161 (233)
T ss_dssp EEGGGS---CH--HHHHHHHGGGEEE---EEEEEEETT
T ss_pred ECCCHH---HH--HHHHHHHHHHcCC---CeEEEEEcC
Confidence 976653 33 3789999999999 888877644
No 188
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.37 E-value=3.2e-12 Score=89.22 Aligned_cols=102 Identities=15% Similarity=0.324 Sum_probs=74.2
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCCCCCeeEEecCCcccC-------------
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYIEGDMFQFI------------- 71 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~d~~~~~------------- 71 (180)
+.+.+. .++++.+|||+|||+|.++..+++. ..+++++|++++. ...++++.++|+.+..
T Consensus 16 i~~~~~-~~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~----~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 88 (191)
T 3dou_A 16 LLDRYR-VVRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME----EIAGVRFIRCDIFKETIFDDIDRALREEG 88 (191)
T ss_dssp HHHHHC-CSCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC----CCTTCEEEECCTTSSSHHHHHHHHHHHHT
T ss_pred HHHHcC-CCCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc----cCCCeEEEEccccCHHHHHHHHHHhhccc
Confidence 334443 2467899999999999999999887 7789999997632 2358999999986531
Q ss_pred -CCccEEEeccccccCC----h-----HHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 72 -PPSDAFFFKTVFHFFD----D-----EDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 72 -~~~D~v~~~~~l~~~~----~-----~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
+.||+|++........ + .....+++.+.++|+| ||.+++..+
T Consensus 89 ~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~Lkp---GG~lv~k~~ 140 (191)
T 3dou_A 89 IEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRN---GGNVLLKQF 140 (191)
T ss_dssp CSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEEE
T ss_pred CCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccC---CCEEEEEEc
Confidence 3799999965432211 1 1134678899999999 788776543
No 189
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.36 E-value=1.1e-12 Score=92.28 Aligned_cols=96 Identities=16% Similarity=0.242 Sum_probs=74.3
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------C--CCeeEEecCCccc-----CCC-ccEEEe
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------T--DNLKYIEGDMFQF-----IPP-SDAFFF 79 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~--~~~~~~~~d~~~~-----~~~-~D~v~~ 79 (180)
++.+|||+|||+|.++..++... ..+++++|+++ +++.+++ . .++++.++|+.+. ... ||+|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 56899999999999999877764 35899999966 8888874 2 5899999998652 236 999999
Q ss_pred ccccccCChHHHHHHHHHH--HHhhccCCCCcEEEEEEee
Q 030291 80 KTVFHFFDDEDCLKLLKKC--REAIASNGERGKVLIIDIV 117 (180)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~--~~~L~p~~~~G~~~~~~~~ 117 (180)
...++ ..+.. .+++.+ .++|+| ||.+++....
T Consensus 132 ~~~~~-~~~~~--~~l~~~~~~~~Lkp---gG~l~i~~~~ 165 (201)
T 2ift_A 132 DPPFH-FNLAE--QAISLLCENNWLKP---NALIYVETEK 165 (201)
T ss_dssp CCCSS-SCHHH--HHHHHHHHTTCEEE---EEEEEEEEES
T ss_pred CCCCC-CccHH--HHHHHHHhcCccCC---CcEEEEEECC
Confidence 87754 44444 678888 567999 7887776544
No 190
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.36 E-value=2.1e-13 Score=98.38 Aligned_cols=134 Identities=15% Similarity=0.150 Sum_probs=95.8
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----C--CCeeEEecCCccc--CCCccEEEeccccc
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----T--DNLKYIEGDMFQF--IPPSDAFFFKTVFH 84 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~--~~~~~~~~d~~~~--~~~~D~v~~~~~l~ 84 (180)
++.+|||+|||+|.++..+++. +.+++++|+++ +++.+++ . .++++.++|+.+. ...||+|+++..++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWG 155 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCS
T ss_pred CCCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcC
Confidence 6789999999999999999987 57899999966 8888874 1 4899999999663 33699999999999
Q ss_pred cCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEE
Q 030291 85 FFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHY 164 (180)
Q Consensus 85 ~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 164 (180)
+..+.. ..+.+++++|+| ||.+++.... .......... .+..+.+++..++...|.-.+
T Consensus 156 ~~~~~~--~~~~~~~~~L~p---gG~~i~~~~~-------------~~~~~~~~~l---p~~~~~~~~~~~l~~~g~~~i 214 (241)
T 3gdh_A 156 GPDYAT--AETFDIRTMMSP---DGFEIFRLSK-------------KITNNIVYFL---PRNADIDQVASLAGPGGQVEI 214 (241)
T ss_dssp SGGGGG--SSSBCTTTSCSS---CHHHHHHHHH-------------HHCSCEEEEE---ETTBCHHHHHHTTCTTCCEEE
T ss_pred Ccchhh--hHHHHHHhhcCC---cceeHHHHHH-------------hhCCceEEEC---CCCCCHHHHHHHhccCCCEEE
Confidence 887776 468889999999 8875442110 0011111111 134567778888877776655
Q ss_pred EEeecCC
Q 030291 165 KIAPIFG 171 (180)
Q Consensus 165 ~~~~~~~ 171 (180)
+.....+
T Consensus 215 ~~~~~~~ 221 (241)
T 3gdh_A 215 EQNFLNN 221 (241)
T ss_dssp EEEEETT
T ss_pred EehhhcC
Confidence 5444433
No 191
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.35 E-value=1e-12 Score=90.38 Aligned_cols=97 Identities=9% Similarity=0.061 Sum_probs=74.0
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCccc----CCCccEEEecc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQF----IPPSDAFFFKT 81 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~----~~~~D~v~~~~ 81 (180)
.++.+|||+|||+|.++..+++. +..+++++|+++ +++.+++ ..++++.++|+.+. ...||+|+++.
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 46789999999999999998887 456899999965 8887764 14799999998652 23699999987
Q ss_pred ccccCChHHHHHHHHHHH--HhhccCCCCcEEEEEEee
Q 030291 82 VFHFFDDEDCLKLLKKCR--EAIASNGERGKVLIIDIV 117 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~--~~L~p~~~~G~~~~~~~~ 117 (180)
.++. .....+++.+. ++|+| ||.+++....
T Consensus 109 ~~~~---~~~~~~~~~l~~~~~L~~---gG~l~~~~~~ 140 (177)
T 2esr_A 109 PYAK---ETIVATIEALAAKNLLSE---QVMVVCETDK 140 (177)
T ss_dssp SSHH---HHHHHHHHHHHHTTCEEE---EEEEEEEEET
T ss_pred CCCc---chHHHHHHHHHhCCCcCC---CcEEEEEECC
Confidence 6532 22236677777 99999 7877776543
No 192
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.35 E-value=1.9e-12 Score=93.89 Aligned_cols=96 Identities=16% Similarity=0.157 Sum_probs=76.1
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCC-CCeEEEeeCch-hhccCCC-------CCCeeEEecCCccc----------CCCc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFP-GIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQF----------IPPS 74 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~-~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~----------~~~~ 74 (180)
.++.+|||||||+|..+..+++..| +.+++++|+++ +++.+++ ..+++++.+|..+. ...|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 4678999999999999999999976 78999999965 8877764 25799999998541 2469
Q ss_pred cEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 75 DAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 75 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
|+|++.... .+ ...+++++.++|+| ||.+++.+..
T Consensus 158 D~V~~d~~~---~~--~~~~l~~~~~~Lkp---GG~lv~d~~~ 192 (247)
T 1sui_A 158 DFIFVDADK---DN--YLNYHKRLIDLVKV---GGVIGYDNTL 192 (247)
T ss_dssp SEEEECSCS---TT--HHHHHHHHHHHBCT---TCCEEEECTT
T ss_pred EEEEEcCch---HH--HHHHHHHHHHhCCC---CeEEEEecCC
Confidence 999986542 22 33789999999999 8887775543
No 193
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.35 E-value=9.3e-13 Score=94.03 Aligned_cols=92 Identities=10% Similarity=0.155 Sum_probs=72.5
Q ss_pred CeEEEeCCcccHHHHHHHHHCC-CCeEEEeeCch-hhccCCC-------C-CCeeEEecCCcc---cC--CCccEEEecc
Q 030291 17 RSMVDVGGGTGAFARIISEAFP-GIKCTVLDLPH-AVTDMPQ-------T-DNLKYIEGDMFQ---FI--PPSDAFFFKT 81 (180)
Q Consensus 17 ~~iLdiG~G~G~~~~~l~~~~~-~~~~~~~D~~~-~~~~a~~-------~-~~~~~~~~d~~~---~~--~~~D~v~~~~ 81 (180)
.+|||||||+|..+..+++..+ +.+++++|+++ +++.+++ . .++++.++|..+ .. ..||+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~ 137 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV 137 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC
Confidence 3999999999999999999864 78999999965 8887764 2 589999999855 22 4699999865
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
... + ...+++++.++|+| ||.+++.+.
T Consensus 138 ~~~---~--~~~~l~~~~~~Lkp---GG~lv~dn~ 164 (221)
T 3dr5_A 138 SPM---D--LKALVDAAWPLLRR---GGALVLADA 164 (221)
T ss_dssp CTT---T--HHHHHHHHHHHEEE---EEEEEETTT
T ss_pred cHH---H--HHHHHHHHHHHcCC---CcEEEEeCC
Confidence 432 2 23689999999999 777776443
No 194
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.34 E-value=1.8e-12 Score=89.67 Aligned_cols=97 Identities=11% Similarity=0.063 Sum_probs=73.7
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCccc-------CCCccEEE
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQF-------IPPSDAFF 78 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~-------~~~~D~v~ 78 (180)
.++.+|||+|||+|.++..+++. +..+++++|+++ +++.+++ ..++++.++|+.+. ...||+|+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 46789999999999999988774 357899999965 8888774 25799999998652 34699999
Q ss_pred eccccccCChHHHHHHHHHH--HHhhccCCCCcEEEEEEee
Q 030291 79 FKTVFHFFDDEDCLKLLKKC--REAIASNGERGKVLIIDIV 117 (180)
Q Consensus 79 ~~~~l~~~~~~~~~~~l~~~--~~~L~p~~~~G~~~~~~~~ 117 (180)
++..++. .+.. ..++.+ .++|+| ||.+++....
T Consensus 122 ~~~~~~~-~~~~--~~~~~l~~~~~L~~---gG~l~~~~~~ 156 (187)
T 2fhp_A 122 LDPPYAK-QEIV--SQLEKMLERQLLTN---EAVIVCETDK 156 (187)
T ss_dssp ECCCGGG-CCHH--HHHHHHHHTTCEEE---EEEEEEEEET
T ss_pred ECCCCCc-hhHH--HHHHHHHHhcccCC---CCEEEEEeCC
Confidence 9877543 2333 556666 788999 7877776543
No 195
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.34 E-value=1.8e-12 Score=97.75 Aligned_cols=97 Identities=14% Similarity=0.202 Sum_probs=73.9
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC-------CCCeeEEecCCcc-cC--CCccEEEeccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ-------TDNLKYIEGDMFQ-FI--PPSDAFFFKTV 82 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-------~~~~~~~~~d~~~-~~--~~~D~v~~~~~ 82 (180)
..++.+|||||||+|.++..+++. +..+++++|.+++++.+++ ..+++++++|+.+ +. ..||+|++..+
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWM 114 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCC
T ss_pred hcCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCc
Confidence 456789999999999999988887 3458999999877776653 3579999999965 23 36999999865
Q ss_pred cccCCh-HHHHHHHHHHHHhhccCCCCcEEEE
Q 030291 83 FHFFDD-EDCLKLLKKCREAIASNGERGKVLI 113 (180)
Q Consensus 83 l~~~~~-~~~~~~l~~~~~~L~p~~~~G~~~~ 113 (180)
.+++.. .....++..+.++|+| ||.++.
T Consensus 115 ~~~l~~~~~~~~~l~~~~~~Lkp---gG~li~ 143 (328)
T 1g6q_1 115 GYFLLYESMMDTVLYARDHYLVE---GGLIFP 143 (328)
T ss_dssp BTTBSTTCCHHHHHHHHHHHEEE---EEEEES
T ss_pred hhhcccHHHHHHHHHHHHhhcCC---CeEEEE
Confidence 444432 2233789999999999 777763
No 196
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.33 E-value=5.4e-12 Score=94.63 Aligned_cols=103 Identities=11% Similarity=0.118 Sum_probs=77.0
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCC-CCeEEEeeCch-hhccCCC------CCCeeEEecCCccc---CCCccEEEec-
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFP-GIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQF---IPPSDAFFFK- 80 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~-~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~---~~~~D~v~~~- 80 (180)
..++.+|||+|||+|..+..+++..+ ..+++++|+++ +++.+++ ..++++.++|..+. ...||+|++.
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~ 195 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDA 195 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEEC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeC
Confidence 46778999999999999999999864 57999999966 7877764 34799999998652 2369999983
Q ss_pred -----cccccCChH--------------HHHHHHHHHHHhhccCCCCcEEEEEEeee
Q 030291 81 -----TVFHFFDDE--------------DCLKLLKKCREAIASNGERGKVLIIDIVI 118 (180)
Q Consensus 81 -----~~l~~~~~~--------------~~~~~l~~~~~~L~p~~~~G~~~~~~~~~ 118 (180)
+++++.++. .+..+|+++.++||| ||.++++....
T Consensus 196 Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~Lkp---GG~lv~stcs~ 249 (315)
T 1ixk_A 196 PCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKP---GGILVYSTCSL 249 (315)
T ss_dssp CTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEESCC
T ss_pred CCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCC---CCEEEEEeCCC
Confidence 334433321 124889999999999 88888876543
No 197
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.33 E-value=2.4e-12 Score=91.90 Aligned_cols=95 Identities=8% Similarity=0.062 Sum_probs=78.1
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCcccC-C-CccEEEecccccc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQFI-P-PSDAFFFKTVFHF 85 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~~~-~-~~D~v~~~~~l~~ 85 (180)
.++.+|||||||+|.++..+. +..+++++|++. +++.++. ..+..+.+.|..... + .||+|++.-++|+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk~lh~ 180 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLPL 180 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCHHH
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHHHHHH
Confidence 568899999999999999887 788999999966 8888875 567889999997633 2 6999999999999
Q ss_pred CChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 86 FDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 86 ~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
+++.+....+ ++.+.|++ ++++++-+
T Consensus 181 LE~q~~~~~~-~ll~aL~~----~~vvVsfP 206 (253)
T 3frh_A 181 LEREQAGSAM-ALLQSLNT----PRMAVSFP 206 (253)
T ss_dssp HHHHSTTHHH-HHHHHCBC----SEEEEEEE
T ss_pred hhhhchhhHH-HHHHHhcC----CCEEEEcC
Confidence 9887766666 89999999 55555443
No 198
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.32 E-value=2.4e-12 Score=93.28 Aligned_cols=93 Identities=20% Similarity=0.314 Sum_probs=72.0
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC--------------CCCeeEEecCCcccC------C
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ--------------TDNLKYIEGDMFQFI------P 72 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~--------------~~~~~~~~~d~~~~~------~ 72 (180)
+++.+|||||||+|.++..+++.+|...++++|+++ +++.+++ ..++++.++|+.+.+ .
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 367899999999999999999999888999999966 7766532 258999999986522 2
Q ss_pred CccEEEeccccccCChHHH-----------HHHHHHHHHhhccCCCCcEEEEE
Q 030291 73 PSDAFFFKTVFHFFDDEDC-----------LKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 73 ~~D~v~~~~~l~~~~~~~~-----------~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
.+|.|+... +++.. ..+++++.++|+| ||.+++.
T Consensus 128 ~~d~v~~~~-----p~p~~k~~~~~~r~~~~~~l~~~~~~Lkp---gG~l~~~ 172 (246)
T 2vdv_E 128 QLSKMFFCF-----PDPHFKQRKHKARIITNTLLSEYAYVLKE---GGVVYTI 172 (246)
T ss_dssp CEEEEEEES-----CCCC------CSSCCCHHHHHHHHHHEEE---EEEEEEE
T ss_pred ccCEEEEEC-----CCcccccchhHHhhccHHHHHHHHHHcCC---CCEEEEE
Confidence 588887532 33210 3789999999999 8888774
No 199
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.31 E-value=1.4e-12 Score=92.12 Aligned_cols=95 Identities=15% Similarity=0.245 Sum_probs=74.1
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCC-CCeEEEeeCch-hhccCCC-------CCCeeEEecCCccc---CCCccEEEecc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFP-GIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQF---IPPSDAFFFKT 81 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~-~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~---~~~~D~v~~~~ 81 (180)
.++.+|||||||+|..+..+++..+ +.+++++|+++ +++.+++ ..++++.++|..+. .+.||+|++..
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 134 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRDIDILFMDC 134 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCSEEEEEEET
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCCCCEEEEcC
Confidence 4678999999999999999999876 78999999965 8887764 24799999998552 11299999864
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
.. .+. ..+++++.++|+| ||.+++.+.
T Consensus 135 ~~---~~~--~~~l~~~~~~Lkp---gG~lv~~~~ 161 (210)
T 3c3p_A 135 DV---FNG--ADVLERMNRCLAK---NALLIAVNA 161 (210)
T ss_dssp TT---SCH--HHHHHHHGGGEEE---EEEEEEESS
T ss_pred Ch---hhh--HHHHHHHHHhcCC---CeEEEEECc
Confidence 32 223 3789999999999 777776543
No 200
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.30 E-value=3.1e-12 Score=94.15 Aligned_cols=100 Identities=13% Similarity=0.178 Sum_probs=78.9
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHH-CCCCeEEEeeCch-hhccCCC---------CCCeeEEecCCccc-C-
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEA-FPGIKCTVLDLPH-AVTDMPQ---------TDNLKYIEGDMFQF-I- 71 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~-~~~~~~~~~D~~~-~~~~a~~---------~~~~~~~~~d~~~~-~- 71 (180)
+++.+. +.++.+|||+|||+|.++..+++. .|..+++++|+++ +++.+++ ..++++.++|+.+. .
T Consensus 91 i~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~ 168 (280)
T 1i9g_A 91 IVHEGD--IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELP 168 (280)
T ss_dssp HHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCC
T ss_pred HHHHcC--CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCC
Confidence 344455 677889999999999999999986 5678999999965 7777653 24799999999653 2
Q ss_pred -CCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 72 -PPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 72 -~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
..||+|++ +.+++. .+++++.++|+| ||.+++...
T Consensus 169 ~~~~D~v~~-----~~~~~~--~~l~~~~~~L~p---gG~l~~~~~ 204 (280)
T 1i9g_A 169 DGSVDRAVL-----DMLAPW--EVLDAVSRLLVA---GGVLMVYVA 204 (280)
T ss_dssp TTCEEEEEE-----ESSCGG--GGHHHHHHHEEE---EEEEEEEES
T ss_pred CCceeEEEE-----CCcCHH--HHHHHHHHhCCC---CCEEEEEeC
Confidence 35999998 344555 779999999999 888888764
No 201
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.30 E-value=1.3e-11 Score=88.14 Aligned_cols=93 Identities=19% Similarity=0.185 Sum_probs=75.4
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHC-----CCCeEEEeeCch-hhccCCC-----------CCCeeEEecCCcccC----
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAF-----PGIKCTVLDLPH-AVTDMPQ-----------TDNLKYIEGDMFQFI---- 71 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~-----~~~~~~~~D~~~-~~~~a~~-----------~~~~~~~~~d~~~~~---- 71 (180)
++++.+|||||||+|.++..+++.. |..+++++|+++ +++.+++ ..++++.++|..+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 5678899999999999999999886 457999999965 7777764 247999999986533
Q ss_pred ---CCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 72 ---PPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 72 ---~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
..||+|++...++++ ++++.+.|+| ||.+++...
T Consensus 158 ~~~~~fD~I~~~~~~~~~--------~~~~~~~Lkp---gG~lv~~~~ 194 (227)
T 2pbf_A 158 KELGLFDAIHVGASASEL--------PEILVDLLAE---NGKLIIPIE 194 (227)
T ss_dssp HHHCCEEEEEECSBBSSC--------CHHHHHHEEE---EEEEEEEEE
T ss_pred ccCCCcCEEEECCchHHH--------HHHHHHhcCC---CcEEEEEEc
Confidence 369999999988865 4667899999 888887654
No 202
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.30 E-value=1.5e-12 Score=93.10 Aligned_cols=92 Identities=16% Similarity=0.197 Sum_probs=74.0
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCC------CCeEEEeeCch-hhccCCC-----------CCCeeEEecCCcccC---
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFP------GIKCTVLDLPH-AVTDMPQ-----------TDNLKYIEGDMFQFI--- 71 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~------~~~~~~~D~~~-~~~~a~~-----------~~~~~~~~~d~~~~~--- 71 (180)
+.++.+|||||||+|.++..+++..+ ..+++++|+++ +++.+++ ..++++.++|..+..
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPN 161 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcC
Confidence 56778999999999999999988653 25899999965 8877764 247999999986633
Q ss_pred CCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 72 PPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 72 ~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
..||+|++...++++. +++.+.|+| ||.+++.-
T Consensus 162 ~~fD~I~~~~~~~~~~--------~~~~~~Lkp---gG~lvi~~ 194 (227)
T 1r18_A 162 APYNAIHVGAAAPDTP--------TELINQLAS---GGRLIVPV 194 (227)
T ss_dssp CSEEEEEECSCBSSCC--------HHHHHTEEE---EEEEEEEE
T ss_pred CCccEEEECCchHHHH--------HHHHHHhcC---CCEEEEEE
Confidence 3699999999998765 567889999 78877754
No 203
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.29 E-value=8.4e-12 Score=90.14 Aligned_cols=92 Identities=16% Similarity=0.228 Sum_probs=75.7
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcccC-C--CccEEEecc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQFI-P--PSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~~-~--~~D~v~~~~ 81 (180)
+.++.+|||+|||+|.++..+++. ..+++++|+++ +++.+++ ..++++...|+.+.. + .||+|++.
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~- 165 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVD- 165 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEEC-
T ss_pred CCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEEC-
Confidence 467889999999999999999988 77899999965 8777764 268999999997644 3 59999983
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
.+++. .+++++.++|+| ||.+++...
T Consensus 166 ----~~~~~--~~l~~~~~~L~~---gG~l~~~~~ 191 (248)
T 2yvl_A 166 ----VREPW--HYLEKVHKSLME---GAPVGFLLP 191 (248)
T ss_dssp ----SSCGG--GGHHHHHHHBCT---TCEEEEEES
T ss_pred ----CcCHH--HHHHHHHHHcCC---CCEEEEEeC
Confidence 34555 679999999999 899998764
No 204
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.29 E-value=3.1e-12 Score=96.54 Aligned_cols=98 Identities=15% Similarity=0.161 Sum_probs=74.9
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----------CCCeeEEecCCccc-----CCCccEE
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----------TDNLKYIEGDMFQF-----IPPSDAF 77 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----------~~~~~~~~~d~~~~-----~~~~D~v 77 (180)
+.+.+|||||||+|..+..+++..+..+++++|+++ +++.+++ ..+++++++|..+. ...||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 567899999999999999999887778999999966 8777764 25899999998542 2369999
Q ss_pred Eecccc--ccCChHHHHHHHHHHHHhhccCCCCcEEEEE
Q 030291 78 FFKTVF--HFFDDEDCLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 78 ~~~~~l--~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
++.... +...+.....++++++++|+| ||.+++.
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~ 234 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRP---GGVVCTQ 234 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEE---EEEEEEE
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCC---CcEEEEe
Confidence 986542 111111134889999999999 7777664
No 205
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.29 E-value=4e-11 Score=91.93 Aligned_cols=96 Identities=9% Similarity=0.058 Sum_probs=76.5
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCcccCC-----CccEEEeccc
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQFIP-----PSDAFFFKTV 82 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~~~-----~~D~v~~~~~ 82 (180)
++.+|||+| |+|.++..++...+..+++++|+++ +++.+++ ..+++++++|+.+.++ .||+|+++..
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 468999999 9999999999887778999999965 8888875 2389999999976332 5999999876
Q ss_pred cccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 83 FHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 83 l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
++... ...+++++.++|+| ||.+++....
T Consensus 251 ~~~~~---~~~~l~~~~~~Lkp---gG~~~~~~~~ 279 (373)
T 2qm3_A 251 ETLEA---IRAFVGRGIATLKG---PRCAGYFGIT 279 (373)
T ss_dssp SSHHH---HHHHHHHHHHTBCS---TTCEEEEEEC
T ss_pred CchHH---HHHHHHHHHHHccc---CCeEEEEEEe
Confidence 55432 35889999999999 8866555543
No 206
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.28 E-value=1e-11 Score=87.33 Aligned_cols=96 Identities=13% Similarity=0.217 Sum_probs=72.9
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCccc----CCCccEEEecccc
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQF----IPPSDAFFFKTVF 83 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~----~~~~D~v~~~~~l 83 (180)
++.+|||+|||+|.++..++... ..+++++|+++ +++.+++ ..++++.++|+.+. ...||+|++...+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 56899999999999999877774 34899999966 8888874 24899999998652 2369999998774
Q ss_pred ccCChHHHHHHHHHHHH--hhccCCCCcEEEEEEee
Q 030291 84 HFFDDEDCLKLLKKCRE--AIASNGERGKVLIIDIV 117 (180)
Q Consensus 84 ~~~~~~~~~~~l~~~~~--~L~p~~~~G~~~~~~~~ 117 (180)
+ ..... .+++.+.+ +|+| ||.+++....
T Consensus 133 ~-~~~~~--~~l~~l~~~~~L~p---gG~l~i~~~~ 162 (202)
T 2fpo_A 133 R-RGLLE--ETINLLEDNGWLAD---EALIYVESEV 162 (202)
T ss_dssp S-TTTHH--HHHHHHHHTTCEEE---EEEEEEEEEG
T ss_pred C-CCcHH--HHHHHHHhcCccCC---CcEEEEEECC
Confidence 4 33333 67888876 4999 7777766543
No 207
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.28 E-value=3.1e-12 Score=92.19 Aligned_cols=97 Identities=13% Similarity=0.192 Sum_probs=76.0
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCC-CCeEEEeeCch-hhccCCC-------CCCeeEEecCCccc-------------
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFP-GIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQF------------- 70 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~-~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~------------- 70 (180)
..++.+|||||||+|..+..+++..+ ..+++++|+++ +++.+++ ..++++.++|..+.
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 137 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSW 137 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGG
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccc
Confidence 45678999999999999999999976 68999999965 7777764 24599999998541
Q ss_pred ------C-CCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 71 ------I-PPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 71 ------~-~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
. ..||+|++..... ....+++++.++|+| ||.+++.+..
T Consensus 138 ~~~f~~~~~~fD~I~~~~~~~-----~~~~~l~~~~~~L~p---gG~lv~~~~~ 183 (239)
T 2hnk_A 138 ASDFAFGPSSIDLFFLDADKE-----NYPNYYPLILKLLKP---GGLLIADNVL 183 (239)
T ss_dssp GTTTCCSTTCEEEEEECSCGG-----GHHHHHHHHHHHEEE---EEEEEEECSS
T ss_pred cccccCCCCCcCEEEEeCCHH-----HHHHHHHHHHHHcCC---CeEEEEEccc
Confidence 1 5699999875432 233789999999999 7877775543
No 208
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.28 E-value=4.7e-12 Score=93.62 Aligned_cols=98 Identities=13% Similarity=0.168 Sum_probs=75.5
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----------CCCeeEEecCCccc----CCCccEEE
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----------TDNLKYIEGDMFQF----IPPSDAFF 78 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----------~~~~~~~~~d~~~~----~~~~D~v~ 78 (180)
+++.+|||||||+|..+..+++..+..+++++|+++ +++.+++ .+++++..+|..+. ...||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 467899999999999999999887778999999965 7776653 36899999998652 34699999
Q ss_pred eccccccCChHHH--HHHHHHHHHhhccCCCCcEEEEE
Q 030291 79 FKTVFHFFDDEDC--LKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 79 ~~~~l~~~~~~~~--~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
+....+..+.... .++++.++++|+| ||.+++.
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~p---gG~lv~~ 191 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKP---NGYCVAQ 191 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEE---EEEEEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCC---CcEEEEE
Confidence 9654333222221 4889999999999 7777664
No 209
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.28 E-value=5.1e-12 Score=93.33 Aligned_cols=97 Identities=13% Similarity=0.178 Sum_probs=72.2
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----------------CCCeeEEecCCccc---CCC
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----------------TDNLKYIEGDMFQF---IPP 73 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----------------~~~~~~~~~d~~~~---~~~ 73 (180)
+.+.+|||||||+|.++..+++. +..+++++|+++ +++.+++ .++++++.+|..+. ...
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 46789999999999999999988 778999999965 7665542 35789999998542 346
Q ss_pred ccEEEeccccccCChHH--HHHHHHHHHHhhccCCCCcEEEEE
Q 030291 74 SDAFFFKTVFHFFDDED--CLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 74 ~D~v~~~~~l~~~~~~~--~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
||+|++....+..+... ..+++++++++|+| ||.+++.
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~p---gG~lv~~ 192 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNN---PGIYVTQ 192 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEE---EEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCC---CcEEEEE
Confidence 99999865532222111 24789999999999 7777664
No 210
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.28 E-value=4.2e-12 Score=90.64 Aligned_cols=93 Identities=16% Similarity=0.172 Sum_probs=74.2
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHC-CCCeEEEeeCch-hhccCCC-----------CCCeeEEecCCccc---CCCccE
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAF-PGIKCTVLDLPH-AVTDMPQ-----------TDNLKYIEGDMFQF---IPPSDA 76 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~~~~D~~~-~~~~a~~-----------~~~~~~~~~d~~~~---~~~~D~ 76 (180)
.+++.+|||+|||+|..+..+++.. +..+++++|+++ +++.+++ ..++++.++|.... ...||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 4678899999999999999998874 557999999965 8777763 24799999998542 236999
Q ss_pred EEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 77 FFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 77 v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
|++...++++ ++++.+.|+| ||.+++...
T Consensus 155 i~~~~~~~~~--------~~~~~~~Lkp---gG~lv~~~~ 183 (226)
T 1i1n_A 155 IHVGAAAPVV--------PQALIDQLKP---GGRLILPVG 183 (226)
T ss_dssp EEECSBBSSC--------CHHHHHTEEE---EEEEEEEES
T ss_pred EEECCchHHH--------HHHHHHhcCC---CcEEEEEEe
Confidence 9999888755 4568899999 888887653
No 211
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.27 E-value=1.7e-11 Score=91.44 Aligned_cols=96 Identities=13% Similarity=0.133 Sum_probs=69.4
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeC----ch-hhccCCC----CCCeeEEec-CCcc-cCCCccEEEecc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDL----PH-AVTDMPQ----TDNLKYIEG-DMFQ-FIPPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~----~~-~~~~a~~----~~~~~~~~~-d~~~-~~~~~D~v~~~~ 81 (180)
++++.+|||||||+|.++..+++. .+++++|+ +. +++.... ..++++.++ |+.. +...||+|++..
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~sd~ 156 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLLCDI 156 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEEECC
Confidence 566789999999999999998887 36999998 33 4433321 257899998 8865 334699999977
Q ss_pred ccc---cCChHH-HHHHHHHHHHhhccCCCCcEEEEE
Q 030291 82 VFH---FFDDED-CLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 82 ~l~---~~~~~~-~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
+++ +..+.. ...+|..+.++|+| ||.+++.
T Consensus 157 ~~~~g~~~~d~~~~l~~L~~~~~~Lkp---GG~~v~k 190 (305)
T 2p41_A 157 GESSPNPTVEAGRTLRVLNLVENWLSN---NTQFCVK 190 (305)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHCCT---TCEEEEE
T ss_pred ccccCcchhhHHHHHHHHHHHHHHhCC---CCEEEEE
Confidence 653 222222 12578999999999 8877663
No 212
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.27 E-value=1.1e-11 Score=90.50 Aligned_cols=89 Identities=10% Similarity=0.098 Sum_probs=72.6
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----------CCCeeEEecCCcccCCCccEEEeccc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----------TDNLKYIEGDMFQFIPPSDAFFFKTV 82 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----------~~~~~~~~~d~~~~~~~~D~v~~~~~ 82 (180)
+.+.+|||||||+|..+..+++. + .+++++|+++ +++.+++ .+++++..+|..+....||+|++..
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d~- 147 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCLQ- 147 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEESS-
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEECC-
Confidence 45689999999999999999888 6 8999999965 8888875 2478999999865446799999863
Q ss_pred cccCChHHHHHHHHHHHHhhccCCCCcEEEEE
Q 030291 83 FHFFDDEDCLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 83 l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
.++. .+++.++++|+| ||.+++.
T Consensus 148 ----~dp~--~~~~~~~~~L~p---gG~lv~~ 170 (262)
T 2cmg_A 148 ----EPDI--HRIDGLKRMLKE---DGVFISV 170 (262)
T ss_dssp ----CCCH--HHHHHHHTTEEE---EEEEEEE
T ss_pred ----CChH--HHHHHHHHhcCC---CcEEEEE
Confidence 3444 589999999999 7777664
No 213
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.27 E-value=1.3e-11 Score=90.74 Aligned_cols=97 Identities=19% Similarity=0.138 Sum_probs=78.5
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCccc--CCCccEEEecccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQF--IPPSDAFFFKTVF 83 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~--~~~~D~v~~~~~l 83 (180)
+.++.+|||+|||+|.++..+++..+..+++++|+++ +++.+++ ..++.+.++|+.+. ...||+|++....
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVH 196 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCCS
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCcc
Confidence 4577899999999999999999997777999999965 8888764 35789999999664 2369999987653
Q ss_pred ccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeee
Q 030291 84 HFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVI 118 (180)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~ 118 (180)
+.. +++.++.+.|+| ||.++++....
T Consensus 197 ----~~~--~~l~~~~~~Lkp---gG~l~~s~~~~ 222 (272)
T 3a27_A 197 ----KTH--KFLDKTFEFLKD---RGVIHYHETVA 222 (272)
T ss_dssp ----SGG--GGHHHHHHHEEE---EEEEEEEEEEE
T ss_pred ----cHH--HHHHHHHHHcCC---CCEEEEEEcCc
Confidence 233 679999999999 88888876654
No 214
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.27 E-value=8.3e-12 Score=93.58 Aligned_cols=99 Identities=13% Similarity=0.118 Sum_probs=76.7
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----------CCCeeEEecCCccc----CCCccEE
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----------TDNLKYIEGDMFQF----IPPSDAF 77 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----------~~~~~~~~~d~~~~----~~~~D~v 77 (180)
+.+.+|||||||+|..+..+++..+..+++++|+++ +++.+++ ..+++++.+|..+. ...||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 467899999999999999999887788999999965 7776653 35799999998652 3469999
Q ss_pred Eecccccc---CChHH--HHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 78 FFKTVFHF---FDDED--CLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 78 ~~~~~l~~---~~~~~--~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
++....+. -+... ..+++++++++|+| ||.+++..
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~~ 195 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNP---GGVMGMQT 195 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEE---EEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCC---CcEEEEEc
Confidence 99766543 11111 24889999999999 78777754
No 215
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.27 E-value=1.1e-11 Score=89.30 Aligned_cols=95 Identities=18% Similarity=0.174 Sum_probs=74.3
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCC-CCeEEEeeCch-hhccCCC-------CCCeeEEecCCccc----------CCC
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFP-GIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQF----------IPP 73 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~-~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~----------~~~ 73 (180)
..++.+|||||||+|..+..+++..| +.+++++|+++ +++.+++ ..++++.++|..+. ...
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 34678999999999999999999976 78999999965 7777764 24799999998641 246
Q ss_pred ccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 74 SDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 74 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
||+|++... ......+++++.+.|+| ||.+++.+
T Consensus 148 fD~I~~d~~-----~~~~~~~l~~~~~~L~p---GG~lv~d~ 181 (237)
T 3c3y_A 148 YDFGFVDAD-----KPNYIKYHERLMKLVKV---GGIVAYDN 181 (237)
T ss_dssp EEEEEECSC-----GGGHHHHHHHHHHHEEE---EEEEEEEC
T ss_pred cCEEEECCc-----hHHHHHHHHHHHHhcCC---CeEEEEec
Confidence 999998643 22344889999999999 67666544
No 216
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.27 E-value=4.1e-12 Score=91.28 Aligned_cols=96 Identities=14% Similarity=0.194 Sum_probs=75.1
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCC-CCeEEEeeCch-hhccCCC-------CCCeeEEecCCcc---cC------CCcc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFP-GIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQ---FI------PPSD 75 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~-~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~---~~------~~~D 75 (180)
.++.+|||||||+|..+..+++..+ +.+++++|+++ +++.+++ ..++++.++|..+ .. +.||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 4678999999999999999999876 67999999965 7777764 2479999999743 11 5699
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 76 AFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 76 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
+|++.... .....+++++.++|+| ||.+++.+..
T Consensus 151 ~V~~d~~~-----~~~~~~l~~~~~~Lkp---gG~lv~~~~~ 184 (232)
T 3cbg_A 151 LIFIDADK-----RNYPRYYEIGLNLLRR---GGLMVIDNVL 184 (232)
T ss_dssp EEEECSCG-----GGHHHHHHHHHHTEEE---EEEEEEECTT
T ss_pred EEEECCCH-----HHHHHHHHHHHHHcCC---CeEEEEeCCC
Confidence 99986542 2334789999999999 7777775543
No 217
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.27 E-value=5.2e-12 Score=94.60 Aligned_cols=98 Identities=17% Similarity=0.205 Sum_probs=71.4
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----------CCCeeEEecCCccc----CCCccEEE
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----------TDNLKYIEGDMFQF----IPPSDAFF 78 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----------~~~~~~~~~d~~~~----~~~~D~v~ 78 (180)
+.+.+|||||||+|..+..+++..+..+++++|+++ +++.+++ .++++++.+|..+. ...||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 457899999999999999999887788999999965 7776653 25799999998652 34699999
Q ss_pred eccccccCChHHH--HHHHHHHHHhhccCCCCcEEEEE
Q 030291 79 FKTVFHFFDDEDC--LKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 79 ~~~~l~~~~~~~~--~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
+...-+..+.... .+++++++++|+| ||.+++.
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~Lkp---gG~lv~~ 221 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKE---DGILSSQ 221 (314)
T ss_dssp ECCC-------------HHHHHHHHEEE---EEEEEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCC---CeEEEEE
Confidence 8654322122211 5889999999999 6766664
No 218
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.27 E-value=5.3e-12 Score=90.24 Aligned_cols=97 Identities=12% Similarity=0.203 Sum_probs=75.7
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCC-CCeEEEeeCch-hhccCCC-------CCCeeEEecCCccc---C------CCc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFP-GIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQF---I------PPS 74 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~-~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~---~------~~~ 74 (180)
..++.+|||||||+|..+..+++..+ ..+++++|+++ +++.+++ ..++++.++|..+. . ..|
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 35678999999999999999998876 78999999955 7777764 26899999998542 1 569
Q ss_pred cEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 75 DAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 75 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
|+|++... ......+++++.++|+| ||.+++.+..
T Consensus 147 D~v~~d~~-----~~~~~~~l~~~~~~L~p---gG~lv~~~~~ 181 (229)
T 2avd_A 147 DVAVVDAD-----KENCSAYYERCLQLLRP---GGILAVLRVL 181 (229)
T ss_dssp EEEEECSC-----STTHHHHHHHHHHHEEE---EEEEEEECCS
T ss_pred cEEEECCC-----HHHHHHHHHHHHHHcCC---CeEEEEECCC
Confidence 99998654 12233789999999999 7777775543
No 219
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.26 E-value=1.5e-11 Score=94.00 Aligned_cols=95 Identities=17% Similarity=0.170 Sum_probs=71.2
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC-------CCCeeEEecCCcc-cCC-CccEEEecccccc
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ-------TDNLKYIEGDMFQ-FIP-PSDAFFFKTVFHF 85 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-------~~~~~~~~~d~~~-~~~-~~D~v~~~~~l~~ 85 (180)
++++|||||||+|.++...++.. -.+++++|.++++..|++ ..+|+++++++.+ .+| .+|+|++..+-+.
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~~ 161 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAG-ARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYG 161 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBTT
T ss_pred CCCEEEEeCCCccHHHHHHHHhC-CCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeeccccc
Confidence 57789999999999998777764 347999999877776664 5789999999965 344 6999998554333
Q ss_pred CChH-HHHHHHHHHHHhhccCCCCcEEEE
Q 030291 86 FDDE-DCLKLLKKCREAIASNGERGKVLI 113 (180)
Q Consensus 86 ~~~~-~~~~~l~~~~~~L~p~~~~G~~~~ 113 (180)
+..+ ....++....+.|+| ||.++-
T Consensus 162 l~~e~~l~~~l~a~~r~Lkp---~G~~iP 187 (376)
T 4hc4_A 162 LLHESMLSSVLHARTKWLKE---GGLLLP 187 (376)
T ss_dssp BTTTCSHHHHHHHHHHHEEE---EEEEES
T ss_pred ccccchhhhHHHHHHhhCCC---CceECC
Confidence 3332 344778888899999 666654
No 220
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.26 E-value=1e-11 Score=94.62 Aligned_cols=100 Identities=14% Similarity=0.176 Sum_probs=77.5
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHC-CCCeEEEeeCch-hhccCCC------CCCeeEEecCCccc---CCCccEEEecc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAF-PGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQF---IPPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~---~~~~D~v~~~~ 81 (180)
++++.+|||+|||+|.++..++... +..+++++|+++ +++.+++ ..++++.++|+.+. .+.||+|+++-
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~np 280 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANP 280 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECC
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECC
Confidence 5678899999999999999999986 778999999965 8888874 13799999999662 23589999965
Q ss_pred ccccCCh--H----HHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 82 VFHFFDD--E----DCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 82 ~l~~~~~--~----~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
....-.. . ....+++++.++|+| ||.+++..
T Consensus 281 Pyg~r~~~~~~~~~~~~~~~~~~~~~Lkp---gG~l~i~t 317 (354)
T 3tma_A 281 PHGLRLGRKEGLFHLYWDFLRGALALLPP---GGRVALLT 317 (354)
T ss_dssp CSCC----CHHHHHHHHHHHHHHHHTSCT---TCEEEEEE
T ss_pred CCcCccCCcccHHHHHHHHHHHHHHhcCC---CcEEEEEe
Confidence 4332111 1 124789999999999 89988864
No 221
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.26 E-value=6.8e-12 Score=94.30 Aligned_cols=98 Identities=13% Similarity=0.167 Sum_probs=73.9
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----------CCCeeEEecCCccc----CCCccEEE
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----------TDNLKYIEGDMFQF----IPPSDAFF 78 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----------~~~~~~~~~d~~~~----~~~~D~v~ 78 (180)
+++.+|||||||+|..+..+++..+..+++++|+++ +++.+++ ..++++.++|..+. ...||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 456899999999999999999877788999999965 7776653 35799999998552 24699999
Q ss_pred eccccccCChHH--HHHHHHHHHHhhccCCCCcEEEEE
Q 030291 79 FKTVFHFFDDED--CLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 79 ~~~~l~~~~~~~--~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
+...-..-+... ..+++++++++|+| ||.+++.
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~ 229 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKP---NGYCVAQ 229 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEE---EEEEEEE
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCC---CcEEEEE
Confidence 865321111111 14889999999999 7777664
No 222
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.25 E-value=6.3e-12 Score=93.79 Aligned_cols=99 Identities=15% Similarity=0.159 Sum_probs=73.3
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----------CCCeeEEecCCccc----CCCccEEE
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----------TDNLKYIEGDMFQF----IPPSDAFF 78 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----------~~~~~~~~~d~~~~----~~~~D~v~ 78 (180)
+++.+|||||||+|..+..+++..+..+++++|+++ +++.+++ ..+++++.+|..+. ...||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 467899999999999999999887778999999965 7776653 36899999998552 24699999
Q ss_pred eccccccCChH--HHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 79 FKTVFHFFDDE--DCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 79 ~~~~l~~~~~~--~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
+....+..+.. ...+++++++++|+| ||.+++..
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~~ 209 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKE---DGVLCCQG 209 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEE---EEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCC---CeEEEEec
Confidence 86543322211 123789999999999 77776654
No 223
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.24 E-value=7.1e-12 Score=92.26 Aligned_cols=98 Identities=15% Similarity=0.117 Sum_probs=74.1
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----------CCCeeEEecCCccc----CCCccEEE
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----------TDNLKYIEGDMFQF----IPPSDAFF 78 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----------~~~~~~~~~d~~~~----~~~~D~v~ 78 (180)
+.+.+|||||||+|.++..+++..+..+++++|+++ +++.+++ .++++++.+|..+. ...||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 457899999999999999998876678999999965 7776653 36899999998652 23699999
Q ss_pred eccccccCChH--HHHHHHHHHHHhhccCCCCcEEEEE
Q 030291 79 FKTVFHFFDDE--DCLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 79 ~~~~l~~~~~~--~~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
+....+..+.. ...+++++++++|+| ||.+++.
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~p---gG~lv~~ 188 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKE---DGIFVAQ 188 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEE---EEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCC---CcEEEEE
Confidence 96544322211 013789999999999 6766664
No 224
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.23 E-value=3e-12 Score=94.78 Aligned_cols=77 Identities=18% Similarity=0.340 Sum_probs=61.2
Q ss_pred ccccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcc-cCCC
Q 030291 3 TLLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQ-FIPP 73 (180)
Q Consensus 3 ~~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~-~~~~ 73 (180)
+.+++.+. ..++.+|||||||+|.++..+++. +.+++++|+++ +++.+++ ..+++++++|+.+ +.+.
T Consensus 18 ~~i~~~~~--~~~~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~~ 93 (285)
T 1zq9_A 18 NSIIDKAA--LRPTDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPF 93 (285)
T ss_dssp HHHHHHTC--CCTTCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCCC
T ss_pred HHHHHhcC--CCCCCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccchh
Confidence 34555555 677889999999999999999998 45899999965 8777654 1579999999976 5568
Q ss_pred ccEEEecccc
Q 030291 74 SDAFFFKTVF 83 (180)
Q Consensus 74 ~D~v~~~~~l 83 (180)
||+|+++...
T Consensus 94 fD~vv~nlpy 103 (285)
T 1zq9_A 94 FDTCVANLPY 103 (285)
T ss_dssp CSEEEEECCG
T ss_pred hcEEEEecCc
Confidence 9999996554
No 225
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.22 E-value=2.3e-11 Score=85.27 Aligned_cols=88 Identities=18% Similarity=0.232 Sum_probs=65.2
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-CCCeeEEecCCcccCCCccEEEeccccccCChHHH
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-TDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDDEDC 91 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~~~~ 91 (180)
.++.+|||+|||+|.++..+++. +..+++++|+++ +++.+++ ..++++.++|+.+....||+|+++..++++.+...
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~D~v~~~~p~~~~~~~~~ 128 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEISGKYDTWIMNPPFGSVVKHSD 128 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCCCCEEEEEECCCC-------C
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCCCCeeEEEECCCchhccCchh
Confidence 46789999999999999999887 344799999965 8888875 23899999999664357999999999998876433
Q ss_pred HHHHHHHHHhh
Q 030291 92 LKLLKKCREAI 102 (180)
Q Consensus 92 ~~~l~~~~~~L 102 (180)
..+++++.+.+
T Consensus 129 ~~~l~~~~~~~ 139 (200)
T 1ne2_A 129 RAFIDKAFETS 139 (200)
T ss_dssp HHHHHHHHHHE
T ss_pred HHHHHHHHHhc
Confidence 46677777775
No 226
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.21 E-value=1.8e-10 Score=85.06 Aligned_cols=92 Identities=15% Similarity=0.118 Sum_probs=66.1
Q ss_pred ccCCCeEEEeCCcc------cHHHHHHHHHCC-CCeEEEeeCchhhccCCCCCCeeE-EecCCccc-C-CCccEEEeccc
Q 030291 13 FQGLRSMVDVGGGT------GAFARIISEAFP-GIKCTVLDLPHAVTDMPQTDNLKY-IEGDMFQF-I-PPSDAFFFKTV 82 (180)
Q Consensus 13 ~~~~~~iLdiG~G~------G~~~~~l~~~~~-~~~~~~~D~~~~~~~a~~~~~~~~-~~~d~~~~-~-~~~D~v~~~~~ 82 (180)
++++.+|||+|||+ |. ..+++..+ ..+++++|+++.+ .++++ +++|+.+. . ..||+|+++..
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~v------~~v~~~i~gD~~~~~~~~~fD~Vvsn~~ 132 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFV------SDADSTLIGDCATVHTANKWDLIISDMY 132 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCB------CSSSEEEESCGGGCCCSSCEEEEEECCC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCCC------CCCEEEEECccccCCccCcccEEEEcCC
Confidence 67788999999944 66 44555655 6899999997652 36888 99999662 2 36999999754
Q ss_pred ccc--------CC-hHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 83 FHF--------FD-DEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 83 l~~--------~~-~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
.+. .. ......+++++.++|+| ||.+++..
T Consensus 133 ~~~~g~~~~d~~~~~~l~~~~l~~a~r~Lkp---GG~~v~~~ 171 (290)
T 2xyq_A 133 DPRTKHVTKENDSKEGFFTYLCGFIKQKLAL---GGSIAVKI 171 (290)
T ss_dssp CCC---CCSCCCCCCTHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCC---CcEEEEEE
Confidence 221 11 12234789999999999 88888754
No 227
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.21 E-value=1.6e-10 Score=81.28 Aligned_cols=88 Identities=18% Similarity=0.168 Sum_probs=68.5
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCcccCCCccEEEeccccccCC
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQFIPPSDAFFFKTVFHFFD 87 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~ 87 (180)
.++.+|||+|||+|.++..+++.. ..+++++|+++ +++.+++ ..++++.++|+.+..+.||+|+++-.++...
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~D~v~~~~p~~~~~ 126 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFNSRVDIVIMNPPFGSQR 126 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCCCCCSEEEECCCCSSSS
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcCCCCCEEEEcCCCcccc
Confidence 457899999999999999998874 34799999965 8877764 1279999999966444799999998877765
Q ss_pred hHHHHHHHHHHHHhh
Q 030291 88 DEDCLKLLKKCREAI 102 (180)
Q Consensus 88 ~~~~~~~l~~~~~~L 102 (180)
......+++++.+.+
T Consensus 127 ~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 127 KHADRPFLLKAFEIS 141 (207)
T ss_dssp TTTTHHHHHHHHHHC
T ss_pred CCchHHHHHHHHHhc
Confidence 433346788877776
No 228
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.20 E-value=6e-11 Score=87.25 Aligned_cols=105 Identities=9% Similarity=0.088 Sum_probs=77.1
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCC-CeEEEeeCch-hhccCCC------CCCeeEEecCCccc-------CCCccEE
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPG-IKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQF-------IPPSDAF 77 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~-~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~-------~~~~D~v 77 (180)
..++.+|||+|||+|..+..+++..++ .+++++|+++ +++.+++ ..++++.++|..+. ...||+|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 457789999999999999999998765 7999999965 7777654 34899999998542 3469999
Q ss_pred Eec------cccccCC---h-------HHHHHHHHHHHHhhccCCCCcEEEEEEeeeCC
Q 030291 78 FFK------TVFHFFD---D-------EDCLKLLKKCREAIASNGERGKVLIIDIVIDE 120 (180)
Q Consensus 78 ~~~------~~l~~~~---~-------~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~ 120 (180)
++. +++++-+ . ....++++++.++|+| ||.++++......
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~lv~stcs~~~ 216 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKK---DGELVYSTCSMEV 216 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEE---EEEEEEEESCCCT
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCC---CCEEEEEECCCCh
Confidence 985 2222100 0 1234789999999999 8888887765433
No 229
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.19 E-value=2e-11 Score=90.80 Aligned_cols=98 Identities=10% Similarity=0.132 Sum_probs=71.8
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----------CCCeeEEecCCccc----CCCccEEE
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----------TDNLKYIEGDMFQF----IPPSDAFF 78 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----------~~~~~~~~~d~~~~----~~~~D~v~ 78 (180)
+.+.+|||||||+|..+..+++..+..+++++|+++ +++.+++ ..++++.++|..+. ...||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 456899999999999999999887778999999965 7776653 36899999997542 23699999
Q ss_pred eccccccCChH---HHHHHHHHHHHhhccCCCCcEEEEE
Q 030291 79 FKTVFHFFDDE---DCLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 79 ~~~~l~~~~~~---~~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
+...-+..... ...+++++++++|+| ||.+++.
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~ 204 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKE---DGVFSAE 204 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEE---EEEEEEE
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCC---CcEEEEE
Confidence 85432112111 124789999999999 7777664
No 230
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.18 E-value=1.5e-10 Score=88.68 Aligned_cols=120 Identities=14% Similarity=0.126 Sum_probs=86.6
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcc-cC--CCccEEEeccc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQ-FI--PPSDAFFFKTV 82 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~-~~--~~~D~v~~~~~ 82 (180)
.++.+|||+|||+|.++..++...+..+++++|+++ +++.+++ ..++++.++|+.+ +. ..||+|+++-.
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npP 295 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLP 295 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECC
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCC
Confidence 567899999999999999999987656899999966 8888875 2489999999966 22 36999999654
Q ss_pred cccCC------hHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHH
Q 030291 83 FHFFD------DEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLF 156 (180)
Q Consensus 83 l~~~~------~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 156 (180)
+..-. ......+++.++++| + |+.+++.. +.+.+.+.+
T Consensus 296 yg~r~~~~~~~~~ly~~~~~~l~r~l-~---g~~~~i~~--------------------------------~~~~~~~~~ 339 (373)
T 3tm4_A 296 YGLKIGKKSMIPDLYMKFFNELAKVL-E---KRGVFITT--------------------------------EKKAIEEAI 339 (373)
T ss_dssp CC------CCHHHHHHHHHHHHHHHE-E---EEEEEEES--------------------------------CHHHHHHHH
T ss_pred CCcccCcchhHHHHHHHHHHHHHHHc-C---CeEEEEEC--------------------------------CHHHHHHHH
Confidence 33211 111247888999988 5 34444421 345677788
Q ss_pred HHcCCeEEEEeec
Q 030291 157 VNAGFTHYKIAPI 169 (180)
Q Consensus 157 ~~aGf~~~~~~~~ 169 (180)
++.||+..+....
T Consensus 340 ~~~G~~~~~~~~~ 352 (373)
T 3tm4_A 340 AENGFEIIHHRVI 352 (373)
T ss_dssp HHTTEEEEEEEEE
T ss_pred HHcCCEEEEEEEE
Confidence 8899988766544
No 231
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.17 E-value=3.3e-10 Score=85.48 Aligned_cols=94 Identities=19% Similarity=0.333 Sum_probs=71.8
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CC--CeeEEecCCccc-------CCCccEEE
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TD--NLKYIEGDMFQF-------IPPSDAFF 78 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~--~~~~~~~d~~~~-------~~~~D~v~ 78 (180)
++.+|||+|||+|.++..+++. +.+++++|+++ +++.+++ .. +++++++|+.+. ...||+|+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~--ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAA--GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCcEEEcccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 5679999999999999999886 45899999966 8888874 12 599999998652 24699999
Q ss_pred eccc----------cccCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 79 FKTV----------FHFFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 79 ~~~~----------l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
+.-. +++. .....+++++.++|+| ||.+++..
T Consensus 231 ~dPP~~~~~~~~~~~~~~--~~~~~ll~~~~~~Lkp---gG~lli~~ 272 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLF--DHLPLMLDICREILSP---KALGLVLT 272 (332)
T ss_dssp ECCCSEEECTTCCEEEHH--HHHHHHHHHHHHTBCT---TCCEEEEE
T ss_pred ECCccccCCchHHHHHHH--HHHHHHHHHHHHhcCc---CcEEEEEE
Confidence 8432 1112 2234789999999999 88877654
No 232
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.17 E-value=1.5e-10 Score=89.87 Aligned_cols=97 Identities=12% Similarity=0.091 Sum_probs=74.1
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHC-CCCeEEEeeCch-hhccCCCCCCeeEEecCCcccC--CCccEEEeccccc-----
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAF-PGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQFI--PPSDAFFFKTVFH----- 84 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~~--~~~D~v~~~~~l~----- 84 (180)
..+.+|||+|||+|.++..+++.. +..+++++|+++ +++.| .++++.++|+.+.. +.||+|+++=...
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---~~~~~~~~D~~~~~~~~~fD~Ii~NPPy~~~~~~ 114 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---PWAEGILADFLLWEPGEAFDLILGNPPYGIVGEA 114 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---TTEEEEESCGGGCCCSSCEEEEEECCCCCCBSCT
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---CCCcEEeCChhhcCccCCCCEEEECcCccCcccc
Confidence 456799999999999999999875 578999999965 77776 67999999997643 3699999952211
Q ss_pred -----cCChHHH-----------------HHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 85 -----FFDDEDC-----------------LKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 85 -----~~~~~~~-----------------~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
|+.+... ..+++++.+.|+| ||.+++..+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~---~G~~~~i~p 165 (421)
T 2ih2_A 115 SKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKP---GGVLVFVVP 165 (421)
T ss_dssp TTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEE---EEEEEEEEE
T ss_pred cccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCC---CCEEEEEEC
Confidence 1223221 2679999999999 888888664
No 233
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.16 E-value=1.2e-10 Score=91.32 Aligned_cols=104 Identities=14% Similarity=0.143 Sum_probs=80.1
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCC-CeEEEeeCch-hhccCCC------CCCeeEEecCCccc---C--CCccEEEe
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPG-IKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQF---I--PPSDAFFF 79 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~-~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~---~--~~~D~v~~ 79 (180)
..++.+|||+|||+|..+..+++..++ .+++++|+++ ++..+++ ..++++.++|..+. . ..||+|++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 466789999999999999999998766 7999999965 7766653 34799999998653 2 35999996
Q ss_pred ------ccccccCChHH--------------HHHHHHHHHHhhccCCCCcEEEEEEeeeC
Q 030291 80 ------KTVFHFFDDED--------------CLKLLKKCREAIASNGERGKVLIIDIVID 119 (180)
Q Consensus 80 ------~~~l~~~~~~~--------------~~~~l~~~~~~L~p~~~~G~~~~~~~~~~ 119 (180)
.+++++.++.. +..+|+++.++|+| ||.++++++...
T Consensus 337 D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lkp---GG~lvy~tcs~~ 393 (450)
T 2yxl_A 337 DAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKP---GGRLLYTTCSIF 393 (450)
T ss_dssp ECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEE---EEEEEEEESCCC
T ss_pred cCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEeCCCC
Confidence 34555544431 14789999999999 888888776543
No 234
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.11 E-value=6.4e-10 Score=81.69 Aligned_cols=119 Identities=12% Similarity=0.080 Sum_probs=87.7
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcccC--CCccEEEeccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQFI--PPSDAFFFKTV 82 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~~--~~~D~v~~~~~ 82 (180)
.+++.+|||+|||+|.++..+++.. .++++++|+++ +++.+++ ..++++.++|..+.. ..||.|+++..
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCC
Confidence 4678999999999999999988874 46899999955 7777764 567999999997643 35999997643
Q ss_pred cccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCe
Q 030291 83 FHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFT 162 (180)
Q Consensus 83 l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 162 (180)
+... .+|..+.+.|++ ||.+.+.+....... .....+.+.+..++.|++
T Consensus 202 ----~~~~--~~l~~a~~~lk~---gG~ih~~~~~~e~~~----------------------~~~~~e~i~~~~~~~g~~ 250 (278)
T 3k6r_A 202 ----VRTH--EFIPKALSIAKD---GAIIHYHNTVPEKLM----------------------PREPFETFKRITKEYGYD 250 (278)
T ss_dssp ----SSGG--GGHHHHHHHEEE---EEEEEEEEEEEGGGT----------------------TTTTHHHHHHHHHHTTCE
T ss_pred ----CcHH--HHHHHHHHHcCC---CCEEEEEeeeccccc----------------------chhHHHHHHHHHHHcCCc
Confidence 2223 678889999999 887766654332210 112346677888899987
Q ss_pred E
Q 030291 163 H 163 (180)
Q Consensus 163 ~ 163 (180)
+
T Consensus 251 v 251 (278)
T 3k6r_A 251 V 251 (278)
T ss_dssp E
T ss_pred E
Confidence 5
No 235
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.11 E-value=2.5e-10 Score=89.04 Aligned_cols=104 Identities=13% Similarity=0.122 Sum_probs=79.4
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCccc---C--CCccEEEe--
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQF---I--PPSDAFFF-- 79 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~~---~--~~~D~v~~-- 79 (180)
..++.+|||+|||+|..+..+++..++.+++++|+++ ++..+++ ..++++.++|..+. . ..||+|++
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 4567899999999999999999998778999999965 7776654 33578899998652 1 36999996
Q ss_pred ----ccccccCChHH--------------HHHHHHHHHHhhccCCCCcEEEEEEeeeC
Q 030291 80 ----KTVFHFFDDED--------------CLKLLKKCREAIASNGERGKVLIIDIVID 119 (180)
Q Consensus 80 ----~~~l~~~~~~~--------------~~~~l~~~~~~L~p~~~~G~~~~~~~~~~ 119 (180)
.+++++.++.. +.++++++.+.|+| ||.++++++...
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~Lkp---GG~lvystcs~~ 378 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT---GGTLVYATCSVL 378 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEE---EEEEEEEESCCC
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCC---CCEEEEEECCCC
Confidence 23455544421 24789999999999 888888775443
No 236
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.08 E-value=9.3e-11 Score=90.23 Aligned_cols=98 Identities=15% Similarity=0.166 Sum_probs=71.8
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CC-CeeEEecCCcccC-------CCccEE
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TD-NLKYIEGDMFQFI-------PPSDAF 77 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~-~~~~~~~d~~~~~-------~~~D~v 77 (180)
.++.+|||+|||+|.++..+++.. ..+++++|+++ +++.+++ .. ++++.++|+.+.. ..||+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 457899999999999999998863 23899999966 8888874 22 8999999986521 269999
Q ss_pred Eecccc-----ccCCh--HHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 78 FFKTVF-----HFFDD--EDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 78 ~~~~~l-----~~~~~--~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
++.-.. .+..+ ....++++.+.+.|+| ||.+++..
T Consensus 290 i~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~p---gG~l~~~~ 331 (385)
T 2b78_A 290 IIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSE---NGLIIAST 331 (385)
T ss_dssp EECCCCC-----CCCCHHHHHHHHHHHHHHTEEE---EEEEEEEE
T ss_pred EECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCC---CcEEEEEe
Confidence 984322 22222 2234678888999999 77776654
No 237
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.05 E-value=9.9e-11 Score=87.16 Aligned_cols=96 Identities=17% Similarity=0.320 Sum_probs=66.6
Q ss_pred cccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCcc-cCCCcc
Q 030291 4 LLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQ-FIPPSD 75 (180)
Q Consensus 4 ~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~-~~~~~D 75 (180)
.+++.+. ..++.+|||||||+|.++..+++. ..+++++|+++ +++.+++ ..++++.++|+.+ +.+.||
T Consensus 33 ~i~~~~~--~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~D 108 (299)
T 2h1r_A 33 KIIYAAK--IKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFPKFD 108 (299)
T ss_dssp HHHHHHC--CCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCCCCS
T ss_pred HHHHhcC--CCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcccCC
Confidence 3444454 567889999999999999999887 56899999965 8777764 2589999999966 445799
Q ss_pred EEEeccccccCChHHHHHHH---------------HHHHHhhcc
Q 030291 76 AFFFKTVFHFFDDEDCLKLL---------------KKCREAIAS 104 (180)
Q Consensus 76 ~v~~~~~l~~~~~~~~~~~l---------------~~~~~~L~p 104 (180)
+|+++... ++..+....++ +...+++++
T Consensus 109 ~Vv~n~py-~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~ 151 (299)
T 2h1r_A 109 VCTANIPY-KISSPLIFKLISHRPLFKCAVLMFQKEFAERMLAN 151 (299)
T ss_dssp EEEEECCG-GGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCC
T ss_pred EEEEcCCc-ccccHHHHHHHhcCCccceeeehHHHHHHHHHhcC
Confidence 99986554 44444434444 345677777
No 238
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.05 E-value=2.9e-10 Score=86.22 Aligned_cols=99 Identities=10% Similarity=0.186 Sum_probs=77.4
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCC-----CeEEEeeCch-hhccCCC-----CCCeeEEecCCcccC--CCccEEEecc
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPG-----IKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQFI--PPSDAFFFKT 81 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~-----~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~~~--~~~D~v~~~~ 81 (180)
++.+|||+|||+|.++..+++..+. .+++++|+++ ++..|+. ..++.+.++|.+... ..||+|+++-
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~~fD~Ii~NP 209 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDL 209 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEEEC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccCCccEEEECC
Confidence 5679999999999999998887543 7899999965 7777654 236889999987643 3699999988
Q ss_pred ccccCChHHH----------------HHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 82 VFHFFDDEDC----------------LKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 82 ~l~~~~~~~~----------------~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
.+++++..+. ..++.++.+.|+| ||.+++..+
T Consensus 210 Pfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~---gG~~~~v~p 257 (344)
T 2f8l_A 210 PVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKP---GGYLFFLVP 257 (344)
T ss_dssp CCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEE---EEEEEEEEE
T ss_pred CCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCC---CCEEEEEEC
Confidence 7776654331 2579999999999 888888764
No 239
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.04 E-value=1e-08 Score=78.25 Aligned_cols=152 Identities=16% Similarity=0.247 Sum_probs=94.0
Q ss_pred CCCeEEEeCCcccHHHHHHH--------HHC-------CCCeEEEeeCch-h-------hccCCC-----------C-CC
Q 030291 15 GLRSMVDVGGGTGAFARIIS--------EAF-------PGIKCTVLDLPH-A-------VTDMPQ-----------T-DN 59 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~--------~~~-------~~~~~~~~D~~~-~-------~~~a~~-----------~-~~ 59 (180)
..-+|+|+|||+|.++..+. +.+ |..++..-|++. . +...++ . .+
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 35789999999999888762 222 678899999865 4 232211 0 11
Q ss_pred --eeEEecCCcc-cC--CCccEEEeccccccCChH------------------------------------HHHHHHHHH
Q 030291 60 --LKYIEGDMFQ-FI--PPSDAFFFKTVFHFFDDE------------------------------------DCLKLLKKC 98 (180)
Q Consensus 60 --~~~~~~d~~~-~~--~~~D~v~~~~~l~~~~~~------------------------------------~~~~~l~~~ 98 (180)
+.-+.+++.. .+ .++|+|+++.+||++.+. ++..+|+..
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1223445543 22 369999999999998621 345679999
Q ss_pred HHhhccCCCCcEEEEEEeeeCCCCCch----------hhhhhhh-ccce-----e--eEeecCCcccCHHHHHHHHH-Hc
Q 030291 99 REAIASNGERGKVLIIDIVIDEKEDDR----------ELTESKL-LFDI-----F--MNFNVGGKERTEQEWGSLFV-NA 159 (180)
Q Consensus 99 ~~~L~p~~~~G~~~~~~~~~~~~~~~~----------~~~~~~~-~~~~-----~--~~~~~~~~~~~~~~~~~~l~-~a 159 (180)
++.|+| ||.+++.-....+..... .+...+. .... . .....+...++.+++.+.++ +.
T Consensus 212 a~eL~p---GG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~ 288 (374)
T 3b5i_A 212 AAEVKR---GGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANG 288 (374)
T ss_dssp HHHEEE---EEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHC
T ss_pred HHHhCC---CCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcC
Confidence 999999 888888776554432110 0101000 0000 0 00112335578999999998 58
Q ss_pred CCeEEEEeec
Q 030291 160 GFTHYKIAPI 169 (180)
Q Consensus 160 Gf~~~~~~~~ 169 (180)
||++.++...
T Consensus 289 ~F~I~~le~~ 298 (374)
T 3b5i_A 289 SFAIDKLVVY 298 (374)
T ss_dssp SEEEEEEEEE
T ss_pred CcEEEEEEEE
Confidence 9998776544
No 240
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.03 E-value=5.5e-10 Score=86.24 Aligned_cols=96 Identities=13% Similarity=0.093 Sum_probs=73.0
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------C-C-CeeEEecCCccc-------CCCccEE
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------T-D-NLKYIEGDMFQF-------IPPSDAF 77 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~-~-~~~~~~~d~~~~-------~~~~D~v 77 (180)
.++.+|||+|||+|.++..+++.. ..+++++|+++ +++.+++ . . ++++.++|+.+. ...||+|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 467899999999999999998874 45899999965 8887764 2 3 789999998652 2369999
Q ss_pred Eeccc---------cccCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 78 FFKTV---------FHFFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 78 ~~~~~---------l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
++.-. .+.... ...++.++.+.|+| ||.++++.
T Consensus 298 i~dpP~~~~~~~~~~~~~~~--~~~~l~~~~~~Lkp---gG~l~~~~ 339 (396)
T 3c0k_A 298 VMDPPKFVENKSQLMGACRG--YKDINMLAIQLLNE---GGILLTFS 339 (396)
T ss_dssp EECCSSTTTCSSSSSCCCTH--HHHHHHHHHHTEEE---EEEEEEEE
T ss_pred EECCCCCCCChhHHHHHHHH--HHHHHHHHHHhcCC---CcEEEEEe
Confidence 98532 112223 34789999999999 77777754
No 241
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.03 E-value=2.2e-09 Score=84.69 Aligned_cols=102 Identities=16% Similarity=0.153 Sum_probs=77.2
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCC-CCeEEEeeCch-hhccCCC------CCCeeEEecCCccc---C-CCccEEEec--
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFP-GIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQF---I-PPSDAFFFK-- 80 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~-~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~---~-~~~D~v~~~-- 80 (180)
++.+|||+|||+|..+..+++..+ ..+++++|+++ ++..+++ ..++.+.++|.... . ..||.|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 778999999999999999999864 47899999966 7777764 35799999998651 2 369999972
Q ss_pred ----cccccCCh--------------HHHHHHHHHHHHhhccCCCCcEEEEEEeeeC
Q 030291 81 ----TVFHFFDD--------------EDCLKLLKKCREAIASNGERGKVLIIDIVID 119 (180)
Q Consensus 81 ----~~l~~~~~--------------~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~ 119 (180)
+++.+-++ ..+.++|+++.++||| ||.++++++...
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lkp---GG~LvysTcs~~ 250 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRP---GGTLVYSTCTLN 250 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEESCCS
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCC---CCEEEEecccCC
Confidence 23333222 1234789999999999 888888776543
No 242
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.01 E-value=1.2e-10 Score=84.26 Aligned_cols=102 Identities=11% Similarity=0.184 Sum_probs=71.8
Q ss_pred cccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----CCCeeEEecCCcc-cCC---Cc
Q 030291 4 LLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----TDNLKYIEGDMFQ-FIP---PS 74 (180)
Q Consensus 4 ~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----~~~~~~~~~d~~~-~~~---~~ 74 (180)
.+++.+. ..++.+|||||||+|.++..+++.. .+++++|+++ +++.+++ ..+++++++|+.+ +.+ .|
T Consensus 20 ~i~~~~~--~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f 95 (245)
T 1yub_A 20 QIIKQLN--LKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY 95 (245)
T ss_dssp HHHHHCC--CCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE
T ss_pred HHHHhcC--CCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc
Confidence 4455555 5678899999999999999999984 7899999965 8888876 2579999999966 222 47
Q ss_pred cEEEeccccccCChHHHH----------HHH----HHHHHhhccCCCCcEEEEE
Q 030291 75 DAFFFKTVFHFFDDEDCL----------KLL----KKCREAIASNGERGKVLII 114 (180)
Q Consensus 75 D~v~~~~~l~~~~~~~~~----------~~l----~~~~~~L~p~~~~G~~~~~ 114 (180)
.|+++-. ++...+... .++ +.+.++|+| ||.+.+.
T Consensus 96 -~vv~n~P-y~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~---~G~l~v~ 144 (245)
T 1yub_A 96 -KIVGNIP-YHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDI---HRTLGLL 144 (245)
T ss_dssp -EEEEECC-SSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCG---GGSHHHH
T ss_pred -EEEEeCC-ccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCC---CCchhhh
Confidence 5555422 222222222 223 668999999 8887664
No 243
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.01 E-value=7.3e-10 Score=83.76 Aligned_cols=92 Identities=15% Similarity=0.172 Sum_probs=73.0
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------CCCeeEEecCCcccCCCccEEEecccccc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQFIPPSDAFFFKTVFHF 85 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~~~~~D~v~~~~~l~~ 85 (180)
.++.+|||+|||+|.++.. ++ ...+++++|+++ +++.+++ ..++++.++|..+....||+|++.-.-.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~dpP~~- 269 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMNLPKF- 269 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEECCTTT-
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEECCcHh-
Confidence 4678999999999999998 76 377899999965 8887764 2579999999976556799999853211
Q ss_pred CChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 86 FDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 86 ~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
.. .++..+.++|+| ||.+++.+..
T Consensus 270 ---~~--~~l~~~~~~L~~---gG~l~~~~~~ 293 (336)
T 2yx1_A 270 ---AH--KFIDKALDIVEE---GGVIHYYTIG 293 (336)
T ss_dssp ---GG--GGHHHHHHHEEE---EEEEEEEEEE
T ss_pred ---HH--HHHHHHHHHcCC---CCEEEEEEee
Confidence 11 679999999999 8888887654
No 244
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.01 E-value=6.6e-10 Score=86.91 Aligned_cols=104 Identities=7% Similarity=0.049 Sum_probs=76.6
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCC-CCeEEEeeCch-hhccCCC------CCCeeEEecCCccc----CCCccEEEec
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFP-GIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQF----IPPSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~-~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~----~~~~D~v~~~ 80 (180)
..++.+|||+|||+|..+..+++..+ ..+++++|+++ +++.+++ ..++.+.+.|..+. ...||+|++.
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~D 182 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVD 182 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEEC
Confidence 46788999999999999999988754 46899999965 7777654 45789999988542 2469999973
Q ss_pred c------ccccCChH--------------HHHHHHHHHHHhhccCCCCcEEEEEEeeeC
Q 030291 81 T------VFHFFDDE--------------DCLKLLKKCREAIASNGERGKVLIIDIVID 119 (180)
Q Consensus 81 ~------~l~~~~~~--------------~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~ 119 (180)
. ++..-++. .+.++|+.+.++|+| ||.++.+.+...
T Consensus 183 aPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp---GG~LvYsTCs~~ 238 (456)
T 3m4x_A 183 APCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKN---KGQLIYSTCTFA 238 (456)
T ss_dssp CCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEE---EEEEEEEESCCC
T ss_pred CCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEEeecc
Confidence 2 23222221 233789999999999 888888776543
No 245
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.00 E-value=4.9e-10 Score=83.05 Aligned_cols=77 Identities=13% Similarity=0.221 Sum_probs=61.8
Q ss_pred ccccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----CCCeeEEecCCcc-cCC--Cc
Q 030291 3 TLLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----TDNLKYIEGDMFQ-FIP--PS 74 (180)
Q Consensus 3 ~~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----~~~~~~~~~d~~~-~~~--~~ 74 (180)
+.+++.+. ..++.+|||||||+|.++..+++. ..+++++|+++ +++.+++ ..+++++++|+.+ +.+ .|
T Consensus 40 ~~Iv~~l~--~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~f 115 (295)
T 3gru_A 40 NKAVESAN--LTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDF 115 (295)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSCC
T ss_pred HHHHHhcC--CCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCCc
Confidence 34555565 677889999999999999999998 57899999965 8887765 4789999999976 333 49
Q ss_pred cEEEecccc
Q 030291 75 DAFFFKTVF 83 (180)
Q Consensus 75 D~v~~~~~l 83 (180)
|.|+++...
T Consensus 116 D~Iv~NlPy 124 (295)
T 3gru_A 116 NKVVANLPY 124 (295)
T ss_dssp SEEEEECCG
T ss_pred cEEEEeCcc
Confidence 999987554
No 246
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.99 E-value=1e-09 Score=79.36 Aligned_cols=62 Identities=18% Similarity=0.405 Sum_probs=50.6
Q ss_pred cccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----CCCeeEEecCCcc
Q 030291 4 LLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----TDNLKYIEGDMFQ 69 (180)
Q Consensus 4 ~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----~~~~~~~~~d~~~ 69 (180)
.+++.+. ..++.+|||||||+|.++..+++.. .+++++|+++ +++.+++ ..+++++++|+.+
T Consensus 21 ~i~~~~~--~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~ 87 (244)
T 1qam_A 21 KIMTNIR--LNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQ 87 (244)
T ss_dssp HHHTTCC--CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGG
T ss_pred HHHHhCC--CCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHh
Confidence 4455555 5678899999999999999999984 6899999965 7777654 3689999999966
No 247
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.96 E-value=1.3e-09 Score=85.42 Aligned_cols=104 Identities=9% Similarity=0.048 Sum_probs=76.9
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCC-CeEEEeeCch-hhccCCC-----CCCeeEEecCCccc----CCCccEEEe--
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPG-IKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQF----IPPSDAFFF-- 79 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~-~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~~----~~~~D~v~~-- 79 (180)
..++.+|||+|||+|..+..+++..++ .+++++|+++ ++..+++ ...+.+.++|..+. ...||+|++
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~ 178 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDA 178 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEEC
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECC
Confidence 467889999999999999999988654 6899999966 8777764 12288899998542 236999995
Q ss_pred ----ccccccCChH--------------HHHHHHHHHHHhhccCCCCcEEEEEEeeeC
Q 030291 80 ----KTVFHFFDDE--------------DCLKLLKKCREAIASNGERGKVLIIDIVID 119 (180)
Q Consensus 80 ----~~~l~~~~~~--------------~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~ 119 (180)
.+++..-++. .+.++|+.+.++|+| ||.++.+.+...
T Consensus 179 PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp---GG~LvysTCs~~ 233 (464)
T 3m6w_A 179 PCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGP---GGVLVYSTCTFA 233 (464)
T ss_dssp CCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEE---EEEEEEEESCCC
T ss_pred CcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEeccCc
Confidence 2233332321 125789999999999 888888766543
No 248
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.95 E-value=1.3e-09 Score=84.06 Aligned_cols=100 Identities=17% Similarity=0.119 Sum_probs=74.3
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------C-CCeeEEecCCccc-------CCCccEEE
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------T-DNLKYIEGDMFQF-------IPPSDAFF 78 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~-~~~~~~~~d~~~~-------~~~~D~v~ 78 (180)
+++.+|||+|||+|.++..+++.. ..+++++|+++ +++.+++ . .++++.++|+.+. ...||+|+
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g-~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi 294 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAG-ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVV 294 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEE
Confidence 367899999999999999998872 34899999966 8888764 1 2899999998652 23699999
Q ss_pred eccccccCCh-------HHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 79 FKTVFHFFDD-------EDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 79 ~~~~l~~~~~-------~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
+.-....... .....++.++.+.|+| ||.++++...
T Consensus 295 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~lv~~~~~ 337 (396)
T 2as0_A 295 LDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKD---GGILVTCSCS 337 (396)
T ss_dssp ECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEE---EEEEEEEECC
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEECC
Confidence 8532211111 2344789999999999 8877776643
No 249
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.95 E-value=2.6e-09 Score=82.26 Aligned_cols=99 Identities=14% Similarity=0.133 Sum_probs=71.5
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCccc----CCCccEEEecccc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQF----IPPSDAFFFKTVF 83 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~~----~~~~D~v~~~~~l 83 (180)
+++.+|||+|||+|.++..+++. +++++++|+++ +++.+++ .....+.++|+.+. .+.||+|++.-..
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~ 290 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPT 290 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCC
T ss_pred cCCCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCc
Confidence 45889999999999999999987 55699999976 8888875 22235668888652 2349999985332
Q ss_pred ccCC-------hHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 84 HFFD-------DEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 84 ~~~~-------~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
..-. ......+++.+.++|+| ||.++++...
T Consensus 291 f~~~~~~~~~~~~~~~~ll~~a~~~Lkp---GG~Lv~~s~s 328 (393)
T 4dmg_A 291 LVKRPEELPAMKRHLVDLVREALRLLAE---EGFLWLSSCS 328 (393)
T ss_dssp CCSSGGGHHHHHHHHHHHHHHHHHTEEE---EEEEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCC---CCEEEEEECC
Confidence 1100 01234789999999999 8888766643
No 250
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.95 E-value=1.5e-09 Score=83.48 Aligned_cols=97 Identities=12% Similarity=0.088 Sum_probs=73.2
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCccc-------CCCccEEEec
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQF-------IPPSDAFFFK 80 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~-------~~~~D~v~~~ 80 (180)
++.+|||+|||+|.++..+++. ..+++++|+++ +++.+++ ..++++.++|+.+. ...||+|++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 5679999999999999999988 56899999966 8888764 24599999998652 2369999984
Q ss_pred cccccCCh-------HHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 81 TVFHFFDD-------EDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 81 ~~l~~~~~-------~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
-....... .....++.++.+.|+| ||.++++..
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~ 326 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKE---GGILATASC 326 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEE---EEEEEEEEC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCC---CCEEEEEEC
Confidence 32111100 2344789999999999 888777654
No 251
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.90 E-value=2e-08 Score=76.75 Aligned_cols=150 Identities=17% Similarity=0.192 Sum_probs=90.2
Q ss_pred CCeEEEeCCcccHHHHHHHHH-----------------CCCCeEEEeeCch-h-----------hccCCC----CCCeeE
Q 030291 16 LRSMVDVGGGTGAFARIISEA-----------------FPGIKCTVLDLPH-A-----------VTDMPQ----TDNLKY 62 (180)
Q Consensus 16 ~~~iLdiG~G~G~~~~~l~~~-----------------~~~~~~~~~D~~~-~-----------~~~a~~----~~~~~~ 62 (180)
.-+|+|+||++|.++..+... .|..+++.-|++. - .+..++ ..+-.|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 678999999999999877655 3567888999862 1 111100 112234
Q ss_pred Ee---cCCcc-cC--CCccEEEeccccccCChHH-------------------------------------HHHHHHHHH
Q 030291 63 IE---GDMFQ-FI--PPSDAFFFKTVFHFFDDED-------------------------------------CLKLLKKCR 99 (180)
Q Consensus 63 ~~---~d~~~-~~--~~~D~v~~~~~l~~~~~~~-------------------------------------~~~~l~~~~ 99 (180)
.. +++.. .+ .++|+|+++.+||++.+.. +..+|+..+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 34433 22 3699999999999985421 223477779
Q ss_pred HhhccCCCCcEEEEEEeeeCCC--CCch--hhhhhhh------cccee--eEeecCCcccCHHHHHHHHHHcC-CeEEEE
Q 030291 100 EAIASNGERGKVLIIDIVIDEK--EDDR--ELTESKL------LFDIF--MNFNVGGKERTEQEWGSLFVNAG-FTHYKI 166 (180)
Q Consensus 100 ~~L~p~~~~G~~~~~~~~~~~~--~~~~--~~~~~~~------~~~~~--~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~ 166 (180)
+.|+| ||.+++.-....+. .... .+...+. ..+.. .....+..+.+.+|+++++++.| |++.++
T Consensus 213 ~eL~p---GG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~l 289 (384)
T 2efj_A 213 EELIS---RGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYL 289 (384)
T ss_dssp HHEEE---EEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEE
T ss_pred HHhcc---CCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEE
Confidence 99999 88888876655443 1010 1111111 00000 00112345679999999999985 787766
Q ss_pred ee
Q 030291 167 AP 168 (180)
Q Consensus 167 ~~ 168 (180)
..
T Consensus 290 e~ 291 (384)
T 2efj_A 290 ET 291 (384)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 252
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.89 E-value=1.9e-09 Score=79.01 Aligned_cols=89 Identities=17% Similarity=0.129 Sum_probs=64.3
Q ss_pred ccccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC---CCCeeEEecCCcc-cCC---Cc
Q 030291 3 TLLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ---TDNLKYIEGDMFQ-FIP---PS 74 (180)
Q Consensus 3 ~~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~---~~~~~~~~~d~~~-~~~---~~ 74 (180)
+.+++... ..++ +|||||||+|.++..+++.. .+++++|+++ +++.+++ ..+++++++|+.+ +.+ .+
T Consensus 37 ~~Iv~~~~--~~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~ 111 (271)
T 3fut_A 37 RRIVEAAR--PFTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQG 111 (271)
T ss_dssp HHHHHHHC--CCCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTT
T ss_pred HHHHHhcC--CCCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCc
Confidence 34455555 5667 99999999999999999984 6799999965 8877764 4689999999976 222 57
Q ss_pred cEEEeccccccCChHHHHHHHHH
Q 030291 75 DAFFFKTVFHFFDDEDCLKLLKK 97 (180)
Q Consensus 75 D~v~~~~~l~~~~~~~~~~~l~~ 97 (180)
|.|+++-. +++..+-..+++..
T Consensus 112 ~~iv~NlP-y~iss~il~~ll~~ 133 (271)
T 3fut_A 112 SLLVANLP-YHIATPLVTRLLKT 133 (271)
T ss_dssp EEEEEEEC-SSCCHHHHHHHHHH
T ss_pred cEEEecCc-ccccHHHHHHHhcC
Confidence 88777654 45555544444443
No 253
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.88 E-value=3.6e-09 Score=87.11 Aligned_cols=96 Identities=16% Similarity=0.212 Sum_probs=72.5
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-------C-CCeeEEecCCccc----CCCccEEEec
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-------T-DNLKYIEGDMFQF----IPPSDAFFFK 80 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------~-~~~~~~~~d~~~~----~~~~D~v~~~ 80 (180)
.++.+|||+|||+|.++..++... ..+++++|+++ +++.+++ . .+++++++|+.+. ...||+|++.
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~D 616 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFID 616 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEEC
T ss_pred cCCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEEC
Confidence 357899999999999999988753 34699999976 8888874 2 4799999999762 2369999984
Q ss_pred cc-----------cccCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 81 TV-----------FHFFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 81 ~~-----------l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
-. ++.. .....+++.+.++|+| ||.++++.
T Consensus 617 PP~f~~~~~~~~~~~~~--~~~~~ll~~a~~~Lkp---gG~L~~s~ 657 (703)
T 3v97_A 617 PPTFSNSKRMEDAFDVQ--RDHLALMKDLKRLLRA---GGTIMFSN 657 (703)
T ss_dssp CCSBC-------CCBHH--HHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred CccccCCccchhHHHHH--HHHHHHHHHHHHhcCC---CcEEEEEE
Confidence 32 1211 2344789999999999 77777544
No 254
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.88 E-value=5.5e-09 Score=81.55 Aligned_cols=90 Identities=11% Similarity=0.094 Sum_probs=64.8
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCcccC-------CCccEEE
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQFI-------PPSDAFF 78 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~~-------~~~D~v~ 78 (180)
..++.+|||+|||+|.++..+++. ..+++++|+++ +++.|++ ..++++.++|+.+.. ..||+|+
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv 361 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVL 361 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEE
T ss_pred CCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEE
Confidence 456789999999999999999887 67899999966 8888864 348999999996622 2599999
Q ss_pred eccccccCChHHHHHHHHHHHHhhccCCCCcEEEE
Q 030291 79 FKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLI 113 (180)
Q Consensus 79 ~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~ 113 (180)
++---.-. ..+++.+.+ ++| ++.+++
T Consensus 362 ~dPPr~g~-----~~~~~~l~~-~~p---~~ivyv 387 (433)
T 1uwv_A 362 LDPARAGA-----AGVMQQIIK-LEP---IRIVYV 387 (433)
T ss_dssp ECCCTTCC-----HHHHHHHHH-HCC---SEEEEE
T ss_pred ECCCCccH-----HHHHHHHHh-cCC---CeEEEE
Confidence 84322111 134555543 678 555554
No 255
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.82 E-value=2.4e-08 Score=77.68 Aligned_cols=92 Identities=12% Similarity=0.118 Sum_probs=66.9
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCcccCC-CccEEEecccccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQFIP-PSDAFFFKTVFHF 85 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~~~~-~~D~v~~~~~l~~ 85 (180)
..++.+|||+|||+|.++..+++. ..+++++|+++ +++.+++ .-.+++.++|+.+..+ .||+|++.-.-..
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~~fD~Vv~dPPr~g 365 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSVKGFDTVIVDPPRAG 365 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCTTCSEEEECCCTTC
T ss_pred cCCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCccCCCEEEEcCCccc
Confidence 356789999999999999999887 56899999966 8888875 1128999999976443 6999998543211
Q ss_pred CChHHHHHHHHHHHHhhccCCCCcEEEEE
Q 030291 86 FDDEDCLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 86 ~~~~~~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
.. . .+++.+. .|+| +|.++++
T Consensus 366 ~~--~--~~~~~l~-~l~p---~givyvs 386 (425)
T 2jjq_A 366 LH--P--RLVKRLN-REKP---GVIVYVS 386 (425)
T ss_dssp SC--H--HHHHHHH-HHCC---SEEEEEE
T ss_pred hH--H--HHHHHHH-hcCC---CcEEEEE
Confidence 11 1 3455554 4899 7766664
No 256
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.82 E-value=1.8e-08 Score=77.37 Aligned_cols=108 Identities=15% Similarity=0.114 Sum_probs=77.2
Q ss_pred cccccccccCCCeEEEeCCcccHHHHHHHHHCCC--------------------------------------CeEEEeeC
Q 030291 6 VKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPG--------------------------------------IKCTVLDL 47 (180)
Q Consensus 6 ~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~--------------------------------------~~~~~~D~ 47 (180)
+.... +.+...++|.+||+|.++...+....+ .+++++|+
T Consensus 187 l~l~~--~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDi 264 (384)
T 3ldg_A 187 ILLSN--WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDF 264 (384)
T ss_dssp HHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEES
T ss_pred HHHhC--CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEEC
Confidence 34444 567889999999999998877655322 56999999
Q ss_pred ch-hhccCCC-------CCCeeEEecCCcccC--CCccEEEeccc--cccCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 48 PH-AVTDMPQ-------TDNLKYIEGDMFQFI--PPSDAFFFKTV--FHFFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 48 ~~-~~~~a~~-------~~~~~~~~~d~~~~~--~~~D~v~~~~~--l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
+. +++.+++ ..++++.++|+.+.. ..||+|+++=- ...-.......+.+.+.+.|++. +|+.+++..
T Consensus 265 d~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~-~g~~~~iit 343 (384)
T 3ldg_A 265 DGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPL-KTWSQFILT 343 (384)
T ss_dssp CHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTC-TTSEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhC-CCcEEEEEE
Confidence 65 8888874 346999999997632 36999999733 22223345567788888888763 378887765
Q ss_pred e
Q 030291 116 I 116 (180)
Q Consensus 116 ~ 116 (180)
.
T Consensus 344 ~ 344 (384)
T 3ldg_A 344 N 344 (384)
T ss_dssp S
T ss_pred C
Confidence 4
No 257
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.82 E-value=8.6e-09 Score=79.41 Aligned_cols=109 Identities=12% Similarity=0.072 Sum_probs=75.8
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCC--------------------------------------CeEEEee
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPG--------------------------------------IKCTVLD 46 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~--------------------------------------~~~~~~D 46 (180)
++.... +.+...+||++||+|.++...+....+ .+++++|
T Consensus 193 ll~l~~--~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvD 270 (393)
T 3k0b_A 193 LVLLTS--WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGD 270 (393)
T ss_dssp HHHHSC--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEE
T ss_pred HHHHhC--CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEE
Confidence 334444 567889999999999998877665322 5699999
Q ss_pred Cch-hhccCCC-------CCCeeEEecCCcccC--CCccEEEeccccc-cCC-hHHHHHHHHHHHHhhccCCCCcEEEEE
Q 030291 47 LPH-AVTDMPQ-------TDNLKYIEGDMFQFI--PPSDAFFFKTVFH-FFD-DEDCLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 47 ~~~-~~~~a~~-------~~~~~~~~~d~~~~~--~~~D~v~~~~~l~-~~~-~~~~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
++. +++.|++ ..++++.++|+.+.. ..||+|+++=-.. .+. ......+.+.+.+.|++. +||.+++.
T Consensus 271 id~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~-~g~~~~ii 349 (393)
T 3k0b_A 271 IDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRM-PTWSVYVL 349 (393)
T ss_dssp SCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTC-TTCEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcC-CCCEEEEE
Confidence 965 8888874 346999999997632 3699999973321 122 234446777777777763 37777776
Q ss_pred Ee
Q 030291 115 DI 116 (180)
Q Consensus 115 ~~ 116 (180)
..
T Consensus 350 t~ 351 (393)
T 3k0b_A 350 TS 351 (393)
T ss_dssp EC
T ss_pred EC
Confidence 53
No 258
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.80 E-value=3.5e-09 Score=78.70 Aligned_cols=77 Identities=14% Similarity=0.236 Sum_probs=61.2
Q ss_pred ccccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCccc---C--
Q 030291 3 TLLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQF---I-- 71 (180)
Q Consensus 3 ~~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~~---~-- 71 (180)
+.+++.+. ..++.+|||+|||+|..+..+++.+++.+++++|.++ +++.+++ ..+++++++|+.+- .
T Consensus 16 ~e~l~~L~--~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~ 93 (301)
T 1m6y_A 16 REVIEFLK--PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKT 93 (301)
T ss_dssp HHHHHHHC--CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHH
T ss_pred HHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHh
Confidence 34555555 5678899999999999999999998888999999966 8887764 26899999998541 1
Q ss_pred ---CCccEEEecc
Q 030291 72 ---PPSDAFFFKT 81 (180)
Q Consensus 72 ---~~~D~v~~~~ 81 (180)
..||.|++..
T Consensus 94 ~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 94 LGIEKVDGILMDL 106 (301)
T ss_dssp TTCSCEEEEEEEC
T ss_pred cCCCCCCEEEEcC
Confidence 3699998743
No 259
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.79 E-value=1.3e-08 Score=76.91 Aligned_cols=97 Identities=13% Similarity=0.172 Sum_probs=69.1
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC--C------------CCeeEEecCCccc-------C
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ--T------------DNLKYIEGDMFQF-------I 71 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~--~------------~~~~~~~~d~~~~-------~ 71 (180)
+++.+||+||||+|..++.+++..+ .+++.+|+++ +++.+++ . ++++++.+|..+. .
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 4688999999999999999988765 7899999965 7777764 0 2699999999662 2
Q ss_pred CCccEEEecccc---ccCCh-HHHHHHHHHH----HHhhccCCCCcEEEEE
Q 030291 72 PPSDAFFFKTVF---HFFDD-EDCLKLLKKC----REAIASNGERGKVLII 114 (180)
Q Consensus 72 ~~~D~v~~~~~l---~~~~~-~~~~~~l~~~----~~~L~p~~~~G~~~~~ 114 (180)
..||+|++...- ...+. ....++++.+ .++|+| ||.++..
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~p---gGilv~q 313 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQ---DGKYFTQ 313 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEE---EEEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCC---CcEEEEE
Confidence 469999985432 11111 1123666666 899999 5655554
No 260
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.78 E-value=2.3e-09 Score=83.98 Aligned_cols=102 Identities=15% Similarity=0.068 Sum_probs=74.1
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHC-------------CCCeEEEeeCch-hhccCCC------CC--CeeEEecCCccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAF-------------PGIKCTVLDLPH-AVTDMPQ------TD--NLKYIEGDMFQF 70 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~-------------~~~~~~~~D~~~-~~~~a~~------~~--~~~~~~~d~~~~ 70 (180)
...+.+|||+|||+|.++..+.+.. +..+++|+|+++ ++..|+. .. +..+.++|.+..
T Consensus 169 ~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~ 248 (445)
T 2okc_A 169 PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEK 248 (445)
T ss_dssp CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTS
T ss_pred CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCC
Confidence 3456799999999999988877652 346799999955 7666653 11 678899998763
Q ss_pred C--CCccEEEeccccccCChH---------------HHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 71 I--PPSDAFFFKTVFHFFDDE---------------DCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 71 ~--~~~D~v~~~~~l~~~~~~---------------~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
. ..||+|+++-.+...... ....++..+.+.|+| ||.+.++.+.
T Consensus 249 ~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~---gG~~a~V~p~ 309 (445)
T 2okc_A 249 EPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKT---GGRAAVVLPD 309 (445)
T ss_dssp CCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEE---EEEEEEEEEH
T ss_pred cccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhcc---CCEEEEEECC
Confidence 3 369999998655443211 113789999999999 8988887653
No 261
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.76 E-value=3.9e-08 Score=74.54 Aligned_cols=151 Identities=15% Similarity=0.199 Sum_probs=92.0
Q ss_pred cCCCeEEEeCCcccHHHHHHHHH----------------CCCCeEEEeeCch-hhccCCC--C-----CCeeEE---ecC
Q 030291 14 QGLRSMVDVGGGTGAFARIISEA----------------FPGIKCTVLDLPH-AVTDMPQ--T-----DNLKYI---EGD 66 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~----------------~~~~~~~~~D~~~-~~~~a~~--~-----~~~~~~---~~d 66 (180)
+..-+|+|+||++|.++..+... .|...++.-|+|. .....-+ . .+-.|. .++
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESC
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchh
Confidence 34568999999999876644322 4567889999865 4333221 1 122333 445
Q ss_pred Ccc-cC--CCccEEEeccccccCCh-------------------------------HHHHHHHHHHHHhhccCCCCcEEE
Q 030291 67 MFQ-FI--PPSDAFFFKTVFHFFDD-------------------------------EDCLKLLKKCREAIASNGERGKVL 112 (180)
Q Consensus 67 ~~~-~~--~~~D~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~L~p~~~~G~~~ 112 (180)
+.. .+ .++|+|+++.++|++.+ .++..+|+..++.|+| ||.++
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~p---GG~mv 206 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVP---GGRMV 206 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCT---TCEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CceEE
Confidence 544 22 36999999999999754 1345669999999999 99998
Q ss_pred EEEeeeCCCCC--------chhhhhhhh------ccce--eeEeecCCcccCHHHHHHHHHHcCC-eEEEEe
Q 030291 113 IIDIVIDEKED--------DRELTESKL------LFDI--FMNFNVGGKERTEQEWGSLFVNAGF-THYKIA 167 (180)
Q Consensus 113 ~~~~~~~~~~~--------~~~~~~~~~------~~~~--~~~~~~~~~~~~~~~~~~~l~~aGf-~~~~~~ 167 (180)
+.-...++... ...+...+. ..+. ......+..+.+.+|+++.+++.|. ++.++.
T Consensus 207 l~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e 278 (359)
T 1m6e_X 207 LTILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIE 278 (359)
T ss_dssp EEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEE
T ss_pred EEEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEE
Confidence 87766554321 001111110 0000 0001123456789999999999965 665543
No 262
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.76 E-value=6.5e-09 Score=75.31 Aligned_cols=64 Identities=23% Similarity=0.456 Sum_probs=51.4
Q ss_pred ccccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC--CCCeeEEecCCcc
Q 030291 3 TLLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ--TDNLKYIEGDMFQ 69 (180)
Q Consensus 3 ~~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~--~~~~~~~~~d~~~ 69 (180)
+.+++.+. ..++.+|||||||+|.++..+++. +..+++++|++. +++.+++ ..+++++++|+.+
T Consensus 21 ~~iv~~~~--~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~ 87 (249)
T 3ftd_A 21 KKIAEELN--IEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSIGDERLEVINEDASK 87 (249)
T ss_dssp HHHHHHTT--CCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTT
T ss_pred HHHHHhcC--CCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhh
Confidence 34555555 667889999999999999999887 347899999965 8777765 3578999999965
No 263
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.76 E-value=1.3e-08 Score=78.19 Aligned_cols=103 Identities=15% Similarity=0.132 Sum_probs=73.8
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCC--------------------------------------CCeEEEeeCch-hhcc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFP--------------------------------------GIKCTVLDLPH-AVTD 53 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~--------------------------------------~~~~~~~D~~~-~~~~ 53 (180)
+.+..++||++||+|.++..++.... ..+++++|++. +++.
T Consensus 193 ~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~ 272 (385)
T 3ldu_A 193 WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDI 272 (385)
T ss_dssp CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHH
Confidence 56788999999999999888776532 15799999965 8888
Q ss_pred CCC-------CCCeeEEecCCcccC--CCccEEEeccccc-cCC-hHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 54 MPQ-------TDNLKYIEGDMFQFI--PPSDAFFFKTVFH-FFD-DEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 54 a~~-------~~~~~~~~~d~~~~~--~~~D~v~~~~~l~-~~~-~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
|+. ..++++.++|+.+.. ..||+|+++=... .+. ......+.+++.+.|++. +|+.+++...
T Consensus 273 Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~-~g~~~~iit~ 345 (385)
T 3ldu_A 273 ARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKL-KNWSYYLITS 345 (385)
T ss_dssp HHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTS-BSCEEEEEES
T ss_pred HHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhC-CCCEEEEEEC
Confidence 875 247999999997632 3699999965432 222 234456777777777763 3677777643
No 264
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.73 E-value=5.4e-08 Score=70.59 Aligned_cols=98 Identities=10% Similarity=0.078 Sum_probs=64.2
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----CCCeeEEecCC--cc-cCCCccEEEeccccc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----TDNLKYIEGDM--FQ-FIPPSDAFFFKTVFH 84 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----~~~~~~~~~d~--~~-~~~~~D~v~~~~~l~ 84 (180)
+++..+|||||||+|.++...++..+-.++.++|+.. +...... ..++.....++ .. ....+|+|++..+.+
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~apn 151 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGES 151 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCccC
Confidence 6788899999999999999887765555677888753 2111111 11455555554 11 123699999987665
Q ss_pred ----cCChHHHHHHHHHHHHhhccCCCC-cEEEE
Q 030291 85 ----FFDDEDCLKLLKKCREAIASNGER-GKVLI 113 (180)
Q Consensus 85 ----~~~~~~~~~~l~~~~~~L~p~~~~-G~~~~ 113 (180)
..+......+|..+.++|+| | |.+++
T Consensus 152 sG~~~~D~~rs~~LL~~a~~~Lkp---G~G~FV~ 182 (277)
T 3evf_A 152 SSSSVTEGERTVRVLDTVEKWLAC---GVDNFCV 182 (277)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHTT---CCSEEEE
T ss_pred cCchHHHHHHHHHHHHHHHHHhCC---CCCeEEE
Confidence 22222223457888999999 8 77777
No 265
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.69 E-value=5.7e-09 Score=75.86 Aligned_cols=63 Identities=17% Similarity=0.307 Sum_probs=51.8
Q ss_pred ccccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----CCCeeEEecCCcc
Q 030291 3 TLLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----TDNLKYIEGDMFQ 69 (180)
Q Consensus 3 ~~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----~~~~~~~~~d~~~ 69 (180)
+.+++.+. ..++.+|||||||+|.++..+++. ..+++++|+++ +++.+++ ..+++++++|+.+
T Consensus 19 ~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~--~~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~ 86 (255)
T 3tqs_A 19 QKIVSAIH--PQKTDTLVEIGPGRGALTDYLLTE--CDNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQ 86 (255)
T ss_dssp HHHHHHHC--CCTTCEEEEECCTTTTTHHHHTTT--SSEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTT
T ss_pred HHHHHhcC--CCCcCEEEEEcccccHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHh
Confidence 34555555 677889999999999999999988 46899999965 8887764 4789999999966
No 266
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.68 E-value=6.8e-08 Score=71.17 Aligned_cols=98 Identities=15% Similarity=0.199 Sum_probs=73.4
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-----------CCCeeEEecCCcccC----CCccEE
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----------TDNLKYIEGDMFQFI----PPSDAF 77 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----------~~~~~~~~~d~~~~~----~~~D~v 77 (180)
+++++||=||.|.|..++.+++..+..+++.+|+.+ +++.+++ .+|++++.+|..... ..||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 578999999999999999999988788999999954 7776653 579999999997633 369999
Q ss_pred EeccccccCC--hHHHHHHHHHHHHhhccCCCCcEEEEE
Q 030291 78 FFKTVFHFFD--DEDCLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 78 ~~~~~l~~~~--~~~~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
++-..=-.-+ .....++++.++++|+| ||.++..
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p---~Gv~v~q 197 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNP---GGIFVAQ 197 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEE---EEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCC---CCEEEEe
Confidence 9743211001 11122789999999999 5655553
No 267
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.67 E-value=3.5e-09 Score=77.96 Aligned_cols=64 Identities=20% Similarity=0.305 Sum_probs=51.3
Q ss_pred cccccccccccCCCeEEEeCCcccHHHHHHHHHCCC--CeEEEeeCch-hhccCCC--CCCeeEEecCCcc
Q 030291 4 LLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPG--IKCTVLDLPH-AVTDMPQ--TDNLKYIEGDMFQ 69 (180)
Q Consensus 4 ~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~--~~~~~~D~~~-~~~~a~~--~~~~~~~~~d~~~ 69 (180)
.+++.+. ..++.+|||||||+|.++..+++..+. .+++++|+++ +++.+++ ..+++++++|+.+
T Consensus 33 ~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~ 101 (279)
T 3uzu_A 33 AIVAAIR--PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALT 101 (279)
T ss_dssp HHHHHHC--CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGG
T ss_pred HHHHhcC--CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhc
Confidence 3455555 667889999999999999999988532 4599999965 8888765 3689999999965
No 268
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.66 E-value=1.4e-07 Score=68.54 Aligned_cols=127 Identities=17% Similarity=0.148 Sum_probs=80.7
Q ss_pred CCCeEEEeCCcccHHHHHHHHH-------CCC-----CeEEEeeC-c---hhhccC-----------C------------
Q 030291 15 GLRSMVDVGGGTGAFARIISEA-------FPG-----IKCTVLDL-P---HAVTDM-----------P------------ 55 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~-------~~~-----~~~~~~D~-~---~~~~~a-----------~------------ 55 (180)
+..+|||||+|+|..+..+++. .|. .+++++|. + +++..+ +
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4579999999999988886654 563 58899997 4 122211 0
Q ss_pred --------CCCCeeEEecCCccc---CC-----CccEEEecc-ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeee
Q 030291 56 --------QTDNLKYIEGDMFQF---IP-----PSDAFFFKT-VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVI 118 (180)
Q Consensus 56 --------~~~~~~~~~~d~~~~---~~-----~~D~v~~~~-~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~ 118 (180)
...++++..+|+.+. .+ .||+|+.-. .-..-++-....+++.+.+.|+| ||.++...
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~p---GG~l~tys--- 213 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARP---GGTLATFT--- 213 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEE---EEEEEESC---
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCC---CcEEEEEe---
Confidence 124677888998552 21 599999843 22212221134789999999999 66555311
Q ss_pred CCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEEEEeecCCceeEE
Q 030291 119 DEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHYKIAPIFGIKSLI 176 (180)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~ 176 (180)
....+...|.++||++.++...++...++
T Consensus 214 -----------------------------aa~~vrr~L~~aGF~v~~~~g~~~kr~m~ 242 (257)
T 2qy6_A 214 -----------------------------SAGFVRRGLQEAGFTMQKRKGFGRKREML 242 (257)
T ss_dssp -----------------------------CBHHHHHHHHHHTEEEEEECCSTTCCCEE
T ss_pred -----------------------------CCHHHHHHHHHCCCEEEeCCCCCCCCceE
Confidence 01346778888999987766655543333
No 269
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.61 E-value=1.1e-08 Score=78.36 Aligned_cols=88 Identities=14% Similarity=0.202 Sum_probs=64.9
Q ss_pred CCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------CCCeeEEecCCcccC-----------------
Q 030291 16 LRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQFI----------------- 71 (180)
Q Consensus 16 ~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~~----------------- 71 (180)
+.+|||+|||+|.++..+++. ..+++++|+++ +++.+++ ..++++.++|+.+..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~ 291 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDL 291 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCG
T ss_pred CCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccc
Confidence 578999999999999988875 45799999965 8888764 358999999985421
Q ss_pred --CCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 72 --PPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 72 --~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
..||+|++.--- ..+..++.+.|++ +|.++.+..
T Consensus 292 ~~~~fD~Vv~dPPr--------~g~~~~~~~~l~~---~g~ivyvsc 327 (369)
T 3bt7_A 292 KSYQCETIFVDPPR--------SGLDSETEKMVQA---YPRILYISC 327 (369)
T ss_dssp GGCCEEEEEECCCT--------TCCCHHHHHHHTT---SSEEEEEES
T ss_pred ccCCCCEEEECcCc--------cccHHHHHHHHhC---CCEEEEEEC
Confidence 269999873211 1234556667777 788888764
No 270
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.59 E-value=8.5e-08 Score=62.97 Aligned_cols=76 Identities=12% Similarity=0.080 Sum_probs=55.1
Q ss_pred ccCCCeEEEeCCccc-HHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcccCC----CccEEEeccccccC
Q 030291 13 FQGLRSMVDVGGGTG-AFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQFIP----PSDAFFFKTVFHFF 86 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G-~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~~~----~~D~v~~~~~l~~~ 86 (180)
..++.+|||||||.| ..+..|++.. +..++++|+++ .+. +++.|++++.. .||+|.+...
T Consensus 33 ~~~~~rVlEVG~G~g~~vA~~La~~~-g~~V~atDInp~Av~---------~v~dDiF~P~~~~Y~~~DLIYsirP---- 98 (153)
T 2k4m_A 33 SGPGTRVVEVGAGRFLYVSDYIRKHS-KVDLVLTDIKPSHGG---------IVRDDITSPRMEIYRGAALIYSIRP---- 98 (153)
T ss_dssp SCSSSEEEEETCTTCCHHHHHHHHHS-CCEEEEECSSCSSTT---------EECCCSSSCCHHHHTTEEEEEEESC----
T ss_pred CCCCCcEEEEccCCChHHHHHHHHhC-CCeEEEEECCccccc---------eEEccCCCCcccccCCcCEEEEcCC----
Confidence 456789999999999 5888888743 78899999955 444 78899987543 6999987433
Q ss_pred ChHHHHHHHHHHHHhhc
Q 030291 87 DDEDCLKLLKKCREAIA 103 (180)
Q Consensus 87 ~~~~~~~~l~~~~~~L~ 103 (180)
+++....+-++++...
T Consensus 99 -P~El~~~i~~lA~~v~ 114 (153)
T 2k4m_A 99 -PAEIHSSLMRVADAVG 114 (153)
T ss_dssp -CTTTHHHHHHHHHHHT
T ss_pred -CHHHHHHHHHHHHHcC
Confidence 2333345666666664
No 271
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.58 E-value=1.4e-07 Score=68.59 Aligned_cols=106 Identities=15% Similarity=0.161 Sum_probs=68.4
Q ss_pred cccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----CCCeeEEec--CCcc-cCCCcc
Q 030291 4 LLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----TDNLKYIEG--DMFQ-FIPPSD 75 (180)
Q Consensus 4 ~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----~~~~~~~~~--d~~~-~~~~~D 75 (180)
+|.+++. +.+..+|||||||+|.++...++..+-.++.++|+.. +...+.. ..++..... |+.. ....+|
T Consensus 81 ei~eK~~--Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~D 158 (282)
T 3gcz_A 81 WMEERGY--VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGD 158 (282)
T ss_dssp HHHHTTS--CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCS
T ss_pred HHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcC
Confidence 3445554 7888899999999999999888766566788999854 3333321 223333332 3322 223699
Q ss_pred EEEeccccc----cCChHHHHHHHHHHHHhhccCCCC--cEEEEE
Q 030291 76 AFFFKTVFH----FFDDEDCLKLLKKCREAIASNGER--GKVLII 114 (180)
Q Consensus 76 ~v~~~~~l~----~~~~~~~~~~l~~~~~~L~p~~~~--G~~~~~ 114 (180)
+|+|-.+.+ ..+......+|.-+.++|+| | |.+++-
T Consensus 159 vVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~---g~~G~Fv~K 200 (282)
T 3gcz_A 159 TLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQE---GNYTEFCIK 200 (282)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHH---HCCCEEEEE
T ss_pred EEEecCccCCCChHHHHHHHHHHHHHHHHHcCC---CCCCcEEEE
Confidence 999977766 22222223467777899999 6 766663
No 272
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.57 E-value=1.5e-08 Score=73.58 Aligned_cols=63 Identities=19% Similarity=0.202 Sum_probs=48.0
Q ss_pred ccccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----CCCeeEEecCCcc
Q 030291 3 TLLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----TDNLKYIEGDMFQ 69 (180)
Q Consensus 3 ~~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----~~~~~~~~~d~~~ 69 (180)
+.+++.+. ..++.+|||||||+|.++. +. ..+..+++++|+++ +++.+++ ..+++++++|+.+
T Consensus 11 ~~iv~~~~--~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~ 78 (252)
T 1qyr_A 11 DSIVSAIN--PQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMT 78 (252)
T ss_dssp HHHHHHHC--CCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGG
T ss_pred HHHHHhcC--CCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhh
Confidence 34555555 6778899999999999999 54 44333499999965 8887765 2489999999965
No 273
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.55 E-value=2e-07 Score=71.49 Aligned_cols=92 Identities=13% Similarity=0.094 Sum_probs=69.3
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----C-----------------CCeeEEecCCccc--
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----T-----------------DNLKYIEGDMFQF-- 70 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----~-----------------~~~~~~~~d~~~~-- 70 (180)
.+.+|||+|||+|..+..+++..+..+++++|+++ +++.+++ . .++++.++|+...
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 46799999999999999999997777899999965 7766653 1 2388899998552
Q ss_pred -C-CCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 71 -I-PPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 71 -~-~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
. ..||+|++.- . .... .++..+.+.|++ ||.++++.
T Consensus 127 ~~~~~fD~I~lDP-~---~~~~--~~l~~a~~~lk~---gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDP-F---GSPM--EFLDTALRSAKR---RGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECC-S---SCCH--HHHHHHHHHEEE---EEEEEEEE
T ss_pred hccCCCCEEEeCC-C---CCHH--HHHHHHHHhcCC---CCEEEEEe
Confidence 2 3699999632 1 1222 779999999999 78666654
No 274
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.55 E-value=8e-08 Score=69.94 Aligned_cols=71 Identities=11% Similarity=0.246 Sum_probs=54.0
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeC-c-------hhhccCCC-------CCCeeEEecCCccc---C---
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDL-P-------HAVTDMPQ-------TDNLKYIEGDMFQF---I--- 71 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~-~-------~~~~~a~~-------~~~~~~~~~d~~~~---~--- 71 (180)
..++.+|||+|||+|..+..+++. +.+++++|+ + .+++.+++ ..+++++++|..+. .
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~ 158 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKT 158 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhcc
Confidence 445689999999999999999886 668999999 5 55665543 24599999998652 2
Q ss_pred -CCccEEEecccccc
Q 030291 72 -PPSDAFFFKTVFHF 85 (180)
Q Consensus 72 -~~~D~v~~~~~l~~ 85 (180)
..||+|++.-++.+
T Consensus 159 ~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 159 QGKPDIVYLDPMYPE 173 (258)
T ss_dssp HCCCSEEEECCCC--
T ss_pred CCCccEEEECCCCCC
Confidence 46999999766554
No 275
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.49 E-value=1.3e-06 Score=66.12 Aligned_cols=84 Identities=14% Similarity=0.182 Sum_probs=63.7
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCCCCCeeEEecCCcccCC---CccEEEeccccccCChH
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYIEGDMFQFIP---PSDAFFFKTVFHFFDDE 89 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~d~~~~~~---~~D~v~~~~~l~~~~~~ 89 (180)
++++.++||+||++|.++..+++. +.+++++|..++-......+++++.+.|.+...+ .+|+|+|-.+.. +
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~~----p 282 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVEK----P 282 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCSSC----H
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCCCC----h
Confidence 578999999999999999999988 6789999986655555557899999999976332 599999976643 3
Q ss_pred HHHHHHHHHHHhhcc
Q 030291 90 DCLKLLKKCREAIAS 104 (180)
Q Consensus 90 ~~~~~l~~~~~~L~p 104 (180)
. ..+..+.++|..
T Consensus 283 ~--~~~~l~~~wl~~ 295 (375)
T 4auk_A 283 A--KVAALMAQWLVN 295 (375)
T ss_dssp H--HHHHHHHHHHHT
T ss_pred H--HhHHHHHHHHhc
Confidence 3 334445555544
No 276
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=98.49 E-value=1e-06 Score=66.37 Aligned_cols=144 Identities=12% Similarity=0.110 Sum_probs=100.7
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC---------------------------CCCeeEEecC
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ---------------------------TDNLKYIEGD 66 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~---------------------------~~~~~~~~~d 66 (180)
.+...|+.+|||......++...+++.+++-+|.|++++..++ ..+..++..|
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 4568899999999999999988777888999998775444432 2678899999
Q ss_pred Cccc-----------C-CCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhh-hhhc
Q 030291 67 MFQF-----------I-PPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTE-SKLL 133 (180)
Q Consensus 67 ~~~~-----------~-~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~ 133 (180)
+.+. . ....++++-+++.|++.+....+++.+.+.. | +|.+++.+...+....+. ... ....
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~---~~~~v~~e~i~~~~~~~~-fg~~m~~~ 250 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-S---HGLWISYDPIGGSQPNDR-FGAIMQSN 250 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-S---SEEEEEEEECCCCSTTCC-HHHHHHHH
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-C---CcEEEEEeccCCCCCcch-HHHHHHHH
Confidence 8651 1 1377899999999999999999999999987 5 688888888766222211 111 0000
Q ss_pred cce-eeEeecC-CcccCHHHHHHHHHHcCCe
Q 030291 134 FDI-FMNFNVG-GKERTEQEWGSLFVNAGFT 162 (180)
Q Consensus 134 ~~~-~~~~~~~-~~~~~~~~~~~~l~~aGf~ 162 (180)
... ......+ ..+.+.++..+.|.++||+
T Consensus 251 l~~~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 251 LKESRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHHHHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred hhcccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 000 0000011 1345889999999999997
No 277
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.48 E-value=1.1e-07 Score=73.03 Aligned_cols=92 Identities=12% Similarity=0.047 Sum_probs=69.3
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCC-CeEEEeeCch-hhccCCC-------CCC-eeEEecCCcccC-----CCccEEEe
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPG-IKCTVLDLPH-AVTDMPQ-------TDN-LKYIEGDMFQFI-----PPSDAFFF 79 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~-~~~~~~D~~~-~~~~a~~-------~~~-~~~~~~d~~~~~-----~~~D~v~~ 79 (180)
++.+|||++||+|.++..++....+ .+++++|+++ +++.+++ ..+ +++.++|+.+.. ..||+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 5689999999999999999987655 5799999955 7777764 233 899999985522 25999998
Q ss_pred ccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 80 KTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
.- . .... .++..+.+.|++ ||.++++.
T Consensus 132 DP-~---g~~~--~~l~~a~~~Lk~---gGll~~t~ 158 (392)
T 3axs_A 132 DP-F---GTPV--PFIESVALSMKR---GGILSLTA 158 (392)
T ss_dssp CC-S---SCCH--HHHHHHHHHEEE---EEEEEEEE
T ss_pred CC-C---cCHH--HHHHHHHHHhCC---CCEEEEEe
Confidence 54 1 1122 679999999999 77666654
No 278
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.45 E-value=1e-06 Score=65.76 Aligned_cols=103 Identities=11% Similarity=0.013 Sum_probs=68.9
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHC-CCCeEEEeeCch-hhccCCC------CCCeeEEecCCcccC------CCccEEE
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAF-PGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQFI------PPSDAFF 78 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~~------~~~D~v~ 78 (180)
..++.+|||+|||+|..+..+++.. +..+++++|+++ +++.+++ ..++++.++|+.+.. ..||.|+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 4677899999999999999998874 457899999965 7776654 357999999985521 3599999
Q ss_pred ec------cccccCChH----------------HHHHHHHHHHHhhccCCCCcEEEEEEeeeC
Q 030291 79 FK------TVFHFFDDE----------------DCLKLLKKCREAIASNGERGKVLIIDIVID 119 (180)
Q Consensus 79 ~~------~~l~~~~~~----------------~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~ 119 (180)
+. +++..-++. .+.++|+.+.+++ + ||.++.+.....
T Consensus 180 ~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l-~---gG~lvYsTCs~~ 238 (309)
T 2b9e_A 180 LDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFP-S---LQRLVYSTCSLC 238 (309)
T ss_dssp ECCCCCC------------------CCHHHHHHHHHHHHHHHTTCT-T---CCEEEEEESCCC
T ss_pred EcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhcc-C---CCEEEEECCCCC
Confidence 72 233221111 1234666776666 4 587777665443
No 279
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.44 E-value=1.5e-07 Score=76.24 Aligned_cols=89 Identities=16% Similarity=0.209 Sum_probs=62.9
Q ss_pred CCeEEEeCCcccHHHHHHHHH---C-CCCeEEEeeCchhhccCCC-------CCCeeEEecCCcc-cCC-CccEEEeccc
Q 030291 16 LRSMVDVGGGTGAFARIISEA---F-PGIKCTVLDLPHAVTDMPQ-------TDNLKYIEGDMFQ-FIP-PSDAFFFKTV 82 (180)
Q Consensus 16 ~~~iLdiG~G~G~~~~~l~~~---~-~~~~~~~~D~~~~~~~a~~-------~~~~~~~~~d~~~-~~~-~~D~v~~~~~ 82 (180)
...|||||||+|.++.+.++. . ..++++++|-+.+...+++ .++|+++++|+.+ .+| ++|+|++-.+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEwM 437 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELL 437 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECCCC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEEcC
Confidence 457999999999985544333 2 2347899998776656654 6789999999976 455 5999998544
Q ss_pred cccCChHHHHHHHHHHHHhhcc
Q 030291 83 FHFFDDEDCLKLLKKCREAIAS 104 (180)
Q Consensus 83 l~~~~~~~~~~~l~~~~~~L~p 104 (180)
=..+..+...++|....+.|||
T Consensus 438 G~fLl~E~mlevL~Ardr~LKP 459 (637)
T 4gqb_A 438 GSFADNELSPECLDGAQHFLKD 459 (637)
T ss_dssp BTTBGGGCHHHHHHHHGGGEEE
T ss_pred cccccccCCHHHHHHHHHhcCC
Confidence 3333334444667777899999
No 280
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.41 E-value=5.6e-07 Score=74.17 Aligned_cols=101 Identities=10% Similarity=0.058 Sum_probs=68.4
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHC------------------------------------------CCCeEEEeeCch-
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAF------------------------------------------PGIKCTVLDLPH- 49 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~------------------------------------------~~~~~~~~D~~~- 49 (180)
+++..++||.+||+|.++...+... +..+++|+|++.
T Consensus 188 ~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~ 267 (703)
T 3v97_A 188 WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDAR 267 (703)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHH
T ss_pred CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHH
Confidence 5677899999999999988766541 235799999955
Q ss_pred hhccCCC-------CCCeeEEecCCccc-CC----CccEEEecccc--ccCChHHHHHHHHHHHHh---hccCCCCcEEE
Q 030291 50 AVTDMPQ-------TDNLKYIEGDMFQF-IP----PSDAFFFKTVF--HFFDDEDCLKLLKKCREA---IASNGERGKVL 112 (180)
Q Consensus 50 ~~~~a~~-------~~~~~~~~~d~~~~-~~----~~D~v~~~~~l--~~~~~~~~~~~l~~~~~~---L~p~~~~G~~~ 112 (180)
+++.|+. ...+++.++|+.+. .+ .+|+|+++=-. ..-.......+.+.+.+. +.| ||.++
T Consensus 268 av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~---g~~~~ 344 (703)
T 3v97_A 268 VIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFG---GWNLS 344 (703)
T ss_dssp HHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCT---TCEEE
T ss_pred HHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCC---CCeEE
Confidence 8888874 34589999999652 12 69999997322 212223333555555544 447 89888
Q ss_pred EEEe
Q 030291 113 IIDI 116 (180)
Q Consensus 113 ~~~~ 116 (180)
+...
T Consensus 345 ilt~ 348 (703)
T 3v97_A 345 LFSA 348 (703)
T ss_dssp EEES
T ss_pred EEeC
Confidence 8754
No 281
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.30 E-value=6e-07 Score=71.90 Aligned_cols=101 Identities=13% Similarity=0.064 Sum_probs=70.6
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCC------------------CCeEEEeeCch-hhccCCC------CCC-----eeEE
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFP------------------GIKCTVLDLPH-AVTDMPQ------TDN-----LKYI 63 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~------------------~~~~~~~D~~~-~~~~a~~------~~~-----~~~~ 63 (180)
.++.+|+|.+||+|.++..+.+... ...++|+|++. ++..|+. ... ..+.
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeE
Confidence 4567999999999999887765421 24799999955 6666542 222 7788
Q ss_pred ecCCccc----CCCccEEEeccccccCCh------------HHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 64 EGDMFQF----IPPSDAFFFKTVFHFFDD------------EDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 64 ~~d~~~~----~~~~D~v~~~~~l~~~~~------------~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
++|.+.. ...||+|+++=.+..... .....++..+.+.|+| ||++.++-+.
T Consensus 248 ~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~---gGr~a~V~p~ 314 (541)
T 2ar0_A 248 LGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHP---GGRAAVVVPD 314 (541)
T ss_dssp ESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEE---EEEEEEEEEH
T ss_pred eCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCC---CCEEEEEecC
Confidence 9998652 347999999644332211 1122689999999999 8988887653
No 282
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.30 E-value=4.5e-07 Score=69.94 Aligned_cols=64 Identities=13% Similarity=0.227 Sum_probs=52.2
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----C----CCeeEEecCCcccC-----CCccEEEec
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----T----DNLKYIEGDMFQFI-----PPSDAFFFK 80 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----~----~~~~~~~~d~~~~~-----~~~D~v~~~ 80 (180)
++.+|||+|||+|..+..+++. +.+++++|.++ +++.++. . .+++++++|+.+.+ ..||+|++.
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 4789999999999999988877 56899999966 8887764 1 47999999997631 369999983
No 283
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.29 E-value=3.8e-07 Score=66.26 Aligned_cols=87 Identities=18% Similarity=0.315 Sum_probs=58.5
Q ss_pred ccCC--CeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-h-------hccCCC-----C---CCeeEEecCCcccC---
Q 030291 13 FQGL--RSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-A-------VTDMPQ-----T---DNLKYIEGDMFQFI--- 71 (180)
Q Consensus 13 ~~~~--~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~-------~~~a~~-----~---~~~~~~~~d~~~~~--- 71 (180)
++++ .+|||++||+|..+..++.. +++++++|.++ + ++.++. . .+++++++|..+.+
T Consensus 84 l~~g~~~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~ 161 (258)
T 2oyr_A 84 IKGDYLPDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDI 161 (258)
T ss_dssp CBTTBCCCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTC
T ss_pred ccCCCCCEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhC
Confidence 4556 89999999999999999998 56899999965 3 333221 1 47899999986522
Q ss_pred -CCccEEEeccccccCChHHHHHHHHHHHHhhcc
Q 030291 72 -PPSDAFFFKTVFHFFDDEDCLKLLKKCREAIAS 104 (180)
Q Consensus 72 -~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p 104 (180)
..||+|++.-++.+-. .. ..+++..+.|++
T Consensus 162 ~~~fDvV~lDP~y~~~~-~s--aavkk~~~~lr~ 192 (258)
T 2oyr_A 162 TPRPQVVYLDPMFPHKQ-KS--ALVKKEMRVFQS 192 (258)
T ss_dssp SSCCSEEEECCCCCCCC-C-------HHHHHHHH
T ss_pred cccCCEEEEcCCCCCcc-cc--hHHHHHHHHHHH
Confidence 2599999976665432 22 345555555555
No 284
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.22 E-value=1.5e-06 Score=70.83 Aligned_cols=93 Identities=17% Similarity=0.152 Sum_probs=63.2
Q ss_pred CCeEEEeCCcccHHHHHHHHH----C---------CCCeEEEeeCch-hhccCC-----C-CCCeeEEecCCcc-cC---
Q 030291 16 LRSMVDVGGGTGAFARIISEA----F---------PGIKCTVLDLPH-AVTDMP-----Q-TDNLKYIEGDMFQ-FI--- 71 (180)
Q Consensus 16 ~~~iLdiG~G~G~~~~~l~~~----~---------~~~~~~~~D~~~-~~~~a~-----~-~~~~~~~~~d~~~-~~--- 71 (180)
...|||||||+|.++.+.+.. . ...+++++|.+. +....+ . ..+|+++.+|+.+ ..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 457999999999997543222 1 234899999865 222222 1 5779999999976 23
Q ss_pred ----CCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEE
Q 030291 72 ----PPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKV 111 (180)
Q Consensus 72 ----~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~ 111 (180)
..+|+|++-.+=....++...+.|..+.+.|+| ||.+
T Consensus 490 ~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp---~Gi~ 530 (745)
T 3ua3_A 490 DRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKP---TTIS 530 (745)
T ss_dssp HTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCT---TCEE
T ss_pred cCCCCcccEEEEeccccccchhccHHHHHHHHHhCCC---CcEE
Confidence 369999996653333444455778888899999 6543
No 285
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.15 E-value=1.4e-05 Score=58.51 Aligned_cols=99 Identities=12% Similarity=0.127 Sum_probs=64.1
Q ss_pred cccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----CCCeeEEec--CCcc-cCCCccEEEecccc
Q 030291 12 IFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----TDNLKYIEG--DMFQ-FIPPSDAFFFKTVF 83 (180)
Q Consensus 12 ~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----~~~~~~~~~--d~~~-~~~~~D~v~~~~~l 83 (180)
.+.++.+||||||++|.++..+++..+-.++.++|+.. +...... ..++..... |+.. ....+|+|++..+.
T Consensus 78 l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~AP 157 (300)
T 3eld_A 78 YLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIGE 157 (300)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEeecCcC
Confidence 36788999999999999999999876555788999853 3222111 123332222 3322 22369999997666
Q ss_pred ccCCh-----HHHHHHHHHHHHhhccCCCC-cEEEEE
Q 030291 84 HFFDD-----EDCLKLLKKCREAIASNGER-GKVLII 114 (180)
Q Consensus 84 ~~~~~-----~~~~~~l~~~~~~L~p~~~~-G~~~~~ 114 (180)
+ ... .....+|.-+.++|+| | |.+++-
T Consensus 158 n-sG~~~~D~~rs~~LL~~A~~~Lkp---G~G~FV~K 190 (300)
T 3eld_A 158 S-SSNPLVERDRTMKVLENFERWKHV---NTENFCVK 190 (300)
T ss_dssp C-CSSHHHHHHHHHHHHHHHHHHCCT---TCCEEEEE
T ss_pred C-CCCHHHHHHHHHHHHHHHHHHhcC---CCCcEEEE
Confidence 5 322 2223567777899999 7 777664
No 286
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.15 E-value=1.2e-05 Score=56.07 Aligned_cols=90 Identities=13% Similarity=0.191 Sum_probs=61.7
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC---------CCCeeEEecCCccc------------
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ---------TDNLKYIEGDMFQF------------ 70 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~---------~~~~~~~~~d~~~~------------ 70 (180)
+.++++|||+||| ..+..+++ .++.+++.+|..+ ..+.+++ ..+++++.+|..+.
T Consensus 28 l~~a~~VLEiGtG--ySTl~lA~-~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 28 YEEAEVILEYGSG--GSTVVAAE-LPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HHHCSEEEEESCS--HHHHHHHT-STTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred hhCCCEEEEECch--HHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhh
Confidence 5678899999984 56666665 3478999999844 6666553 34789999985321
Q ss_pred ---------------CCCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 71 ---------------IPPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 71 ---------------~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
...||+|+.-+-.. ...+..+.+.|+| ||.+ +.|.
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~k~-------~~~~~~~l~~l~~---GG~I-v~DN 154 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGRFR-------VGCALATAFSITR---PVTL-LFDD 154 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSSSH-------HHHHHHHHHHCSS---CEEE-EETT
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCCCc-------hhHHHHHHHhcCC---CeEE-EEeC
Confidence 13599999966421 2556667799999 5555 5553
No 287
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=98.14 E-value=8.4e-05 Score=55.87 Aligned_cols=149 Identities=13% Similarity=0.127 Sum_probs=101.7
Q ss_pred CCCeEEEeCCcccHHHHHHHHH-CCCCeEEEeeCchhhccCC-----------------------------CCCCeeEEe
Q 030291 15 GLRSMVDVGGGTGAFARIISEA-FPGIKCTVLDLPHAVTDMP-----------------------------QTDNLKYIE 64 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~-~~~~~~~~~D~~~~~~~a~-----------------------------~~~~~~~~~ 64 (180)
+...|+-+|||.-....++... .++.+++-+|.|++++.-+ ...+..++.
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 4678999999998888887765 3578899999887443321 136778888
Q ss_pred cCCccc------------CC-CccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhh
Q 030291 65 GDMFQF------------IP-PSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESK 131 (180)
Q Consensus 65 ~d~~~~------------~~-~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~ 131 (180)
.|+.+. .+ ..-++++-+++.|++......+++.+.+...+ |.+++.+...+.......+....
T Consensus 170 ~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~~----~~~i~yE~i~p~d~fg~~M~~~l 245 (334)
T 3iei_A 170 ADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFER----AMFINYEQVNMGDRFGQIMIENL 245 (334)
T ss_dssp CCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSS----EEEEEEEECCTTSHHHHHHHHHH
T ss_pred cccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCCC----ceEEEEeccCCCCHHHHHHHHHH
Confidence 998651 11 25588889999999999989999999988765 88888888755432211111111
Q ss_pred hccceeeEeecC-CcccCHHHHHHHHHHcCCeEEEEeecC
Q 030291 132 LLFDIFMNFNVG-GKERTEQEWGSLFVNAGFTHYKIAPIF 170 (180)
Q Consensus 132 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~aGf~~~~~~~~~ 170 (180)
...... ..+ ..+.+.++..+.|.++||+.++..+..
T Consensus 246 ~~~g~p---l~sl~~y~t~~~~~~r~~~~Gw~~~~~~d~~ 282 (334)
T 3iei_A 246 RRRQCD---LAGVETCKSLESQKERLLSNGWETASAVDMM 282 (334)
T ss_dssp HTTTCC---CTTGGGGGCHHHHHHHHHTTTCSEEEEEEHH
T ss_pred HHhCCC---CcccccCCCHHHHHHHHHHcCCCcceeecHH
Confidence 111100 011 134578889999999999988776553
No 288
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.11 E-value=1.2e-05 Score=57.78 Aligned_cols=104 Identities=17% Similarity=0.161 Sum_probs=62.1
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchh--hccCC-CCCCe---eEEec-CCcccCC-CccE
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHA--VTDMP-QTDNL---KYIEG-DMFQFIP-PSDA 76 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~--~~~a~-~~~~~---~~~~~-d~~~~~~-~~D~ 76 (180)
|.+++ .++++.+|+|+||+.|.++...++...-..+.+.++.-. +.... ...++ ++.++ |+.+..+ .+|+
T Consensus 65 IdeK~--likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~~~~~~Dv 142 (269)
T 2px2_A 65 LVERR--FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYKPSEISDT 142 (269)
T ss_dssp HHHTT--SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGSCCCCCSE
T ss_pred HHHcC--CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCccCCCCCCCCE
Confidence 44454 388999999999999999998877521112234443221 11111 11344 45557 9976433 6999
Q ss_pred EEeccccccCCh-----HHHHHHHHHHHHhhccCCCCc-EEEEE
Q 030291 77 FFFKTVFHFFDD-----EDCLKLLKKCREAIASNGERG-KVLII 114 (180)
Q Consensus 77 v~~~~~l~~~~~-----~~~~~~l~~~~~~L~p~~~~G-~~~~~ 114 (180)
|+|-..-. ... .....+|.-+.++|+| || .+++-
T Consensus 143 VLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~---gG~~FvvK 182 (269)
T 2px2_A 143 LLCDIGES-SPSAEIEEQRTLRILEMVSDWLSR---GPKEFCIK 182 (269)
T ss_dssp EEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTT---CCSEEEEE
T ss_pred EEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhc---CCcEEEEE
Confidence 99855432 222 1122357777799999 78 56663
No 289
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.09 E-value=1.9e-06 Score=79.56 Aligned_cols=142 Identities=15% Similarity=0.151 Sum_probs=66.7
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCC-----CCeEEEeeCch-hhccCCCC---CCeeEEecCCccc----CCCccEEEecc
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFP-----GIKCTVLDLPH-AVTDMPQT---DNLKYIEGDMFQF----IPPSDAFFFKT 81 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~-----~~~~~~~D~~~-~~~~a~~~---~~~~~~~~d~~~~----~~~~D~v~~~~ 81 (180)
+..+|||||.|+|..+..+++... ..+|+..|++. ..+.+++. -.++....|..++ ...||+|++..
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~ 1319 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNC 1319 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEEC
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEcc
Confidence 456999999999988777766642 23688999965 66666642 1222222233222 23599999999
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCC
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGF 161 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 161 (180)
++|-.++.. ..|+++++.|+| ||.+++.+...... +.......... ........+.++|.++|.++||
T Consensus 1320 vl~~t~~~~--~~l~~~~~lL~p---~G~l~~~e~~~~~~-----~g~~~~~~~~~--~r~~~~~~~~~~w~~~l~~~gf 1387 (2512)
T 2vz8_A 1320 ALATLGDPA--VAVGNMAATLKE---GGFLLLHTLLAGHP-----LGEMVGFLTSP--EQGGRHLLSQDQWESLFAGASL 1387 (2512)
T ss_dssp C-------------------------CCEEEEEEC---------------------------------CTTTTSSTTTTE
T ss_pred cccccccHH--HHHHHHHHhcCC---CcEEEEEecccccc-----ccccccccccc--cccCCcccCHHHHHHHHHhCCC
Confidence 998777776 679999999999 99988876432110 00000000000 0011234567889999999999
Q ss_pred eEEEEee
Q 030291 162 THYKIAP 168 (180)
Q Consensus 162 ~~~~~~~ 168 (180)
..+....
T Consensus 1388 ~~~~~~~ 1394 (2512)
T 2vz8_A 1388 HLVALKR 1394 (2512)
T ss_dssp EEEEEEE
T ss_pred ceeeecc
Confidence 9876643
No 290
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.08 E-value=3e-05 Score=64.27 Aligned_cols=101 Identities=11% Similarity=0.061 Sum_probs=68.2
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCC---CCeEEEeeCch-hhccC--CC----------CCCeeEEecCCcc----cCCC
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFP---GIKCTVLDLPH-AVTDM--PQ----------TDNLKYIEGDMFQ----FIPP 73 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~---~~~~~~~D~~~-~~~~a--~~----------~~~~~~~~~d~~~----~~~~ 73 (180)
+++.+|||.|||+|.+...+++..+ ..+++|+|+.+ ++..| +. .....+...|+.. ....
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 4578999999999999999988764 35799999954 65555 10 1223455666654 2346
Q ss_pred ccEEEecccc--ccCChH-------------------------HHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 74 SDAFFFKTVF--HFFDDE-------------------------DCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 74 ~D~v~~~~~l--~~~~~~-------------------------~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
||+|+++=-. ..-.+. ....++..+.+.|++ ||.+.+.-+.
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKp---GGrLAfIlP~ 467 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQD---GTVISAIMPK 467 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCT---TCEEEEEEET
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCC---CcEEEEEECh
Confidence 9999995332 111111 122478889999999 8998887654
No 291
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.08 E-value=1.6e-05 Score=56.28 Aligned_cols=103 Identities=13% Similarity=0.107 Sum_probs=69.1
Q ss_pred cccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhcc------CCCCCCeeEEec-CCcc-cCCCcc
Q 030291 4 LLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTD------MPQTDNLKYIEG-DMFQ-FIPPSD 75 (180)
Q Consensus 4 ~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~------a~~~~~~~~~~~-d~~~-~~~~~D 75 (180)
.+.+.+. +.+..+|+||||++|.++...+....-.++.++|+..+-.. ...-..++|..+ |+.. +...+|
T Consensus 69 ei~ek~~--l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~~~~D 146 (267)
T 3p8z_A 69 WFVERNM--VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPPEKCD 146 (267)
T ss_dssp HHHHTTS--SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCCCCCS
T ss_pred HHHHhcC--CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCCcccc
Confidence 3455555 78888999999999999997777764557999998432111 112578899998 8744 223599
Q ss_pred EEEeccccccCChH--H---HHHHHHHHHHhhccCCCCcEEEE
Q 030291 76 AFFFKTVFHFFDDE--D---CLKLLKKCREAIASNGERGKVLI 113 (180)
Q Consensus 76 ~v~~~~~l~~~~~~--~---~~~~l~~~~~~L~p~~~~G~~~~ 113 (180)
.|+|-..- .-+++ + ...+|+-+.++|++ |-+++
T Consensus 147 tllcDIge-Ss~~~~vE~~RtlrvLela~~wL~~----~~fc~ 184 (267)
T 3p8z_A 147 TLLCDIGE-SSPSPTVEESRTIRVLKMVEPWLKN----NQFCI 184 (267)
T ss_dssp EEEECCCC-CCSCHHHHHHHHHHHHHHHGGGCSS----CEEEE
T ss_pred EEEEecCC-CCCChhhhhhHHHHHHHHHHHhccc----CCEEE
Confidence 99995443 22221 1 12366777899987 55555
No 292
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.07 E-value=5.4e-06 Score=63.07 Aligned_cols=96 Identities=14% Similarity=0.078 Sum_probs=68.0
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC--------------CCCeeEEecCCccc-------C
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ--------------TDNLKYIEGDMFQF-------I 71 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~--------------~~~~~~~~~d~~~~-------~ 71 (180)
.++++||=||.|.|..++.+++.. ..+++.+|+.+ +++.+++ .++++++..|.... .
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLK-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTC-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCeEEEECCCcHHHHHHHHhcC-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 457899999999999999998865 47999999954 7776653 24688889988542 2
Q ss_pred CCccEEEecccc-------ccCC-hHHHHHHHHHHHHhhccCCCCcEEEE
Q 030291 72 PPSDAFFFKTVF-------HFFD-DEDCLKLLKKCREAIASNGERGKVLI 113 (180)
Q Consensus 72 ~~~D~v~~~~~l-------~~~~-~~~~~~~l~~~~~~L~p~~~~G~~~~ 113 (180)
..||+|+.-..- .... ..-..++++.++++|+| ||.++.
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p---~GVlv~ 329 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQ---DGKYFT 329 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEE---EEEEEE
T ss_pred CceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCC---CCEEEE
Confidence 369999974221 1111 11234789999999999 555544
No 293
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=98.03 E-value=1.1e-05 Score=60.04 Aligned_cols=145 Identities=12% Similarity=0.097 Sum_probs=91.0
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC---------CCCeeEEecCCcccC-----------CCc
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ---------TDNLKYIEGDMFQFI-----------PPS 74 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~---------~~~~~~~~~d~~~~~-----------~~~ 74 (180)
+...|++||||.-.....+.. .++.+++-+|.|.++...++ ..+..++..|+.+.+ ...
T Consensus 102 g~~QvV~LGaGlDTra~Rl~~-~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~P 180 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLDW-PTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSAR 180 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSCC-CTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSC
T ss_pred CCCeEEEeCCCCCchhhhccC-CCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCCC
Confidence 456799999999877655531 23578999998775554432 457788889986511 124
Q ss_pred cEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCch-hhhhhh-hccceee--E-ee-cCCccc-
Q 030291 75 DAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDR-ELTESK-LLFDIFM--N-FN-VGGKER- 147 (180)
Q Consensus 75 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~--~-~~-~~~~~~- 147 (180)
-++++-++++|+++.....+++.+.+.+.| |..++.+...++..... ...... ....... . .. .+...+
T Consensus 181 t~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~----gs~l~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 256 (310)
T 2uyo_A 181 TAWLAEGLLMYLPATAQDGLFTEIGGLSAV----GSRIAVETSPLHGDEWREQMQLRFRRVSDALGFEQAVDVQELIYHD 256 (310)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHTCCT----TCEEEEECCCTTCSHHHHHHHHHHHHHHC-----------CCTTCC
T ss_pred EEEEEechHhhCCHHHHHHHHHHHHHhCCC----CeEEEEEecCCCCcchhHHHHHHHHHHHHHcCCcCCCCccccccCC
Confidence 578889999999998888999999999888 55555555444321110 000000 0111111 0 00 122222
Q ss_pred C-HHHHHHHHHHcCCeEE
Q 030291 148 T-EQEWGSLFVNAGFTHY 164 (180)
Q Consensus 148 ~-~~~~~~~l~~aGf~~~ 164 (180)
+ .++..+.|.+.||+.+
T Consensus 257 ~~~~~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 257 ENRAVVADWLNRHGWRAT 274 (310)
T ss_dssp TTCCCHHHHHTTTTEEEE
T ss_pred CChHHHHHHHHHCcCccc
Confidence 5 7899999999999987
No 294
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.95 E-value=8.8e-06 Score=59.42 Aligned_cols=75 Identities=20% Similarity=0.152 Sum_probs=58.2
Q ss_pred cccccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC--CCCeeEEecCCccc--------
Q 030291 2 ATLLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ--TDNLKYIEGDMFQF-------- 70 (180)
Q Consensus 2 ~~~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~--~~~~~~~~~d~~~~-------- 70 (180)
.+++++.+. ++++..++|.+||.|..+..+++. +.+++++|.++ +++.+++ ..+++++++++.+-
T Consensus 11 l~e~le~L~--~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~~~g 86 (285)
T 1wg8_A 11 YQEALDLLA--VRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALG 86 (285)
T ss_dssp HHHHHHHHT--CCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTT
T ss_pred HHHHHHhhC--CCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHHHcC
Confidence 455666666 678889999999999999999998 67999999954 7655542 25899999999541
Q ss_pred CCCccEEEec
Q 030291 71 IPPSDAFFFK 80 (180)
Q Consensus 71 ~~~~D~v~~~ 80 (180)
...+|.|++.
T Consensus 87 ~~~vDgIL~D 96 (285)
T 1wg8_A 87 VERVDGILAD 96 (285)
T ss_dssp CSCEEEEEEE
T ss_pred CCCcCEEEeC
Confidence 1358998874
No 295
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.92 E-value=6.3e-05 Score=55.03 Aligned_cols=103 Identities=11% Similarity=0.154 Sum_probs=66.9
Q ss_pred ccccccccccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchh-hcc---CCC--CCCeeEEec-CCcc-cCCCccE
Q 030291 5 LVKDCRPIFQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHA-VTD---MPQ--TDNLKYIEG-DMFQ-FIPPSDA 76 (180)
Q Consensus 5 l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~-~~~---a~~--~~~~~~~~~-d~~~-~~~~~D~ 76 (180)
+.+.+. +.+..+||||||++|.++...+....-.++.++|+... -+. .++ ..-+.+... |+.. ....+|+
T Consensus 86 i~~~~~--l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~~~~D~ 163 (321)
T 3lkz_A 86 LVERRF--LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPSECCDT 163 (321)
T ss_dssp HHHTTS--CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCCCCCSE
T ss_pred HHHhcC--CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCCCCCCE
Confidence 445555 77888999999999999997776654457999998432 110 111 234777776 7643 2235999
Q ss_pred EEeccccccCChHH-----HHHHHHHHHHhhccCCCC-cEEEE
Q 030291 77 FFFKTVFHFFDDED-----CLKLLKKCREAIASNGER-GKVLI 113 (180)
Q Consensus 77 v~~~~~l~~~~~~~-----~~~~l~~~~~~L~p~~~~-G~~~~ 113 (180)
|+|--. +.-+++. ...+|.-+.++|++ + |-+++
T Consensus 164 ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~---~~~~f~~ 202 (321)
T 3lkz_A 164 LLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHR---GPREFCV 202 (321)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTT---CCCEEEE
T ss_pred EEEECc-cCCCChhhhhhHHHHHHHHHHHHhcc---CCCcEEE
Confidence 998555 4444322 12367777899998 5 65555
No 296
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.91 E-value=3.6e-05 Score=61.60 Aligned_cols=99 Identities=11% Similarity=0.070 Sum_probs=70.0
Q ss_pred CCCeEEEeCCcccHHHHHHHHHC---CCCeEEEeeCch-hhccCCC------C--CCeeEEecCCccc------CCCccE
Q 030291 15 GLRSMVDVGGGTGAFARIISEAF---PGIKCTVLDLPH-AVTDMPQ------T--DNLKYIEGDMFQF------IPPSDA 76 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~---~~~~~~~~D~~~-~~~~a~~------~--~~~~~~~~d~~~~------~~~~D~ 76 (180)
.+.+|+|.+||+|.+...+.+.. +...++|+|+.. +...|+. . .++.+.++|.+.. ...||+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 56799999999999988887774 357899999954 6665542 1 4678899998753 125999
Q ss_pred EEecccc--cc-----------------CC---hHHHHHHHHHHHHhhc-cCCCCcEEEEEEee
Q 030291 77 FFFKTVF--HF-----------------FD---DEDCLKLLKKCREAIA-SNGERGKVLIIDIV 117 (180)
Q Consensus 77 v~~~~~l--~~-----------------~~---~~~~~~~l~~~~~~L~-p~~~~G~~~~~~~~ 117 (180)
|+++=-+ .. ++ +.. -.++..+.+.|+ | ||++.++-+.
T Consensus 301 IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~-~~Fl~~~l~~Lk~~---gGr~a~VlP~ 360 (542)
T 3lkd_A 301 VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKAD-FAFLLHGYYHLKQD---NGVMAIVLPH 360 (542)
T ss_dssp EEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCH-HHHHHHHHHTBCTT---TCEEEEEEET
T ss_pred EEecCCcCCccccchhhhhhhhhhhhhhcCCCchhh-HHHHHHHHHHhCCC---ceeEEEEecc
Confidence 9985111 10 11 011 148999999999 9 8998887653
No 297
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.85 E-value=3.8e-06 Score=67.25 Aligned_cols=97 Identities=12% Similarity=0.039 Sum_probs=64.2
Q ss_pred CeEEEeCCcccHHHHHHHHHCC---------------CCeEEEeeCch-hhccCCC-------CCCeeEEecCCcccC--
Q 030291 17 RSMVDVGGGTGAFARIISEAFP---------------GIKCTVLDLPH-AVTDMPQ-------TDNLKYIEGDMFQFI-- 71 (180)
Q Consensus 17 ~~iLdiG~G~G~~~~~l~~~~~---------------~~~~~~~D~~~-~~~~a~~-------~~~~~~~~~d~~~~~-- 71 (180)
.+|+|.+||+|.+...+.+... ...++|+|+.. +...|+. ..++.+.++|.+...
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 4999999999998777654321 45799999954 6666552 233444778875522
Q ss_pred --CCccEEEecccccc-------------------------CChH--HHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 72 --PPSDAFFFKTVFHF-------------------------FDDE--DCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 72 --~~~D~v~~~~~l~~-------------------------~~~~--~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
..||+|+++=-+.. ++.. ..-.++..+.+.|+| ||.+.++-+
T Consensus 326 ~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~---gGr~aiVlP 396 (544)
T 3khk_A 326 PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAP---TGSMALLLA 396 (544)
T ss_dssp TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEE---EEEEEEEEE
T ss_pred ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhcc---CceEEEEec
Confidence 36999998522221 1110 011589999999999 898887754
No 298
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.72 E-value=0.00073 Score=50.02 Aligned_cols=123 Identities=19% Similarity=0.196 Sum_probs=71.2
Q ss_pred CCeEEEeCCcccHHHHHH----HHHCCCCeE--EEeeCchh--hccCCC-----------------CCC--eeEEecCCc
Q 030291 16 LRSMVDVGGGTGAFARII----SEAFPGIKC--TVLDLPHA--VTDMPQ-----------------TDN--LKYIEGDMF 68 (180)
Q Consensus 16 ~~~iLdiG~G~G~~~~~l----~~~~~~~~~--~~~D~~~~--~~~a~~-----------------~~~--~~~~~~d~~ 68 (180)
.-+|||+|-|+|.+.... .+..|..++ +.+|.... ...... ..+ .++..+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 457999999999876543 244666555 55553110 000000 233 356678875
Q ss_pred cc---CC--CccEEEeccc-cccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeec
Q 030291 69 QF---IP--PSDAFFFKTV-FHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNV 142 (180)
Q Consensus 69 ~~---~~--~~D~v~~~~~-l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (180)
+. .. .+|+++.-.. -..-|+--...+++++++.++| ||. +.+
T Consensus 177 ~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~p---gg~-laT---------------------------- 224 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDE---KGY-WVS---------------------------- 224 (308)
T ss_dssp HHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEE---EEE-EEE----------------------------
T ss_pred HHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCC---CcE-EEE----------------------------
Confidence 42 22 5899887432 2222222244889999999999 544 331
Q ss_pred CCcccCHHHHHHHHHHcCCeEEEEeecCCce
Q 030291 143 GGKERTEQEWGSLFVNAGFTHYKIAPIFGIK 173 (180)
Q Consensus 143 ~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~ 173 (180)
+.....++..|+++||++.++--.++..
T Consensus 225 ---Ytaag~VRR~L~~aGF~V~k~~G~g~KR 252 (308)
T 3vyw_A 225 ---YSSSLSVRKSLLTLGFKVGSSREIGRKR 252 (308)
T ss_dssp ---SCCCHHHHHHHHHTTCEEEEEECC---C
T ss_pred ---EeCcHHHHHHHHHCCCEEEecCCCCCCC
Confidence 1123557788999999988877666543
No 299
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.58 E-value=0.0006 Score=49.97 Aligned_cols=94 Identities=14% Similarity=0.095 Sum_probs=60.6
Q ss_pred ccCCCeEEEeCC------cccHHHHHHHHHCCC-CeEEEeeCchhhccCCCCCCeeEEecCCcc--cCCCccEEEecccc
Q 030291 13 FQGLRSMVDVGG------GTGAFARIISEAFPG-IKCTVLDLPHAVTDMPQTDNLKYIEGDMFQ--FIPPSDAFFFKTVF 83 (180)
Q Consensus 13 ~~~~~~iLdiG~------G~G~~~~~l~~~~~~-~~~~~~D~~~~~~~a~~~~~~~~~~~d~~~--~~~~~D~v~~~~~l 83 (180)
.+.+.+|||+|+ .+|.. .+.+..|. ..++++|+.++...+ . .++++|... ....+|+|++-..-
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~sda----~-~~IqGD~~~~~~~~k~DLVISDMAP 179 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVSDA----D-STLIGDCATVHTANKWDLIISDMYD 179 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBCSS----S-EEEESCGGGEEESSCEEEEEECCCC
T ss_pred ecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccccCC----C-eEEEccccccccCCCCCEEEecCCC
Confidence 467899999996 66663 44555775 699999997644322 2 448898744 23469999983321
Q ss_pred ---ccCCh-H-----HHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 84 ---HFFDD-E-----DCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 84 ---~~~~~-~-----~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
.+... . -...++.-+.+.|+| ||.+++--+
T Consensus 180 NtTG~~D~d~~Rs~~L~ElALdfA~~~Lkp---GGsFvVKVF 218 (344)
T 3r24_A 180 PRTKHVTKENDSKEGFFTYLCGFIKQKLAL---GGSIAVKIT 218 (344)
T ss_dssp TTSCSSCSCCCCCCTHHHHHHHHHHHHEEE---EEEEEEEEC
T ss_pred CcCCccccchhHHHHHHHHHHHHHHHhCcC---CCEEEEEEe
Confidence 11111 1 244667778899999 777766443
No 300
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.55 E-value=0.00034 Score=51.32 Aligned_cols=94 Identities=11% Similarity=0.152 Sum_probs=64.3
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHC-----CCCeEEEeeCch-h--------------------------hccCCC-----
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAF-----PGIKCTVLDLPH-A--------------------------VTDMPQ----- 56 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~-----~~~~~~~~D~~~-~--------------------------~~~a~~----- 56 (180)
..+.+|||+|+..|..+..+++.. ++.+++++|.-+ + .+.+++
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 457899999999999888876553 477899999521 1 111221
Q ss_pred ---CCCeeEEecCCcccC-----CCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 57 ---TDNLKYIEGDMFQFI-----PPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 57 ---~~~~~~~~~d~~~~~-----~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
..+++++.+++.+.+ ..+|+|+.-.-.+ .. ....|+.+...|+| || ++++|
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y--~~--~~~~Le~~~p~L~p---GG-iIv~D 243 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY--ES--TWDTLTNLYPKVSV---GG-YVIVD 243 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH--HH--HHHHHHHHGGGEEE---EE-EEEES
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc--cc--HHHHHHHHHhhcCC---CE-EEEEc
Confidence 278999999996522 2599998865421 11 22679999999999 45 55544
No 301
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.46 E-value=0.00053 Score=52.07 Aligned_cols=109 Identities=12% Similarity=0.049 Sum_probs=76.0
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC------------CCCeeEEecCCcc----cCCCcc
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ------------TDNLKYIEGDMFQ----FIPPSD 75 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~------------~~~~~~~~~d~~~----~~~~~D 75 (180)
.+++.+|||+.+|.|.-+..+++..++..+++.|++. .+...++ ..++.+.+.|... ....||
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 4678899999999999999998887666899999854 4433321 3578888888754 123699
Q ss_pred EEEe----cc----cccc-------CCh-------HHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCc
Q 030291 76 AFFF----KT----VFHF-------FDD-------EDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDD 124 (180)
Q Consensus 76 ~v~~----~~----~l~~-------~~~-------~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~ 124 (180)
.|++ ++ ++.. ... ..+.++|.+..+.||| ||.++-+.......+.+
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkp---GG~LVYsTCSl~~~ENE 293 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKP---GGHVVYSTCSLSHLQNE 293 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEE---EEEEEEEESCCCTTTTH
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCC---CcEEEEEeCCCchhhCH
Confidence 9996 22 1111 111 1245789999999999 88888887766555444
No 302
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.38 E-value=0.0013 Score=54.17 Aligned_cols=148 Identities=11% Similarity=0.066 Sum_probs=98.3
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCC--------CCeEEEeeCchhhccCCC------------------------------
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFP--------GIKCTVLDLPHAVTDMPQ------------------------------ 56 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~--------~~~~~~~D~~~~~~~a~~------------------------------ 56 (180)
+...|+-+|||.-....++....+ +.+++-+|.|++++.-++
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLT 186 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHHHcChHHHHhhcccccccccccccccccc
Confidence 467899999999998888876644 677888888774433221
Q ss_pred CCCeeEEecCCccc-------------CCC-ccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCC
Q 030291 57 TDNLKYIEGDMFQF-------------IPP-SDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKE 122 (180)
Q Consensus 57 ~~~~~~~~~d~~~~-------------~~~-~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~ 122 (180)
..+..++..|+.+. .+. .-++++-+++.|++.+...++|+.+.+. + ++.+++.+...+...
T Consensus 187 s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~---~~~~~~~e~~~~~~~ 261 (695)
T 2zwa_A 187 TPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--E---NSHFIILEQLIPKGP 261 (695)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--S---SEEEEEEEECCTTCT
T ss_pred CCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--C---CceEEEEEeecCCCC
Confidence 13788889999651 122 4477888999999999988999988854 5 688888888766443
Q ss_pred Cchhhh---hhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEEEEeec
Q 030291 123 DDRELT---ESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHYKIAPI 169 (180)
Q Consensus 123 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 169 (180)
.+.... ......... + ..-....+.++..+.|.+.||+.+...+.
T Consensus 262 ~d~f~~~m~~~~~~~g~~-l-~~~~~~~~~~~~~~~~~~~Gw~~v~~~~~ 309 (695)
T 2zwa_A 262 FEPFSKQMLAHFKRNDSP-L-QSVLKYNTIESQVQRFNKLGFAYVNVGDM 309 (695)
T ss_dssp TSHHHHHHHHHHHHTTCC-C-CGGGTCCSHHHHHHHHHHTTCCEEEEEEH
T ss_pred CChHHHHHHHHHHHcCCC-C-CccccCCCHHHHHHHHHHCCCCCcceeeH
Confidence 332111 000000000 0 00113457899999999999987766544
No 303
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.32 E-value=8.8e-05 Score=56.16 Aligned_cols=55 Identities=13% Similarity=0.182 Sum_probs=42.5
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCC---CCCCeeEEecCCcc
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMP---QTDNLKYIEGDMFQ 69 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~---~~~~~~~~~~d~~~ 69 (180)
+...|||||.|.|.+|..|++.....+++++|+.. .+...+ ..++++++.+|++.
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~ 116 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYD 116 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTC
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCccc
Confidence 35889999999999999999874345799999843 433332 25789999999964
No 304
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.21 E-value=0.00049 Score=51.52 Aligned_cols=77 Identities=14% Similarity=0.132 Sum_probs=59.2
Q ss_pred cccccccccccccCCCeEEEeCCcccHHHHHHHHHC-CCCeEEEeeCch-hhccCCC--CCCeeEEecCCcc------c-
Q 030291 2 ATLLVKDCRPIFQGLRSMVDVGGGTGAFARIISEAF-PGIKCTVLDLPH-AVTDMPQ--TDNLKYIEGDMFQ------F- 70 (180)
Q Consensus 2 ~~~l~~~~~~~~~~~~~iLdiG~G~G~~~~~l~~~~-~~~~~~~~D~~~-~~~~a~~--~~~~~~~~~d~~~------~- 70 (180)
.+++++.+. .+++..++|..+|.|..+..+++.. |..+++++|..+ +++.+++ ..+++++++++.+ .
T Consensus 46 l~Evl~~L~--i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~~~L~~~ 123 (347)
T 3tka_A 46 LDEAVNGLN--IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAER 123 (347)
T ss_dssp THHHHHHTC--CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHHHHHHHT
T ss_pred HHHHHHhhC--CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHHhc
Confidence 456667776 7788999999999999999999884 778999999954 7776643 4688888888844 1
Q ss_pred -CC-CccEEEec
Q 030291 71 -IP-PSDAFFFK 80 (180)
Q Consensus 71 -~~-~~D~v~~~ 80 (180)
.. .+|.|+..
T Consensus 124 g~~~~vDgILfD 135 (347)
T 3tka_A 124 DLIGKIDGILLD 135 (347)
T ss_dssp TCTTCEEEEEEE
T ss_pred CCCCcccEEEEC
Confidence 11 47877764
No 305
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.00 E-value=0.0002 Score=52.95 Aligned_cols=41 Identities=15% Similarity=-0.001 Sum_probs=34.4
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ 56 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~ 56 (180)
.++..|||++||+|..+..+.+. +.+++++|+++ +++.+++
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~ 275 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKE 275 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHH
Confidence 46789999999999999998887 67899999965 7776653
No 306
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.54 E-value=0.0051 Score=49.15 Aligned_cols=101 Identities=15% Similarity=0.102 Sum_probs=62.5
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHC-------------CCCeEEEeeCch-hhccCCC------CCCeeEEecCCccc--
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAF-------------PGIKCTVLDLPH-AVTDMPQ------TDNLKYIEGDMFQF-- 70 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~-------------~~~~~~~~D~~~-~~~~a~~------~~~~~~~~~d~~~~-- 70 (180)
...+.+|+|-+||+|.+.....+.. ....++|+|+.. +...|+- .....+.++|.+..
T Consensus 215 p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~ 294 (530)
T 3ufb_A 215 PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPL 294 (530)
T ss_dssp CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCG
T ss_pred cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCch
Confidence 4556799999999999887665431 134689999843 4444431 23334566666431
Q ss_pred -----CCCccEEEeccccc---------cCC-----hHHHHHHHHHHHHhhc-------cCCCCcEEEEEEe
Q 030291 71 -----IPPSDAFFFKTVFH---------FFD-----DEDCLKLLKKCREAIA-------SNGERGKVLIIDI 116 (180)
Q Consensus 71 -----~~~~D~v~~~~~l~---------~~~-----~~~~~~~l~~~~~~L~-------p~~~~G~~~~~~~ 116 (180)
...||+|+++=-+. .++ ......++..+.+.|+ + ||++.++-+
T Consensus 295 ~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~---gGr~avVlP 363 (530)
T 3ufb_A 295 REMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDN---GGRAAVVVP 363 (530)
T ss_dssp GGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSS---CCEEEEEEE
T ss_pred hhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCC---CceEEEEec
Confidence 12599999863321 111 0112256788888886 6 888888765
No 307
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=96.24 E-value=0.027 Score=37.23 Aligned_cols=56 Identities=16% Similarity=0.169 Sum_probs=40.8
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCCCCCeeEEecCCcc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYIEGDMFQ 69 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~d~~~ 69 (180)
.-..-|||+|-|.|..-..+++.+|+.+++++|-.-......-.+.-.++.+|+.+
T Consensus 39 ~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~~~P~~e~~ilGdi~~ 94 (174)
T 3iht_A 39 GLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPDSTPPEAQLILGDIRE 94 (174)
T ss_dssp TCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGGGCCCGGGEEESCHHH
T ss_pred CCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCCCCCchHheecccHHH
Confidence 34567999999999999999999999999999942111111114455678888855
No 308
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.42 E-value=0.0053 Score=44.36 Aligned_cols=39 Identities=18% Similarity=0.131 Sum_probs=32.4
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccC
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDM 54 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a 54 (180)
+++..|||..||+|..+....+. +.+++++|+++ ..+.+
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~ 250 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQA 250 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHH
Confidence 57789999999999999988877 67899999955 55444
No 309
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=94.91 E-value=0.13 Score=42.34 Aligned_cols=119 Identities=17% Similarity=0.125 Sum_probs=71.0
Q ss_pred CCCeEEEeCCcccHHHHHHHHHC-------CC-----CeEEEeeC-c--h-hhccCCC----------------------
Q 030291 15 GLRSMVDVGGGTGAFARIISEAF-------PG-----IKCTVLDL-P--H-AVTDMPQ---------------------- 56 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~-------~~-----~~~~~~D~-~--~-~~~~a~~---------------------- 56 (180)
+.-+|+|+|-|+|.+...+.+.+ |. .+++.+|. | . .+.++.+
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 44689999999999877765542 22 56888886 2 2 2222100
Q ss_pred ---------CCCeeEEecCCcc---cC-----CCccEEEeccc-cccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeee
Q 030291 57 ---------TDNLKYIEGDMFQ---FI-----PPSDAFFFKTV-FHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVI 118 (180)
Q Consensus 57 ---------~~~~~~~~~d~~~---~~-----~~~D~v~~~~~-l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~ 118 (180)
.-.+++..+|+.+ .+ ..+|.++.-.. -..-++--...++..+.+.++| ||.+.- -
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~---g~~~~t-~--- 210 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRP---GGTFST-F--- 210 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEE---EEEEEE-S---
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCC---CCEEEe-c---
Confidence 1245677788754 22 35899887432 2222222234789999999999 544332 1
Q ss_pred CCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCeEEEEee
Q 030291 119 DEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTHYKIAP 168 (180)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 168 (180)
......++.+.++||.+.....
T Consensus 211 ----------------------------~~~~~vr~~l~~aGf~~~~~~~ 232 (689)
T 3pvc_A 211 ----------------------------TAAGFVRRGLQQAGFNVTKVKG 232 (689)
T ss_dssp ----------------------------CCCHHHHHHHHHTTCEEEEEEC
T ss_pred ----------------------------cCcHHHHHHHHhCCeEEEeccC
Confidence 0114567778888888776553
No 310
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=94.75 E-value=0.28 Score=40.22 Aligned_cols=89 Identities=19% Similarity=0.179 Sum_probs=52.7
Q ss_pred CCeEEEeCCcccHHHHHHHHHC-------C-----CCeEEEeeC---ch-hhccCCC-----------------------
Q 030291 16 LRSMVDVGGGTGAFARIISEAF-------P-----GIKCTVLDL---PH-AVTDMPQ----------------------- 56 (180)
Q Consensus 16 ~~~iLdiG~G~G~~~~~l~~~~-------~-----~~~~~~~D~---~~-~~~~a~~----------------------- 56 (180)
.-+|+|+|-|+|.+.....+.+ | ..+++++|. +. .+.++-+
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 3589999999999877665442 2 245788886 32 3321100
Q ss_pred --------CCCeeEEecCCcc---cC-----CCccEEEecccccc-CChHHHHHHHHHHHHhhcc
Q 030291 57 --------TDNLKYIEGDMFQ---FI-----PPSDAFFFKTVFHF-FDDEDCLKLLKKCREAIAS 104 (180)
Q Consensus 57 --------~~~~~~~~~d~~~---~~-----~~~D~v~~~~~l~~-~~~~~~~~~l~~~~~~L~p 104 (180)
...+++..+|+.+ .. ..+|+++.-..--. -++--...++..+.+.++|
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~ 211 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARP 211 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEE
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCC
Confidence 1234455667644 11 35899887442111 1221234789999999999
No 311
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.72 E-value=0.054 Score=40.65 Aligned_cols=92 Identities=15% Similarity=0.094 Sum_probs=61.6
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcccCCCccEEEeccccccCChHH
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDDED 90 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~~~ 90 (180)
++++++||-+|+|. |..+..+++.. +++++++|.++ ..+.+++..--..+ .+.......+|+|+-...- +
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~~~~~~~~~D~vid~~g~-----~- 245 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSMGVKHFY-TDPKQCKEELDFIISTIPT-----H- 245 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHTTCSEEE-SSGGGCCSCEEEEEECCCS-----C-
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhcCCCeec-CCHHHHhcCCCEEEECCCc-----H-
Confidence 67889999999876 78888888876 77999999754 56666543222222 3321111269998864332 1
Q ss_pred HHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 91 CLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 91 ~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
..+....+.|++ +|.+++....
T Consensus 246 --~~~~~~~~~l~~---~G~iv~~G~~ 267 (348)
T 3two_A 246 --YDLKDYLKLLTY---NGDLALVGLP 267 (348)
T ss_dssp --CCHHHHHTTEEE---EEEEEECCCC
T ss_pred --HHHHHHHHHHhc---CCEEEEECCC
Confidence 247778899999 8999887543
No 312
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.57 E-value=0.11 Score=39.77 Aligned_cols=97 Identities=14% Similarity=0.023 Sum_probs=63.0
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCC-eEEEeeCch-hhccCCCCCCeeEEec---CC-ccc-----CC-CccEEEe
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGI-KCTVLDLPH-AVTDMPQTDNLKYIEG---DM-FQF-----IP-PSDAFFF 79 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~-~~~~~D~~~-~~~~a~~~~~~~~~~~---d~-~~~-----~~-~~D~v~~ 79 (180)
++++++||-+|+|. |.++..+++.. ++ +++++|.++ .++.+++..- +.+.. |. .+. .+ .+|+|+-
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa-~~i~~~~~~~~~~~~~~~~~g~g~Dvvid 260 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLL-GAACVIVGDQNPERLKLLSDAGF-ETIDLRNSAPLRDQIDQILGKPEVDCGVD 260 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHTTTC-EEEETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCC-cEEcCCCcchHHHHHHHHhCCCCCCEEEE
Confidence 67789999999877 88888888876 66 899999854 6666665322 33321 21 110 12 5999886
Q ss_pred cccccc---------CChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 80 KTVFHF---------FDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 80 ~~~l~~---------~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
...-.. .+. . ..+....++|++ +|.+++....
T Consensus 261 ~~g~~~~~~~~~~~~~~~-~--~~~~~~~~~l~~---gG~iv~~G~~ 301 (398)
T 2dph_A 261 AVGFEAHGLGDEANTETP-N--GALNSLFDVVRA---GGAIGIPGIY 301 (398)
T ss_dssp CSCTTCBCSGGGTTSBCT-T--HHHHHHHHHEEE---EEEEECCSCC
T ss_pred CCCCcccccccccccccc-H--HHHHHHHHHHhc---CCEEEEeccc
Confidence 443221 111 1 358889999999 8988876543
No 313
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=94.48 E-value=0.18 Score=36.29 Aligned_cols=95 Identities=16% Similarity=0.174 Sum_probs=62.0
Q ss_pred cCCCeEEEeCCcccHHHHHHHHH-------CCCCeEEEeeC----chh--h----------------------cc-----
Q 030291 14 QGLRSMVDVGGGTGAFARIISEA-------FPGIKCTVLDL----PHA--V----------------------TD----- 53 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~-------~~~~~~~~~D~----~~~--~----------------------~~----- 53 (180)
+-+..|+|+|+-.|..+..++.. .+.-+++++|. ++. . ..
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 55789999999999987775542 35678999993 210 0 00
Q ss_pred --CCC----CCCeeEEecCCccc-------CC--CccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 54 --MPQ----TDNLKYIEGDMFQF-------IP--PSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 54 --a~~----~~~~~~~~~d~~~~-------~~--~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
.+. ..+++++.+++.+. .+ .+|+++.-.-.+ .... ..++.+...|+| ||.+++-+
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~Y--~~t~--~~le~~~p~l~~---GGvIv~DD 217 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDLY--EPTK--AVLEAIRPYLTK---GSIVAFDE 217 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCCH--HHHH--HHHHHHGGGEEE---EEEEEESS
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCccc--chHH--HHHHHHHHHhCC---CcEEEEcC
Confidence 011 37899999998552 12 489988865421 2222 679999999999 55555533
No 314
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.34 E-value=0.17 Score=37.66 Aligned_cols=92 Identities=14% Similarity=0.163 Sum_probs=61.4
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEec---CCcc----cCCCccEEEecccc
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEG---DMFQ----FIPPSDAFFFKTVF 83 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~---d~~~----~~~~~D~v~~~~~l 83 (180)
.+++++||-+|+|. |..+..+++.. +++++++|.++ ..+.+++..--..+.. |..+ ..+.+|+++-...
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g- 241 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAV- 241 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSC-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCC-
Confidence 67788999999876 88888888887 77999999854 6666654222122221 1111 0125888876432
Q ss_pred ccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 84 HFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
.. ..+..+.+.|++ +|.+++...
T Consensus 242 ----~~---~~~~~~~~~l~~---~G~iv~~G~ 264 (340)
T 3s2e_A 242 ----SP---KAFSQAIGMVRR---GGTIALNGL 264 (340)
T ss_dssp ----CH---HHHHHHHHHEEE---EEEEEECSC
T ss_pred ----CH---HHHHHHHHHhcc---CCEEEEeCC
Confidence 11 568889999999 898888653
No 315
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=94.29 E-value=0.44 Score=35.79 Aligned_cols=67 Identities=9% Similarity=0.093 Sum_probs=46.6
Q ss_pred CCeEEEeCCcccHHHHHHHHHCCC-CeEEEeeCch-hhccCCC-CCCeeEEecCCcccC----C--CccEEEeccc
Q 030291 16 LRSMVDVGGGTGAFARIISEAFPG-IKCTVLDLPH-AVTDMPQ-TDNLKYIEGDMFQFI----P--PSDAFFFKTV 82 (180)
Q Consensus 16 ~~~iLdiG~G~G~~~~~l~~~~~~-~~~~~~D~~~-~~~~a~~-~~~~~~~~~d~~~~~----~--~~D~v~~~~~ 82 (180)
..+++|+-||.|.++..+.+..-. ..+.++|..+ +.+..+. .++..+.++|+.+.. + .+|+++...-
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpP 77 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPP 77 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCC
Confidence 357999999999999999888421 2578999854 5444443 344567788885522 2 5899997543
No 316
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.09 E-value=0.13 Score=38.87 Aligned_cols=93 Identities=18% Similarity=0.181 Sum_probs=60.5
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCC-eEEEeeCch-hhccCCCCCCeeEEec---CCcc---c-C-CCccEEEecc
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGI-KCTVLDLPH-AVTDMPQTDNLKYIEG---DMFQ---F-I-PPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~-~~~~~D~~~-~~~~a~~~~~~~~~~~---d~~~---~-~-~~~D~v~~~~ 81 (180)
++++++||-+|+|. |..+..+++.. ++ +++++|.++ .++.+++..--..+.. |+.+ . . +.+|+|+-..
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~ 266 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVC-GASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALEST 266 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECC
Confidence 67789999999886 78888888776 55 689999754 5666554211112221 1111 0 1 2589988643
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
. .. ..+....+.|++ +|.+++....
T Consensus 267 g-----~~---~~~~~~~~~l~~---~G~iv~~G~~ 291 (371)
T 1f8f_A 267 G-----SP---EILKQGVDALGI---LGKIAVVGAP 291 (371)
T ss_dssp C-----CH---HHHHHHHHTEEE---EEEEEECCCC
T ss_pred C-----CH---HHHHHHHHHHhc---CCEEEEeCCC
Confidence 3 11 458889999999 8998887543
No 317
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.08 E-value=0.25 Score=37.08 Aligned_cols=92 Identities=14% Similarity=0.149 Sum_probs=60.5
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCC-eEEEeeCch-hhccCCCCCCeeEEecC------Cccc-----CCCccEEE
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGI-KCTVLDLPH-AVTDMPQTDNLKYIEGD------MFQF-----IPPSDAFF 78 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~-~~~~~D~~~-~~~~a~~~~~~~~~~~d------~~~~-----~~~~D~v~ 78 (180)
++++++||-+|+|. |..+..+++.. ++ +++++|.++ .++.+++..--..+..+ ..+. ...+|+|+
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vi 247 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTI 247 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEE
Confidence 56788999999876 78888888876 66 899999854 55555542211222221 1110 13589988
Q ss_pred eccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 79 FKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 79 ~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
-... .. ..+....++|++ +|.+++...
T Consensus 248 d~~g-----~~---~~~~~~~~~l~~---~G~iv~~G~ 274 (356)
T 1pl8_A 248 ECTG-----AE---ASIQAGIYATRS---GGTLVLVGL 274 (356)
T ss_dssp ECSC-----CH---HHHHHHHHHSCT---TCEEEECSC
T ss_pred ECCC-----Ch---HHHHHHHHHhcC---CCEEEEEec
Confidence 6433 22 457888899999 999988654
No 318
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.08 E-value=0.52 Score=35.65 Aligned_cols=93 Identities=12% Similarity=0.097 Sum_probs=61.3
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCC-eEEEeeCch-hhccCCCCCCeeEEec-----CCcc-----cCCCccEEEe
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGI-KCTVLDLPH-AVTDMPQTDNLKYIEG-----DMFQ-----FIPPSDAFFF 79 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~-~~~~~D~~~-~~~~a~~~~~~~~~~~-----d~~~-----~~~~~D~v~~ 79 (180)
++++.+||=+|+|. |.++..+++.. ++ +++++|.++ .++.+++..--.++.. ++.+ ..+.+|+|+-
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid 269 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTA-GASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFE 269 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHH-TCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEE
Confidence 67788999999875 77888887776 55 799999744 6666665322222221 1111 0125999886
Q ss_pred ccccccCChHHHHHHHHHHHHhhccCCCC-cEEEEEEee
Q 030291 80 KTVFHFFDDEDCLKLLKKCREAIASNGER-GKVLIIDIV 117 (180)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~~~~L~p~~~~-G~~~~~~~~ 117 (180)
... .+ ..+..+.+.|++ + |.+++....
T Consensus 270 ~~g-----~~---~~~~~~~~~l~~---g~G~iv~~G~~ 297 (378)
T 3uko_A 270 CIG-----NV---SVMRAALECCHK---GWGTSVIVGVA 297 (378)
T ss_dssp CSC-----CH---HHHHHHHHTBCT---TTCEEEECSCC
T ss_pred CCC-----CH---HHHHHHHHHhhc---cCCEEEEEccc
Confidence 433 22 558889999999 8 888887643
No 319
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.19 E-value=0.42 Score=32.44 Aligned_cols=91 Identities=9% Similarity=0.065 Sum_probs=55.4
Q ss_pred ccCCCeEEEeCC--cccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEec-C--Ccc----cC--CCccEEEec
Q 030291 13 FQGLRSMVDVGG--GTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEG-D--MFQ----FI--PPSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~-d--~~~----~~--~~~D~v~~~ 80 (180)
++++++||-.|+ |.|..+..++... +++++++|.++ ..+.+++......... + ..+ .. ..+|+++.+
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~ 114 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNS 114 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEEC
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEEC
Confidence 667889999994 4466666655544 67899999854 4544443211111111 1 101 01 248998865
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
.. . ..++.+.+.|++ +|.++....
T Consensus 115 ~g-----~----~~~~~~~~~l~~---~G~~v~~g~ 138 (198)
T 1pqw_A 115 LA-----G----EAIQRGVQILAP---GGRFIELGK 138 (198)
T ss_dssp CC-----T----HHHHHHHHTEEE---EEEEEECSC
T ss_pred Cc-----h----HHHHHHHHHhcc---CCEEEEEcC
Confidence 42 1 347888999999 898887654
No 320
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.16 E-value=0.13 Score=38.89 Aligned_cols=94 Identities=13% Similarity=0.176 Sum_probs=60.7
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCC-eEEEeeCch-hhccCCCCCCeeEEe---cCCcc---c---C--CCccEEE
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGI-KCTVLDLPH-AVTDMPQTDNLKYIE---GDMFQ---F---I--PPSDAFF 78 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~-~~~~~D~~~-~~~~a~~~~~~~~~~---~d~~~---~---~--~~~D~v~ 78 (180)
++++.+||=+|+|. |.++..+++.. ++ +++++|.++ ..+.+++..--..+. .|..+ . . +.+|+|+
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvi 258 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLA-GATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVI 258 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEE
Confidence 57788999999876 77888888876 66 899999854 555555421111111 12111 1 1 2599988
Q ss_pred eccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeee
Q 030291 79 FKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVI 118 (180)
Q Consensus 79 ~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~ 118 (180)
-... .. ..+..+.+.|++ +|.+++.....
T Consensus 259 d~~G-----~~---~~~~~~~~~l~~---~G~vv~~G~~~ 287 (370)
T 4ej6_A 259 ECAG-----VA---ETVKQSTRLAKA---GGTVVILGVLP 287 (370)
T ss_dssp ECSC-----CH---HHHHHHHHHEEE---EEEEEECSCCC
T ss_pred ECCC-----CH---HHHHHHHHHhcc---CCEEEEEeccC
Confidence 6432 12 458889999999 89988876543
No 321
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.75 E-value=0.59 Score=34.62 Aligned_cols=88 Identities=13% Similarity=0.064 Sum_probs=54.8
Q ss_pred CeEEEeCCcc-c-HHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcc-cCCCccEEEeccccccCChHHHH
Q 030291 17 RSMVDVGGGT-G-AFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQ-FIPPSDAFFFKTVFHFFDDEDCL 92 (180)
Q Consensus 17 ~~iLdiG~G~-G-~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~-~~~~~D~v~~~~~l~~~~~~~~~ 92 (180)
.+|.=||+|. | .++..+.+.....+++++|.+. .++.+.+..-+.-...|..+ .....|+|+.. ++.....
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVila-----vp~~~~~ 108 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS-----SPVRTFR 108 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEEC-----SCGGGHH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEe-----CCHHHHH
Confidence 6788899876 3 4555566653323899999854 55555433322223344433 35578998874 3444455
Q ss_pred HHHHHHHHhhccCCCCcEEEE
Q 030291 93 KLLKKCREAIASNGERGKVLI 113 (180)
Q Consensus 93 ~~l~~~~~~L~p~~~~G~~~~ 113 (180)
++++++...+++ |.+++
T Consensus 109 ~vl~~l~~~l~~----~~iv~ 125 (314)
T 3ggo_A 109 EIAKKLSYILSE----DATVT 125 (314)
T ss_dssp HHHHHHHHHSCT----TCEEE
T ss_pred HHHHHHhhccCC----CcEEE
Confidence 788999999998 55544
No 322
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=92.73 E-value=0.18 Score=38.81 Aligned_cols=55 Identities=11% Similarity=0.087 Sum_probs=39.6
Q ss_pred ccCCCeEEEeCCcccHHHHHHH-HHCCC-CeEEEeeC-chhhccCCC---------C-CCeeEEecCC
Q 030291 13 FQGLRSMVDVGGGTGAFARIIS-EAFPG-IKCTVLDL-PHAVTDMPQ---------T-DNLKYIEGDM 67 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~-~~~~~-~~~~~~D~-~~~~~~a~~---------~-~~~~~~~~d~ 67 (180)
++++..++|||++.|..+..++ ...+. .+++++|+ +...+..++ . .++++++.-+
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al 291 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGA 291 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEE
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEE
Confidence 4788999999999999999888 55544 79999998 444444432 2 5666665444
No 323
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=92.66 E-value=0.19 Score=38.49 Aligned_cols=39 Identities=10% Similarity=0.304 Sum_probs=29.3
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHC-------CCCeEEEeeCchhhc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAF-------PGIKCTVLDLPHAVT 52 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~-------~~~~~~~~D~~~~~~ 52 (180)
+.+-+|+|+|+|.|.++..++... ...+++.+|.|..+.
T Consensus 79 p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr 124 (387)
T 1zkd_A 79 PQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLR 124 (387)
T ss_dssp CSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHH
T ss_pred CCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHH
Confidence 345579999999999988877542 345899999976333
No 324
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=92.54 E-value=1.9 Score=31.92 Aligned_cols=95 Identities=9% Similarity=0.102 Sum_probs=60.5
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcc---------cCCCccEEEecc
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQ---------FIPPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~---------~~~~~D~v~~~~ 81 (180)
..++++||=.|+|. |.++..+++......++++|.++ .++.+++..-...+..+-.+ ....+|+|+-..
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~~ 237 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETA 237 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEEEECS
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcccccccc
Confidence 56788999999876 66777777776444678899854 66666653322222221111 122478877543
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEeee
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIVI 118 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~ 118 (180)
. .. ..++...+++++ +|.+++.....
T Consensus 238 G-----~~---~~~~~~~~~l~~---~G~~v~~g~~~ 263 (346)
T 4a2c_A 238 G-----VP---QTVELAVEIAGP---HAQLALVGTLH 263 (346)
T ss_dssp C-----SH---HHHHHHHHHCCT---TCEEEECCCCS
T ss_pred c-----cc---chhhhhhheecC---CeEEEEEeccC
Confidence 2 22 558888999999 89998876543
No 325
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=92.48 E-value=1.1 Score=33.56 Aligned_cols=92 Identities=10% Similarity=0.069 Sum_probs=59.5
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEe----cCCccc---------CCCccEE
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIE----GDMFQF---------IPPSDAF 77 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~----~d~~~~---------~~~~D~v 77 (180)
++++++||-+|+|. |..+..+++.. +++++++|.++ .++.+++..--..+. .+..+. ...+|+|
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~v 244 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVT 244 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEE
Confidence 56788999999875 77787888776 77799999754 555554421112222 122110 1359998
Q ss_pred EeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 78 FFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 78 ~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
+-... .. ..+....+.|++ +|.++....
T Consensus 245 id~~g-----~~---~~~~~~~~~l~~---~G~iv~~G~ 272 (352)
T 1e3j_A 245 IDCSG-----NE---KCITIGINITRT---GGTLMLVGM 272 (352)
T ss_dssp EECSC-----CH---HHHHHHHHHSCT---TCEEEECSC
T ss_pred EECCC-----CH---HHHHHHHHHHhc---CCEEEEEec
Confidence 86433 12 357888899999 899888654
No 326
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.43 E-value=1.1 Score=33.24 Aligned_cols=91 Identities=11% Similarity=0.073 Sum_probs=58.6
Q ss_pred ccCCCeEEEeCC--cccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecC---Ccc----c--CCCccEEEec
Q 030291 13 FQGLRSMVDVGG--GTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGD---MFQ----F--IPPSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d---~~~----~--~~~~D~v~~~ 80 (180)
++++++||-+|+ |.|..+..+++.. ++++++++.++ .++.+++...-..+..+ ..+ . ...+|+++-+
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~ 224 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDS 224 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEEC
Confidence 677899999994 4477777777776 77999999844 55555542222222211 111 0 1259998864
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
..- ..+..+.+.|++ +|.+++...
T Consensus 225 ~g~---------~~~~~~~~~l~~---~G~iv~~G~ 248 (334)
T 3qwb_A 225 VGK---------DTFEISLAALKR---KGVFVSFGN 248 (334)
T ss_dssp CGG---------GGHHHHHHHEEE---EEEEEECCC
T ss_pred CCh---------HHHHHHHHHhcc---CCEEEEEcC
Confidence 431 237778889999 898888654
No 327
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=91.94 E-value=0.82 Score=34.82 Aligned_cols=97 Identities=15% Similarity=0.118 Sum_probs=62.6
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCC-eEEEeeCch-hhccCCCCCCeeEEec---C-Ccc------cCCCccEEEe
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGI-KCTVLDLPH-AVTDMPQTDNLKYIEG---D-MFQ------FIPPSDAFFF 79 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~-~~~~~D~~~-~~~~a~~~~~~~~~~~---d-~~~------~~~~~D~v~~ 79 (180)
++++++||-+|+|. |.++..+++.. ++ +++++|.++ .++.+++..- +.+.. + +.+ ....+|+|+-
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~-Ga~~Vi~~~~~~~~~~~a~~lGa-~~i~~~~~~~~~~~v~~~t~g~g~Dvvid 260 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLL-GAAVVIVGDLNPARLAHAKAQGF-EIADLSLDTPLHEQIAALLGEPEVDCAVD 260 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTC-EEEETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHcCC-cEEccCCcchHHHHHHHHhCCCCCCEEEE
Confidence 56788999999876 88888888886 56 789999854 6666654222 22221 1 111 0125999886
Q ss_pred ccccc---------cCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 80 KTVFH---------FFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 80 ~~~l~---------~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
...-. |.+++. ..+....++|++ +|.+++...
T Consensus 261 ~~G~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~---~G~iv~~G~ 301 (398)
T 1kol_A 261 AVGFEARGHGHEGAKHEAPA--TVLNSLMQVTRV---AGKIGIPGL 301 (398)
T ss_dssp CCCTTCBCSSTTGGGSBCTT--HHHHHHHHHEEE---EEEEEECSC
T ss_pred CCCCcccccccccccccchH--HHHHHHHHHHhc---CCEEEEecc
Confidence 43321 122222 458889999999 899887654
No 328
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.73 E-value=1.7 Score=27.76 Aligned_cols=88 Identities=11% Similarity=0.095 Sum_probs=51.7
Q ss_pred CCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCccc-------CCCccEEEeccccccC
Q 030291 16 LRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQF-------IPPSDAFFFKTVFHFF 86 (180)
Q Consensus 16 ~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~-------~~~~D~v~~~~~l~~~ 86 (180)
..+|+=+|+|. |......+... +..++++|..+ .++.+++ ..+.++.+|..++ ...+|++++..
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~-g~~v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~----- 79 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS-DIPLVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLAHLECAKWLILTI----- 79 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHTTGGGCSEEEECC-----
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhcCcccCCEEEEEC-----
Confidence 45788888876 44333333332 66899999854 5555543 4677788887542 23688887632
Q ss_pred ChHHHHHHHHHHHHhhccCCCCcEEEE
Q 030291 87 DDEDCLKLLKKCREAIASNGERGKVLI 113 (180)
Q Consensus 87 ~~~~~~~~l~~~~~~L~p~~~~G~~~~ 113 (180)
++......+....+.+.| +..++.
T Consensus 80 ~~~~~n~~~~~~a~~~~~---~~~iia 103 (140)
T 3fwz_A 80 PNGYEAGEIVASARAKNP---DIEIIA 103 (140)
T ss_dssp SCHHHHHHHHHHHHHHCS---SSEEEE
T ss_pred CChHHHHHHHHHHHHHCC---CCeEEE
Confidence 233222334455666777 565554
No 329
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=91.69 E-value=0.35 Score=35.32 Aligned_cols=95 Identities=13% Similarity=0.030 Sum_probs=62.1
Q ss_pred CCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCc-hhhccCCC----CCCeeEEecCCccc-----C--CCccEEEecccc
Q 030291 16 LRSMVDVGGGTGAFARIISEAFPGIKCTVLDLP-HAVTDMPQ----TDNLKYIEGDMFQF-----I--PPSDAFFFKTVF 83 (180)
Q Consensus 16 ~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~-~~~~~a~~----~~~~~~~~~d~~~~-----~--~~~D~v~~~~~l 83 (180)
+..+||+=+|+|.++..+++. ..+++.+|.. +.....++ ..++++...|.... . ..+|+|++-=-.
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~--~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPY 169 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS--QDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSY 169 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT--TSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCC
T ss_pred CCCceeEeCCcHHHHHHHcCC--CCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCC
Confidence 566899999999999998884 5789999993 34433333 46799999997541 1 259999983332
Q ss_pred ccCChHHHHHHHHHHHHh--hccCCCCcEEEEEEee
Q 030291 84 HFFDDEDCLKLLKKCREA--IASNGERGKVLIIDIV 117 (180)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~--L~p~~~~G~~~~~~~~ 117 (180)
+.-. ...++++.+.+. +.| +|.+++=-+.
T Consensus 170 e~k~--~~~~vl~~L~~~~~r~~---~Gi~v~WYPi 200 (283)
T 2oo3_A 170 ERKE--EYKEIPYAIKNAYSKFS---TGLYCVWYPV 200 (283)
T ss_dssp CSTT--HHHHHHHHHHHHHHHCT---TSEEEEEEEE
T ss_pred CCCc--HHHHHHHHHHHhCccCC---CeEEEEEEec
Confidence 2111 233556666653 344 6777764443
No 330
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.61 E-value=0.28 Score=37.11 Aligned_cols=92 Identities=11% Similarity=0.111 Sum_probs=58.6
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEec---CCccc-CCCccEEEeccccccC
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEG---DMFQF-IPPSDAFFFKTVFHFF 86 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~---d~~~~-~~~~D~v~~~~~l~~~ 86 (180)
++++++||-+|+|. |..+..+++.. +++++++|.++ .++.+++..--.++.. +.... ...+|+|+-...-
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~--- 267 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAA--- 267 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSS---
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCC---
Confidence 66789999999876 77888888776 77899999744 5555544211112211 11111 1368998864332
Q ss_pred ChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 87 DDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 87 ~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
+ ..++...+.|++ +|.++....
T Consensus 268 --~---~~~~~~~~~l~~---~G~iv~~G~ 289 (369)
T 1uuf_A 268 --P---HNLDDFTTLLKR---DGTMTLVGA 289 (369)
T ss_dssp --C---CCHHHHHTTEEE---EEEEEECCC
T ss_pred --H---HHHHHHHHHhcc---CCEEEEecc
Confidence 1 236677889999 898887654
No 331
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=91.50 E-value=0.82 Score=34.53 Aligned_cols=92 Identities=12% Similarity=0.058 Sum_probs=59.5
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCC-eEEEeeCch-hhccCCCCCCeeEEec-----CCccc-----CCCccEEEe
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGI-KCTVLDLPH-AVTDMPQTDNLKYIEG-----DMFQF-----IPPSDAFFF 79 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~-~~~~~D~~~-~~~~a~~~~~~~~~~~-----d~~~~-----~~~~D~v~~ 79 (180)
++++++||-+|+|. |.++..+++.. ++ +++++|.++ .++.+++..--..+.. ++.+. .+.+|+|+-
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid 271 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLD 271 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEE
Confidence 66788999999875 77888888876 66 799999744 5555554221112211 11110 125899886
Q ss_pred ccccccCChHHHHHHHHHHHHhhccCCCC-cEEEEEEe
Q 030291 80 KTVFHFFDDEDCLKLLKKCREAIASNGER-GKVLIIDI 116 (180)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~~~~L~p~~~~-G~~~~~~~ 116 (180)
... .. ..+....++|++ + |.+++...
T Consensus 272 ~~G-----~~---~~~~~~~~~l~~---~~G~iv~~G~ 298 (376)
T 1e3i_A 272 CAG-----TA---QTLKAAVDCTVL---GWGSCTVVGA 298 (376)
T ss_dssp SSC-----CH---HHHHHHHHTBCT---TTCEEEECCC
T ss_pred CCC-----CH---HHHHHHHHHhhc---CCCEEEEECC
Confidence 432 12 458888999999 8 99887654
No 332
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=91.40 E-value=0.49 Score=35.63 Aligned_cols=92 Identities=16% Similarity=0.122 Sum_probs=60.6
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecC---Ccc------cCCCccEEEecc
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGD---MFQ------FIPPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d---~~~------~~~~~D~v~~~~ 81 (180)
++++++||=+|+|. |..+..+++.. +++++++|.++ .++.+++..--..+..+ +.+ ....+|+|+-..
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~ 265 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIA 265 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEET
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECC
Confidence 67889999999776 77888888776 77999999854 56655542211222221 111 112599988643
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
. . ..+....+.|++ +|.+++....
T Consensus 266 g-----~----~~~~~~~~~l~~---~G~iv~~G~~ 289 (363)
T 3uog_A 266 G-----G----AGLGQSLKAVAP---DGRISVIGVL 289 (363)
T ss_dssp T-----S----SCHHHHHHHEEE---EEEEEEECCC
T ss_pred C-----h----HHHHHHHHHhhc---CCEEEEEecC
Confidence 3 1 236778889999 8999887654
No 333
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=91.40 E-value=0.39 Score=35.97 Aligned_cols=93 Identities=11% Similarity=0.112 Sum_probs=60.5
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCC-eEEEeeCch-hhccCCCCCCeeEEe---cCCcc----cC-C-CccEEEec
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGI-KCTVLDLPH-AVTDMPQTDNLKYIE---GDMFQ----FI-P-PSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~-~~~~~D~~~-~~~~a~~~~~~~~~~---~d~~~----~~-~-~~D~v~~~ 80 (180)
++++++||=+|+|. |.++..+++.. ++ +++++|.++ .++.+++..--.++. .|+.+ .. + .+|+|+-.
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~ 242 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHL-GAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIA 242 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTT-TCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEEC
Confidence 57788999999876 77788888776 66 799999854 566665422111221 12211 11 2 59998863
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
.. .+ ..+..+.+.|++ +|.++.....
T Consensus 243 ~g-----~~---~~~~~~~~~l~~---~G~~v~~G~~ 268 (352)
T 3fpc_A 243 GG-----DV---HTFAQAVKMIKP---GSDIGNVNYL 268 (352)
T ss_dssp SS-----CT---THHHHHHHHEEE---EEEEEECCCC
T ss_pred CC-----Ch---HHHHHHHHHHhc---CCEEEEeccc
Confidence 32 21 458888999999 8998887643
No 334
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=91.33 E-value=0.68 Score=34.49 Aligned_cols=94 Identities=14% Similarity=0.145 Sum_probs=62.5
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEec--CCccc------CCCccEEEeccc
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEG--DMFQF------IPPSDAFFFKTV 82 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~--d~~~~------~~~~D~v~~~~~ 82 (180)
.+++++||=+|+|. |..+..+++...+.+++++|.++ .++.+++..--.++.. +..+. ...+|+|+-...
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G 248 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVG 248 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCC
Confidence 57788999999876 78888888776577999999855 6666654222222221 11111 115898886433
Q ss_pred cccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 83 FHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 83 l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
.+ ..+..+.+.|++ +|.+++....
T Consensus 249 -----~~---~~~~~~~~~l~~---~G~iv~~G~~ 272 (345)
T 3jv7_A 249 -----AQ---STIDTAQQVVAV---DGHISVVGIH 272 (345)
T ss_dssp -----CH---HHHHHHHHHEEE---EEEEEECSCC
T ss_pred -----CH---HHHHHHHHHHhc---CCEEEEECCC
Confidence 22 468899999999 8998887543
No 335
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=91.21 E-value=0.75 Score=34.68 Aligned_cols=92 Identities=9% Similarity=0.023 Sum_probs=59.2
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCC-eEEEeeCch-hhccCCCCCCeeEEec-----CCcc-----cCCCccEEEe
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGI-KCTVLDLPH-AVTDMPQTDNLKYIEG-----DMFQ-----FIPPSDAFFF 79 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~-~~~~~D~~~-~~~~a~~~~~~~~~~~-----d~~~-----~~~~~D~v~~ 79 (180)
++++++||-+|+|. |..+..+++.. ++ +++++|.++ .++.+++..--..+.. ++.+ ..+.+|+|+-
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid 267 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAA-GASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVE 267 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEE
Confidence 66788999999876 77777787776 55 799999744 5555554221112211 1111 0125899886
Q ss_pred ccccccCChHHHHHHHHHHHHhhccCCCC-cEEEEEEe
Q 030291 80 KTVFHFFDDEDCLKLLKKCREAIASNGER-GKVLIIDI 116 (180)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~~~~L~p~~~~-G~~~~~~~ 116 (180)
... .. ..+....+.|++ + |.+++...
T Consensus 268 ~~g-----~~---~~~~~~~~~l~~---~~G~iv~~G~ 294 (373)
T 1p0f_A 268 CAG-----RI---ETMMNALQSTYC---GSGVTVVLGL 294 (373)
T ss_dssp CSC-----CH---HHHHHHHHTBCT---TTCEEEECCC
T ss_pred CCC-----CH---HHHHHHHHHHhc---CCCEEEEEcc
Confidence 432 12 458888999999 8 99887654
No 336
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=91.06 E-value=0.84 Score=33.95 Aligned_cols=92 Identities=14% Similarity=0.177 Sum_probs=58.4
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEec---CCccc----CCCccEEEecccc
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEG---DMFQF----IPPSDAFFFKTVF 83 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~---d~~~~----~~~~D~v~~~~~l 83 (180)
++++++||-+|+|. |..+..+++.. +++++++|.++ .++.+++..-...+.. |..+. ...+|+++.....
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~ 240 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVS 240 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCC
Confidence 56788999999864 77777777776 67999999744 5555543211111111 11010 1358988864431
Q ss_pred ccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 84 HFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
. ..++...+.|++ +|.++....
T Consensus 241 -----~---~~~~~~~~~l~~---~G~~v~~g~ 262 (339)
T 1rjw_A 241 -----K---PAFQSAYNSIRR---GGACVLVGL 262 (339)
T ss_dssp -----H---HHHHHHHHHEEE---EEEEEECCC
T ss_pred -----H---HHHHHHHHHhhc---CCEEEEecc
Confidence 1 457888899999 888887653
No 337
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=91.04 E-value=1.3 Score=33.32 Aligned_cols=92 Identities=12% Similarity=0.070 Sum_probs=59.3
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCC-eEEEeeCch-hhccCCCCCCeeEEec-----CCccc-----CCCccEEEe
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGI-KCTVLDLPH-AVTDMPQTDNLKYIEG-----DMFQF-----IPPSDAFFF 79 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~-~~~~~D~~~-~~~~a~~~~~~~~~~~-----d~~~~-----~~~~D~v~~ 79 (180)
++++++||-+|+|. |..+..+++.. ++ +++++|.++ .++.+++..--..+.. ++.+. .+.+|+|+-
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid 268 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLE 268 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEE
Confidence 66788999999865 77788888876 66 799999744 5555554221112211 11110 125899886
Q ss_pred ccccccCChHHHHHHHHHHHHhhccCCCC-cEEEEEEe
Q 030291 80 KTVFHFFDDEDCLKLLKKCREAIASNGER-GKVLIIDI 116 (180)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~~~~L~p~~~~-G~~~~~~~ 116 (180)
...- . ..+..+.++|++ + |.+++...
T Consensus 269 ~~g~-----~---~~~~~~~~~l~~---~~G~iv~~G~ 295 (374)
T 1cdo_A 269 CVGN-----V---GVMRNALESCLK---GWGVSVLVGW 295 (374)
T ss_dssp CSCC-----H---HHHHHHHHTBCT---TTCEEEECSC
T ss_pred CCCC-----H---HHHHHHHHHhhc---CCcEEEEEcC
Confidence 4321 2 458888999999 8 99888654
No 338
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=90.89 E-value=2.4 Score=32.25 Aligned_cols=64 Identities=13% Similarity=0.052 Sum_probs=45.0
Q ss_pred CeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-CCCeeEEecCCccc-----------CCCccEEEecc
Q 030291 17 RSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-TDNLKYIEGDMFQF-----------IPPSDAFFFKT 81 (180)
Q Consensus 17 ~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-~~~~~~~~~d~~~~-----------~~~~D~v~~~~ 81 (180)
-+++|+-||.|.++..+.+.. -..+.++|..+ +.+..+. .++..++++|+.+. .+.+|+++..-
T Consensus 3 ~~vidLFsG~GGlslG~~~aG-~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggp 79 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG-FDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGP 79 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT-CEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECC
T ss_pred CeEEEEccCcCHHHHHHHHCC-CcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecC
Confidence 479999999999999998884 22356999854 4433332 45667788888542 13699998743
No 339
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=90.81 E-value=1.4 Score=32.66 Aligned_cols=93 Identities=13% Similarity=0.131 Sum_probs=58.2
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEE---ecCCcc----cCC--CccEEEecc
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYI---EGDMFQ----FIP--PSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~---~~d~~~----~~~--~~D~v~~~~ 81 (180)
.+++++||=+|+|. |..+..+++...+.+++++|.++ .++.+++..-...+ ..|..+ ... .+|.++...
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~ 240 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCA 240 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECC
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEec
Confidence 56788999999887 45666666666688999999855 55555542222222 222211 111 366666533
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
.- . ..+....+.+++ +|.+++...
T Consensus 241 ~~-----~---~~~~~~~~~l~~---~G~~v~~g~ 264 (348)
T 4eez_A 241 VA-----R---IAFEQAVASLKP---MGKMVAVAV 264 (348)
T ss_dssp SC-----H---HHHHHHHHTEEE---EEEEEECCC
T ss_pred cC-----c---chhheeheeecC---CceEEEEec
Confidence 21 1 558888999999 888887653
No 340
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=90.75 E-value=0.57 Score=34.88 Aligned_cols=92 Identities=12% Similarity=0.147 Sum_probs=56.6
Q ss_pred ccCCCeEEEeCCc--ccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEec---CCcc----c--CCCccEEEec
Q 030291 13 FQGLRSMVDVGGG--TGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEG---DMFQ----F--IPPSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~G--~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~---d~~~----~--~~~~D~v~~~ 80 (180)
++++++||-+|+| .|..+..+++.. +++++++|.++ .++.+++...-..+.. +..+ . ...+|+++-+
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~ 220 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDS 220 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEEC
Confidence 6788999999987 477777777765 77999999744 5555554211111211 1111 0 1259998864
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
.. .+. .....+.|++ +|.+++....
T Consensus 221 ~g-----~~~----~~~~~~~l~~---~G~iv~~G~~ 245 (340)
T 3gms_A 221 IG-----GPD----GNELAFSLRP---NGHFLTIGLL 245 (340)
T ss_dssp SC-----HHH----HHHHHHTEEE---EEEEEECCCT
T ss_pred CC-----Chh----HHHHHHHhcC---CCEEEEEeec
Confidence 33 222 3344589999 8998887643
No 341
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=90.73 E-value=1.7 Score=32.72 Aligned_cols=92 Identities=11% Similarity=0.049 Sum_probs=59.0
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCC-eEEEeeCch-hhccCCCCCCeeEEec-----CCcc---c--CCCccEEEe
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGI-KCTVLDLPH-AVTDMPQTDNLKYIEG-----DMFQ---F--IPPSDAFFF 79 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~-~~~~~D~~~-~~~~a~~~~~~~~~~~-----d~~~---~--~~~~D~v~~ 79 (180)
++++++||-+|+|. |..+..+++.. ++ +++++|.++ .++.+++..--..+.. ++.+ . ...+|+|+-
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid 267 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAA-GAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFE 267 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEE
Confidence 66788999999876 77788888876 66 799999744 5555544221112211 1111 0 125899886
Q ss_pred ccccccCChHHHHHHHHHHHHhhccCCCC-cEEEEEEe
Q 030291 80 KTVFHFFDDEDCLKLLKKCREAIASNGER-GKVLIIDI 116 (180)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~~~~L~p~~~~-G~~~~~~~ 116 (180)
... .. ..+....+.|++ + |.+++...
T Consensus 268 ~~g-----~~---~~~~~~~~~l~~---~~G~iv~~G~ 294 (374)
T 2jhf_A 268 VIG-----RL---DTMVTALSCCQE---AYGVSVIVGV 294 (374)
T ss_dssp CSC-----CH---HHHHHHHHHBCT---TTCEEEECSC
T ss_pred CCC-----CH---HHHHHHHHHhhc---CCcEEEEecc
Confidence 432 22 457888999999 8 99887654
No 342
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=90.54 E-value=1.1 Score=33.27 Aligned_cols=92 Identities=15% Similarity=0.133 Sum_probs=59.1
Q ss_pred ccCCCeEEEeCC--cccHHHHHHHHHCCCCeEEEeeCch-hhccC-CCCCCeeEEec---CCcc-----cCCCccEEEec
Q 030291 13 FQGLRSMVDVGG--GTGAFARIISEAFPGIKCTVLDLPH-AVTDM-PQTDNLKYIEG---DMFQ-----FIPPSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a-~~~~~~~~~~~---d~~~-----~~~~~D~v~~~ 80 (180)
++++++||-.|+ |.|..+..+++.. ++++++++.++ .++.+ ++..--..+.. +..+ ....+|+++.+
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 225 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDN 225 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEEC
Confidence 678899999998 4477777777776 77999999754 55555 33221111211 1111 11258988764
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
.. . ..+..+.+.|++ +|.+++....
T Consensus 226 ~g-----~----~~~~~~~~~l~~---~G~iv~~G~~ 250 (336)
T 4b7c_A 226 VG-----G----EILDTVLTRIAF---KARIVLCGAI 250 (336)
T ss_dssp SC-----H----HHHHHHHTTEEE---EEEEEECCCG
T ss_pred CC-----c----chHHHHHHHHhh---CCEEEEEeec
Confidence 43 1 348888899999 8998886543
No 343
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=90.22 E-value=0.23 Score=36.53 Aligned_cols=87 Identities=10% Similarity=0.096 Sum_probs=55.4
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcccCC-CccEEEeccccccCChH
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQFIP-PSDAFFFKTVFHFFDDE 89 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~~~-~~D~v~~~~~l~~~~~~ 89 (180)
++++++||=+|+|. |.++..+++.. ++++++++ ++ ..+.+++..--..+ .| .+..+ .+|+|+-... .+
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~lGa~~v~-~d-~~~v~~g~Dvv~d~~g-----~~ 210 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAKRGVRHLY-RE-PSQVTQKYFAIFDAVN-----SQ 210 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHHHTEEEEE-SS-GGGCCSCEEEEECC---------
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHHcCCCEEE-cC-HHHhCCCccEEEECCC-----ch
Confidence 67889999999864 77888888776 77999999 54 55656542212222 24 23333 5998885332 22
Q ss_pred HHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 90 DCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 90 ~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
.+....+.|++ +|.++...
T Consensus 211 ----~~~~~~~~l~~---~G~~v~~g 229 (315)
T 3goh_A 211 ----NAAALVPSLKA---NGHIICIQ 229 (315)
T ss_dssp -------TTGGGEEE---EEEEEEEC
T ss_pred ----hHHHHHHHhcC---CCEEEEEe
Confidence 13567789999 89888874
No 344
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=90.08 E-value=1.3 Score=32.83 Aligned_cols=91 Identities=10% Similarity=0.074 Sum_probs=58.0
Q ss_pred ccCCCeEEEeCC--cccHHHHHHHHHCCCCeEEEeeCch-hhccCC-CCCCeeEEe-c---CCccc-----CCCccEEEe
Q 030291 13 FQGLRSMVDVGG--GTGAFARIISEAFPGIKCTVLDLPH-AVTDMP-QTDNLKYIE-G---DMFQF-----IPPSDAFFF 79 (180)
Q Consensus 13 ~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~-~~~~~~~~~-~---d~~~~-----~~~~D~v~~ 79 (180)
++++++||-.|+ |.|..+..+++.. ++++++++.++ .++.++ +........ . ++.+. ...+|+++.
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~ 231 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFE 231 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEE
Confidence 567889999997 4577777777765 67899999854 555554 321111111 1 11110 125898886
Q ss_pred ccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 80 KTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
+.. . ..+....+.|++ +|.+++...
T Consensus 232 ~~g-----~----~~~~~~~~~l~~---~G~~v~~G~ 256 (345)
T 2j3h_A 232 NVG-----G----KMLDAVLVNMNM---HGRIAVCGM 256 (345)
T ss_dssp SSC-----H----HHHHHHHTTEEE---EEEEEECCC
T ss_pred CCC-----H----HHHHHHHHHHhc---CCEEEEEcc
Confidence 543 1 347888899999 898888654
No 345
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=89.96 E-value=1.7 Score=33.12 Aligned_cols=94 Identities=17% Similarity=0.153 Sum_probs=57.9
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCC-eEEEeeCch-hhccCCCCCCeeEEec---CCcc----c--CCCccEEEec
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGI-KCTVLDLPH-AVTDMPQTDNLKYIEG---DMFQ----F--IPPSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~-~~~~~D~~~-~~~~a~~~~~~~~~~~---d~~~----~--~~~~D~v~~~ 80 (180)
++++++||=+|+|. |..+..+++.. ++ +++++|.++ .++.+++..--.++.. |+.+ . ...+|+|+-.
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~ 289 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHA-GASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEA 289 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEEC
Confidence 56788999999866 77788888876 66 899999754 6666654221112211 1111 0 1259998863
Q ss_pred cccccCChHHHHHHHHHHHHhh----ccCCCCcEEEEEEee
Q 030291 81 TVFHFFDDEDCLKLLKKCREAI----ASNGERGKVLIIDIV 117 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L----~p~~~~G~~~~~~~~ 117 (180)
.. .+. ..+..+.++| ++ +|.+++....
T Consensus 290 ~g-----~~~--~~~~~~~~~l~~~~~~---~G~iv~~G~~ 320 (404)
T 3ip1_A 290 TG-----VPQ--LVWPQIEEVIWRARGI---NATVAIVARA 320 (404)
T ss_dssp SS-----CHH--HHHHHHHHHHHHCSCC---CCEEEECSCC
T ss_pred CC-----CcH--HHHHHHHHHHHhccCC---CcEEEEeCCC
Confidence 32 221 2355555566 99 9999987643
No 346
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=89.68 E-value=1.2 Score=33.59 Aligned_cols=90 Identities=17% Similarity=0.192 Sum_probs=57.8
Q ss_pred CCCeEEEeC-Ccc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEec--CCcc---c--CCCccEEEeccccc
Q 030291 15 GLRSMVDVG-GGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEG--DMFQ---F--IPPSDAFFFKTVFH 84 (180)
Q Consensus 15 ~~~~iLdiG-~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~--d~~~---~--~~~~D~v~~~~~l~ 84 (180)
++++||=+| +|. |..+..+++...+++++++|.++ ..+.+++..--.++.. +..+ . ...+|+|+-...
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g-- 248 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTH-- 248 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECSC--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECCC--
Confidence 677899888 444 88888888874478999999854 5555554221111211 1111 1 125898876332
Q ss_pred cCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 85 FFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 85 ~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
.. ..+..+.++|++ +|.+++..
T Consensus 249 ---~~---~~~~~~~~~l~~---~G~iv~~g 270 (363)
T 4dvj_A 249 ---TD---KHAAEIADLIAP---QGRFCLID 270 (363)
T ss_dssp ---HH---HHHHHHHHHSCT---TCEEEECS
T ss_pred ---ch---hhHHHHHHHhcC---CCEEEEEC
Confidence 22 468889999999 99998873
No 347
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=89.67 E-value=1 Score=34.15 Aligned_cols=93 Identities=14% Similarity=0.109 Sum_probs=59.3
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCC-CeEEEeeCch-hhccCCCCCCeeEEecC------Ccc----cC-C-CccEE
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPG-IKCTVLDLPH-AVTDMPQTDNLKYIEGD------MFQ----FI-P-PSDAF 77 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~-~~~~~~D~~~-~~~~a~~~~~~~~~~~d------~~~----~~-~-~~D~v 77 (180)
++++++||-+|+|. |..+..+++.. + .++++++.++ .++.+++..--.++..+ +.+ .. + .+|+|
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvv 271 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSL-GAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFI 271 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHT-TBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEE
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHc-CCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEE
Confidence 45678999999665 77888888876 6 5899999754 55555542222222222 111 11 2 59998
Q ss_pred EeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 78 FFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 78 ~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
+-...- . ..+....+.|++ +|.++.....
T Consensus 272 id~~g~-----~---~~~~~~~~~l~~---~G~iv~~G~~ 300 (380)
T 1vj0_A 272 LEATGD-----S---RALLEGSELLRR---GGFYSVAGVA 300 (380)
T ss_dssp EECSSC-----T---THHHHHHHHEEE---EEEEEECCCC
T ss_pred EECCCC-----H---HHHHHHHHHHhc---CCEEEEEecC
Confidence 864331 1 347788899999 8988876543
No 348
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=89.62 E-value=2.6 Score=31.29 Aligned_cols=89 Identities=17% Similarity=0.189 Sum_probs=57.9
Q ss_pred CCCeEEEeCCcc-cHHHHHHHHHCCCC-eEEEeeCch-hhccCCCCCCeeEEec---CCcc-----cCCCccEEEecccc
Q 030291 15 GLRSMVDVGGGT-GAFARIISEAFPGI-KCTVLDLPH-AVTDMPQTDNLKYIEG---DMFQ-----FIPPSDAFFFKTVF 83 (180)
Q Consensus 15 ~~~~iLdiG~G~-G~~~~~l~~~~~~~-~~~~~D~~~-~~~~a~~~~~~~~~~~---d~~~-----~~~~~D~v~~~~~l 83 (180)
++++||-+|+|. |..+..+++.. ++ +++++|.++ .++.+++. --..+.. ++.+ ....+|+|+-...
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g- 240 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSG- 240 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHHSSCEEEEEECSC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhcCCCCCEEEECCC-
Confidence 788999999854 77777777776 66 899999854 66666543 2222221 1101 1125899886433
Q ss_pred ccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 84 HFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
.. ..++...+.|++ +|.++....
T Consensus 241 ----~~---~~~~~~~~~l~~---~G~iv~~g~ 263 (343)
T 2dq4_A 241 ----NE---AAIHQGLMALIP---GGEARILGI 263 (343)
T ss_dssp ----CH---HHHHHHHHHEEE---EEEEEECCC
T ss_pred ----CH---HHHHHHHHHHhc---CCEEEEEec
Confidence 22 457888999999 888887654
No 349
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=89.57 E-value=2.9 Score=27.02 Aligned_cols=85 Identities=18% Similarity=0.163 Sum_probs=48.1
Q ss_pred cCCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcc-----c--CCCccEEEeccccc
Q 030291 14 QGLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQ-----F--IPPSDAFFFKTVFH 84 (180)
Q Consensus 14 ~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~-----~--~~~~D~v~~~~~l~ 84 (180)
....+|+=+|+|. |......+... +..++++|.+. ..+.++...+..++.+|..+ . ...+|+|+..-.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~-- 93 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN-- 93 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS--
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC--
Confidence 4567899999865 44333333333 56899999844 56666522345556666532 1 235898887432
Q ss_pred cCChHHHHHHHHHHHHhhcc
Q 030291 85 FFDDEDCLKLLKKCREAIAS 104 (180)
Q Consensus 85 ~~~~~~~~~~l~~~~~~L~p 104 (180)
+......+..+.+.+.+
T Consensus 94 ---~~~~~~~~~~~~~~~~~ 110 (155)
T 2g1u_A 94 ---DDSTNFFISMNARYMFN 110 (155)
T ss_dssp ---CHHHHHHHHHHHHHTSC
T ss_pred ---CcHHHHHHHHHHHHHCC
Confidence 33333445555555555
No 350
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=89.35 E-value=1.1 Score=33.62 Aligned_cols=93 Identities=14% Similarity=0.070 Sum_probs=60.5
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCCe-EEEeeCch-hhccCCC-C-CCeeEEec-----CCcc----c--CCCccE
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGIK-CTVLDLPH-AVTDMPQ-T-DNLKYIEG-----DMFQ----F--IPPSDA 76 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~-~~~~D~~~-~~~~a~~-~-~~~~~~~~-----d~~~----~--~~~~D~ 76 (180)
++++++||=+|+|. |.++..+++.. +++ ++++|.++ ..+.+++ . .-+.+... |+.+ . ...+|+
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dv 255 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAA-GACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAV 255 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCE
Confidence 67788999999876 78888888876 665 89999754 5555543 1 22233211 1111 1 125999
Q ss_pred EEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 77 FFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 77 v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
|+-... .+ ..+..+.+.|++ +|.+++....
T Consensus 256 vid~~g-----~~---~~~~~~~~~l~~---~G~iv~~G~~ 285 (363)
T 3m6i_A 256 ALECTG-----VE---SSIAAAIWAVKF---GGKVFVIGVG 285 (363)
T ss_dssp EEECSC-----CH---HHHHHHHHHSCT---TCEEEECCCC
T ss_pred EEECCC-----Ch---HHHHHHHHHhcC---CCEEEEEccC
Confidence 886433 22 458888999999 9999987643
No 351
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=89.18 E-value=1.4 Score=33.14 Aligned_cols=92 Identities=13% Similarity=0.091 Sum_probs=58.6
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCC-eEEEeeCch-hhccCCCCCCeeEEe-c----CCcc---c--CCCccEEEe
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGI-KCTVLDLPH-AVTDMPQTDNLKYIE-G----DMFQ---F--IPPSDAFFF 79 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~-~~~~~D~~~-~~~~a~~~~~~~~~~-~----d~~~---~--~~~~D~v~~ 79 (180)
++++++||-+|+|. |.++..+++.. ++ +++++|.++ .++.+++..--.++. . ++.+ . ...+|+|+-
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid 266 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFE 266 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEE
Confidence 66788999999866 77777777765 66 799999744 555555411111121 1 1111 0 125899886
Q ss_pred ccccccCChHHHHHHHHHHHHhhccCCCC-cEEEEEEe
Q 030291 80 KTVFHFFDDEDCLKLLKKCREAIASNGER-GKVLIIDI 116 (180)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~~~~L~p~~~~-G~~~~~~~ 116 (180)
... .. ..+..+.++|++ + |.+++...
T Consensus 267 ~~g-----~~---~~~~~~~~~l~~---~~G~iv~~G~ 293 (373)
T 2fzw_A 267 CIG-----NV---KVMRAALEACHK---GWGVSVVVGV 293 (373)
T ss_dssp CSC-----CH---HHHHHHHHTBCT---TTCEEEECSC
T ss_pred CCC-----cH---HHHHHHHHhhcc---CCcEEEEEec
Confidence 432 12 457888999999 8 99888654
No 352
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=89.06 E-value=0.81 Score=33.50 Aligned_cols=52 Identities=17% Similarity=0.262 Sum_probs=36.2
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCC----CeEEEeeCchhhccCCCCCCeeEEec
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPG----IKCTVLDLPHAVTDMPQTDNLKYIEG 65 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~----~~~~~~D~~~~~~~a~~~~~~~~~~~ 65 (180)
.++..|+=+|||.|.....|.+.+|. .+++.+|+..--.......+++.+..
T Consensus 59 ~~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~~~~l~~~~NV~li~~ 114 (307)
T 3mag_A 59 LDGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPILNGLRDVTLVTR 114 (307)
T ss_dssp STTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGGGTTCTTEEEEEC
T ss_pred CCCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcchhhhcCCCcEEEEec
Confidence 34679999999999999988887654 68999997332222223455655544
No 353
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=89.02 E-value=1.5 Score=32.38 Aligned_cols=91 Identities=13% Similarity=0.143 Sum_probs=56.7
Q ss_pred ccCCCeEEEeCC--cccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCC-CeeEEecC---Ccc-----cCCCccEEEec
Q 030291 13 FQGLRSMVDVGG--GTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTD-NLKYIEGD---MFQ-----FIPPSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~-~~~~~~~d---~~~-----~~~~~D~v~~~ 80 (180)
++++++||-.|+ |.|..+..++... +++++++|.++ .++.+++.. ...+-..+ ..+ ....+|+++.+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~ 221 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDN 221 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEES
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEEC
Confidence 567889999997 4566776666665 77899999743 555443321 11111111 100 01358998875
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
.. . ..+....+.|++ +|.+++...
T Consensus 222 ~g-----~----~~~~~~~~~l~~---~G~~v~~g~ 245 (333)
T 1v3u_A 222 VG-----G----EFLNTVLSQMKD---FGKIAICGA 245 (333)
T ss_dssp SC-----H----HHHHHHHTTEEE---EEEEEECCC
T ss_pred CC-----h----HHHHHHHHHHhc---CCEEEEEec
Confidence 44 1 237788899999 898887654
No 354
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=88.82 E-value=0.97 Score=33.70 Aligned_cols=90 Identities=13% Similarity=0.162 Sum_probs=57.4
Q ss_pred ccCCCeEEEeCC--cccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCc---c---c-----CCCccEEE
Q 030291 13 FQGLRSMVDVGG--GTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMF---Q---F-----IPPSDAFF 78 (180)
Q Consensus 13 ~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~---~---~-----~~~~D~v~ 78 (180)
++++++||-+|+ |.|..+..++... +++++++|.++ ..+.+++...-... |.. + . ...+|+++
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~g~~~~~--d~~~~~~~~~~~~~~~~~~~D~vi 243 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSIGGEVFI--DFTKEKDIVGAVLKATDGGAHGVI 243 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHTTCCEEE--ETTTCSCHHHHHHHHHTSCEEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHcCCceEE--ecCccHhHHHHHHHHhCCCCCEEE
Confidence 567889999998 4577777777765 67899999743 44444432111111 221 1 0 11589888
Q ss_pred eccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 79 FKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 79 ~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
.+... . ..++.+.+.|++ +|.++....
T Consensus 244 ~~~g~-----~---~~~~~~~~~l~~---~G~iv~~g~ 270 (347)
T 2hcy_A 244 NVSVS-----E---AAIEASTRYVRA---NGTTVLVGM 270 (347)
T ss_dssp ECSSC-----H---HHHHHHTTSEEE---EEEEEECCC
T ss_pred ECCCc-----H---HHHHHHHHHHhc---CCEEEEEeC
Confidence 75432 1 458888999999 898887654
No 355
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=88.77 E-value=5.4 Score=29.33 Aligned_cols=123 Identities=15% Similarity=0.112 Sum_probs=69.4
Q ss_pred eEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcc----cCCCccEEEecccccc-------
Q 030291 18 SMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQ----FIPPSDAFFFKTVFHF------- 85 (180)
Q Consensus 18 ~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~----~~~~~D~v~~~~~l~~------- 85 (180)
+++|+=||.|.++..+.+.. --.+.++|+.+ +.+-.+....-.+..+|+.+ ..+..|+++...--.-
T Consensus 2 kvidLFsG~GG~~~G~~~aG-~~~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ag~~ 80 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAG-FRIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIGGPPSQSWSEGGSL 80 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTT-CEEEEEEECCTTTHHHHHHHCCSEEEESCGGGCCGGGSCCCSEEECCCCGGGTEETTEE
T ss_pred eEEEeCcCccHHHHHHHHCC-CEEEEEEeCCHHHHHHHHHHCCCCcccCChhhCCHhhCCcccEEEecCCCCCcCCCCCc
Confidence 68999999999999988773 22346888844 33332322234567788854 3567999886321111
Q ss_pred --CChHH--HHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCC
Q 030291 86 --FDDED--CLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGF 161 (180)
Q Consensus 86 --~~~~~--~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 161 (180)
..|+. ...-+-++.+.++| - +++.|.+..-.. .......+.+.+.|++.||
T Consensus 81 ~g~~d~R~~L~~~~~r~i~~~~P----k-~~~~ENV~gl~~--------------------~~~~~~~~~i~~~l~~~GY 135 (331)
T 3ubt_Y 81 RGIDDPRGKLFYEYIRILKQKKP----I-FFLAENVKGMMA--------------------QRHNKAVQEFIQEFDNAGY 135 (331)
T ss_dssp CCTTCGGGHHHHHHHHHHHHHCC----S-EEEEEECCGGGG--------------------CTTSHHHHHHHHHHHHHTE
T ss_pred cCCCCchhHHHHHHHHHHhccCC----e-EEEeeeeccccc--------------------ccccchhhhhhhhhccCCc
Confidence 22321 11223345566777 3 344443321100 0011245677888999999
Q ss_pred eEEEE
Q 030291 162 THYKI 166 (180)
Q Consensus 162 ~~~~~ 166 (180)
.+...
T Consensus 136 ~v~~~ 140 (331)
T 3ubt_Y 136 DVHII 140 (331)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 86544
No 356
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=88.62 E-value=1.3 Score=32.99 Aligned_cols=129 Identities=12% Similarity=0.062 Sum_probs=71.9
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCC-CCeE-EEeeCch-hhccCCC-CCCeeEEecCCccc----CC--CccEEEecccc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFP-GIKC-TVLDLPH-AVTDMPQ-TDNLKYIEGDMFQF----IP--PSDAFFFKTVF 83 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~-~~~~-~~~D~~~-~~~~a~~-~~~~~~~~~d~~~~----~~--~~D~v~~~~~l 83 (180)
+..-+++|+-||.|.++..+.+..- ...+ .++|..+ +.+-.+. .+.. +.++|+.+- .+ .+|+++...--
T Consensus 8 ~~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~~~i~~~~~Dil~ggpPC 86 (327)
T 3qv2_A 8 QKQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISIKQIESLNCNTWFMSPPC 86 (327)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCHHHHHHTCCCEEEECCCC
T ss_pred CCCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCHHHhccCCCCEEEecCCc
Confidence 3456899999999999999988742 2345 6999854 4333332 1111 456777542 22 58999875443
Q ss_pred ccC-----------ChHHHHHHHHHHHH-hhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHH
Q 030291 84 HFF-----------DDEDCLKLLKKCRE-AIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQE 151 (180)
Q Consensus 84 ~~~-----------~~~~~~~~l~~~~~-~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (180)
..+ .|+ +..++.++.+ +++.....-.+++.|.+..-. ...+.+.
T Consensus 87 Q~fs~S~ag~~~~~~d~-r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~-----------------------~~~~~~~ 142 (327)
T 3qv2_A 87 QPYNNSIMSKHKDINDP-RAKSVLHLYRDILPYLINKPKHIFIENVPLFK-----------------------ESLVFKE 142 (327)
T ss_dssp TTCSHHHHTTTCTTTCG-GGHHHHHHHHTTGGGCSSCCSEEEEEECGGGG-----------------------GSHHHHH
T ss_pred cCcccccCCCCCCCccc-cchhHHHHHHHHHHHhccCCCEEEEEchhhhc-----------------------ChHHHHH
Confidence 333 222 2244555555 443200002344544332110 0113577
Q ss_pred HHHHHHHcCCeEEEEe
Q 030291 152 WGSLFVNAGFTHYKIA 167 (180)
Q Consensus 152 ~~~~l~~aGf~~~~~~ 167 (180)
+.+.|++.||.+....
T Consensus 143 i~~~l~~~GY~v~~~v 158 (327)
T 3qv2_A 143 IYNILIKNQYYIKDII 158 (327)
T ss_dssp HHHHHHHTTCEEEEEE
T ss_pred HHHHHHhCCCEEEEEE
Confidence 8889999999876543
No 357
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=88.58 E-value=0.42 Score=34.90 Aligned_cols=90 Identities=10% Similarity=-0.003 Sum_probs=56.1
Q ss_pred ccCCCeEEEeCC--cccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEec----CCcccCCCccEEEecccccc
Q 030291 13 FQGLRSMVDVGG--GTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEG----DMFQFIPPSDAFFFKTVFHF 85 (180)
Q Consensus 13 ~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~----d~~~~~~~~D~v~~~~~l~~ 85 (180)
++++++||-+|+ |.|..+..+++.. ++++++++.++ ..+.+++..--..... +..+....+|+++. ..-
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~-- 198 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG-- 198 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC--
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH--
Confidence 457889999997 4477777787776 67899999843 5544443221111211 11112256999887 321
Q ss_pred CChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 86 FDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 86 ~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
..++...+.|++ +|.++....
T Consensus 199 -------~~~~~~~~~l~~---~G~~v~~g~ 219 (302)
T 1iz0_A 199 -------KEVEESLGLLAH---GGRLVYIGA 219 (302)
T ss_dssp -------TTHHHHHTTEEE---EEEEEEC--
T ss_pred -------HHHHHHHHhhcc---CCEEEEEeC
Confidence 236778899999 888887654
No 358
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=88.56 E-value=2.4 Score=31.83 Aligned_cols=92 Identities=14% Similarity=0.160 Sum_probs=59.3
Q ss_pred ccCCCeEEEeC--CcccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEec---CCcc----cC-CCccEEEecc
Q 030291 13 FQGLRSMVDVG--GGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEG---DMFQ----FI-PPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG--~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~---d~~~----~~-~~~D~v~~~~ 81 (180)
++++++||-+| +|.|..+..+++.. ++++++++.++ .++.+++..--..+.. ++.+ .. ..+|+++-..
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~ 239 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESV 239 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECC
Confidence 56788999999 45588888888876 77899999854 5555543221112221 1111 01 2589988654
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
. . ..++.+.+.|++ +|.+++....
T Consensus 240 g-----~----~~~~~~~~~l~~---~G~iv~~g~~ 263 (362)
T 2c0c_A 240 G-----G----AMFDLAVDALAT---KGRLIVIGFI 263 (362)
T ss_dssp C-----T----HHHHHHHHHEEE---EEEEEECCCG
T ss_pred C-----H----HHHHHHHHHHhc---CCEEEEEeCC
Confidence 3 1 347888899999 8988886643
No 359
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=88.34 E-value=0.16 Score=37.86 Aligned_cols=40 Identities=15% Similarity=0.175 Sum_probs=32.5
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCC
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMP 55 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~ 55 (180)
+++..|||.-||+|..+.+..+. +.+++++|+++ ..+.++
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~~ 291 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASA 291 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHHH
Confidence 67789999999999999887777 77899999955 544443
No 360
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=88.23 E-value=2.2 Score=30.74 Aligned_cols=88 Identities=13% Similarity=0.158 Sum_probs=51.0
Q ss_pred CeEEEeCCcc-c-HHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcccCCCccEEEeccccccCChHHHHH
Q 030291 17 RSMVDVGGGT-G-AFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDDEDCLK 93 (180)
Q Consensus 17 ~~iLdiG~G~-G-~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~~~~~~ 93 (180)
.+|.=||+|. | .++..+.+..++..+++.|.+. ..+.+.+.........|..+.....|+|+.. ++......
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVila-----vp~~~~~~ 81 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILA-----VPIKKTID 81 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEEC-----SCHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEc-----CCHHHHHH
Confidence 5688888887 3 3455566664456899999843 4443332211111223332233468988873 34444457
Q ss_pred HHHHHHHh-hccCCCCcEEEE
Q 030291 94 LLKKCREA-IASNGERGKVLI 113 (180)
Q Consensus 94 ~l~~~~~~-L~p~~~~G~~~~ 113 (180)
+++++... +++ |.+++
T Consensus 82 v~~~l~~~~l~~----~~ivi 98 (290)
T 3b1f_A 82 FIKILADLDLKE----DVIIT 98 (290)
T ss_dssp HHHHHHTSCCCT----TCEEE
T ss_pred HHHHHHhcCCCC----CCEEE
Confidence 78888777 877 55554
No 361
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=87.35 E-value=0.42 Score=35.27 Aligned_cols=90 Identities=11% Similarity=0.091 Sum_probs=56.2
Q ss_pred ccCCCeEEEeC-Ccc-cHHHHHHHHHCCCCeEEEeeCchhhccCCCCCCeeEEec---C-CcccCCCccEEEeccccccC
Q 030291 13 FQGLRSMVDVG-GGT-GAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYIEG---D-MFQFIPPSDAFFFKTVFHFF 86 (180)
Q Consensus 13 ~~~~~~iLdiG-~G~-G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~---d-~~~~~~~~D~v~~~~~l~~~ 86 (180)
++++++||=+| +|. |..+..+++.. ++++++++.++..+.+++..--..+.. + +.+....+|+|+-...
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g---- 224 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVG---- 224 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSC----
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCC----
Confidence 67889999986 444 88888888876 778888875444454443111112211 1 1112346898876332
Q ss_pred ChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 87 DDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 87 ~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
.+ . +....+.|++ +|.++...
T Consensus 225 -~~---~-~~~~~~~l~~---~G~iv~~g 245 (321)
T 3tqh_A 225 -GD---V-GIQSIDCLKE---TGCIVSVP 245 (321)
T ss_dssp -HH---H-HHHHGGGEEE---EEEEEECC
T ss_pred -cH---H-HHHHHHhccC---CCEEEEeC
Confidence 22 2 4778899999 88888753
No 362
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=87.28 E-value=0.35 Score=36.10 Aligned_cols=91 Identities=10% Similarity=0.024 Sum_probs=58.1
Q ss_pred CCCeEEEeCCcc-cHHHHHHHHHC-CCCeEEEeeCch-hhccCCCCCCeeEEe----cCCcc--cCC-CccEEEeccccc
Q 030291 15 GLRSMVDVGGGT-GAFARIISEAF-PGIKCTVLDLPH-AVTDMPQTDNLKYIE----GDMFQ--FIP-PSDAFFFKTVFH 84 (180)
Q Consensus 15 ~~~~iLdiG~G~-G~~~~~l~~~~-~~~~~~~~D~~~-~~~~a~~~~~~~~~~----~d~~~--~~~-~~D~v~~~~~l~ 84 (180)
++++||-+|+|. |..+..+++.. |+++++++|.++ ..+.+++..--.++. .|... ..+ .+|+|+-...-
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~- 248 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGT- 248 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCC-
Confidence 788999999865 67777777663 478899999754 555555421111111 11111 112 59998864432
Q ss_pred cCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 85 FFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 85 ~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
+ ..++.+.+.|++ +|.++....
T Consensus 249 ----~---~~~~~~~~~l~~---~G~iv~~g~ 270 (344)
T 2h6e_A 249 ----E---ETTYNLGKLLAQ---EGAIILVGM 270 (344)
T ss_dssp ----H---HHHHHHHHHEEE---EEEEEECCC
T ss_pred ----h---HHHHHHHHHhhc---CCEEEEeCC
Confidence 2 458888999999 898887654
No 363
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=87.22 E-value=0.62 Score=34.78 Aligned_cols=93 Identities=22% Similarity=0.264 Sum_probs=57.3
Q ss_pred ccCCCeEEEeCCc--ccHHHHHHHHHCCCCeEEEeeCch-hhccCCCC-CCeeEEecC--C----cccC--CCccEEEec
Q 030291 13 FQGLRSMVDVGGG--TGAFARIISEAFPGIKCTVLDLPH-AVTDMPQT-DNLKYIEGD--M----FQFI--PPSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~G--~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~-~~~~~~~~d--~----~~~~--~~~D~v~~~ 80 (180)
++++++||-.|+| .|..+..+++...+++++++|.++ .++.+++. ....+-..+ . .+.. +.+|+++.+
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 247 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDL 247 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceEEEEC
Confidence 6678899999987 455666666654367899999744 55555431 111111111 1 0111 368998865
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
..- . ..++...+.|++ +|.+++...
T Consensus 248 ~g~-----~---~~~~~~~~~l~~---~G~iv~~g~ 272 (347)
T 1jvb_A 248 NNS-----E---KTLSVYPKALAK---QGKYVMVGL 272 (347)
T ss_dssp CCC-----H---HHHTTGGGGEEE---EEEEEECCS
T ss_pred CCC-----H---HHHHHHHHHHhc---CCEEEEECC
Confidence 432 1 457888899999 898887654
No 364
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=87.19 E-value=1.3 Score=32.99 Aligned_cols=92 Identities=14% Similarity=0.132 Sum_probs=57.5
Q ss_pred ccCCCeEEEeCC--cccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecC--Ccc----cC-C-CccEEEecc
Q 030291 13 FQGLRSMVDVGG--GTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGD--MFQ----FI-P-PSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d--~~~----~~-~-~~D~v~~~~ 81 (180)
++++++||=+|+ |.|..+..+++.. ++++++++.++ ..+.+++...-.....+ ..+ .. + .+|+++-..
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~ 235 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPI 235 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECC
Confidence 677899999997 4477888888776 77999999843 55555542111122221 111 11 2 599988644
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
.- ..+..+.+.|++ +|.+++....
T Consensus 236 g~---------~~~~~~~~~l~~---~G~iv~~G~~ 259 (342)
T 4eye_A 236 GG---------PAFDDAVRTLAS---EGRLLVVGFA 259 (342)
T ss_dssp C-----------CHHHHHHTEEE---EEEEEEC---
T ss_pred ch---------hHHHHHHHhhcC---CCEEEEEEcc
Confidence 32 237778899999 8998887543
No 365
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=87.18 E-value=1.6 Score=32.49 Aligned_cols=92 Identities=13% Similarity=0.083 Sum_probs=58.3
Q ss_pred ccCCCeEEEeCC--cccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEec---CCcc----c--CCCccEEEec
Q 030291 13 FQGLRSMVDVGG--GTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEG---DMFQ----F--IPPSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~---d~~~----~--~~~~D~v~~~ 80 (180)
++++++||-+|+ |.|..+..+++.. ++++++++.++ .++.+++...-..+.. ++.+ . ...+|+++.+
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~ 242 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDH 242 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEES
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEEC
Confidence 667889999998 5578888887776 67899999843 5554443111111111 1101 0 1259998875
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
.. . ..+..+.+.|++ +|.++.....
T Consensus 243 ~g-~--------~~~~~~~~~l~~---~G~~v~~g~~ 267 (343)
T 2eih_A 243 TG-A--------LYFEGVIKATAN---GGRIAIAGAS 267 (343)
T ss_dssp SC-S--------SSHHHHHHHEEE---EEEEEESSCC
T ss_pred CC-H--------HHHHHHHHhhcc---CCEEEEEecC
Confidence 44 2 237778899999 8888876543
No 366
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=86.95 E-value=1.7 Score=32.34 Aligned_cols=90 Identities=18% Similarity=0.204 Sum_probs=56.9
Q ss_pred CCCeEEEeCCcc-cHHHHHHHHHCCCC-eEEEeeCch-hhccCCCCCCeeEEec---CCcc----c--CCCccEEEeccc
Q 030291 15 GLRSMVDVGGGT-GAFARIISEAFPGI-KCTVLDLPH-AVTDMPQTDNLKYIEG---DMFQ----F--IPPSDAFFFKTV 82 (180)
Q Consensus 15 ~~~~iLdiG~G~-G~~~~~l~~~~~~~-~~~~~D~~~-~~~~a~~~~~~~~~~~---d~~~----~--~~~~D~v~~~~~ 82 (180)
++++||-+|+|. |..+..+++.. ++ +++++|.++ .++.+++..--..+.. ++.+ . ...+|+|+-...
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g 245 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSG 245 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence 778999999864 77777777776 66 899999754 5555543111111211 1111 0 125899886433
Q ss_pred cccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 83 FHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 83 l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
. . ..++.+.+.|++ +|.++....
T Consensus 246 ~-----~---~~~~~~~~~l~~---~G~iv~~g~ 268 (348)
T 2d8a_A 246 A-----P---KALEQGLQAVTP---AGRVSLLGL 268 (348)
T ss_dssp C-----H---HHHHHHHHHEEE---EEEEEECCC
T ss_pred C-----H---HHHHHHHHHHhc---CCEEEEEcc
Confidence 1 1 457888999999 888887654
No 367
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=86.93 E-value=0.96 Score=33.39 Aligned_cols=92 Identities=13% Similarity=0.082 Sum_probs=58.1
Q ss_pred ccCCCeEEEeCC--cccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEec---CCcc----cC--CCccEEEec
Q 030291 13 FQGLRSMVDVGG--GTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEG---DMFQ----FI--PPSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~---d~~~----~~--~~~D~v~~~ 80 (180)
++++++||=+|+ |.|..+..+++.. ++++++++.++ .++.+++...-..+.. +..+ .. ..+|+++-+
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~ 216 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDG 216 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEES
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEEC
Confidence 677899999983 4477777777765 77899999754 5555554221112211 1111 11 259998864
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
..- ..+....+.|++ +|.+++....
T Consensus 217 ~g~---------~~~~~~~~~l~~---~G~iv~~g~~ 241 (325)
T 3jyn_A 217 VGQ---------DTWLTSLDSVAP---RGLVVSFGNA 241 (325)
T ss_dssp SCG---------GGHHHHHTTEEE---EEEEEECCCT
T ss_pred CCh---------HHHHHHHHHhcC---CCEEEEEecC
Confidence 432 236778899999 8998887643
No 368
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=86.68 E-value=0.23 Score=37.40 Aligned_cols=94 Identities=19% Similarity=0.181 Sum_probs=57.3
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEec----CCcccC-CCccEEEecccccc
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEG----DMFQFI-PPSDAFFFKTVFHF 85 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~----d~~~~~-~~~D~v~~~~~l~~ 85 (180)
++++++||-+|+|. |..+..+++.. +++++++|.++ .++.+++..--.++.. +..+.. ..+|+|+-...-.
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~- 254 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSL- 254 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCS-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCC-
Confidence 66789999999855 77777777765 67899999743 5555544211112211 221111 3699988644320
Q ss_pred CChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 86 FDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 86 ~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
. . ..++.+.+.|++ +|.++....
T Consensus 255 -~-~---~~~~~~~~~l~~---~G~iv~~g~ 277 (360)
T 1piw_A 255 -T-D---IDFNIMPKAMKV---GGRIVSISI 277 (360)
T ss_dssp -T-T---CCTTTGGGGEEE---EEEEEECCC
T ss_pred -c-H---HHHHHHHHHhcC---CCEEEEecC
Confidence 0 1 225566789999 888887654
No 369
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=86.58 E-value=2.7 Score=31.37 Aligned_cols=90 Identities=17% Similarity=0.126 Sum_probs=56.3
Q ss_pred ccCCCeEEEeCC--cccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcc---------cCCCccEEEec
Q 030291 13 FQGLRSMVDVGG--GTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQ---------FIPPSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~---------~~~~~D~v~~~ 80 (180)
++++++||-.|+ |.|..+..+++.. ++++++++.++ .++.+++...-.....+-.+ ....+|+++.+
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~ 246 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEM 246 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEES
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEEC
Confidence 567889999996 4477777777765 67899999744 44444432111112111101 01258998865
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
.. . ..+....+.|++ +|.+++..
T Consensus 247 ~G-----~----~~~~~~~~~l~~---~G~iv~~g 269 (351)
T 1yb5_A 247 LA-----N----VNLSKDLSLLSH---GGRVIVVG 269 (351)
T ss_dssp CH-----H----HHHHHHHHHEEE---EEEEEECC
T ss_pred CC-----h----HHHHHHHHhccC---CCEEEEEe
Confidence 43 1 236778899999 89888765
No 370
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=86.04 E-value=0.51 Score=35.09 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=29.5
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLP 48 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~ 48 (180)
+++..|||.=||+|..+.+..+. +.+++++|++
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~ 273 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAA 273 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESS
T ss_pred CCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECC
Confidence 57789999999999999998888 6789999994
No 371
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=85.95 E-value=5.6 Score=28.46 Aligned_cols=82 Identities=13% Similarity=0.077 Sum_probs=46.8
Q ss_pred eEEEeCCcc-cH-HHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcccCC-CccEEEeccccccCChHHHHH
Q 030291 18 SMVDVGGGT-GA-FARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQFIP-PSDAFFFKTVFHFFDDEDCLK 93 (180)
Q Consensus 18 ~iLdiG~G~-G~-~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~~~-~~D~v~~~~~l~~~~~~~~~~ 93 (180)
+|.=||+|. |. ++..+.+.....+++++|.+. ..+.+++..-......|..+... ..|+|+. .++......
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVil-----avp~~~~~~ 77 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML-----SSPVRTFRE 77 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE-----CSCHHHHHH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEE-----cCCHHHHHH
Confidence 567788776 33 344444442223799999843 44444322211111234433445 7899887 345555557
Q ss_pred HHHHHHHhhcc
Q 030291 94 LLKKCREAIAS 104 (180)
Q Consensus 94 ~l~~~~~~L~p 104 (180)
++.++...+++
T Consensus 78 v~~~l~~~l~~ 88 (281)
T 2g5c_A 78 IAKKLSYILSE 88 (281)
T ss_dssp HHHHHHHHSCT
T ss_pred HHHHHHhhCCC
Confidence 88888888988
No 372
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=85.74 E-value=3.8 Score=29.29 Aligned_cols=84 Identities=14% Similarity=0.107 Sum_probs=47.7
Q ss_pred eEEEeCCcc-cH-HHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcccCCCccEEEeccccccCChHHHHHH
Q 030291 18 SMVDVGGGT-GA-FARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDDEDCLKL 94 (180)
Q Consensus 18 ~iLdiG~G~-G~-~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~~~~~~~ 94 (180)
+|.=||+|. |. ++..+.+. +.+++++|.+. ..+.+.+..-......|..+. ...|+|+.. +++.....+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~a-----v~~~~~~~~ 73 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLC-----TPIQLILPT 73 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEEC-----SCHHHHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEE-----CCHHHHHHH
Confidence 466688776 33 34444444 45789999843 444333211111123344334 678998873 444455577
Q ss_pred HHHHHHhhccCCCCcEEEE
Q 030291 95 LKKCREAIASNGERGKVLI 113 (180)
Q Consensus 95 l~~~~~~L~p~~~~G~~~~ 113 (180)
++++...+++ |.+++
T Consensus 74 ~~~l~~~~~~----~~~vv 88 (279)
T 2f1k_A 74 LEKLIPHLSP----TAIVT 88 (279)
T ss_dssp HHHHGGGSCT----TCEEE
T ss_pred HHHHHhhCCC----CCEEE
Confidence 8888888887 55554
No 373
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=85.69 E-value=4.7 Score=25.07 Aligned_cols=86 Identities=14% Similarity=0.187 Sum_probs=47.2
Q ss_pred CeEEEeCCcccHHHHHHHHHC--CCCeEEEeeCch-hhccCCCCCCeeEEecCCcc-------cCCCccEEEeccccccC
Q 030291 17 RSMVDVGGGTGAFARIISEAF--PGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQ-------FIPPSDAFFFKTVFHFF 86 (180)
Q Consensus 17 ~~iLdiG~G~G~~~~~l~~~~--~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~-------~~~~~D~v~~~~~l~~~ 86 (180)
.+|+=+|+|. .+..+++.. .+.+++.+|.++ ..+..++..++.+..+|..+ ....+|+|+..-
T Consensus 5 m~i~IiG~G~--iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~----- 77 (140)
T 1lss_A 5 MYIIIAGIGR--VGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT----- 77 (140)
T ss_dssp CEEEEECCSH--HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC-----
T ss_pred CEEEEECCCH--HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEee-----
Confidence 5688888754 433333221 256899999843 44433322245566666533 134689888753
Q ss_pred ChHHHHHHHHHHHHhhccCCCCcEEEE
Q 030291 87 DDEDCLKLLKKCREAIASNGERGKVLI 113 (180)
Q Consensus 87 ~~~~~~~~l~~~~~~L~p~~~~G~~~~ 113 (180)
++......+..+.+.+++ +.++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~----~~ii~ 100 (140)
T 1lss_A 78 GKEEVNLMSSLLAKSYGI----NKTIA 100 (140)
T ss_dssp SCHHHHHHHHHHHHHTTC----CCEEE
T ss_pred CCchHHHHHHHHHHHcCC----CEEEE
Confidence 222323445566666777 45554
No 374
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=85.48 E-value=2 Score=32.31 Aligned_cols=92 Identities=20% Similarity=0.193 Sum_probs=55.2
Q ss_pred cc-CCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCC-CCCCeeEEec-CC--cc-cCCCccEEEeccccc
Q 030291 13 FQ-GLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMP-QTDNLKYIEG-DM--FQ-FIPPSDAFFFKTVFH 84 (180)
Q Consensus 13 ~~-~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~-~~~~~~~~~~-d~--~~-~~~~~D~v~~~~~l~ 84 (180)
.. ++++||=+|+|. |..+..+++.. ++++++++.++ ..+.++ +..--.++.. +. .. ....+|+|+-.....
T Consensus 184 ~~~~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~ 262 (366)
T 1yqd_A 184 LDEPGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAV 262 (366)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcH
Confidence 44 778899999765 67777777776 67899999744 444443 3211112211 11 01 123689988644321
Q ss_pred cCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 85 FFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 85 ~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
..++...+.|++ +|.++....
T Consensus 263 --------~~~~~~~~~l~~---~G~iv~~g~ 283 (366)
T 1yqd_A 263 --------HPLLPLFGLLKS---HGKLILVGA 283 (366)
T ss_dssp --------CCSHHHHHHEEE---EEEEEECCC
T ss_pred --------HHHHHHHHHHhc---CCEEEEEcc
Confidence 124566788999 888887654
No 375
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=85.23 E-value=2.7 Score=33.16 Aligned_cols=126 Identities=17% Similarity=0.206 Sum_probs=70.8
Q ss_pred cCCCeEEEeC-CcccHH--HHHHHHHCCCCeEEEeeCc-h-hhccCCCCCCeeEEecCCcccCCCccEEEeccccccCCh
Q 030291 14 QGLRSMVDVG-GGTGAF--ARIISEAFPGIKCTVLDLP-H-AVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDD 88 (180)
Q Consensus 14 ~~~~~iLdiG-~G~G~~--~~~l~~~~~~~~~~~~D~~-~-~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~ 88 (180)
...++|+=|| +|+|.. ++.|.+. +.++++.|.. . ..+..+ ...+.+..+.-.+....+|+|+.+-.+.. .+
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~--G~~V~~~D~~~~~~~~~l~-~~gi~~~~g~~~~~~~~~d~vV~Spgi~~-~~ 95 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANE--GYQISGSDLAPNSVTQHLT-ALGAQIYFHHRPENVLDASVVVVSTAISA-DN 95 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHT--TCEEEEECSSCCHHHHHHH-HTTCEEESSCCGGGGTTCSEEEECTTSCT-TC
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhC--CCeEEEEECCCCHHHHHHH-HCCCEEECCCCHHHcCCCCEEEECCCCCC-CC
Confidence 3457888888 456763 4444555 8889999973 2 333332 23566665533234557999888766532 22
Q ss_pred HHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCe
Q 030291 89 EDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFT 162 (180)
Q Consensus 89 ~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 162 (180)
+. +.+++ +. |.-++.+.-. +.+..........++.+++..|..-+..+|+++|+.
T Consensus 96 p~----~~~a~---~~----gi~v~~~~e~--------l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~~ 150 (494)
T 4hv4_A 96 PE----IVAAR---EA----RIPVIRRAEM--------LAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAGLD 150 (494)
T ss_dssp HH----HHHHH---HT----TCCEEEHHHH--------HHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHTTCC
T ss_pred HH----HHHHH---HC----CCCEEcHHHH--------HHHHhcCCCEEEEecCCChHHHHHHHHHHHHhcCCC
Confidence 32 33333 22 4445543100 111111112344566778888888889999999985
No 376
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=84.56 E-value=3.1 Score=32.33 Aligned_cols=91 Identities=11% Similarity=-0.004 Sum_probs=57.3
Q ss_pred ccCCCeEEEeCC-c-ccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEe---cCCc-----------------c
Q 030291 13 FQGLRSMVDVGG-G-TGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIE---GDMF-----------------Q 69 (180)
Q Consensus 13 ~~~~~~iLdiG~-G-~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~---~d~~-----------------~ 69 (180)
++++++||=+|+ | .|.++..+++.. ++++++++.++ .++.+++..--.++. .|.. +
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~ 304 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGK 304 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHH
Confidence 678899999997 3 477888888876 77888888744 555555411111111 1110 1
Q ss_pred ------cCCCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 70 ------FIPPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 70 ------~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
....+|+|+-... . ..+....++|++ +|.+++...
T Consensus 305 ~i~~~t~g~g~Dvvid~~G-----~----~~~~~~~~~l~~---~G~iv~~G~ 345 (456)
T 3krt_A 305 RIRELTGGEDIDIVFEHPG-----R----ETFGASVFVTRK---GGTITTCAS 345 (456)
T ss_dssp HHHHHHTSCCEEEEEECSC-----H----HHHHHHHHHEEE---EEEEEESCC
T ss_pred HHHHHhCCCCCcEEEEcCC-----c----hhHHHHHHHhhC---CcEEEEEec
Confidence 1125898876332 2 347888899999 898887643
No 377
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=84.56 E-value=2.1 Score=31.98 Aligned_cols=91 Identities=18% Similarity=0.135 Sum_probs=57.3
Q ss_pred ccCCCeEEEeCC--cccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEec---CCcc-----cCCCccEEEecc
Q 030291 13 FQGLRSMVDVGG--GTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEG---DMFQ-----FIPPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~---d~~~-----~~~~~D~v~~~~ 81 (180)
++++++||-+|+ |.|..+..+++.. +++++++|.++ .++.+++...-..+.. +..+ ....+|+++.+.
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~ 243 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMI 243 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESC
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECC
Confidence 678899999953 4477777777776 77999999744 5555554211111211 1111 112599988754
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
.- ..+....+.|++ +|.+++...
T Consensus 244 g~---------~~~~~~~~~l~~---~G~iv~~g~ 266 (353)
T 4dup_A 244 GA---------AYFERNIASLAK---DGCLSIIAF 266 (353)
T ss_dssp CG---------GGHHHHHHTEEE---EEEEEECCC
T ss_pred CH---------HHHHHHHHHhcc---CCEEEEEEe
Confidence 32 236778889999 898887653
No 378
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=84.55 E-value=3.6 Score=28.27 Aligned_cols=86 Identities=10% Similarity=0.149 Sum_probs=50.0
Q ss_pred eEEEeCCcccHHHHHHHHHC--CCCeEEEeeCch-hhccCCCCCCeeEEecCCccc-------CCCccEEEeccccccCC
Q 030291 18 SMVDVGGGTGAFARIISEAF--PGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQF-------IPPSDAFFFKTVFHFFD 87 (180)
Q Consensus 18 ~iLdiG~G~G~~~~~l~~~~--~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~-------~~~~D~v~~~~~l~~~~ 87 (180)
+|+=+|+ |.++..+++.. .+..++.+|..+ ..+...+..++.++.+|..+. ...+|++++.. +
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~-----~ 74 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILT-----P 74 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECC-----S
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEec-----C
Confidence 3555665 55555444332 266799999844 454433333567888888652 34689888742 3
Q ss_pred hHHHHHHHHHHHHhhccCCCCcEEEE
Q 030291 88 DEDCLKLLKKCREAIASNGERGKVLI 113 (180)
Q Consensus 88 ~~~~~~~l~~~~~~L~p~~~~G~~~~ 113 (180)
++.....+....+.+.+ ...++.
T Consensus 75 ~d~~n~~~~~~a~~~~~---~~~iia 97 (218)
T 3l4b_C 75 RDEVNLFIAQLVMKDFG---VKRVVS 97 (218)
T ss_dssp CHHHHHHHHHHHHHTSC---CCEEEE
T ss_pred CcHHHHHHHHHHHHHcC---CCeEEE
Confidence 34434556666666666 455554
No 379
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=84.53 E-value=5.6 Score=30.62 Aligned_cols=90 Identities=16% Similarity=0.164 Sum_probs=56.4
Q ss_pred CCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCccc-------CCCccEEEeccccccC
Q 030291 16 LRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQF-------IPPSDAFFFKTVFHFF 86 (180)
Q Consensus 16 ~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~-------~~~~D~v~~~~~l~~~ 86 (180)
..+|+=+|+|. |......+... +..++++|... .++.+++ ..+.++.+|..+. ....|+|++..
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~-g~~vvvId~d~~~v~~~~~-~g~~vi~GDat~~~~L~~agi~~A~~viv~~----- 76 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS-GVKMVVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAI----- 76 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEECCHHHHHHHHH-TTCCCEESCTTCHHHHHHTTTTTCSEEEECC-----
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHh-CCCeEEEcCCCCHHHHHhcCCCccCEEEECC-----
Confidence 34677788765 44333333332 67899999954 6665553 3566788888652 23688887733
Q ss_pred ChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 87 DDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 87 ~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
++......+....+.+.| ...++.-.
T Consensus 77 ~~~~~n~~i~~~ar~~~p---~~~Iiara 102 (413)
T 3l9w_A 77 DDPQTNLQLTEMVKEHFP---HLQIIARA 102 (413)
T ss_dssp SSHHHHHHHHHHHHHHCT---TCEEEEEE
T ss_pred CChHHHHHHHHHHHHhCC---CCeEEEEE
Confidence 344444557777788888 56666643
No 380
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=84.52 E-value=1.2 Score=33.41 Aligned_cols=92 Identities=17% Similarity=0.222 Sum_probs=55.5
Q ss_pred cc-CCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCC-CCCCeeEEec-CC--cc-cCCCccEEEeccccc
Q 030291 13 FQ-GLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMP-QTDNLKYIEG-DM--FQ-FIPPSDAFFFKTVFH 84 (180)
Q Consensus 13 ~~-~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~-~~~~~~~~~~-d~--~~-~~~~~D~v~~~~~l~ 84 (180)
.. ++++||=+|+|. |..+..+++.. +++++++|.++ ..+.++ +..--.++.. +. .. ....+|+|+-...-.
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~ 255 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVH 255 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCCh
Confidence 45 788999999765 67777777765 67899999854 554444 3111111211 11 01 123589988643311
Q ss_pred cCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 85 FFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 85 ~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
..+....+.|++ +|.++....
T Consensus 256 --------~~~~~~~~~l~~---~G~iv~~G~ 276 (357)
T 2cf5_A 256 --------HALEPYLSLLKL---DGKLILMGV 276 (357)
T ss_dssp --------CCSHHHHTTEEE---EEEEEECSC
T ss_pred --------HHHHHHHHHhcc---CCEEEEeCC
Confidence 125567789999 898887654
No 381
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=84.28 E-value=1.4 Score=32.75 Aligned_cols=88 Identities=14% Similarity=0.233 Sum_probs=54.7
Q ss_pred CCCeEEEeC-Ccc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEec--CCcc----c-CCCccEEEeccccc
Q 030291 15 GLRSMVDVG-GGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEG--DMFQ----F-IPPSDAFFFKTVFH 84 (180)
Q Consensus 15 ~~~~iLdiG-~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~--d~~~----~-~~~~D~v~~~~~l~ 84 (180)
++++||=+| +|. |..+..+++.. ++++++++.++ .++.+++..--..+.. +..+ . ...+|+|+-...
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g-- 226 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFN-- 226 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSC--
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCC--
Confidence 678899884 443 77788888776 77999999844 5555554111111111 1111 1 125898886322
Q ss_pred cCChHHHHHHHHHHHHhhccCCCCcEEEEE
Q 030291 85 FFDDEDCLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 85 ~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
.. ..+..+.++|++ +|.++..
T Consensus 227 ---~~---~~~~~~~~~l~~---~G~iv~~ 247 (346)
T 3fbg_A 227 ---TD---MYYDDMIQLVKP---RGHIATI 247 (346)
T ss_dssp ---HH---HHHHHHHHHEEE---EEEEEES
T ss_pred ---ch---HHHHHHHHHhcc---CCEEEEE
Confidence 22 557888999999 8888664
No 382
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=84.11 E-value=2.7 Score=31.40 Aligned_cols=91 Identities=12% Similarity=0.043 Sum_probs=55.8
Q ss_pred ccCCCeEEEeCC--cccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEec-C--Ccc----cC--CCccEEEec
Q 030291 13 FQGLRSMVDVGG--GTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEG-D--MFQ----FI--PPSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~-d--~~~----~~--~~~D~v~~~ 80 (180)
++++++||-.|+ |.|..+..++... +++++++|.++ .++.+++...-..... + ..+ .. ..+|+++.+
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 238 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDC 238 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEEC
Confidence 667889999984 4577777777765 77899999744 5554433111111111 1 101 11 258998865
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
..- + .+....+.|++ +|.+++...
T Consensus 239 ~G~-----~----~~~~~~~~l~~---~G~iv~~G~ 262 (354)
T 2j8z_A 239 IGG-----S----YWEKNVNCLAL---DGRWVLYGL 262 (354)
T ss_dssp SCG-----G----GHHHHHHHEEE---EEEEEECCC
T ss_pred CCc-----h----HHHHHHHhccC---CCEEEEEec
Confidence 432 1 26677889999 898888654
No 383
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=83.23 E-value=2.8 Score=31.34 Aligned_cols=86 Identities=19% Similarity=0.230 Sum_probs=54.4
Q ss_pred CeEEEeCCcc-cHHH-HHHH-HHCCCCe-EEEeeCc-h---hhccCCCCCCeeEEecCCcc-c-------CCCccEEEec
Q 030291 17 RSMVDVGGGT-GAFA-RIIS-EAFPGIK-CTVLDLP-H---AVTDMPQTDNLKYIEGDMFQ-F-------IPPSDAFFFK 80 (180)
Q Consensus 17 ~~iLdiG~G~-G~~~-~~l~-~~~~~~~-~~~~D~~-~---~~~~a~~~~~~~~~~~d~~~-~-------~~~~D~v~~~ 80 (180)
++||=+|+|. |.++ ..++ +.. +++ ++++|.+ + ..+.+++.. .+.. |..+ . .+.+|+|+-.
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~lG-a~~v--~~~~~~~~~i~~~~gg~Dvvid~ 249 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEELD-ATYV--DSRQTPVEDVPDVYEQMDFIYEA 249 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHHTT-CEEE--ETTTSCGGGHHHHSCCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHHcC-Cccc--CCCccCHHHHHHhCCCCCEEEEC
Confidence 8999999754 6777 7777 654 666 9999974 3 455554422 2222 2211 0 1258888753
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
.. .. ..++.+.+.|++ +|.++.....
T Consensus 250 ~g-----~~---~~~~~~~~~l~~---~G~iv~~g~~ 275 (357)
T 2b5w_A 250 TG-----FP---KHAIQSVQALAP---NGVGALLGVP 275 (357)
T ss_dssp SC-----CH---HHHHHHHHHEEE---EEEEEECCCC
T ss_pred CC-----Ch---HHHHHHHHHHhc---CCEEEEEeCC
Confidence 32 22 357888999999 8988887543
No 384
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=82.94 E-value=2.1 Score=31.55 Aligned_cols=91 Identities=9% Similarity=0.019 Sum_probs=55.6
Q ss_pred ccCCCeEEEeCC--cccHHHHHHHHHCCCCeEEEeeCch-hhccCCCC-CCeeEEecC--Ccc----c--CCCccEEEec
Q 030291 13 FQGLRSMVDVGG--GTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQT-DNLKYIEGD--MFQ----F--IPPSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~-~~~~~~~~d--~~~----~--~~~~D~v~~~ 80 (180)
++++++||-.|+ |.|..+..+++.. +++++++|.++ .++.+++. ....+-..+ ..+ . ...+|+++.+
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 216 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDS 216 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEEC
Confidence 667889999994 4466666666654 67899999754 44444431 111111111 101 0 1258998875
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
.. . ..++.+.+.|++ +|.+++...
T Consensus 217 ~g-----~----~~~~~~~~~l~~---~G~iv~~g~ 240 (327)
T 1qor_A 217 VG-----R----DTWERSLDCLQR---RGLMVSFGN 240 (327)
T ss_dssp SC-----G----GGHHHHHHTEEE---EEEEEECCC
T ss_pred Cc-----h----HHHHHHHHHhcC---CCEEEEEec
Confidence 43 1 347888899999 898887654
No 385
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=82.10 E-value=3.7 Score=30.28 Aligned_cols=91 Identities=10% Similarity=-0.019 Sum_probs=56.9
Q ss_pred ccCCCeEEEeCC--cccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEec-C--Ccc------cCCCccEEEec
Q 030291 13 FQGLRSMVDVGG--GTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEG-D--MFQ------FIPPSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~-d--~~~------~~~~~D~v~~~ 80 (180)
++++++||-.|+ |.|..+..++... +++++++|.++ .++.+++...-..... + ..+ ....+|+++.+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~ 221 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDS 221 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEEC
Confidence 567889999994 5577777777765 67899999854 4544443111111111 1 101 01258998865
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
..- ..++.+.+.|++ +|.++....
T Consensus 222 ~g~---------~~~~~~~~~l~~---~G~iv~~g~ 245 (333)
T 1wly_A 222 IGK---------DTLQKSLDCLRP---RGMCAAYGH 245 (333)
T ss_dssp SCT---------TTHHHHHHTEEE---EEEEEECCC
T ss_pred CcH---------HHHHHHHHhhcc---CCEEEEEec
Confidence 431 237778899999 888887654
No 386
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=81.62 E-value=12 Score=26.54 Aligned_cols=93 Identities=13% Similarity=0.026 Sum_probs=54.4
Q ss_pred CeEEEeCCcccHHHHHHHHHC--CCCeEEEeeCch-hhccCCCCCCeeEEecCCcc-cCCCccEEEeccccccCChHHHH
Q 030291 17 RSMVDVGGGTGAFARIISEAF--PGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQ-FIPPSDAFFFKTVFHFFDDEDCL 92 (180)
Q Consensus 17 ~~iLdiG~G~G~~~~~l~~~~--~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~-~~~~~D~v~~~~~l~~~~~~~~~ 92 (180)
.+||=.|+ |.++..+.+.+ .+.++++++-+. ...... ..+++++.+|+.+ ....+|+|+.........++...
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~~~~d~vi~~a~~~~~~~~~~~ 82 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR-ASGAEPLLWPGEEPSLDGVTHLLISTAPDSGGDPVLA 82 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH-HTTEEEEESSSSCCCCTTCCEEEECCCCBTTBCHHHH
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh-hCCCeEEEecccccccCCCCEEEECCCccccccHHHH
Confidence 57898994 87777766553 356788888643 222111 2568888888854 24468998886665443333333
Q ss_pred HHHHHHHHhhccCCCCcEEEEEE
Q 030291 93 KLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 93 ~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
.+++.+.+.-.. -..+++..
T Consensus 83 ~l~~a~~~~~~~---~~~~v~~S 102 (286)
T 3ius_A 83 ALGDQIAARAAQ---FRWVGYLS 102 (286)
T ss_dssp HHHHHHHHTGGG---CSEEEEEE
T ss_pred HHHHHHHhhcCC---ceEEEEee
Confidence 445554443122 25555544
No 387
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=81.00 E-value=2.2 Score=31.76 Aligned_cols=62 Identities=19% Similarity=0.139 Sum_probs=40.7
Q ss_pred CCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC-CCCeeEEecCCcc----cCCCccEEEec
Q 030291 16 LRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ-TDNLKYIEGDMFQ----FIPPSDAFFFK 80 (180)
Q Consensus 16 ~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-~~~~~~~~~d~~~----~~~~~D~v~~~ 80 (180)
..+++|+-||.|.++..+.+.. -..+.++|..+ +.+-.+. .+... ++|+.+ ..+.+|+++..
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG-~~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~~~~~~~D~l~~g 78 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG-AECVYSNEWDKYAQEVYEMNFGEKP--EGDITQVNEKTIPDHDILCAG 78 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT-CEEEEEECCCHHHHHHHHHHHSCCC--BSCGGGSCGGGSCCCSEEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHCC-CeEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHcCHhhCCCCCEEEEC
Confidence 4689999999999999998874 23467899854 4333322 11111 567754 24569999874
No 388
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=80.91 E-value=0.85 Score=35.41 Aligned_cols=34 Identities=26% Similarity=0.393 Sum_probs=26.7
Q ss_pred CCeEEEeCCcccHHHHHHHHHC---C--CCeEEEeeCch
Q 030291 16 LRSMVDVGGGTGAFARIISEAF---P--GIKCTVLDLPH 49 (180)
Q Consensus 16 ~~~iLdiG~G~G~~~~~l~~~~---~--~~~~~~~D~~~ 49 (180)
+-+|+|+|+|.|.++..++... . ..+++.+|.|.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp 176 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSG 176 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTS
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCH
Confidence 5689999999999988876542 1 24799999865
No 389
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=80.55 E-value=3.5 Score=30.21 Aligned_cols=85 Identities=18% Similarity=0.144 Sum_probs=48.2
Q ss_pred HHHHHCCCCeEEEeeC----ch-hhccCCCCCCeeEE-ecCCcccC--CCccEEEecc----cccc-C--ChH-HH-HHH
Q 030291 32 IISEAFPGIKCTVLDL----PH-AVTDMPQTDNLKYI-EGDMFQFI--PPSDAFFFKT----VFHF-F--DDE-DC-LKL 94 (180)
Q Consensus 32 ~l~~~~~~~~~~~~D~----~~-~~~~a~~~~~~~~~-~~d~~~~~--~~~D~v~~~~----~l~~-~--~~~-~~-~~~ 94 (180)
.++.+.++.++..+|. +. .+++..-....++. ..|+..+. +.+|+|++.. .-|| - .|. .. .-+
T Consensus 157 ~~~~k~~g~~vl~v~~~~~~p~k~v~wi~Pi~GAt~~~~lDfg~p~~~~k~DvV~SDMApn~sGh~yqQC~DHarii~La 236 (320)
T 2hwk_A 157 SFVSKLKGRTVLVVGEKLSVPGKMVDWLSDRPEATFRARLDLGIPGDVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSML 236 (320)
T ss_dssp HHHHTSSCSEEEEEESCCCCTTSEEEEEESSTTCSEECCGGGCSCTTSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHT
T ss_pred HHHhhCCCcEEEEEecccccCCceeEeeccCCCceeecccccCCccccCcCCEEEEcCCCCCCCccccccchHHHHHHHH
Confidence 3555566777877762 22 33333334455555 67775532 4699999854 3344 1 121 11 124
Q ss_pred HHHHHHhhccCCCCcEEEEEEeeeC
Q 030291 95 LKKCREAIASNGERGKVLIIDIVID 119 (180)
Q Consensus 95 l~~~~~~L~p~~~~G~~~~~~~~~~ 119 (180)
+.-..++|+| ||.++.-.+...
T Consensus 237 l~fA~~vLkP---GGtfV~Kvygga 258 (320)
T 2hwk_A 237 TKKACLHLNP---GGTCVSIGYGYA 258 (320)
T ss_dssp HHHHGGGEEE---EEEEEEEECCCC
T ss_pred HHHHHHhcCC---CceEEEEEecCC
Confidence 5566699999 787777655433
No 390
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=80.35 E-value=3.2 Score=30.27 Aligned_cols=55 Identities=9% Similarity=0.208 Sum_probs=33.8
Q ss_pred CCCeeEEecCCccc---C--CCccEEEeccccc----cCCh--------------HHHHHHHHHHHHhhccCCCCcEEEE
Q 030291 57 TDNLKYIEGDMFQF---I--PPSDAFFFKTVFH----FFDD--------------EDCLKLLKKCREAIASNGERGKVLI 113 (180)
Q Consensus 57 ~~~~~~~~~d~~~~---~--~~~D~v~~~~~l~----~~~~--------------~~~~~~l~~~~~~L~p~~~~G~~~~ 113 (180)
..+++++++|..+. . .++|+|+++=-.. +... .....+++++.++|+| ||.+++
T Consensus 19 ~~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~---~G~l~i 95 (297)
T 2zig_A 19 FGVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVP---GGRLVI 95 (297)
T ss_dssp --CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEE
T ss_pred ccCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCC---CcEEEE
Confidence 34678888888652 2 3699999852221 1000 0123578899999999 888777
Q ss_pred E
Q 030291 114 I 114 (180)
Q Consensus 114 ~ 114 (180)
.
T Consensus 96 ~ 96 (297)
T 2zig_A 96 V 96 (297)
T ss_dssp E
T ss_pred E
Confidence 5
No 391
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=80.31 E-value=4.5 Score=29.20 Aligned_cols=89 Identities=9% Similarity=0.025 Sum_probs=52.3
Q ss_pred CeEEEeCCcc-cH-HHHHHHHHC-CCCeEEEeeCch-hhccCCCCCCeeEEecCCcccCCCccEEEeccccccCChHHHH
Q 030291 17 RSMVDVGGGT-GA-FARIISEAF-PGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDDEDCL 92 (180)
Q Consensus 17 ~~iLdiG~G~-G~-~~~~l~~~~-~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~~~~~ 92 (180)
.+|.=||||. |. ++..+.+.. +...++..|.+. .++...+.-++.. ..|..+.....|+|+..- ++....
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~-~~~~~~~~~~aDvVilav-----~p~~~~ 77 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHT-TQDNRQGALNADVVVLAV-----KPHQIK 77 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEE-ESCHHHHHSSCSEEEECS-----CGGGHH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEE-eCChHHHHhcCCeEEEEe-----CHHHHH
Confidence 4677888876 33 444455542 222788999843 4444433223433 223323345689988743 445556
Q ss_pred HHHHHHHHh-hccCCCCcEEEEEE
Q 030291 93 KLLKKCREA-IASNGERGKVLIID 115 (180)
Q Consensus 93 ~~l~~~~~~-L~p~~~~G~~~~~~ 115 (180)
++++++... +++ +.++++.
T Consensus 78 ~vl~~l~~~~l~~----~~iiiS~ 97 (280)
T 3tri_A 78 MVCEELKDILSET----KILVISL 97 (280)
T ss_dssp HHHHHHHHHHHTT----TCEEEEC
T ss_pred HHHHHHHhhccCC----CeEEEEe
Confidence 889999988 876 6566643
No 392
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=80.01 E-value=3.6 Score=30.56 Aligned_cols=51 Identities=18% Similarity=0.245 Sum_probs=38.0
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCC----CCeEEEeeCchhhccCCCCCCeeEEec
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFP----GIKCTVLDLPHAVTDMPQTDNLKYIEG 65 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~----~~~~~~~D~~~~~~~a~~~~~~~~~~~ 65 (180)
++..|+=+|++.|.....|.+.++ ..++..+|....-...++..+++++..
T Consensus 75 ~g~~VVYaGsAPG~HI~fL~~lF~~l~~~lkwvLiDp~~f~~~Le~~~ni~li~~ 129 (348)
T 1vpt_A 75 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPILNGLRDVTLVTR 129 (348)
T ss_dssp TTCEEEEESCSSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGGGTTCTTEEEEEC
T ss_pred CCCeEEEeCcCCcchHHHHHHHhhhcCCceEEEEECCCchhhhhcCCCcEEeehh
Confidence 356999999999999988888765 479999998553334444557776655
No 393
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=79.82 E-value=4.7 Score=29.01 Aligned_cols=84 Identities=15% Similarity=0.305 Sum_probs=49.3
Q ss_pred CeEEEeCC-cc-cH-HHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcccCCCccEEEeccccccCChHHHH
Q 030291 17 RSMVDVGG-GT-GA-FARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDDEDCL 92 (180)
Q Consensus 17 ~~iLdiG~-G~-G~-~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~~~~~ 92 (180)
.+|.=||+ |. |. ++..+.+. +.+++++|.+. ..+.+.+. .+.. .+..+.....|+|+.. +++....
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~-g~~~--~~~~~~~~~aDvVi~a-----v~~~~~~ 81 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS--AHHLAAIEIAPEGRDRLQGM-GIPL--TDGDGWIDEADVVVLA-----LPDNIIE 81 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS--SSEEEEECCSHHHHHHHHHT-TCCC--CCSSGGGGTCSEEEEC-----SCHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHhc-CCCc--CCHHHHhcCCCEEEEc-----CCchHHH
Confidence 47888988 75 43 44445444 56788999743 43333221 1221 2332334468998873 3444456
Q ss_pred HHHHHHHHhhccCCCCcEEEEE
Q 030291 93 KLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 93 ~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
++++++...+++ |.+++.
T Consensus 82 ~v~~~l~~~l~~----~~ivv~ 99 (286)
T 3c24_A 82 KVAEDIVPRVRP----GTIVLI 99 (286)
T ss_dssp HHHHHHGGGSCT----TCEEEE
T ss_pred HHHHHHHHhCCC----CCEEEE
Confidence 778888888887 555553
No 394
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=79.74 E-value=5.4 Score=30.78 Aligned_cols=91 Identities=13% Similarity=-0.018 Sum_probs=57.0
Q ss_pred ccCCCeEEEeCC--cccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEE---ecCCc------------------
Q 030291 13 FQGLRSMVDVGG--GTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYI---EGDMF------------------ 68 (180)
Q Consensus 13 ~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~---~~d~~------------------ 68 (180)
++++++||=.|+ |.|..+..+++.. ++++++++.++ .++.+++..--..+ ..|+.
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLA 296 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHH
Confidence 678899999996 3377777787776 77888888744 55555432111111 11110
Q ss_pred c-----cCCCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 69 Q-----FIPPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 69 ~-----~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
+ ....+|+++-... . ..+....+.+++ +|.+++...
T Consensus 297 ~~v~~~~g~g~Dvvid~~G-----~----~~~~~~~~~l~~---~G~iv~~G~ 337 (447)
T 4a0s_A 297 KLVVEKAGREPDIVFEHTG-----R----VTFGLSVIVARR---GGTVVTCGS 337 (447)
T ss_dssp HHHHHHHSSCCSEEEECSC-----H----HHHHHHHHHSCT---TCEEEESCC
T ss_pred HHHHHHhCCCceEEEECCC-----c----hHHHHHHHHHhc---CCEEEEEec
Confidence 0 1125899886433 2 246778889999 899888653
No 395
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=78.90 E-value=16 Score=27.40 Aligned_cols=90 Identities=12% Similarity=0.034 Sum_probs=55.7
Q ss_pred cCCCeEEEeCCc--ccHHHHHHHHHCCCCeEEEeeCchhhccCCCCCCeeEEec---CCcc-----cCCCccEEEecccc
Q 030291 14 QGLRSMVDVGGG--TGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYIEG---DMFQ-----FIPPSDAFFFKTVF 83 (180)
Q Consensus 14 ~~~~~iLdiG~G--~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~---d~~~-----~~~~~D~v~~~~~l 83 (180)
.++.+||=+|++ .|..+..+++.. +++++++..++..+.+++..--.++.. |+.+ ..+.+|+++-.-.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g- 240 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCIT- 240 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSC-
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCC-
Confidence 678899999983 588888888876 778877753335555554322222221 1111 0124898875332
Q ss_pred ccCChHHHHHHHHHHHHhh-ccCCCCcEEEEEE
Q 030291 84 HFFDDEDCLKLLKKCREAI-ASNGERGKVLIID 115 (180)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~L-~p~~~~G~~~~~~ 115 (180)
.+ ..+..+.+.| ++ +|.++...
T Consensus 241 ----~~---~~~~~~~~~l~~~---~G~iv~~g 263 (371)
T 3gqv_A 241 ----NV---ESTTFCFAAIGRA---GGHYVSLN 263 (371)
T ss_dssp ----SH---HHHHHHHHHSCTT---CEEEEESS
T ss_pred ----ch---HHHHHHHHHhhcC---CCEEEEEe
Confidence 22 4577788888 58 89888765
No 396
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=78.67 E-value=7.1 Score=28.94 Aligned_cols=90 Identities=17% Similarity=0.074 Sum_probs=56.4
Q ss_pred ccCCCeEEEeCC--cccHHHHHHHHHCCCCeEEEeeCchhhccCCCCCCeeEEec--CCcc------cCCCccEEEeccc
Q 030291 13 FQGLRSMVDVGG--GTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYIEG--DMFQ------FIPPSDAFFFKTV 82 (180)
Q Consensus 13 ~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~--d~~~------~~~~~D~v~~~~~ 82 (180)
++++++||=+|+ |.|..+..+++.. +++++++..++.++.+++..- ..+.. +..+ ....+|+++-...
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~lGa-~~i~~~~~~~~~~~~~~~~~g~D~vid~~g 225 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALAR-GARVFATARGSDLEYVRDLGA-TPIDASREPEDYAAEHTAGQGFDLVYDTLG 225 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECHHHHHHHHHHTS-EEEETTSCHHHHHHHHHTTSCEEEEEESSC
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCHHHHHHHHHcCC-CEeccCCCHHHHHHHHhcCCCceEEEECCC
Confidence 678899999994 3477888888776 778888832335555554211 11221 1111 0125999886433
Q ss_pred cccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 83 FHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 83 l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
. ..+....+.|++ +|.++....
T Consensus 226 -----~----~~~~~~~~~l~~---~G~iv~~g~ 247 (343)
T 3gaz_A 226 -----G----PVLDASFSAVKR---FGHVVSCLG 247 (343)
T ss_dssp -----T----HHHHHHHHHEEE---EEEEEESCC
T ss_pred -----c----HHHHHHHHHHhc---CCeEEEEcc
Confidence 1 347888899999 888887643
No 397
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=77.43 E-value=13 Score=24.53 Aligned_cols=89 Identities=11% Similarity=0.116 Sum_probs=47.6
Q ss_pred CCeEEEeCCcc-cHH-HHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcc-----c---CCCccEEEeccccc
Q 030291 16 LRSMVDVGGGT-GAF-ARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQ-----F---IPPSDAFFFKTVFH 84 (180)
Q Consensus 16 ~~~iLdiG~G~-G~~-~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~-----~---~~~~D~v~~~~~l~ 84 (180)
..+|+=+|+|. |.. +..|.+.. +..++++|.++ ..+.+++ ..+....+|..+ . ...+|+|+...
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~-g~~V~vid~~~~~~~~~~~-~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~--- 113 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARY-GKISLGIEIREEAAQQHRS-EGRNVISGDATDPDFWERILDTGHVKLVLLAM--- 113 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHH-CSCEEEEESCHHHHHHHHH-TTCCEEECCTTCHHHHHTBCSCCCCCEEEECC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhcc-CCeEEEEECCHHHHHHHHH-CCCCEEEcCCCCHHHHHhccCCCCCCEEEEeC---
Confidence 45788888765 432 23333331 45699999844 4444432 245566666633 1 33588888732
Q ss_pred cCChHHHHHHHHHHHHhhccCCCCcEEEEE
Q 030291 85 FFDDEDCLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 85 ~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
++......+....+.+.| +..++..
T Consensus 114 --~~~~~~~~~~~~~~~~~~---~~~ii~~ 138 (183)
T 3c85_A 114 --PHHQGNQTALEQLQRRNY---KGQIAAI 138 (183)
T ss_dssp --SSHHHHHHHHHHHHHTTC---CSEEEEE
T ss_pred --CChHHHHHHHHHHHHHCC---CCEEEEE
Confidence 222222333445555666 5666653
No 398
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=76.78 E-value=10 Score=26.77 Aligned_cols=87 Identities=16% Similarity=0.336 Sum_probs=50.0
Q ss_pred CeEEEeCCcc-cH-HHHHHHHHCCCCe-EEEeeCch-hhccCCCCCCeeEEecCCcccCCCccEEEeccccccCChHHHH
Q 030291 17 RSMVDVGGGT-GA-FARIISEAFPGIK-CTVLDLPH-AVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDDEDCL 92 (180)
Q Consensus 17 ~~iLdiG~G~-G~-~~~~l~~~~~~~~-~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~~~~~ 92 (180)
.+|.=||+|. |. ++..+.+. +.. +..+|.+. ..+...+.-++.. ..|..+.....|+|+.. +++....
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~Dvvi~a-----v~~~~~~ 82 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK--GFRIVQVYSRTEESARELAQKVEAEY-TTDLAEVNPYAKLYIVS-----LKDSAFA 82 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSHHHHHHHHHHTTCEE-ESCGGGSCSCCSEEEEC-----CCHHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCce-eCCHHHHhcCCCEEEEe-----cCHHHHH
Confidence 4688899875 33 44445555 445 78888743 4433332212332 23442334568998873 3444445
Q ss_pred HHHHHHHHhhccCCCCcEEEEEE
Q 030291 93 KLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 93 ~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
++++++...+++ |.+++..
T Consensus 83 ~v~~~l~~~~~~----~~ivv~~ 101 (266)
T 3d1l_A 83 ELLQGIVEGKRE----EALMVHT 101 (266)
T ss_dssp HHHHHHHTTCCT----TCEEEEC
T ss_pred HHHHHHHhhcCC----CcEEEEC
Confidence 778888888877 6665543
No 399
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=75.81 E-value=4.3 Score=35.20 Aligned_cols=104 Identities=10% Similarity=0.034 Sum_probs=65.1
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC-CCCeeEEecCCccc----CCCccEEEeccccccCC-
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ-TDNLKYIEGDMFQF----IPPSDAFFFKTVFHFFD- 87 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-~~~~~~~~~d~~~~----~~~~D~v~~~~~l~~~~- 87 (180)
.....+||+|.|.-.-...|. -+...++.+|.....+.... ..+.+|+..|++.+ ...+|.+.|...|..-.
T Consensus 820 ~~~~~~lDlGTGPE~RiLsLi--P~~~pvtm~D~RP~ae~~~~w~~~T~f~~~DyL~~~~~~~~~~D~vt~i~SLGAA~A 897 (1289)
T 1ej6_A 820 YDGDVVLDLGTGPEAKILELI--PATSPVTCVDIRPTAQPSGCWNVRTTFLELDYLSDGWITGVRGDIVTCMLSLGAAAA 897 (1289)
T ss_dssp CTTCCEEEESCCSSCGGGGTS--CTTSCEEEEESSCCCSCSTTBSSCEEEEESCTTSSSCGGGCCCSEEEECSCHHHHHH
T ss_pred cccceEEEccCCCcceeeeec--CCCCceEEecccCchhhhccccccceeeEccccccceeecCCCcEEEEEeechhhhh
Confidence 357789999988843222222 24667999998544444333 45589999999763 24699999876654321
Q ss_pred --hHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCC
Q 030291 88 --DEDCLKLLKKCREAIASNGERGKVLIIDIVIDEK 121 (180)
Q Consensus 88 --~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~ 121 (180)
+-...+.++++.+..++. |...++...+.+-.
T Consensus 898 ~a~~tl~~~~~q~l~~~~~~--~~~~l~lQlNcpL~ 931 (1289)
T 1ej6_A 898 GKSMTFDAAFQQLIKVLSKS--TANVVLVQVNCPTD 931 (1289)
T ss_dssp HHTCCHHHHHHHHHHHHHTS--CCSEEEEECCCCSS
T ss_pred ccCCcHHHHHHHHHHHHHhc--CccEEEEEecCCCC
Confidence 112335667777666663 66777777665543
No 400
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=74.99 E-value=11 Score=28.32 Aligned_cols=92 Identities=14% Similarity=0.063 Sum_probs=55.0
Q ss_pred ccCCCeEEEeC--CcccHHHHHHHHHCCCCeEEEeeCchhhccCCCCCCeeEEec---CCcc---cCCCccEEEeccccc
Q 030291 13 FQGLRSMVDVG--GGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYIEG---DMFQ---FIPPSDAFFFKTVFH 84 (180)
Q Consensus 13 ~~~~~~iLdiG--~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~---d~~~---~~~~~D~v~~~~~l~ 84 (180)
.+++++||=+| +|.|..+..+++.. ++++++++.++..+.+++..--..+.. ++.+ ....+|+++-...
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g-- 257 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVG-- 257 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSC--
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEeChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCC--
Confidence 45678999998 33478888888776 678888885334444443221111211 1111 1235899886433
Q ss_pred cCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 85 FFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 85 ~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
... ..+....+.+++ +|.++...
T Consensus 258 ---~~~--~~~~~~~~~l~~---~G~iv~~g 280 (375)
T 2vn8_A 258 ---GST--ETWAPDFLKKWS---GATYVTLV 280 (375)
T ss_dssp ---TTH--HHHGGGGBCSSS---CCEEEESC
T ss_pred ---Chh--hhhHHHHHhhcC---CcEEEEeC
Confidence 221 235667788999 89988765
No 401
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=74.98 E-value=5.5 Score=29.16 Aligned_cols=68 Identities=9% Similarity=-0.035 Sum_probs=45.3
Q ss_pred ccCCCeEEEeCCcccHHHHHHHHHCCCCe-EEEeeCch-hhccCCC-CCCeeEEecCCccc-------CCCccEEEec
Q 030291 13 FQGLRSMVDVGGGTGAFARIISEAFPGIK-CTVLDLPH-AVTDMPQ-TDNLKYIEGDMFQF-------IPPSDAFFFK 80 (180)
Q Consensus 13 ~~~~~~iLdiG~G~G~~~~~l~~~~~~~~-~~~~D~~~-~~~~a~~-~~~~~~~~~d~~~~-------~~~~D~v~~~ 80 (180)
.+..-+++|+=||.|.++..+.+..-... +.++|..+ ...-.+. .+...+..+|+.+. .+.+|+++..
T Consensus 13 ~~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~gg 90 (295)
T 2qrv_A 13 KRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGG 90 (295)
T ss_dssp CCCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEEC
T ss_pred cCCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEec
Confidence 45567899999999999999988743322 48899854 3322221 34455778888542 1368999864
No 402
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=74.61 E-value=4.7 Score=29.62 Aligned_cols=91 Identities=12% Similarity=0.070 Sum_probs=54.1
Q ss_pred ccCCC-eEEEeCC--cccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEe-cCC----ccc--CCCccEEEecc
Q 030291 13 FQGLR-SMVDVGG--GTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIE-GDM----FQF--IPPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~-~iLdiG~--G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~-~d~----~~~--~~~~D~v~~~~ 81 (180)
++++. +||-+|+ |.|..+..+++.. ++++++++.++ .++.+++..--..+. .+. ... ...+|+++-..
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~ 224 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPV 224 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECS
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECC
Confidence 44454 7999996 4477888888776 67899998743 445444321111111 111 011 12589887643
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
. . ..+....+.+++ +|.+++...
T Consensus 225 g-----~----~~~~~~~~~l~~---~G~~v~~G~ 247 (328)
T 1xa0_A 225 G-----G----RTLATVLSRMRY---GGAVAVSGL 247 (328)
T ss_dssp T-----T----TTHHHHHHTEEE---EEEEEECSC
T ss_pred c-----H----HHHHHHHHhhcc---CCEEEEEee
Confidence 2 1 126778889999 899887654
No 403
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=73.73 E-value=4.1 Score=30.96 Aligned_cols=92 Identities=11% Similarity=0.016 Sum_probs=53.3
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCCCCCeeEEecCCccc-CCCccEEEeccccccCCh----H
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYIEGDMFQF-IPPSDAFFFKTVFHFFDD----E 89 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~d~~~~-~~~~D~v~~~~~l~~~~~----~ 89 (180)
...+||.++-+.|.++..+. +..+++.+.-+.....+.+...+.....+-.+. ...||+|+. ++|. .
T Consensus 45 ~~~~~l~~n~~~g~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~v~~-----~~Pk~k~~~ 116 (381)
T 3dmg_A 45 FGERALDLNPGVGWGSLPLE---GRMAVERLETSRAAFRCLTASGLQARLALPWEAAAGAYDLVVL-----ALPAGRGTA 116 (381)
T ss_dssp CSSEEEESSCTTSTTTGGGB---TTBEEEEEECBHHHHHHHHHTTCCCEECCGGGSCTTCEEEEEE-----ECCGGGCHH
T ss_pred hCCcEEEecCCCCccccccC---CCCceEEEeCcHHHHHHHHHcCCCccccCCccCCcCCCCEEEE-----ECCcchhHH
Confidence 34689999999998776653 234566554333111111111111111222233 336999887 4442 2
Q ss_pred HHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 90 DCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 90 ~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
.....|.++.+.|+| ||.+++..-.
T Consensus 117 ~~~~~l~~~~~~l~~---g~~i~~~g~~ 141 (381)
T 3dmg_A 117 YVQASLVAAARALRM---GGRLYLAGDK 141 (381)
T ss_dssp HHHHHHHHHHHHEEE---EEEEEEEEEG
T ss_pred HHHHHHHHHHHhCCC---CCEEEEEEcc
Confidence 345779999999999 8888887643
No 404
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=73.48 E-value=13 Score=27.49 Aligned_cols=92 Identities=12% Similarity=0.132 Sum_probs=56.1
Q ss_pred ccCC--CeEEEeCC--cccHHHHHHHHHCCCC-eEEEeeCch-hhccCCC-CCCeeEEec-C--Ccc----cC-CCccEE
Q 030291 13 FQGL--RSMVDVGG--GTGAFARIISEAFPGI-KCTVLDLPH-AVTDMPQ-TDNLKYIEG-D--MFQ----FI-PPSDAF 77 (180)
Q Consensus 13 ~~~~--~~iLdiG~--G~G~~~~~l~~~~~~~-~~~~~D~~~-~~~~a~~-~~~~~~~~~-d--~~~----~~-~~~D~v 77 (180)
++++ ++||-.|+ |.|..+..++... ++ ++++++.++ ..+.+++ ......... + ..+ .. ..+|++
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~v 234 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVY 234 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCEEEE
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCCCEE
Confidence 5667 89999997 4466676777665 67 899999853 4444432 111111111 1 100 01 158888
Q ss_pred EeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 78 FFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 78 ~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
+.+.. . ..+..+.+.|++ +|.+++....
T Consensus 235 i~~~G-----~----~~~~~~~~~l~~---~G~iv~~G~~ 262 (357)
T 2zb4_A 235 FDNVG-----G----NISDTVISQMNE---NSHIILCGQI 262 (357)
T ss_dssp EESCC-----H----HHHHHHHHTEEE---EEEEEECCCG
T ss_pred EECCC-----H----HHHHHHHHHhcc---CcEEEEECCc
Confidence 86544 1 457888999999 8998886543
No 405
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=73.44 E-value=15 Score=23.41 Aligned_cols=88 Identities=18% Similarity=0.189 Sum_probs=51.3
Q ss_pred CCeEEEeCCcccHHHHHHHHHC--CCCeEEEeeCc-h-hhccCCC--CCCeeEEecCCccc-------CCCccEEEeccc
Q 030291 16 LRSMVDVGGGTGAFARIISEAF--PGIKCTVLDLP-H-AVTDMPQ--TDNLKYIEGDMFQF-------IPPSDAFFFKTV 82 (180)
Q Consensus 16 ~~~iLdiG~G~G~~~~~l~~~~--~~~~~~~~D~~-~-~~~~a~~--~~~~~~~~~d~~~~-------~~~~D~v~~~~~ 82 (180)
..+|+=+|+ |..+..+++.. .+..++.+|.. + ..+.... ..++.++.+|..++ ....|+|++..
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~- 79 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS- 79 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS-
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEec-
Confidence 345777776 45554443331 26679999973 2 2222221 34578888988542 34689888743
Q ss_pred cccCChHHHHHHHHHHHHhhccCCCCcEEEE
Q 030291 83 FHFFDDEDCLKLLKKCREAIASNGERGKVLI 113 (180)
Q Consensus 83 l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~ 113 (180)
++......+....+.+.| ...++.
T Consensus 80 ----~~d~~n~~~~~~a~~~~~---~~~ii~ 103 (153)
T 1id1_A 80 ----DNDADNAFVVLSAKDMSS---DVKTVL 103 (153)
T ss_dssp ----SCHHHHHHHHHHHHHHTS---SSCEEE
T ss_pred ----CChHHHHHHHHHHHHHCC---CCEEEE
Confidence 233334556677777766 566655
No 406
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=73.16 E-value=6.4 Score=28.77 Aligned_cols=86 Identities=14% Similarity=0.132 Sum_probs=54.0
Q ss_pred eEEEeCC--cccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEe-cCC--ccc--CCCccEEEeccccccCChH
Q 030291 18 SMVDVGG--GTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIE-GDM--FQF--IPPSDAFFFKTVFHFFDDE 89 (180)
Q Consensus 18 ~iLdiG~--G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~-~d~--~~~--~~~~D~v~~~~~l~~~~~~ 89 (180)
+||=+|+ +.|..+..+++.. ++++++++.++ ..+.+++..--..+. .+. ... ...+|+++-. ...
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~-----~g~- 221 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDT-----VGD- 221 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEES-----SCH-
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEEC-----CCc-
Confidence 4998886 4488888888876 77999999744 555555411111111 111 111 1258887653 222
Q ss_pred HHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 90 DCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 90 ~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
..+....+.|++ +|.++....
T Consensus 222 ---~~~~~~~~~l~~---~G~iv~~G~ 242 (324)
T 3nx4_A 222 ---KVLAKVLAQMNY---GGCVAACGL 242 (324)
T ss_dssp ---HHHHHHHHTEEE---EEEEEECCC
T ss_pred ---HHHHHHHHHHhc---CCEEEEEec
Confidence 258889999999 899888653
No 407
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=72.95 E-value=17 Score=28.59 Aligned_cols=53 Identities=15% Similarity=0.109 Sum_probs=34.3
Q ss_pred CCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCch-hhccCCC----CCCeeEEecCCcc
Q 030291 16 LRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQ----TDNLKYIEGDMFQ 69 (180)
Q Consensus 16 ~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~----~~~~~~~~~d~~~ 69 (180)
.-+++|+=||.|.++..+.+.. ...+.++|..+ +..-.+. .+...+++.|+.+
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG-~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~ 145 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIG-GQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRD 145 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTT-EEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHH
T ss_pred cceEEEecCCccHHHHHHHHCC-CEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhh
Confidence 4589999999999999988763 22367888844 3222221 2345566777743
No 408
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=72.83 E-value=6.4 Score=28.35 Aligned_cols=89 Identities=16% Similarity=0.206 Sum_probs=51.3
Q ss_pred CeEEEeCCcc-cH-HHHHHHHHCCCCeEEEeeCch-hhccCCCC------------------------CCeeEEecCCcc
Q 030291 17 RSMVDVGGGT-GA-FARIISEAFPGIKCTVLDLPH-AVTDMPQT------------------------DNLKYIEGDMFQ 69 (180)
Q Consensus 17 ~~iLdiG~G~-G~-~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~------------------------~~~~~~~~d~~~ 69 (180)
.+|.=||+|. |. ++..++.. +..++..|.++ .++.+.+. .+++. ..|..+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~ 81 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH--GFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQ 81 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHH
Confidence 5677788876 32 33344444 67899999854 54444321 12222 233322
Q ss_pred cCCCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 70 FIPPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 70 ~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
.....|+|+..-.- .......+++++...++| +.+++..
T Consensus 82 ~~~~aDlVi~av~~---~~~~~~~v~~~l~~~~~~----~~il~s~ 120 (283)
T 4e12_A 82 AVKDADLVIEAVPE---SLDLKRDIYTKLGELAPA----KTIFATN 120 (283)
T ss_dssp HTTTCSEEEECCCS---CHHHHHHHHHHHHHHSCT----TCEEEEC
T ss_pred HhccCCEEEEeccC---cHHHHHHHHHHHHhhCCC----CcEEEEC
Confidence 35678998874321 112445778999999988 6666543
No 409
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=72.29 E-value=19 Score=24.13 Aligned_cols=94 Identities=14% Similarity=0.193 Sum_probs=51.7
Q ss_pred eEEEeCCcccHHHHHHHHHC--CCCeEEEeeCch-hhccCCCCCCeeEEecCCccc----CCCccEEEeccccccCChHH
Q 030291 18 SMVDVGGGTGAFARIISEAF--PGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQF----IPPSDAFFFKTVFHFFDDED 90 (180)
Q Consensus 18 ~iLdiG~G~G~~~~~l~~~~--~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~----~~~~D~v~~~~~l~~~~~~~ 90 (180)
+||=.|+ +|.+...+++.+ .+.++++++-+. ...... .+++++.+|+.+. ....|+|+.+.....-....
T Consensus 2 kvlVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~ 78 (221)
T 3ew7_A 2 KIGIIGA-TGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEK 78 (221)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTS
T ss_pred eEEEEcC-CchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccChhhhhhcCCCEEEECCcCCccccch
Confidence 4665553 444444443331 267788888733 333222 6788999999653 24689998866543222111
Q ss_pred HHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 91 CLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 91 ~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
.......+.++++..+ .+.+++..
T Consensus 79 ~~~~~~~l~~a~~~~~-~~~~v~~S 102 (221)
T 3ew7_A 79 HVTSLDHLISVLNGTV-SPRLLVVG 102 (221)
T ss_dssp HHHHHHHHHHHHCSCC-SSEEEEEC
T ss_pred HHHHHHHHHHHHHhcC-CceEEEEe
Confidence 2244566666666521 35566543
No 410
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=72.26 E-value=3.1 Score=31.23 Aligned_cols=88 Identities=14% Similarity=0.220 Sum_probs=53.6
Q ss_pred CCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeC-c---hhhccCCCCCCeeEEec-CCccc----CCCccEEEecccccc
Q 030291 16 LRSMVDVGGGT-GAFARIISEAFPGIKCTVLDL-P---HAVTDMPQTDNLKYIEG-DMFQF----IPPSDAFFFKTVFHF 85 (180)
Q Consensus 16 ~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~-~---~~~~~a~~~~~~~~~~~-d~~~~----~~~~D~v~~~~~l~~ 85 (180)
+++||-+|+|. |..+..+++.. +++++++|. + +..+.+++.. .+.... ++.+. ...+|+++.....
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~~~g-a~~v~~~~~~~~~~~~~~~~d~vid~~g~-- 256 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIEETK-TNYYNSSNGYDKLKDSVGKFDVIIDATGA-- 256 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHHHHT-CEEEECTTCSHHHHHHHCCEEEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHHHhC-CceechHHHHHHHHHhCCCCCEEEECCCC--
Confidence 78999999844 56666666654 668999997 3 4444443311 121111 22111 1358998875432
Q ss_pred CChHHHHHHH-HHHHHhhccCCCCcEEEEEEe
Q 030291 86 FDDEDCLKLL-KKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 86 ~~~~~~~~~l-~~~~~~L~p~~~~G~~~~~~~ 116 (180)
. ..+ +...+.|++ +|.+++...
T Consensus 257 ---~---~~~~~~~~~~l~~---~G~iv~~g~ 279 (366)
T 2cdc_A 257 ---D---VNILGNVIPLLGR---NGVLGLFGF 279 (366)
T ss_dssp ---C---THHHHHHGGGEEE---EEEEEECSC
T ss_pred ---h---HHHHHHHHHHHhc---CCEEEEEec
Confidence 1 235 788899999 888887654
No 411
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=72.03 E-value=2 Score=32.72 Aligned_cols=40 Identities=23% Similarity=0.229 Sum_probs=28.3
Q ss_pred CCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCC
Q 030291 15 GLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMP 55 (180)
Q Consensus 15 ~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~ 55 (180)
++.+|+=+|+|. |..+..++... +++++++|.+. .++.++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~ 224 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL-GAKTTGYDVRPEVAEQVR 224 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSGGGHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH
Confidence 467899999987 66666655555 77899999844 444443
No 412
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=71.81 E-value=19 Score=30.28 Aligned_cols=89 Identities=11% Similarity=0.082 Sum_probs=55.7
Q ss_pred ccCCCeEEEeCC--cccHHHHHHHHHCCCCeEEEeeCchhhccCCCCCCeeEEe---cCCcc----c--CCCccEEEecc
Q 030291 13 FQGLRSMVDVGG--GTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYIE---GDMFQ----F--IPPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~~iLdiG~--G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~---~d~~~----~--~~~~D~v~~~~ 81 (180)
++++.+||=.|+ |.|..+..+++.. ++++++++.++..+..+ ...-.++. .|+.+ . ...+|+|+-+.
T Consensus 343 l~~G~~VLI~gaaGgvG~~aiqlAk~~-Ga~V~~t~~~~k~~~l~-lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~ 420 (795)
T 3slk_A 343 LRPGESLLVHSAAGGVGMAAIQLARHL-GAEVYATASEDKWQAVE-LSREHLASSRTCDFEQQFLGATGGRGVDVVLNSL 420 (795)
T ss_dssp CCTTCCEEEESTTBHHHHHHHHHHHHT-TCCEEEECCGGGGGGSC-SCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECC
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHc-CCEEEEEeChHHhhhhh-cChhheeecCChhHHHHHHHHcCCCCeEEEEECC
Confidence 678899999984 5588888888887 77898888644222222 11111111 12211 1 12599998743
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
. . ..+....+.|++ +|+++...
T Consensus 421 g-----g----~~~~~~l~~l~~---~Gr~v~iG 442 (795)
T 3slk_A 421 A-----G----EFADASLRMLPR---GGRFLELG 442 (795)
T ss_dssp C-----T----TTTHHHHTSCTT---CEEEEECC
T ss_pred C-----c----HHHHHHHHHhcC---CCEEEEec
Confidence 2 1 236778899999 89988864
No 413
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=71.77 E-value=16 Score=26.38 Aligned_cols=80 Identities=13% Similarity=0.051 Sum_probs=44.7
Q ss_pred CCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEe-cCCcccCCCccEEEeccccccCChHHH
Q 030291 15 GLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIE-GDMFQFIPPSDAFFFKTVFHFFDDEDC 91 (180)
Q Consensus 15 ~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~-~d~~~~~~~~D~v~~~~~l~~~~~~~~ 91 (180)
.+++|+=||+|. |......+..+ +.++++.|.+. ..+.+.+. ..+... .+..+.....|+|+..-..+.+..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~-g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~--- 228 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAAL-GAKVKVGARESDLLARIAEM-GMEPFHISKAAQELRDVDVCINTIPALVVTA--- 228 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-TSEEEEGGGHHHHTTTCSEEEECCSSCCBCH---
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHC-CCeecChhhHHHHhcCCCEEEECCChHHhCH---
Confidence 467899999876 44444444445 66899999843 33222211 223222 222223567999998665543332
Q ss_pred HHHHHHHHHhhcc
Q 030291 92 LKLLKKCREAIAS 104 (180)
Q Consensus 92 ~~~l~~~~~~L~p 104 (180)
+..+.++|
T Consensus 229 -----~~l~~mk~ 236 (293)
T 3d4o_A 229 -----NVLAEMPS 236 (293)
T ss_dssp -----HHHHHSCT
T ss_pred -----HHHHhcCC
Confidence 13346788
No 414
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=71.53 E-value=8.9 Score=28.33 Aligned_cols=88 Identities=14% Similarity=0.275 Sum_probs=48.1
Q ss_pred CeEEEeCCcc-cH-HHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeE-------------EecCCcccCCCccEEEec
Q 030291 17 RSMVDVGGGT-GA-FARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKY-------------IEGDMFQFIPPSDAFFFK 80 (180)
Q Consensus 17 ~~iLdiG~G~-G~-~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~-------------~~~d~~~~~~~~D~v~~~ 80 (180)
.+|.=||+|. |. ++..|.+. +..++.+|.++ .++..++...+.+ ...|..+....+|+|+..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 82 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 82 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEe
Confidence 5788899876 43 33444444 56789998743 4433322111111 112221123468988874
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
-- .....++++.+...+++ |.+++..
T Consensus 83 v~-----~~~~~~~~~~l~~~l~~----~~~vv~~ 108 (359)
T 1bg6_A 83 VP-----AIHHASIAANIASYISE----GQLIILN 108 (359)
T ss_dssp SC-----GGGHHHHHHHHGGGCCT----TCEEEES
T ss_pred CC-----chHHHHHHHHHHHhCCC----CCEEEEc
Confidence 33 22234778888888988 5555543
No 415
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=70.82 E-value=1.8 Score=33.28 Aligned_cols=40 Identities=18% Similarity=0.238 Sum_probs=29.5
Q ss_pred CCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCC
Q 030291 15 GLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMP 55 (180)
Q Consensus 15 ~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~ 55 (180)
++.+|+=+|+|. |..+..++... +++++++|... .++.++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~ 230 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRPAAKEQVA 230 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSTTHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHH
Confidence 468899999987 66666667666 78999999854 444443
No 416
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=70.62 E-value=23 Score=24.36 Aligned_cols=88 Identities=8% Similarity=0.040 Sum_probs=54.4
Q ss_pred cCCCeEEEeCCcccHHHHHHHHHCC--CCeEEEeeCch-hhccCCCCCCeeEEecCCccc-------CCCccEEEecccc
Q 030291 14 QGLRSMVDVGGGTGAFARIISEAFP--GIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQF-------IPPSDAFFFKTVF 83 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~~l~~~~~--~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~-------~~~~D~v~~~~~l 83 (180)
....+|+=+|+ |..+..+++... +. ++++|.++ .++.++ .++.++.+|..+. ....|.+++..
T Consensus 7 ~~~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~-- 79 (234)
T 2aef_A 7 AKSRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR--SGANFVHGDPTRVSDLEKANVRGARAVIVDL-- 79 (234)
T ss_dssp ---CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--TTCEEEESCTTCHHHHHHTTCTTCSEEEECC--
T ss_pred CCCCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--cCCeEEEcCCCCHHHHHhcCcchhcEEEEcC--
Confidence 34567888877 577777776652 45 88888743 444444 4588889988642 34689888743
Q ss_pred ccCChHHHHHHHHHHHHhhccCCCCcEEEEE
Q 030291 84 HFFDDEDCLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
++......+....+.+.| +..++..
T Consensus 80 ---~~d~~n~~~~~~a~~~~~---~~~iia~ 104 (234)
T 2aef_A 80 ---ESDSETIHCILGIRKIDE---SVRIIAE 104 (234)
T ss_dssp ---SCHHHHHHHHHHHHHHCS---SSEEEEE
T ss_pred ---CCcHHHHHHHHHHHHHCC---CCeEEEE
Confidence 333333456666777887 4465553
No 417
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=70.22 E-value=11 Score=27.75 Aligned_cols=126 Identities=18% Similarity=0.110 Sum_probs=69.2
Q ss_pred CCCeEEEeCC-cccHH--HHHHHHHCCCCeEEEeeCch---hhccCCCCCCeeEEecCCcccC--CCccEEEeccccccC
Q 030291 15 GLRSMVDVGG-GTGAF--ARIISEAFPGIKCTVLDLPH---AVTDMPQTDNLKYIEGDMFQFI--PPSDAFFFKTVFHFF 86 (180)
Q Consensus 15 ~~~~iLdiG~-G~G~~--~~~l~~~~~~~~~~~~D~~~---~~~~a~~~~~~~~~~~d~~~~~--~~~D~v~~~~~l~~~ 86 (180)
..++|.=||. |+|.. +..+.+. +.++++.|... ..+..+ ...+.+..+.-.+.. ..+|+|+.+-.+..
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~--G~~V~~~D~~~~~~~~~~L~-~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~- 78 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEA--GFEVSGCDAKMYPPMSTQLE-ALGIDVYEGFDAAQLDEFKADVYVIGNVAKR- 78 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHT--TCEEEEEESSCCTTHHHHHH-HTTCEEEESCCGGGGGSCCCSEEEECTTCCT-
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhC--CCEEEEEcCCCCcHHHHHHH-hCCCEEECCCCHHHcCCCCCCEEEECCCcCC-
Confidence 3467888886 55653 3334444 78899999732 222222 235666655332333 36899888766532
Q ss_pred ChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhh-hhhccceeeEeecCCcccCHHHHHHHHHHcCCeE
Q 030291 87 DDEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTE-SKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTH 163 (180)
Q Consensus 87 ~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 163 (180)
.++ .+.+++ +. |.-++.+.-. +.+ ..........++.+++..+..-+..+|+++|...
T Consensus 79 ~~p----~~~~a~---~~----gi~v~~~~e~--------~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g~~~ 137 (326)
T 3eag_A 79 GMD----VVEAIL---NL----GLPYISGPQW--------LSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAGLAP 137 (326)
T ss_dssp TCH----HHHHHH---HT----TCCEEEHHHH--------HHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTTCCC
T ss_pred CCH----HHHHHH---Hc----CCcEEeHHHH--------HHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcCCCc
Confidence 122 233333 22 4445543100 111 0111223455667788888888889999999864
No 418
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=70.16 E-value=15 Score=28.53 Aligned_cols=93 Identities=17% Similarity=0.241 Sum_probs=49.8
Q ss_pred CeEEEeCCcc-cH-HHHHHHHHCCCCeEEEeeCch-hhccCCC-------------------CCCeeEEecCCcccCCCc
Q 030291 17 RSMVDVGGGT-GA-FARIISEAFPGIKCTVLDLPH-AVTDMPQ-------------------TDNLKYIEGDMFQFIPPS 74 (180)
Q Consensus 17 ~~iLdiG~G~-G~-~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------------------~~~~~~~~~d~~~~~~~~ 74 (180)
.+|.=||+|. |. ++..|++. +.+++++|.++ .++..++ ..++++ ..|..+.....
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~--G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea~~~a 79 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL--GANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQAVPEA 79 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHHGGGC
T ss_pred CEEEEECcCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHHHhcC
Confidence 3577787765 33 33344444 56899999843 4333322 112222 23332224468
Q ss_pred cEEEeccccc----cCCh-HHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 75 DAFFFKTVFH----FFDD-EDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 75 D~v~~~~~l~----~~~~-~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
|+|+..---. .-+| .....+++.+.+.+++ |.+++...
T Consensus 80 DvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~----g~iVV~~S 122 (450)
T 3gg2_A 80 DIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSR----YILIVTKS 122 (450)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCS----CEEEEECS
T ss_pred CEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCC----CCEEEEee
Confidence 8887632111 0011 1445778889999988 66666544
No 419
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=69.86 E-value=8.8 Score=26.84 Aligned_cols=65 Identities=20% Similarity=0.133 Sum_probs=40.2
Q ss_pred cCCCeEEEeCCcccHHHH--HHHHHCCCCeEEEeeCc--hhhccCCCCCCeeEEecCCcc-cCCCccEEEec
Q 030291 14 QGLRSMVDVGGGTGAFAR--IISEAFPGIKCTVLDLP--HAVTDMPQTDNLKYIEGDMFQ-FIPPSDAFFFK 80 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~~~~--~l~~~~~~~~~~~~D~~--~~~~~a~~~~~~~~~~~d~~~-~~~~~D~v~~~ 80 (180)
-.+.+||=||+|.=.... .|++. ++.++.++.. +.+....+..++++....+.. .+..+|+|++.
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~--GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaA 98 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQE--GAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVA 98 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGG--CCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEEC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEEC
Confidence 346789999998633222 23333 6778888862 223222224568888777744 45679999874
No 420
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=69.42 E-value=15 Score=26.70 Aligned_cols=80 Identities=10% Similarity=0.089 Sum_probs=45.3
Q ss_pred CCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEe-cCCcccCCCccEEEeccccccCChHHH
Q 030291 15 GLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIE-GDMFQFIPPSDAFFFKTVFHFFDDEDC 91 (180)
Q Consensus 15 ~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~-~d~~~~~~~~D~v~~~~~l~~~~~~~~ 91 (180)
.+.+|+=||+|. |......+..+ +.++++.|.+. ..+.+.+. .++... .+..+.....|+|+..-..+.+...
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~~~~~~~~~~~-g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~~-- 231 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAAL-GANVKVGARSSAHLARITEM-GLVPFHTDELKEHVKDIDICINTIPSMILNQT-- 231 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-TCEEEEGGGHHHHSTTCSEEEECCSSCCBCHH--
T ss_pred CCCEEEEEcccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHC-CCeEEchhhHHHHhhCCCEEEECCChhhhCHH--
Confidence 467899999876 44444444444 67899999843 33222111 222221 2332235679999987666444321
Q ss_pred HHHHHHHHHhhcc
Q 030291 92 LKLLKKCREAIAS 104 (180)
Q Consensus 92 ~~~l~~~~~~L~p 104 (180)
..+.++|
T Consensus 232 ------~~~~mk~ 238 (300)
T 2rir_A 232 ------VLSSMTP 238 (300)
T ss_dssp ------HHTTSCT
T ss_pred ------HHHhCCC
Confidence 3357888
No 421
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=69.31 E-value=27 Score=24.67 Aligned_cols=64 Identities=25% Similarity=0.359 Sum_probs=42.7
Q ss_pred CeEEEeCCcccH---HHHHHHHHCCCCeEEEeeCch-hhc-cCCCCCCeeEEecCCccc-------------CCCccEEE
Q 030291 17 RSMVDVGGGTGA---FARIISEAFPGIKCTVLDLPH-AVT-DMPQTDNLKYIEGDMFQF-------------IPPSDAFF 78 (180)
Q Consensus 17 ~~iLdiG~G~G~---~~~~l~~~~~~~~~~~~D~~~-~~~-~a~~~~~~~~~~~d~~~~-------------~~~~D~v~ 78 (180)
++||=-|++.|. .++.|++. ++++...|.++ .++ .+++..++.++++|+.++ .+..|+++
T Consensus 3 K~vlVTGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV 80 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEA--GDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV 80 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 456666766663 45556666 78899999844 333 334467888899999652 24689988
Q ss_pred eccc
Q 030291 79 FKTV 82 (180)
Q Consensus 79 ~~~~ 82 (180)
.+..
T Consensus 81 NNAG 84 (247)
T 3ged_A 81 NNAC 84 (247)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 7653
No 422
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=68.57 E-value=10 Score=27.96 Aligned_cols=55 Identities=16% Similarity=0.270 Sum_probs=34.5
Q ss_pred CCCeeEEecCCcc---cCC--CccEEEecccccc-----CCh-------HHHHHHHHHHHHhhccCCCCcEEEEE
Q 030291 57 TDNLKYIEGDMFQ---FIP--PSDAFFFKTVFHF-----FDD-------EDCLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 57 ~~~~~~~~~d~~~---~~~--~~D~v~~~~~l~~-----~~~-------~~~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
..+..++++|..+ .++ ++|+|++.=-... ..+ ......+++++++|+| +|.+++.
T Consensus 12 ~~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~---~G~i~i~ 83 (323)
T 1boo_A 12 TSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKP---DGSFVVD 83 (323)
T ss_dssp CSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEE---EEEEEEE
T ss_pred cCCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcC---CcEEEEE
Confidence 3456778888754 232 5999888421110 110 1234778999999999 7887775
No 423
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=68.55 E-value=16 Score=26.22 Aligned_cols=86 Identities=13% Similarity=0.136 Sum_probs=47.2
Q ss_pred CeEEEeCCcc-cH-HHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEe--------c---CCccc---CCCccEEEe
Q 030291 17 RSMVDVGGGT-GA-FARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIE--------G---DMFQF---IPPSDAFFF 79 (180)
Q Consensus 17 ~~iLdiG~G~-G~-~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~--------~---d~~~~---~~~~D~v~~ 79 (180)
.+|.=||+|. |. ++..|.+. +..++.+|.++ ..+..++. .+.... . +..+. ...+|+|+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 80 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG--GNDVTLIDQWPAHIEAIRKN-GLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIA 80 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHH-CEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhC-CEEEEeCCCeeEecceeecchhhcccCCCCCEEEE
Confidence 3688888876 33 34445444 55789998743 44433221 111110 0 11111 226898887
Q ss_pred ccccccCChHHHHHHHHHHHHhhccCCCCcEEEEE
Q 030291 80 KTVFHFFDDEDCLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
.- +......+++++...+++ +.+++.
T Consensus 81 ~v-----~~~~~~~v~~~l~~~l~~----~~~iv~ 106 (316)
T 2ew2_A 81 LT-----KAQQLDAMFKAIQPMITE----KTYVLC 106 (316)
T ss_dssp CS-----CHHHHHHHHHHHGGGCCT----TCEEEE
T ss_pred Ee-----ccccHHHHHHHHHHhcCC----CCEEEE
Confidence 43 344455778888888888 555443
No 424
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=68.35 E-value=11 Score=27.95 Aligned_cols=87 Identities=10% Similarity=0.099 Sum_probs=50.4
Q ss_pred CeEEEe-CCc-ccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecC---Cccc----C--CCccEEEeccccc
Q 030291 17 RSMVDV-GGG-TGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGD---MFQF----I--PPSDAFFFKTVFH 84 (180)
Q Consensus 17 ~~iLdi-G~G-~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d---~~~~----~--~~~D~v~~~~~l~ 84 (180)
+++|=. |+| .|..+..+++.. ++++++++.++ .++.+++..--..+..+ +.+. . ..+|+++-...
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g-- 242 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE-GFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVT-- 242 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSC--
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCC--
Confidence 556644 333 366666777665 77999999744 55555542211122211 1110 0 25999886433
Q ss_pred cCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 85 FFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 85 ~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
.+ .+..+.+.|++ +|.+++...
T Consensus 243 ---~~----~~~~~~~~l~~---~G~iv~~G~ 264 (349)
T 3pi7_A 243 ---GP----LASAIFNAMPK---RARWIIYGR 264 (349)
T ss_dssp ---HH----HHHHHHHHSCT---TCEEEECCC
T ss_pred ---Ch----hHHHHHhhhcC---CCEEEEEec
Confidence 22 24677899999 899988754
No 425
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=68.32 E-value=19 Score=25.98 Aligned_cols=80 Identities=10% Similarity=0.117 Sum_probs=45.0
Q ss_pred CeEEEeCCcc-c-HHHHHHHHHCCCCeEEEeeCch-hhccCCCCC--CeeEEecCCcccC-CCccEEEeccccccCChHH
Q 030291 17 RSMVDVGGGT-G-AFARIISEAFPGIKCTVLDLPH-AVTDMPQTD--NLKYIEGDMFQFI-PPSDAFFFKTVFHFFDDED 90 (180)
Q Consensus 17 ~~iLdiG~G~-G-~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~--~~~~~~~d~~~~~-~~~D~v~~~~~l~~~~~~~ 90 (180)
.+|+=||+|. | .++..|.+.. ..++.++.+. .++...... ..... .+..+.. ..+|+|+.. ++...
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g--~~V~~~~r~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~D~vila-----vk~~~ 74 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSL--PHTTLIGRHAKTITYYTVPHAPAQDIV-VKGYEDVTNTFDVIIIA-----VKTHQ 74 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHC--TTCEEEESSCEEEEEESSTTSCCEEEE-EEEGGGCCSCEEEEEEC-----SCGGG
T ss_pred cEEEEECCCHHHHHHHHHHHHCC--CeEEEEEeccCcEEEEecCCeecccee-cCchHhcCCCCCEEEEe-----CCccC
Confidence 3577888886 3 4566666664 3567776632 332222211 11221 2222333 579998873 33334
Q ss_pred HHHHHHHHHHhhcc
Q 030291 91 CLKLLKKCREAIAS 104 (180)
Q Consensus 91 ~~~~l~~~~~~L~p 104 (180)
...+++.+...+++
T Consensus 75 ~~~~l~~l~~~l~~ 88 (294)
T 3g17_A 75 LDAVIPHLTYLAHE 88 (294)
T ss_dssp HHHHGGGHHHHEEE
T ss_pred HHHHHHHHHHhhCC
Confidence 45788999999988
No 426
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=67.20 E-value=13 Score=32.56 Aligned_cols=101 Identities=18% Similarity=0.206 Sum_probs=62.5
Q ss_pred CCeEEEeCCcccHHHHHHHHHCCCCeEEEeeCchhhccCCC-CCC-eeEEecCCccc----CCCccEEEeccccccC---
Q 030291 16 LRSMVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQ-TDN-LKYIEGDMFQF----IPPSDAFFFKTVFHFF--- 86 (180)
Q Consensus 16 ~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-~~~-~~~~~~d~~~~----~~~~D~v~~~~~l~~~--- 86 (180)
+..+||+|.|.-. +.|..--+...++.+|..+..+.... ... .+|++.|++.. ...+|.+.|...|..-
T Consensus 828 ~~~~lDLGTGPEc--RiLsliP~~~pvtmvD~RP~ae~~~~w~~~~T~yi~~DYl~~~~~~~~~~d~vtailSLGAA~a~ 905 (1299)
T 3iyl_W 828 LAHLLDLGTGPEC--RILSLIPPTLQVTMSDSRPCAELMASFDPALTAYVQGDYSTAAFWNGIRCDSATAIFTIGAAAAA 905 (1299)
T ss_dssp GCSEEEETCCSSC--SGGGSSCTTSCEEEEESSCCSSCGGGBCTTTEEEEESCSSSGGGGSSCCCSEEEETTTHHHHHHH
T ss_pred CCEEEEcCCCccc--eeeecCCCCCceEEEecCCccccccccccccceeEEeccccceeEecCCCCEEEEeeechhhhhh
Confidence 4789999988832 22222235677999998442222222 455 88999999762 3469999886655422
Q ss_pred ChHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCC
Q 030291 87 DDEDCLKLLKKCREAIASNGERGKVLIIDIVIDE 120 (180)
Q Consensus 87 ~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~ 120 (180)
..-...+.++++.+..+++ |..-++...+.+-
T Consensus 906 a~~tl~~~l~~~l~~~~~~--~v~~l~lQLN~Pl 937 (1299)
T 3iyl_W 906 AGTDLIAFVQQLIPRIVAA--GGTRMWLQLNTPL 937 (1299)
T ss_dssp TTCCHHHHHHHHHHHHHHT--TCSEEEECCCCCS
T ss_pred CCCcHHHHHHHHHHHHHhc--CceEEEEEecCCC
Confidence 1223346677777777773 5566666665543
No 427
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=66.75 E-value=5.4 Score=29.70 Aligned_cols=84 Identities=23% Similarity=0.269 Sum_probs=49.3
Q ss_pred CCeEEEeCCcc-c-HHHHHHHHHCCCCeEEEeeCch--hhccCCCCCCeeEEecCCcccCCCccEEEeccccccCChHHH
Q 030291 16 LRSMVDVGGGT-G-AFARIISEAFPGIKCTVLDLPH--AVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDDEDC 91 (180)
Q Consensus 16 ~~~iLdiG~G~-G-~~~~~l~~~~~~~~~~~~D~~~--~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~~~~ 91 (180)
..+|.=||+|. | .++..+.+. +..+++.|.+. ..+.+.+. ++... +..+.....|+|+. .+++...
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~--G~~V~~~~~~~~~~~~~a~~~-G~~~~--~~~e~~~~aDvVil-----avp~~~~ 85 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDS--GVDVTVGLRSGSATVAKAEAH-GLKVA--DVKTAVAAADVVMI-----LTPDEFQ 85 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHHT-TCEEE--CHHHHHHTCSEEEE-----CSCHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHC--cCEEEEEECChHHHHHHHHHC-CCEEc--cHHHHHhcCCEEEE-----eCCcHHH
Confidence 45688899887 3 344445544 45688888732 23433322 23322 43223446899887 4455555
Q ss_pred HHHHH-HHHHhhccCCCCcEEEE
Q 030291 92 LKLLK-KCREAIASNGERGKVLI 113 (180)
Q Consensus 92 ~~~l~-~~~~~L~p~~~~G~~~~ 113 (180)
..+++ ++...++| |.+++
T Consensus 86 ~~v~~~~i~~~l~~----~~ivi 104 (338)
T 1np3_A 86 GRLYKEEIEPNLKK----GATLA 104 (338)
T ss_dssp HHHHHHHTGGGCCT----TCEEE
T ss_pred HHHHHHHHHhhCCC----CCEEE
Confidence 57787 88888888 55555
No 428
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=66.73 E-value=14 Score=29.27 Aligned_cols=89 Identities=12% Similarity=0.023 Sum_probs=52.3
Q ss_pred ccCCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcccCCCccEEEeccccccCChHH
Q 030291 13 FQGLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDDED 90 (180)
Q Consensus 13 ~~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~~~ 90 (180)
...+++|+=+|+|. |......++.+ +.+++++|.+. ..+.+++. ..++ .++.+.....|+|+..-.-.++-+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~~~~~~A~~~-Ga~~--~~l~e~l~~aDvVi~atgt~~~i~-- 344 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDPINALQAMME-GFDV--VTVEEAIGDADIVVTATGNKDIIM-- 344 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT-TCEE--CCHHHHGGGCSEEEECSSSSCSBC--
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-CCEE--ecHHHHHhCCCEEEECCCCHHHHH--
Confidence 35678899999876 65555555555 67999999844 44444322 2222 233223456899887532222111
Q ss_pred HHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 91 CLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 91 ~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
++..+.+++ ||.++.+.
T Consensus 345 -----~~~l~~mk~---ggilvnvG 361 (494)
T 3ce6_A 345 -----LEHIKAMKD---HAILGNIG 361 (494)
T ss_dssp -----HHHHHHSCT---TCEEEECS
T ss_pred -----HHHHHhcCC---CcEEEEeC
Confidence 245567898 77776654
No 429
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=66.65 E-value=4 Score=31.01 Aligned_cols=34 Identities=18% Similarity=0.178 Sum_probs=26.0
Q ss_pred CCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch
Q 030291 15 GLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH 49 (180)
Q Consensus 15 ~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~ 49 (180)
++.+|+=+|+|. |..+..++..+ +++++.+|.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 578899999887 66666666666 67899999843
No 430
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=66.46 E-value=4.8 Score=30.03 Aligned_cols=64 Identities=13% Similarity=0.180 Sum_probs=43.0
Q ss_pred CeEEEeCCcccHHHHHHHHHCCC-CeEEEeeCch-hhccCCC-CCCeeEEecCCccc----CC--CccEEEec
Q 030291 17 RSMVDVGGGTGAFARIISEAFPG-IKCTVLDLPH-AVTDMPQ-TDNLKYIEGDMFQF----IP--PSDAFFFK 80 (180)
Q Consensus 17 ~~iLdiG~G~G~~~~~l~~~~~~-~~~~~~D~~~-~~~~a~~-~~~~~~~~~d~~~~----~~--~~D~v~~~ 80 (180)
-+++|+-||.|.++..+.+..-. ..+.++|..+ ..+-.+. .+...+.+.|+.+- .+ .+|+++..
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~gg 76 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMS 76 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEEC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEec
Confidence 47999999999999999888422 3467899854 4333322 34455677887542 22 58998864
No 431
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=65.58 E-value=10 Score=27.79 Aligned_cols=91 Identities=15% Similarity=0.091 Sum_probs=54.0
Q ss_pred ccCCC-eEEEeCC--cccHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEe---c--CCccc--CCCccEEEecc
Q 030291 13 FQGLR-SMVDVGG--GTGAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIE---G--DMFQF--IPPSDAFFFKT 81 (180)
Q Consensus 13 ~~~~~-~iLdiG~--G~G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~---~--d~~~~--~~~~D~v~~~~ 81 (180)
++++. +||=+|+ |.|..+..+++.. ++++++++.++ .++.+++..--..+. . +.... ...+|+++-..
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~ 225 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPV 225 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESC
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECC
Confidence 44454 7999996 4477777777765 67899988743 444444311111111 1 11111 12588887643
Q ss_pred ccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 82 VFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
. . ..+....+.+++ +|.+++...
T Consensus 226 g-----~----~~~~~~~~~l~~---~G~iv~~G~ 248 (330)
T 1tt7_A 226 G-----G----KQLASLLSKIQY---GGSVAVSGL 248 (330)
T ss_dssp C-----T----HHHHHHHTTEEE---EEEEEECCC
T ss_pred c-----H----HHHHHHHHhhcC---CCEEEEEec
Confidence 2 2 247788899999 898887654
No 432
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=65.34 E-value=23 Score=24.81 Aligned_cols=67 Identities=12% Similarity=0.242 Sum_probs=42.6
Q ss_pred CCCeEEEeCCcccH---HHHHHHHHCCCCeEEEeeCch-hhccCCC--CCCeeEEecCCccc-------------CCCcc
Q 030291 15 GLRSMVDVGGGTGA---FARIISEAFPGIKCTVLDLPH-AVTDMPQ--TDNLKYIEGDMFQF-------------IPPSD 75 (180)
Q Consensus 15 ~~~~iLdiG~G~G~---~~~~l~~~~~~~~~~~~D~~~-~~~~a~~--~~~~~~~~~d~~~~-------------~~~~D 75 (180)
.++++|=.|++.|. ++..|++. +++++.++.+. .++...+ ..++.++..|+.+. .+..|
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEG--GAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 35678877776653 44445555 77899888743 4333322 35788889998652 13689
Q ss_pred EEEecccc
Q 030291 76 AFFFKTVF 83 (180)
Q Consensus 76 ~v~~~~~l 83 (180)
+++.+...
T Consensus 85 ~lv~nAg~ 92 (255)
T 4eso_A 85 LLHINAGV 92 (255)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 98876543
No 433
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=63.81 E-value=3.5 Score=31.58 Aligned_cols=39 Identities=15% Similarity=0.202 Sum_probs=28.3
Q ss_pred CCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccC
Q 030291 15 GLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDM 54 (180)
Q Consensus 15 ~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a 54 (180)
++.+|+=+|+|. |..+..++..+ +++++++|.+. ..+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCGGGHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHH
Confidence 467899999887 66666666666 67899999843 44444
No 434
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=63.07 E-value=19 Score=28.02 Aligned_cols=80 Identities=14% Similarity=0.068 Sum_probs=46.5
Q ss_pred cCCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcccCCCccEEEeccccccCChHHH
Q 030291 14 QGLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDDEDC 91 (180)
Q Consensus 14 ~~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~~~~ 91 (180)
-.+++|+=+|+|. |......++.+ +++++++|.+. ....+... ... ..++.+.....|+|+....-.++-+
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~-Ga~Viv~D~dp~ra~~A~~~-G~~--v~~Leeal~~ADIVi~atgt~~lI~--- 290 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAM-GSIVYVTEIDPICALQACMD-GFR--LVKLNEVIRQVDIVITCTGNKNVVT--- 290 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT-TCE--ECCHHHHTTTCSEEEECSSCSCSBC---
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCChhhhHHHHHc-CCE--eccHHHHHhcCCEEEECCCCcccCC---
Confidence 4578899999988 65555555555 78999999843 22222211 122 2344334567899888422122212
Q ss_pred HHHHHHHHHhhcc
Q 030291 92 LKLLKKCREAIAS 104 (180)
Q Consensus 92 ~~~l~~~~~~L~p 104 (180)
.+..+.+|+
T Consensus 291 ----~e~l~~MK~ 299 (435)
T 3gvp_A 291 ----REHLDRMKN 299 (435)
T ss_dssp ----HHHHHHSCT
T ss_pred ----HHHHHhcCC
Confidence 245567898
No 435
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=62.74 E-value=4.5 Score=30.64 Aligned_cols=95 Identities=15% Similarity=0.133 Sum_probs=50.2
Q ss_pred CCCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCC--CCCeeEEecC---CcccCCCccEEEeccccccCC
Q 030291 15 GLRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQ--TDNLKYIEGD---MFQFIPPSDAFFFKTVFHFFD 87 (180)
Q Consensus 15 ~~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~--~~~~~~~~~d---~~~~~~~~D~v~~~~~l~~~~ 87 (180)
.+.+|+=+|+|. |......+..+ +++++++|.+. .++.+++ ...+.....+ +.+.....|+|+..-......
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~~ 245 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAK 245 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCCC
Confidence 467899999865 55555555555 67899999844 4443332 1222111111 111223589988733211111
Q ss_pred hHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 88 DEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 88 ~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
.+. -+.++..+.++| ||.++...
T Consensus 246 t~~--li~~~~l~~mk~---g~~iV~va 268 (377)
T 2vhw_A 246 APK--LVSNSLVAHMKP---GAVLVDIA 268 (377)
T ss_dssp CCC--CBCHHHHTTSCT---TCEEEEGG
T ss_pred Ccc--eecHHHHhcCCC---CcEEEEEe
Confidence 111 113456677899 77665543
No 436
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=62.20 E-value=15 Score=26.58 Aligned_cols=86 Identities=19% Similarity=0.155 Sum_probs=47.9
Q ss_pred CCeEEEeCCcc-cH-HHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcccCCCccEEEeccccccCChH-HH
Q 030291 16 LRSMVDVGGGT-GA-FARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDDE-DC 91 (180)
Q Consensus 16 ~~~iLdiG~G~-G~-~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~~-~~ 91 (180)
..+|.=||+|. |. ++..|++. +..+++.|.+. ..+...+.. ......+..+.....|+|+.. ++++ ..
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~g-~~~~~~~~~e~~~~aDvvi~~-----vp~~~~~ 78 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA--GLSTWGADLNPQACANLLAEG-ACGAAASAREFAGVVDALVIL-----VVNAAQV 78 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTT-CSEEESSSTTTTTTCSEEEEC-----CSSHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHcC-CccccCCHHHHHhcCCEEEEE-----CCCHHHH
Confidence 35788888876 33 44445554 56799999844 444443221 222234443344568988873 3332 23
Q ss_pred HHHH---HHHHHhhccCCCCcEEEE
Q 030291 92 LKLL---KKCREAIASNGERGKVLI 113 (180)
Q Consensus 92 ~~~l---~~~~~~L~p~~~~G~~~~ 113 (180)
..++ +.+...+++ |.+++
T Consensus 79 ~~v~~~~~~l~~~l~~----g~ivv 99 (303)
T 3g0o_A 79 RQVLFGEDGVAHLMKP----GSAVM 99 (303)
T ss_dssp HHHHC--CCCGGGSCT----TCEEE
T ss_pred HHHHhChhhHHhhCCC----CCEEE
Confidence 3444 556677887 55554
No 437
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=62.16 E-value=4.2 Score=30.59 Aligned_cols=94 Identities=11% Similarity=0.151 Sum_probs=50.1
Q ss_pred CCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCC--CCCeeEEecC---CcccCCCccEEEeccccccCCh
Q 030291 16 LRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQ--TDNLKYIEGD---MFQFIPPSDAFFFKTVFHFFDD 88 (180)
Q Consensus 16 ~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~--~~~~~~~~~d---~~~~~~~~D~v~~~~~l~~~~~ 88 (180)
+.+|+=+|+|. |..+...+... +++++++|.+. .++.+++ ...+.....+ +.+....+|+|+..-.......
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~ 245 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGL-GAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRA 245 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCC
Confidence 48999999865 55555555555 66899999843 4444432 1222222211 1112236999986543322111
Q ss_pred HHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 89 EDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 89 ~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
+. -+.+...+.+++ +|.++...
T Consensus 246 ~~--li~~~~~~~~~~---g~~ivdv~ 267 (361)
T 1pjc_A 246 PI--LVPASLVEQMRT---GSVIVDVA 267 (361)
T ss_dssp CC--CBCHHHHTTSCT---TCEEEETT
T ss_pred Ce--ecCHHHHhhCCC---CCEEEEEe
Confidence 11 013345567888 77666543
No 438
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=62.05 E-value=18 Score=26.54 Aligned_cols=82 Identities=13% Similarity=0.112 Sum_probs=45.2
Q ss_pred CeEEEeCCcc-cH-HHHHHHHHCCC-CeEEEeeCch--------hhccCCCCCCeeEEec-CCcccCCCccEEEeccccc
Q 030291 17 RSMVDVGGGT-GA-FARIISEAFPG-IKCTVLDLPH--------AVTDMPQTDNLKYIEG-DMFQFIPPSDAFFFKTVFH 84 (180)
Q Consensus 17 ~~iLdiG~G~-G~-~~~~l~~~~~~-~~~~~~D~~~--------~~~~a~~~~~~~~~~~-d~~~~~~~~D~v~~~~~l~ 84 (180)
.+|.=||+|. |. ++..|++. + ..+++.|.+. ..+.+.+. .+ .. +..+.....|+|+..
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~--G~~~V~~~dr~~~~~~~~~~~~~~~~~~-g~---~~~s~~e~~~~aDvVi~a---- 94 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR--NAARLAAYDLRFNDPAASGALRARAAEL-GV---EPLDDVAGIACADVVLSL---- 94 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCSEEEEECGGGGCTTTHHHHHHHHHHT-TC---EEESSGGGGGGCSEEEEC----
T ss_pred CeEEEECccHHHHHHHHHHHHc--CCCeEEEEeCCCccccchHHHHHHHHHC-CC---CCCCHHHHHhcCCEEEEe----
Confidence 4688888775 33 33334444 5 6899999843 22221111 22 23 443334468888773
Q ss_pred cCChHHHHHHHHHHHHhhccCCCCcEEEE
Q 030291 85 FFDDEDCLKLLKKCREAIASNGERGKVLI 113 (180)
Q Consensus 85 ~~~~~~~~~~l~~~~~~L~p~~~~G~~~~ 113 (180)
++++...+.++.+...+++ |.+++
T Consensus 95 -vp~~~~~~~~~~i~~~l~~----~~ivv 118 (317)
T 4ezb_A 95 -VVGAATKAVAASAAPHLSD----EAVFI 118 (317)
T ss_dssp -CCGGGHHHHHHHHGGGCCT----TCEEE
T ss_pred -cCCHHHHHHHHHHHhhcCC----CCEEE
Confidence 3444444556777788887 55554
No 439
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=61.07 E-value=14 Score=27.35 Aligned_cols=91 Identities=10% Similarity=0.059 Sum_probs=50.7
Q ss_pred ccCCCeEEEeCCc--ccHHHHHHHHHCCCCeEEEeeCchhhccCCCCCCeeEEec--CCcc-----cCCCccEEEecccc
Q 030291 13 FQGLRSMVDVGGG--TGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYIEG--DMFQ-----FIPPSDAFFFKTVF 83 (180)
Q Consensus 13 ~~~~~~iLdiG~G--~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~--d~~~-----~~~~~D~v~~~~~l 83 (180)
++++++||=.|++ .|..+..+++.....++++++.++..+.++. .--.++.. |..+ ....+|+|+-...
T Consensus 140 ~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~~~~~~~~~~-ga~~~~~~~~~~~~~~~~~~~~g~Dvv~d~~g- 217 (349)
T 4a27_A 140 LREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKD-SVTHLFDRNADYVQEVKRISAEGVDIVLDCLC- 217 (349)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEECGGGHHHHGG-GSSEEEETTSCHHHHHHHHCTTCEEEEEEECC-
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHc-CCcEEEcCCccHHHHHHHhcCCCceEEEECCC-
Confidence 6788999999973 3677777777655678888875433333331 11112221 1111 1125998886332
Q ss_pred ccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 84 HFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
.+ .+....+.|++ +|.+++...
T Consensus 218 ----~~----~~~~~~~~l~~---~G~~v~~G~ 239 (349)
T 4a27_A 218 ----GD----NTGKGLSLLKP---LGTYILYGS 239 (349)
T ss_dssp ---------------CTTEEE---EEEEEEEC-
T ss_pred ----ch----hHHHHHHHhhc---CCEEEEECC
Confidence 22 24667789999 899988754
No 440
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=60.99 E-value=20 Score=26.23 Aligned_cols=82 Identities=17% Similarity=0.272 Sum_probs=44.3
Q ss_pred cCCCeEEEeCCcc-c-HHHHHHHHHCCCCeEEEeeC-chhhccCCC------CCCeeEE-----ecCCcccCCCccEEEe
Q 030291 14 QGLRSMVDVGGGT-G-AFARIISEAFPGIKCTVLDL-PHAVTDMPQ------TDNLKYI-----EGDMFQFIPPSDAFFF 79 (180)
Q Consensus 14 ~~~~~iLdiG~G~-G-~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------~~~~~~~-----~~d~~~~~~~~D~v~~ 79 (180)
....+|.=||+|. | .++..|.+. +..++.+ . ++.++..++ .....+. ..|. +....+|+|+.
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~--G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~D~vil 92 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARA--GHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDP-SAVQGADLVLF 92 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHT--TCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCG-GGGTTCSEEEE
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHC--CCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCH-HHcCCCCEEEE
Confidence 3567899999987 4 345555555 4467666 5 333333322 1111110 1222 23346899887
Q ss_pred ccccccCChHHHHHHHHHHHHhhcc
Q 030291 80 KTVFHFFDDEDCLKLLKKCREAIAS 104 (180)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~~~~L~p 104 (180)
.- +.....++++.+...+++
T Consensus 93 av-----k~~~~~~~l~~l~~~l~~ 112 (318)
T 3hwr_A 93 CV-----KSTDTQSAALAMKPALAK 112 (318)
T ss_dssp CC-----CGGGHHHHHHHHTTTSCT
T ss_pred Ec-----ccccHHHHHHHHHHhcCC
Confidence 43 333445788999999988
No 441
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=60.89 E-value=27 Score=21.68 Aligned_cols=62 Identities=10% Similarity=0.127 Sum_probs=38.1
Q ss_pred CCeEEEeCCcccHHHHHHHHHC--CCCeEEEeeCch-hhccCCCCCCeeEEecCCccc-------CCCccEEEec
Q 030291 16 LRSMVDVGGGTGAFARIISEAF--PGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQF-------IPPSDAFFFK 80 (180)
Q Consensus 16 ~~~iLdiG~G~G~~~~~l~~~~--~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~-------~~~~D~v~~~ 80 (180)
..+|+=+|+|. ++..+++.+ .+..++++|.++ .++.+++ ..+.++.+|..++ ...+|+++..
T Consensus 6 ~~~v~I~G~G~--iG~~la~~L~~~g~~V~~id~~~~~~~~~~~-~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 6 RYEYIVIGSEA--AGVGLVRELTAAGKKVLAVDKSKEKIELLED-EGFDAVIADPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEECCTTCHHHHHHSCCTTCSEEEEC
T ss_pred CCEEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-CCCcEEECCCCCHHHHHhCCcccCCEEEEe
Confidence 35688888865 443333221 266899999844 5554443 3467788888552 2368888764
No 442
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=60.82 E-value=10 Score=28.49 Aligned_cols=87 Identities=17% Similarity=0.266 Sum_probs=48.2
Q ss_pred CCCeEEEeCCcc-cH-HHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcc---cCCCccEEEeccccccCCh
Q 030291 15 GLRSMVDVGGGT-GA-FARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQ---FIPPSDAFFFKTVFHFFDD 88 (180)
Q Consensus 15 ~~~~iLdiG~G~-G~-~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~---~~~~~D~v~~~~~l~~~~~ 88 (180)
...+|.=||+|. |. ++..|++. +..++++|.+. ..+.+.+. ++.. ..+..+ ..+..|+|+..- ++
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~--G~~V~v~dr~~~~~~~l~~~-g~~~-~~s~~e~~~~a~~~DvVi~~v-----p~ 91 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKG--GHECVVYDLNVNAVQALERE-GIAG-ARSIEEFCAKLVKPRVVWLMV-----PA 91 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT-TCBC-CSSHHHHHHHSCSSCEEEECS-----CG
T ss_pred cCCEEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHC-CCEE-eCCHHHHHhcCCCCCEEEEeC-----CH
Confidence 346788888775 33 34445554 56799999854 44444322 1211 122211 122459888733 33
Q ss_pred HHHHHHHHHHHHhhccCCCCcEEEEE
Q 030291 89 EDCLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 89 ~~~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
.....++..+...+++ |.+++.
T Consensus 92 ~~v~~vl~~l~~~l~~----g~iiId 113 (358)
T 4e21_A 92 AVVDSMLQRMTPLLAA----NDIVID 113 (358)
T ss_dssp GGHHHHHHHHGGGCCT----TCEEEE
T ss_pred HHHHHHHHHHHhhCCC----CCEEEe
Confidence 3444678888888888 555553
No 443
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=60.64 E-value=18 Score=28.67 Aligned_cols=126 Identities=16% Similarity=0.095 Sum_probs=69.5
Q ss_pred CCCeEEEeC-CcccHH--HHHHHHHCCCCeEEEeeCch---hhccCCCCCCeeEEecCCcccC-CCccEEEeccccccCC
Q 030291 15 GLRSMVDVG-GGTGAF--ARIISEAFPGIKCTVLDLPH---AVTDMPQTDNLKYIEGDMFQFI-PPSDAFFFKTVFHFFD 87 (180)
Q Consensus 15 ~~~~iLdiG-~G~G~~--~~~l~~~~~~~~~~~~D~~~---~~~~a~~~~~~~~~~~d~~~~~-~~~D~v~~~~~l~~~~ 87 (180)
..++|.=|| ||+|.. +..|.+. +.++++.|... +.+..+ ...+.+..+.-.+.. ..+|+|+.+-.+.. .
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~--G~~V~~sD~~~~~~~~~~L~-~~gi~~~~G~~~~~~~~~~d~vV~Spgi~~-~ 93 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARAL--GHTVTGSDANIYPPMSTQLE-QAGVTIEEGYLIAHLQPAPDLVVVGNAMKR-G 93 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCCTTHHHHHH-HTTCEEEESCCGGGGCSCCSEEEECTTCCT-T
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhC--CCEEEEECCCCCcHHHHHHH-HCCCEEECCCCHHHcCCCCCEEEECCCcCC-C
Confidence 346788788 555654 3333444 88899999732 222222 235666665432333 46899988766632 2
Q ss_pred hHHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhh-hhhccceeeEeecCCcccCHHHHHHHHHHcCCeE
Q 030291 88 DEDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTE-SKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFTH 163 (180)
Q Consensus 88 ~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 163 (180)
++. +.++++ . |.-++.+.-. +.+ ..........++.+++.+|..-+..+|+++|+..
T Consensus 94 ~p~----l~~a~~---~----gi~v~~~~e~--------l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~G~~~ 151 (524)
T 3hn7_A 94 MDV----IEYMLD---T----GLRYTSGPQF--------LSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYAGIDA 151 (524)
T ss_dssp SHH----HHHHHH---H----TCCEEEHHHH--------HHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHTTCCC
T ss_pred CHH----HHHHHH---C----CCcEEEHHHH--------HHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHcCCCc
Confidence 222 433333 2 4445543210 111 0111223455667788888888889999999864
No 444
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=60.18 E-value=30 Score=25.18 Aligned_cols=79 Identities=8% Similarity=0.195 Sum_probs=43.7
Q ss_pred eEEEeCCcc-c-HHHHHHHHHCCCCeEEEeeC--ch-hhccCCCCC----------CeeEEec-CCcccCCCccEEEecc
Q 030291 18 SMVDVGGGT-G-AFARIISEAFPGIKCTVLDL--PH-AVTDMPQTD----------NLKYIEG-DMFQFIPPSDAFFFKT 81 (180)
Q Consensus 18 ~iLdiG~G~-G-~~~~~l~~~~~~~~~~~~D~--~~-~~~~a~~~~----------~~~~~~~-d~~~~~~~~D~v~~~~ 81 (180)
+|.=||+|. | .++..|.+. +..++.+|. ++ ..+..++.. ++..... +..+.....|+|+..-
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v 79 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN--GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV 79 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH--CCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHhC--CCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcC
Confidence 466788876 4 345556665 457888887 44 444333211 1121110 2212234689988743
Q ss_pred ccccCChHHHHHHHHHHHHhhcc
Q 030291 82 VFHFFDDEDCLKLLKKCREAIAS 104 (180)
Q Consensus 82 ~l~~~~~~~~~~~l~~~~~~L~p 104 (180)
+......+++.+.. +++
T Consensus 80 -----~~~~~~~v~~~i~~-l~~ 96 (335)
T 1txg_A 80 -----STDGVLPVMSRILP-YLK 96 (335)
T ss_dssp -----CGGGHHHHHHHHTT-TCC
T ss_pred -----ChHHHHHHHHHHhc-CCC
Confidence 33344477888888 887
No 445
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=60.04 E-value=14 Score=26.27 Aligned_cols=82 Identities=9% Similarity=0.071 Sum_probs=43.8
Q ss_pred eEEEeCCcc-cH-HHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcccCCCccEEEeccccccCChH-HHHH
Q 030291 18 SMVDVGGGT-GA-FARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDDE-DCLK 93 (180)
Q Consensus 18 ~iLdiG~G~-G~-~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~~-~~~~ 93 (180)
+|.=||+|. |. ++..+.+ +.+++++|.+. ..+...+. ++.... ..+.....|+|+.. ++++ ....
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~---g~~V~~~~~~~~~~~~~~~~-g~~~~~--~~~~~~~~D~vi~~-----v~~~~~~~~ 71 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR---RFPTLVWNRTFEKALRHQEE-FGSEAV--PLERVAEARVIFTC-----LPTTREVYE 71 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT---TSCEEEECSSTHHHHHHHHH-HCCEEC--CGGGGGGCSEEEEC-----CSSHHHHHH
T ss_pred eEEEEcccHHHHHHHHHHhC---CCeEEEEeCCHHHHHHHHHC-CCcccC--HHHHHhCCCEEEEe-----CCChHHHHH
Confidence 466788876 44 3444443 45688888743 33333221 122211 21223468988873 3333 2345
Q ss_pred HHHHHHHhhccCCCCcEEEEE
Q 030291 94 LLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 94 ~l~~~~~~L~p~~~~G~~~~~ 114 (180)
+++.+...+++ |.+++.
T Consensus 72 v~~~l~~~l~~----~~~vv~ 88 (289)
T 2cvz_A 72 VAEALYPYLRE----GTYWVD 88 (289)
T ss_dssp HHHHHTTTCCT----TEEEEE
T ss_pred HHHHHHhhCCC----CCEEEE
Confidence 67777777887 555553
No 446
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=59.04 E-value=6.5 Score=29.61 Aligned_cols=94 Identities=16% Similarity=0.201 Sum_probs=48.7
Q ss_pred CCeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCC--CCCeeEEecCCc---ccCCCccEEEeccccccCCh
Q 030291 16 LRSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQ--TDNLKYIEGDMF---QFIPPSDAFFFKTVFHFFDD 88 (180)
Q Consensus 16 ~~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~--~~~~~~~~~d~~---~~~~~~D~v~~~~~l~~~~~ 88 (180)
+.+|+=+|+|. |......+... +++++++|.+. .++.+++ ...+.....+.. +.....|+|+..........
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~ 244 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGM-GAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKA 244 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC------
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCcccc
Confidence 47899999854 44444445544 67899999843 4443322 122222111111 11235899887544321011
Q ss_pred HHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 89 EDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 89 ~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
+. -+.+...+.+++ +|.++...
T Consensus 245 ~~--li~~~~l~~mk~---gg~iV~v~ 266 (369)
T 2eez_A 245 PK--LVTRDMLSLMKE---GAVIVDVA 266 (369)
T ss_dssp -C--CSCHHHHTTSCT---TCEEEECC
T ss_pred ch--hHHHHHHHhhcC---CCEEEEEe
Confidence 11 124556677888 77766654
No 447
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=57.96 E-value=40 Score=26.41 Aligned_cols=94 Identities=16% Similarity=0.233 Sum_probs=51.6
Q ss_pred CCCeEEEeCCcc-cH-HHHHHHHHCCCCeEEEeeCch-hhccCCCC------C-------------CeeEEecCCcccCC
Q 030291 15 GLRSMVDVGGGT-GA-FARIISEAFPGIKCTVLDLPH-AVTDMPQT------D-------------NLKYIEGDMFQFIP 72 (180)
Q Consensus 15 ~~~~iLdiG~G~-G~-~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~------~-------------~~~~~~~d~~~~~~ 72 (180)
+..+|.=||+|. |. ++..|++. +..++++|.++ .++..++. + ++.+ ..|..+...
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~--G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a~~ 83 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI--GHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAAVA 83 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHHhh
Confidence 456788898885 44 44445555 56799999843 45444331 1 1211 122211223
Q ss_pred CccEEEecccc----ccCCh-HHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 73 PSDAFFFKTVF----HFFDD-EDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 73 ~~D~v~~~~~l----~~~~~-~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
..|+|+..--- +.-+| ....++++.+.+.+++ |.+++..
T Consensus 84 ~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~----~~iVV~~ 127 (478)
T 2y0c_A 84 HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTG----FKVIVDK 127 (478)
T ss_dssp HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCS----CEEEEEC
T ss_pred cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCC----CCEEEEe
Confidence 57887763211 00111 3455778888999998 6666543
No 448
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=57.94 E-value=21 Score=26.95 Aligned_cols=35 Identities=6% Similarity=0.069 Sum_probs=23.3
Q ss_pred CCCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEE
Q 030291 71 IPPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 71 ~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
...+|+|+..- +.....++++++...+++ +.+++.
T Consensus 80 ~~~aD~Vilav-----~~~~~~~v~~~l~~~l~~----~~ivv~ 114 (404)
T 3c7a_A 80 ISGADVVILTV-----PAFAHEGYFQAMAPYVQD----SALIVG 114 (404)
T ss_dssp HTTCSEEEECS-----CGGGHHHHHHHHTTTCCT----TCEEEE
T ss_pred hCCCCEEEEeC-----chHHHHHHHHHHHhhCCC----CcEEEE
Confidence 34689888733 333345788889888888 555554
No 449
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=57.72 E-value=47 Score=23.41 Aligned_cols=65 Identities=20% Similarity=0.268 Sum_probs=45.2
Q ss_pred CCCeEEEeCCcccH---HHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcc---------cCCCccEEEecc
Q 030291 15 GLRSMVDVGGGTGA---FARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQ---------FIPPSDAFFFKT 81 (180)
Q Consensus 15 ~~~~iLdiG~G~G~---~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~---------~~~~~D~v~~~~ 81 (180)
.++++|=-|++.|. .++.|++. ++++...|.+. .++.. ...++.....|+.+ ..++.|+++.+.
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~--Ga~Vv~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNA 86 (242)
T 4b79_A 10 AGQQVLVTGGSSGIGAAIAMQFAEL--GAEVVALGLDADGVHAP-RHPRIRREELDITDSQRLQRLFEALPRLDVLVNNA 86 (242)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTSTTSC-CCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHhhh-hcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECC
Confidence 46778888877764 45556666 78899999854 44333 35678888899865 245799988765
Q ss_pred c
Q 030291 82 V 82 (180)
Q Consensus 82 ~ 82 (180)
.
T Consensus 87 G 87 (242)
T 4b79_A 87 G 87 (242)
T ss_dssp C
T ss_pred C
Confidence 3
No 450
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=57.49 E-value=4.5 Score=29.95 Aligned_cols=79 Identities=15% Similarity=0.180 Sum_probs=44.1
Q ss_pred CeEEEeCCcc-c-HHHHHHHHHCCCCeEEEeeCchhhccCCCCCCeeEE------------ecCCcccCCCccEEEeccc
Q 030291 17 RSMVDVGGGT-G-AFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYI------------EGDMFQFIPPSDAFFFKTV 82 (180)
Q Consensus 17 ~~iLdiG~G~-G-~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~------------~~d~~~~~~~~D~v~~~~~ 82 (180)
.+|.=||+|. | .++..|.+. +..++.+|.++..+..++ ..+... ..|. +....+|+|+..
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~-~~~~~~D~Vila-- 77 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA--GEAINVLARGATLQALQT-AGLRLTEDGATHTLPVRATHDA-AALGEQDVVIVA-- 77 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT--TCCEEEECCHHHHHHHHH-TCEEEEETTEEEEECCEEESCH-HHHCCCSEEEEC--
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEEEChHHHHHHHH-CCCEEecCCCeEEEeeeEECCH-HHcCCCCEEEEe--
Confidence 4688899886 4 344555555 456888887433332221 111111 1122 123468998873
Q ss_pred cccCChHHHHHHHHHHHHhhcc
Q 030291 83 FHFFDDEDCLKLLKKCREAIAS 104 (180)
Q Consensus 83 l~~~~~~~~~~~l~~~~~~L~p 104 (180)
++......+++.+...+++
T Consensus 78 ---vk~~~~~~~~~~l~~~l~~ 96 (335)
T 3ghy_A 78 ---VKAPALESVAAGIAPLIGP 96 (335)
T ss_dssp ---CCHHHHHHHHGGGSSSCCT
T ss_pred ---CCchhHHHHHHHHHhhCCC
Confidence 3444455777778778877
No 451
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=56.81 E-value=67 Score=24.93 Aligned_cols=126 Identities=15% Similarity=0.170 Sum_probs=67.9
Q ss_pred cCCCeEEEeCC-cccHH--HHHHHHHCCCCeEEEeeCch--hhccCCCCCCeeEEecCCcccCCCccEEEeccccccCCh
Q 030291 14 QGLRSMVDVGG-GTGAF--ARIISEAFPGIKCTVLDLPH--AVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDD 88 (180)
Q Consensus 14 ~~~~~iLdiG~-G~G~~--~~~l~~~~~~~~~~~~D~~~--~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~ 88 (180)
+..++|+=||- |+|.. ++.|.+. +..+++.|... ..+..+ ...+.+..+........+|+|+.+-.+.. .+
T Consensus 16 ~~~~~i~viG~G~sG~s~~A~~l~~~--G~~V~~~D~~~~~~~~~l~-~~gi~~~~g~~~~~~~~a~~vv~s~~i~~-~~ 91 (475)
T 1p3d_A 16 RRVQQIHFIGIGGAGMSGIAEILLNE--GYQISGSDIADGVVTQRLA-QAGAKIYIGHAEEHIEGASVVVVSSAIKD-DN 91 (475)
T ss_dssp TTCCEEEEETTTSTTHHHHHHHHHHH--TCEEEEEESCCSHHHHHHH-HTTCEEEESCCGGGGTTCSEEEECTTSCT-TC
T ss_pred ccCCEEEEEeecHHHHHHHHHHHHhC--CCEEEEECCCCCHHHHHHH-hCCCEEECCCCHHHcCCCCEEEECCCCCC-CC
Confidence 34567888884 45664 4455555 77899999832 332222 23455555433234446898888754421 11
Q ss_pred HHHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCe
Q 030291 89 EDCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFT 162 (180)
Q Consensus 89 ~~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 162 (180)
+. +.+.++ . |.-++.... .+............++.+++..|..-+..+|+++|++
T Consensus 92 ~~----~~~a~~---~----~i~vl~~~~--------~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~ 146 (475)
T 1p3d_A 92 PE----LVTSKQ---K----RIPVIQRAQ--------MLAEIMRFRHGIAVAGTHGKTTTTAMISMIYTQAKLD 146 (475)
T ss_dssp HH----HHHHHH---T----TCCEEEHHH--------HHHHHHHTSEEEEEESSSCHHHHHHHHHHHHHHTTCC
T ss_pred HH----HHHHHH---c----CCcEEEHHH--------HHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhCCCC
Confidence 21 332222 2 322332110 0111111122344566778888888899999999986
No 452
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=56.79 E-value=1.5 Score=30.95 Aligned_cols=89 Identities=12% Similarity=0.182 Sum_probs=45.5
Q ss_pred CeEEEeCCcc-c-HHHHHHHHHC--CCCeEEEeeCch-hhccCCCCCCeeEEecCCcccCCCccEEEeccccccCChHHH
Q 030291 17 RSMVDVGGGT-G-AFARIISEAF--PGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDDEDC 91 (180)
Q Consensus 17 ~~iLdiG~G~-G-~~~~~l~~~~--~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~~~~ 91 (180)
.+|.=||+|. | .++..+.+.. +...+++.|.++ ..+...+..++.. ..|..+.....|+|+..- ++...
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~-~~~~~e~~~~aDvVilav-----~~~~~ 76 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTT-TTDNNEVAKNADILILSI-----KPDLY 76 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEE-CSCHHHHHHHCSEEEECS-----CTTTH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEE-eCChHHHHHhCCEEEEEe-----CHHHH
Confidence 3577788876 3 3444555542 112788999843 4444332112221 122212233588888743 33344
Q ss_pred HHHHHHHHHhhccCCCCcEEEEEE
Q 030291 92 LKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 92 ~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
.++++++...+++ |.++++.
T Consensus 77 ~~v~~~l~~~l~~----~~~vvs~ 96 (247)
T 3gt0_A 77 ASIINEIKEIIKN----DAIIVTI 96 (247)
T ss_dssp HHHC---CCSSCT----TCEEEEC
T ss_pred HHHHHHHHhhcCC----CCEEEEe
Confidence 4677788778887 6666643
No 453
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=56.46 E-value=34 Score=25.80 Aligned_cols=93 Identities=11% Similarity=0.149 Sum_probs=54.3
Q ss_pred CCCeEEEeCCcccHHHHHHHHHCCCCeEEEeeC--ch-hhcc-CC--C--CCCeeEEecCCcccCCCccEEEeccccccC
Q 030291 15 GLRSMVDVGGGTGAFARIISEAFPGIKCTVLDL--PH-AVTD-MP--Q--TDNLKYIEGDMFQFIPPSDAFFFKTVFHFF 86 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~~~~~~~~~D~--~~-~~~~-a~--~--~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~ 86 (180)
...+||.|+.+.|.++..+... .. ....|. +. .+.. .+ + ..++++....- +....+|+|+.... -.
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~--~~-~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~lp-k~- 111 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH--KP-YSIGDSYISELATRENLRLNGIDESSVKFLDSTA-DYPQQPGVVLIKVP-KT- 111 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG--CC-EEEESCHHHHHHHHHHHHHTTCCGGGSEEEETTS-CCCSSCSEEEEECC-SC-
T ss_pred CCCCEEEECCCCCHHHHhhccC--Cc-eEEEhHHHHHHHHHHHHHHcCCCccceEeccccc-ccccCCCEEEEEcC-CC-
Confidence 4568999999999999888654 22 222352 22 1111 11 1 22355543322 23446999887322 11
Q ss_pred ChHHHHHHHHHHHHhhccCCCCcEEEEEEee
Q 030291 87 DDEDCLKLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 87 ~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
-......|.++...|++ |+.+++....
T Consensus 112 -~~~l~~~L~~l~~~l~~---~~~i~~~g~~ 138 (375)
T 4dcm_A 112 -LALLEQQLRALRKVVTS---DTRIIAGAKA 138 (375)
T ss_dssp -HHHHHHHHHHHHTTCCT---TSEEEEEEEG
T ss_pred -HHHHHHHHHHHHhhCCC---CCEEEEEecc
Confidence 22344678999999999 8888776653
No 454
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=56.35 E-value=34 Score=26.60 Aligned_cols=65 Identities=22% Similarity=0.159 Sum_probs=39.8
Q ss_pred CCCeEEEeCCcccHHHH-HHHHHCCCCeEEEeeCc--hhhccCCCCCCeeEEecCCcc-cCCCccEEEec
Q 030291 15 GLRSMVDVGGGTGAFAR-IISEAFPGIKCTVLDLP--HAVTDMPQTDNLKYIEGDMFQ-FIPPSDAFFFK 80 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~-~l~~~~~~~~~~~~D~~--~~~~~a~~~~~~~~~~~d~~~-~~~~~D~v~~~ 80 (180)
.+.+||=+|+|.-...+ .++... ++.++.+|.. +.+....+..++++....+.. .+..+|+|+..
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~-ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~a 79 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEA-GARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAA 79 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHT-TBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-cCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEc
Confidence 36789999998743322 233332 7889999862 222222224568888777743 34568888874
No 455
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=55.97 E-value=29 Score=20.45 Aligned_cols=63 Identities=17% Similarity=0.128 Sum_probs=37.5
Q ss_pred CCeEEEeCCcccHHHHHHHH---HCCCCeEEEeeCch-hhccCCCCCCeeEEecCCccc------CCCccEEEecc
Q 030291 16 LRSMVDVGGGTGAFARIISE---AFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQF------IPPSDAFFFKT 81 (180)
Q Consensus 16 ~~~iLdiG~G~G~~~~~l~~---~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~------~~~~D~v~~~~ 81 (180)
..+|+=+|+ |..+..+++ .....+++++|.+. ..+... ..++.+...|..+. ...+|+|+...
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~ 77 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDEAGLAKALGGFDAVISAA 77 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 357888888 444443332 23226789999843 444333 34566777777541 34689988755
No 456
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=55.78 E-value=16 Score=27.45 Aligned_cols=33 Identities=39% Similarity=0.518 Sum_probs=26.1
Q ss_pred CCeEEEeCCcccHHHHH--HHHHCCCCeEEEeeCc
Q 030291 16 LRSMVDVGGGTGAFARI--ISEAFPGIKCTVLDLP 48 (180)
Q Consensus 16 ~~~iLdiG~G~G~~~~~--l~~~~~~~~~~~~D~~ 48 (180)
+++|+=||+|.+.++.+ |++..++.+++.+|..
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCC
Confidence 57899999999865544 6677778899999963
No 457
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=55.68 E-value=33 Score=26.72 Aligned_cols=82 Identities=11% Similarity=0.183 Sum_probs=51.8
Q ss_pred CCeEEEeCCcccHHHHHHHHHC--CCCeEEEeeCch-hhccCCCCCCeeEEecCCccc-------CCCccEEEecccccc
Q 030291 16 LRSMVDVGGGTGAFARIISEAF--PGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQF-------IPPSDAFFFKTVFHF 85 (180)
Q Consensus 16 ~~~iLdiG~G~G~~~~~l~~~~--~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~-------~~~~D~v~~~~~l~~ 85 (180)
..+|+=+||| ..+..+++.. .+..++.+|..+ .++.+...-.+..+++|..++ ....|++++.-
T Consensus 3 ~M~iiI~G~G--~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t---- 76 (461)
T 4g65_A 3 AMKIIILGAG--QVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVT---- 76 (461)
T ss_dssp CEEEEEECCS--HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECC----
T ss_pred cCEEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEc----
Confidence 4456666664 5666666654 366799999844 666665444678889998652 34699888622
Q ss_pred CChHHHHHHHHHHHHhhcc
Q 030291 86 FDDEDCLKLLKKCREAIAS 104 (180)
Q Consensus 86 ~~~~~~~~~l~~~~~~L~p 104 (180)
++++..-+...+.+.+.+
T Consensus 77 -~~De~Nl~~~~~Ak~~~~ 94 (461)
T 4g65_A 77 -NTDETNMAACQVAFTLFN 94 (461)
T ss_dssp -SCHHHHHHHHHHHHHHHC
T ss_pred -CChHHHHHHHHHHHHhcC
Confidence 233333445666677755
No 458
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=55.63 E-value=22 Score=25.71 Aligned_cols=67 Identities=19% Similarity=0.288 Sum_probs=39.0
Q ss_pred CeEEEeC-Ccc-c-HHHHHHHHHCCCCeEEEeeCchhhccCCCCCCeeEEecCCcccCCCccEEEeccccccCChHHHHH
Q 030291 17 RSMVDVG-GGT-G-AFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDDEDCLK 93 (180)
Q Consensus 17 ~~iLdiG-~G~-G-~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~~~~~~ 93 (180)
.+|.=|| +|. | .++..+.+. +..++++|.+... +..+.....|+|+.. ++......
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~--G~~V~~~~~~~~~--------------~~~~~~~~aDvVila-----vp~~~~~~ 80 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS--GYPISILDREDWA--------------VAESILANADVVIVS-----VPINLTLE 80 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTCGG--------------GHHHHHTTCSEEEEC-----SCGGGHHH
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC--CCeEEEEECCccc--------------CHHHHhcCCCEEEEe-----CCHHHHHH
Confidence 4788888 776 3 344444444 4568888853310 121223467887773 34444557
Q ss_pred HHHHHHHhhcc
Q 030291 94 LLKKCREAIAS 104 (180)
Q Consensus 94 ~l~~~~~~L~p 104 (180)
+++++...+++
T Consensus 81 vl~~l~~~l~~ 91 (298)
T 2pv7_A 81 TIERLKPYLTE 91 (298)
T ss_dssp HHHHHGGGCCT
T ss_pred HHHHHHhhcCC
Confidence 78888777877
No 459
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=55.16 E-value=36 Score=24.91 Aligned_cols=86 Identities=8% Similarity=0.051 Sum_probs=53.0
Q ss_pred CCeEEEeCCcccHHHHHHHHHC--CCCeEEEeeCch-hhccCCCCCCeeEEecCCccc-------CCCccEEEecccccc
Q 030291 16 LRSMVDVGGGTGAFARIISEAF--PGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQF-------IPPSDAFFFKTVFHF 85 (180)
Q Consensus 16 ~~~iLdiG~G~G~~~~~l~~~~--~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~-------~~~~D~v~~~~~l~~ 85 (180)
..+++=+|+ |..+..+++.. .+. ++.+|.++ ..+ .+ ..++.++.+|..++ ...+|.+++..
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~-~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~---- 185 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VL-RSGANFVHGDPTRVSDLEKANVRGARAVIVDL---- 185 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH-HTTCEEEESCTTSHHHHHHTCSTTEEEEEECC----
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH-hCCcEEEEeCCCCHHHHHhcChhhccEEEEcC----
Confidence 346777776 66666666553 255 89999844 555 43 35688899998652 33688888743
Q ss_pred CChHHHHHHHHHHHHhhccCCCCcEEEEE
Q 030291 86 FDDEDCLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 86 ~~~~~~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
+++...-......+.+.| ...++..
T Consensus 186 -~~d~~n~~~~~~ar~~~~---~~~iiar 210 (336)
T 1lnq_A 186 -ESDSETIHCILGIRKIDE---SVRIIAE 210 (336)
T ss_dssp -SSHHHHHHHHHHHHTTCT---TSEEEEE
T ss_pred -CccHHHHHHHHHHHHHCC---CCeEEEE
Confidence 333433445566667777 5565553
No 460
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=54.42 E-value=52 Score=22.92 Aligned_cols=98 Identities=14% Similarity=0.153 Sum_probs=56.2
Q ss_pred CCCeEEEeCCc--c--cH-HHHHHHHHCCCCeEEEeeCch-hhccCC----C--CCCeeEEecCCcccC-----------
Q 030291 15 GLRSMVDVGGG--T--GA-FARIISEAFPGIKCTVLDLPH-AVTDMP----Q--TDNLKYIEGDMFQFI----------- 71 (180)
Q Consensus 15 ~~~~iLdiG~G--~--G~-~~~~l~~~~~~~~~~~~D~~~-~~~~a~----~--~~~~~~~~~d~~~~~----------- 71 (180)
.++++|=.|++ . |. ++..|++. +.+++.++.++ ..+... + ..++.++..|+.+..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 35677878765 3 32 45556665 67788887633 222111 1 237889999996521
Q ss_pred --CCccEEEecccccc----------CChHHHH-----------HHHHHHHHhhccCCCCcEEEEEEee
Q 030291 72 --PPSDAFFFKTVFHF----------FDDEDCL-----------KLLKKCREAIASNGERGKVLIIDIV 117 (180)
Q Consensus 72 --~~~D~v~~~~~l~~----------~~~~~~~-----------~~l~~~~~~L~p~~~~G~~~~~~~~ 117 (180)
+..|+++.+..+.. ....... .+++.+...+++ +|.++.....
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~ 149 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE---GGSIVTLTYL 149 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECG
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CceEEEEecc
Confidence 36898887654332 2222222 134455566666 6888876643
No 461
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=54.22 E-value=36 Score=24.00 Aligned_cols=85 Identities=12% Similarity=0.159 Sum_probs=45.4
Q ss_pred eEEEeCCcc-cH-HHHHHHHHCCCCeEEEeeCch-hhccCCC-C--CC---eeEEecCCcccCCCccEEEeccccccCCh
Q 030291 18 SMVDVGGGT-GA-FARIISEAFPGIKCTVLDLPH-AVTDMPQ-T--DN---LKYIEGDMFQFIPPSDAFFFKTVFHFFDD 88 (180)
Q Consensus 18 ~iLdiG~G~-G~-~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-~--~~---~~~~~~d~~~~~~~~D~v~~~~~l~~~~~ 88 (180)
+|.=||+|. |. ++..|.+. +..++.+|.++ .++.... . .. ..+...+ .+....+|+|+..-- .
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~v~-----~ 73 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ--GHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAND-PDFLATSDLLLVTLK-----A 73 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESC-HHHHHTCSEEEECSC-----G
T ss_pred eEEEECcCHHHHHHHHHHHhC--CCCEEEEEcCccceeeEEEEcCCCceeeeeeeecC-ccccCCCCEEEEEec-----H
Confidence 466788875 33 44445554 55788888743 3332221 1 11 1111111 122336899887433 3
Q ss_pred HHHHHHHHHHHHhhccCCCCcEEEE
Q 030291 89 EDCLKLLKKCREAIASNGERGKVLI 113 (180)
Q Consensus 89 ~~~~~~l~~~~~~L~p~~~~G~~~~ 113 (180)
....++++.+...+++ +..++.
T Consensus 74 ~~~~~v~~~l~~~l~~---~~~vv~ 95 (291)
T 1ks9_A 74 WQVSDAVKSLASTLPV---TTPILL 95 (291)
T ss_dssp GGHHHHHHHHHTTSCT---TSCEEE
T ss_pred HhHHHHHHHHHhhCCC---CCEEEE
Confidence 3345778889998988 444443
No 462
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=53.79 E-value=41 Score=26.31 Aligned_cols=93 Identities=20% Similarity=0.323 Sum_probs=52.8
Q ss_pred CeEEEeCCcc-cH-HHHHHHHHCCCCeEEEeeCch-hhccCCCC------C------------CeeEEecCCcccCCCcc
Q 030291 17 RSMVDVGGGT-GA-FARIISEAFPGIKCTVLDLPH-AVTDMPQT------D------------NLKYIEGDMFQFIPPSD 75 (180)
Q Consensus 17 ~~iLdiG~G~-G~-~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~------~------------~~~~~~~d~~~~~~~~D 75 (180)
.+|.=||+|. |. ++..|++..++.+++++|.++ .++..++. . ++.+ ..|..+.....|
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~-t~~~~~~~~~aD 88 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF-SSDIPKAIAEAD 88 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHHHCS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHhhcCC
Confidence 4788899887 43 555667775567899999844 44444321 1 1111 122212223578
Q ss_pred EEEecc--ccc-------cCCh-HHHHHHHHHHHHhhccCCCCcEEEEE
Q 030291 76 AFFFKT--VFH-------FFDD-EDCLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 76 ~v~~~~--~l~-------~~~~-~~~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
+|+..- -.+ +-+| .....+++.+.+.+++ |.+++.
T Consensus 89 vvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~----g~iVV~ 133 (481)
T 2o3j_A 89 LIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGG----PKIVVE 133 (481)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCS----CEEEEE
T ss_pred EEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCC----CCEEEE
Confidence 887742 111 0112 1244678888899998 666664
No 463
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=53.76 E-value=22 Score=25.81 Aligned_cols=86 Identities=13% Similarity=0.179 Sum_probs=45.6
Q ss_pred CeEEEeCCcc-c-HHHHHHHHHCCCCeEEEeeCchhhccCCCC--------CCeeEEecCCc---ccCCCccEEEecccc
Q 030291 17 RSMVDVGGGT-G-AFARIISEAFPGIKCTVLDLPHAVTDMPQT--------DNLKYIEGDMF---QFIPPSDAFFFKTVF 83 (180)
Q Consensus 17 ~~iLdiG~G~-G-~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~--------~~~~~~~~d~~---~~~~~~D~v~~~~~l 83 (180)
.+|.=||+|. | .++..|.+. +..++.++.++ .+..++. +..++...... +....+|+|+..---
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~-~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~D~vilavk~ 79 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS--GEDVHFLLRRD-YEAIAGNGLKVFSINGDFTLPHVKGYRAPEEIGPMDLVLVGLKT 79 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT--SCCEEEECSTT-HHHHHHTCEEEEETTCCEEESCCCEESCHHHHCCCSEEEECCCG
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCeEEEEEcCc-HHHHHhCCCEEEcCCCeEEEeeceeecCHHHcCCCCEEEEecCC
Confidence 3577888887 3 345555555 45688888754 2222211 11221111110 123468998874332
Q ss_pred ccCChHHHHHHHHHHHHhhccCCCCcEEEE
Q 030291 84 HFFDDEDCLKLLKKCREAIASNGERGKVLI 113 (180)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~ 113 (180)
+ ....+++.+...+++ +..++.
T Consensus 80 ~-----~~~~~l~~l~~~l~~---~~~iv~ 101 (312)
T 3hn2_A 80 F-----ANSRYEELIRPLVEE---GTQILT 101 (312)
T ss_dssp G-----GGGGHHHHHGGGCCT---TCEEEE
T ss_pred C-----CcHHHHHHHHhhcCC---CCEEEE
Confidence 2 223668889899988 444443
No 464
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=53.22 E-value=45 Score=22.93 Aligned_cols=68 Identities=13% Similarity=0.171 Sum_probs=42.5
Q ss_pred cCCCeEEEeCCcccH---HHHHHHHHCCCCeEEEeeCch-hhccCCC--CCCeeEEecCCccc---------CCCccEEE
Q 030291 14 QGLRSMVDVGGGTGA---FARIISEAFPGIKCTVLDLPH-AVTDMPQ--TDNLKYIEGDMFQF---------IPPSDAFF 78 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~---~~~~l~~~~~~~~~~~~D~~~-~~~~a~~--~~~~~~~~~d~~~~---------~~~~D~v~ 78 (180)
..+++||=.|++.|. ++..|++. +.+++.++.+. .++...+ ..++.+...|+.+. .+..|+++
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li 89 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKL--GSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILV 89 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence 456778877766552 34445555 67888888743 3333322 45788888888541 23689988
Q ss_pred ecccc
Q 030291 79 FKTVF 83 (180)
Q Consensus 79 ~~~~l 83 (180)
.+...
T Consensus 90 ~~Ag~ 94 (249)
T 3f9i_A 90 CNAGI 94 (249)
T ss_dssp ECCC-
T ss_pred ECCCC
Confidence 86654
No 465
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=52.91 E-value=32 Score=26.43 Aligned_cols=92 Identities=20% Similarity=0.126 Sum_probs=47.7
Q ss_pred eEEEeCCcc-cH-HHHHHHHHCCCCeEEEeeCch-hhccCCC-------------------CCCeeEEecCCcccCCCcc
Q 030291 18 SMVDVGGGT-GA-FARIISEAFPGIKCTVLDLPH-AVTDMPQ-------------------TDNLKYIEGDMFQFIPPSD 75 (180)
Q Consensus 18 ~iLdiG~G~-G~-~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-------------------~~~~~~~~~d~~~~~~~~D 75 (180)
+|.=||+|. |. ++..|++. +.+++++|.++ .++..++ ..++.+ ..|..+.....|
T Consensus 2 kI~VIG~G~vG~~~A~~la~~--G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~-t~~~~~~~~~aD 78 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG-TTDFKKAVLDSD 78 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHHHTCS
T ss_pred EEEEECCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE-eCCHHHHhccCC
Confidence 466678776 43 44445554 56799999843 4444332 112322 223312234688
Q ss_pred EEEecccc-c---cCChH-HHHHHHHHHHHhhccCCCC--cEEEEEE
Q 030291 76 AFFFKTVF-H---FFDDE-DCLKLLKKCREAIASNGER--GKVLIID 115 (180)
Q Consensus 76 ~v~~~~~l-~---~~~~~-~~~~~l~~~~~~L~p~~~~--G~~~~~~ 115 (180)
+|+..--- . ..+|. ...++++.+.+.+++ . |.+++..
T Consensus 79 vviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~---~~~~~iVV~~ 122 (436)
T 1mv8_A 79 VSFICVGTPSKKNGDLDLGYIETVCREIGFAIRE---KSERHTVVVR 122 (436)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTT---CCSCCEEEEC
T ss_pred EEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcc---cCCCcEEEEe
Confidence 88764311 1 11111 134677888888875 3 6666643
No 466
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=52.59 E-value=48 Score=22.86 Aligned_cols=67 Identities=15% Similarity=0.190 Sum_probs=42.3
Q ss_pred CCCeEEEeCCcccH---HHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCccc-------------CC
Q 030291 15 GLRSMVDVGGGTGA---FARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQF-------------IP 72 (180)
Q Consensus 15 ~~~~iLdiG~G~G~---~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~~-------------~~ 72 (180)
.++++|=.|++.|. ++..|++. +.+++.+|.+. .++...+ ..++.++..|+.+. .+
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALARE--GAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 35677777766542 44455555 67898888743 3333221 46788889999652 13
Q ss_pred CccEEEecccc
Q 030291 73 PSDAFFFKTVF 83 (180)
Q Consensus 73 ~~D~v~~~~~l 83 (180)
..|+++.+..+
T Consensus 86 ~id~li~~Ag~ 96 (253)
T 3qiv_A 86 GIDYLVNNAAI 96 (253)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68999887654
No 467
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=52.49 E-value=19 Score=26.93 Aligned_cols=87 Identities=14% Similarity=0.226 Sum_probs=49.8
Q ss_pred CCeEEEeCCcc-cH-HHHHHHHHCCCCeEEEeeCc-hhhccCCC-C------------CCeeEEecCCcccCCCccEEEe
Q 030291 16 LRSMVDVGGGT-GA-FARIISEAFPGIKCTVLDLP-HAVTDMPQ-T------------DNLKYIEGDMFQFIPPSDAFFF 79 (180)
Q Consensus 16 ~~~iLdiG~G~-G~-~~~~l~~~~~~~~~~~~D~~-~~~~~a~~-~------------~~~~~~~~d~~~~~~~~D~v~~ 79 (180)
..+|.=||+|. |. ++..|++. +..++..|.+ +.++..++ . .++.+ ..|..+.....|+|+.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~--G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~-t~d~~ea~~~aDvVil 105 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK--GQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKA-YCDLKASLEGVTDILI 105 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT--TCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE-ESCHHHHHTTCCEEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEE-ECCHHHHHhcCCEEEE
Confidence 35788899876 33 34444444 4568888874 33333221 1 11222 2233223346898887
Q ss_pred ccccccCChHHHHHHHHHHHHhhccCCCCcEEEEE
Q 030291 80 KTVFHFFDDEDCLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 80 ~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
. ++.....++++++...+++ +.+++.
T Consensus 106 a-----Vp~~~~~~vl~~i~~~l~~----~~ivvs 131 (356)
T 3k96_A 106 V-----VPSFAFHEVITRMKPLIDA----KTRIAW 131 (356)
T ss_dssp C-----CCHHHHHHHHHHHGGGCCT----TCEEEE
T ss_pred C-----CCHHHHHHHHHHHHHhcCC----CCEEEE
Confidence 3 4555666889999999988 555543
No 468
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=52.20 E-value=62 Score=23.19 Aligned_cols=97 Identities=13% Similarity=0.107 Sum_probs=58.3
Q ss_pred CCCeEEEeCCcccH---HHHHHHHHCCCCeEEEeeCch-hhccCCC--CCCeeEEecCCccc-------------CCCcc
Q 030291 15 GLRSMVDVGGGTGA---FARIISEAFPGIKCTVLDLPH-AVTDMPQ--TDNLKYIEGDMFQF-------------IPPSD 75 (180)
Q Consensus 15 ~~~~iLdiG~G~G~---~~~~l~~~~~~~~~~~~D~~~-~~~~a~~--~~~~~~~~~d~~~~-------------~~~~D 75 (180)
.++++|=-|++.|. .+..|++. ++++...|.++ .++...+ ..+...+..|+.+. .+..|
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~--Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 105 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAE--GARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID 105 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 35667777777663 45556666 78899999844 4444332 56677888898652 24689
Q ss_pred EEEeccccc------cCChHHHHHH-----------HHHHHHhhccCCCCcEEEEEEe
Q 030291 76 AFFFKTVFH------FFDDEDCLKL-----------LKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 76 ~v~~~~~l~------~~~~~~~~~~-----------l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
+++.+.... .++++++.+. .+.+...++. +|.++....
T Consensus 106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~---~G~IInisS 160 (273)
T 4fgs_A 106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR---GSSVVLTGS 160 (273)
T ss_dssp EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECC
T ss_pred EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCeEEEEee
Confidence 888765432 2333333322 3444566777 677776544
No 469
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=52.05 E-value=33 Score=24.39 Aligned_cols=69 Identities=16% Similarity=0.159 Sum_probs=42.2
Q ss_pred cCCCeEEEeCCcccH---HHHHHHHHCCCCeEEEeeCch-hhccC----CC--CCCeeEEecCCccc-------------
Q 030291 14 QGLRSMVDVGGGTGA---FARIISEAFPGIKCTVLDLPH-AVTDM----PQ--TDNLKYIEGDMFQF------------- 70 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~---~~~~l~~~~~~~~~~~~D~~~-~~~~a----~~--~~~~~~~~~d~~~~------------- 70 (180)
..++++|=.|++.|. +++.|++. +.+++.++.+. ..+.+ ++ ..++.++..|+.+.
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~ 87 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSN--GIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT 87 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence 345677877766552 34445554 67898888743 22221 12 35789999998654
Q ss_pred -CCCccEEEeccccc
Q 030291 71 -IPPSDAFFFKTVFH 84 (180)
Q Consensus 71 -~~~~D~v~~~~~l~ 84 (180)
.+..|+++.+..+.
T Consensus 88 ~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 88 HFGKLDILVNNAGVA 102 (311)
T ss_dssp HHSSCCEEEECCCCC
T ss_pred hCCCCCEEEECCccc
Confidence 13689999877653
No 470
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=51.87 E-value=83 Score=24.54 Aligned_cols=127 Identities=15% Similarity=0.104 Sum_probs=67.0
Q ss_pred cCCCeEEEeCC-cccHH-HHHHHHHCCCCeEEEeeCch--hhccCCCCCCeeEEecCCcccCCCccEEEeccccccCChH
Q 030291 14 QGLRSMVDVGG-GTGAF-ARIISEAFPGIKCTVLDLPH--AVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDDE 89 (180)
Q Consensus 14 ~~~~~iLdiG~-G~G~~-~~~l~~~~~~~~~~~~D~~~--~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~~ 89 (180)
+..++|+=||- |+|.. ...++... +..+++.|... .....+ ...+.+..+........+|+|+.+-.+.. .++
T Consensus 17 ~~~~~v~viGiG~sG~s~~A~~l~~~-G~~V~~~D~~~~~~~~~l~-~~gi~~~~g~~~~~~~~a~~vv~s~~i~~-~~p 93 (491)
T 2f00_A 17 RRVRHIHFVGIGGAGMGGIAEVLANE-GYQISGSDLAPNPVTQQLM-NLGATIYFNHRPENVRDASVVVVSSAISA-DNP 93 (491)
T ss_dssp TTCCEEEEETTTSTTHHHHHHHHHHT-TCEEEEECSSCCHHHHHHH-HTTCEEESSCCGGGGTTCSEEEECTTCCT-TCH
T ss_pred ccCCEEEEEEcCHHHHHHHHHHHHhC-CCeEEEECCCCCHHHHHHH-HCCCEEECCCCHHHcCCCCEEEECCCCCC-CCH
Confidence 44567888884 55664 33344333 78899999832 332222 23455554433233446898888755421 122
Q ss_pred HHHHHHHHHHHhhccCCCCcEEEEEEeeeCCCCCchhhhhhhhccceeeEeecCCcccCHHHHHHHHHHcCCe
Q 030291 90 DCLKLLKKCREAIASNGERGKVLIIDIVIDEKEDDRELTESKLLFDIFMNFNVGGKERTEQEWGSLFVNAGFT 162 (180)
Q Consensus 90 ~~~~~l~~~~~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 162 (180)
. +.+.++ . |.-++.... .+............++.+++..|..-+..+|+++|++
T Consensus 94 ~----~~~a~~---~----~ipvl~~~~--------~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~ 147 (491)
T 2f00_A 94 E----IVAAHE---A----RIPVIRRAE--------MLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGLD 147 (491)
T ss_dssp H----HHHHHH---T----TCCEEEHHH--------HHHHHHTTSEEEEEESSSCHHHHHHHHHHHHHHTTCC
T ss_pred H----HHHHHH---c----CCcEEEHHH--------HHHHHHcCCCEEEEECCCCHHHHHHHHHHHHHhCCCC
Confidence 1 332222 2 322332110 0111111122344556778888888899999999986
No 471
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=51.15 E-value=61 Score=22.76 Aligned_cols=95 Identities=14% Similarity=0.072 Sum_probs=49.5
Q ss_pred eEEEeCCcccHHHHHHHHH---CCCCeEEEeeCch-hhccCCCCCCeeEEecCCccc------CCCccEEEeccccccCC
Q 030291 18 SMVDVGGGTGAFARIISEA---FPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQF------IPPSDAFFFKTVFHFFD 87 (180)
Q Consensus 18 ~iLdiG~G~G~~~~~l~~~---~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~------~~~~D~v~~~~~l~~~~ 87 (180)
+||=.| |+|.++..+++. .++.++++++-+. ..... ...+++++.+|+.++ ....|.|+.........
T Consensus 2 ~ilVtG-atG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~ 79 (289)
T 3e48_A 2 NIMLTG-ATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-WRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPS 79 (289)
T ss_dssp CEEEET-TTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-GBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSH
T ss_pred EEEEEc-CCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-hhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccc
Confidence 355454 455555554443 2366788887633 22211 245789999999652 34689988765543221
Q ss_pred hHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 88 DEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 88 ~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
. .......++.++++..+ -+.++....
T Consensus 80 ~-~~~~~~~~l~~aa~~~g-v~~iv~~Ss 106 (289)
T 3e48_A 80 F-KRIPEVENLVYAAKQSG-VAHIIFIGY 106 (289)
T ss_dssp H-HHHHHHHHHHHHHHHTT-CCEEEEEEE
T ss_pred h-hhHHHHHHHHHHHHHcC-CCEEEEEcc
Confidence 1 11133444555554411 135555544
No 472
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=50.90 E-value=52 Score=22.92 Aligned_cols=65 Identities=12% Similarity=0.230 Sum_probs=40.8
Q ss_pred CCeEEEeCCcccH---HHHHHHHHCCCCeEEEeeCch-hhccCC----C-CCCeeEEecCCccc-------------CCC
Q 030291 16 LRSMVDVGGGTGA---FARIISEAFPGIKCTVLDLPH-AVTDMP----Q-TDNLKYIEGDMFQF-------------IPP 73 (180)
Q Consensus 16 ~~~iLdiG~G~G~---~~~~l~~~~~~~~~~~~D~~~-~~~~a~----~-~~~~~~~~~d~~~~-------------~~~ 73 (180)
++++|=.|++.|. ++..|++. +++++.+|.+. .++... + ..++.++..|+.+. .+.
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKE--GARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR 83 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5667777766542 34445555 77888888743 333222 2 45788899999652 136
Q ss_pred ccEEEeccc
Q 030291 74 SDAFFFKTV 82 (180)
Q Consensus 74 ~D~v~~~~~ 82 (180)
.|+++.+..
T Consensus 84 id~lv~nAg 92 (257)
T 3imf_A 84 IDILINNAA 92 (257)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899887654
No 473
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=50.36 E-value=21 Score=25.60 Aligned_cols=39 Identities=3% Similarity=0.116 Sum_probs=26.4
Q ss_pred cCCCccEEEeccccc-cCChHHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 70 FIPPSDAFFFKTVFH-FFDDEDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 70 ~~~~~D~v~~~~~l~-~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
.+..||+||....-. .+.+ ..++.+.+..+. ||.+++..
T Consensus 47 ~L~~yDvIIl~d~~~~~l~~----~~~~~L~~yV~~---GGgLi~~g 86 (259)
T 3rht_A 47 LLAKQDLVILSDYPAERMTA----QAIDQLVTMVKA---GCGLVMLG 86 (259)
T ss_dssp HHHTCSEEEEESCCGGGBCH----HHHHHHHHHHHT---TCEEEEEC
T ss_pred HHhcCCEEEEcCCccccCCH----HHHHHHHHHHHh---CCeEEEec
Confidence 455799999865432 2333 347778888887 88888874
No 474
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=49.97 E-value=30 Score=25.25 Aligned_cols=85 Identities=11% Similarity=0.179 Sum_probs=47.0
Q ss_pred CeEEEeCCcc-c-HHHHHHHHHCCCCeEEEeeCchhhccCCC---------CCCeeEE----ecCCcccCC-CccEEEec
Q 030291 17 RSMVDVGGGT-G-AFARIISEAFPGIKCTVLDLPHAVTDMPQ---------TDNLKYI----EGDMFQFIP-PSDAFFFK 80 (180)
Q Consensus 17 ~~iLdiG~G~-G-~~~~~l~~~~~~~~~~~~D~~~~~~~a~~---------~~~~~~~----~~d~~~~~~-~~D~v~~~ 80 (180)
.+|+=||+|. | .++..|.+. +..++.++.++. +..++ .+.+++. ..|. +... .+|+|+..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~~-~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~-~~~~~~~DlVila 78 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT--GHCVSVVSRSDY-ETVKAKGIRIRSATLGDYTFRPAAVVRSA-AELETKPDCTLLC 78 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT--TCEEEEECSTTH-HHHHHHCEEEEETTTCCEEECCSCEESCG-GGCSSCCSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCChH-HHHHhCCcEEeecCCCcEEEeeeeeECCH-HHcCCCCCEEEEe
Confidence 4678888887 3 345555554 567888887442 22111 1223221 1222 2233 69998885
Q ss_pred cccccCChHHHHHHHHHHHHhhccCCCCcEEEE
Q 030291 81 TVFHFFDDEDCLKLLKKCREAIASNGERGKVLI 113 (180)
Q Consensus 81 ~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~ 113 (180)
---+.+. .+++.+...+++ +..++.
T Consensus 79 vK~~~~~-----~~l~~l~~~l~~---~t~Iv~ 103 (320)
T 3i83_A 79 IKVVEGA-----DRVGLLRDAVAP---DTGIVL 103 (320)
T ss_dssp CCCCTTC-----CHHHHHTTSCCT---TCEEEE
T ss_pred cCCCChH-----HHHHHHHhhcCC---CCEEEE
Confidence 4433332 558888888888 554444
No 475
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=49.77 E-value=65 Score=22.66 Aligned_cols=67 Identities=16% Similarity=0.183 Sum_probs=41.4
Q ss_pred CCCeEEEeCCcccH---HHHHHHHHCCCCeEEEeeCch-------------hhccCC-----CCCCeeEEecCCccc---
Q 030291 15 GLRSMVDVGGGTGA---FARIISEAFPGIKCTVLDLPH-------------AVTDMP-----QTDNLKYIEGDMFQF--- 70 (180)
Q Consensus 15 ~~~~iLdiG~G~G~---~~~~l~~~~~~~~~~~~D~~~-------------~~~~a~-----~~~~~~~~~~d~~~~--- 70 (180)
.++++|=.|++.|. ++..|++. +++++.+|.+. .++... ...++.++..|+.+.
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEE--GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence 35678877776653 44455555 77888887641 111111 146788899999652
Q ss_pred ----------CCCccEEEecccc
Q 030291 71 ----------IPPSDAFFFKTVF 83 (180)
Q Consensus 71 ----------~~~~D~v~~~~~l 83 (180)
.+..|+++.+...
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~ 109 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGI 109 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCc
Confidence 1368999887654
No 476
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=49.73 E-value=7.1 Score=25.08 Aligned_cols=37 Identities=11% Similarity=0.092 Sum_probs=25.1
Q ss_pred CCccEEEeccccc--cCChHHHHHHHHHHHHhhccCCCCcEEEE
Q 030291 72 PPSDAFFFKTVFH--FFDDEDCLKLLKKCREAIASNGERGKVLI 113 (180)
Q Consensus 72 ~~~D~v~~~~~l~--~~~~~~~~~~l~~~~~~L~p~~~~G~~~~ 113 (180)
..||.|+...--. +..-+ +.++..+.++|+| ||.+..
T Consensus 58 stYD~V~~lt~~~~~~~~l~--r~li~~l~~aLkp---gG~L~g 96 (136)
T 2km1_A 58 AKYETVHYLTPEAQTDIKFP--KKLISVLADSLKP---NGSLIG 96 (136)
T ss_dssp SSCCSEEEECCCSSCSCCCC--HHHHHHHHTTCCT---TCCEEC
T ss_pred ccccEEEEecCCccchhhcC--HHHHHHHHHHhCC---CCEEEe
Confidence 3699988733221 11112 3789999999999 888876
No 477
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=49.66 E-value=66 Score=22.76 Aligned_cols=67 Identities=12% Similarity=0.104 Sum_probs=42.9
Q ss_pred CCCeEEEeCCcccH---HHHHHHHHCCCCeEEEeeCch-hhccCC-----CCCCeeEEecCCccc-------------CC
Q 030291 15 GLRSMVDVGGGTGA---FARIISEAFPGIKCTVLDLPH-AVTDMP-----QTDNLKYIEGDMFQF-------------IP 72 (180)
Q Consensus 15 ~~~~iLdiG~G~G~---~~~~l~~~~~~~~~~~~D~~~-~~~~a~-----~~~~~~~~~~d~~~~-------------~~ 72 (180)
.++++|=-|++.|. .++.|++. ++++...|.++ .++... ...++.++..|+.++ .+
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAA--GARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 35666666766653 44555565 78899999843 433332 146788888998652 34
Q ss_pred CccEEEecccc
Q 030291 73 PSDAFFFKTVF 83 (180)
Q Consensus 73 ~~D~v~~~~~l 83 (180)
..|+++.+..+
T Consensus 86 ~iDiLVNNAG~ 96 (255)
T 4g81_D 86 HVDILINNAGI 96 (255)
T ss_dssp CCCEEEECCCC
T ss_pred CCcEEEECCCC
Confidence 68998886543
No 478
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=49.35 E-value=56 Score=21.83 Aligned_cols=94 Identities=11% Similarity=0.043 Sum_probs=53.1
Q ss_pred eEEEeCCcccHHHHHHHHHC--CCCeEEEeeCch-hhccCCCCCCeeEEecCCccc----CCCccEEEeccccccC--Ch
Q 030291 18 SMVDVGGGTGAFARIISEAF--PGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQF----IPPSDAFFFKTVFHFF--DD 88 (180)
Q Consensus 18 ~iLdiG~G~G~~~~~l~~~~--~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~----~~~~D~v~~~~~l~~~--~~ 88 (180)
+||=.|+ +|.+...+++.+ .+.++++++-+. ...... ..+++++.+|+.+. ....|+|+.+....+- ..
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~ 79 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-GATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGRG 79 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-CTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSCT
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEeccccccccc-CCCceEEecccccccHhhcccCCEEEECCccCCCcchh
Confidence 4565654 454444443331 266788888743 332221 35788999999653 3468998886654311 11
Q ss_pred HHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 89 EDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 89 ~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
.........+.++++.. ++.+++..
T Consensus 80 ~~n~~~~~~l~~a~~~~--~~~~v~~S 104 (224)
T 3h2s_A 80 YLHLDFATHLVSLLRNS--DTLAVFIL 104 (224)
T ss_dssp HHHHHHHHHHHHTCTTC--CCEEEEEC
T ss_pred hHHHHHHHHHHHHHHHc--CCcEEEEe
Confidence 22234567777777763 45565553
No 479
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=49.17 E-value=68 Score=22.71 Aligned_cols=66 Identities=12% Similarity=0.168 Sum_probs=43.5
Q ss_pred CCCeEEEeCCcccH---HHHHHHHHCCCCeEEEeeCch-hhccCCC-----CCCeeEEecCCccc-------------CC
Q 030291 15 GLRSMVDVGGGTGA---FARIISEAFPGIKCTVLDLPH-AVTDMPQ-----TDNLKYIEGDMFQF-------------IP 72 (180)
Q Consensus 15 ~~~~iLdiG~G~G~---~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----~~~~~~~~~d~~~~-------------~~ 72 (180)
.++++|=-|++.|. .++.|++. ++++...|.++ .++...+ ..++.+++.|+.++ .+
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~--Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALN--DSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 45667777776663 45555555 78899999843 4433322 56788899999652 24
Q ss_pred CccEEEeccc
Q 030291 73 PSDAFFFKTV 82 (180)
Q Consensus 73 ~~D~v~~~~~ 82 (180)
..|+++.+..
T Consensus 84 ~iDiLVNNAG 93 (254)
T 4fn4_A 84 RIDVLCNNAG 93 (254)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCc
Confidence 6999887654
No 480
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=48.70 E-value=57 Score=25.28 Aligned_cols=91 Identities=18% Similarity=0.244 Sum_probs=47.2
Q ss_pred CeEEEeCCcc-cHHHHHHHHHCCCCeEEEeeCch-hhccCCCC-----------------CCeeEEecCCcccCCCccEE
Q 030291 17 RSMVDVGGGT-GAFARIISEAFPGIKCTVLDLPH-AVTDMPQT-----------------DNLKYIEGDMFQFIPPSDAF 77 (180)
Q Consensus 17 ~~iLdiG~G~-G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~-----------------~~~~~~~~d~~~~~~~~D~v 77 (180)
.+|.=||+|. |......+.. +..++++|.++ .++..++. .++++ ..|..+.....|+|
T Consensus 37 mkIaVIGlG~mG~~lA~~La~--G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~-ttd~~ea~~~aDvV 113 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ--NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRA-TTDKHDAYRNADYV 113 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT--TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE-ESCHHHHHTTCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHc--CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEE-EcCHHHHHhCCCEE
Confidence 4677787765 3322222223 67899999944 44444321 12222 22332234468888
Q ss_pred Eecccccc-----CCh-HHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 78 FFKTVFHF-----FDD-EDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 78 ~~~~~l~~-----~~~-~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
+..-.-.. .+| .....+++.+.+ ++| |.+++..
T Consensus 114 iiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~----g~iVV~~ 152 (432)
T 3pid_A 114 IIATPTDYDPKTNYFNTSTVEAVIRDVTE-INP----NAVMIIK 152 (432)
T ss_dssp EECCCCEEETTTTEEECHHHHHHHHHHHH-HCT----TSEEEEC
T ss_pred EEeCCCccccccccccHHHHHHHHHHHHh-cCC----CcEEEEe
Confidence 76422110 011 134466788888 888 5555543
No 481
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=48.65 E-value=64 Score=22.87 Aligned_cols=67 Identities=15% Similarity=0.191 Sum_probs=41.5
Q ss_pred CCCeEEEeCCcccH---HHHHHHHHCCCCeEEEeeCch-hhccCCC--CCCeeEEecCCccc---------CCCccEEEe
Q 030291 15 GLRSMVDVGGGTGA---FARIISEAFPGIKCTVLDLPH-AVTDMPQ--TDNLKYIEGDMFQF---------IPPSDAFFF 79 (180)
Q Consensus 15 ~~~~iLdiG~G~G~---~~~~l~~~~~~~~~~~~D~~~-~~~~a~~--~~~~~~~~~d~~~~---------~~~~D~v~~ 79 (180)
.++++|=.|++.|. ++..|++. +.+++.++.+. ..+.+.+ ..++.++..|+.+. .+..|+++.
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~ 92 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARR--GATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLIN 92 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence 35667777766542 34444444 67898888743 3333322 45788999998652 235799887
Q ss_pred cccc
Q 030291 80 KTVF 83 (180)
Q Consensus 80 ~~~l 83 (180)
+..+
T Consensus 93 nAg~ 96 (291)
T 3rd5_A 93 NAGI 96 (291)
T ss_dssp CCCC
T ss_pred CCcC
Confidence 6554
No 482
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=48.40 E-value=34 Score=24.77 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=26.5
Q ss_pred cCCCccEEEeccccccCChHHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 70 FIPPSDAFFFKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 70 ~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
.+..||+||....-..+++ ...+.+.+.++. ||.++..-.
T Consensus 55 ~L~~~D~vV~~~~~~~l~~----~~~~~l~~yV~~---Ggglv~~H~ 94 (281)
T 4e5v_A 55 DFSPYQLVVLDYNGDSWPE----ETNRRFLEYVQN---GGGVVIYHA 94 (281)
T ss_dssp CCTTCSEEEECCCSSCCCH----HHHHHHHHHHHT---TCEEEEEGG
T ss_pred hhhcCCEEEEeCCCCcCCH----HHHHHHHHHHHc---CCCEEEEec
Confidence 4567999997554333333 347777788887 777777543
No 483
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=48.09 E-value=48 Score=24.17 Aligned_cols=86 Identities=16% Similarity=0.215 Sum_probs=48.4
Q ss_pred CCeEEEeCCcc-cH-HHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcccCCCccEEEeccccccCCh-HHH
Q 030291 16 LRSMVDVGGGT-GA-FARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDD-EDC 91 (180)
Q Consensus 16 ~~~iLdiG~G~-G~-~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~-~~~ 91 (180)
..+|.=||+|. |. ++..+++. +..+++.|.+. ..+...+. ++.. ..+..+.....|+|+.. +++ ...
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~l~~~-g~~~-~~~~~e~~~~aDvVi~~-----vp~~~~~ 101 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEA--GYALQVWNRTPARAASLAAL-GATI-HEQARAAARDADIVVSM-----LENGAVV 101 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT-TCEE-ESSHHHHHTTCSEEEEC-----CSSHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHC-CCEe-eCCHHHHHhcCCEEEEE-----CCCHHHH
Confidence 34788899886 44 44445554 66799999854 44444332 2322 23332234468888873 343 233
Q ss_pred HHHHH--HHHHhhccCCCCcEEEEE
Q 030291 92 LKLLK--KCREAIASNGERGKVLII 114 (180)
Q Consensus 92 ~~~l~--~~~~~L~p~~~~G~~~~~ 114 (180)
..++. .+...+++ |.+++.
T Consensus 102 ~~v~~~~~~~~~l~~----~~~vi~ 122 (320)
T 4dll_A 102 QDVLFAQGVAAAMKP----GSLFLD 122 (320)
T ss_dssp HHHHTTTCHHHHCCT----TCEEEE
T ss_pred HHHHcchhHHhhCCC----CCEEEe
Confidence 35555 66777887 555543
No 484
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=47.78 E-value=49 Score=24.18 Aligned_cols=89 Identities=12% Similarity=0.002 Sum_probs=45.2
Q ss_pred CCCeEEEeCCcc-cHHHHHHHH-HCCCCeEE-EeeCch-hhccCCCCCCeeEEecCCcc--cCCCccEEEeccccccCCh
Q 030291 15 GLRSMVDVGGGT-GAFARIISE-AFPGIKCT-VLDLPH-AVTDMPQTDNLKYIEGDMFQ--FIPPSDAFFFKTVFHFFDD 88 (180)
Q Consensus 15 ~~~~iLdiG~G~-G~~~~~l~~-~~~~~~~~-~~D~~~-~~~~a~~~~~~~~~~~d~~~--~~~~~D~v~~~~~l~~~~~ 88 (180)
...+|.=||||. |......+. ..++.+++ ..|.+. ..+...+.-++.....|+.+ ..+..|+|+.... +
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp-----~ 81 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAP-----T 81 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSC-----G
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCC-----h
Confidence 346788999986 443333333 55677754 457743 33332221122112344433 2246898887432 2
Q ss_pred HHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 89 EDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 89 ~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
. .-.+.+..+|+. |+-++++
T Consensus 82 ~---~h~~~~~~al~~----G~~v~~e 101 (346)
T 3cea_A 82 P---FHPEMTIYAMNA----GLNVFCE 101 (346)
T ss_dssp G---GHHHHHHHHHHT----TCEEEEC
T ss_pred H---hHHHHHHHHHHC----CCEEEEc
Confidence 1 113445567777 6655554
No 485
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=47.33 E-value=68 Score=22.22 Aligned_cols=66 Identities=15% Similarity=0.205 Sum_probs=37.9
Q ss_pred CCeEEEeCCcccH---HHHHHHHHCCCCeEEEeeCch-hhccCCC--CCCeeEEecCCccc-------------CCCccE
Q 030291 16 LRSMVDVGGGTGA---FARIISEAFPGIKCTVLDLPH-AVTDMPQ--TDNLKYIEGDMFQF-------------IPPSDA 76 (180)
Q Consensus 16 ~~~iLdiG~G~G~---~~~~l~~~~~~~~~~~~D~~~-~~~~a~~--~~~~~~~~~d~~~~-------------~~~~D~ 76 (180)
++++|=.|++.|. ++..|++. +.+++.++.+. ..+...+ ..++.++..|+.+. .+..|+
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 84 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQE--GATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG 84 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5667777776552 44455555 77898888743 3333322 45788888998652 136899
Q ss_pred EEecccc
Q 030291 77 FFFKTVF 83 (180)
Q Consensus 77 v~~~~~l 83 (180)
++.+...
T Consensus 85 lv~nAg~ 91 (257)
T 3tpc_A 85 LVNCAGT 91 (257)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 8886554
No 486
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=47.05 E-value=53 Score=25.80 Aligned_cols=88 Identities=17% Similarity=0.245 Sum_probs=52.6
Q ss_pred CeEEEeCCcc-c-HHHHHHHHHCCCCeEEEeeCch-hhccCCC-----------C------------CCeeEEecCCccc
Q 030291 17 RSMVDVGGGT-G-AFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----------T------------DNLKYIEGDMFQF 70 (180)
Q Consensus 17 ~~iLdiG~G~-G-~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----------~------------~~~~~~~~d~~~~ 70 (180)
.+|-=||+|. | .++..+++. +..++..|.++ .++.+.+ . .++++ ..|. +.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-~~~~-~~ 81 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH--GHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIP-VTDI-HA 81 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEE-ECCG-GG
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeE-eCCH-HH
Confidence 4577788876 3 345555555 56799999854 5544321 1 13333 2333 34
Q ss_pred CCCccEEEeccccccCChH-HHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 71 IPPSDAFFFKTVFHFFDDE-DCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 71 ~~~~D~v~~~~~l~~~~~~-~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
....|+|+..-. ++. ....+++++.+.+++ +.++.++.
T Consensus 82 ~~~aDlVIeAVp----e~~~vk~~v~~~l~~~~~~----~~Ilasnt 120 (483)
T 3mog_A 82 LAAADLVIEAAS----ERLEVKKALFAQLAEVCPP----QTLLTTNT 120 (483)
T ss_dssp GGGCSEEEECCC----CCHHHHHHHHHHHHHHSCT----TCEEEECC
T ss_pred hcCCCEEEEcCC----CcHHHHHHHHHHHHHhhcc----CcEEEecC
Confidence 556899887421 222 345789999999998 66666543
No 487
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=46.95 E-value=98 Score=24.00 Aligned_cols=95 Identities=17% Similarity=0.235 Sum_probs=51.5
Q ss_pred CCCeEEEeCCcc-cH-HHHHHHHHCCCCeEEEeeCch-hhccCCCC-------------------CCeeEEecCCcccCC
Q 030291 15 GLRSMVDVGGGT-GA-FARIISEAFPGIKCTVLDLPH-AVTDMPQT-------------------DNLKYIEGDMFQFIP 72 (180)
Q Consensus 15 ~~~~iLdiG~G~-G~-~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~-------------------~~~~~~~~d~~~~~~ 72 (180)
+..+|-=||.|. |. ++..|++. +..++++|.++ .++..++. .++++ ..|..+...
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~--G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea~~ 83 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDF--GHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEGVK 83 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHHT
T ss_pred CceEEEEEcCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHHHh
Confidence 455777787775 44 33344444 66899999843 44444331 12222 233322334
Q ss_pred CccEEEecc--cc---ccCCh-HHHHHHHHHHHHhhccCCCCcEEEEEEe
Q 030291 73 PSDAFFFKT--VF---HFFDD-EDCLKLLKKCREAIASNGERGKVLIIDI 116 (180)
Q Consensus 73 ~~D~v~~~~--~l---~~~~~-~~~~~~l~~~~~~L~p~~~~G~~~~~~~ 116 (180)
..|+|+..- -. +.-+| ....++++.+.+.|++ |.+++...
T Consensus 84 ~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~----g~iVV~~S 129 (446)
T 4a7p_A 84 DADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTK----PSVIVTKS 129 (446)
T ss_dssp TCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCS----CCEEEECS
T ss_pred cCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCC----CCEEEEeC
Confidence 688887641 11 11111 1345678888889988 55555443
No 488
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=46.90 E-value=40 Score=24.06 Aligned_cols=87 Identities=16% Similarity=0.166 Sum_probs=46.6
Q ss_pred CCeEEEeCCcc-cH-HHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcccCCCccEEEeccccccCChHHHH
Q 030291 16 LRSMVDVGGGT-GA-FARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDDEDCL 92 (180)
Q Consensus 16 ~~~iLdiG~G~-G~-~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~~~~~ 92 (180)
..+|.=||+|. |. ++..+.+. +.+++++|.+. ..+...+. .+.. ..+..+.....|+|+..-. .+....
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~-g~~~-~~~~~~~~~~~D~vi~~vp----~~~~~~ 75 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKE--GVTVYAFDLMEANVAAVVAQ-GAQA-CENNQKVAAASDIIFTSLP----NAGIVE 75 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHTT-TCEE-CSSHHHHHHHCSEEEECCS----SHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHC-CCee-cCCHHHHHhCCCEEEEECC----CHHHHH
Confidence 35788899886 43 44445544 56788999843 44433322 2322 2222122235888887331 122233
Q ss_pred HHHH---HHHHhhccCCCCcEEEEE
Q 030291 93 KLLK---KCREAIASNGERGKVLII 114 (180)
Q Consensus 93 ~~l~---~~~~~L~p~~~~G~~~~~ 114 (180)
.++. .+...+++ |.+++.
T Consensus 76 ~v~~~~~~l~~~l~~----~~~vv~ 96 (301)
T 3cky_A 76 TVMNGPGGVLSACKA----GTVIVD 96 (301)
T ss_dssp HHHHSTTCHHHHSCT----TCEEEE
T ss_pred HHHcCcchHhhcCCC----CCEEEE
Confidence 5554 67778887 555554
No 489
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=45.72 E-value=20 Score=25.88 Aligned_cols=89 Identities=13% Similarity=0.164 Sum_probs=47.3
Q ss_pred CeEEEeCCcc-c-HHHHHHHHHC--C-C-CeEEEeeCchhhccCCCCCCeeEEe-------c-----CCcccCCCccEEE
Q 030291 17 RSMVDVGGGT-G-AFARIISEAF--P-G-IKCTVLDLPHAVTDMPQTDNLKYIE-------G-----DMFQFIPPSDAFF 78 (180)
Q Consensus 17 ~~iLdiG~G~-G-~~~~~l~~~~--~-~-~~~~~~D~~~~~~~a~~~~~~~~~~-------~-----d~~~~~~~~D~v~ 78 (180)
.+|.=||+|. | .++..|.+.. + + ..++.+|.++..+..++...+.... . +..+....+|+|+
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi 88 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIARGAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYIL 88 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECCHHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEcHHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEEE
Confidence 4788899886 4 3455555540 1 3 4688888733333322101222211 0 1111234689888
Q ss_pred eccccccCChHHHHHHHHHHHHhhccCCCCcEEEEE
Q 030291 79 FKTVFHFFDDEDCLKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 79 ~~~~l~~~~~~~~~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
..---+ ...++++.+...+++ +.+++.
T Consensus 89 l~vk~~-----~~~~v~~~i~~~l~~----~~~iv~ 115 (317)
T 2qyt_A 89 FCTKDY-----DMERGVAEIRPMIGQ----NTKILP 115 (317)
T ss_dssp ECCSSS-----CHHHHHHHHGGGEEE----EEEEEE
T ss_pred EecCcc-----cHHHHHHHHHhhcCC----CCEEEE
Confidence 743322 234678888888888 555554
No 490
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=45.49 E-value=84 Score=22.72 Aligned_cols=66 Identities=18% Similarity=0.221 Sum_probs=39.0
Q ss_pred CCCeEEEeCCcccHHHHHHHHHC--CCCeEEEeeCchhhccCCCCCCeeEEecCCccc------CCCccEEEeccccccC
Q 030291 15 GLRSMVDVGGGTGAFARIISEAF--PGIKCTVLDLPHAVTDMPQTDNLKYIEGDMFQF------IPPSDAFFFKTVFHFF 86 (180)
Q Consensus 15 ~~~~iLdiG~G~G~~~~~l~~~~--~~~~~~~~D~~~~~~~a~~~~~~~~~~~d~~~~------~~~~D~v~~~~~l~~~ 86 (180)
...+||=.|+ +|.++..+++.+ .+.++++++.+.. ..++.++.+|+.+. ....|+|+........
T Consensus 18 ~~~~vlVtGa-tG~iG~~l~~~L~~~G~~V~~~~r~~~------~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~ 90 (347)
T 4id9_A 18 GSHMILVTGS-AGRVGRAVVAALRTQGRTVRGFDLRPS------GTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMSW 90 (347)
T ss_dssp ---CEEEETT-TSHHHHHHHHHHHHTTCCEEEEESSCC------SSCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCCS
T ss_pred CCCEEEEECC-CChHHHHHHHHHHhCCCEEEEEeCCCC------CCCccEEecCcCCHHHHHHHHhCCCEEEECCcccCc
Confidence 4567777764 555555444332 2567888886431 15678889998652 2368999876655444
Q ss_pred C
Q 030291 87 D 87 (180)
Q Consensus 87 ~ 87 (180)
.
T Consensus 91 ~ 91 (347)
T 4id9_A 91 A 91 (347)
T ss_dssp S
T ss_pred c
Confidence 3
No 491
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=44.71 E-value=68 Score=22.32 Aligned_cols=66 Identities=12% Similarity=0.089 Sum_probs=40.4
Q ss_pred CCeEEEeCCcccH---HHHHHHHHCCCCeEEEeeCch-hhccCC-----CCCCeeEEecCCccc-------------CCC
Q 030291 16 LRSMVDVGGGTGA---FARIISEAFPGIKCTVLDLPH-AVTDMP-----QTDNLKYIEGDMFQF-------------IPP 73 (180)
Q Consensus 16 ~~~iLdiG~G~G~---~~~~l~~~~~~~~~~~~D~~~-~~~~a~-----~~~~~~~~~~d~~~~-------------~~~ 73 (180)
++++|=.|++.|. ++..|++. +.+++.++.+. .++... ...++.++..|+.+. .+.
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 106 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSL--GARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR 106 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 4667777765542 33344444 77888888743 333222 146788889998652 135
Q ss_pred ccEEEecccc
Q 030291 74 SDAFFFKTVF 83 (180)
Q Consensus 74 ~D~v~~~~~l 83 (180)
.|+++.+...
T Consensus 107 id~lv~~Ag~ 116 (262)
T 3rkr_A 107 CDVLVNNAGV 116 (262)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCc
Confidence 8998886654
No 492
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=44.48 E-value=78 Score=24.56 Aligned_cols=38 Identities=24% Similarity=0.511 Sum_probs=25.6
Q ss_pred CeEEEeCCcc-cH-HHHHHHHHCCCCeEEEeeCch-hhccC
Q 030291 17 RSMVDVGGGT-GA-FARIISEAFPGIKCTVLDLPH-AVTDM 54 (180)
Q Consensus 17 ~~iLdiG~G~-G~-~~~~l~~~~~~~~~~~~D~~~-~~~~a 54 (180)
.+|.=||+|. |. ++..|++..++.+++++|.++ .++..
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l 46 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAW 46 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHH
Confidence 4788889886 43 555566665567899999843 44443
No 493
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=44.16 E-value=84 Score=22.36 Aligned_cols=95 Identities=9% Similarity=0.165 Sum_probs=54.4
Q ss_pred CCeEEEeCCcccH---HHHHHHHHCCCCeEEEeeCch--hhccCC-----CCCCeeEEecCCccc-------------CC
Q 030291 16 LRSMVDVGGGTGA---FARIISEAFPGIKCTVLDLPH--AVTDMP-----QTDNLKYIEGDMFQF-------------IP 72 (180)
Q Consensus 16 ~~~iLdiG~G~G~---~~~~l~~~~~~~~~~~~D~~~--~~~~a~-----~~~~~~~~~~d~~~~-------------~~ 72 (180)
++++|=.|++.|. ++..|++. +++++.++.+. ..+... ...++.++..|+.+. .+
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 124 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKE--GANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG 124 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4678878776653 44445555 67788887632 222211 146788899999652 13
Q ss_pred CccEEEecccccc-------CChHHHH-----------HHHHHHHHhhccCCCCcEEEEEE
Q 030291 73 PSDAFFFKTVFHF-------FDDEDCL-----------KLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 73 ~~D~v~~~~~l~~-------~~~~~~~-----------~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
..|+++.+..... ...+++. .+++.+...++. +|.++...
T Consensus 125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~iv~is 182 (291)
T 3ijr_A 125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ---GDVIINTA 182 (291)
T ss_dssp SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT---TCEEEEEC
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCEEEEEe
Confidence 6899887644321 1222222 234455566666 67777654
No 494
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=44.09 E-value=57 Score=25.34 Aligned_cols=118 Identities=10% Similarity=0.014 Sum_probs=63.2
Q ss_pred CcccH--HHHHHHHHCCCCeEEEeeCch--hhccCCCCCCeeEEecCCcccCCCccEEEeccccccCChHHHHHHHHHHH
Q 030291 24 GGTGA--FARIISEAFPGIKCTVLDLPH--AVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDDEDCLKLLKKCR 99 (180)
Q Consensus 24 ~G~G~--~~~~l~~~~~~~~~~~~D~~~--~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~ 99 (180)
+|.|. .++.|.+. +..+++.|... .....+ ...+.+..+...+....+|+|+.+-.+.. .++. +.+.+
T Consensus 21 ~G~G~sglA~~l~~~--G~~V~g~D~~~~~~~~~L~-~~gi~~~~g~~~~~~~~~d~vV~spgi~~-~~p~----~~~a~ 92 (469)
T 1j6u_A 21 GGIGMSAVALHEFSN--GNDVYGSNIEETERTAYLR-KLGIPIFVPHSADNWYDPDLVIKTPAVRD-DNPE----IVRAR 92 (469)
T ss_dssp TSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHH-HTTCCEESSCCTTSCCCCSEEEECTTCCT-TCHH----HHHHH
T ss_pred cccCHHHHHHHHHhC--CCEEEEEcCCCCHHHHHHH-hCCCEEECCCCHHHCCCCCEEEECCCcCC-CCHH----HHHHH
Confidence 44454 44444444 78899999832 222211 23455554422223446899888776643 2222 33333
Q ss_pred HhhccCCCCcEEEEEEeeeCCCCCchhhhhhhh--ccceeeEeecCCcccCHHHHHHHHHHcCCeEE
Q 030291 100 EAIASNGERGKVLIIDIVIDEKEDDRELTESKL--LFDIFMNFNVGGKERTEQEWGSLFVNAGFTHY 164 (180)
Q Consensus 100 ~~L~p~~~~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 164 (180)
+ . |.-++...- .+..... ......-++.+++..|..-+..+|+++|++..
T Consensus 93 ~---~----gi~v~~~~e--------~l~~~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~~~ 144 (469)
T 1j6u_A 93 M---E----RVPIENRLH--------YFRDTLKREKKEEFAVTGTDGKTTTTAMVAHVLKHLRKSPT 144 (469)
T ss_dssp H---T----TCCEEEHHH--------HHHHHHHHHCCCEEEEECSSSHHHHHHHHHHHHHHTTCCCE
T ss_pred H---c----CCcEEEHHH--------HHHHHHhccCCCEEEEECCCCHHHHHHHHHHHHHHcCCCce
Confidence 3 2 433443210 0111111 12334556678888888999999999998753
No 495
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=43.91 E-value=41 Score=24.18 Aligned_cols=85 Identities=19% Similarity=0.214 Sum_probs=47.9
Q ss_pred CCeEEEeCCcc-cH-HHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcccCCCccEEEeccccccCCh-HHH
Q 030291 16 LRSMVDVGGGT-GA-FARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQFIPPSDAFFFKTVFHFFDD-EDC 91 (180)
Q Consensus 16 ~~~iLdiG~G~-G~-~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~~~~~D~v~~~~~l~~~~~-~~~ 91 (180)
..+|.=||+|. |. ++..+++. +.++++.|.+. ..+.+.+. ++.. ..+..+... .|+|+. .+++ ...
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~~-g~~~-~~~~~~~~~-aDvvi~-----~vp~~~~~ 84 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW--PGGVTVYDIRIEAMTPLAEA-GATL-ADSVADVAA-ADLIHI-----TVLDDAQV 84 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS--TTCEEEECSSTTTSHHHHHT-TCEE-CSSHHHHTT-SSEEEE-----CCSSHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHC-CCEE-cCCHHHHHh-CCEEEE-----ECCChHHH
Confidence 34688888876 33 33344443 56799999843 44433321 2222 223322334 888886 3343 334
Q ss_pred HHHHHHHHHhhccCCCCcEEEEE
Q 030291 92 LKLLKKCREAIASNGERGKVLII 114 (180)
Q Consensus 92 ~~~l~~~~~~L~p~~~~G~~~~~ 114 (180)
.++++.+...+++ |.+++.
T Consensus 85 ~~v~~~l~~~l~~----g~ivv~ 103 (296)
T 3qha_A 85 REVVGELAGHAKP----GTVIAI 103 (296)
T ss_dssp HHHHHHHHTTCCT----TCEEEE
T ss_pred HHHHHHHHHhcCC----CCEEEE
Confidence 4677888888888 555553
No 496
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=43.77 E-value=87 Score=22.42 Aligned_cols=67 Identities=19% Similarity=0.224 Sum_probs=42.6
Q ss_pred CCCeEEEeCCcccH---HHHHHHHHCCCCeEEEeeCch-hhccCC-----CCCCeeEEecCCccc-------------CC
Q 030291 15 GLRSMVDVGGGTGA---FARIISEAFPGIKCTVLDLPH-AVTDMP-----QTDNLKYIEGDMFQF-------------IP 72 (180)
Q Consensus 15 ~~~~iLdiG~G~G~---~~~~l~~~~~~~~~~~~D~~~-~~~~a~-----~~~~~~~~~~d~~~~-------------~~ 72 (180)
.++++|=.|++.|. ++..|++. +.+++.++.+. .++... ...++.++..|+.+. .+
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARR--GARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 35678878777652 44445555 67888888743 333322 145788999999652 13
Q ss_pred CccEEEecccc
Q 030291 73 PSDAFFFKTVF 83 (180)
Q Consensus 73 ~~D~v~~~~~l 83 (180)
..|+++.+..+
T Consensus 108 ~id~lvnnAg~ 118 (301)
T 3tjr_A 108 GVDVVFSNAGI 118 (301)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68999887554
No 497
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=43.61 E-value=78 Score=21.86 Aligned_cols=67 Identities=15% Similarity=0.211 Sum_probs=43.0
Q ss_pred CCCeEEEeCCcccH---HHHHHHHHCCCCeEEEeeCch-hhccCCC--CCCeeEEecCCccc-------------CCCcc
Q 030291 15 GLRSMVDVGGGTGA---FARIISEAFPGIKCTVLDLPH-AVTDMPQ--TDNLKYIEGDMFQF-------------IPPSD 75 (180)
Q Consensus 15 ~~~~iLdiG~G~G~---~~~~l~~~~~~~~~~~~D~~~-~~~~a~~--~~~~~~~~~d~~~~-------------~~~~D 75 (180)
.++++|=.|++.|. ++..|++. +.+++.++.+. .++...+ ..++.++..|+.+. .+..|
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 85 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKG--GAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVD 85 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 35678878776652 45555555 67899888743 3333322 46788899998652 13689
Q ss_pred EEEecccc
Q 030291 76 AFFFKTVF 83 (180)
Q Consensus 76 ~v~~~~~l 83 (180)
+++.+...
T Consensus 86 ~li~~Ag~ 93 (261)
T 3n74_A 86 ILVNNAGI 93 (261)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 98886554
No 498
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=43.46 E-value=26 Score=26.16 Aligned_cols=79 Identities=13% Similarity=0.108 Sum_probs=45.7
Q ss_pred CCeEEEeCCcc--cHHHHHHHHHCCCCeEEEeeCch-hhccCCCCCCeeEEecCCcccCC----CccEEEeccccccCCh
Q 030291 16 LRSMVDVGGGT--GAFARIISEAFPGIKCTVLDLPH-AVTDMPQTDNLKYIEGDMFQFIP----PSDAFFFKTVFHFFDD 88 (180)
Q Consensus 16 ~~~iLdiG~G~--G~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~~~~~~~~~~d~~~~~~----~~D~v~~~~~l~~~~~ 88 (180)
..+|.=||+|. +.++..+.+. +.++++.|.+. .++.+.+. ++.. ..|..+... ..|+|+. .+|.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~--G~~V~~~dr~~~~~~~a~~~-G~~~-~~~~~e~~~~a~~~aDlVil-----avP~ 78 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAA--NHSVFGYNRSRSGAKSAVDE-GFDV-SADLEATLQRAAAEDALIVL-----AVPM 78 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHT-TCCE-ESCHHHHHHHHHHTTCEEEE-----CSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc-CCee-eCCHHHHHHhcccCCCEEEE-----eCCH
Confidence 45788888875 3455555555 56799999854 55554432 2221 222211111 3688887 3444
Q ss_pred HHHHHHHHHHHHhhcc
Q 030291 89 EDCLKLLKKCREAIAS 104 (180)
Q Consensus 89 ~~~~~~l~~~~~~L~p 104 (180)
.....+++++... +|
T Consensus 79 ~~~~~vl~~l~~~-~~ 93 (341)
T 3ktd_A 79 TAIDSLLDAVHTH-AP 93 (341)
T ss_dssp HHHHHHHHHHHHH-CT
T ss_pred HHHHHHHHHHHcc-CC
Confidence 4555778888775 77
No 499
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=43.26 E-value=85 Score=22.15 Aligned_cols=68 Identities=13% Similarity=0.073 Sum_probs=41.6
Q ss_pred cCCCeEEEeCCcccH---HHHHHHHHCCCCeEEEeeCch-hhccCC----C-CCCeeEEecCCccc-------------C
Q 030291 14 QGLRSMVDVGGGTGA---FARIISEAFPGIKCTVLDLPH-AVTDMP----Q-TDNLKYIEGDMFQF-------------I 71 (180)
Q Consensus 14 ~~~~~iLdiG~G~G~---~~~~l~~~~~~~~~~~~D~~~-~~~~a~----~-~~~~~~~~~d~~~~-------------~ 71 (180)
..++++|=.|++.|. ++..|++. +++++.++.+. .++... . ..++.++..|+.+. .
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAAR--GIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 445678888876653 44455555 77888888743 332221 1 46788899999652 1
Q ss_pred CCccEEEecccc
Q 030291 72 PPSDAFFFKTVF 83 (180)
Q Consensus 72 ~~~D~v~~~~~l 83 (180)
+..|+++.+...
T Consensus 100 g~id~lv~nAg~ 111 (279)
T 3sju_A 100 GPIGILVNSAGR 111 (279)
T ss_dssp CSCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 368998886554
No 500
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=42.80 E-value=33 Score=25.29 Aligned_cols=89 Identities=12% Similarity=0.181 Sum_probs=52.3
Q ss_pred CCeEEEeCCcc-c-HHHHHHHHHCCCCeEEEeeCch-hhccCCC-----------C-------------CCeeEEecCCc
Q 030291 16 LRSMVDVGGGT-G-AFARIISEAFPGIKCTVLDLPH-AVTDMPQ-----------T-------------DNLKYIEGDMF 68 (180)
Q Consensus 16 ~~~iLdiG~G~-G-~~~~~l~~~~~~~~~~~~D~~~-~~~~a~~-----------~-------------~~~~~~~~d~~ 68 (180)
..+|-=||+|. | .++..++.. +..+++.|.++ .++.+.+ . .++++ ..|..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~~~ 82 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLA 82 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCCHH
Confidence 35677888876 3 345555555 66799999854 5544421 0 12333 23432
Q ss_pred ccCCCccEEEeccccccCCh-HHHHHHHHHHHHhhccCCCCcEEEEEE
Q 030291 69 QFIPPSDAFFFKTVFHFFDD-EDCLKLLKKCREAIASNGERGKVLIID 115 (180)
Q Consensus 69 ~~~~~~D~v~~~~~l~~~~~-~~~~~~l~~~~~~L~p~~~~G~~~~~~ 115 (180)
+.....|+|+..-. ++ .....+++++...++| +.++++.
T Consensus 83 eav~~aDlVieavp----e~~~~k~~v~~~l~~~~~~----~~Ii~s~ 122 (319)
T 2dpo_A 83 EAVEGVVHIQECVP----ENLDLKRKIFAQLDSIVDD----RVVLSSS 122 (319)
T ss_dssp HHTTTEEEEEECCC----SCHHHHHHHHHHHHTTCCS----SSEEEEC
T ss_pred HHHhcCCEEEEecc----CCHHHHHHHHHHHHhhCCC----CeEEEEe
Confidence 34557899887432 12 2345778999999988 6666544
Done!