BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 030292
         (180 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9FIX2|AIG2L_ARATH AIG2-like protein OS=Arabidopsis thaliana GN=At5g39720 PE=1 SV=1
          Length = 165

 Score =  150 bits (378), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 66/143 (46%), Positives = 96/143 (67%)

Query: 18  HNVFVYGSLLADDVVRVLLKRIPQSSSAILPGYRRFSIKGRVYPAILPVENKHVTGRVLF 77
           HNVFVYGS    DV+ V+L R P+  SA LPG++RF +KGR+YP I+P E   V G+VL 
Sbjct: 10  HNVFVYGSFQDPDVINVMLDRTPEIVSATLPGFQRFRLKGRLYPCIVPSEKGEVHGKVLM 69

Query: 78  GISDPELLVLDEFEDFEYQRTTADVSLVDTADKLQVQTYVWTNKNDPNLYGDWDFEEWRR 137
           G++  EL  LD  E  EY+R T  +   D ++K+ V+TY+W NK DP+++G+W+FEEW+R
Sbjct: 70  GVTSDELENLDAVEGNEYERVTVGIVREDNSEKMAVKTYMWINKADPDMFGEWNFEEWKR 129

Query: 138 LHMKDFVKMTAGFVEELELPEAK 160
           LH K F++     +E  + P+ +
Sbjct: 130 LHKKKFIETFKKIMECKKKPQGQ 152


>sp|P54121|AIG2_ARATH Protein AIG2 OS=Arabidopsis thaliana GN=AIG2 PE=2 SV=1
          Length = 170

 Score =  147 bits (371), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 70/157 (44%), Positives = 101/157 (64%), Gaps = 1/157 (0%)

Query: 18  HNVFVYGSLLADDVVRVLLKRIPQSSSAILPGYRRFSIKGRVYPAILPVENKHVTGRVLF 77
           H+VFVYGS     VV ++L+  P   SA L GY  + +KGR++P I P +N  + G++L 
Sbjct: 10  HDVFVYGSFQEPAVVNLILECAPVMVSAQLHGYHLYRLKGRLHPCISPSDNGLINGKILT 69

Query: 78  GISDPELLVLDEFEDFEYQRTTADVSLVDTADKLQVQTYVWTNKNDPNLYGDWDFEEWRR 137
           G++D +L  LD  E  EY R T +V L DT +K QV+T VW NK+DPN+YG+WDFEEW+R
Sbjct: 70  GLTDSQLESLDMIEGTEYVRKTVEVVLTDTLEKKQVETIVWANKDDPNMYGEWDFEEWKR 129

Query: 138 LHMKDFVKMTAGFVEELELPEAKPRVAAYESFYQQNA 174
           LHM+ F++    F+E  + P  + R   +E F Q ++
Sbjct: 130 LHMEKFIEAATKFMEWKKNPNGRSR-EEFEKFVQDDS 165


>sp|Q57876|Y434_METJA Gamma-glutamylcyclotransferase and UPF0331 family protein MJ0434
           OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
           DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0434
           PE=3 SV=1
          Length = 222

 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 4/92 (4%)

Query: 13  NHNHKHNVFVYGSLLADDVVRVLLKRIPQSSSAILPGYRRFSIKGRVYPAILPVENKHVT 72
           N N+K+NVF YG L+  + +  L+ R+P+     + GY +F  +   Y      E  ++ 
Sbjct: 115 NKNNKYNVFAYGELMKKERLLELINRVPKMIEGRVYGYEKFFDETIGYYGARKKEGSYID 174

Query: 73  GRVLFGISDPELLVLDEFEDFEY----QRTTA 100
           G +L  I+D EL + D++ED +     ++TTA
Sbjct: 175 GIILLDITDKELGIFDDYEDLDVYYIREKTTA 206


>sp|Q899T2|Y086_CLOTE UPF0182 protein CTC_00086 OS=Clostridium tetani (strain
           Massachusetts / E88) GN=CTC_00086 PE=3 SV=1
          Length = 887

 Score = 32.3 bits (72), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 6/69 (8%)

Query: 90  FEDFEYQRTTADVSLVDTADKLQVQTYVWTNKNDPNLYGDWDFEEWRRLHMKDFVKMTAG 149
           +ED  Y R +A V ++D  D   +  Y+ TNKNDP +     + +  +   KD+ K+  G
Sbjct: 576 YEDINYIRNSAKV-IIDAIDG-DINFYI-TNKNDPIIV---SYSKIFKNLFKDYSKIPEG 629

Query: 150 FVEELELPE 158
             E L+ PE
Sbjct: 630 IKEHLKYPE 638


>sp|Q9KSJ7|Y1259_VIBCH UPF0176 protein VC_1259 OS=Vibrio cholerae serotype O1 (strain ATCC
           39315 / El Tor Inaba N16961) GN=VC_1259 PE=3 SV=2
          Length = 327

 Score = 29.6 bits (65), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 9/68 (13%)

Query: 41  QSSSAILPGYRRFSIKGRVYPAILPVEN---KHVTGRVLFG------ISDPELLVLDEFE 91
           + SSA  P + R  +K +     + VE    +HV G  +        ISDPE+LV+D   
Sbjct: 75  KESSASEPPFNRTKVKLKKEIVTMGVEGIDPRHVVGTYVKPQDWNALISDPEVLVVDTRN 134

Query: 92  DFEYQRTT 99
           D+E Q  T
Sbjct: 135 DYEVQLGT 142


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.134    0.393 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,060,874
Number of Sequences: 539616
Number of extensions: 2760941
Number of successful extensions: 5882
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 5879
Number of HSP's gapped (non-prelim): 7
length of query: 180
length of database: 191,569,459
effective HSP length: 110
effective length of query: 70
effective length of database: 132,211,699
effective search space: 9254818930
effective search space used: 9254818930
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)