Query 030294
Match_columns 179
No_of_seqs 110 out of 154
Neff 5.7
Searched_HMMs 13730
Date Mon Mar 25 18:41:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030294.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030294hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1l5ja1 a.118.15.1 (A:1-160) A 38.4 18 0.0013 26.4 4.4 17 111-127 7-23 (160)
2 d2f6ma1 a.2.17.1 (A:322-385) V 30.1 44 0.0032 20.5 4.7 43 67-109 17-59 (64)
3 d1uptb_ a.193.1.1 (B:) Golgi a 20.8 36 0.0026 20.6 2.7 32 71-107 24-55 (58)
4 d1eexb_ c.51.3.1 (B:) Diol deh 14.4 35 0.0025 25.2 1.8 15 112-126 125-139 (178)
5 d1bh9b_ a.22.1.3 (B:) TAF(II)2 13.4 50 0.0037 21.5 2.2 35 141-175 7-53 (89)
6 d1iwpb_ c.51.3.1 (B:) Diol deh 12.8 41 0.003 24.9 1.8 15 112-126 127-141 (184)
7 d1ezfa_ a.128.1.2 (A:) Squalen 9.1 1.2E+02 0.0088 23.4 3.6 25 150-174 129-153 (333)
8 d1st6a3 a.24.9.1 (A:253-371) V 6.7 1.8E+02 0.013 19.5 3.2 29 139-167 63-91 (119)
9 d1fxkc_ a.2.5.1 (C:) Prefoldin 6.0 3.4E+02 0.025 17.2 6.4 25 67-91 93-117 (133)
10 d3e46a1 a.5.2.1 (A:157-198) Ub 6.0 1.3E+02 0.0096 16.4 1.7 23 154-176 5-27 (42)
No 1
>d1l5ja1 a.118.15.1 (A:1-160) Aconitase B, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=38.40 E-value=18 Score=26.37 Aligned_cols=17 Identities=29% Similarity=0.431 Sum_probs=13.8
Q ss_pred HhhHHHHHcCCCCCCCC
Q 030294 111 DENKARKAAGEEPLPEE 127 (179)
Q Consensus 111 ~EN~~R~~~ge~plPee 127 (179)
.|=+.|+++|-||+|-+
T Consensus 7 ~~i~eR~~~GlpPlPLd 23 (160)
T d1l5ja1 7 KHVAERAAEGIAPKPLD 23 (160)
T ss_dssp HHHHHHHHTTCCCCCCC
T ss_pred HHHHHHHHCCCCCCCCC
Confidence 45567889999999984
No 2
>d2f6ma1 a.2.17.1 (A:322-385) Vacuolar protein sorting-associated protein 23, VPS23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.10 E-value=44 Score=20.53 Aligned_cols=43 Identities=23% Similarity=0.199 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030294 67 LERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKR 109 (179)
Q Consensus 67 Lek~l~~l~~~vD~l~~Eq~k~~~yqR~~~rqq~~~~~~~~kR 109 (179)
++..+..|-+.+..=.-+-.-|-+.-|.++|+|--.-..++|=
T Consensus 17 ieDaiy~L~~aL~~G~I~~d~ylK~vR~LaReQF~~RAl~~KI 59 (64)
T d2f6ma1 17 LTDTIEALSRMLHRGTIPLDTFVKQGRELARQQFLVRWHIQRI 59 (64)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555656655555567789999999999987666555553
No 3
>d1uptb_ a.193.1.1 (B:) Golgi autoantigen, golgin-245 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.85 E-value=36 Score=20.62 Aligned_cols=32 Identities=28% Similarity=0.427 Sum_probs=21.7
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030294 71 MEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQ 107 (179)
Q Consensus 71 l~~l~~~vD~l~~Eq~k~~~yqR~~~rqq~~~~~~~~ 107 (179)
|--.+-.|=-+..+| -|+-+.|++++..+|++
T Consensus 24 laKVi~av~kF~~~Q-----~q~iL~kE~~r~~swl~ 55 (58)
T d1uptb_ 24 MAKVITTVLKFPDDQ-----TQKILEREDARLMSWLR 55 (58)
T ss_dssp HHHHHHHHTTCCHHH-----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHH-----HHHHHHHHhcchhhHHh
Confidence 333344444455554 47889999999999986
No 4
>d1eexb_ c.51.3.1 (B:) Diol dehydratase, beta subunit {Klebsiella oxytoca [TaxId: 571]}
Probab=14.45 E-value=35 Score=25.15 Aligned_cols=15 Identities=47% Similarity=0.581 Sum_probs=12.7
Q ss_pred hhHHHHHcCCCCCCC
Q 030294 112 ENKARKAAGEEPLPE 126 (179)
Q Consensus 112 EN~~R~~~ge~plPe 126 (179)
-||+|-++||.|.|-
T Consensus 125 ~NAARlvKG~~p~Pv 139 (178)
T d1eexb_ 125 KNAARYAKRESPQPV 139 (178)
T ss_dssp HHHHHHHTTCCCCCC
T ss_pred HHHHHHhccCCCCCc
Confidence 399999999988764
No 5
>d1bh9b_ a.22.1.3 (B:) TAF(II)28 {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.41 E-value=50 Score=21.47 Aligned_cols=35 Identities=17% Similarity=0.378 Sum_probs=21.9
Q ss_pred cchHHH----HHHHHHHHHHHHHHh--------hHHHHHHHHHHHHh
Q 030294 141 PRLESF----LIANRIANYCNQING--------VTGQSFSRLYLTKA 175 (179)
Q Consensus 141 SRL~sl----L~s~Qi~~yc~~i~~--------~~~~~l~Klfl~~~ 175 (179)
+|+|++ +--..|..++.++.+ .+-.+++|+|+.+-
T Consensus 7 ~RyE~fRRs~~~K~~vkrl~~~~~g~sv~~~v~i~v~giaKvFvGEi 53 (89)
T d1bh9b_ 7 NRYEMYRRSAFPKAAIKRLIQSITGTSVSQNVVIAMSGISKVFVGEV 53 (89)
T ss_dssp HHHHHHHHCCCCHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHHHHH
Confidence 345555 445566666666643 34578999998754
No 6
>d1iwpb_ c.51.3.1 (B:) Diol dehydratase, beta subunit {Klebsiella pneumoniae [TaxId: 573]}
Probab=12.83 E-value=41 Score=24.86 Aligned_cols=15 Identities=47% Similarity=0.563 Sum_probs=12.7
Q ss_pred hhHHHHHcCCCCCCC
Q 030294 112 ENKARKAAGEEPLPE 126 (179)
Q Consensus 112 EN~~R~~~ge~plPe 126 (179)
-||+|-++|+.|.|-
T Consensus 127 ~NAARlvKG~~p~Pv 141 (184)
T d1iwpb_ 127 KNAARYARKESPSPV 141 (184)
T ss_dssp HHHHHHHTTCCCCCC
T ss_pred HHHHHHhcCCCCCCc
Confidence 399999999988665
No 7
>d1ezfa_ a.128.1.2 (A:) Squalene synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.12 E-value=1.2e+02 Score=23.36 Aligned_cols=25 Identities=28% Similarity=0.687 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHH
Q 030294 150 NRIANYCNQINGVTGQSFSRLYLTK 174 (179)
Q Consensus 150 ~Qi~~yc~~i~~~~~~~l~Klfl~~ 174 (179)
.+.+.||..+.+..|..++++|...
T Consensus 129 ~dL~~Ycy~VAG~VG~~l~~l~~~~ 153 (333)
T d1ezfa_ 129 QEWDKYCHYVAGLVGIGLSRLFSAS 153 (333)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 4678999999999999999999764
No 8
>d1st6a3 a.24.9.1 (A:253-371) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=6.74 E-value=1.8e+02 Score=19.49 Aligned_cols=29 Identities=10% Similarity=0.148 Sum_probs=24.0
Q ss_pred CCcchHHHHHHHHHHHHHHHHHhhHHHHH
Q 030294 139 EPPRLESFLIANRIANYCNQINGVTGQSF 167 (179)
Q Consensus 139 ePSRL~slL~s~Qi~~yc~~i~~~~~~~l 167 (179)
+|-|-+-+=+...|+.+++++..++.++-
T Consensus 63 ~~~r~~Il~~c~ei~~lt~qLadLr~~G~ 91 (119)
T d1st6a3 63 GKERREILGTCKTLGQMTDQLADLRARGQ 91 (119)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 56677888889999999999999986653
No 9
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=6.03 E-value=3.4e+02 Score=17.18 Aligned_cols=25 Identities=4% Similarity=0.040 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHH
Q 030294 67 LERNMEFLIECMDDLSVEQQKFQFY 91 (179)
Q Consensus 67 Lek~l~~l~~~vD~l~~Eq~k~~~y 91 (179)
+++.++.+-.+++.+..+..+..-.
T Consensus 93 l~~ri~~l~~~~~~l~~~~~~~~~~ 117 (133)
T d1fxkc_ 93 IKSQKNELESTLQKMGENLRAITDI 117 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555554444443333
No 10
>d3e46a1 a.5.2.1 (A:157-198) Ubiquitin-conjugating enzyme E2-25 kDa, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.01 E-value=1.3e+02 Score=16.43 Aligned_cols=23 Identities=26% Similarity=0.446 Sum_probs=16.6
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhh
Q 030294 154 NYCNQINGVTGQSFSRLYLTKAL 176 (179)
Q Consensus 154 ~yc~~i~~~~~~~l~Klfl~~~l 176 (179)
.|...|...|+.+|-|--+.-||
T Consensus 5 eyt~kidklca~gf~knavi~al 27 (42)
T d3e46a1 5 EYTKKIENLCAAGFDRNAVIVAL 27 (42)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHccccccceeeee
Confidence 57888899998888775544443
Done!