Query 030299
Match_columns 179
No_of_seqs 158 out of 1470
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 18:49:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030299.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030299hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dou_A Ribosomal RNA large sub 100.0 6.7E-30 2.3E-34 202.8 14.1 141 18-173 2-163 (191)
2 2px2_A Genome polyprotein [con 99.9 3.9E-28 1.3E-32 201.5 8.9 125 20-171 53-207 (269)
3 3gcz_A Polyprotein; flavivirus 99.9 4.9E-25 1.7E-29 184.9 13.5 132 19-173 69-227 (282)
4 3evf_A RNA-directed RNA polyme 99.9 5.1E-24 1.8E-28 178.5 13.5 131 20-173 54-210 (277)
5 2plw_A Ribosomal RNA methyltra 99.9 3.4E-23 1.1E-27 162.1 15.5 143 20-173 1-178 (201)
6 3eld_A Methyltransferase; flav 99.9 1.3E-23 4.5E-28 177.4 13.0 130 19-173 60-217 (300)
7 2nyu_A Putative ribosomal RNA 99.9 2E-22 6.9E-27 156.8 15.4 150 20-173 1-169 (196)
8 3p8z_A Mtase, non-structural p 99.9 1.5E-22 5.2E-27 166.2 10.7 101 19-144 57-168 (267)
9 2oxt_A Nucleoside-2'-O-methylt 99.8 1.9E-19 6.4E-24 149.9 12.6 126 20-173 54-211 (265)
10 4auk_A Ribosomal RNA large sub 99.8 1.8E-19 6.3E-24 156.6 7.6 94 18-134 181-285 (375)
11 2p41_A Type II methyltransfera 99.8 2.1E-18 7.1E-23 146.2 12.0 126 19-172 61-216 (305)
12 3lkz_A Non-structural protein 99.8 2.6E-18 8.8E-23 145.0 12.2 127 20-171 74-228 (321)
13 1ej0_A FTSJ; methyltransferase 99.8 3.6E-17 1.2E-21 123.1 17.3 141 20-172 1-159 (180)
14 2wa2_A Non-structural protein 99.7 2.4E-18 8.1E-23 144.0 9.2 126 19-172 61-218 (276)
15 3r24_A NSP16, 2'-O-methyl tran 99.5 1.9E-14 6.5E-19 121.6 9.0 109 40-172 108-239 (344)
16 3id6_C Fibrillarin-like rRNA/T 99.4 9.6E-13 3.3E-17 107.6 7.1 92 20-129 56-156 (232)
17 2xyq_A Putative 2'-O-methyl tr 99.3 4.3E-12 1.5E-16 107.0 7.6 110 38-172 60-195 (290)
18 3hp7_A Hemolysin, putative; st 99.3 2.1E-11 7.3E-16 102.8 10.5 92 19-129 63-161 (291)
19 4df3_A Fibrillarin-like rRNA/T 99.1 1.7E-10 5.7E-15 94.5 9.3 73 39-128 75-156 (233)
20 1ixk_A Methyltransferase; open 99.1 3E-10 1E-14 95.9 9.7 76 40-135 117-203 (315)
21 2frx_A Hypothetical protein YE 99.1 2.9E-10 9.9E-15 101.6 8.6 76 41-135 117-203 (479)
22 3m4x_A NOL1/NOP2/SUN family pr 99.0 2.5E-10 8.7E-15 101.6 7.4 78 40-136 104-192 (456)
23 2b9e_A NOL1/NOP2/SUN domain fa 99.0 4E-10 1.4E-14 95.5 8.2 78 40-135 101-190 (309)
24 2ipx_A RRNA 2'-O-methyltransfe 99.0 2.8E-10 9.7E-15 90.9 6.3 91 20-128 57-156 (233)
25 3ajd_A Putative methyltransfer 99.0 5.4E-10 1.8E-14 92.2 7.1 80 40-135 82-172 (274)
26 3m6w_A RRNA methylase; rRNA me 99.0 3.2E-10 1.1E-14 101.1 5.5 76 40-135 100-186 (464)
27 2yxl_A PH0851 protein, 450AA l 99.0 1.3E-09 4.5E-14 96.2 8.1 78 40-135 258-346 (450)
28 1nt2_A Fibrillarin-like PRE-rR 98.9 1.3E-09 4.4E-14 86.8 6.9 71 39-127 55-134 (210)
29 3eey_A Putative rRNA methylase 98.9 4.9E-09 1.7E-13 81.1 9.8 72 39-129 20-103 (197)
30 4hg2_A Methyltransferase type 98.9 1.8E-09 6.3E-14 88.9 7.4 67 40-129 38-109 (257)
31 3opn_A Putative hemolysin; str 98.9 2.3E-09 7.8E-14 87.0 7.0 57 19-89 15-71 (232)
32 4fzv_A Putative methyltransfer 98.9 2.2E-09 7.4E-14 92.9 6.9 93 40-152 147-273 (359)
33 1sqg_A SUN protein, FMU protei 98.9 5.1E-09 1.7E-13 91.7 8.9 77 40-135 245-331 (429)
34 3mgg_A Methyltransferase; NYSG 98.9 4.1E-09 1.4E-13 85.6 7.6 81 27-128 23-114 (276)
35 4gek_A TRNA (CMO5U34)-methyltr 98.8 4.9E-09 1.7E-13 86.4 7.4 68 39-127 68-147 (261)
36 3ege_A Putative methyltransfer 98.8 6.3E-09 2.2E-13 84.4 8.0 66 40-128 33-103 (261)
37 3mti_A RRNA methylase; SAM-dep 98.8 3.4E-09 1.2E-13 81.2 5.6 68 38-127 19-97 (185)
38 3dh0_A SAM dependent methyltra 98.8 8.8E-09 3E-13 80.6 7.9 79 29-128 26-115 (219)
39 3f4k_A Putative methyltransfer 98.8 1.3E-08 4.3E-13 81.6 8.8 69 39-129 44-124 (257)
40 3ujc_A Phosphoethanolamine N-m 98.8 1.5E-08 5.2E-13 81.1 9.3 68 39-128 53-129 (266)
41 1fbn_A MJ fibrillarin homologu 98.8 1.1E-08 3.8E-13 81.6 8.4 71 39-127 72-151 (230)
42 3fpf_A Mtnas, putative unchara 98.8 1.7E-08 5.7E-13 85.4 9.8 67 39-128 120-197 (298)
43 1vl5_A Unknown conserved prote 98.8 1.1E-08 3.9E-13 82.4 8.4 76 29-128 26-112 (260)
44 1g8a_A Fibrillarin-like PRE-rR 98.8 2.4E-08 8E-13 79.1 10.0 73 39-128 71-152 (227)
45 2fca_A TRNA (guanine-N(7)-)-me 98.8 2.2E-08 7.6E-13 79.4 9.6 76 31-127 30-116 (213)
46 3ou2_A SAM-dependent methyltra 98.8 1.5E-08 5.1E-13 78.8 8.1 76 29-128 34-116 (218)
47 3kkz_A Uncharacterized protein 98.8 1.8E-08 6.3E-13 81.6 8.8 69 39-129 44-124 (267)
48 3hem_A Cyclopropane-fatty-acyl 98.8 1.9E-08 6.6E-13 83.1 9.0 66 39-129 70-147 (302)
49 2bm8_A Cephalosporin hydroxyla 98.8 2.6E-08 8.8E-13 80.5 9.2 72 41-128 81-161 (236)
50 3lpm_A Putative methyltransfer 98.8 4.2E-08 1.4E-12 79.7 10.5 74 39-132 46-132 (259)
51 3p9n_A Possible methyltransfer 98.8 1.1E-08 3.7E-13 79.0 6.6 69 40-128 43-122 (189)
52 3bkx_A SAM-dependent methyltra 98.8 4E-08 1.4E-12 79.5 9.9 80 31-129 34-132 (275)
53 3dtn_A Putative methyltransfer 98.8 3.7E-08 1.3E-12 77.9 9.5 68 39-128 42-118 (234)
54 3dli_A Methyltransferase; PSI- 98.8 7.4E-09 2.5E-13 82.7 5.3 73 36-129 36-111 (240)
55 1yzh_A TRNA (guanine-N(7)-)-me 98.7 2.1E-08 7.1E-13 78.9 7.6 70 40-128 40-120 (214)
56 3e05_A Precorrin-6Y C5,15-meth 98.7 2.2E-08 7.7E-13 77.9 7.6 70 39-129 38-118 (204)
57 3h2b_A SAM-dependent methyltra 98.7 2.9E-08 1E-12 76.8 8.1 65 42-129 42-112 (203)
58 1pjz_A Thiopurine S-methyltran 98.7 8.4E-09 2.9E-13 81.1 5.0 68 39-128 20-110 (203)
59 3evz_A Methyltransferase; NYSG 98.7 2.9E-08 9.9E-13 78.4 8.1 72 38-131 52-135 (230)
60 4dzr_A Protein-(glutamine-N5) 98.7 8.5E-09 2.9E-13 79.7 4.8 83 32-131 21-113 (215)
61 3q87_B N6 adenine specific DNA 98.7 8.6E-09 2.9E-13 78.9 4.8 65 40-129 22-88 (170)
62 3mb5_A SAM-dependent methyltra 98.7 2.1E-08 7.2E-13 80.6 7.3 69 39-128 91-171 (255)
63 3hnr_A Probable methyltransfer 98.7 9.8E-09 3.3E-13 80.4 5.2 65 40-128 44-115 (220)
64 3g5t_A Trans-aconitate 3-methy 98.7 2.2E-08 7.7E-13 82.6 7.2 75 40-128 35-122 (299)
65 3m33_A Uncharacterized protein 98.7 1.6E-08 5.4E-13 80.4 6.1 66 39-126 46-118 (226)
66 3lbf_A Protein-L-isoaspartate 98.7 2.8E-08 9.6E-13 77.5 7.2 67 40-129 76-153 (210)
67 3gdh_A Trimethylguanosine synt 98.7 1.4E-08 4.7E-13 81.0 5.5 68 40-131 77-156 (241)
68 3a27_A TYW2, uncharacterized p 98.7 3.7E-08 1.3E-12 81.2 8.2 72 36-129 114-196 (272)
69 3gru_A Dimethyladenosine trans 98.7 2.2E-08 7.4E-13 84.4 6.7 68 40-130 49-125 (295)
70 3l8d_A Methyltransferase; stru 98.7 3.9E-08 1.3E-12 77.9 7.8 68 39-129 51-126 (242)
71 4fsd_A Arsenic methyltransfera 98.7 2.9E-08 9.9E-13 85.4 7.6 77 39-129 81-176 (383)
72 2frn_A Hypothetical protein PH 98.7 2.5E-08 8.6E-13 82.4 6.8 69 38-129 122-202 (278)
73 3g5l_A Putative S-adenosylmeth 98.7 4.8E-08 1.6E-12 78.2 8.3 66 41-128 44-117 (253)
74 1nkv_A Hypothetical protein YJ 98.7 6.5E-08 2.2E-12 77.3 9.0 73 32-128 28-112 (256)
75 1ri5_A MRNA capping enzyme; me 98.7 1.7E-08 5.7E-13 82.3 5.6 101 6-129 21-143 (298)
76 3vc1_A Geranyl diphosphate 2-C 98.7 3.7E-08 1.3E-12 81.9 7.7 68 39-128 115-194 (312)
77 1xdz_A Methyltransferase GIDB; 98.7 1.6E-08 5.5E-13 81.2 5.2 70 40-127 69-149 (240)
78 1i1n_A Protein-L-isoaspartate 98.7 2.5E-08 8.5E-13 78.8 6.2 71 39-129 75-161 (226)
79 2esr_A Methyltransferase; stru 98.7 4.1E-08 1.4E-12 74.5 7.2 69 39-128 29-109 (177)
80 3njr_A Precorrin-6Y methylase; 98.7 5.1E-08 1.8E-12 76.8 7.9 66 39-127 53-130 (204)
81 2gb4_A Thiopurine S-methyltran 98.7 5.6E-08 1.9E-12 79.6 8.4 68 40-129 67-162 (252)
82 3bus_A REBM, methyltransferase 98.7 5.4E-08 1.8E-12 78.6 8.2 68 39-128 59-138 (273)
83 3dlc_A Putative S-adenosyl-L-m 98.7 6E-08 2E-12 75.1 8.1 66 40-128 43-120 (219)
84 2yqz_A Hypothetical protein TT 98.7 9.4E-08 3.2E-12 76.4 9.5 68 38-128 36-113 (263)
85 3sso_A Methyltransferase; macr 98.7 6.9E-08 2.4E-12 84.9 9.3 75 40-128 215-297 (419)
86 2ozv_A Hypothetical protein AT 98.7 1.4E-07 4.9E-12 77.0 10.6 80 39-132 34-128 (260)
87 2ift_A Putative methylase HI07 98.7 2.3E-08 8E-13 78.5 5.6 68 41-128 53-134 (201)
88 2pxx_A Uncharacterized protein 98.7 3.6E-08 1.2E-12 76.3 6.6 68 39-128 40-116 (215)
89 3q7e_A Protein arginine N-meth 98.7 1.1E-07 3.7E-12 81.1 10.1 67 40-128 65-142 (349)
90 1dl5_A Protein-L-isoaspartate 98.7 6.9E-08 2.4E-12 81.0 8.6 79 31-130 66-155 (317)
91 2p7i_A Hypothetical protein; p 98.7 4E-08 1.4E-12 77.4 6.8 65 40-128 41-112 (250)
92 2xvm_A Tellurite resistance pr 98.7 7.9E-08 2.7E-12 73.6 8.2 66 40-129 31-107 (199)
93 2yxd_A Probable cobalt-precorr 98.7 3.7E-08 1.3E-12 74.2 6.3 65 40-128 34-109 (183)
94 1wy7_A Hypothetical protein PH 98.7 1.1E-07 3.9E-12 73.8 9.2 67 40-132 48-125 (207)
95 3u81_A Catechol O-methyltransf 98.7 4.4E-08 1.5E-12 77.5 7.0 75 40-128 57-143 (221)
96 3ofk_A Nodulation protein S; N 98.7 3.5E-08 1.2E-12 77.1 6.2 66 39-128 49-123 (216)
97 1yb2_A Hypothetical protein TA 98.7 5.7E-08 1.9E-12 79.7 7.8 69 39-128 108-188 (275)
98 3gu3_A Methyltransferase; alph 98.7 3.6E-08 1.2E-12 81.0 6.6 69 39-128 20-98 (284)
99 1kpg_A CFA synthase;, cyclopro 98.6 9.1E-08 3.1E-12 78.1 8.9 66 39-129 62-139 (287)
100 1jsx_A Glucose-inhibited divis 98.6 4.6E-08 1.6E-12 75.9 6.8 65 41-127 65-140 (207)
101 1zx0_A Guanidinoacetate N-meth 98.6 1.6E-08 5.5E-13 80.7 4.1 68 39-126 58-135 (236)
102 2fpo_A Methylase YHHF; structu 98.6 3.4E-08 1.2E-12 77.6 5.8 67 41-128 54-131 (202)
103 3mq2_A 16S rRNA methyltransfer 98.6 5.1E-08 1.7E-12 76.5 6.8 55 39-106 25-94 (218)
104 3bkw_A MLL3908 protein, S-aden 98.6 1.3E-07 4.6E-12 74.6 9.3 67 40-128 42-116 (243)
105 3dxy_A TRNA (guanine-N(7)-)-me 98.6 5.5E-08 1.9E-12 77.8 7.1 71 40-128 33-114 (218)
106 3e8s_A Putative SAM dependent 98.6 5.2E-08 1.8E-12 75.8 6.8 72 40-130 51-127 (227)
107 1xxl_A YCGJ protein; structura 98.6 3.1E-08 1.1E-12 79.2 5.6 67 39-128 19-96 (239)
108 3jwh_A HEN1; methyltransferase 98.6 4.7E-08 1.6E-12 76.7 6.5 68 40-128 28-111 (217)
109 1ne2_A Hypothetical protein TA 98.6 9E-08 3.1E-12 74.2 8.0 65 40-129 50-120 (200)
110 3ggd_A SAM-dependent methyltra 98.6 1.4E-07 4.7E-12 75.2 9.2 74 38-129 53-134 (245)
111 1m6y_A S-adenosyl-methyltransf 98.6 1E-07 3.5E-12 80.4 8.8 74 40-129 25-108 (301)
112 3hm2_A Precorrin-6Y C5,15-meth 98.6 3.9E-08 1.3E-12 74.2 5.7 70 39-129 23-104 (178)
113 2o57_A Putative sarcosine dime 98.6 1E-07 3.5E-12 78.2 8.5 68 39-128 80-159 (297)
114 2b3t_A Protein methyltransfera 98.6 7.8E-08 2.7E-12 78.8 7.7 68 40-129 108-186 (276)
115 3r3h_A O-methyltransferase, SA 98.6 1E-07 3.6E-12 77.2 8.3 75 40-128 59-145 (242)
116 3cgg_A SAM-dependent methyltra 98.6 5.9E-08 2E-12 73.7 6.4 66 39-127 44-115 (195)
117 2p35_A Trans-aconitate 2-methy 98.6 3.2E-08 1.1E-12 79.1 5.2 67 40-128 32-104 (259)
118 3dr5_A Putative O-methyltransf 98.6 4.5E-08 1.5E-12 78.4 6.0 70 41-128 56-138 (221)
119 3duw_A OMT, O-methyltransferas 98.6 2.8E-08 9.7E-13 78.3 4.7 74 40-128 57-142 (223)
120 2b25_A Hypothetical protein; s 98.6 1.1E-07 3.7E-12 80.1 8.5 72 39-128 103-196 (336)
121 2fyt_A Protein arginine N-meth 98.6 9E-08 3.1E-12 81.4 7.9 68 39-128 62-140 (340)
122 2pwy_A TRNA (adenine-N(1)-)-me 98.6 7.3E-08 2.5E-12 77.1 7.0 69 39-127 94-174 (258)
123 3jwg_A HEN1, methyltransferase 98.6 4.8E-08 1.6E-12 76.6 5.7 68 40-128 28-111 (219)
124 3e23_A Uncharacterized protein 98.6 3.9E-08 1.3E-12 76.7 5.1 71 34-128 36-111 (211)
125 1dus_A MJ0882; hypothetical pr 98.6 1.6E-07 5.3E-12 71.2 8.1 65 40-128 51-128 (194)
126 3tfw_A Putative O-methyltransf 98.6 1.6E-07 5.5E-12 76.0 8.7 71 40-128 62-145 (248)
127 1ve3_A Hypothetical protein PH 98.6 7.9E-08 2.7E-12 75.2 6.6 68 38-128 35-112 (227)
128 3grz_A L11 mtase, ribosomal pr 98.6 9.5E-08 3.2E-12 74.3 6.9 66 39-128 58-134 (205)
129 2vdv_E TRNA (guanine-N(7)-)-me 98.6 8.8E-08 3E-12 77.2 6.8 70 40-127 48-136 (246)
130 1i9g_A Hypothetical protein RV 98.6 8.9E-08 3.1E-12 77.9 6.7 70 39-128 97-180 (280)
131 1p91_A Ribosomal RNA large sub 98.6 6E-08 2.1E-12 78.5 5.5 68 40-128 84-157 (269)
132 3ntv_A MW1564 protein; rossman 98.6 6.6E-08 2.3E-12 77.3 5.7 70 40-128 70-151 (232)
133 3g89_A Ribosomal RNA small sub 98.6 6.8E-08 2.3E-12 78.8 5.9 70 40-127 79-159 (249)
134 1xtp_A LMAJ004091AAA; SGPP, st 98.6 2.6E-07 8.9E-12 73.6 9.1 67 40-128 92-167 (254)
135 3g07_A 7SK snRNA methylphospha 98.6 1.4E-07 4.9E-12 78.1 7.7 35 41-88 46-80 (292)
136 4htf_A S-adenosylmethionine-de 98.6 1.5E-07 5.2E-12 76.8 7.8 68 40-129 67-146 (285)
137 2h00_A Methyltransferase 10 do 98.6 1.6E-07 5.6E-12 75.5 7.8 71 41-130 65-151 (254)
138 3r0q_C Probable protein argini 98.5 6.2E-07 2.1E-11 77.2 11.8 68 39-129 61-139 (376)
139 3m70_A Tellurite resistance pr 98.5 3.1E-07 1.1E-11 75.0 9.5 64 41-129 120-194 (286)
140 2fk8_A Methoxy mycolic acid sy 98.5 1.9E-07 6.5E-12 77.5 8.2 65 40-129 89-165 (318)
141 1inl_A Spermidine synthase; be 98.5 2.8E-07 9.5E-12 77.0 9.2 70 40-129 89-173 (296)
142 3tr6_A O-methyltransferase; ce 98.5 1.5E-07 5.2E-12 74.0 7.1 75 40-128 63-149 (225)
143 2fhp_A Methylase, putative; al 98.5 1.2E-07 4E-12 72.1 6.2 71 40-128 43-125 (187)
144 3tma_A Methyltransferase; thum 98.5 5.9E-07 2E-11 76.3 11.1 71 39-129 201-282 (354)
145 3ccf_A Cyclopropane-fatty-acyl 98.5 1.3E-07 4.6E-12 77.0 6.7 65 40-128 56-126 (279)
146 3pfg_A N-methyltransferase; N, 98.5 8.8E-08 3E-12 77.2 5.5 65 39-127 48-118 (263)
147 2pbf_A Protein-L-isoaspartate 98.5 1.2E-07 4.2E-12 74.7 6.1 79 39-129 78-172 (227)
148 3orh_A Guanidinoacetate N-meth 98.5 7.7E-08 2.6E-12 77.5 4.9 75 40-134 59-143 (236)
149 3p2e_A 16S rRNA methylase; met 98.5 1.3E-07 4.5E-12 75.9 6.1 54 40-106 23-91 (225)
150 1o54_A SAM-dependent O-methylt 98.5 2.1E-07 7.3E-12 76.1 7.5 69 39-128 110-190 (277)
151 2yxe_A Protein-L-isoaspartate 98.5 1.9E-07 6.4E-12 73.0 6.8 71 39-129 75-156 (215)
152 3k6r_A Putative transferase PH 98.5 1.1E-07 3.7E-12 79.5 5.5 71 38-131 122-204 (278)
153 1g6q_1 HnRNP arginine N-methyl 98.5 2.5E-07 8.5E-12 78.2 7.8 67 40-128 37-114 (328)
154 4hc4_A Protein arginine N-meth 98.5 2.9E-07 9.9E-12 80.0 8.3 65 41-128 83-158 (376)
155 4dcm_A Ribosomal RNA large sub 98.5 1.9E-07 6.4E-12 80.8 7.0 69 40-130 221-303 (375)
156 1wzn_A SAM-dependent methyltra 98.5 4.2E-07 1.4E-11 72.5 8.6 64 40-127 40-113 (252)
157 2ih2_A Modification methylase 98.5 6.4E-07 2.2E-11 77.0 10.0 72 40-132 38-111 (421)
158 3ckk_A TRNA (guanine-N(7)-)-me 98.5 1.7E-07 5.9E-12 75.7 6.1 70 39-127 44-131 (235)
159 3adn_A Spermidine synthase; am 98.5 3.2E-07 1.1E-11 76.9 7.9 71 40-130 82-168 (294)
160 3sm3_A SAM-dependent methyltra 98.5 2.6E-07 9E-12 72.3 6.9 67 39-128 28-110 (235)
161 2ex4_A Adrenal gland protein A 98.5 9E-08 3.1E-12 76.3 4.3 66 41-128 79-155 (241)
162 3bxo_A N,N-dimethyltransferase 98.5 2.4E-07 8.3E-12 72.9 6.7 63 40-126 39-107 (239)
163 1vbf_A 231AA long hypothetical 98.5 2.6E-07 9E-12 72.9 6.9 68 39-129 68-144 (231)
164 1ws6_A Methyltransferase; stru 98.5 2.6E-07 8.9E-12 69.0 6.3 71 40-130 40-121 (171)
165 2y1w_A Histone-arginine methyl 98.5 5.8E-07 2E-11 76.5 9.1 66 40-128 49-125 (348)
166 2h1r_A Dimethyladenosine trans 98.5 1.2E-07 4.3E-12 79.3 4.8 65 40-129 41-116 (299)
167 2p8j_A S-adenosylmethionine-de 98.5 1.7E-07 5.9E-12 72.5 5.3 68 39-128 21-98 (209)
168 3gjy_A Spermidine synthase; AP 98.5 7.4E-07 2.5E-11 75.8 9.6 112 43-173 91-227 (317)
169 2zfu_A Nucleomethylin, cerebra 98.5 2.4E-07 8.3E-12 72.3 6.1 60 40-129 66-125 (215)
170 4azs_A Methyltransferase WBDD; 98.5 2.2E-07 7.4E-12 84.2 6.6 68 39-127 64-142 (569)
171 2kw5_A SLR1183 protein; struct 98.4 1.5E-07 5.3E-12 72.7 4.8 64 39-126 28-101 (202)
172 3dmg_A Probable ribosomal RNA 98.4 4.6E-07 1.6E-11 78.6 7.8 72 40-134 232-313 (381)
173 1zq9_A Probable dimethyladenos 98.4 4.4E-07 1.5E-11 75.4 7.4 66 40-130 27-104 (285)
174 3i9f_A Putative type 11 methyl 98.4 8.6E-08 2.9E-12 72.1 2.8 65 39-129 15-85 (170)
175 3ocj_A Putative exported prote 98.4 1.1E-07 3.9E-12 78.7 3.7 69 39-128 116-196 (305)
176 3uwp_A Histone-lysine N-methyl 98.4 9.5E-07 3.3E-11 78.0 9.7 77 32-128 165-261 (438)
177 1nv8_A HEMK protein; class I a 98.4 5.4E-07 1.9E-11 74.8 7.7 64 41-128 123-201 (284)
178 1r18_A Protein-L-isoaspartate( 98.4 1.9E-07 6.4E-12 74.0 4.6 76 39-129 82-173 (227)
179 3gnl_A Uncharacterized protein 98.4 3.1E-07 1.1E-11 75.5 6.1 70 35-125 15-96 (244)
180 3lcc_A Putative methyl chlorid 98.4 2.1E-07 7.1E-12 73.8 4.8 65 41-129 66-142 (235)
181 3lec_A NADB-rossmann superfami 98.4 2.6E-07 8.8E-12 75.4 5.4 70 35-125 15-96 (230)
182 3tm4_A TRNA (guanine N2-)-meth 98.4 2.6E-07 8.9E-12 79.5 5.7 70 39-129 215-296 (373)
183 4dmg_A Putative uncharacterize 98.4 9.4E-07 3.2E-11 77.0 9.2 69 38-129 211-290 (393)
184 1l3i_A Precorrin-6Y methyltran 98.4 4.1E-07 1.4E-11 68.8 5.9 66 39-128 31-109 (192)
185 1fp1_D Isoliquiritigenin 2'-O- 98.4 1.2E-06 4.1E-11 74.7 9.4 75 30-128 198-276 (372)
186 1qam_A ERMC' methyltransferase 98.4 6.8E-07 2.3E-11 72.5 7.5 66 40-129 29-104 (244)
187 3kr9_A SAM-dependent methyltra 98.4 5E-07 1.7E-11 73.4 6.5 69 36-126 10-91 (225)
188 3fut_A Dimethyladenosine trans 98.4 7.4E-07 2.5E-11 74.1 7.6 69 40-131 46-122 (271)
189 2gs9_A Hypothetical protein TT 98.4 2.6E-07 9E-12 71.8 4.7 65 39-128 34-104 (211)
190 1jg1_A PIMT;, protein-L-isoasp 98.4 5.6E-07 1.9E-11 71.7 6.6 69 39-129 89-168 (235)
191 2yvl_A TRMI protein, hypotheti 98.4 8.9E-07 3E-11 70.3 7.8 66 40-128 90-167 (248)
192 1yub_A Ermam, rRNA methyltrans 98.4 2.8E-07 9.5E-12 74.5 4.8 69 40-132 28-106 (245)
193 2gpy_A O-methyltransferase; st 98.4 3.8E-07 1.3E-11 72.4 5.6 72 40-129 53-136 (233)
194 2b78_A Hypothetical protein SM 98.4 9E-07 3.1E-11 76.6 8.2 72 40-129 211-295 (385)
195 2nxc_A L11 mtase, ribosomal pr 98.4 7.1E-07 2.4E-11 72.6 7.2 65 39-128 118-193 (254)
196 2avd_A Catechol-O-methyltransf 98.4 4.6E-07 1.6E-11 71.4 5.9 75 40-128 68-154 (229)
197 2igt_A SAM dependent methyltra 98.4 3.6E-07 1.2E-11 77.8 5.5 70 40-128 152-234 (332)
198 3tqs_A Ribosomal RNA small sub 98.4 4E-07 1.4E-11 75.0 5.4 103 40-172 28-163 (255)
199 1uwv_A 23S rRNA (uracil-5-)-me 98.3 6.1E-07 2.1E-11 78.7 6.7 70 40-128 285-365 (433)
200 3c0k_A UPF0064 protein YCCW; P 98.3 8.7E-07 3E-11 76.6 7.6 72 40-129 219-303 (396)
201 3c3y_A Pfomt, O-methyltransfer 98.3 7.8E-07 2.7E-11 71.6 6.8 75 40-128 69-156 (237)
202 3iv6_A Putative Zn-dependent a 98.3 3.6E-07 1.2E-11 75.7 4.9 71 39-128 43-119 (261)
203 1sui_A Caffeoyl-COA O-methyltr 98.3 7E-07 2.4E-11 72.5 6.4 75 40-128 78-165 (247)
204 3v97_A Ribosomal RNA large sub 98.3 1.3E-06 4.6E-11 81.2 9.1 70 40-130 538-620 (703)
205 2qe6_A Uncharacterized protein 98.3 1.8E-06 6E-11 71.3 8.8 75 41-128 77-166 (274)
206 2vdw_A Vaccinia virus capping 98.3 5.4E-07 1.9E-11 75.5 5.7 75 40-128 47-138 (302)
207 2hnk_A SAM-dependent O-methylt 98.3 1.1E-06 3.7E-11 70.2 6.9 75 40-128 59-156 (239)
208 1wxx_A TT1595, hypothetical pr 98.3 9.5E-07 3.3E-11 76.0 7.0 70 41-129 209-289 (382)
209 3d2l_A SAM-dependent methyltra 98.3 7.7E-07 2.6E-11 70.2 5.5 64 39-127 31-104 (243)
210 3cc8_A Putative methyltransfer 98.3 6.5E-07 2.2E-11 69.7 4.9 68 40-128 31-102 (230)
211 2i7c_A Spermidine synthase; tr 98.3 1.2E-06 4.2E-11 72.6 6.8 69 40-128 77-160 (283)
212 1xj5_A Spermidine synthase 1; 98.3 1.5E-06 5.2E-11 74.1 7.5 70 40-128 119-203 (334)
213 1y8c_A S-adenosylmethionine-de 98.3 7.9E-07 2.7E-11 70.0 5.4 64 40-127 36-109 (246)
214 2avn_A Ubiquinone/menaquinone 98.3 8E-07 2.7E-11 71.8 5.5 64 40-127 53-122 (260)
215 3c3p_A Methyltransferase; NP_9 98.3 6E-07 2.1E-11 70.1 4.5 69 40-128 55-135 (210)
216 2pt6_A Spermidine synthase; tr 98.3 1.4E-06 4.6E-11 73.8 6.9 69 40-128 115-198 (321)
217 3bwc_A Spermidine synthase; SA 98.3 7.6E-07 2.6E-11 74.6 5.3 71 40-129 94-179 (304)
218 3thr_A Glycine N-methyltransfe 98.3 8.8E-07 3E-11 72.3 5.5 68 40-127 56-138 (293)
219 3g2m_A PCZA361.24; SAM-depende 98.3 9.3E-07 3.2E-11 72.8 5.5 62 41-126 82-157 (299)
220 3htx_A HEN1; HEN1, small RNA m 98.3 6.3E-07 2.2E-11 85.0 5.0 69 40-128 720-805 (950)
221 2as0_A Hypothetical protein PH 98.2 7.2E-07 2.5E-11 77.0 4.8 73 39-129 215-299 (396)
222 2r6z_A UPF0341 protein in RSP 98.2 2.9E-07 9.9E-12 75.8 1.9 69 40-129 82-171 (258)
223 3mcz_A O-methyltransferase; ad 98.2 3E-06 1E-10 71.3 8.2 78 31-128 169-257 (352)
224 3bgv_A MRNA CAP guanine-N7 met 98.2 1.2E-06 4.1E-11 72.7 5.4 71 40-128 33-123 (313)
225 2r3s_A Uncharacterized protein 98.2 3.2E-06 1.1E-10 70.3 8.1 76 31-128 154-241 (335)
226 1o9g_A RRNA methyltransferase; 98.2 8.2E-07 2.8E-11 71.4 4.1 35 41-88 51-87 (250)
227 1fp2_A Isoflavone O-methyltran 98.2 2.9E-06 9.9E-11 71.7 7.5 65 39-128 186-255 (352)
228 3b3j_A Histone-arginine methyl 98.2 2.2E-06 7.4E-11 76.5 6.9 66 40-128 157-233 (480)
229 1qzz_A RDMB, aclacinomycin-10- 98.2 6.8E-06 2.3E-10 69.5 9.5 66 39-128 180-257 (374)
230 3ll7_A Putative methyltransfer 98.2 7.3E-07 2.5E-11 78.4 3.4 73 38-131 90-175 (410)
231 2aot_A HMT, histamine N-methyl 98.2 3.1E-06 1.1E-10 69.5 7.0 78 40-128 51-144 (292)
232 1iy9_A Spermidine synthase; ro 98.2 5.1E-06 1.7E-10 68.6 8.2 70 40-129 74-158 (275)
233 1mjf_A Spermidine synthase; sp 98.2 1.8E-06 6.2E-11 71.4 5.5 68 40-129 74-162 (281)
234 2qm3_A Predicted methyltransfe 98.2 3.3E-06 1.1E-10 72.4 7.2 69 40-129 171-251 (373)
235 2yx1_A Hypothetical protein MJ 98.2 2.3E-06 7.7E-11 72.6 5.8 64 39-129 193-268 (336)
236 1wg8_A Predicted S-adenosylmet 98.2 7.6E-06 2.6E-10 68.7 8.9 83 30-131 12-101 (285)
237 2jjq_A Uncharacterized RNA met 98.1 4.1E-06 1.4E-10 73.6 7.6 64 39-128 288-362 (425)
238 1uir_A Polyamine aminopropyltr 98.1 1.9E-06 6.4E-11 72.5 5.2 70 40-129 76-161 (314)
239 2o07_A Spermidine synthase; st 98.1 1.9E-06 6.4E-11 72.4 5.1 69 40-128 94-177 (304)
240 3cbg_A O-methyltransferase; cy 98.1 2E-06 6.9E-11 68.7 5.1 73 40-128 71-157 (232)
241 3reo_A (ISO)eugenol O-methyltr 98.1 8.1E-06 2.8E-10 69.8 8.7 53 39-104 201-257 (368)
242 3bt7_A TRNA (uracil-5-)-methyl 98.1 2.8E-06 9.5E-11 72.8 5.8 70 42-128 214-304 (369)
243 2i62_A Nicotinamide N-methyltr 98.1 8.4E-07 2.9E-11 70.9 2.2 71 40-128 55-166 (265)
244 1x19_A CRTF-related protein; m 98.1 1.2E-05 4.1E-10 68.0 9.4 71 32-127 182-264 (359)
245 2pjd_A Ribosomal RNA small sub 98.1 1.6E-06 5.6E-11 73.4 4.0 67 40-129 195-271 (343)
246 2b2c_A Spermidine synthase; be 98.1 4.7E-06 1.6E-10 70.4 6.7 69 40-128 107-190 (314)
247 3p9c_A Caffeic acid O-methyltr 98.1 1.4E-05 4.8E-10 68.2 9.7 70 34-127 194-267 (364)
248 3bzb_A Uncharacterized protein 98.1 1.1E-05 3.7E-10 66.5 8.7 88 24-127 62-172 (281)
249 3fzg_A 16S rRNA methylase; met 98.1 1.8E-06 6.2E-11 69.0 3.6 65 38-126 46-122 (200)
250 1qyr_A KSGA, high level kasuga 98.1 6E-06 2E-10 67.7 6.8 74 40-131 20-102 (252)
251 3lst_A CALO1 methyltransferase 98.1 5.7E-06 1.9E-10 69.9 6.9 71 32-127 176-255 (348)
252 1tw3_A COMT, carminomycin 4-O- 98.1 2.2E-05 7.4E-10 66.1 10.2 66 39-128 181-258 (360)
253 2f8l_A Hypothetical protein LM 98.0 3.9E-06 1.3E-10 71.0 5.1 72 40-129 129-211 (344)
254 2a14_A Indolethylamine N-methy 98.0 3.7E-07 1.3E-11 74.3 -1.3 35 40-88 54-88 (263)
255 2ip2_A Probable phenazine-spec 98.0 3.3E-05 1.1E-09 64.3 10.7 69 33-127 161-241 (334)
256 1zg3_A Isoflavanone 4'-O-methy 98.0 5.2E-06 1.8E-10 70.3 5.8 66 39-128 191-260 (358)
257 2k4m_A TR8_protein, UPF0146 pr 98.0 9.9E-06 3.4E-10 62.0 6.5 81 19-125 12-95 (153)
258 2dul_A N(2),N(2)-dimethylguano 98.0 5.4E-06 1.8E-10 71.8 5.7 67 41-127 47-139 (378)
259 3gwz_A MMCR; methyltransferase 98.0 1.6E-05 5.4E-10 67.8 8.5 70 34-128 196-277 (369)
260 3ftd_A Dimethyladenosine trans 98.0 3.6E-06 1.2E-10 68.8 4.2 70 40-130 30-106 (249)
261 3i53_A O-methyltransferase; CO 98.0 8.9E-06 3.1E-10 68.0 6.8 64 40-127 168-243 (332)
262 3axs_A Probable N(2),N(2)-dime 98.0 3.8E-06 1.3E-10 73.3 4.6 69 40-127 51-133 (392)
263 3uzu_A Ribosomal RNA small sub 98.0 7.6E-06 2.6E-10 68.1 5.8 108 40-172 41-181 (279)
264 3dp7_A SAM-dependent methyltra 98.0 8.4E-06 2.9E-10 69.4 6.1 67 40-127 178-256 (363)
265 2oyr_A UPF0341 protein YHIQ; a 98.0 5.2E-06 1.8E-10 68.6 4.1 69 40-130 85-175 (258)
266 2g72_A Phenylethanolamine N-me 97.9 3.6E-06 1.2E-10 68.9 2.1 34 41-88 71-104 (289)
267 3ldu_A Putative methylase; str 97.9 3E-05 1E-09 67.1 7.4 81 40-129 194-311 (385)
268 2hwk_A Helicase NSP2; rossman 97.8 2.9E-05 1E-09 65.2 6.7 84 78-173 164-280 (320)
269 4e2x_A TCAB9; kijanose, tetron 97.8 3.6E-06 1.2E-10 72.6 1.1 71 40-128 106-180 (416)
270 3k0b_A Predicted N6-adenine-sp 97.8 2.9E-05 9.9E-10 67.5 6.8 81 40-129 200-317 (393)
271 3tka_A Ribosomal RNA small sub 97.8 4.3E-05 1.5E-09 65.6 7.5 87 29-131 46-140 (347)
272 2qfm_A Spermine synthase; sper 97.8 6.2E-05 2.1E-09 65.1 8.2 70 41-128 188-276 (364)
273 1vlm_A SAM-dependent methyltra 97.8 9.1E-06 3.1E-10 63.7 2.5 61 41-128 47-111 (219)
274 3ldg_A Putative uncharacterize 97.7 5.2E-05 1.8E-09 65.8 6.9 81 40-129 193-310 (384)
275 2okc_A Type I restriction enzy 97.7 3.2E-05 1.1E-09 67.8 5.2 82 40-131 170-265 (445)
276 2cmg_A Spermidine synthase; tr 97.7 5.3E-05 1.8E-09 62.2 6.0 62 40-127 71-147 (262)
277 3giw_A Protein of unknown func 97.6 0.00014 4.9E-09 60.7 7.8 53 42-106 79-144 (277)
278 1af7_A Chemotaxis receptor met 97.6 7.3E-05 2.5E-09 62.0 5.6 39 41-88 105-147 (274)
279 1u2z_A Histone-lysine N-methyl 97.6 9.9E-05 3.4E-09 65.2 6.3 71 39-127 240-331 (433)
280 3frh_A 16S rRNA methylase; met 97.6 0.00013 4.4E-09 60.2 6.4 63 40-127 104-176 (253)
281 2ar0_A M.ecoki, type I restric 97.5 0.00012 4.2E-09 66.0 6.7 85 40-131 168-273 (541)
282 4a6d_A Hydroxyindole O-methylt 97.5 0.00011 3.7E-09 62.5 5.8 64 40-126 178-251 (353)
283 3lcv_B Sisomicin-gentamicin re 97.4 4.8E-05 1.6E-09 63.5 2.2 69 38-128 129-207 (281)
284 4gqb_A Protein arginine N-meth 97.2 0.00022 7.6E-09 65.8 4.6 69 42-128 358-437 (637)
285 3lkd_A Type I restriction-modi 97.2 0.00056 1.9E-08 61.8 6.5 76 40-130 220-308 (542)
286 3ua3_A Protein arginine N-meth 97.1 0.0002 6.7E-09 66.9 2.8 84 42-128 410-504 (745)
287 3g7u_A Cytosine-specific methy 97.0 0.0013 4.4E-08 56.8 6.6 72 43-129 3-81 (376)
288 1i4w_A Mitochondrial replicati 97.0 0.0024 8.2E-08 54.9 8.1 58 41-111 58-123 (353)
289 3v97_A Ribosomal RNA large sub 96.9 0.0024 8.3E-08 59.3 8.2 84 40-129 189-313 (703)
290 3s1s_A Restriction endonucleas 96.6 0.0026 9E-08 60.3 6.0 74 40-130 320-410 (878)
291 3cvo_A Methyltransferase-like 96.3 0.0065 2.2E-07 48.2 5.8 73 40-128 29-131 (202)
292 2qy6_A UPF0209 protein YFCK; s 96.2 0.016 5.6E-07 47.3 8.1 42 40-88 59-106 (257)
293 1g55_A DNA cytosine methyltran 96.1 0.0037 1.3E-07 53.1 3.6 70 43-129 3-78 (343)
294 3khk_A Type I restriction-modi 96.1 0.0039 1.3E-07 56.3 3.9 81 44-131 247-341 (544)
295 3ufb_A Type I restriction-modi 96.0 0.0069 2.4E-07 54.4 5.0 88 40-131 216-314 (530)
296 3o4f_A Spermidine synthase; am 95.9 0.02 6.9E-07 48.0 7.3 112 40-171 82-224 (294)
297 2zig_A TTHA0409, putative modi 95.7 0.011 3.9E-07 48.7 5.0 35 40-89 234-268 (297)
298 2wk1_A NOVP; transferase, O-me 95.5 0.051 1.7E-06 45.1 8.2 74 41-128 106-218 (282)
299 3dqp_A Oxidoreductase YLBE; al 95.5 0.2 6.8E-06 38.4 11.1 89 44-149 2-93 (219)
300 2qrv_A DNA (cytosine-5)-methyl 94.9 0.045 1.5E-06 45.6 6.2 73 41-130 15-94 (295)
301 4h0n_A DNMT2; SAH binding, tra 94.7 0.025 8.5E-07 47.9 4.0 70 44-130 5-80 (333)
302 2py6_A Methyltransferase FKBM; 94.5 0.042 1.4E-06 47.6 5.2 38 40-89 225-263 (409)
303 4e4y_A Short chain dehydrogena 94.3 0.55 1.9E-05 36.7 10.9 80 41-131 3-82 (244)
304 3ubt_Y Modification methylase 94.1 0.11 3.8E-06 42.9 6.8 64 43-128 1-70 (331)
305 2ld4_A Anamorsin; methyltransf 93.8 0.048 1.6E-06 40.5 3.7 61 39-128 10-72 (176)
306 2c7p_A Modification methylase 93.8 0.045 1.5E-06 46.1 3.8 66 42-130 11-82 (327)
307 3qv2_A 5-cytosine DNA methyltr 93.6 0.031 1.1E-06 47.2 2.5 72 41-130 9-87 (327)
308 3mag_A VP39; methylated adenin 93.2 1.2 4E-05 37.5 11.3 83 41-134 60-146 (307)
309 4id9_A Short-chain dehydrogena 92.9 0.36 1.2E-05 39.3 7.9 72 41-131 18-89 (347)
310 3c6k_A Spermine synthase; sper 92.7 0.76 2.6E-05 39.7 9.9 71 40-128 204-293 (381)
311 3me5_A Cytosine-specific methy 92.4 0.19 6.4E-06 44.8 5.9 71 43-129 89-179 (482)
312 3vtz_A Glucose 1-dehydrogenase 92.4 0.63 2.2E-05 37.2 8.6 80 40-131 12-93 (269)
313 1g60_A Adenine-specific methyl 92.1 0.13 4.4E-06 41.4 4.1 34 40-88 211-244 (260)
314 1vpt_A VP39; RNA CAP, poly(A) 92.1 2.4 8.2E-05 36.0 11.9 77 41-129 75-156 (348)
315 3b5i_A S-adenosyl-L-methionine 92.0 0.42 1.4E-05 41.1 7.3 82 42-128 53-159 (374)
316 3dhn_A NAD-dependent epimerase 91.7 1 3.5E-05 34.3 8.7 71 43-130 5-78 (227)
317 2dph_A Formaldehyde dismutase; 91.6 0.19 6.3E-06 42.8 4.7 73 39-126 183-261 (398)
318 3sxp_A ADP-L-glycero-D-mannohe 91.5 1.2 4.1E-05 36.6 9.4 76 41-130 9-101 (362)
319 1dhr_A Dihydropteridine reduct 91.2 1.6 5.5E-05 33.9 9.5 79 40-130 5-87 (241)
320 3gpi_A NAD-dependent epimerase 91.1 0.45 1.5E-05 37.8 6.3 71 42-129 3-73 (286)
321 2pzm_A Putative nucleotide sug 90.9 1.3 4.5E-05 35.9 9.0 75 42-131 20-100 (330)
322 3rft_A Uronate dehydrogenase; 90.7 1.2 4.1E-05 35.2 8.5 71 43-130 4-75 (267)
323 4b79_A PA4098, probable short- 90.5 5.4 0.00018 32.0 12.2 75 41-129 10-88 (242)
324 3enk_A UDP-glucose 4-epimerase 90.4 1.6 5.6E-05 35.2 9.2 75 41-130 4-89 (341)
325 2efj_A 3,7-dimethylxanthine me 90.3 0.6 2E-05 40.3 6.7 80 42-128 53-158 (384)
326 2fwm_X 2,3-dihydro-2,3-dihydro 90.0 2.3 7.9E-05 33.2 9.5 79 41-131 6-86 (250)
327 2z1m_A GDP-D-mannose dehydrata 89.6 1.4 4.9E-05 35.4 8.2 74 42-130 3-86 (345)
328 1rkx_A CDP-glucose-4,6-dehydra 89.5 1.6 5.6E-05 35.5 8.6 73 42-129 9-90 (357)
329 3un1_A Probable oxidoreductase 89.5 2.1 7.2E-05 33.9 9.0 79 41-131 27-108 (260)
330 3rd5_A Mypaa.01249.C; ssgcid, 89.4 2.9 0.0001 33.4 9.9 76 41-130 15-97 (291)
331 2v6g_A Progesterone 5-beta-red 89.4 2.2 7.6E-05 34.6 9.3 74 43-130 2-83 (364)
332 1hdo_A Biliverdin IX beta redu 89.4 5 0.00017 29.5 10.9 71 43-130 4-78 (206)
333 2pk3_A GDP-6-deoxy-D-LYXO-4-he 89.4 1.5 5.2E-05 35.0 8.2 77 39-130 9-85 (321)
334 3d7l_A LIN1944 protein; APC893 89.0 4 0.00014 30.3 9.8 65 44-130 5-69 (202)
335 1ooe_A Dihydropteridine reduct 88.9 1.8 6E-05 33.5 7.9 77 42-130 3-83 (236)
336 1db3_A GDP-mannose 4,6-dehydra 88.5 4.4 0.00015 33.0 10.5 73 43-130 2-89 (372)
337 2dtx_A Glucose 1-dehydrogenase 88.3 3 0.0001 33.0 9.1 78 41-131 7-86 (264)
338 3abi_A Putative uncharacterize 88.1 2.2 7.5E-05 35.7 8.6 70 41-129 15-87 (365)
339 1rpn_A GDP-mannose 4,6-dehydra 88.1 2 6.9E-05 34.5 8.1 75 40-129 12-96 (335)
340 4egb_A DTDP-glucose 4,6-dehydr 87.9 2.4 8.1E-05 34.4 8.4 78 41-131 23-110 (346)
341 3dii_A Short-chain dehydrogena 87.6 2 6.8E-05 33.6 7.5 78 42-131 2-87 (247)
342 3tos_A CALS11; methyltransfera 87.5 3.8 0.00013 33.3 9.4 76 42-128 70-191 (257)
343 3d3w_A L-xylulose reductase; u 87.5 3.1 0.0001 32.0 8.5 76 41-130 6-87 (244)
344 2hrz_A AGR_C_4963P, nucleoside 87.4 1.9 6.7E-05 34.8 7.6 73 41-129 13-96 (342)
345 1yo6_A Putative carbonyl reduc 87.3 3.7 0.00013 31.3 8.8 77 42-130 3-92 (250)
346 3llv_A Exopolyphosphatase-rela 87.1 0.62 2.1E-05 33.2 3.9 69 42-127 6-78 (141)
347 1cyd_A Carbonyl reductase; sho 87.1 3.6 0.00012 31.5 8.7 76 41-130 6-87 (244)
348 2ag5_A DHRS6, dehydrogenase/re 87.1 4.5 0.00015 31.3 9.3 76 42-131 6-86 (246)
349 3m2p_A UDP-N-acetylglucosamine 86.9 8.2 0.00028 30.7 11.0 73 43-133 3-76 (311)
350 3o38_A Short chain dehydrogena 86.9 3.8 0.00013 32.0 8.9 79 41-131 21-113 (266)
351 1sb8_A WBPP; epimerase, 4-epim 86.8 2.8 9.7E-05 34.1 8.3 71 42-129 27-112 (352)
352 1kol_A Formaldehyde dehydrogen 86.6 0.65 2.2E-05 39.2 4.4 74 39-127 183-262 (398)
353 1uay_A Type II 3-hydroxyacyl-C 86.4 2 6.8E-05 32.8 6.8 75 42-130 2-77 (242)
354 2c07_A 3-oxoacyl-(acyl-carrier 86.4 4 0.00014 32.5 8.8 78 42-131 44-133 (285)
355 2h7i_A Enoyl-[acyl-carrier-pro 86.2 0.7 2.4E-05 36.7 4.2 79 41-130 6-98 (269)
356 3ruf_A WBGU; rossmann fold, UD 86.1 2.9 9.9E-05 33.9 8.0 72 41-129 24-110 (351)
357 3sc4_A Short chain dehydrogena 86.1 5.8 0.0002 31.6 9.8 79 41-131 8-105 (285)
358 1f8f_A Benzyl alcohol dehydrog 86.0 0.61 2.1E-05 39.0 3.9 73 39-126 188-265 (371)
359 1m6e_X S-adenosyl-L-methionnin 85.9 0.42 1.4E-05 40.9 2.8 77 42-128 52-148 (359)
360 2c5a_A GDP-mannose-3', 5'-epim 85.8 4 0.00014 33.8 8.9 73 41-130 28-104 (379)
361 3qvo_A NMRA family protein; st 85.7 5.4 0.00019 30.6 9.1 69 43-128 24-97 (236)
362 3fpc_A NADP-dependent alcohol 85.6 0.75 2.6E-05 38.2 4.2 73 39-125 164-241 (352)
363 3p19_A BFPVVD8, putative blue 85.1 4.1 0.00014 32.3 8.3 79 42-132 16-100 (266)
364 2q1w_A Putative nucleotide sug 85.1 3.9 0.00013 33.1 8.3 75 42-131 21-101 (333)
365 3swr_A DNA (cytosine-5)-methyl 85.0 0.56 1.9E-05 45.3 3.5 75 42-129 540-628 (1002)
366 2x4g_A Nucleoside-diphosphate- 84.9 2.1 7.2E-05 34.4 6.6 71 42-129 13-87 (342)
367 3r1i_A Short-chain type dehydr 84.9 4.4 0.00015 32.3 8.4 79 41-131 31-121 (276)
368 3h7a_A Short chain dehydrogena 84.9 3.8 0.00013 32.1 7.9 79 41-131 6-95 (252)
369 3ic5_A Putative saccharopine d 84.8 1.4 4.7E-05 29.7 4.7 70 42-128 5-78 (118)
370 2pd4_A Enoyl-[acyl-carrier-pro 84.7 1.7 5.9E-05 34.5 5.9 79 41-130 5-95 (275)
371 3ek2_A Enoyl-(acyl-carrier-pro 84.6 1.1 3.8E-05 35.1 4.6 81 40-131 12-104 (271)
372 3e03_A Short chain dehydrogena 84.6 5.7 0.0002 31.4 9.0 78 41-130 5-101 (274)
373 1qsg_A Enoyl-[acyl-carrier-pro 84.6 1.6 5.4E-05 34.5 5.5 78 41-129 8-97 (265)
374 3kvo_A Hydroxysteroid dehydrog 84.5 6.8 0.00023 32.6 9.7 77 42-130 45-140 (346)
375 1i24_A Sulfolipid biosynthesis 84.3 1.9 6.3E-05 35.7 6.1 78 37-129 6-110 (404)
376 2bka_A CC3, TAT-interacting pr 84.1 3.3 0.00011 31.6 7.1 71 42-129 18-94 (242)
377 2p91_A Enoyl-[acyl-carrier-pro 84.0 1.1 3.8E-05 35.8 4.5 79 41-130 20-110 (285)
378 3uko_A Alcohol dehydrogenase c 83.9 3 0.0001 34.9 7.2 72 39-125 191-269 (378)
379 3pxx_A Carveol dehydrogenase; 83.9 7 0.00024 30.7 9.2 81 41-133 9-113 (287)
380 2nm0_A Probable 3-oxacyl-(acyl 83.9 9.3 0.00032 29.9 9.8 76 42-130 21-98 (253)
381 1sny_A Sniffer CG10964-PA; alp 83.7 9.2 0.00032 29.6 9.7 78 41-130 20-113 (267)
382 4eez_A Alcohol dehydrogenase 1 83.7 1.2 4E-05 36.6 4.6 75 39-127 161-240 (348)
383 2rh8_A Anthocyanidin reductase 83.5 9.1 0.00031 30.7 9.8 72 42-130 9-91 (338)
384 3tpc_A Short chain alcohol deh 83.3 3.4 0.00011 32.3 7.0 79 41-131 6-93 (257)
385 3s55_A Putative short-chain de 83.2 9 0.00031 30.2 9.6 79 41-131 9-111 (281)
386 3gdg_A Probable NADP-dependent 83.2 2.7 9.1E-05 32.9 6.3 80 41-131 19-113 (267)
387 1pqw_A Polyketide synthase; ro 83.2 1.6 5.5E-05 32.7 4.9 74 39-127 36-115 (198)
388 3slg_A PBGP3 protein; structur 83.2 7.9 0.00027 31.5 9.5 72 42-129 24-101 (372)
389 3afn_B Carbonyl reductase; alp 82.7 5.3 0.00018 30.7 7.8 77 41-129 6-95 (258)
390 4h15_A Short chain alcohol deh 82.7 4 0.00014 32.8 7.3 76 41-128 10-87 (261)
391 2q1s_A Putative nucleotide sug 82.6 4.3 0.00015 33.5 7.6 72 41-129 31-109 (377)
392 3tjr_A Short chain dehydrogena 82.5 3.8 0.00013 33.1 7.2 79 41-131 30-120 (301)
393 3lf2_A Short chain oxidoreduct 82.5 5.4 0.00019 31.3 8.0 78 41-130 7-98 (265)
394 1pl8_A Human sorbitol dehydrog 82.2 1.2 4.2E-05 36.9 4.2 73 39-126 169-249 (356)
395 2o23_A HADH2 protein; HSD17B10 82.1 4.2 0.00014 31.5 7.1 78 41-130 11-97 (265)
396 3imf_A Short chain dehydrogena 81.8 6.3 0.00022 30.8 8.1 77 42-130 6-94 (257)
397 2oo3_A Protein involved in cat 81.8 2.5 8.6E-05 35.0 5.8 69 42-129 92-169 (283)
398 3ew7_A LMO0794 protein; Q8Y8U8 81.8 6.3 0.00022 29.3 7.8 68 44-130 2-72 (221)
399 3lyl_A 3-oxoacyl-(acyl-carrier 81.8 7.3 0.00025 29.9 8.4 78 42-131 5-94 (247)
400 3m6i_A L-arabinitol 4-dehydrog 81.8 2.7 9.3E-05 34.8 6.1 75 39-126 177-259 (363)
401 1e3j_A NADP(H)-dependent ketos 81.7 1.1 3.7E-05 37.2 3.6 74 39-127 166-248 (352)
402 3uog_A Alcohol dehydrogenase; 81.7 1.1 3.7E-05 37.4 3.6 73 39-126 187-264 (363)
403 3ioy_A Short-chain dehydrogena 81.7 11 0.00037 30.7 9.7 80 41-132 7-100 (319)
404 3sju_A Keto reductase; short-c 81.7 5.4 0.00018 31.7 7.7 80 40-131 22-113 (279)
405 1n7h_A GDP-D-mannose-4,6-dehyd 81.6 7.3 0.00025 32.0 8.7 72 43-129 29-116 (381)
406 1orr_A CDP-tyvelose-2-epimeras 81.6 6.1 0.00021 31.6 8.1 71 44-129 3-83 (347)
407 1h5q_A NADP-dependent mannitol 81.5 7.1 0.00024 30.1 8.2 78 42-131 14-104 (265)
408 3awd_A GOX2181, putative polyo 81.5 4.4 0.00015 31.3 7.0 78 41-130 12-101 (260)
409 2ew8_A (S)-1-phenylethanol deh 81.4 6.8 0.00023 30.4 8.1 79 41-131 6-94 (249)
410 1t2a_A GDP-mannose 4,6 dehydra 81.3 6.5 0.00022 32.2 8.3 72 43-129 25-112 (375)
411 3jv7_A ADH-A; dehydrogenase, n 81.3 1.2 4.1E-05 36.7 3.7 73 38-125 168-245 (345)
412 3pk0_A Short-chain dehydrogena 81.2 5.5 0.00019 31.3 7.5 79 41-131 9-100 (262)
413 1jtv_A 17 beta-hydroxysteroid 81.1 7.7 0.00026 31.8 8.6 78 42-131 2-95 (327)
414 3qiv_A Short-chain dehydrogena 81.0 1.9 6.6E-05 33.5 4.7 77 41-129 8-96 (253)
415 1yb1_A 17-beta-hydroxysteroid 81.0 5.3 0.00018 31.5 7.4 79 41-131 30-120 (272)
416 1yxm_A Pecra, peroxisomal tran 81.0 5.2 0.00018 31.8 7.4 77 42-130 18-111 (303)
417 1gy8_A UDP-galactose 4-epimera 81.0 10 0.00035 31.1 9.5 75 42-130 2-104 (397)
418 2cfc_A 2-(R)-hydroxypropyl-COM 81.0 6.8 0.00023 30.0 7.9 77 42-130 2-91 (250)
419 4imr_A 3-oxoacyl-(acyl-carrier 80.9 8.2 0.00028 30.7 8.6 79 41-131 32-121 (275)
420 3gk3_A Acetoacetyl-COA reducta 80.9 8.2 0.00028 30.3 8.5 79 41-131 24-115 (269)
421 3l77_A Short-chain alcohol deh 80.9 3.7 0.00013 31.4 6.3 78 42-131 2-92 (235)
422 3o26_A Salutaridine reductase; 80.9 2.2 7.7E-05 33.8 5.1 78 41-130 11-102 (311)
423 2c20_A UDP-glucose 4-epimerase 80.6 4.3 0.00015 32.5 6.8 72 44-130 3-78 (330)
424 3ai3_A NADPH-sorbose reductase 80.5 5 0.00017 31.4 7.0 78 41-130 6-96 (263)
425 3ip1_A Alcohol dehydrogenase, 80.5 2.3 8E-05 36.0 5.4 73 39-125 211-288 (404)
426 3rih_A Short chain dehydrogena 80.4 7.5 0.00026 31.3 8.2 79 41-131 40-131 (293)
427 3gms_A Putative NADPH:quinone 80.4 3.7 0.00013 33.7 6.4 73 39-126 142-220 (340)
428 3m1a_A Putative dehydrogenase; 80.4 4.6 0.00016 31.8 6.8 77 42-130 5-90 (281)
429 1fmc_A 7 alpha-hydroxysteroid 80.3 5.2 0.00018 30.7 7.0 79 41-131 10-100 (255)
430 1ae1_A Tropinone reductase-I; 80.3 6.4 0.00022 31.1 7.7 79 41-131 20-111 (273)
431 2wyu_A Enoyl-[acyl carrier pro 80.2 1.7 5.8E-05 34.2 4.1 79 41-130 7-97 (261)
432 4dqx_A Probable oxidoreductase 80.2 4.3 0.00015 32.4 6.6 79 41-131 26-113 (277)
433 4e6p_A Probable sorbitol dehyd 80.1 4.4 0.00015 31.7 6.6 78 41-130 7-93 (259)
434 2ae2_A Protein (tropinone redu 80.1 5.6 0.00019 31.1 7.2 78 41-130 8-98 (260)
435 1ek6_A UDP-galactose 4-epimera 80.1 6.6 0.00023 31.6 7.8 73 43-130 3-92 (348)
436 3f9i_A 3-oxoacyl-[acyl-carrier 80.0 3.5 0.00012 31.9 5.9 78 40-131 12-96 (249)
437 1xu9_A Corticosteroid 11-beta- 79.9 20 0.00069 28.2 10.8 77 41-129 27-117 (286)
438 3ay3_A NAD-dependent epimerase 79.9 4.6 0.00016 31.5 6.6 70 44-130 4-74 (267)
439 3ucx_A Short chain dehydrogena 79.9 3.4 0.00012 32.6 5.8 77 41-129 10-98 (264)
440 3uve_A Carveol dehydrogenase ( 79.7 6.8 0.00023 31.0 7.7 80 41-132 10-117 (286)
441 3rwb_A TPLDH, pyridoxal 4-dehy 79.7 3.9 0.00013 31.9 6.1 79 41-131 5-92 (247)
442 1p0f_A NADP-dependent alcohol 79.7 4.8 0.00017 33.4 7.0 38 39-89 189-227 (373)
443 3i6i_A Putative leucoanthocyan 79.6 7.4 0.00025 31.5 8.0 72 43-129 11-93 (346)
444 4egf_A L-xylulose reductase; s 79.6 3.4 0.00011 32.7 5.7 79 41-131 19-110 (266)
445 4fc7_A Peroxisomal 2,4-dienoyl 79.6 6.2 0.00021 31.3 7.4 78 41-130 26-116 (277)
446 1wma_A Carbonyl reductase [NAD 79.5 4.7 0.00016 31.1 6.5 80 41-131 3-94 (276)
447 3fwz_A Inner membrane protein 79.5 1.1 3.7E-05 32.2 2.5 68 43-127 8-79 (140)
448 4ft4_B DNA (cytosine-5)-methyl 79.4 0.95 3.3E-05 42.0 2.7 55 43-105 213-273 (784)
449 3ksu_A 3-oxoacyl-acyl carrier 79.3 11 0.00037 29.6 8.7 79 41-131 10-103 (262)
450 3oec_A Carveol dehydrogenase ( 79.2 11 0.00038 30.6 9.0 79 41-131 45-147 (317)
451 3v2h_A D-beta-hydroxybutyrate 78.9 6.5 0.00022 31.3 7.4 80 42-133 25-118 (281)
452 3nyw_A Putative oxidoreductase 78.8 5.8 0.0002 31.0 6.9 83 41-135 6-103 (250)
453 3gvc_A Oxidoreductase, probabl 78.7 5.1 0.00017 32.0 6.6 78 41-130 28-114 (277)
454 3t4x_A Oxidoreductase, short c 78.5 14 0.00047 29.0 9.1 77 41-131 9-97 (267)
455 1r6d_A TDP-glucose-4,6-dehydra 78.5 10 0.00035 30.4 8.4 72 44-129 2-86 (337)
456 3gem_A Short chain dehydrogena 78.4 3.5 0.00012 32.6 5.5 81 41-133 26-113 (260)
457 1yde_A Retinal dehydrogenase/r 78.4 2.4 8.1E-05 33.7 4.5 78 41-130 8-93 (270)
458 3tzq_B Short-chain type dehydr 78.4 4.8 0.00016 31.8 6.4 78 41-130 10-96 (271)
459 3ehe_A UDP-glucose 4-epimerase 78.4 23 0.00078 27.9 10.8 68 44-130 3-74 (313)
460 2c29_D Dihydroflavonol 4-reduc 78.4 23 0.00078 28.3 10.6 72 42-130 5-88 (337)
461 1cdo_A Alcohol dehydrogenase; 78.3 3.4 0.00012 34.4 5.7 38 39-89 190-228 (374)
462 3ius_A Uncharacterized conserv 78.3 5.4 0.00019 31.2 6.6 66 43-131 6-75 (286)
463 1w6u_A 2,4-dienoyl-COA reducta 78.2 9.7 0.00033 30.1 8.2 77 42-130 26-115 (302)
464 3k31_A Enoyl-(acyl-carrier-pro 78.2 2.7 9.4E-05 33.9 4.9 79 41-130 29-119 (296)
465 3r6d_A NAD-dependent epimerase 78.2 6 0.00021 29.8 6.6 69 44-129 7-83 (221)
466 3ak4_A NADH-dependent quinucli 78.2 9 0.00031 29.8 7.9 78 41-130 11-97 (263)
467 3uf0_A Short-chain dehydrogena 78.0 13 0.00046 29.3 8.9 79 41-131 30-118 (273)
468 2gdz_A NAD+-dependent 15-hydro 78.0 3.9 0.00013 32.1 5.6 78 41-130 6-97 (267)
469 2gn4_A FLAA1 protein, UDP-GLCN 77.9 3.4 0.00012 34.0 5.5 73 41-130 20-102 (344)
470 2yy7_A L-threonine dehydrogena 77.9 3.3 0.00011 32.8 5.3 74 43-129 3-78 (312)
471 3nrc_A Enoyl-[acyl-carrier-pro 77.9 8.1 0.00028 30.6 7.6 79 41-130 25-114 (280)
472 3sx2_A Putative 3-ketoacyl-(ac 77.9 23 0.00078 27.7 12.0 79 41-131 12-114 (278)
473 4iin_A 3-ketoacyl-acyl carrier 77.8 8 0.00027 30.4 7.5 80 41-132 28-120 (271)
474 3oig_A Enoyl-[acyl-carrier-pro 77.7 7 0.00024 30.5 7.1 79 41-130 6-98 (266)
475 1zk4_A R-specific alcohol dehy 77.7 8.5 0.00029 29.4 7.5 77 42-130 6-93 (251)
476 1kew_A RMLB;, DTDP-D-glucose 4 77.6 9.4 0.00032 30.8 8.1 72 44-129 2-83 (361)
477 2pnf_A 3-oxoacyl-[acyl-carrier 77.6 5.2 0.00018 30.6 6.2 79 41-131 6-97 (248)
478 2a35_A Hypothetical protein PA 77.5 1.2 4.1E-05 33.4 2.4 69 42-129 5-75 (215)
479 3gaf_A 7-alpha-hydroxysteroid 77.5 5.5 0.00019 31.2 6.4 81 41-133 11-103 (256)
480 3ged_A Short-chain dehydrogena 77.5 7.8 0.00027 31.0 7.3 77 43-133 3-89 (247)
481 3grp_A 3-oxoacyl-(acyl carrier 77.3 5.3 0.00018 31.6 6.3 79 41-131 26-113 (266)
482 3iht_A S-adenosyl-L-methionine 77.2 10 0.00036 29.0 7.4 70 43-128 42-115 (174)
483 1y1p_A ARII, aldehyde reductas 77.2 3.9 0.00013 32.7 5.5 74 41-131 10-95 (342)
484 3ezl_A Acetoacetyl-COA reducta 77.1 9 0.00031 29.6 7.5 80 40-131 11-103 (256)
485 1x1t_A D(-)-3-hydroxybutyrate 77.1 6.3 0.00022 30.8 6.6 78 42-131 4-95 (260)
486 2g1u_A Hypothetical protein TM 76.9 6.8 0.00023 28.2 6.4 71 40-127 17-92 (155)
487 3grk_A Enoyl-(acyl-carrier-pro 76.9 2.1 7.2E-05 34.6 3.8 79 41-130 30-120 (293)
488 3ko8_A NAD-dependent epimerase 76.8 17 0.00057 28.6 9.2 67 44-129 2-72 (312)
489 3ijr_A Oxidoreductase, short c 76.7 5.6 0.00019 31.9 6.4 77 41-129 46-135 (291)
490 3tsc_A Putative oxidoreductase 76.6 25 0.00084 27.6 10.1 80 41-132 10-114 (277)
491 1sby_A Alcohol dehydrogenase; 76.6 3.6 0.00012 31.9 5.0 77 41-129 4-94 (254)
492 3op4_A 3-oxoacyl-[acyl-carrier 76.5 4.6 0.00016 31.5 5.6 80 41-132 8-96 (248)
493 3t7c_A Carveol dehydrogenase; 76.5 9.6 0.00033 30.6 7.7 79 41-131 27-129 (299)
494 1e3i_A Alcohol dehydrogenase, 76.5 6 0.0002 32.9 6.6 38 39-89 193-231 (376)
495 2ehd_A Oxidoreductase, oxidore 76.3 5.8 0.0002 30.2 6.1 77 42-130 5-89 (234)
496 1vj0_A Alcohol dehydrogenase, 76.2 2.4 8.1E-05 35.6 4.1 74 39-126 193-274 (380)
497 3v8b_A Putative dehydrogenase, 76.1 4.7 0.00016 32.3 5.7 77 41-129 27-115 (283)
498 1qyd_A Pinoresinol-lariciresin 76.1 26 0.0009 27.4 10.9 71 43-130 5-87 (313)
499 2q2v_A Beta-D-hydroxybutyrate 76.1 14 0.00049 28.5 8.5 77 42-130 4-90 (255)
500 4ej6_A Putative zinc-binding d 76.0 3 0.0001 34.9 4.7 72 39-125 180-259 (370)
No 1
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.97 E-value=6.7e-30 Score=202.80 Aligned_cols=141 Identities=26% Similarity=0.336 Sum_probs=122.9
Q ss_pred hhCCcchhhhcHHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCeeE
Q 030299 18 EEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQ 97 (179)
Q Consensus 18 ~~~~~sRaa~KL~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v~~ 97 (179)
++|||+||+|||.||+++|.+++++.+|||||||||+||++++++ . +.|+|+|++++.+.+++++
T Consensus 2 ~~~yr~Ra~~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~-~--------------~~V~gvD~~~~~~~~~v~~ 66 (191)
T 3dou_A 2 SLQLRSRAAFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL-A--------------RKIISIDLQEMEEIAGVRF 66 (191)
T ss_dssp --CTTSHHHHHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT-C--------------SEEEEEESSCCCCCTTCEE
T ss_pred CCCCCCcHHHHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc-C--------------CcEEEEeccccccCCCeEE
Confidence 689999999999999999999999999999999999999999887 3 7999999999998899999
Q ss_pred EeccccchhhHHHHHhhcC---CCCccEEeeCCCCCCCCCCcccHHHHHHHHHHHHHHHH------------------HH
Q 030299 98 VQGDITNARTAEVVIRHFD---GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAVSIQFF------------------IY 156 (179)
Q Consensus 98 i~gDi~~~~~~~~l~~~~~---~~~~D~VlsD~~~~~~g~~~~d~~~q~~L~~~AL~~~~------------------~~ 156 (179)
+++|+++.++...+.+.+. .++||+|+|||+|+++|.+..|+..+..++..+|..+. ..
T Consensus 67 ~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~ 146 (191)
T 3dou_A 67 IRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTN 146 (191)
T ss_dssp EECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHH
T ss_pred EEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHH
Confidence 9999999877666665543 13899999999999999999999999999988887542 24
Q ss_pred HHHHHHHHhhceEEEee
Q 030299 157 ELVFCLRQLLQYVILDG 173 (179)
Q Consensus 157 ~~~~~~~~~f~~v~~~~ 173 (179)
.+++.|++.|++|.+..
T Consensus 147 ~~~~~l~~~F~~v~~~k 163 (191)
T 3dou_A 147 DFIAIWRKNFSSYKISK 163 (191)
T ss_dssp HHHHHHGGGEEEEEEEC
T ss_pred HHHHHHHHhcCEEEEEC
Confidence 67788999999999854
No 2
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=99.95 E-value=3.9e-28 Score=201.50 Aligned_cols=125 Identities=19% Similarity=0.174 Sum_probs=101.7
Q ss_pred CCcchhhhcHHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHH--hCCCCCCCCCCCCCCCCeEEEEe--CCCCCCC-CC
Q 030299 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRK--LYLPAKLSPDSREGDLPLIVAID--LQPMAPI-EG 94 (179)
Q Consensus 20 ~~~sRaa~KL~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~--~~~~~~~~~~~~~~~~~~VvavD--~~~~~~~-~~ 94 (179)
+|||||+|||.||++++ +++||++||||||+|||||||++++ ++. ..+.|+|+| +.||.+. +|
T Consensus 53 ~yRSRAayKL~EIdeK~-likpg~~VVDLGaAPGGWSQvAa~~~~vg~-----------V~G~vig~D~~~~P~~~~~~G 120 (269)
T 2px2_A 53 HPVSRGTAKLRWLVERR-FVQPIGKVVDLGCGRGGWSYYAATMKNVQE-----------VRGYTKGGPGHEEPMLMQSYG 120 (269)
T ss_dssp CCSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTSHHHHHHTTSTTEEE-----------EEEECCCSTTSCCCCCCCSTT
T ss_pred CcccHHHHHHHHHHHcC-CCCCCCEEEEcCCCCCHHHHHHhhhcCCCC-----------ceeEEEccccccCCCcccCCC
Confidence 79999999999999998 9999999999999999999999998 420 136889999 6666655 78
Q ss_pred eeEE---ec-cccchhhHHHHHhhcCCCCccEEeeCCCCCCCCCCcccHHHHHHHHHHHHHHH----------H------
Q 030299 95 VIQV---QG-DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAVSIQF----------F------ 154 (179)
Q Consensus 95 v~~i---~g-Di~~~~~~~~l~~~~~~~~~D~VlsD~~~~~~g~~~~d~~~q~~L~~~AL~~~----------~------ 154 (179)
+.++ +| |+++. .+.++|+|||||+|+ +|++..|+..++. ||.++ |
T Consensus 121 v~~i~~~~G~Df~~~----------~~~~~DvVLSDMAPn-SG~~~vD~~Rs~~----aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 121 WNIVTMKSGVDVFYK----------PSEISDTLLCDIGES-SPSAEIEEQRTLR----ILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp GGGEEEECSCCGGGS----------CCCCCSEEEECCCCC-CSCHHHHHHHHHH----HHHHHHHHHTTCCSEEEEEESC
T ss_pred ceEEEeeccCCccCC----------CCCCCCEEEeCCCCC-CCccHHHHHHHHH----HHHHHHHHhhcCCcEEEEEECC
Confidence 8555 47 99984 346899999999998 9999999988877 33332 1
Q ss_pred -----HHHHHHHHHHhhceEEE
Q 030299 155 -----IYELVFCLRQLLQYVIL 171 (179)
Q Consensus 155 -----~~~~~~~~~~~f~~v~~ 171 (179)
+..++..|++.|.+|.+
T Consensus 186 g~~~~~~~~l~~lk~~F~~vkv 207 (269)
T 2px2_A 186 PYMPKVIEKLESLQRRFGGGLV 207 (269)
T ss_dssp TTSHHHHHHHHHHHHHHCCEEE
T ss_pred CCchHHHHHHHHHHHHcCCEEE
Confidence 24556789999999875
No 3
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=99.92 E-value=4.9e-25 Score=184.93 Aligned_cols=132 Identities=19% Similarity=0.178 Sum_probs=101.7
Q ss_pred hCCcchhhhcHHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCC---CCCCC--
Q 030299 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP---MAPIE-- 93 (179)
Q Consensus 19 ~~~~sRaa~KL~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~---~~~~~-- 93 (179)
..|||||||||.||+++| +++++.+|||||||||||+||++++.+ ...|+|+|+.. +.|++
T Consensus 69 g~YrSRAAfKL~ei~eK~-~Lk~~~~VLDLGaAPGGWsQvAa~~~g-------------v~sV~GvdvG~d~~~~pi~~~ 134 (282)
T 3gcz_A 69 GIAVSRGSAKLRWMEERG-YVKPTGIVVDLGCGRGGWSYYAASLKN-------------VKKVMAFTLGVQGHEKPIMRT 134 (282)
T ss_dssp SBCSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTCHHHHHHHTSTT-------------EEEEEEECCCCTTSCCCCCCC
T ss_pred CCEecHHHHHHHHHHHhc-CCCCCCEEEEeCCCCCHHHHHHHHhcC-------------CCeeeeEEeccCccccccccc
Confidence 469999999999999998 789999999999999999999998765 36799999974 33433
Q ss_pred --C--eeEEeccccchhhHHHHHhhcCCCCccEEeeCCCCCCCCCCcccHHHHHHHHHHHHHHH-------H--------
Q 030299 94 --G--VIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAVSIQF-------F-------- 154 (179)
Q Consensus 94 --~--v~~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~~~~g~~~~d~~~q~~L~~~AL~~~-------~-------- 154 (179)
+ +...+.++... .++++++|+|+|||+|+ +|.+..|++.++.|+.-|.... |
T Consensus 135 ~~g~~ii~~~~~~dv~--------~l~~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~py 205 (282)
T 3gcz_A 135 TLGWNLIRFKDKTDVF--------NMEVIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPY 205 (282)
T ss_dssp BTTGGGEEEECSCCGG--------GSCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCC
T ss_pred cCCCceEEeeCCcchh--------hcCCCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCC
Confidence 2 32333222111 24567899999999999 9999999999888854443321 1
Q ss_pred ---HHHHHHHHHHhhceEEEee
Q 030299 155 ---IYELVFCLRQLLQYVILDG 173 (179)
Q Consensus 155 ---~~~~~~~~~~~f~~v~~~~ 173 (179)
...+++.|+++|++|.+.+
T Consensus 206 g~~~~~l~~~lk~~F~~V~~~K 227 (282)
T 3gcz_A 206 TPLIMEELSRLQLKHGGGLVRV 227 (282)
T ss_dssp SHHHHHHHHHHHHHHCCEEECC
T ss_pred CccHHHHHHHHHHhcCCEEEEc
Confidence 2468899999999999864
No 4
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=99.91 E-value=5.1e-24 Score=178.45 Aligned_cols=131 Identities=16% Similarity=0.213 Sum_probs=102.1
Q ss_pred CCcchhhhcHHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCC---CCCCCC---
Q 030299 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQ---PMAPIE--- 93 (179)
Q Consensus 20 ~~~sRaa~KL~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~---~~~~~~--- 93 (179)
.|||||||||.||+++ .+++++.+||||||||||||++++++.+ ...|.|+|+. ++.|.+
T Consensus 54 ~YrSRaA~KL~ei~ek-~~l~~~~~VLDLGaAPGGWSQvAa~~~~-------------~~~v~g~dVGvDl~~~pi~~~~ 119 (277)
T 3evf_A 54 VAVSRGTAKLRWFHER-GYVKLEGRVIDLGCGRGGWCYYAAAQKE-------------VSGVKGFTLGRDGHEKPMNVQS 119 (277)
T ss_dssp BCSSTHHHHHHHHHHT-TSSCCCEEEEEETCTTCHHHHHHHTSTT-------------EEEEEEECCCCTTCCCCCCCCB
T ss_pred CccccHHHHHHHHHHh-CCCCCCCEEEEecCCCCHHHHHHHHhcC-------------CCcceeEEEeccCcccccccCc
Confidence 4999999999999999 6889999999999999999999998754 2456666665 344443
Q ss_pred ---CeeEEeccccchhhHHHHHhhcCCCCccEEeeCCCCCCCCCCcccHHHHHHHHHHHHHHH------H----------
Q 030299 94 ---GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAVSIQF------F---------- 154 (179)
Q Consensus 94 ---~v~~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~~~~g~~~~d~~~q~~L~~~AL~~~------~---------- 154 (179)
++..+++++... .+++.++|+|+|||+|+ +|.+..|++.++.|+.-|.... |
T Consensus 120 ~g~~ii~~~~~~dv~--------~l~~~~~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~ 190 (277)
T 3evf_A 120 LGWNIITFKDKTDIH--------RLEPVKCDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMP 190 (277)
T ss_dssp TTGGGEEEECSCCTT--------TSCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSH
T ss_pred CCCCeEEEeccceeh--------hcCCCCccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCc
Confidence 555666665332 25567899999999999 9999999999887744443321 1
Q ss_pred -HHHHHHHHHHhhceEEEee
Q 030299 155 -IYELVFCLRQLLQYVILDG 173 (179)
Q Consensus 155 -~~~~~~~~~~~f~~v~~~~ 173 (179)
...+++.|+++|++|.+.+
T Consensus 191 ~~~~l~~~lk~~F~~V~~~K 210 (277)
T 3evf_A 191 DVLEKLELLQRRFGGTVIRN 210 (277)
T ss_dssp HHHHHHHHHHHHHCCEEECC
T ss_pred cHHHHHHHHHHhcCCEEEEe
Confidence 3578899999999999864
No 5
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.90 E-value=3.4e-23 Score=162.10 Aligned_cols=143 Identities=25% Similarity=0.385 Sum_probs=115.6
Q ss_pred CCcchhhhcHHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCeeEEe
Q 030299 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQ 99 (179)
Q Consensus 20 ~~~sRaa~KL~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v~~i~ 99 (179)
|||+||++||.++++++.+++++.+|||||||||+|+.+++++.+. ..++|+|+|++++...+++++++
T Consensus 1 ~~~~r~~~kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~-----------~~~~v~gvD~s~~~~~~~v~~~~ 69 (201)
T 2plw_A 1 NYRSRAAYKLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKN-----------YKNKIIGIDKKIMDPIPNVYFIQ 69 (201)
T ss_dssp -CCSTTHHHHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTT-----------SCEEEEEEESSCCCCCTTCEEEE
T ss_pred CcchHHHHHHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCC-----------CCceEEEEeCCccCCCCCceEEE
Confidence 6999999999999999999999999999999999999999998751 03799999999998778999999
Q ss_pred ccccchh-----------------hHHHHHhhcCCCCccEEeeCCCCCCCCCCcccHHHHHHHHHHHHHHHH--------
Q 030299 100 GDITNAR-----------------TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAVSIQFF-------- 154 (179)
Q Consensus 100 gDi~~~~-----------------~~~~l~~~~~~~~~D~VlsD~~~~~~g~~~~d~~~q~~L~~~AL~~~~-------- 154 (179)
+|+.+.+ ...++.+.+++..||+|++|+++...|.+..|+..+..+...++..+.
T Consensus 70 ~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~ 149 (201)
T 2plw_A 70 GEIGKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGT 149 (201)
T ss_dssp CCTTTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred ccccchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCE
Confidence 9998865 333444445667899999999998888888888777777666665331
Q ss_pred ----------HHHHHHHHHHhhceEEEee
Q 030299 155 ----------IYELVFCLRQLLQYVILDG 173 (179)
Q Consensus 155 ----------~~~~~~~~~~~f~~v~~~~ 173 (179)
...++..+++.|+.|.+..
T Consensus 150 lv~~~~~~~~~~~l~~~l~~~f~~v~~~~ 178 (201)
T 2plw_A 150 YIVKMYLGSQTNNLKTYLKGMFQLVHTTK 178 (201)
T ss_dssp EEEEEECSTTHHHHHHHHHTTEEEEEECC
T ss_pred EEEEEeCCCCHHHHHHHHHHHHheEEEEC
Confidence 2456677888898887653
No 6
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=99.90 E-value=1.3e-23 Score=177.36 Aligned_cols=130 Identities=16% Similarity=0.159 Sum_probs=101.5
Q ss_pred hCCcchhhhcHHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---CCCC--
Q 030299 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---APIE-- 93 (179)
Q Consensus 19 ~~~~sRaa~KL~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---~~~~-- 93 (179)
-+|||||||||.|++++ ++++++.+||||||||||||++++++.+ ...|+|+|+... .|..
T Consensus 60 g~yrSRaa~KL~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~g-------------v~sV~Gvdlg~~~~~~P~~~~ 125 (300)
T 3eld_A 60 GISVSRGAAKIRWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKE-------------VMSVKGYTLGIEGHEKPIHMQ 125 (300)
T ss_dssp CCCSSTTHHHHHHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTT-------------EEEEEEECCCCTTSCCCCCCC
T ss_pred CCccchHHHHHHHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcC-------------CceeeeEEecccccccccccc
Confidence 37999999999999999 9999999999999999999999998765 357999999753 2221
Q ss_pred ----CeeEEec--cccchhhHHHHHhhcCCCCccEEeeCCCCCCCCCCcccHHHHHHHHHHHHHHH------H-------
Q 030299 94 ----GVIQVQG--DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAVSIQF------F------- 154 (179)
Q Consensus 94 ----~v~~i~g--Di~~~~~~~~l~~~~~~~~~D~VlsD~~~~~~g~~~~d~~~q~~L~~~AL~~~------~------- 154 (179)
++..... |+. .+.+.++|+|+|||+|+ +|.+..|++.|..|+.-|.... |
T Consensus 126 ~~~~~iv~~~~~~di~----------~l~~~~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~ 194 (300)
T 3eld_A 126 TLGWNIVKFKDKSNVF----------TMPTEPSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAP 194 (300)
T ss_dssp BTTGGGEEEECSCCTT----------TSCCCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESST
T ss_pred ccCCceEEeecCceee----------ecCCCCcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccc
Confidence 2222221 222 14567899999999999 9999999999999954444321 1
Q ss_pred ----HHHHHHHHHHhhceEEEee
Q 030299 155 ----IYELVFCLRQLLQYVILDG 173 (179)
Q Consensus 155 ----~~~~~~~~~~~f~~v~~~~ 173 (179)
...+++.|+++|++|.+.+
T Consensus 195 yG~~~~~ll~~lk~~F~~V~~~K 217 (300)
T 3eld_A 195 YHPDVIEKLERLQLRFGGGIVRV 217 (300)
T ss_dssp TSHHHHHHHHHHHHHHCCEEECC
T ss_pred cCccHHHHHHHHHHhCCcEEEEe
Confidence 3578899999999998864
No 7
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.89 E-value=2e-22 Score=156.83 Aligned_cols=150 Identities=31% Similarity=0.470 Sum_probs=119.3
Q ss_pred CCcchhhhcHHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCeeEE-
Q 030299 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQV- 98 (179)
Q Consensus 20 ~~~sRaa~KL~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v~~i- 98 (179)
||++|+++||.++++++.+++++.+|||||||||.++..++++.+.. +.....+.++|+|+|++++...++++++
T Consensus 1 ~~~~r~~~kl~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~----~~~~~~~~~~v~~vD~s~~~~~~~~~~~~ 76 (196)
T 2nyu_A 1 SYRSRSAFKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAA----GTDPSSPVGFVLGVDLLHIFPLEGATFLC 76 (196)
T ss_dssp CCSSTHHHHHHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTT----CCCTTSCCCEEEEECSSCCCCCTTCEEEC
T ss_pred CchhHHHHHHHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccc----cccccCCCceEEEEechhcccCCCCeEEE
Confidence 69999999999999999999999999999999999999999987520 0000111279999999998877899999
Q ss_pred eccccchhhHHHHHhhcCCCCccEEeeCCCCCCCCCCcccHHHHHHHHHHHHHHHH------------------HHHHHH
Q 030299 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAVSIQFF------------------IYELVF 160 (179)
Q Consensus 99 ~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~~~~g~~~~d~~~q~~L~~~AL~~~~------------------~~~~~~ 160 (179)
++|+++......+...+++++||+|++|++++.+|++..++..+..+...++..+. ...++.
T Consensus 77 ~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~ 156 (196)
T 2nyu_A 77 PADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQR 156 (196)
T ss_dssp SCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHH
T ss_pred eccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHH
Confidence 99999876655555556666899999999999999998888777766666665431 145667
Q ss_pred HHHHhhceEEEee
Q 030299 161 CLRQLLQYVILDG 173 (179)
Q Consensus 161 ~~~~~f~~v~~~~ 173 (179)
.++..|..|.+..
T Consensus 157 ~l~~~f~~v~~~~ 169 (196)
T 2nyu_A 157 RLTEEFQNVRIIK 169 (196)
T ss_dssp HHHHHEEEEEEEC
T ss_pred HHHHHhcceEEEC
Confidence 7788888887654
No 8
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=99.88 E-value=1.5e-22 Score=166.23 Aligned_cols=101 Identities=19% Similarity=0.131 Sum_probs=87.4
Q ss_pred hCCcchhhhcHHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCC------
Q 030299 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPI------ 92 (179)
Q Consensus 19 ~~~~sRaa~KL~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~------ 92 (179)
.+||||++|||.||+++| +++++++|+||||+|||||+|++.+.+ ..+|+|+|+.++...
T Consensus 57 g~yrSRa~~KL~ei~ek~-~l~~g~~VvDLGaapGGWSq~~a~~~g-------------~~~V~avdvG~~ghe~P~~~~ 122 (267)
T 3p8z_A 57 HHAVSRGSAKLQWFVERN-MVIPEGRVIDLGCGRGGWSYYCAGLKK-------------VTEVRGYTKGGPGHEEPVPMS 122 (267)
T ss_dssp SCCSSTHHHHHHHHHHTT-SSCCCEEEEEESCTTSHHHHHHHTSTT-------------EEEEEEECCCSTTSCCCCCCC
T ss_pred CCccchHHHHHHHHHHhc-CCCCCCEEEEcCCCCCcHHHHHHHhcC-------------CCEEEEEecCCCCccCcchhh
Confidence 379999999999999999 789999999999999999999998876 358999999987422
Q ss_pred ----CCeeEEec-cccchhhHHHHHhhcCCCCccEEeeCCCCCCCCCCcccHHHHHH
Q 030299 93 ----EGVIQVQG-DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQ 144 (179)
Q Consensus 93 ----~~v~~i~g-Di~~~~~~~~l~~~~~~~~~D~VlsD~~~~~~g~~~~d~~~q~~ 144 (179)
+.|+|.++ |++..+ ..++|+|+||++| .++....|+..+++
T Consensus 123 s~gwn~v~fk~gvDv~~~~----------~~~~DtllcDIge-Ss~~~~vE~~Rtlr 168 (267)
T 3p8z_A 123 TYGWNIVKLMSGKDVFYLP----------PEKCDTLLCDIGE-SSPSPTVEESRTIR 168 (267)
T ss_dssp CTTTTSEEEECSCCGGGCC----------CCCCSEEEECCCC-CCSCHHHHHHHHHH
T ss_pred hcCcCceEEEeccceeecC----------CccccEEEEecCC-CCCChhhhhhHHHH
Confidence 57999999 997643 3679999999999 88888888877766
No 9
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.81 E-value=1.9e-19 Score=149.87 Aligned_cols=126 Identities=17% Similarity=0.273 Sum_probs=100.4
Q ss_pred CCcchhhhcHHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------CCCC
Q 030299 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------APIE 93 (179)
Q Consensus 20 ~~~sRaa~KL~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~------~~~~ 93 (179)
.|+||+++||.+++++ .+++++.+|||||||||+||++++++ ++|+|+|+++| .+.+
T Consensus 54 ~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcGtG~~s~~la~~----------------~~V~gvD~s~m~~~a~~~~~~ 116 (265)
T 2oxt_A 54 LSVSRGTAKLAWMEER-GYVELTGRVVDLGCGRGGWSYYAASR----------------PHVMDVRAYTLGVGGHEVPRI 116 (265)
T ss_dssp BCSSTHHHHHHHHHHH-TSCCCCEEEEEESCTTSHHHHHHHTS----------------TTEEEEEEECCCCSSCCCCCC
T ss_pred CccchHHHHHHHHHHc-CCCCCCCEEEEeCcCCCHHHHHHHHc----------------CcEEEEECchhhhhhhhhhhh
Confidence 5899999999999999 77899999999999999999999875 36999999998 3444
Q ss_pred ------CeeEE--eccccchhhHHHHHhhcCCCCccEEeeCCCCCCCCCCcccHHHHHHHH---HHHHH--H--HH----
Q 030299 94 ------GVIQV--QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLI---LAVSI--Q--FF---- 154 (179)
Q Consensus 94 ------~v~~i--~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~~~~g~~~~d~~~q~~L~---~~AL~--~--~~---- 154 (179)
++.++ ++|+++. ++.+||+|+||++ +.++.+..|+..++..+ ...|+ - .|
T Consensus 117 ~~~~~~~v~~~~~~~D~~~l----------~~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 117 TESYGWNIVKFKSRVDIHTL----------PVERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp CCBTTGGGEEEECSCCTTTS----------CCCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred hhccCCCeEEEecccCHhHC----------CCCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 78999 9999984 3468999999999 88888877776544422 22232 1 11
Q ss_pred -------HHHHHHHHHHhhceEEEee
Q 030299 155 -------IYELVFCLRQLLQYVILDG 173 (179)
Q Consensus 155 -------~~~~~~~~~~~f~~v~~~~ 173 (179)
+..++..+.+.|.+|.+..
T Consensus 186 ~~~~~~~~~~~l~~l~~~f~~v~~~k 211 (265)
T 2oxt_A 186 LCPYSVEVMERLSVMQRKWGGGLVRN 211 (265)
T ss_dssp SCTTSHHHHHHHHHHHHHHCCEEECC
T ss_pred CCCCChhHHHHHHHHHHHcCCEEEEE
Confidence 2377888999999988765
No 10
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=99.78 E-value=1.8e-19 Score=156.63 Aligned_cols=94 Identities=24% Similarity=0.313 Sum_probs=79.9
Q ss_pred hhCCcchhhhcHHhHHHHh-------CCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC
Q 030299 18 EEGWRARSAFKLLQIDEEF-------NIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA 90 (179)
Q Consensus 18 ~~~~~sRaa~KL~eid~~~-------~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~ 90 (179)
..+.+|||+|||.|+..+| .++++|++||||||+|||||++++++ ++.|+|||+.+|.
T Consensus 181 ~~~~pSRa~lKL~Ea~~~F~~~~~~~~~l~~G~~vlDLGAaPGGWT~~l~~r---------------g~~V~aVD~~~l~ 245 (375)
T 4auk_A 181 PADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKR---------------NMWVYSVDNGPMA 245 (375)
T ss_dssp CTTSSCTTHHHHHHHHHHHSCGGGHHHHSCTTCEEEEETCTTCHHHHHHHHT---------------TCEEEEECSSCCC
T ss_pred CCCCCCHHHHHHHHHHHhccchhhhhccCCCCCEEEEeCcCCCHHHHHHHHC---------------CCEEEEEEhhhcC
Confidence 3467999999999987776 35789999999999999999999987 3799999999997
Q ss_pred C----CCCeeEEeccccchhhHHHHHhhcCCCCccEEeeCCCCCCCCC
Q 030299 91 P----IEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGL 134 (179)
Q Consensus 91 ~----~~~v~~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~~~~g~ 134 (179)
+ .++|+++++|.+..+. ...+||+|+|||+++.++.
T Consensus 246 ~~l~~~~~V~~~~~d~~~~~~--------~~~~~D~vvsDm~~~p~~~ 285 (375)
T 4auk_A 246 QSLMDTGQVTWLREDGFKFRP--------TRSNISWMVCDMVEKPAKV 285 (375)
T ss_dssp HHHHTTTCEEEECSCTTTCCC--------CSSCEEEEEECCSSCHHHH
T ss_pred hhhccCCCeEEEeCccccccC--------CCCCcCEEEEcCCCChHHh
Confidence 4 5799999999988652 3468999999999866554
No 11
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.77 E-value=2.1e-18 Score=146.15 Aligned_cols=126 Identities=18% Similarity=0.167 Sum_probs=97.0
Q ss_pred hCCcchhhhcHHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeC----CC--CC--
Q 030299 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDL----QP--MA-- 90 (179)
Q Consensus 19 ~~~~sRaa~KL~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~----~~--~~-- 90 (179)
.+|++|++|||.+++++ .++++|.+|||||||||+||++++++ +.|+|+|+ ++ +.
T Consensus 61 ~~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcG~G~~s~~la~~----------------~~V~gvD~~~~~~~~~~~~~ 123 (305)
T 2p41_A 61 HHAVSRGSAKLRWFVER-NLVTPEGKVVDLGCGRGGWSYYCGGL----------------KNVREVKGLTKGGPGHEEPI 123 (305)
T ss_dssp SCCSSTHHHHHHHHHHT-TSSCCCEEEEEETCTTSHHHHHHHTS----------------TTEEEEEEECCCSTTSCCCC
T ss_pred CCccccHHHHHHHHHHc-CCCCCCCEEEEEcCCCCHHHHHHHhc----------------CCEEEEeccccCchhHHHHH
Confidence 46899999999999999 78899999999999999999999876 36999999 33 22
Q ss_pred ---CC--CCeeEEec-cccchhhHHHHHhhcCCCCccEEeeCCCCCCCCCCcccHHHHHHHHHHHHHHH-----H-----
Q 030299 91 ---PI--EGVIQVQG-DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAVSIQF-----F----- 154 (179)
Q Consensus 91 ---~~--~~v~~i~g-Di~~~~~~~~l~~~~~~~~~D~VlsD~~~~~~g~~~~d~~~q~~L~~~AL~~~-----~----- 154 (179)
+. +++.++++ |+++.+ ..+||+|+||++++ +|++..|+..++..+..+.+.. |
T Consensus 124 ~~~~~~~~~v~~~~~~D~~~l~----------~~~fD~V~sd~~~~-~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 124 PMSTYGWNLVRLQSGVDVFFIP----------PERCDTLLCDIGES-SPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp CCCSTTGGGEEEECSCCTTTSC----------CCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred HhhhcCCCCeEEEeccccccCC----------cCCCCEEEECCccc-cCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 22 57899999 888743 35899999999998 8888888765543222222211 1
Q ss_pred ------HHHHHHHHHHhhceEEEe
Q 030299 155 ------IYELVFCLRQLLQYVILD 172 (179)
Q Consensus 155 ------~~~~~~~~~~~f~~v~~~ 172 (179)
+..++..+++.|..|.+.
T Consensus 193 ~~~~~~~~~~l~~l~~~f~~v~~~ 216 (305)
T 2p41_A 193 NPYMSSVIEKMEALQRKHGGALVR 216 (305)
T ss_dssp CCCSHHHHHHHHHHHHHHCCEEEC
T ss_pred CCCCchHHHHHHHHHHHcCCEEEe
Confidence 246778889999998874
No 12
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=99.77 E-value=2.6e-18 Score=145.01 Aligned_cols=127 Identities=17% Similarity=0.184 Sum_probs=96.7
Q ss_pred CCcchhhhcHHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---CC----
Q 030299 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---PI---- 92 (179)
Q Consensus 20 ~~~sRaa~KL~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---~~---- 92 (179)
.||||++|||.+|++++ +++++++||||||+|||||+|++.+.+ ...|+|+|+.... |.
T Consensus 74 ~y~SR~~~KL~ei~~~~-~l~~~~~VlDLGaapGGwsq~~~~~~g-------------v~~V~avdvG~~~he~P~~~~q 139 (321)
T 3lkz_A 74 HPVSRGTAKLRWLVERR-FLEPVGKVIDLGCGRGGWCYYMATQKR-------------VQEVRGYTKGGPGHEEPQLVQS 139 (321)
T ss_dssp CCSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTCHHHHHHTTCTT-------------EEEEEEECCCSTTSCCCCCCCB
T ss_pred CccchHHHHHHHHHHhc-CCCCCCEEEEeCCCCCcHHHHHHhhcC-------------CCEEEEEEcCCCCccCcchhhh
Confidence 39999999999999995 568999999999999999999998875 3589999999862 21
Q ss_pred ---CCeeEEec-cccchhhHHHHHhhcCCCCccEEeeCCCCCCCCCCcccHHHHHHHH---HHHHHHH---H--------
Q 030299 93 ---EGVIQVQG-DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLI---LAVSIQF---F-------- 154 (179)
Q Consensus 93 ---~~v~~i~g-Di~~~~~~~~l~~~~~~~~~D~VlsD~~~~~~g~~~~d~~~q~~L~---~~AL~~~---~-------- 154 (179)
..|.+.++ |++..+ ..++|+|+||++ ..++....|+..+++.+ ...|..- |
T Consensus 140 l~w~lV~~~~~~Dv~~l~----------~~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY 208 (321)
T 3lkz_A 140 YGWNIVTMKSGVDVFYRP----------SECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPY 208 (321)
T ss_dssp TTGGGEEEECSCCTTSSC----------CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTT
T ss_pred cCCcceEEEeccCHhhCC----------CCCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCC
Confidence 35888887 997754 357999999999 88999888887766522 2222110 1
Q ss_pred ---HHHHHHHHHHhhceEEE
Q 030299 155 ---IYELVFCLRQLLQYVIL 171 (179)
Q Consensus 155 ---~~~~~~~~~~~f~~v~~ 171 (179)
+...+-.|++.|..+-+
T Consensus 209 ~~~v~e~l~~lq~~fgg~lv 228 (321)
T 3lkz_A 209 MPKVIEKMELLQRRYGGGLV 228 (321)
T ss_dssp SHHHHHHHHHHHHHHCCEEE
T ss_pred ChHHHHHHHHHHHHhCCEeE
Confidence 23566666777776655
No 13
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.77 E-value=3.6e-17 Score=123.05 Aligned_cols=141 Identities=31% Similarity=0.402 Sum_probs=111.6
Q ss_pred CCcchhhhcHHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCeeEEe
Q 030299 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQ 99 (179)
Q Consensus 20 ~~~sRaa~KL~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v~~i~ 99 (179)
+|++|++++|.++.+.+..++++.+|||+|||+|.++..++++.++ ...|+|+|++++...+++.+++
T Consensus 1 ~y~~r~~~~l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~------------~~~v~~~D~~~~~~~~~~~~~~ 68 (180)
T 1ej0_A 1 GLRSRAWFKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGG------------KGRIIACDLLPMDPIVGVDFLQ 68 (180)
T ss_dssp CCSCHHHHHHHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCT------------TCEEEEEESSCCCCCTTEEEEE
T ss_pred CcchhHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCC------------CCeEEEEECccccccCcEEEEE
Confidence 6899999999999999998899999999999999999999998742 4799999999976678999999
Q ss_pred ccccchhhHHHHHhhcCCCCccEEeeCCCCCCCCCCcccHHHHHHHHHHHHHHHH------------------HHHHHHH
Q 030299 100 GDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAVSIQFF------------------IYELVFC 161 (179)
Q Consensus 100 gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~~~~g~~~~d~~~q~~L~~~AL~~~~------------------~~~~~~~ 161 (179)
+|+.+.+..+.+...+++.+||+|++++.+...+.+..++.....+....+..+. ...++..
T Consensus 69 ~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~ 148 (180)
T 1ej0_A 69 GDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLRE 148 (180)
T ss_dssp SCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHH
T ss_pred cccccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHH
Confidence 9999876545554445667899999999888888777776655555444444321 1345566
Q ss_pred HHHhhceEEEe
Q 030299 162 LRQLLQYVILD 172 (179)
Q Consensus 162 ~~~~f~~v~~~ 172 (179)
+++.|+.+.+.
T Consensus 149 ~~~~~~~~~~~ 159 (180)
T 1ej0_A 149 IRSLFTKVKVR 159 (180)
T ss_dssp HHHHEEEEEEE
T ss_pred HHHhhhhEEee
Confidence 77788888764
No 14
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.75 E-value=2.4e-18 Score=144.02 Aligned_cols=126 Identities=22% Similarity=0.253 Sum_probs=95.7
Q ss_pred hCCcchhhhcHHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------CCC
Q 030299 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------API 92 (179)
Q Consensus 19 ~~~~sRaa~KL~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~------~~~ 92 (179)
..|++|+++||.+++++ .+++++.+|||||||||+||++++++ ++|+|+|+++| .+.
T Consensus 61 ~~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcGtG~~s~~la~~----------------~~V~gVD~s~m~~~a~~~~~ 123 (276)
T 2wa2_A 61 GHAVSRGTAKLAWIDER-GGVELKGTVVDLGCGRGSWSYYAASQ----------------PNVREVKAYTLGTSGHEKPR 123 (276)
T ss_dssp ----CHHHHHHHHHHHT-TSCCCCEEEEEESCTTCHHHHHHHTS----------------TTEEEEEEECCCCTTSCCCC
T ss_pred CCcCchHHHHHHHHHHc-CCCCCCCEEEEeccCCCHHHHHHHHc----------------CCEEEEECchhhhhhhhchh
Confidence 35899999999999988 77789999999999999999999876 36999999998 344
Q ss_pred C------CeeEE--eccccchhhHHHHHhhcCCCCccEEeeCCCCCCCCCCcccHHHHHHHH---HHHHH--H--HH---
Q 030299 93 E------GVIQV--QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLI---LAVSI--Q--FF--- 154 (179)
Q Consensus 93 ~------~v~~i--~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~~~~g~~~~d~~~q~~L~---~~AL~--~--~~--- 154 (179)
. ++.++ ++|+++. ++.+||+|+||++ +.++.+..|+..++..+ ...|+ - .|
T Consensus 124 ~~~~~~~~v~~~~~~~D~~~l----------~~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 124 LVETFGWNLITFKSKVDVTKM----------EPFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp CCCCTTGGGEEEECSCCGGGC----------CCCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred hhhhcCCCeEEEeccCcHhhC----------CCCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 4 78999 9999873 3468999999999 88888877776554422 22232 1 11
Q ss_pred --------HHHHHHHHHHhhceEEEe
Q 030299 155 --------IYELVFCLRQLLQYVILD 172 (179)
Q Consensus 155 --------~~~~~~~~~~~f~~v~~~ 172 (179)
+..++..+.+.|..|.+.
T Consensus 193 ~~~~~~~~~~~~l~~l~~~f~~v~v~ 218 (276)
T 2wa2_A 193 VLNPYSCDVLEALMKMQARFGGGLIR 218 (276)
T ss_dssp ESCCCSHHHHHHHHHHHHHHCCEEEC
T ss_pred eCCCCchhHHHHHHHHHHHcCCEEEE
Confidence 236677888889888774
No 15
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=99.53 E-value=1.9e-14 Score=121.59 Aligned_cols=109 Identities=18% Similarity=0.111 Sum_probs=86.0
Q ss_pred CCCCEEEEEcc------CCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCeeEEeccccchhhHHHHHh
Q 030299 40 EGVKRVVDLCA------APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 40 ~~g~~VlDLga------gpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
.-|++|||||| +||+| ++.+. .+ .++.|+++|+.|+....++ +++||.+...
T Consensus 108 p~gmrVLDLGA~s~kg~APGS~--VLr~~-~p-----------~g~~VVavDL~~~~sda~~-~IqGD~~~~~------- 165 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGTA--VLRQW-LP-----------TGTLLVDSDLNDFVSDADS-TLIGDCATVH------- 165 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHHH--HHHHH-SC-----------TTCEEEEEESSCCBCSSSE-EEESCGGGEE-------
T ss_pred cCCCEEEeCCCCCCCCCCCcHH--HHHHh-CC-----------CCcEEEEeeCcccccCCCe-EEEccccccc-------
Confidence 34899999997 99994 44444 42 1369999999999876675 5999987643
Q ss_pred hcCCCCccEEeeCCCCCCCCCCcccHHHHHHHHHHHHHHHH---------H--------HHHHHHHHHhhceEEEe
Q 030299 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAVSIQFF---------I--------YELVFCLRQLLQYVILD 172 (179)
Q Consensus 114 ~~~~~~~D~VlsD~~~~~~g~~~~d~~~q~~L~~~AL~~~~---------~--------~~~~~~~~~~f~~v~~~ 172 (179)
.+.+||+|+|||+|+.+|+.+.++..+..|++.||.++- + ...++.+.+.|++|.+-
T Consensus 166 --~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~~~L~~lrk~F~~VK~f 239 (344)
T 3r24_A 166 --TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAF 239 (344)
T ss_dssp --ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEE
T ss_pred --cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCHHHHHHHHhhCCeEEEE
Confidence 247899999999999999988888778889988888652 1 45678888999999864
No 16
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.36 E-value=9.6e-13 Score=107.64 Aligned_cols=92 Identities=16% Similarity=0.127 Sum_probs=71.7
Q ss_pred CCcchhhhcHHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------
Q 030299 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------- 90 (179)
Q Consensus 20 ~~~sRaa~KL~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~--------- 90 (179)
-++++.+-+|++..+.+. +++|++|||||||||++|.++++.+++ .++|+|+|+++..
T Consensus 56 ~~~skla~~ll~~l~~~~-l~~g~~VLDlG~GtG~~t~~la~~v~~------------~G~V~avD~s~~~l~~l~~~a~ 122 (232)
T 3id6_C 56 AFRSKLAGAILKGLKTNP-IRKGTKVLYLGAASGTTISHVSDIIEL------------NGKAYGVEFSPRVVRELLLVAQ 122 (232)
T ss_dssp TTTCHHHHHHHTTCSCCS-CCTTCEEEEETCTTSHHHHHHHHHHTT------------TSEEEEEECCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhhhhcC-CCCCCEEEEEeecCCHHHHHHHHHhCC------------CCEEEEEECcHHHHHHHHHHhh
Confidence 368888888876544343 489999999999999999999999874 6899999999831
Q ss_pred CCCCeeEEeccccchhhHHHHHhhcCCCCccEEeeCCCC
Q 030299 91 PIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 91 ~~~~v~~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
...|+.++++|++.++... .+ .+.||+|++|+++
T Consensus 123 ~r~nv~~i~~Da~~~~~~~----~~-~~~~D~I~~d~a~ 156 (232)
T 3id6_C 123 RRPNIFPLLADARFPQSYK----SV-VENVDVLYVDIAQ 156 (232)
T ss_dssp HCTTEEEEECCTTCGGGTT----TT-CCCEEEEEECCCC
T ss_pred hcCCeEEEEcccccchhhh----cc-ccceEEEEecCCC
Confidence 2369999999998764311 12 3589999999874
No 17
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.29 E-value=4.3e-12 Score=106.96 Aligned_cols=110 Identities=19% Similarity=0.141 Sum_probs=82.1
Q ss_pred CCCCCCEEEEEcc------CCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCeeE-EeccccchhhHHH
Q 030299 38 IFEGVKRVVDLCA------APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQ-VQGDITNARTAEV 110 (179)
Q Consensus 38 ll~~g~~VlDLga------gpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v~~-i~gDi~~~~~~~~ 110 (179)
.+++|.+|||||| |||+ .+++++.+. .++|+|+|+++. ++++++ +++|+++.+
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~------------~~~V~gvDis~~--v~~v~~~i~gD~~~~~---- 119 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPT------------GTLLVDSDLNDF--VSDADSTLIGDCATVH---- 119 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCT------------TCEEEEEESSCC--BCSSSEEEESCGGGCC----
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCC------------CCEEEEEECCCC--CCCCEEEEECccccCC----
Confidence 3588999999999 7788 777777753 589999999998 679999 999999864
Q ss_pred HHhhcCCCCccEEeeCCCCCCCCCCcccHHHHHHHHHHHHHHHH------------------HHHHHHHHHHh-hceEEE
Q 030299 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAVSIQFF------------------IYELVFCLRQL-LQYVIL 171 (179)
Q Consensus 111 l~~~~~~~~~D~VlsD~~~~~~g~~~~d~~~q~~L~~~AL~~~~------------------~~~~~~~~~~~-f~~v~~ 171 (179)
+ ..+||+|+||+.++.+|.+..++..+..++..++..+. ...+...+++. |+.|.+
T Consensus 120 ----~-~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~ 194 (290)
T 2xyq_A 120 ----T-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFV 194 (290)
T ss_dssp ----C-SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEE
T ss_pred ----c-cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEE
Confidence 2 25799999999998889888776555555555554321 14566778888 888887
Q ss_pred e
Q 030299 172 D 172 (179)
Q Consensus 172 ~ 172 (179)
.
T Consensus 195 ~ 195 (290)
T 2xyq_A 195 T 195 (290)
T ss_dssp E
T ss_pred E
Confidence 5
No 18
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.27 E-value=2.1e-11 Score=102.83 Aligned_cols=92 Identities=18% Similarity=0.186 Sum_probs=70.3
Q ss_pred hCCcchhhhcHHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-C-----CC
Q 030299 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-A-----PI 92 (179)
Q Consensus 19 ~~~~sRaa~KL~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-~-----~~ 92 (179)
..|.||+++||.++.+.+.+-.+|.+|||||||||++|..++++ + ..+|+|+|+++. - ..
T Consensus 63 ~~yvsrg~~Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~-g-------------a~~V~aVDvs~~mL~~a~r~~ 128 (291)
T 3hp7_A 63 LRYVSRGGLKLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQN-G-------------AKLVYAVDVGTNQLVWKLRQD 128 (291)
T ss_dssp CCSSSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-T-------------CSEEEEECSSSSCSCHHHHTC
T ss_pred cccccchHHHHHHHHHhcCCCccccEEEecCCCccHHHHHHHhC-C-------------CCEEEEEECCHHHHHHHHHhC
Confidence 46999999999999999988678899999999999999999887 3 369999999983 2 12
Q ss_pred CCeeEE-eccccchhhHHHHHhhcCCCCccEEeeCCCC
Q 030299 93 EGVIQV-QGDITNARTAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 93 ~~v~~i-~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
+.+... ..|+..... ..++...||+|++|.++
T Consensus 129 ~rv~~~~~~ni~~l~~-----~~l~~~~fD~v~~d~sf 161 (291)
T 3hp7_A 129 DRVRSMEQYNFRYAEP-----VDFTEGLPSFASIDVSF 161 (291)
T ss_dssp TTEEEECSCCGGGCCG-----GGCTTCCCSEEEECCSS
T ss_pred cccceecccCceecch-----hhCCCCCCCEEEEEeeH
Confidence 444333 456655432 12444459999999875
No 19
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.13 E-value=1.7e-10 Score=94.49 Aligned_cols=73 Identities=16% Similarity=0.117 Sum_probs=61.0
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CCCCCeeEEeccccchhhHH
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------APIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~~~~~v~~i~gDi~~~~~~~ 109 (179)
++||++|||||||+|.++.++++.+++ .++|+|+|+++. ...+|+..+.+|..+++..
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~------------~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~- 141 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGP------------RGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKY- 141 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCT------------TCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGG-
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCC------------CceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCcccc-
Confidence 599999999999999999999999975 799999999982 2357999999999887532
Q ss_pred HHHhhcCCCCccEEeeCCC
Q 030299 110 VVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~ 128 (179)
.+....+|+|++|..
T Consensus 142 ----~~~~~~vDvVf~d~~ 156 (233)
T 4df3_A 142 ----RHLVEGVDGLYADVA 156 (233)
T ss_dssp ----TTTCCCEEEEEECCC
T ss_pred ----ccccceEEEEEEecc
Confidence 123468999999865
No 20
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.10 E-value=3e-10 Score=95.91 Aligned_cols=76 Identities=20% Similarity=0.206 Sum_probs=62.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~ 108 (179)
++|.+|||+|||||++|..++++++. .+.|+|+|+++.. .+++++++++|+.+...
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~------------~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~- 183 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRN------------DGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE- 183 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTT------------CSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG-
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCC------------CCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc-
Confidence 67899999999999999999998753 5899999999831 34689999999988642
Q ss_pred HHHHhhcCCCCccEEeeCCCCCCCCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGAPDVTGLH 135 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~~~~~g~~ 135 (179)
. ...||+|++|.+|+..|..
T Consensus 184 ------~-~~~fD~Il~d~Pcsg~g~~ 203 (315)
T 1ixk_A 184 ------L-NVEFDKILLDAPCTGSGTI 203 (315)
T ss_dssp ------G-CCCEEEEEEECCTTSTTTC
T ss_pred ------c-cccCCEEEEeCCCCCcccc
Confidence 1 3579999999998888864
No 21
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.07 E-value=2.9e-10 Score=101.63 Aligned_cols=76 Identities=22% Similarity=0.166 Sum_probs=62.4
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~~ 109 (179)
+|.+|||+|||||++|..++++++. .+.|+|+|+++.. .+.++.++++|+.+...
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~------------~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~-- 182 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNN------------EGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGA-- 182 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTT------------CSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHH--
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCC------------CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhh--
Confidence 8899999999999999999999853 5899999999831 35689999999987542
Q ss_pred HHHhhcCCCCccEEeeCCCCCCCCCC
Q 030299 110 VVIRHFDGCKADLVVCDGAPDVTGLH 135 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~~~~~g~~ 135 (179)
.....||.|++|.+|+..|..
T Consensus 183 -----~~~~~fD~Il~D~PcSg~G~~ 203 (479)
T 2frx_A 183 -----AVPEMFDAILLDAPCSGEGVV 203 (479)
T ss_dssp -----HSTTCEEEEEEECCCCCGGGG
T ss_pred -----hccccCCEEEECCCcCCcccc
Confidence 123579999999998877763
No 22
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.05 E-value=2.5e-10 Score=101.57 Aligned_cols=78 Identities=26% Similarity=0.344 Sum_probs=63.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~ 108 (179)
++|.+|||+|||||++|..++++++. .+.|+|+|+++.. .+.++.++++|..+...
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~------------~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~- 170 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKG------------KGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVP- 170 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTT------------CSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHH-
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCC------------CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhh-
Confidence 67899999999999999999999863 5899999999831 35678888999877532
Q ss_pred HHHHhhcCCCCccEEeeCCCCCCCCCCc
Q 030299 109 EVVIRHFDGCKADLVVCDGAPDVTGLHD 136 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~~~~~g~~~ 136 (179)
.+ .+.||+|++|.+|+..|.+.
T Consensus 171 -----~~-~~~FD~Il~DaPCSg~G~~r 192 (456)
T 3m4x_A 171 -----HF-SGFFDRIVVDAPCSGEGMFR 192 (456)
T ss_dssp -----HH-TTCEEEEEEECCCCCGGGTT
T ss_pred -----hc-cccCCEEEECCCCCCccccc
Confidence 12 35899999999999888743
No 23
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.05 E-value=4e-10 Score=95.45 Aligned_cols=78 Identities=21% Similarity=0.210 Sum_probs=60.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~ 108 (179)
++|.+|||+|||||++|..+++.++. .++|+|+|+++.. .+.+++++++|+.+....
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~------------~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~ 168 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKN------------QGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPS 168 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTT------------CSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTT
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCC------------CCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCcc
Confidence 67899999999999999999998853 5899999999831 346899999999875321
Q ss_pred HHHHhhcC-CCCccEEeeCCCCCCCCCC
Q 030299 109 EVVIRHFD-GCKADLVVCDGAPDVTGLH 135 (179)
Q Consensus 109 ~~l~~~~~-~~~~D~VlsD~~~~~~g~~ 135 (179)
.. ...||.|++|.+|+.+|.+
T Consensus 169 ------~~~~~~fD~Vl~D~PcSg~G~~ 190 (309)
T 2b9e_A 169 ------DPRYHEVHYILLDPSCSGSGMP 190 (309)
T ss_dssp ------CGGGTTEEEEEECCCCCC----
T ss_pred ------ccccCCCCEEEEcCCcCCCCCC
Confidence 00 1469999999999988874
No 24
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.03 E-value=2.8e-10 Score=90.86 Aligned_cols=91 Identities=19% Similarity=0.162 Sum_probs=68.1
Q ss_pred CCcchhhhcHHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----C----
Q 030299 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----A---- 90 (179)
Q Consensus 20 ~~~sRaa~KL~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----~---- 90 (179)
.++++.+.++.+..+.+. ++++.+|||+|||+|.++..++++.++ .++|+|+|+++. .
T Consensus 57 ~~~~~~~~~~~~~l~~~~-~~~~~~vLDlG~G~G~~~~~la~~~g~------------~~~v~gvD~s~~~i~~~~~~a~ 123 (233)
T 2ipx_A 57 PFRSKLAAAILGGVDQIH-IKPGAKVLYLGAASGTTVSHVSDIVGP------------DGLVYAVEFSHRSGRDLINLAK 123 (233)
T ss_dssp TTTCHHHHHHHTTCSCCC-CCTTCEEEEECCTTSHHHHHHHHHHCT------------TCEEEEECCCHHHHHHHHHHHH
T ss_pred ccchhHHHHHHhHHheec-CCCCCEEEEEcccCCHHHHHHHHHhCC------------CcEEEEEECCHHHHHHHHHHhh
Confidence 356777777765433443 478899999999999999999999743 479999999962 1
Q ss_pred CCCCeeEEeccccchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 91 PIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 91 ~~~~v~~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
..++++++++|+.+..... +....||+|++|.+
T Consensus 124 ~~~~v~~~~~d~~~~~~~~-----~~~~~~D~V~~~~~ 156 (233)
T 2ipx_A 124 KRTNIIPVIEDARHPHKYR-----MLIAMVDVIFADVA 156 (233)
T ss_dssp HCTTEEEECSCTTCGGGGG-----GGCCCEEEEEECCC
T ss_pred ccCCeEEEEcccCChhhhc-----ccCCcEEEEEEcCC
Confidence 1378999999998853210 22468999999875
No 25
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.00 E-value=5.4e-10 Score=92.22 Aligned_cols=80 Identities=18% Similarity=0.251 Sum_probs=59.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~ 108 (179)
++|.+|||+|||||++|..+++.++. .+.|+|+|+++.. ..++++++++|+.+....
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~------------~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~ 149 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKN------------KGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDY 149 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTT------------CSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHH
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCC------------CCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchh
Confidence 57899999999999999999998752 4899999999831 245899999999875421
Q ss_pred HHHHhhcCCCCccEEeeCCCCCCCCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGAPDVTGLH 135 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~~~~~g~~ 135 (179)
+. .....||+|++|.+++..|.+
T Consensus 150 --~~--~~~~~fD~Vl~d~Pcs~~g~~ 172 (274)
T 3ajd_A 150 --LL--KNEIFFDKILLDAPCSGNIIK 172 (274)
T ss_dssp --HH--HTTCCEEEEEEEECCC-----
T ss_pred --hh--hccccCCEEEEcCCCCCCccc
Confidence 00 023579999999988877764
No 26
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.99 E-value=3.2e-10 Score=101.13 Aligned_cols=76 Identities=22% Similarity=0.232 Sum_probs=61.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~ 108 (179)
++|.+|||+|||||++|..++++++. .+.|+|+|+++.. .+. +.++++|+++...
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~------------~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~- 165 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGG------------KGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAE- 165 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTT------------CSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHH-
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCC------------CCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhh-
Confidence 67899999999999999999999863 5899999999831 244 8888999877532
Q ss_pred HHHHhhcCCCCccEEeeCCCCCCCCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGAPDVTGLH 135 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~~~~~g~~ 135 (179)
.+ .+.||+|++|.+|+.+|..
T Consensus 166 -----~~-~~~FD~Il~D~PcSg~G~~ 186 (464)
T 3m6w_A 166 -----AF-GTYFHRVLLDAPCSGEGMF 186 (464)
T ss_dssp -----HH-CSCEEEEEEECCCCCGGGT
T ss_pred -----hc-cccCCEEEECCCcCCcccc
Confidence 12 3589999999999888764
No 27
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.95 E-value=1.3e-09 Score=96.18 Aligned_cols=78 Identities=28% Similarity=0.233 Sum_probs=63.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~ 108 (179)
++|.+|||+|||||++|..+++.++. .+.|+|+|+++.. .+.++.++++|+.+...
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~------------~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~- 324 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKN------------KGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPE- 324 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTT------------CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSS-
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCC------------CCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcch-
Confidence 67899999999999999999998852 4899999999831 35689999999987531
Q ss_pred HHHHhhcCCCCccEEeeCCCCCCCCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGAPDVTGLH 135 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~~~~~g~~ 135 (179)
.+++..||+|++|.+|+..|.+
T Consensus 325 -----~~~~~~fD~Vl~D~Pcsg~g~~ 346 (450)
T 2yxl_A 325 -----IIGEEVADKVLLDAPCTSSGTI 346 (450)
T ss_dssp -----SSCSSCEEEEEEECCCCCGGGT
T ss_pred -----hhccCCCCEEEEcCCCCCCeee
Confidence 1344679999999999888864
No 28
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.94 E-value=1.3e-09 Score=86.78 Aligned_cols=71 Identities=23% Similarity=0.194 Sum_probs=55.8
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----C----CCCCeeEEeccccchhhHH
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----A----PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----~----~~~~v~~i~gDi~~~~~~~ 109 (179)
+++|.+|||||||||.++..++++.+ .+.|+|+|+++. . ...|+.++.+|+.+....
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~-------------~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~- 120 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVD-------------EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKY- 120 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTT-------------TSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGT-
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcC-------------CCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhh-
Confidence 47899999999999999999999875 479999999982 1 246899999999875310
Q ss_pred HHHhhcCCCCccEEeeCC
Q 030299 110 VVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~ 127 (179)
..+. +.||+|+++.
T Consensus 121 ---~~~~-~~fD~V~~~~ 134 (210)
T 1nt2_A 121 ---SGIV-EKVDLIYQDI 134 (210)
T ss_dssp ---TTTC-CCEEEEEECC
T ss_pred ---cccc-cceeEEEEec
Confidence 0123 5899999985
No 29
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.93 E-value=4.9e-09 Score=81.05 Aligned_cols=72 Identities=17% Similarity=0.181 Sum_probs=57.9
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~ 106 (179)
++++.+|||+|||+|.++..++++.++ .+.|+|+|+++.. .. ++++++++|+.+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 87 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGE------------NGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD 87 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCT------------TCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCC------------CCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh
Confidence 478899999999999999999999753 4799999999831 12 57999999998764
Q ss_pred hHHHHHhhcCCCCccEEeeCCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
. +.+++||+|+++.+.
T Consensus 88 ~-------~~~~~fD~v~~~~~~ 103 (197)
T 3eey_A 88 K-------YIDCPVKAVMFNLGY 103 (197)
T ss_dssp G-------TCCSCEEEEEEEESB
T ss_pred h-------hccCCceEEEEcCCc
Confidence 2 234689999999753
No 30
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.92 E-value=1.8e-09 Score=88.89 Aligned_cols=67 Identities=13% Similarity=0.071 Sum_probs=55.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----CCCCCeeEEeccccchhhHHHHHhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----APIEGVIQVQGDITNARTAEVVIRH 114 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----~~~~~v~~i~gDi~~~~~~~~l~~~ 114 (179)
..+.+|||||||+|.++..++++. .+|+|+|+++. ...+++.++++|+.+.+
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~---------------~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~-------- 94 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF---------------ERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTG-------- 94 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC---------------SEEEEEESCHHHHHTCCCCTTEEEEECCTTCCC--------
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC---------------CEEEEEeCcHHhhhhhhhcCCceeehhhhhhhc--------
Confidence 456799999999999999998763 68999999982 24679999999998875
Q ss_pred cCCCCccEEeeCCCC
Q 030299 115 FDGCKADLVVCDGAP 129 (179)
Q Consensus 115 ~~~~~~D~VlsD~~~ 129 (179)
++++.||+|++..+.
T Consensus 95 ~~~~sfD~v~~~~~~ 109 (257)
T 4hg2_A 95 LPPASVDVAIAAQAM 109 (257)
T ss_dssp CCSSCEEEEEECSCC
T ss_pred ccCCcccEEEEeeeh
Confidence 567899999996643
No 31
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.90 E-value=2.3e-09 Score=87.00 Aligned_cols=57 Identities=21% Similarity=0.324 Sum_probs=50.5
Q ss_pred hCCcchhhhcHHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC
Q 030299 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM 89 (179)
Q Consensus 19 ~~~~sRaa~KL~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~ 89 (179)
..|.||+.+||..+.+.+.+-.++.+|||||||+|+++..++++ + ..+|+|+|+++.
T Consensus 15 ~~yvsrg~~kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~-g-------------~~~V~gvDis~~ 71 (232)
T 3opn_A 15 LRYVSRGGLKLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQN-G-------------AKLVYALDVGTN 71 (232)
T ss_dssp CCSSSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-T-------------CSEEEEECSSCC
T ss_pred CCccCCcHHHHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhc-C-------------CCEEEEEcCCHH
Confidence 46999999999999999987667889999999999999999987 3 259999999983
No 32
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.89 E-value=2.2e-09 Score=92.92 Aligned_cols=93 Identities=25% Similarity=0.202 Sum_probs=68.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------------CCCCeeEEeccc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------------PIEGVIQVQGDI 102 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------------~~~~v~~i~gDi 102 (179)
+||++|||+||||||.|..+++.+. .+.|+|+|+++.. ...++.....|.
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~-------------~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~ 213 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGC-------------CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDG 213 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTC-------------EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCG
T ss_pred CCCCEEEEecCCccHHHHHHHHhcC-------------CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCch
Confidence 6799999999999999999998764 4789999999831 013677778887
Q ss_pred cchhhHHHHHhhcCCCCccEEeeCCCCCCCCCC----ccc-------------HHHHHHHHHHHHHH
Q 030299 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLH----DMD-------------EFVQSQLILAVSIQ 152 (179)
Q Consensus 103 ~~~~~~~~l~~~~~~~~~D~VlsD~~~~~~g~~----~~d-------------~~~q~~L~~~AL~~ 152 (179)
+.... .....||.||.|.+|+.+|.+ +.+ ..+|.+|+..|+..
T Consensus 214 ~~~~~-------~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~ 273 (359)
T 4fzv_A 214 RKWGE-------LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLA 273 (359)
T ss_dssp GGHHH-------HSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHT
T ss_pred hhcch-------hccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhc
Confidence 76532 234689999999999876321 111 24577777777763
No 33
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.88 E-value=5.1e-09 Score=91.71 Aligned_cols=77 Identities=22% Similarity=0.248 Sum_probs=61.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----------CCCeeEEeccccchhhHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAE 109 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~----------~~~v~~i~gDi~~~~~~~ 109 (179)
++|.+|||+|||||++|..+++.++ .+.|+|+|+++..- -.++.++++|+.+...
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~-------------~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~-- 309 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAP-------------EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQ-- 309 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCT-------------TCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHH--
T ss_pred CCcCeEEEECCCchHHHHHHHHHcC-------------CCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchh--
Confidence 6789999999999999999999875 48999999998520 1247888999988642
Q ss_pred HHHhhcCCCCccEEeeCCCCCCCCCC
Q 030299 110 VVIRHFDGCKADLVVCDGAPDVTGLH 135 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~~~~~g~~ 135 (179)
.+++..||+|++|.+|+..|..
T Consensus 310 ----~~~~~~fD~Vl~D~Pcsg~g~~ 331 (429)
T 1sqg_A 310 ----WCGEQQFDRILLDAPCSATGVI 331 (429)
T ss_dssp ----HHTTCCEEEEEEECCCCCGGGT
T ss_pred ----hcccCCCCEEEEeCCCCccccc
Confidence 1344689999999999888764
No 34
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.87 E-value=4.1e-09 Score=85.60 Aligned_cols=81 Identities=17% Similarity=0.186 Sum_probs=62.9
Q ss_pred hcHHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCCCCe
Q 030299 27 FKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------APIEGV 95 (179)
Q Consensus 27 ~KL~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~~~~~v 95 (179)
-.+.++......+.++.+|||||||+|.++..++++.+ ...|+|+|+++. ...+++
T Consensus 23 ~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~ 89 (276)
T 3mgg_A 23 ETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNP-------------DAEITSIDISPESLEKARENTEKNGIKNV 89 (276)
T ss_dssp CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCT-------------TSEEEEEESCHHHHHHHHHHHHHTTCCSE
T ss_pred HHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCC-------------CCEEEEEECCHHHHHHHHHHHHHcCCCCc
Confidence 33444444444568899999999999999999999864 579999999983 124689
Q ss_pred eEEeccccchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 96 IQVQGDITNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 96 ~~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
.++++|+.+.+ +++++||+|++...
T Consensus 90 ~~~~~d~~~~~--------~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 90 KFLQANIFSLP--------FEDSSFDHIFVCFV 114 (276)
T ss_dssp EEEECCGGGCC--------SCTTCEEEEEEESC
T ss_pred EEEEcccccCC--------CCCCCeeEEEEech
Confidence 99999999864 35678999999764
No 35
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.85 E-value=4.9e-09 Score=86.36 Aligned_cols=68 Identities=26% Similarity=0.238 Sum_probs=55.1
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------C-CCCCeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------A-PIEGVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~-~~~~v~~i~gDi~~~~ 106 (179)
+++|.+|||||||+|.++..++++.+. ++.+|+|+|+++. . ...+|+++++|+.+.+
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~-----------~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~ 136 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHH-----------DNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA 136 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCS-----------SSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCC-----------CCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc
Confidence 689999999999999999999998752 2579999999982 0 1247999999998854
Q ss_pred hHHHHHhhcCCCCccEEeeCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~ 127 (179)
.+.+|+|++..
T Consensus 137 ----------~~~~d~v~~~~ 147 (261)
T 4gek_A 137 ----------IENASMVVLNF 147 (261)
T ss_dssp ----------CCSEEEEEEES
T ss_pred ----------ccccccceeee
Confidence 24699999864
No 36
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.85 E-value=6.3e-09 Score=84.44 Aligned_cols=66 Identities=18% Similarity=0.121 Sum_probs=54.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----CCCCCeeEEeccccchhhHHHHHhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----APIEGVIQVQGDITNARTAEVVIRH 114 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----~~~~~v~~i~gDi~~~~~~~~l~~~ 114 (179)
.++.+|||||||+|.|+..+++. ...|+|+|+++. ....+++++++|+.+.+
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~---------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~-------- 89 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQ---------------GLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLA-------- 89 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTT---------------TCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCC--------
T ss_pred CCCCEEEEEcCcccHHHHHHHhC---------------CCEEEEEeCCHHHHHHHHhccCCEEEECchhhCC--------
Confidence 67899999999999999999872 479999999983 12348999999998864
Q ss_pred cCCCCccEEeeCCC
Q 030299 115 FDGCKADLVVCDGA 128 (179)
Q Consensus 115 ~~~~~~D~VlsD~~ 128 (179)
+++++||+|++...
T Consensus 90 ~~~~~fD~v~~~~~ 103 (261)
T 3ege_A 90 LPDKSVDGVISILA 103 (261)
T ss_dssp SCTTCBSEEEEESC
T ss_pred CCCCCEeEEEEcch
Confidence 45678999999765
No 37
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.84 E-value=3.4e-09 Score=81.19 Aligned_cols=68 Identities=18% Similarity=0.139 Sum_probs=54.3
Q ss_pred CCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchh
Q 030299 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNAR 106 (179)
Q Consensus 38 ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~ 106 (179)
.++++.+|||+|||+|.++..++++ + .+|+|+|+++.. ..++++++++|..+..
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~-~--------------~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~ 83 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL-S--------------KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLD 83 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT-S--------------SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGG
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh-C--------------CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHH
Confidence 3578999999999999999999887 3 799999999831 2468999998877643
Q ss_pred hHHHHHhhcCCCCccEEeeCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~ 127 (179)
. +.+++||+|+++.
T Consensus 84 ~-------~~~~~fD~v~~~~ 97 (185)
T 3mti_A 84 H-------YVREPIRAAIFNL 97 (185)
T ss_dssp G-------TCCSCEEEEEEEE
T ss_pred h-------hccCCcCEEEEeC
Confidence 1 2356899999884
No 38
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.83 E-value=8.8e-09 Score=80.59 Aligned_cols=79 Identities=16% Similarity=0.175 Sum_probs=61.6
Q ss_pred HHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeE
Q 030299 29 LLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQ 97 (179)
Q Consensus 29 L~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~ 97 (179)
...+.+... +.++.+|||+|||+|.++..++++.++ ...|+|+|+++.. ..+++++
T Consensus 26 ~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~ 92 (219)
T 3dh0_A 26 PEKVLKEFG-LKEGMTVLDVGTGAGFYLPYLSKMVGE------------KGKVYAIDVQEEMVNYAWEKVNKLGLKNVEV 92 (219)
T ss_dssp HHHHHHHHT-CCTTCEEEESSCTTCTTHHHHHHHHTT------------TCEEEEEESCHHHHHHHHHHHHHHTCTTEEE
T ss_pred HHHHHHHhC-CCCCCEEEEEecCCCHHHHHHHHHhCC------------CcEEEEEECCHHHHHHHHHHHHHcCCCcEEE
Confidence 334444444 377889999999999999999998743 5799999999831 2458999
Q ss_pred EeccccchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 98 VQGDITNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 98 i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
+++|+.+.+ +++.+||+|++...
T Consensus 93 ~~~d~~~~~--------~~~~~fD~v~~~~~ 115 (219)
T 3dh0_A 93 LKSEENKIP--------LPDNTVDFIFMAFT 115 (219)
T ss_dssp EECBTTBCS--------SCSSCEEEEEEESC
T ss_pred EecccccCC--------CCCCCeeEEEeehh
Confidence 999998864 35678999999764
No 39
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.82 E-value=1.3e-08 Score=81.57 Aligned_cols=69 Identities=23% Similarity=0.325 Sum_probs=56.0
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~-~v~~i~gDi~~~~ 106 (179)
++++.+|||||||+|.++..++++.+ ..|+|+|+++.. .++ +++++++|+.+.+
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 109 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVK--------------GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP 109 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCC--------------SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCC--------------CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC
Confidence 46788999999999999999999864 499999999831 223 3999999998764
Q ss_pred hHHHHHhhcCCCCccEEeeCCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
+++++||+|++....
T Consensus 110 --------~~~~~fD~v~~~~~l 124 (257)
T 3f4k_A 110 --------FQNEELDLIWSEGAI 124 (257)
T ss_dssp --------SCTTCEEEEEEESCS
T ss_pred --------CCCCCEEEEEecChH
Confidence 355789999998754
No 40
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.82 E-value=1.5e-08 Score=81.06 Aligned_cols=68 Identities=19% Similarity=0.213 Sum_probs=56.2
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CCCCCeeEEeccccchhhHH
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------APIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~~~~~v~~i~gDi~~~~~~~ 109 (179)
++++.+|||+|||+|.++..++++.+ ..|+|+|+++. ...++++++++|+.+.+
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~--- 115 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYG--------------AHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKE--- 115 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--------------CEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCC---
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcC--------------CEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCC---
Confidence 36788999999999999999999863 69999999983 11268999999998864
Q ss_pred HHHhhcCCCCccEEeeCCC
Q 030299 110 VVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~ 128 (179)
+++++||+|++...
T Consensus 116 -----~~~~~fD~v~~~~~ 129 (266)
T 3ujc_A 116 -----FPENNFDLIYSRDA 129 (266)
T ss_dssp -----CCTTCEEEEEEESC
T ss_pred -----CCCCcEEEEeHHHH
Confidence 45678999999754
No 41
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.82 E-value=1.1e-08 Score=81.60 Aligned_cols=71 Identities=20% Similarity=0.254 Sum_probs=55.6
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CCCCCeeEEeccccchhhHH
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------APIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~~~~~v~~i~gDi~~~~~~~ 109 (179)
++++.+|||||||+|.++..++++.+ .+.|+|+|+++. ...+++.++.+|+.++...
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~- 137 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIAD-------------KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEY- 137 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTT-------------TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGG-
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcC-------------CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccc-
Confidence 46789999999999999999999875 479999999983 1236899999999874310
Q ss_pred HHHhhcCCCCccEEeeCC
Q 030299 110 VVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~ 127 (179)
..+. ..||+|+++.
T Consensus 138 ---~~~~-~~~D~v~~~~ 151 (230)
T 1fbn_A 138 ---ANIV-EKVDVIYEDV 151 (230)
T ss_dssp ---TTTS-CCEEEEEECC
T ss_pred ---cccC-ccEEEEEEec
Confidence 0123 5799999775
No 42
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.82 E-value=1.7e-08 Score=85.41 Aligned_cols=67 Identities=21% Similarity=0.340 Sum_probs=53.7
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~ 107 (179)
++++++|||||||||++|..++.+.. +++|+|+|+++.. .+.+++++++|+.+.+
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~-------------ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~- 185 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVY-------------GMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID- 185 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTT-------------CCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG-
T ss_pred CCCcCEEEEECCCccHHHHHHHHHcc-------------CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC-
Confidence 58899999999999999876655543 5899999999831 2468999999998742
Q ss_pred HHHHHhhcCCCCccEEeeCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~ 128 (179)
+.+||+|++++.
T Consensus 186 ---------d~~FDvV~~~a~ 197 (298)
T 3fpf_A 186 ---------GLEFDVLMVAAL 197 (298)
T ss_dssp ---------GCCCSEEEECTT
T ss_pred ---------CCCcCEEEECCC
Confidence 468999998754
No 43
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.82 E-value=1.1e-08 Score=82.36 Aligned_cols=76 Identities=24% Similarity=0.319 Sum_probs=57.9
Q ss_pred HHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCCCCeeE
Q 030299 29 LLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------APIEGVIQ 97 (179)
Q Consensus 29 L~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~~~~~v~~ 97 (179)
+..+.+...+ +++.+|||||||+|.++..++++. ..|+|+|+++. ...+++.+
T Consensus 26 ~~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~ 89 (260)
T 1vl5_A 26 LAKLMQIAAL-KGNEEVLDVATGGGHVANAFAPFV---------------KKVVAFDLTEDILKVARAFIEGNGHQQVEY 89 (260)
T ss_dssp HHHHHHHHTC-CSCCEEEEETCTTCHHHHHHGGGS---------------SEEEEEESCHHHHHHHHHHHHHTTCCSEEE
T ss_pred HHHHHHHhCC-CCCCEEEEEeCCCCHHHHHHHHhC---------------CEEEEEeCCHHHHHHHHHHHHhcCCCceEE
Confidence 3344444443 678899999999999999998763 58999999982 12468999
Q ss_pred EeccccchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 98 VQGDITNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 98 i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
+++|+.+.+ ++++.||+|++...
T Consensus 90 ~~~d~~~l~--------~~~~~fD~V~~~~~ 112 (260)
T 1vl5_A 90 VQGDAEQMP--------FTDERFHIVTCRIA 112 (260)
T ss_dssp EECCC-CCC--------SCTTCEEEEEEESC
T ss_pred EEecHHhCC--------CCCCCEEEEEEhhh
Confidence 999998864 45678999999754
No 44
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.81 E-value=2.4e-08 Score=79.06 Aligned_cols=73 Identities=23% Similarity=0.244 Sum_probs=57.3
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CCCCCeeEEeccccchhhHH
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------APIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~~~~~v~~i~gDi~~~~~~~ 109 (179)
+.++.+|||+|||+|.++..++++.++ .+.|+|+|+++. ...++++++++|+.+....
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~------------~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 137 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGW------------EGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEY- 137 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCT------------TSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGG-
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCC------------CeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchh-
Confidence 467899999999999999999998753 479999999982 1236899999999885321
Q ss_pred HHHhhcCCCCccEEeeCCC
Q 030299 110 VVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~ 128 (179)
..+ ..+||+|++|..
T Consensus 138 ---~~~-~~~~D~v~~~~~ 152 (227)
T 1g8a_A 138 ---RAL-VPKVDVIFEDVA 152 (227)
T ss_dssp ---TTT-CCCEEEEEECCC
T ss_pred ---hcc-cCCceEEEECCC
Confidence 012 247999999875
No 45
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.80 E-value=2.2e-08 Score=79.37 Aligned_cols=76 Identities=11% Similarity=0.082 Sum_probs=58.8
Q ss_pred hHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCCCCeeEEe
Q 030299 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------APIEGVIQVQ 99 (179)
Q Consensus 31 eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~~~~~v~~i~ 99 (179)
+..+.|. +++.+|||||||+|.++..++++.+ ...|+|+|+++. ..++|+.+++
T Consensus 30 ~~~~~f~--~~~~~vLDiGcG~G~~~~~la~~~p-------------~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~ 94 (213)
T 2fca_A 30 KWNTVFG--NDNPIHIEVGTGKGQFISGMAKQNP-------------DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLN 94 (213)
T ss_dssp CHHHHHT--SCCCEEEEECCTTSHHHHHHHHHCT-------------TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEEC
T ss_pred CHHHHcC--CCCceEEEEecCCCHHHHHHHHHCC-------------CCCEEEEEechHHHHHHHHHHHHcCCCCEEEEe
Confidence 3334454 5678999999999999999999865 579999999983 1356899999
Q ss_pred ccccchhhHHHHHhhcCCCCccEEeeCC
Q 030299 100 GDITNARTAEVVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 100 gDi~~~~~~~~l~~~~~~~~~D~VlsD~ 127 (179)
+|+.+... .+++..+|.|++..
T Consensus 95 ~d~~~l~~------~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 95 IDADTLTD------VFEPGEVKRVYLNF 116 (213)
T ss_dssp CCGGGHHH------HCCTTSCCEEEEES
T ss_pred CCHHHHHh------hcCcCCcCEEEEEC
Confidence 99987431 25567899998764
No 46
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.79 E-value=1.5e-08 Score=78.77 Aligned_cols=76 Identities=18% Similarity=0.103 Sum_probs=59.3
Q ss_pred HHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-------CCCCCeeEEecc
Q 030299 29 LLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-------APIEGVIQVQGD 101 (179)
Q Consensus 29 L~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-------~~~~~v~~i~gD 101 (179)
+..+.+...-+.++.+|||||||+|.++..++++ + .+|+|+|+++. ...++++++++|
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~-~--------------~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d 98 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGL-A--------------DRVTALDGSAEMIAEAGRHGLDNVEFRQQD 98 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH-S--------------SEEEEEESCHHHHHHHGGGCCTTEEEEECC
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc-C--------------CeEEEEeCCHHHHHHHHhcCCCCeEEEecc
Confidence 3344444554678889999999999999999987 3 68999999983 124689999999
Q ss_pred ccchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 102 ITNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 102 i~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
+.+. +++++||+|++...
T Consensus 99 ~~~~---------~~~~~~D~v~~~~~ 116 (218)
T 3ou2_A 99 LFDW---------TPDRQWDAVFFAHW 116 (218)
T ss_dssp TTSC---------CCSSCEEEEEEESC
T ss_pred cccC---------CCCCceeEEEEech
Confidence 9875 24578999999653
No 47
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.79 E-value=1.8e-08 Score=81.56 Aligned_cols=69 Identities=17% Similarity=0.278 Sum_probs=56.3
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~ 106 (179)
+.++.+|||||||+|.++..++++ + ...|+|+|+++.. .+ ++++++++|+.+.+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 109 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-V-------------TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP 109 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-C-------------SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-c-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC
Confidence 468899999999999999999987 4 4799999999841 12 46999999998864
Q ss_pred hHHHHHhhcCCCCccEEeeCCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
+++++||+|++.+..
T Consensus 110 --------~~~~~fD~i~~~~~~ 124 (267)
T 3kkz_A 110 --------FRNEELDLIWSEGAI 124 (267)
T ss_dssp --------CCTTCEEEEEESSCG
T ss_pred --------CCCCCEEEEEEcCCc
Confidence 345789999998754
No 48
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.78 E-value=1.9e-08 Score=83.10 Aligned_cols=66 Identities=14% Similarity=-0.007 Sum_probs=54.2
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~-~v~~i~gDi~~~~ 106 (179)
++++.+|||||||+|.++..++++.+ ..|+|+|+++.. .++ +++++.+|+.+.
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 134 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYD--------------VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF- 134 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--------------CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCC--------------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-
Confidence 37899999999999999999999874 689999999831 233 789999999763
Q ss_pred hHHHHHhhcCCCCccEEeeCCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
+++||+|++....
T Consensus 135 ----------~~~fD~v~~~~~~ 147 (302)
T 3hem_A 135 ----------DEPVDRIVSLGAF 147 (302)
T ss_dssp ----------CCCCSEEEEESCG
T ss_pred ----------CCCccEEEEcchH
Confidence 3689999997653
No 49
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.77 E-value=2.6e-08 Score=80.54 Aligned_cols=72 Identities=19% Similarity=0.224 Sum_probs=55.4
Q ss_pred CCCEEEEEccCCChHHHHHHHH---hCCCCCCCCCCCCCCCCeEEEEeCCCCC-----C-CCCeeEEeccccchhhHHHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRK---LYLPAKLSPDSREGDLPLIVAIDLQPMA-----P-IEGVIQVQGDITNARTAEVV 111 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~---~~~~~~~~~~~~~~~~~~VvavD~~~~~-----~-~~~v~~i~gDi~~~~~~~~l 111 (179)
++.+|||||||+|.++..+++. +.+ .++|+|+|+++.. . ..+++++++|+.+.+..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~------------~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l--- 145 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGI------------DCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTF--- 145 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTC------------CCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGG---
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCC------------CCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHH---
Confidence 5679999999999999999987 332 5899999999842 1 25799999999885221
Q ss_pred HhhcCCCCccEEeeCCC
Q 030299 112 IRHFDGCKADLVVCDGA 128 (179)
Q Consensus 112 ~~~~~~~~~D~VlsD~~ 128 (179)
....+.+||+|++|++
T Consensus 146 -~~~~~~~fD~I~~d~~ 161 (236)
T 2bm8_A 146 -EHLREMAHPLIFIDNA 161 (236)
T ss_dssp -GGGSSSCSSEEEEESS
T ss_pred -HhhccCCCCEEEECCc
Confidence 1123347999999876
No 50
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.77 E-value=4.2e-08 Score=79.69 Aligned_cols=74 Identities=22% Similarity=0.362 Sum_probs=56.9
Q ss_pred CC-CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CeeEEeccccch
Q 030299 39 FE-GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNA 105 (179)
Q Consensus 39 l~-~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~-~v~~i~gDi~~~ 105 (179)
++ ++.+|||+|||+|.++..++++.+ ..|+|+|+++.. +.. +++++++|+.+.
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~--------------~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~ 111 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTK--------------AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKI 111 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCC--------------CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGG
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcC--------------CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHh
Confidence 46 889999999999999999998742 499999999831 233 599999999986
Q ss_pred hhHHHHHhhcCCCCccEEeeCCCCCCC
Q 030299 106 RTAEVVIRHFDGCKADLVVCDGAPDVT 132 (179)
Q Consensus 106 ~~~~~l~~~~~~~~~D~VlsD~~~~~~ 132 (179)
.. .++..+||+|++|.+....
T Consensus 112 ~~------~~~~~~fD~Ii~npPy~~~ 132 (259)
T 3lpm_A 112 TD------LIPKERADIVTCNPPYFAT 132 (259)
T ss_dssp GG------TSCTTCEEEEEECCCC---
T ss_pred hh------hhccCCccEEEECCCCCCC
Confidence 42 2445789999999765443
No 51
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.77 E-value=1.1e-08 Score=78.99 Aligned_cols=69 Identities=16% Similarity=0.163 Sum_probs=54.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~ 108 (179)
.++.+|||||||+|.++..++.+ + ..+|+|+|+++.. ...+++++++|+.+...
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~- 107 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-G-------------AASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVA- 107 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T-------------CSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHH-
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-C-------------CCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHh-
Confidence 47889999999999999988775 3 3689999999831 24689999999987532
Q ss_pred HHHHhhcCCCCccEEeeCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~ 128 (179)
.+++.+||+|++|.+
T Consensus 108 -----~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 108 -----AGTTSPVDLVLADPP 122 (189)
T ss_dssp -----HCCSSCCSEEEECCC
T ss_pred -----hccCCCccEEEECCC
Confidence 234578999999865
No 52
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.76 E-value=4e-08 Score=79.52 Aligned_cols=80 Identities=15% Similarity=0.218 Sum_probs=58.1
Q ss_pred hHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-------C----------CC-
Q 030299 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-------A----------PI- 92 (179)
Q Consensus 31 eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-------~----------~~- 92 (179)
.+.+... ++++.+|||||||+|.++..++++.++ ...|+|+|+++. . ..
T Consensus 34 ~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~g~------------~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~ 100 (275)
T 3bkx_A 34 AIAEAWQ-VKPGEKILEIGCGQGDLSAVLADQVGS------------SGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLG 100 (275)
T ss_dssp HHHHHHT-CCTTCEEEEESCTTSHHHHHHHHHHCT------------TCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTG
T ss_pred HHHHHcC-CCCCCEEEEeCCCCCHHHHHHHHHhCC------------CCEEEEEECCccccccHHHHHHHHHHHHhcCCC
Confidence 3334444 378899999999999999999998743 479999999983 1 11
Q ss_pred CCeeEEecc-ccchhhHHHHHhhcCCCCccEEeeCCCC
Q 030299 93 EGVIQVQGD-ITNARTAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 93 ~~v~~i~gD-i~~~~~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
++++++++| +..... .+++++||+|++....
T Consensus 101 ~~v~~~~~d~~~~~~~------~~~~~~fD~v~~~~~l 132 (275)
T 3bkx_A 101 DRLTVHFNTNLSDDLG------PIADQHFDRVVLAHSL 132 (275)
T ss_dssp GGEEEECSCCTTTCCG------GGTTCCCSEEEEESCG
T ss_pred CceEEEECChhhhccC------CCCCCCEEEEEEccch
Confidence 478999998 433221 1345789999987653
No 53
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.76 E-value=3.7e-08 Score=77.86 Aligned_cols=68 Identities=22% Similarity=0.190 Sum_probs=55.8
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CCCCCeeEEeccccchhhHH
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------APIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~~~~~v~~i~gDi~~~~~~~ 109 (179)
..++.+|||+|||+|.++..++++.+ ...|+|+|+++. ....++.++++|+.+.+
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~--- 105 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYP-------------EATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYD--- 105 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCC---
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCC-------------CCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccC---
Confidence 45788999999999999999999874 579999999983 12338999999999865
Q ss_pred HHHhhcCCCCccEEeeCCC
Q 030299 110 VVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~ 128 (179)
+. ++||+|++...
T Consensus 106 -----~~-~~fD~v~~~~~ 118 (234)
T 3dtn_A 106 -----FE-EKYDMVVSALS 118 (234)
T ss_dssp -----CC-SCEEEEEEESC
T ss_pred -----CC-CCceEEEEeCc
Confidence 23 68999999764
No 54
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.75 E-value=7.4e-09 Score=82.66 Aligned_cols=73 Identities=15% Similarity=0.158 Sum_probs=55.5
Q ss_pred hCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---CCCCeeEEeccccchhhHHHHH
Q 030299 36 FNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---PIEGVIQVQGDITNARTAEVVI 112 (179)
Q Consensus 36 ~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---~~~~v~~i~gDi~~~~~~~~l~ 112 (179)
...++++.+|||||||+|.++..++++ + ..|+|+|+++.. ...++.++.+|+.+..
T Consensus 36 l~~~~~~~~vLDiGcG~G~~~~~l~~~-~--------------~~v~gvD~s~~~~~~a~~~~~~~~~d~~~~~------ 94 (240)
T 3dli_A 36 IPYFKGCRRVLDIGCGRGEFLELCKEE-G--------------IESIGVDINEDMIKFCEGKFNVVKSDAIEYL------ 94 (240)
T ss_dssp GGGTTTCSCEEEETCTTTHHHHHHHHH-T--------------CCEEEECSCHHHHHHHHTTSEEECSCHHHHH------
T ss_pred HhhhcCCCeEEEEeCCCCHHHHHHHhC-C--------------CcEEEEECCHHHHHHHHhhcceeeccHHHHh------
Confidence 344678899999999999999999887 3 579999999832 1123888899987742
Q ss_pred hhcCCCCccEEeeCCCC
Q 030299 113 RHFDGCKADLVVCDGAP 129 (179)
Q Consensus 113 ~~~~~~~~D~VlsD~~~ 129 (179)
..+++++||+|++....
T Consensus 95 ~~~~~~~fD~i~~~~~l 111 (240)
T 3dli_A 95 KSLPDKYLDGVMISHFV 111 (240)
T ss_dssp HTSCTTCBSEEEEESCG
T ss_pred hhcCCCCeeEEEECCch
Confidence 12466789999997543
No 55
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.74 E-value=2.1e-08 Score=78.92 Aligned_cols=70 Identities=11% Similarity=0.099 Sum_probs=56.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~ 108 (179)
+++.+|||||||+|.++..++++.+ ...|+|+|+++.. .++++.++++|+.+.+.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p-------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~- 105 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNP-------------DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTD- 105 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCT-------------TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGG-
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCC-------------CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHh-
Confidence 5688999999999999999999875 5799999999831 24689999999987431
Q ss_pred HHHHhhcCCCCccEEeeCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~ 128 (179)
.++++.||+|+++.+
T Consensus 106 -----~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 106 -----YFEDGEIDRLYLNFS 120 (214)
T ss_dssp -----TSCTTCCSEEEEESC
T ss_pred -----hcCCCCCCEEEEECC
Confidence 244568999999853
No 56
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.74 E-value=2.2e-08 Score=77.94 Aligned_cols=70 Identities=20% Similarity=0.089 Sum_probs=56.1
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~ 107 (179)
++++.+|||+|||+|.++..++++.+ ..+|+|+|+++.. ..++++++++|+.+...
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 104 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMP-------------NGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD 104 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCT-------------TSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCC-------------CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh
Confidence 37889999999999999999999854 5899999999831 24689999999976421
Q ss_pred HHHHHhhcCCCCccEEeeCCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
....||+|++++..
T Consensus 105 --------~~~~~D~i~~~~~~ 118 (204)
T 3e05_A 105 --------DLPDPDRVFIGGSG 118 (204)
T ss_dssp --------TSCCCSEEEESCCT
T ss_pred --------cCCCCCEEEECCCC
Confidence 12579999998754
No 57
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.74 E-value=2.9e-08 Score=76.85 Aligned_cols=65 Identities=14% Similarity=0.079 Sum_probs=53.8
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------CCCCCeeEEeccccchhhHHHHHhhc
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------APIEGVIQVQGDITNARTAEVVIRHF 115 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~------~~~~~v~~i~gDi~~~~~~~~l~~~~ 115 (179)
+.+|||+|||+|.++..++++ + ..|+|+|+++. +..+++.++++|+.+.+ +
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~--------~ 98 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-G--------------HQIEGLEPATRLVELARQTHPSVTFHHGTITDLS--------D 98 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-T--------------CCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGG--------G
T ss_pred CCeEEEecCCCCHHHHHHHhc-C--------------CeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccc--------c
Confidence 789999999999999999887 3 58999999983 12568999999998864 3
Q ss_pred CCCCccEEeeCCCC
Q 030299 116 DGCKADLVVCDGAP 129 (179)
Q Consensus 116 ~~~~~D~VlsD~~~ 129 (179)
++++||+|++....
T Consensus 99 ~~~~fD~v~~~~~l 112 (203)
T 3h2b_A 99 SPKRWAGLLAWYSL 112 (203)
T ss_dssp SCCCEEEEEEESSS
T ss_pred CCCCeEEEEehhhH
Confidence 56789999997643
No 58
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.73 E-value=8.4e-09 Score=81.14 Aligned_cols=68 Identities=15% Similarity=-0.010 Sum_probs=53.8
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-------C-C---------------CCCe
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-------A-P---------------IEGV 95 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-------~-~---------------~~~v 95 (179)
+.++.+|||+|||+|..+.+++++ + ..|+|+|+++. . . ..++
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~-g--------------~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v 84 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQ-G--------------YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGI 84 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHH-C--------------CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSS
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHC-C--------------CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCcc
Confidence 367889999999999999999987 3 68999999982 0 1 2579
Q ss_pred eEEeccccchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 96 IQVQGDITNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 96 ~~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
+++++|+++.+... .++||+|++.+.
T Consensus 85 ~~~~~d~~~l~~~~-------~~~fD~v~~~~~ 110 (203)
T 1pjz_A 85 EIWCGDFFALTARD-------IGHCAAFYDRAA 110 (203)
T ss_dssp EEEEECCSSSTHHH-------HHSEEEEEEESC
T ss_pred EEEECccccCCccc-------CCCEEEEEECcc
Confidence 99999999875310 147999998654
No 59
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.73 E-value=2.9e-08 Score=78.45 Aligned_cols=72 Identities=7% Similarity=0.001 Sum_probs=56.6
Q ss_pred CCCCCCEEEEEccC-CChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccch
Q 030299 38 IFEGVKRVVDLCAA-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNA 105 (179)
Q Consensus 38 ll~~g~~VlDLgag-pGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~ 105 (179)
.++++.+|||+||| +|.++..++++.+ ..|+|+|+++.. .. +++++++|+...
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~~--------------~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~ 116 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFFN--------------CKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGII 116 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHHC--------------CEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSS
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhcC--------------CEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhh
Confidence 45789999999999 9999999998853 689999999831 23 789999998654
Q ss_pred hhHHHHHhhcCCCCccEEeeCCCCCC
Q 030299 106 RTAEVVIRHFDGCKADLVVCDGAPDV 131 (179)
Q Consensus 106 ~~~~~l~~~~~~~~~D~VlsD~~~~~ 131 (179)
.. +++++||+|++|.+...
T Consensus 117 ~~-------~~~~~fD~I~~npp~~~ 135 (230)
T 3evz_A 117 KG-------VVEGTFDVIFSAPPYYD 135 (230)
T ss_dssp TT-------TCCSCEEEEEECCCCC-
T ss_pred hh-------cccCceeEEEECCCCcC
Confidence 32 34578999999966433
No 60
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.73 E-value=8.5e-09 Score=79.73 Aligned_cols=83 Identities=14% Similarity=-0.054 Sum_probs=54.7
Q ss_pred HHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CC--C--CeeEEecc
Q 030299 32 IDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PI--E--GVIQVQGD 101 (179)
Q Consensus 32 id~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~--~--~v~~i~gD 101 (179)
+.+......++.+|||+|||+|.++..++++.+ ...|+|+|+++.. .. . +++++++|
T Consensus 21 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d 87 (215)
T 4dzr_A 21 AIRFLKRMPSGTRVIDVGTGSGCIAVSIALACP-------------GVSVTAVDLSMDALAVARRNAERFGAVVDWAAAD 87 (215)
T ss_dssp HHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCT-------------TEEEEEEECC-------------------CCHHH
T ss_pred HHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCC-------------CCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcc
Confidence 334444347889999999999999999999864 4699999999841 11 1 57788888
Q ss_pred ccchhhHHHHHhhcCCCCccEEeeCCCCCC
Q 030299 102 ITNARTAEVVIRHFDGCKADLVVCDGAPDV 131 (179)
Q Consensus 102 i~~~~~~~~l~~~~~~~~~D~VlsD~~~~~ 131 (179)
+.+... ... ...++||+|++|.+...
T Consensus 88 ~~~~~~--~~~--~~~~~fD~i~~npp~~~ 113 (215)
T 4dzr_A 88 GIEWLI--ERA--ERGRPWHAIVSNPPYIP 113 (215)
T ss_dssp HHHHHH--HHH--HTTCCBSEEEECCCCCC
T ss_pred hHhhhh--hhh--hccCcccEEEECCCCCC
Confidence 887321 100 12368999999976543
No 61
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.73 E-value=8.6e-09 Score=78.93 Aligned_cols=65 Identities=23% Similarity=0.274 Sum_probs=52.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC--CCCCCeeEEeccccchhhHHHHHhhcCC
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM--APIEGVIQVQGDITNARTAEVVIRHFDG 117 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~--~~~~~v~~i~gDi~~~~~~~~l~~~~~~ 117 (179)
.++.+|||+|||+|.++..++++ . .|+|+|+++. +..++++++++|+.+. +++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~---------------~-~v~gvD~s~~~~~~~~~~~~~~~d~~~~---------~~~ 76 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR---------------N-TVVSTDLNIRALESHRGGNLVRADLLCS---------INQ 76 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT---------------S-EEEEEESCHHHHHTCSSSCEEECSTTTT---------BCG
T ss_pred CCCCeEEEeccCccHHHHHHHhc---------------C-cEEEEECCHHHHhcccCCeEEECChhhh---------ccc
Confidence 45679999999999999998764 3 8999999983 2256899999999884 234
Q ss_pred CCccEEeeCCCC
Q 030299 118 CKADLVVCDGAP 129 (179)
Q Consensus 118 ~~~D~VlsD~~~ 129 (179)
++||+|+++.+.
T Consensus 77 ~~fD~i~~n~~~ 88 (170)
T 3q87_B 77 ESVDVVVFNPPY 88 (170)
T ss_dssp GGCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 689999998654
No 62
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.73 E-value=2.1e-08 Score=80.57 Aligned_cols=69 Identities=14% Similarity=0.118 Sum_probs=56.5
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCC-eeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEG-VIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~-v~~i~gDi~~~~ 106 (179)
++++.+|||+|||+|.++..+++.+++ ..+|+++|+++.. ..++ ++++++|+.+.
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~------------~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 157 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGP------------EGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG- 157 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCT------------TSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCC------------CeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-
Confidence 378899999999999999999999653 5899999999831 2345 99999999864
Q ss_pred hHHHHHhhcCCCCccEEeeCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
+++.+||+|++|..
T Consensus 158 --------~~~~~~D~v~~~~~ 171 (255)
T 3mb5_A 158 --------IEEENVDHVILDLP 171 (255)
T ss_dssp --------CCCCSEEEEEECSS
T ss_pred --------cCCCCcCEEEECCC
Confidence 35568999999864
No 63
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.73 E-value=9.8e-09 Score=80.38 Aligned_cols=65 Identities=14% Similarity=0.159 Sum_probs=53.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CC-CCeeEEeccccchhhHHHHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PI-EGVIQVQGDITNARTAEVVI 112 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~-~~v~~i~gDi~~~~~~~~l~ 112 (179)
.++.+|||+|||+|.++..++++ + ..|+|+|+++.. .. .+++++++|+.+.+
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~------ 102 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLA-G--------------RTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFE------ 102 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHT-T--------------CEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCC------
T ss_pred cCCCeEEEeCCCCCHHHHHHHhC-C--------------CeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcC------
Confidence 47889999999999999999886 2 689999999831 12 48999999999864
Q ss_pred hhcCCCCccEEeeCCC
Q 030299 113 RHFDGCKADLVVCDGA 128 (179)
Q Consensus 113 ~~~~~~~~D~VlsD~~ 128 (179)
++ ++||+|++...
T Consensus 103 --~~-~~fD~v~~~~~ 115 (220)
T 3hnr_A 103 --VP-TSIDTIVSTYA 115 (220)
T ss_dssp --CC-SCCSEEEEESC
T ss_pred --CC-CCeEEEEECcc
Confidence 33 68999999764
No 64
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.72 E-value=2.2e-08 Score=82.58 Aligned_cols=75 Identities=17% Similarity=0.191 Sum_probs=56.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------------CCCCeeEEeccccchh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------PIEGVIQVQGDITNAR 106 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-------------~~~~v~~i~gDi~~~~ 106 (179)
.++.+|||||||+|.++..++++.+. ...|+|+|+++.. ..++++++++|+.+.+
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~ 102 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKP------------FEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFK 102 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSC------------CSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCC------------CCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCC
Confidence 58899999999999999999987632 5899999999831 1468999999999865
Q ss_pred hHHHHHhhcCCCCccEEeeCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
... ...+..++||+|++...
T Consensus 103 ~~~--~~~~~~~~fD~V~~~~~ 122 (299)
T 3g5t_A 103 FLG--ADSVDKQKIDMITAVEC 122 (299)
T ss_dssp GGC--TTTTTSSCEEEEEEESC
T ss_pred ccc--cccccCCCeeEEeHhhH
Confidence 210 00011268999999764
No 65
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.71 E-value=1.6e-08 Score=80.37 Aligned_cols=66 Identities=15% Similarity=0.098 Sum_probs=53.4
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------CCCCCeeEEeccccchhhHHHHH
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------APIEGVIQVQGDITNARTAEVVI 112 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~------~~~~~v~~i~gDi~~~~~~~~l~ 112 (179)
++++.+|||+|||+|.++..++++ + ..|+|+|+++. +..++++++++|+.+...
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~----- 105 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ-A--------------ARWAAYDFSPELLKLARANAPHADVYEWNGKGELP----- 105 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG-S--------------SEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCC-----
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc-C--------------CEEEEEECCHHHHHHHHHhCCCceEEEcchhhccC-----
Confidence 478899999999999999999887 3 68999999983 125689999999965321
Q ss_pred hhcC-CCCccEEeeC
Q 030299 113 RHFD-GCKADLVVCD 126 (179)
Q Consensus 113 ~~~~-~~~~D~VlsD 126 (179)
++ +++||+|++.
T Consensus 106 --~~~~~~fD~v~~~ 118 (226)
T 3m33_A 106 --AGLGAPFGLIVSR 118 (226)
T ss_dssp --TTCCCCEEEEEEE
T ss_pred --CcCCCCEEEEEeC
Confidence 33 5689999996
No 66
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.71 E-value=2.8e-08 Score=77.45 Aligned_cols=67 Identities=15% Similarity=0.212 Sum_probs=55.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------APIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~~~~~v~~i~gDi~~~~~~ 108 (179)
+++.+|||+|||+|.++..+++. . .+|+|+|+++. ...++++++++|+.+...
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~-~--------------~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~- 139 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL-V--------------QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ- 139 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-S--------------SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh-C--------------CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc-
Confidence 68899999999999999999987 3 69999999983 134689999999987532
Q ss_pred HHHHhhcCCCCccEEeeCCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~~ 129 (179)
.+.+||+|+++..+
T Consensus 140 -------~~~~~D~i~~~~~~ 153 (210)
T 3lbf_A 140 -------ARAPFDAIIVTAAP 153 (210)
T ss_dssp -------GGCCEEEEEESSBC
T ss_pred -------cCCCccEEEEccch
Confidence 24689999998754
No 67
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.71 E-value=1.4e-08 Score=81.00 Aligned_cols=68 Identities=22% Similarity=0.164 Sum_probs=54.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~~ 107 (179)
.++.+|||+|||+|.++..++++ ...|+|+|+++.. .+ ++++++++|+.+..
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~---------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 140 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALT---------------GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA- 140 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHT---------------TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-
T ss_pred cCCCEEEECccccCHHHHHHHHc---------------CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-
Confidence 37899999999999999999986 2689999999831 22 47999999998864
Q ss_pred HHHHHhhcCCCCccEEeeCCCCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGAPDV 131 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~~~~ 131 (179)
.+..||+|+++.+...
T Consensus 141 --------~~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 141 --------SFLKADVVFLSPPWGG 156 (241)
T ss_dssp --------GGCCCSEEEECCCCSS
T ss_pred --------ccCCCCEEEECCCcCC
Confidence 2358999999976543
No 68
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.70 E-value=3.7e-08 Score=81.20 Aligned_cols=72 Identities=25% Similarity=0.246 Sum_probs=58.3
Q ss_pred hCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccc
Q 030299 36 FNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITN 104 (179)
Q Consensus 36 ~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~ 104 (179)
...+.++.+|||+|||+|.++..++.+.+ .++|+|+|+++.. .+.++.++++|+.+
T Consensus 114 ~~~~~~~~~VLDlgcG~G~~s~~la~~~~-------------~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~ 180 (272)
T 3a27_A 114 AFISNENEVVVDMFAGIGYFTIPLAKYSK-------------PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRD 180 (272)
T ss_dssp HTSCCTTCEEEETTCTTTTTHHHHHHHTC-------------CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGG
T ss_pred HHhcCCCCEEEEecCcCCHHHHHHHHhCC-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHH
Confidence 34468899999999999999999999864 4699999999831 34688999999988
Q ss_pred hhhHHHHHhhcCCCCccEEeeCCCC
Q 030299 105 ARTAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 105 ~~~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
. . . ...||+|++|.+.
T Consensus 181 ~-~-------~-~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 181 V-E-------L-KDVADRVIMGYVH 196 (272)
T ss_dssp C-C-------C-TTCEEEEEECCCS
T ss_pred c-C-------c-cCCceEEEECCcc
Confidence 5 2 1 3579999999764
No 69
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.70 E-value=2.2e-08 Score=84.39 Aligned_cols=68 Identities=12% Similarity=0.151 Sum_probs=55.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCeeEEeccccchhhHHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---------~~~~v~~i~gDi~~~~~~~~ 110 (179)
.++++|||||||+|.+|..++++ + .+|+|+|+++.. ..++++++++|+.+.+
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~~-~--------------~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~---- 109 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAKN-A--------------KKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVD---- 109 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-S--------------SEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSC----
T ss_pred CCcCEEEEECCCchHHHHHHHhc-C--------------CEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCC----
Confidence 67899999999999999999987 2 689999999831 2468999999999864
Q ss_pred HHhhcCCCCccEEeeCCCCC
Q 030299 111 VIRHFDGCKADLVVCDGAPD 130 (179)
Q Consensus 111 l~~~~~~~~~D~VlsD~~~~ 130 (179)
+++..||.|+++.+.+
T Consensus 110 ----~~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 110 ----LNKLDFNKVVANLPYQ 125 (295)
T ss_dssp ----GGGSCCSEEEEECCGG
T ss_pred ----cccCCccEEEEeCccc
Confidence 2334699999987653
No 70
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.70 E-value=3.9e-08 Score=77.85 Aligned_cols=68 Identities=16% Similarity=0.214 Sum_probs=55.9
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------C--CCCCeeEEeccccchhhHHH
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------A--PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~------~--~~~~v~~i~gDi~~~~~~~~ 110 (179)
+.++.+|||||||+|.++..++++ + ..|+|+|+++. + ...++.++++|+.+.+
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~---- 111 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT-G--------------YKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLP---- 111 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCS----
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc-C--------------CeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCC----
Confidence 468899999999999999999886 3 68999999983 1 2468999999999864
Q ss_pred HHhhcCCCCccEEeeCCCC
Q 030299 111 VIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 111 l~~~~~~~~~D~VlsD~~~ 129 (179)
+++++||+|++....
T Consensus 112 ----~~~~~fD~v~~~~~l 126 (242)
T 3l8d_A 112 ----FENEQFEAIMAINSL 126 (242)
T ss_dssp ----SCTTCEEEEEEESCT
T ss_pred ----CCCCCccEEEEcChH
Confidence 356789999986543
No 71
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.69 E-value=2.9e-08 Score=85.44 Aligned_cols=77 Identities=19% Similarity=0.120 Sum_probs=58.4
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------C-----------C--CCeeEEe
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P-----------I--EGVIQVQ 99 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~-----------~--~~v~~i~ 99 (179)
+.++.+|||||||+|.++..++++.++ .+.|+|+|+++.. . . +++++++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~ 148 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGE------------HGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLK 148 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTT------------TCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEE
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCC------------CCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEE
Confidence 357899999999999999999998753 5799999999831 1 1 6899999
Q ss_pred ccccchhhHHHHHhhcCCCCccEEeeCCCC
Q 030299 100 GDITNARTAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 100 gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
+|+.+..... ...+++++||+|+++...
T Consensus 149 ~d~~~l~~~~--~~~~~~~~fD~V~~~~~l 176 (383)
T 4fsd_A 149 GFIENLATAE--PEGVPDSSVDIVISNCVC 176 (383)
T ss_dssp SCTTCGGGCB--SCCCCTTCEEEEEEESCG
T ss_pred ccHHHhhhcc--cCCCCCCCEEEEEEccch
Confidence 9999852100 001456789999998754
No 72
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.69 E-value=2.5e-08 Score=82.39 Aligned_cols=69 Identities=19% Similarity=0.140 Sum_probs=55.5
Q ss_pred CCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CeeEEeccccch
Q 030299 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNA 105 (179)
Q Consensus 38 ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~-~v~~i~gDi~~~ 105 (179)
.+++|.+|||+|||+|+++..+++..+ .+|+|+|+++.. .+. .++++++|+++.
T Consensus 122 ~~~~~~~VLDlgcG~G~~~~~la~~~~--------------~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~ 187 (278)
T 2frn_A 122 VAKPDELVVDMFAGIGHLSLPIAVYGK--------------AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF 187 (278)
T ss_dssp HCCTTCEEEETTCTTTTTHHHHHHHTC--------------CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC
T ss_pred hCCCCCEEEEecccCCHHHHHHHHhCC--------------CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHh
Confidence 357899999999999999999998743 379999999831 233 388999999986
Q ss_pred hhHHHHHhhcCCCCccEEeeCCCC
Q 030299 106 RTAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 106 ~~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
. .+..||+|++|..+
T Consensus 188 ~---------~~~~fD~Vi~~~p~ 202 (278)
T 2frn_A 188 P---------GENIADRILMGYVV 202 (278)
T ss_dssp C---------CCSCEEEEEECCCS
T ss_pred c---------ccCCccEEEECCch
Confidence 4 24689999998653
No 73
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.69 E-value=4.8e-08 Score=78.22 Aligned_cols=66 Identities=20% Similarity=0.114 Sum_probs=54.0
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC--------CCCCCeeEEeccccchhhHHHHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM--------APIEGVIQVQGDITNARTAEVVI 112 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~--------~~~~~v~~i~gDi~~~~~~~~l~ 112 (179)
++.+|||||||+|.++..++++.. ..|+|+|+++. ....++.++++|+.+.+
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~------ 103 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGA--------------KKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIA------ 103 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC--------------SEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCC------
T ss_pred CCCEEEEECCCCCHHHHHHHHcCC--------------CEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCC------
Confidence 788999999999999999988732 38999999983 12468999999998764
Q ss_pred hhcCCCCccEEeeCCC
Q 030299 113 RHFDGCKADLVVCDGA 128 (179)
Q Consensus 113 ~~~~~~~~D~VlsD~~ 128 (179)
+++++||+|++...
T Consensus 104 --~~~~~fD~v~~~~~ 117 (253)
T 3g5l_A 104 --IEPDAYNVVLSSLA 117 (253)
T ss_dssp --CCTTCEEEEEEESC
T ss_pred --CCCCCeEEEEEchh
Confidence 34578999999764
No 74
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.69 E-value=6.5e-08 Score=77.35 Aligned_cols=73 Identities=21% Similarity=0.262 Sum_probs=57.0
Q ss_pred HHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEe
Q 030299 32 IDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQ 99 (179)
Q Consensus 32 id~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~ 99 (179)
+.+... ++++.+|||||||+|.++..++++.+ ..|+|+|+++.. .+ .++++++
T Consensus 28 l~~~~~-~~~~~~VLDiGcG~G~~~~~la~~~~--------------~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~ 92 (256)
T 1nkv_A 28 LGRVLR-MKPGTRILDLGSGSGEMLCTWARDHG--------------ITGTGIDMSSLFTAQAKRRAEELGVSERVHFIH 92 (256)
T ss_dssp HHHHTC-CCTTCEEEEETCTTCHHHHHHHHHTC--------------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred HHHhcC-CCCCCEEEEECCCCCHHHHHHHHhcC--------------CeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE
Confidence 334444 47899999999999999999999864 689999999821 22 4799999
Q ss_pred ccccchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 100 GDITNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 100 gDi~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
+|+.+.+ + ++.||+|++...
T Consensus 93 ~d~~~~~--------~-~~~fD~V~~~~~ 112 (256)
T 1nkv_A 93 NDAAGYV--------A-NEKCDVAACVGA 112 (256)
T ss_dssp SCCTTCC--------C-SSCEEEEEEESC
T ss_pred CChHhCC--------c-CCCCCEEEECCC
Confidence 9998864 2 468999998543
No 75
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.69 E-value=1.7e-08 Score=82.26 Aligned_cols=101 Identities=15% Similarity=0.093 Sum_probs=57.6
Q ss_pred CCCCchHHHHHHhhCCcchhhh---cHHhHHHHh------CCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCC
Q 030299 6 RDKRDIYYRKAKEEGWRARSAF---KLLQIDEEF------NIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREG 76 (179)
Q Consensus 6 ~~~~d~y~~~a~~~~~~sRaa~---KL~eid~~~------~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~ 76 (179)
+...+.|-+.+ ...+..|... .+.++.+.. ..+.++.+|||||||+|.++..++.. +
T Consensus 21 ~~~~~~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~------------ 86 (298)
T 1ri5_A 21 EEIREHYNSIR-ERGRESRQRSKTINIRNANNFIKACLIRLYTKRGDSVLDLGCGKGGDLLKYERA-G------------ 86 (298)
T ss_dssp ---------------------CCSHHHHHHHHHHHHHHHHHHCCTTCEEEEETCTTTTTHHHHHHH-T------------
T ss_pred HHHHHHHHHhh-cccccccccchhhhHHHHHHHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHC-C------------
Confidence 44556664443 4455555542 333332221 12478899999999999999998776 3
Q ss_pred CCCeEEEEeCCCCC-----------CC-CCeeEEeccccchhhHHHHHhhc-CCCCccEEeeCCCC
Q 030299 77 DLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNARTAEVVIRHF-DGCKADLVVCDGAP 129 (179)
Q Consensus 77 ~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~~~~~l~~~~-~~~~~D~VlsD~~~ 129 (179)
...|+|+|+++.. .. .++.++++|+.+.+ + .++.||+|++....
T Consensus 87 -~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~~fD~v~~~~~l 143 (298)
T 1ri5_A 87 -IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRH--------MDLGKEFDVISSQFSF 143 (298)
T ss_dssp -CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSC--------CCCSSCEEEEEEESCG
T ss_pred -CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccc--------cCCCCCcCEEEECchh
Confidence 3699999999831 11 36899999998864 2 35689999998653
No 76
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.68 E-value=3.7e-08 Score=81.94 Aligned_cols=68 Identities=13% Similarity=0.111 Sum_probs=55.6
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~ 106 (179)
+.++.+|||+|||+|.++..++++.+ ..|+|+|+++.. .+ .+++++.+|+.+.+
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 180 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFG--------------SRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP 180 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC--------------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcC--------------CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC
Confidence 46789999999999999999999864 689999999831 12 37999999998864
Q ss_pred hHHHHHhhcCCCCccEEeeCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
++++.||+|++...
T Consensus 181 --------~~~~~fD~V~~~~~ 194 (312)
T 3vc1_A 181 --------FDKGAVTASWNNES 194 (312)
T ss_dssp --------CCTTCEEEEEEESC
T ss_pred --------CCCCCEeEEEECCc
Confidence 45678999998654
No 77
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.68 E-value=1.6e-08 Score=81.17 Aligned_cols=70 Identities=13% Similarity=0.037 Sum_probs=54.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~ 108 (179)
+++.+|||||||+|.++..++...+ ..+|+|+|+++.. .+++++++++|+.+....
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 135 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFP-------------HLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQR 135 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCT-------------TCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCC-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhccc
Confidence 5788999999999999999998644 5799999999821 346799999999775310
Q ss_pred HHHHhhcCCCCccEEeeCC
Q 030299 109 EVVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~ 127 (179)
. ....+||+|+++.
T Consensus 136 ----~-~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 136 ----K-DVRESYDIVTARA 149 (240)
T ss_dssp ----T-TTTTCEEEEEEEC
T ss_pred ----c-cccCCccEEEEec
Confidence 0 0135899999976
No 78
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.68 E-value=2.5e-08 Score=78.76 Aligned_cols=71 Identities=15% Similarity=0.137 Sum_probs=56.6
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------C-------CCCeeEEeccc
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P-------IEGVIQVQGDI 102 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---------~-------~~~v~~i~gDi 102 (179)
++++.+|||+|||+|.++..+++..++ .++|+|+|+++.. . ..++.++++|+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 142 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGC------------TGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG 142 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCT------------TCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCC------------CcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCc
Confidence 578899999999999999999998753 4799999999831 1 34799999999
Q ss_pred cchhhHHHHHhhcCCCCccEEeeCCCC
Q 030299 103 TNARTAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 103 ~~~~~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
.+... ...+||+|+++..+
T Consensus 143 ~~~~~--------~~~~fD~i~~~~~~ 161 (226)
T 1i1n_A 143 RMGYA--------EEAPYDAIHVGAAA 161 (226)
T ss_dssp GGCCG--------GGCCEEEEEECSBB
T ss_pred ccCcc--------cCCCcCEEEECCch
Confidence 86431 23579999998764
No 79
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.68 E-value=4.1e-08 Score=74.54 Aligned_cols=69 Identities=19% Similarity=0.178 Sum_probs=53.0
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~ 106 (179)
+.++.+|||+|||+|.++..++++ + ...|+|+|+++.. .+ .+++++++|+.+..
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~-~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 94 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR-G-------------MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAI 94 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT-T-------------CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHH
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc-C-------------CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhH
Confidence 357889999999999999999886 3 4699999999831 12 36889999998742
Q ss_pred hHHHHHhhcCCCCccEEeeCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
. .. ...||+|++|..
T Consensus 95 ~------~~-~~~fD~i~~~~~ 109 (177)
T 2esr_A 95 D------CL-TGRFDLVFLDPP 109 (177)
T ss_dssp H------HB-CSCEEEEEECCS
T ss_pred H------hh-cCCCCEEEECCC
Confidence 1 12 346999999864
No 80
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.68 E-value=5.1e-08 Score=76.84 Aligned_cols=66 Identities=18% Similarity=0.077 Sum_probs=53.2
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~-~v~~i~gDi~~~~ 106 (179)
+.++.+|||||||+|.++..++++ + .+|+|+|+++.. ..+ +++++++|+.+..
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~ 117 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA-G--------------GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL 117 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc-C--------------CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc
Confidence 367899999999999999999987 3 689999999831 245 8999999998732
Q ss_pred hHHHHHhhcCCCCccEEeeCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~ 127 (179)
. ....||+|++++
T Consensus 118 ~--------~~~~~D~v~~~~ 130 (204)
T 3njr_A 118 A--------DLPLPEAVFIGG 130 (204)
T ss_dssp T--------TSCCCSEEEECS
T ss_pred c--------cCCCCCEEEECC
Confidence 1 124799999886
No 81
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.68 E-value=5.6e-08 Score=79.61 Aligned_cols=68 Identities=13% Similarity=0.023 Sum_probs=53.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC--------CC--------------------
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM--------AP-------------------- 91 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~--------~~-------------------- 91 (179)
.++.+|||+|||+|..+.+++++ + ..|+|+|+++. ..
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~-G--------------~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR-G--------------HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSS 131 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT-T--------------CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEET
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC-C--------------CeEEEEECCHHHHHHHHHhcccccccccccccccccccccC
Confidence 57889999999999999999986 3 68999999982 11
Q ss_pred CCCeeEEeccccchhhHHHHHhhcCCCCccEEeeCCCC
Q 030299 92 IEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 92 ~~~v~~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
..+++++++|+++.+.. ..++||+|++.++.
T Consensus 132 ~~~i~~~~~D~~~l~~~-------~~~~FD~V~~~~~l 162 (252)
T 2gb4_A 132 SGSISLYCCSIFDLPRA-------NIGKFDRIWDRGAL 162 (252)
T ss_dssp TSSEEEEESCTTTGGGG-------CCCCEEEEEESSST
T ss_pred CCceEEEECccccCCcc-------cCCCEEEEEEhhhh
Confidence 15789999999987521 12689999987654
No 82
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.67 E-value=5.4e-08 Score=78.65 Aligned_cols=68 Identities=16% Similarity=0.125 Sum_probs=55.2
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~ 106 (179)
+.++.+|||||||+|.++..++++.+ ..|+|+|+++.. .+ .++.++.+|+.+.+
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 124 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATARD--------------VRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP 124 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHSC--------------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcC--------------CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC
Confidence 36889999999999999999998753 799999999831 12 36999999998864
Q ss_pred hHHHHHhhcCCCCccEEeeCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
+++++||+|++...
T Consensus 125 --------~~~~~fD~v~~~~~ 138 (273)
T 3bus_A 125 --------FEDASFDAVWALES 138 (273)
T ss_dssp --------SCTTCEEEEEEESC
T ss_pred --------CCCCCccEEEEech
Confidence 45578999998654
No 83
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.67 E-value=6e-08 Score=75.10 Aligned_cols=66 Identities=27% Similarity=0.384 Sum_probs=53.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------C-CCCeeEEeccccchhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P-IEGVIQVQGDITNART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~-~~~v~~i~gDi~~~~~ 107 (179)
+++ +|||+|||+|.++..++++ + ...|+|+|+++.. . .+++.++++|+.+.+
T Consensus 43 ~~~-~vLdiG~G~G~~~~~l~~~-~-------------~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 106 (219)
T 3dlc_A 43 TAG-TCIDIGSGPGALSIALAKQ-S-------------DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP- 106 (219)
T ss_dssp CEE-EEEEETCTTSHHHHHHHHH-S-------------EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS-
T ss_pred CCC-EEEEECCCCCHHHHHHHHc-C-------------CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC-
Confidence 455 9999999999999999998 3 4799999999831 1 247999999998864
Q ss_pred HHHHHhhcCCCCccEEeeCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~ 128 (179)
++++.||+|++...
T Consensus 107 -------~~~~~~D~v~~~~~ 120 (219)
T 3dlc_A 107 -------IEDNYADLIVSRGS 120 (219)
T ss_dssp -------SCTTCEEEEEEESC
T ss_pred -------CCcccccEEEECch
Confidence 45678999999764
No 84
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.67 E-value=9.4e-08 Score=76.41 Aligned_cols=68 Identities=15% Similarity=0.012 Sum_probs=55.0
Q ss_pred CCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC----------CCCCCeeEEeccccchhh
Q 030299 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----------APIEGVIQVQGDITNART 107 (179)
Q Consensus 38 ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~----------~~~~~v~~i~gDi~~~~~ 107 (179)
.+.++.+|||||||+|.++..++++ ...|+|+|+++. ...+++.++++|+.+.+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~---------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~- 99 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR---------------GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP- 99 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT---------------TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC-
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC---------------CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC-
Confidence 3578899999999999999999875 268999999983 12468999999998754
Q ss_pred HHHHHhhcCCCCccEEeeCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~ 128 (179)
++++.||+|++...
T Consensus 100 -------~~~~~fD~v~~~~~ 113 (263)
T 2yqz_A 100 -------LPDESVHGVIVVHL 113 (263)
T ss_dssp -------SCTTCEEEEEEESC
T ss_pred -------CCCCCeeEEEECCc
Confidence 35568999999654
No 85
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.67 E-value=6.9e-08 Score=84.93 Aligned_cols=75 Identities=20% Similarity=0.242 Sum_probs=58.2
Q ss_pred CCCCEEEEEccC------CChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--CCCCeeEEeccccchhhHHHH
Q 030299 40 EGVKRVVDLCAA------PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--PIEGVIQVQGDITNARTAEVV 111 (179)
Q Consensus 40 ~~g~~VlDLgag------pGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~--~~~~v~~i~gDi~~~~~~~~l 111 (179)
.++.+||||||| +|+++..++.+..+ .++|+|+|+++.. ..++++++++|+.+.+...++
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP------------~a~V~GVDiSp~m~~~~~rI~fv~GDa~dlpf~~~l 282 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFP------------RGQIYGLDIMDKSHVDELRIRTIQGDQNDAEFLDRI 282 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCT------------TCEEEEEESSCCGGGCBTTEEEEECCTTCHHHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCC------------CCEEEEEECCHHHhhcCCCcEEEEecccccchhhhh
Confidence 467899999999 78888877776532 5899999999953 246899999999998765444
Q ss_pred HhhcCCCCccEEeeCCC
Q 030299 112 IRHFDGCKADLVVCDGA 128 (179)
Q Consensus 112 ~~~~~~~~~D~VlsD~~ 128 (179)
... .++||+|++|+.
T Consensus 283 ~~~--d~sFDlVisdgs 297 (419)
T 3sso_A 283 ARR--YGPFDIVIDDGS 297 (419)
T ss_dssp HHH--HCCEEEEEECSC
T ss_pred hcc--cCCccEEEECCc
Confidence 432 358999999874
No 86
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.67 E-value=1.4e-07 Score=77.00 Aligned_cols=80 Identities=13% Similarity=0.084 Sum_probs=57.6
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CC-----CC-CeeEEecccc
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------AP-----IE-GVIQVQGDIT 103 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~~-----~~-~v~~i~gDi~ 103 (179)
..++.+|||||||+|.++..++++.+ ...|+|+|+++. .. .. +++++++|+.
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~-------------~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~ 100 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLE-------------KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVT 100 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCT-------------TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCC-------------CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHH
Confidence 45788999999999999999999875 479999999983 11 12 4889999998
Q ss_pred chhhHHHHHhhcCCCCccEEeeCCCCCCC
Q 030299 104 NARTAEVVIRHFDGCKADLVVCDGAPDVT 132 (179)
Q Consensus 104 ~~~~~~~l~~~~~~~~~D~VlsD~~~~~~ 132 (179)
+... ......++..+||+|++|.+....
T Consensus 101 ~~~~-~~~~~~~~~~~fD~Vv~nPPy~~~ 128 (260)
T 2ozv_A 101 LRAK-ARVEAGLPDEHFHHVIMNPPYNDA 128 (260)
T ss_dssp CCHH-HHHHTTCCTTCEEEEEECCCC---
T ss_pred HHhh-hhhhhccCCCCcCEEEECCCCcCC
Confidence 8631 111112455789999999654433
No 87
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.66 E-value=2.3e-08 Score=78.47 Aligned_cols=68 Identities=13% Similarity=0.046 Sum_probs=52.9
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCC--CCeeEEeccccchhh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------API--EGVIQVQGDITNART 107 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~~~--~~v~~i~gDi~~~~~ 107 (179)
++.+|||+|||+|.++..++.+. ...|+|+|+++. ... ++++++++|+.+...
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~--------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~ 118 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ--------------AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLK 118 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--------------CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTT
T ss_pred CCCeEEEcCCccCHHHHHHHHcc--------------CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHH
Confidence 67899999999999999877763 368999999983 123 589999999987421
Q ss_pred HHHHHhhcCCCC-ccEEeeCCC
Q 030299 108 AEVVIRHFDGCK-ADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~~~-~D~VlsD~~ 128 (179)
.+.+++ ||+|++|.+
T Consensus 119 ------~~~~~~~fD~I~~~~~ 134 (201)
T 2ift_A 119 ------QPQNQPHFDVVFLDPP 134 (201)
T ss_dssp ------SCCSSCCEEEEEECCC
T ss_pred ------hhccCCCCCEEEECCC
Confidence 122467 999999876
No 88
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.66 E-value=3.6e-08 Score=76.28 Aligned_cols=68 Identities=18% Similarity=0.235 Sum_probs=54.8
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CCCCCeeEEeccccchhhHH
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------APIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~~~~~v~~i~gDi~~~~~~~ 109 (179)
++++.+|||+|||+|.++..++++.. ..|+|+|+++. ...+++.++++|+.+.+
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~--------------~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~--- 102 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGF--------------PNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLD--- 102 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTC--------------CCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCC---
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCC--------------CcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCC---
Confidence 57889999999999999999988632 38999999983 12358999999998853
Q ss_pred HHHhhcCCCCccEEeeCCC
Q 030299 110 VVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~ 128 (179)
++++.||+|++++.
T Consensus 103 -----~~~~~fD~v~~~~~ 116 (215)
T 2pxx_A 103 -----FPSASFDVVLEKGT 116 (215)
T ss_dssp -----SCSSCEEEEEEESH
T ss_pred -----CCCCcccEEEECcc
Confidence 34568999998764
No 89
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.66 E-value=1.1e-07 Score=81.13 Aligned_cols=67 Identities=13% Similarity=0.235 Sum_probs=54.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCC-CeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIE-GVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~-~v~~i~gDi~~~~~~ 108 (179)
.++.+|||||||+|.++..++++ + ..+|+|+|++++. ... .++++++|+.+.+
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g-------------~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 128 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-G-------------ARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVE-- 128 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-T-------------CSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC--
T ss_pred CCCCEEEEEeccchHHHHHHHHC-C-------------CCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHcc--
Confidence 57889999999999999999987 4 3699999999841 123 3899999999864
Q ss_pred HHHHhhcCCCCccEEeeCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~ 128 (179)
+++++||+|+++..
T Consensus 129 ------~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 129 ------LPVEKVDIIISEWM 142 (349)
T ss_dssp ------CSSSCEEEEEECCC
T ss_pred ------CCCCceEEEEEccc
Confidence 45578999999864
No 90
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.66 E-value=6.9e-08 Score=80.98 Aligned_cols=79 Identities=23% Similarity=0.203 Sum_probs=60.1
Q ss_pred hHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEe
Q 030299 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQ 99 (179)
Q Consensus 31 eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~ 99 (179)
.+.+... ++++.+|||+|||+|.++..+++..+. .++|+|+|+++.. .+++++++.
T Consensus 66 ~l~~~l~-~~~~~~VLDiGcG~G~~~~~la~~~~~------------~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~ 132 (317)
T 1dl5_A 66 LFMEWVG-LDKGMRVLEIGGGTGYNAAVMSRVVGE------------KGLVVSVEYSRKICEIAKRNVERLGIENVIFVC 132 (317)
T ss_dssp HHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCT------------TCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred HHHHhcC-CCCcCEEEEecCCchHHHHHHHHhcCC------------CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEE
Confidence 3334443 478999999999999999999998652 3789999999831 346799999
Q ss_pred ccccchhhHHHHHhhcCCCCccEEeeCCCCC
Q 030299 100 GDITNARTAEVVIRHFDGCKADLVVCDGAPD 130 (179)
Q Consensus 100 gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~~ 130 (179)
+|+.+... ..++||+|+++....
T Consensus 133 ~d~~~~~~--------~~~~fD~Iv~~~~~~ 155 (317)
T 1dl5_A 133 GDGYYGVP--------EFSPYDVIFVTVGVD 155 (317)
T ss_dssp SCGGGCCG--------GGCCEEEEEECSBBS
T ss_pred CChhhccc--------cCCCeEEEEEcCCHH
Confidence 99987431 235799999997653
No 91
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.66 E-value=4e-08 Score=77.45 Aligned_cols=65 Identities=14% Similarity=0.212 Sum_probs=51.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCC-CeeEEeccccchhhHHHHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIE-GVIQVQGDITNARTAEVVI 112 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~~-~v~~i~gDi~~~~~~~~l~ 112 (179)
.++.+|||||||+|.++..++++. ..|+|+|+++.. ..+ ++.++++|+.+..
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~------ 99 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHF---------------NDITCVEASEEAISHAQGRLKDGITYIHSRFEDAQ------ 99 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTC---------------SCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCC------
T ss_pred cCCCcEEEECCCCCHHHHHHHHhC---------------CcEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcC------
Confidence 467799999999999999998752 479999999831 122 8999999998752
Q ss_pred hhcCCCCccEEeeCCC
Q 030299 113 RHFDGCKADLVVCDGA 128 (179)
Q Consensus 113 ~~~~~~~~D~VlsD~~ 128 (179)
++++||+|++...
T Consensus 100 ---~~~~fD~v~~~~~ 112 (250)
T 2p7i_A 100 ---LPRRYDNIVLTHV 112 (250)
T ss_dssp ---CSSCEEEEEEESC
T ss_pred ---cCCcccEEEEhhH
Confidence 3568999998764
No 92
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.66 E-value=7.9e-08 Score=73.62 Aligned_cols=66 Identities=18% Similarity=0.155 Sum_probs=53.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~ 108 (179)
.++.+|||+|||+|.++..++++ + ..|+|+|+++.. ..+++.++++|+.+.+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-- 93 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAAN-G--------------YDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLT-- 93 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCC--
T ss_pred cCCCeEEEEcCCCCHHHHHHHHC-C--------------CeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCC--
Confidence 46679999999999999999886 3 689999999831 2457999999998854
Q ss_pred HHHHhhcCCCCccEEeeCCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~~ 129 (179)
+ +.+||+|++....
T Consensus 94 ------~-~~~~D~v~~~~~l 107 (199)
T 2xvm_A 94 ------F-DRQYDFILSTVVL 107 (199)
T ss_dssp ------C-CCCEEEEEEESCG
T ss_pred ------C-CCCceEEEEcchh
Confidence 3 4689999987643
No 93
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.65 E-value=3.7e-08 Score=74.19 Aligned_cols=65 Identities=18% Similarity=0.255 Sum_probs=53.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~ 108 (179)
.++.+|||+|||+|.++..+++ + ...|+|+|+++.. ..++++++++|+.+.
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~--~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~--- 95 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK--R-------------CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDV--- 95 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT--T-------------SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHH---
T ss_pred CCCCEEEEeCCCCCHHHHHHHh--c-------------CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCcccc---
Confidence 6788999999999999999987 3 4799999999831 236799999999872
Q ss_pred HHHHhhcCCCCccEEeeCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~ 128 (179)
+++..||+|+++..
T Consensus 96 ------~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 96 ------LDKLEFNKAFIGGT 109 (183)
T ss_dssp ------GGGCCCSEEEECSC
T ss_pred ------ccCCCCcEEEECCc
Confidence 23358999999876
No 94
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.65 E-value=1.1e-07 Score=73.81 Aligned_cols=67 Identities=18% Similarity=0.122 Sum_probs=53.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~ 108 (179)
.++.+|||+|||+|.++..++++ + ...|+|+|+++.. .. +++++++|+.+.+
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~-~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~-- 110 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLL-G-------------AKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEFN-- 110 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHT-T-------------CSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGCC--
T ss_pred CCcCEEEEeeCCCCHHHHHHHHc-C-------------CCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHcC--
Confidence 46889999999999999999886 3 2589999999831 12 7899999998742
Q ss_pred HHHHhhcCCCCccEEeeCCCCCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGAPDVT 132 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~~~~~ 132 (179)
..||+|++|.+....
T Consensus 111 ---------~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 111 ---------SRVDIVIMNPPFGSQ 125 (207)
T ss_dssp ---------CCCSEEEECCCCSSS
T ss_pred ---------CCCCEEEEcCCCccc
Confidence 379999999875443
No 95
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.65 E-value=4.4e-08 Score=77.51 Aligned_cols=75 Identities=17% Similarity=0.185 Sum_probs=54.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~~ 107 (179)
.++.+|||||||+|.++.++++.++. .++|+++|+++.. .. .+++++++|+.+...
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~ 124 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQP------------GARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIP 124 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCT------------TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGG
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCC------------CCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHH
Confidence 46789999999999999999987653 5899999999831 22 359999999876321
Q ss_pred HHHHHhhcCCCCccEEeeCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~ 128 (179)
.+...+..++||+|++|+.
T Consensus 125 --~~~~~~~~~~fD~V~~d~~ 143 (221)
T 3u81_A 125 --QLKKKYDVDTLDMVFLDHW 143 (221)
T ss_dssp --GTTTTSCCCCCSEEEECSC
T ss_pred --HHHHhcCCCceEEEEEcCC
Confidence 0111112258999999974
No 96
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.65 E-value=3.5e-08 Score=77.12 Aligned_cols=66 Identities=18% Similarity=0.222 Sum_probs=53.5
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CCCCCeeEEeccccchhhHH
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------APIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~~~~~v~~i~gDi~~~~~~~ 109 (179)
..++.+|||+|||+|.++..++++. ..|+|+|+++. ...++++++++|+.+..
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~--- 110 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC---------------KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS--- 110 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE---------------EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC---
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC---------------CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC---
Confidence 3567899999999999999998763 58999999983 12357999999998864
Q ss_pred HHHhhcCCCCccEEeeCCC
Q 030299 110 VVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~ 128 (179)
++++||+|++...
T Consensus 111 ------~~~~fD~v~~~~~ 123 (216)
T 3ofk_A 111 ------TAELFDLIVVAEV 123 (216)
T ss_dssp ------CSCCEEEEEEESC
T ss_pred ------CCCCccEEEEccH
Confidence 3468999999753
No 97
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.65 E-value=5.7e-08 Score=79.66 Aligned_cols=69 Identities=14% Similarity=0.137 Sum_probs=55.6
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------------CCCCeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------PIEGVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------------~~~~v~~i~gDi~~~~ 106 (179)
++++.+|||+|||+|.++..+++.+.+ ...|+|+|+++.. ..++++++++|+.+.
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~------------~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~- 174 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNG------------KGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF- 174 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTT------------SSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC-
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCC------------CCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc-
Confidence 367899999999999999999998542 5799999999831 235799999999873
Q ss_pred hHHHHHhhcCCCCccEEeeCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
+++.+||+|++|..
T Consensus 175 --------~~~~~fD~Vi~~~~ 188 (275)
T 1yb2_A 175 --------ISDQMYDAVIADIP 188 (275)
T ss_dssp --------CCSCCEEEEEECCS
T ss_pred --------CcCCCccEEEEcCc
Confidence 34568999999753
No 98
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.65 E-value=3.6e-08 Score=80.95 Aligned_cols=69 Identities=20% Similarity=0.143 Sum_probs=55.9
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhH
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~ 108 (179)
+.++.+|||||||+|.|+..++++.+. ...|+|+|+++.. ...+++++++|+.+.+
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~------------~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~-- 85 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPE------------GSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE-- 85 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCT------------TCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCC--
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCC------------CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcC--
Confidence 467889999999999999999988752 4799999999831 1238999999999854
Q ss_pred HHHHhhcCCCCccEEeeCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~ 128 (179)
+ +.+||+|++...
T Consensus 86 ------~-~~~fD~v~~~~~ 98 (284)
T 3gu3_A 86 ------L-NDKYDIAICHAF 98 (284)
T ss_dssp ------C-SSCEEEEEEESC
T ss_pred ------c-CCCeeEEEECCh
Confidence 2 358999999874
No 99
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.65 E-value=9.1e-08 Score=78.09 Aligned_cols=66 Identities=15% Similarity=0.065 Sum_probs=53.3
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------C-CCCeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P-IEGVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~-~~~v~~i~gDi~~~~ 106 (179)
+.++.+|||||||+|.++..++++.+ ..|+|+|+++.. . .+++.++++|+.+.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~--------------~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~- 126 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYD--------------VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF- 126 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--------------CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC-
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcC--------------CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC-
Confidence 36789999999999999999997764 599999999831 1 24789999998653
Q ss_pred hHHHHHhhcCCCCccEEeeCCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
+ ++||+|++....
T Consensus 127 ---------~-~~fD~v~~~~~l 139 (287)
T 1kpg_A 127 ---------D-EPVDRIVSIGAF 139 (287)
T ss_dssp ---------C-CCCSEEEEESCG
T ss_pred ---------C-CCeeEEEEeCch
Confidence 3 589999987653
No 100
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.65 E-value=4.6e-08 Score=75.93 Aligned_cols=65 Identities=18% Similarity=0.108 Sum_probs=53.2
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~~ 109 (179)
++.+|||+|||+|.++..++...+ ...|+|+|+++.. ..++++++++|+.+..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--- 128 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP-------------EAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP--- 128 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT-------------TSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC---
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC---
Confidence 578999999999999999998865 5799999999831 2456999999998753
Q ss_pred HHHhhcCCCCccEEeeCC
Q 030299 110 VVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~ 127 (179)
+..+||+|+++.
T Consensus 129 ------~~~~~D~i~~~~ 140 (207)
T 1jsx_A 129 ------SEPPFDGVISRA 140 (207)
T ss_dssp ------CCSCEEEEECSC
T ss_pred ------ccCCcCEEEEec
Confidence 235899999864
No 101
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.64 E-value=1.6e-08 Score=80.73 Aligned_cols=68 Identities=12% Similarity=0.038 Sum_probs=52.8
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhH
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~ 108 (179)
.+++.+|||||||+|.++..+++.. ...|+|+|+++.. ...++.++++|+.+..
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~--------------~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~-- 121 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAP--------------IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVA-- 121 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSC--------------EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHG--
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcC--------------CCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhh--
Confidence 3678899999999999999996542 2489999999831 1257899999998752
Q ss_pred HHHHhhcCCCCccEEeeC
Q 030299 109 EVVIRHFDGCKADLVVCD 126 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD 126 (179)
..++++.||+|++|
T Consensus 122 ----~~~~~~~fD~V~~d 135 (236)
T 1zx0_A 122 ----PTLPDGHFDGILYD 135 (236)
T ss_dssp ----GGSCTTCEEEEEEC
T ss_pred ----cccCCCceEEEEEC
Confidence 12556789999996
No 102
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.64 E-value=3.4e-08 Score=77.58 Aligned_cols=67 Identities=12% Similarity=0.093 Sum_probs=52.6
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~~ 109 (179)
++.+|||||||+|.++..++.+. ...|+|+|+++.. ..++++++++|+.+...
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~--------------~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~-- 117 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY--------------AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLA-- 117 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--------------CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHS--
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC--------------CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHh--
Confidence 67899999999999999887763 2589999999831 23589999999887421
Q ss_pred HHHhhcCCCCccEEeeCCC
Q 030299 110 VVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~ 128 (179)
.....||+|++|.+
T Consensus 118 -----~~~~~fD~V~~~~p 131 (202)
T 2fpo_A 118 -----QKGTPHNIVFVDPP 131 (202)
T ss_dssp -----SCCCCEEEEEECCS
T ss_pred -----hcCCCCCEEEECCC
Confidence 13458999999876
No 103
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.64 E-value=5.1e-08 Score=76.53 Aligned_cols=55 Identities=15% Similarity=0.141 Sum_probs=46.5
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------------CCCCCeeEEecccc
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------------APIEGVIQVQGDIT 103 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------------~~~~~v~~i~gDi~ 103 (179)
++++.+|||||||+|.++..++++.+ ..+|+|+|+++. ...++++++++|+.
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p-------------~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~ 91 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNP-------------SRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAE 91 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCT-------------TEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCST
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCC-------------CCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchh
Confidence 36888999999999999999999864 579999999983 12458999999998
Q ss_pred chh
Q 030299 104 NAR 106 (179)
Q Consensus 104 ~~~ 106 (179)
+.+
T Consensus 92 ~l~ 94 (218)
T 3mq2_A 92 RLP 94 (218)
T ss_dssp TCC
T ss_pred hCC
Confidence 864
No 104
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.64 E-value=1.3e-07 Score=74.63 Aligned_cols=67 Identities=21% Similarity=0.255 Sum_probs=53.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC--------CCCCCeeEEeccccchhhHHHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM--------APIEGVIQVQGDITNARTAEVV 111 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~--------~~~~~v~~i~gDi~~~~~~~~l 111 (179)
.++.+|||||||+|.++..++++ + ...|+|+|+++. ....++.++++|+.+.+
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~-~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~----- 102 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEH-G-------------ASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLH----- 102 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T-------------CSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCC-----
T ss_pred cCCCEEEEEcCcCCHHHHHHHHC-C-------------CCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhcc-----
Confidence 47889999999999999999886 3 248999999973 12247899999998754
Q ss_pred HhhcCCCCccEEeeCCC
Q 030299 112 IRHFDGCKADLVVCDGA 128 (179)
Q Consensus 112 ~~~~~~~~~D~VlsD~~ 128 (179)
+++.+||+|++...
T Consensus 103 ---~~~~~fD~v~~~~~ 116 (243)
T 3bkw_A 103 ---LPQDSFDLAYSSLA 116 (243)
T ss_dssp ---CCTTCEEEEEEESC
T ss_pred ---CCCCCceEEEEecc
Confidence 34568999998654
No 105
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.63 E-value=5.5e-08 Score=77.80 Aligned_cols=71 Identities=6% Similarity=-0.020 Sum_probs=56.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------APIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~~~~~v~~i~gDi~~~~~~ 108 (179)
+++.+|||||||+|.++..++++.+ ...|+|+|+++. ..+.|+.++++|+.+..
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p-------------~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l-- 97 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRP-------------EQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVL-- 97 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCT-------------TSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHH--
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCC-------------CCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHH--
Confidence 4678999999999999999999865 578999999983 13578999999998741
Q ss_pred HHHHhhcCCCCccEEeeCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~ 128 (179)
...++++.+|.|++..+
T Consensus 98 ---~~~~~~~~~d~v~~~~~ 114 (218)
T 3dxy_A 98 ---HKMIPDNSLRMVQLFFP 114 (218)
T ss_dssp ---HHHSCTTCEEEEEEESC
T ss_pred ---HHHcCCCChheEEEeCC
Confidence 11256678999998743
No 106
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.63 E-value=5.2e-08 Score=75.84 Aligned_cols=72 Identities=18% Similarity=0.063 Sum_probs=53.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----CCCCCeeEEeccccchhhHHHHHhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----APIEGVIQVQGDITNARTAEVVIRH 114 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----~~~~~v~~i~gDi~~~~~~~~l~~~ 114 (179)
.++.+|||+|||+|.++..++++ + ..|+|+|+++. ....++.++.+|+.+.... ..
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~----~~ 111 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADR-G--------------IEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEA----KV 111 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTT-T--------------CEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTT----CS
T ss_pred CCCCEEEEeCCCCCHHHHHHHHC-C--------------CEEEEEcCCHHHHHHHHHhcccccchhhHHhhccc----cc
Confidence 45689999999999999999876 3 68999999983 1235677888888775210 01
Q ss_pred cCCCCccEEeeCCCCC
Q 030299 115 FDGCKADLVVCDGAPD 130 (179)
Q Consensus 115 ~~~~~~D~VlsD~~~~ 130 (179)
..+.+||+|++.....
T Consensus 112 ~~~~~fD~v~~~~~l~ 127 (227)
T 3e8s_A 112 PVGKDYDLICANFALL 127 (227)
T ss_dssp CCCCCEEEEEEESCCC
T ss_pred ccCCCccEEEECchhh
Confidence 2344699999976644
No 107
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.63 E-value=3.1e-08 Score=79.16 Aligned_cols=67 Identities=22% Similarity=0.283 Sum_probs=54.6
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~ 107 (179)
++++.+|||+|||+|.++..++++. ..|+|+|+++.. ..+++.++++|+.+.+
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~- 82 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYV---------------QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP- 82 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGS---------------SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhC---------------CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC-
Confidence 3788999999999999999998763 589999999831 2468999999998754
Q ss_pred HHHHHhhcCCCCccEEeeCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~ 128 (179)
++++.||+|++...
T Consensus 83 -------~~~~~fD~v~~~~~ 96 (239)
T 1xxl_A 83 -------FPDDSFDIITCRYA 96 (239)
T ss_dssp -------SCTTCEEEEEEESC
T ss_pred -------CCCCcEEEEEECCc
Confidence 45578999999754
No 108
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.63 E-value=4.7e-08 Score=76.66 Aligned_cols=68 Identities=19% Similarity=0.266 Sum_probs=53.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-----CCeeEEecccc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-----EGVIQVQGDIT 103 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-----~~v~~i~gDi~ 103 (179)
.++.+|||||||+|.++..++++.+ ...|+|+|+++.. .. .+++++++|+.
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSF-------------FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT 94 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTT-------------CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCC-------------CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc
Confidence 4678999999999999999998754 4699999999831 12 27999999987
Q ss_pred chhhHHHHHhhcCCCCccEEeeCCC
Q 030299 104 NARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 104 ~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
..+ ...++||+|++...
T Consensus 95 ~~~--------~~~~~fD~v~~~~~ 111 (217)
T 3jwh_A 95 YQD--------KRFHGYDAATVIEV 111 (217)
T ss_dssp SCC--------GGGCSCSEEEEESC
T ss_pred ccc--------ccCCCcCEEeeHHH
Confidence 654 23368999998654
No 109
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.63 E-value=9e-08 Score=74.23 Aligned_cols=65 Identities=20% Similarity=0.146 Sum_probs=53.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCeeEEeccccchhhHHHHHh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
.++.+|||+|||+|.++..+++. + ...|+|+|+++.. ...+++++++|+.+.
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~-------- 107 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-G-------------AESVTAFDIDPDAIETAKRNCGGVNFMVADVSEI-------- 107 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-T-------------BSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGC--------
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-C-------------CCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHC--------
Confidence 46789999999999999999886 3 3589999999831 123899999999874
Q ss_pred hcCCCCccEEeeCCCC
Q 030299 114 HFDGCKADLVVCDGAP 129 (179)
Q Consensus 114 ~~~~~~~D~VlsD~~~ 129 (179)
+ ..||+|++|.+.
T Consensus 108 --~-~~~D~v~~~~p~ 120 (200)
T 1ne2_A 108 --S-GKYDTWIMNPPF 120 (200)
T ss_dssp --C-CCEEEEEECCCC
T ss_pred --C-CCeeEEEECCCc
Confidence 2 479999999764
No 110
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.63 E-value=1.4e-07 Score=75.19 Aligned_cols=74 Identities=12% Similarity=0.140 Sum_probs=56.8
Q ss_pred CCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC--------CCCCCeeEEeccccchhhHH
Q 030299 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM--------APIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 38 ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~--------~~~~~v~~i~gDi~~~~~~~ 109 (179)
.++++.+|||||||+|.++..++++. ..|+|+|+++. .+..++.++++|+.+.+...
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~---------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~ 117 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFF---------------PRVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAA 117 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHS---------------SCEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHH
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhC---------------CCEEEEECCHHHHHHHHHhCcccCceEEECccccccccc
Confidence 35788999999999999999999874 47999999983 12348999999999976432
Q ss_pred HHHhhcCCCCccEEeeCCCC
Q 030299 110 VVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~~ 129 (179)
.+.. +..||+|++....
T Consensus 118 ~~~~---~~~~d~v~~~~~~ 134 (245)
T 3ggd_A 118 QIHS---EIGDANIYMRTGF 134 (245)
T ss_dssp HHHH---HHCSCEEEEESSS
T ss_pred cccc---ccCccEEEEcchh
Confidence 2211 1259999998654
No 111
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.63 E-value=1e-07 Score=80.43 Aligned_cols=74 Identities=18% Similarity=0.156 Sum_probs=56.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CC-CCeeEEeccccchhhHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PI-EGVIQVQGDITNARTAE 109 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---------~~-~~v~~i~gDi~~~~~~~ 109 (179)
+++.+|||+|||+|+++..++++.+ .++|+|+|+++.. .. .+++++++|+.+.+.
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~-------------~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~-- 89 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCP-------------GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADF-- 89 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCT-------------TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHH--
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCC-------------CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHH--
Confidence 6888999999999999999999874 4799999999831 11 579999999887642
Q ss_pred HHHhhcCCCCccEEeeCCCC
Q 030299 110 VVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~~ 129 (179)
........+||.|++|.+.
T Consensus 90 -~l~~~g~~~~D~Vl~D~gv 108 (301)
T 1m6y_A 90 -LLKTLGIEKVDGILMDLGV 108 (301)
T ss_dssp -HHHHTTCSCEEEEEEECSC
T ss_pred -HHHhcCCCCCCEEEEcCcc
Confidence 1111222479999998754
No 112
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.63 E-value=3.9e-08 Score=74.18 Aligned_cols=70 Identities=14% Similarity=0.079 Sum_probs=52.8
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCCC-CeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------APIE-GVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~~~~-~v~~i~gDi~~~~ 106 (179)
+.++.+|||+|||+|.++..++++.+ ..+|+|+|+++. ...+ ++ ++++|..+.-
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~ 88 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTP-------------QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAF 88 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSS-------------SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGG
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCC-------------CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhh
Confidence 37888999999999999999998864 579999999983 1234 67 8888886521
Q ss_pred hHHHHHhhcCCCCccEEeeCCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
. ...++||+|+++...
T Consensus 89 ~-------~~~~~~D~i~~~~~~ 104 (178)
T 3hm2_A 89 D-------DVPDNPDVIFIGGGL 104 (178)
T ss_dssp G-------GCCSCCSEEEECC-T
T ss_pred h-------ccCCCCCEEEECCcc
Confidence 1 112689999987754
No 113
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.62 E-value=1e-07 Score=78.17 Aligned_cols=68 Identities=18% Similarity=0.269 Sum_probs=55.8
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~ 106 (179)
+.++.+|||+|||+|.++..++++.+ ..|+|+|+++.. .+ +++.++++|+.+.+
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 145 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFG--------------VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP 145 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--------------CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhC--------------CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC
Confidence 47889999999999999999999864 689999999831 12 57999999998864
Q ss_pred hHHHHHhhcCCCCccEEeeCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
+++++||+|++...
T Consensus 146 --------~~~~~fD~v~~~~~ 159 (297)
T 2o57_A 146 --------CEDNSYDFIWSQDA 159 (297)
T ss_dssp --------SCTTCEEEEEEESC
T ss_pred --------CCCCCEeEEEecch
Confidence 45678999998754
No 114
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.62 E-value=7.8e-08 Score=78.77 Aligned_cols=68 Identities=25% Similarity=0.290 Sum_probs=55.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~ 108 (179)
.++.+|||+|||+|.++..++...+ ...|+|+|+++.. ..++++++++|+.+.
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~-------------~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~--- 171 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERP-------------DCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA--- 171 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCT-------------TSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG---
T ss_pred cCCCEEEEecCCccHHHHHHHHhCC-------------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh---
Confidence 5678999999999999999998865 5799999999831 245799999999874
Q ss_pred HHHHhhcCCCCccEEeeCCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~~ 129 (179)
++.++||+|+++.+.
T Consensus 172 ------~~~~~fD~Iv~npPy 186 (276)
T 2b3t_A 172 ------LAGQQFAMIVSNPPY 186 (276)
T ss_dssp ------GTTCCEEEEEECCCC
T ss_pred ------cccCCccEEEECCCC
Confidence 224589999998654
No 115
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.62 E-value=1e-07 Score=77.22 Aligned_cols=75 Identities=13% Similarity=0.088 Sum_probs=56.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~~ 107 (179)
.++.+|||||||+|.++.++++.++. .++|+++|+++.. .+ .+++++++|+.+...
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~------------~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~ 126 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPD------------DGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLH 126 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCT------------TCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHH
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCC------------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH
Confidence 46789999999999999999998753 5899999999841 12 479999999876421
Q ss_pred HHHHHhhcCCCCccEEeeCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~ 128 (179)
.+......++||+|++|+.
T Consensus 127 --~~~~~~~~~~fD~V~~d~~ 145 (242)
T 3r3h_A 127 --SLLNEGGEHQFDFIFIDAD 145 (242)
T ss_dssp --HHHHHHCSSCEEEEEEESC
T ss_pred --HHhhccCCCCEeEEEEcCC
Confidence 1111111368999999974
No 116
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.61 E-value=5.9e-08 Score=73.65 Aligned_cols=66 Identities=21% Similarity=0.312 Sum_probs=54.4
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------CCCCCeeEEeccccchhhHHHHH
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------APIEGVIQVQGDITNARTAEVVI 112 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~------~~~~~v~~i~gDi~~~~~~~~l~ 112 (179)
++++.+|||+|||+|.++..+++. + ..|+|+|+++. +..+++.++++|+.+.+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~-~--------------~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~------ 102 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ-G--------------HDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQ------ 102 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSC------
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC-C--------------CcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCC------
Confidence 578999999999999999999886 3 68999999983 12467899999998854
Q ss_pred hhcCCCCccEEeeCC
Q 030299 113 RHFDGCKADLVVCDG 127 (179)
Q Consensus 113 ~~~~~~~~D~VlsD~ 127 (179)
+++++||+|++++
T Consensus 103 --~~~~~~D~i~~~~ 115 (195)
T 3cgg_A 103 --ISETDFDLIVSAG 115 (195)
T ss_dssp --CCCCCEEEEEECC
T ss_pred --CCCCceeEEEECC
Confidence 3456899999974
No 117
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.61 E-value=3.2e-08 Score=79.13 Aligned_cols=67 Identities=22% Similarity=0.285 Sum_probs=55.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCeeEEeccccchhhHHHHHh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
.++.+|||||||+|.++..++++.+ ...|+|+|+++.. ..+++.++++|+.+.+
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~-------------~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 91 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYG-------------VNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK------- 91 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHC-------------TTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-------
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCC-------------CCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-------
Confidence 6788999999999999999999875 4789999999831 2468999999998753
Q ss_pred hcCCCCccEEeeCCC
Q 030299 114 HFDGCKADLVVCDGA 128 (179)
Q Consensus 114 ~~~~~~~D~VlsD~~ 128 (179)
++.+||+|++...
T Consensus 92 --~~~~fD~v~~~~~ 104 (259)
T 2p35_A 92 --PAQKADLLYANAV 104 (259)
T ss_dssp --CSSCEEEEEEESC
T ss_pred --ccCCcCEEEEeCc
Confidence 2468999999654
No 118
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.61 E-value=4.5e-08 Score=78.44 Aligned_cols=70 Identities=13% Similarity=0.048 Sum_probs=55.0
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC--CCeeEEeccccchhh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI--EGVIQVQGDITNART 107 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~--~~v~~i~gDi~~~~~ 107 (179)
++.+|||||||+|..+.++++.+++ .++|+++|+++.. .. .+++++.+|+.+..
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~------------~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l- 122 (221)
T 3dr5_A 56 GSTGAIAITPAAGLVGLYILNGLAD------------NTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVM- 122 (221)
T ss_dssp TCCEEEEESTTHHHHHHHHHHHSCT------------TSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHG-
T ss_pred CCCCEEEEcCCchHHHHHHHHhCCC------------CCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHH-
Confidence 3459999999999999999998753 5899999999831 23 37999999987742
Q ss_pred HHHHHhhcCCCCccEEeeCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~ 128 (179)
..+.+++||+|++|+.
T Consensus 123 -----~~~~~~~fD~V~~d~~ 138 (221)
T 3dr5_A 123 -----SRLANDSYQLVFGQVS 138 (221)
T ss_dssp -----GGSCTTCEEEEEECCC
T ss_pred -----HHhcCCCcCeEEEcCc
Confidence 1233568999999974
No 119
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.61 E-value=2.8e-08 Score=78.26 Aligned_cols=74 Identities=15% Similarity=0.151 Sum_probs=55.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCCC-CeeEEeccccchhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------APIE-GVIQVQGDITNART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~~~~-~v~~i~gDi~~~~~ 107 (179)
.++.+|||||||+|.++.++++.+++ .++|+++|+++. .... +++++++|+.+...
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 124 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSS------------GGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQ 124 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCS------------SCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHH
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCC------------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH
Confidence 56889999999999999999998753 579999999983 1233 49999999976421
Q ss_pred HHHHHhhcCCCCccEEeeCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~ 128 (179)
.+... ...+||+|++|+.
T Consensus 125 --~~~~~-~~~~fD~v~~d~~ 142 (223)
T 3duw_A 125 --QIENE-KYEPFDFIFIDAD 142 (223)
T ss_dssp --HHHHT-TCCCCSEEEECSC
T ss_pred --HHHhc-CCCCcCEEEEcCC
Confidence 12111 1257999999976
No 120
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.61 E-value=1.1e-07 Score=80.10 Aligned_cols=72 Identities=17% Similarity=0.150 Sum_probs=54.3
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------------------CCCCee
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------------PIEGVI 96 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------------------~~~~v~ 96 (179)
+.++.+|||+|||+|.++..+++..++ .++|+|+|+++.. ...+++
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~ 170 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGS------------QGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD 170 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCT------------TCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEE
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCC------------CceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceE
Confidence 478999999999999999999998753 5899999999821 025799
Q ss_pred EEeccccchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 97 QVQGDITNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 97 ~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
++.+|+.+... .+++..||+|++|+.
T Consensus 171 ~~~~d~~~~~~------~~~~~~fD~V~~~~~ 196 (336)
T 2b25_A 171 FIHKDISGATE------DIKSLTFDAVALDML 196 (336)
T ss_dssp EEESCTTCCC-------------EEEEEECSS
T ss_pred EEECChHHccc------ccCCCCeeEEEECCC
Confidence 99999987521 133457999999875
No 121
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.60 E-value=9e-08 Score=81.42 Aligned_cols=68 Identities=15% Similarity=0.239 Sum_probs=55.3
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CC-CCeeEEeccccchhh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNART 107 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~-~~v~~i~gDi~~~~~ 107 (179)
+.++.+|||||||+|.++..++++ + ..+|+|+|+++|. .. ++++++++|+.+.+
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~-g-------------~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~- 126 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA-G-------------AKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVH- 126 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-T-------------CSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC-
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc-C-------------CCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhc-
Confidence 367889999999999999999886 3 3689999999851 12 57999999999864
Q ss_pred HHHHHhhcCCCCccEEeeCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~ 128 (179)
++.++||+|+++..
T Consensus 127 -------~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 127 -------LPVEKVDVIISEWM 140 (340)
T ss_dssp -------CSCSCEEEEEECCC
T ss_pred -------CCCCcEEEEEEcCc
Confidence 44568999999864
No 122
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.60 E-value=7.3e-08 Score=77.10 Aligned_cols=69 Identities=20% Similarity=0.230 Sum_probs=56.2
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------------CCCCeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------PIEGVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------------~~~~v~~i~gDi~~~~ 106 (179)
++++.+|||+|||+|.++..+++.+++ .+.|+++|+++.. ..++++++++|+.+.+
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~------------~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~ 161 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGE------------KGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE 161 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCT------------TSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCC------------CCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC
Confidence 478999999999999999999998653 5799999999831 2367999999998753
Q ss_pred hHHHHHhhcCCCCccEEeeCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~ 127 (179)
+++..||+|++|.
T Consensus 162 --------~~~~~~D~v~~~~ 174 (258)
T 2pwy_A 162 --------LEEAAYDGVALDL 174 (258)
T ss_dssp --------CCTTCEEEEEEES
T ss_pred --------CCCCCcCEEEECC
Confidence 3456899999975
No 123
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.60 E-value=4.8e-08 Score=76.60 Aligned_cols=68 Identities=15% Similarity=0.144 Sum_probs=53.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-----CCeeEEecccc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-----EGVIQVQGDIT 103 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-----~~v~~i~gDi~ 103 (179)
.++.+|||||||+|.++..++++.+ ...|+|+|+++.. .+ ++++++++|+.
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKS-------------FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLV 94 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTT-------------CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSS
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCC-------------CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccc
Confidence 4678999999999999999988754 4799999999831 11 17999999997
Q ss_pred chhhHHHHHhhcCCCCccEEeeCCC
Q 030299 104 NARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 104 ~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
..+ ...++||+|++...
T Consensus 95 ~~~--------~~~~~fD~V~~~~~ 111 (219)
T 3jwg_A 95 YRD--------KRFSGYDAATVIEV 111 (219)
T ss_dssp SCC--------GGGTTCSEEEEESC
T ss_pred ccc--------cccCCCCEEEEHHH
Confidence 654 23468999998653
No 124
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.60 E-value=3.9e-08 Score=76.67 Aligned_cols=71 Identities=11% Similarity=-0.049 Sum_probs=55.2
Q ss_pred HHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----CCCCeeEEeccccchhhH
Q 030299 34 EEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 34 ~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----~~~~v~~i~gDi~~~~~~ 108 (179)
+....+.++.+|||||||+|.++..++++ + ..|+|+|+++.. ...++.++.+|+.+.+
T Consensus 36 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~-- 98 (211)
T 3e23_A 36 KFLGELPAGAKILELGCGAGYQAEAMLAA-G--------------FDVDATDGSPELAAEASRRLGRPVRTMLFHQLD-- 98 (211)
T ss_dssp HHHTTSCTTCEEEESSCTTSHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHTSCCEECCGGGCC--
T ss_pred HHHHhcCCCCcEEEECCCCCHHHHHHHHc-C--------------CeEEEECCCHHHHHHHHHhcCCceEEeeeccCC--
Confidence 33445678999999999999999999886 2 689999999831 1126778899988754
Q ss_pred HHHHhhcCCCCccEEeeCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~ 128 (179)
.++.||+|++...
T Consensus 99 -------~~~~fD~v~~~~~ 111 (211)
T 3e23_A 99 -------AIDAYDAVWAHAC 111 (211)
T ss_dssp -------CCSCEEEEEECSC
T ss_pred -------CCCcEEEEEecCc
Confidence 3568999999764
No 125
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.59 E-value=1.6e-07 Score=71.23 Aligned_cols=65 Identities=14% Similarity=0.199 Sum_probs=53.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCC--eeEEeccccchh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEG--VIQVQGDITNAR 106 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~--v~~i~gDi~~~~ 106 (179)
+++.+|||+|||+|.++..++++ + ..|+|+|+++.. ..++ ++++++|+.+..
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~-~--------------~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~ 115 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE-V--------------KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV 115 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG-S--------------SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-C--------------CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc
Confidence 57889999999999999999887 3 689999999831 2455 999999998742
Q ss_pred hHHHHHhhcCCCCccEEeeCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
.+.+||+|+++..
T Consensus 116 ---------~~~~~D~v~~~~~ 128 (194)
T 1dus_A 116 ---------KDRKYNKIITNPP 128 (194)
T ss_dssp ---------TTSCEEEEEECCC
T ss_pred ---------ccCCceEEEECCC
Confidence 3468999999864
No 126
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.59 E-value=1.6e-07 Score=75.99 Aligned_cols=71 Identities=15% Similarity=0.198 Sum_probs=55.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCC-CCeeEEeccccchhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------API-EGVIQVQGDITNART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~~~-~~v~~i~gDi~~~~~ 107 (179)
.++.+|||||||+|.++..+++.+++ .++|+++|+++. ... .+++++.+|+.+...
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~------------~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~ 129 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPA------------DGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLE 129 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCT------------TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHH
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCC------------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH
Confidence 57889999999999999999998753 589999999983 123 379999999876321
Q ss_pred HHHHHhhcC-CCCccEEeeCCC
Q 030299 108 AEVVIRHFD-GCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~-~~~~D~VlsD~~ 128 (179)
.+. .++||+|++|+.
T Consensus 130 ------~~~~~~~fD~V~~d~~ 145 (248)
T 3tfw_A 130 ------SLGECPAFDLIFIDAD 145 (248)
T ss_dssp ------TCCSCCCCSEEEECSC
T ss_pred ------hcCCCCCeEEEEECCc
Confidence 122 348999999874
No 127
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.59 E-value=7.9e-08 Score=75.23 Aligned_cols=68 Identities=21% Similarity=0.245 Sum_probs=54.1
Q ss_pred CCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhh
Q 030299 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNART 107 (179)
Q Consensus 38 ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~ 107 (179)
.++++.+|||||||+|.++..++++. ..|+|+|+++.. ...+++++++|+.+.+
T Consensus 35 ~~~~~~~vLDlG~G~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~- 98 (227)
T 1ve3_A 35 YMKKRGKVLDLACGVGGFSFLLEDYG---------------FEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS- 98 (227)
T ss_dssp SCCSCCEEEEETCTTSHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC-
T ss_pred hcCCCCeEEEEeccCCHHHHHHHHcC---------------CEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCC-
Confidence 34678899999999999999988763 489999999831 1267999999998854
Q ss_pred HHHHHhhcCCCCccEEeeCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~ 128 (179)
+++++||+|++...
T Consensus 99 -------~~~~~~D~v~~~~~ 112 (227)
T 1ve3_A 99 -------FEDKTFDYVIFIDS 112 (227)
T ss_dssp -------SCTTCEEEEEEESC
T ss_pred -------CCCCcEEEEEEcCc
Confidence 34568999999754
No 128
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.58 E-value=9.5e-08 Score=74.28 Aligned_cols=66 Identities=15% Similarity=0.106 Sum_probs=53.0
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~ 107 (179)
++++.+|||+|||+|.++..+++. + ...|+|+|+++.. ...+++++++|+.+.
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~-~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-- 121 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL-G-------------AKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD-- 121 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT-T-------------CSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT--
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC-C-------------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc--
Confidence 478899999999999999998864 3 3699999999831 234589999999774
Q ss_pred HHHHHhhcCCCCccEEeeCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~ 128 (179)
..++||+|+++..
T Consensus 122 --------~~~~fD~i~~~~~ 134 (205)
T 3grz_A 122 --------VDGKFDLIVANIL 134 (205)
T ss_dssp --------CCSCEEEEEEESC
T ss_pred --------CCCCceEEEECCc
Confidence 2368999999864
No 129
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.58 E-value=8.8e-08 Score=77.19 Aligned_cols=70 Identities=11% Similarity=0.116 Sum_probs=54.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------------------CCCCeeEEec
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------------PIEGVIQVQG 100 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-------------------~~~~v~~i~g 100 (179)
+++.+|||||||+|.++..++.+.+ ...|+|+|+++.. .++|+.++++
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~-------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~ 114 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFP-------------EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRG 114 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHST-------------TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEEC
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCC-------------CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEec
Confidence 4778999999999999999999864 4799999999721 3468999999
Q ss_pred cccchhhHHHHHhhcCCCCccEEeeCC
Q 030299 101 DITNARTAEVVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 101 Di~~~~~~~~l~~~~~~~~~D~VlsD~ 127 (179)
|+.+... ..+....+|.|+...
T Consensus 115 D~~~~l~-----~~~~~~~~d~v~~~~ 136 (246)
T 2vdv_E 115 NAMKFLP-----NFFEKGQLSKMFFCF 136 (246)
T ss_dssp CTTSCGG-----GTSCTTCEEEEEEES
T ss_pred cHHHHHH-----HhccccccCEEEEEC
Confidence 9987311 124556788887654
No 130
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.57 E-value=8.9e-08 Score=77.88 Aligned_cols=70 Identities=16% Similarity=0.116 Sum_probs=56.7
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------------C--CCCeeEEeccccc
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------P--IEGVIQVQGDITN 104 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------------~--~~~v~~i~gDi~~ 104 (179)
++++.+|||+|||+|.++..+++.+++ .+.|+++|+++.. . ..++.++++|+.+
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~------------~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~ 164 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGP------------AGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD 164 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCT------------TSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCC------------CCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh
Confidence 478899999999999999999998753 5799999999831 1 3579999999987
Q ss_pred hhhHHHHHhhcCCCCccEEeeCCC
Q 030299 105 ARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 105 ~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
.. +++..||+|++|+.
T Consensus 165 ~~--------~~~~~~D~v~~~~~ 180 (280)
T 1i9g_A 165 SE--------LPDGSVDRAVLDML 180 (280)
T ss_dssp CC--------CCTTCEEEEEEESS
T ss_pred cC--------CCCCceeEEEECCc
Confidence 53 34568999999764
No 131
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.57 E-value=6e-08 Score=78.46 Aligned_cols=68 Identities=15% Similarity=0.173 Sum_probs=55.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCeeEEeccccchhhHHHHHh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
.++.+|||+|||+|.++..+++..+ ...|+|+|+++.. ..+++.++++|+.+.+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 143 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-------------EITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLP------- 143 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-------------TSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCS-------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-------------CCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCC-------
Confidence 5788999999999999999998864 4699999999831 2467889999998754
Q ss_pred hcCCCCccEEeeCCC
Q 030299 114 HFDGCKADLVVCDGA 128 (179)
Q Consensus 114 ~~~~~~~D~VlsD~~ 128 (179)
+.+++||+|++...
T Consensus 144 -~~~~~fD~v~~~~~ 157 (269)
T 1p91_A 144 -FSDTSMDAIIRIYA 157 (269)
T ss_dssp -BCTTCEEEEEEESC
T ss_pred -CCCCceeEEEEeCC
Confidence 34568999998654
No 132
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.56 E-value=6.6e-08 Score=77.35 Aligned_cols=70 Identities=16% Similarity=0.117 Sum_probs=54.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCC-CCeeEEeccccchhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------API-EGVIQVQGDITNART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~~~-~~v~~i~gDi~~~~~ 107 (179)
.++.+|||||||+|.++..+++..+ .++|+++|+++. ..+ ++++++.+|+.+...
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 136 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISD-------------DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFE 136 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCT-------------TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHH
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCC-------------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHH
Confidence 4678999999999999999998543 589999999983 123 379999999987421
Q ss_pred HHHHHhhcCCCCccEEeeCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~ 128 (179)
. .+ +.+||+|++|+.
T Consensus 137 ~-----~~-~~~fD~V~~~~~ 151 (232)
T 3ntv_A 137 N-----VN-DKVYDMIFIDAA 151 (232)
T ss_dssp H-----HT-TSCEEEEEEETT
T ss_pred h-----hc-cCCccEEEEcCc
Confidence 0 12 468999999875
No 133
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.56 E-value=6.8e-08 Score=78.78 Aligned_cols=70 Identities=17% Similarity=0.051 Sum_probs=54.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~ 108 (179)
.++.+|||||||+|..+..++...+ ..+|+|+|+++.. .+.+++++++|+.+....
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~ 145 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRP-------------ELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLARE 145 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCT-------------TCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCC-------------CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcc
Confidence 4678999999999999999998865 5899999999831 356799999999875310
Q ss_pred HHHHhhcCCCCccEEeeCC
Q 030299 109 EVVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~ 127 (179)
.....+||+|+|..
T Consensus 146 -----~~~~~~fD~I~s~a 159 (249)
T 3g89_A 146 -----AGHREAYARAVARA 159 (249)
T ss_dssp -----TTTTTCEEEEEEES
T ss_pred -----cccCCCceEEEECC
Confidence 01136899999965
No 134
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.56 E-value=2.6e-07 Score=73.57 Aligned_cols=67 Identities=21% Similarity=0.190 Sum_probs=53.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CCCCCeeEEeccccchhhHHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------APIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~~~~~v~~i~gDi~~~~~~~~ 110 (179)
.++.+|||||||+|.++..++++.. ..|+|+|+++. ....++.++++|+.+.+
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~---- 153 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLY--------------ATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETAT---- 153 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHC--------------SEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCC----
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhc--------------CEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCC----
Confidence 5688999999999999999998852 58999999983 11257899999998854
Q ss_pred HHhhcCCCCccEEeeCCC
Q 030299 111 VIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 111 l~~~~~~~~~D~VlsD~~ 128 (179)
++++.||+|++...
T Consensus 154 ----~~~~~fD~v~~~~~ 167 (254)
T 1xtp_A 154 ----LPPNTYDLIVIQWT 167 (254)
T ss_dssp ----CCSSCEEEEEEESC
T ss_pred ----CCCCCeEEEEEcch
Confidence 34568999998653
No 135
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.56 E-value=1.4e-07 Score=78.07 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=32.0
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCC
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP 88 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~ 88 (179)
++.+|||||||+|.++..++.+.+ ...|+|+|+++
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~-------------~~~v~gvDis~ 80 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWG-------------PSRMVGLDIDS 80 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTC-------------CSEEEEEESCH
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcC-------------CCEEEEECCCH
Confidence 578999999999999999999976 47999999997
No 136
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.56 E-value=1.5e-07 Score=76.78 Aligned_cols=68 Identities=12% Similarity=0.153 Sum_probs=54.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~~ 107 (179)
.++.+|||||||+|.++..++++ + ..|+|+|+++.. .. ++++++++|+.+.+.
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~-~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 131 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER-G--------------HQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVAS 131 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGG
T ss_pred CCCCEEEEeCCcchHHHHHHHHC-C--------------CEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhh
Confidence 34779999999999999999887 3 689999999831 12 578999999988652
Q ss_pred HHHHHhhcCCCCccEEeeCCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
+.+++||+|++....
T Consensus 132 -------~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 132 -------HLETPVDLILFHAVL 146 (285)
T ss_dssp -------GCSSCEEEEEEESCG
T ss_pred -------hcCCCceEEEECchh
Confidence 345789999997643
No 137
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.55 E-value=1.6e-07 Score=75.47 Aligned_cols=71 Identities=13% Similarity=0.125 Sum_probs=53.8
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CeeEEeccccch-hh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNA-RT 107 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~-~v~~i~gDi~~~-~~ 107 (179)
++.+|||||||+|.++..++.+.+ ...|+|+|+++.. .+. +++++++|+.+. ..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 131 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-------------GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMD 131 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-------------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTT
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-------------CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhh
Confidence 578999999999999999998875 4799999999831 233 489999998762 10
Q ss_pred HHHHHhhcC---CCCccEEeeCCCCC
Q 030299 108 AEVVIRHFD---GCKADLVVCDGAPD 130 (179)
Q Consensus 108 ~~~l~~~~~---~~~~D~VlsD~~~~ 130 (179)
.++ +.+||+|+++.+..
T Consensus 132 ------~~~~~~~~~fD~i~~npp~~ 151 (254)
T 2h00_A 132 ------ALKEESEIIYDFCMCNPPFF 151 (254)
T ss_dssp ------TSTTCCSCCBSEEEECCCCC
T ss_pred ------hhhcccCCcccEEEECCCCc
Confidence 122 25799999996543
No 138
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.55 E-value=6.2e-07 Score=77.19 Aligned_cols=68 Identities=16% Similarity=0.187 Sum_probs=54.3
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CC-CCeeEEeccccchhh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNART 107 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~-~~v~~i~gDi~~~~~ 107 (179)
+.++.+|||||||+|.++..++++ + ..+|+|+|+++|. .+ .+++++++|+.+.+
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~-g-------------~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 125 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQA-G-------------ARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDIS- 125 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHT-T-------------CSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCC-
T ss_pred cCCCCEEEEeccCcCHHHHHHHhc-C-------------CCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcC-
Confidence 367889999999999999999887 3 2599999999752 12 34899999998865
Q ss_pred HHHHHhhcCCCCccEEeeCCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
++ ++||+|+++...
T Consensus 126 -------~~-~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 126 -------LP-EKVDVIISEWMG 139 (376)
T ss_dssp -------CS-SCEEEEEECCCB
T ss_pred -------cC-CcceEEEEcChh
Confidence 33 689999997643
No 139
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.55 E-value=3.1e-07 Score=74.95 Aligned_cols=64 Identities=20% Similarity=0.107 Sum_probs=52.9
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~~ 109 (179)
++.+|||+|||+|.++..++++ + ..|+|+|+++.. .. +++++++|+.+..
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~-g--------------~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~--- 180 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL-G--------------YDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAAN--- 180 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCC---
T ss_pred CCCcEEEECCCCCHHHHHHHHC-C--------------CeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEecccccc---
Confidence 7889999999999999999887 3 589999999831 12 7899999998864
Q ss_pred HHHhhcCCCCccEEeeCCCC
Q 030299 110 VVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~~ 129 (179)
+ +++||+|++....
T Consensus 181 -----~-~~~fD~i~~~~~~ 194 (286)
T 3m70_A 181 -----I-QENYDFIVSTVVF 194 (286)
T ss_dssp -----C-CSCEEEEEECSSG
T ss_pred -----c-cCCccEEEEccch
Confidence 2 4689999998753
No 140
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.55 E-value=1.9e-07 Score=77.48 Aligned_cols=65 Identities=9% Similarity=-0.001 Sum_probs=52.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~~ 107 (179)
.++.+|||+|||+|.++..++++.+ ..|+|+|+++.. .+ +++.++++|+.+.
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 152 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFD--------------VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF-- 152 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC--------------CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC--
T ss_pred CCcCEEEEEcccchHHHHHHHHHCC--------------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC--
Confidence 6789999999999999999998864 699999999831 12 4689999998763
Q ss_pred HHHHHhhcCCCCccEEeeCCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
+ ++||+|++....
T Consensus 153 --------~-~~fD~v~~~~~l 165 (318)
T 2fk8_A 153 --------A-EPVDRIVSIEAF 165 (318)
T ss_dssp --------C-CCCSEEEEESCG
T ss_pred --------C-CCcCEEEEeChH
Confidence 2 579999987653
No 141
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.54 E-value=2.8e-07 Score=77.01 Aligned_cols=70 Identities=9% Similarity=0.006 Sum_probs=52.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------------C--CCCeeEEeccccc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------P--IEGVIQVQGDITN 104 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-------------~--~~~v~~i~gDi~~ 104 (179)
.++.+|||||||+|+.+..+++..+ ..+|+++|+++.. . .++++++.+|+.+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~-------------~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~ 155 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDS-------------VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAE 155 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTT-------------CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCC-------------CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHH
Confidence 4568999999999999999987643 4799999999831 0 3579999999876
Q ss_pred hhhHHHHHhhcCCCCccEEeeCCCC
Q 030299 105 ARTAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 105 ~~~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
... ..+++||+|++|...
T Consensus 156 ~l~-------~~~~~fD~Ii~d~~~ 173 (296)
T 1inl_A 156 YVR-------KFKNEFDVIIIDSTD 173 (296)
T ss_dssp HGG-------GCSSCEEEEEEEC--
T ss_pred HHh-------hCCCCceEEEEcCCC
Confidence 421 124579999999753
No 142
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.54 E-value=1.5e-07 Score=74.00 Aligned_cols=75 Identities=15% Similarity=0.120 Sum_probs=55.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCCC-CeeEEeccccchhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------APIE-GVIQVQGDITNART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~~~~-~v~~i~gDi~~~~~ 107 (179)
.++.+|||||||+|.++.++++.++. .++|+++|+++. .... +++++++|+.+...
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 130 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPK------------DGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLA 130 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCT------------TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHH
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCC------------CCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHH
Confidence 46789999999999999999998753 589999999983 1233 59999999876421
Q ss_pred HHHHHhhcCCCCccEEeeCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~ 128 (179)
.+.......+||+|++|+.
T Consensus 131 --~~~~~~~~~~fD~v~~~~~ 149 (225)
T 3tr6_A 131 --ELIHAGQAWQYDLIYIDAD 149 (225)
T ss_dssp --HHHTTTCTTCEEEEEECSC
T ss_pred --HhhhccCCCCccEEEECCC
Confidence 1111111168999999874
No 143
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.54 E-value=1.2e-07 Score=72.07 Aligned_cols=71 Identities=17% Similarity=0.059 Sum_probs=53.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~~ 107 (179)
.++.+|||+|||+|.++..++.+ + ..+|+|+|+++.. .+ ++++++++|+.+...
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 108 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-G-------------MDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALE 108 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-T-------------CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHH
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-C-------------CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHH
Confidence 57889999999999999998874 3 3699999999831 12 468999999987431
Q ss_pred HHHHHhhcCCCCccEEeeCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~ 128 (179)
.+. ....+||+|++|.+
T Consensus 109 --~~~--~~~~~fD~i~~~~~ 125 (187)
T 2fhp_A 109 --QFY--EEKLQFDLVLLDPP 125 (187)
T ss_dssp --HHH--HTTCCEEEEEECCC
T ss_pred --HHH--hcCCCCCEEEECCC
Confidence 111 12468999999865
No 144
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.54 E-value=5.9e-07 Score=76.26 Aligned_cols=71 Identities=14% Similarity=0.048 Sum_probs=57.1
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCCCCeeEEeccccchhh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------APIEGVIQVQGDITNART 107 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~~~~~v~~i~gDi~~~~~ 107 (179)
.+++.+|||+|||+|.++..++...++ ...|+|+|+++. ..+.+++++++|+++.+.
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~------------~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~ 268 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGP------------TSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPR 268 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCT------------TSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGG
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCC------------CceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcc
Confidence 367889999999999999999998732 578999999983 123478999999998652
Q ss_pred HHHHHhhcCCCCccEEeeCCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
+...||+|++|.+.
T Consensus 269 --------~~~~~D~Ii~npPy 282 (354)
T 3tma_A 269 --------FFPEVDRILANPPH 282 (354)
T ss_dssp --------TCCCCSEEEECCCS
T ss_pred --------ccCCCCEEEECCCC
Confidence 33568999999764
No 145
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.53 E-value=1.3e-07 Score=77.02 Aligned_cols=65 Identities=14% Similarity=0.113 Sum_probs=53.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------CCCCCeeEEeccccchhhHHHHHh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------APIEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~------~~~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
.++.+|||||||+|.++..+++ + ...|+|+|+++. +..+++.++++|+.+.+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~--~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 113 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ--S-------------GAEVLGTDNAATMIEKARQNYPHLHFDVADARNFR------- 113 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH--T-------------TCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCC-------
T ss_pred CCCCEEEEecCCCCHHHHHHHh--C-------------CCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCC-------
Confidence 6788999999999999999988 2 479999999983 12468999999998854
Q ss_pred hcCCCCccEEeeCCC
Q 030299 114 HFDGCKADLVVCDGA 128 (179)
Q Consensus 114 ~~~~~~~D~VlsD~~ 128 (179)
+ +.+||+|++...
T Consensus 114 -~-~~~fD~v~~~~~ 126 (279)
T 3ccf_A 114 -V-DKPLDAVFSNAM 126 (279)
T ss_dssp -C-SSCEEEEEEESC
T ss_pred -c-CCCcCEEEEcch
Confidence 2 358999999764
No 146
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.53 E-value=8.8e-08 Score=77.23 Aligned_cols=65 Identities=14% Similarity=0.225 Sum_probs=53.0
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------CCCCCeeEEeccccchhhHHHHH
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------APIEGVIQVQGDITNARTAEVVI 112 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~------~~~~~v~~i~gDi~~~~~~~~l~ 112 (179)
+.++.+|||||||+|.++..++++ ...|+|+|+++. +..+++.++++|+.+.+
T Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~---------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~------ 106 (263)
T 3pfg_A 48 SPKAASLLDVACGTGMHLRHLADS---------------FGTVEGLELSADMLAIARRRNPDAVLHHGDMRDFS------ 106 (263)
T ss_dssp CTTCCEEEEETCTTSHHHHHHTTT---------------SSEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCC------
T ss_pred CCCCCcEEEeCCcCCHHHHHHHHc---------------CCeEEEEECCHHHHHHHHhhCCCCEEEECChHHCC------
Confidence 356789999999999999999876 258999999983 12458999999999864
Q ss_pred hhcCCCCccEEeeCC
Q 030299 113 RHFDGCKADLVVCDG 127 (179)
Q Consensus 113 ~~~~~~~~D~VlsD~ 127 (179)
+ +.+||+|++..
T Consensus 107 --~-~~~fD~v~~~~ 118 (263)
T 3pfg_A 107 --L-GRRFSAVTCMF 118 (263)
T ss_dssp --C-SCCEEEEEECT
T ss_pred --c-cCCcCEEEEcC
Confidence 2 46899999975
No 147
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.52 E-value=1.2e-07 Score=74.75 Aligned_cols=79 Identities=10% Similarity=0.132 Sum_probs=56.9
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------C-----CCCeeEEeccc
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P-----IEGVIQVQGDI 102 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~-----~~~v~~i~gDi 102 (179)
++++.+|||+|||+|.++..+++..+. ..++.+.|+++|+++.. . ..+++++++|+
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~--------~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 149 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNV--------LENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNI 149 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTT--------TTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCG
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcc--------cCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECCh
Confidence 578899999999999999999998640 00014699999999831 1 35799999999
Q ss_pred cchhhHHHHHhhcCCCCccEEeeCCCC
Q 030299 103 TNARTAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 103 ~~~~~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
.+.... .. ....+||+|+++...
T Consensus 150 ~~~~~~-~~---~~~~~fD~I~~~~~~ 172 (227)
T 2pbf_A 150 YQVNEE-EK---KELGLFDAIHVGASA 172 (227)
T ss_dssp GGCCHH-HH---HHHCCEEEEEECSBB
T ss_pred Hhcccc-cC---ccCCCcCEEEECCch
Confidence 874210 00 013579999998764
No 148
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.52 E-value=7.7e-08 Score=77.46 Aligned_cols=75 Identities=12% Similarity=0.016 Sum_probs=56.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC----------CCCCCeeEEeccccchhhHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----------APIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~----------~~~~~v~~i~gDi~~~~~~~ 109 (179)
.+|.+|||||||+|..+.++++..+ ..|++||++|. ....++.++++|..+..
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~--------------~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~--- 121 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI--------------DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVA--- 121 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE--------------EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHG---
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC--------------cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhc---
Confidence 6789999999999999999987643 57999999983 12346778888887643
Q ss_pred HHHhhcCCCCccEEeeCCCCCCCCC
Q 030299 110 VVIRHFDGCKADLVVCDGAPDVTGL 134 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~~~~~g~ 134 (179)
..+++.+||.|+.|..+.....
T Consensus 122 ---~~~~~~~FD~i~~D~~~~~~~~ 143 (236)
T 3orh_A 122 ---PTLPDGHFDGILYDTYPLSEET 143 (236)
T ss_dssp ---GGSCTTCEEEEEECCCCCBGGG
T ss_pred ---ccccccCCceEEEeeeecccch
Confidence 2356778999999976544433
No 149
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.51 E-value=1.3e-07 Score=75.90 Aligned_cols=54 Identities=15% Similarity=0.073 Sum_probs=44.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCC--C-------C------CCCCeeEEeccccc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP--M-------A------PIEGVIQVQGDITN 104 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~--~-------~------~~~~v~~i~gDi~~ 104 (179)
+++.+|||||||+|.++..++++.+ ...|+|+|+++ | . ..+++.++++|+.+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~-------------~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~ 89 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQ-------------NTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAES 89 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCT-------------TEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTB
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCC-------------CCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHH
Confidence 6888999999999999999987644 57899999994 3 1 24689999999988
Q ss_pred hh
Q 030299 105 AR 106 (179)
Q Consensus 105 ~~ 106 (179)
.+
T Consensus 90 l~ 91 (225)
T 3p2e_A 90 LP 91 (225)
T ss_dssp CC
T ss_pred hh
Confidence 64
No 150
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.51 E-value=2.1e-07 Score=76.06 Aligned_cols=69 Identities=22% Similarity=0.238 Sum_probs=55.5
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~ 106 (179)
+.++.+|||+|||+|.++..+++++++ .+.|+++|+++.. .+ +++.++.+|+.+.
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 176 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGS------------SGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG- 176 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTT------------TCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCC------------CcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-
Confidence 367899999999999999999998643 5799999999831 12 4788999999874
Q ss_pred hHHHHHhhcCCCCccEEeeCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
+++..||+|++|..
T Consensus 177 --------~~~~~~D~V~~~~~ 190 (277)
T 1o54_A 177 --------FDEKDVDALFLDVP 190 (277)
T ss_dssp --------CSCCSEEEEEECCS
T ss_pred --------ccCCccCEEEECCc
Confidence 24468999999863
No 151
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.51 E-value=1.9e-07 Score=72.99 Aligned_cols=71 Identities=20% Similarity=0.151 Sum_probs=55.6
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~ 107 (179)
+.++.+|||+|||+|.++..+++..++ ...|+++|+++.. ..+++.++++|+.....
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 142 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGE------------DGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE 142 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCT------------TSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCC------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC
Confidence 367899999999999999999998742 4799999999831 24679999999865321
Q ss_pred HHHHHhhcCCCCccEEeeCCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
...+||+|+++...
T Consensus 143 --------~~~~fD~v~~~~~~ 156 (215)
T 2yxe_A 143 --------PLAPYDRIYTTAAG 156 (215)
T ss_dssp --------GGCCEEEEEESSBB
T ss_pred --------CCCCeeEEEECCch
Confidence 13579999998754
No 152
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.50 E-value=1.1e-07 Score=79.54 Aligned_cols=71 Identities=18% Similarity=0.135 Sum_probs=56.9
Q ss_pred CCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CeeEEeccccch
Q 030299 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNA 105 (179)
Q Consensus 38 ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~-~v~~i~gDi~~~ 105 (179)
++++|.+|||+|||+|.++..++.+. ..+|+|+|++|.. .+. .++++++|.++.
T Consensus 122 ~~~~g~~VlD~~aG~G~~~i~~a~~g--------------~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~ 187 (278)
T 3k6r_A 122 VAKPDELVVDMFAGIGHLSLPIAVYG--------------KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF 187 (278)
T ss_dssp HCCTTCEEEETTCTTTTTTHHHHHHT--------------CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC
T ss_pred hcCCCCEEEEecCcCcHHHHHHHHhc--------------CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHh
Confidence 46899999999999999999998863 3689999999941 233 488999999875
Q ss_pred hhHHHHHhhcCCCCccEEeeCCCCCC
Q 030299 106 RTAEVVIRHFDGCKADLVVCDGAPDV 131 (179)
Q Consensus 106 ~~~~~l~~~~~~~~~D~VlsD~~~~~ 131 (179)
. ....||.|+.+.++.+
T Consensus 188 ~---------~~~~~D~Vi~~~p~~~ 204 (278)
T 3k6r_A 188 P---------GENIADRILMGYVVRT 204 (278)
T ss_dssp C---------CCSCEEEEEECCCSSG
T ss_pred c---------cccCCCEEEECCCCcH
Confidence 3 3468999999877643
No 153
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.50 E-value=2.5e-07 Score=78.16 Aligned_cols=67 Identities=13% Similarity=0.251 Sum_probs=53.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CC-CCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~-~~v~~i~gDi~~~~~~ 108 (179)
.++.+|||||||+|.++..++++ + ..+|+|+|++++. .. .+++++++|+.+.+
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~-g-------------~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-- 100 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKH-G-------------AKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVH-- 100 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT-C-------------CSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC--
T ss_pred cCCCEEEEecCccHHHHHHHHHC-C-------------CCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhcc--
Confidence 56789999999999999999886 3 3689999999752 12 35899999998864
Q ss_pred HHHHhhcCCCCccEEeeCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~ 128 (179)
++.++||+|+++..
T Consensus 101 ------~~~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 101 ------LPFPKVDIIISEWM 114 (328)
T ss_dssp ------CSSSCEEEEEECCC
T ss_pred ------CCCCcccEEEEeCc
Confidence 34468999999854
No 154
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.50 E-value=2.9e-07 Score=80.00 Aligned_cols=65 Identities=17% Similarity=0.201 Sum_probs=52.7
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CC-CCeeEEeccccchhhHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNARTAE 109 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~-~~v~~i~gDi~~~~~~~ 109 (179)
+|.+|||||||+|..|..+++. + ..+|+|||.++|. .+ ..|+++++|+++.+
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~a-G-------------A~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~--- 145 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQA-G-------------ARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVE--- 145 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-------------CSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCC---
T ss_pred CCCEEEEeCCCccHHHHHHHHh-C-------------CCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeec---
Confidence 6889999999999999888775 3 3689999999873 12 35899999999875
Q ss_pred HHHhhcCCCCccEEeeCCC
Q 030299 110 VVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~ 128 (179)
++ ++||+|+|...
T Consensus 146 -----lp-e~~DvivsE~~ 158 (376)
T 4hc4_A 146 -----LP-EQVDAIVSEWM 158 (376)
T ss_dssp -----CS-SCEEEEECCCC
T ss_pred -----CC-ccccEEEeecc
Confidence 34 58999999754
No 155
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.49 E-value=1.9e-07 Score=80.77 Aligned_cols=69 Identities=19% Similarity=0.185 Sum_probs=54.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC---CCeeEEeccccch
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI---EGVIQVQGDITNA 105 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~---~~v~~i~gDi~~~ 105 (179)
.++.+|||||||+|.++..++++.+ ..+|+|+|+++.. .+ .+++++.+|+.+.
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~p-------------~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~ 287 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKNP-------------QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG 287 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHCT-------------TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTT
T ss_pred cCCCeEEEEeCcchHHHHHHHHHCC-------------CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhcc
Confidence 3468999999999999999999864 5799999999841 11 2588899999874
Q ss_pred hhHHHHHhhcCCCCccEEeeCCCCC
Q 030299 106 RTAEVVIRHFDGCKADLVVCDGAPD 130 (179)
Q Consensus 106 ~~~~~l~~~~~~~~~D~VlsD~~~~ 130 (179)
+++++||+|++|.+..
T Consensus 288 ---------~~~~~fD~Ii~nppfh 303 (375)
T 4dcm_A 288 ---------VEPFRFNAVLCNPPFH 303 (375)
T ss_dssp ---------CCTTCEEEEEECCCC-
T ss_pred ---------CCCCCeeEEEECCCcc
Confidence 3456899999997653
No 156
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.49 E-value=4.2e-07 Score=72.51 Aligned_cols=64 Identities=25% Similarity=0.245 Sum_probs=51.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~ 109 (179)
+++.+|||||||+|.++..++++ + ..|+|+|+++.. ...++.++++|+.+.+
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~-~--------------~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~--- 101 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER-G--------------YEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA--- 101 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC---
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC-C--------------CeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcc---
Confidence 56789999999999999999886 2 689999999831 1236899999998854
Q ss_pred HHHhhcCCCCccEEeeCC
Q 030299 110 VVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~ 127 (179)
++ .+||+|++..
T Consensus 102 -----~~-~~fD~v~~~~ 113 (252)
T 1wzn_A 102 -----FK-NEFDAVTMFF 113 (252)
T ss_dssp -----CC-SCEEEEEECS
T ss_pred -----cC-CCccEEEEcC
Confidence 23 5799999854
No 157
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.48 E-value=6.4e-07 Score=76.97 Aligned_cols=72 Identities=15% Similarity=0.131 Sum_probs=56.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--CCCCeeEEeccccchhhHHHHHhhcCC
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--PIEGVIQVQGDITNARTAEVVIRHFDG 117 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~--~~~~v~~i~gDi~~~~~~~~l~~~~~~ 117 (179)
.++.+|||+|||+|+++..++++.+. ...|+|+|+++.. ...++.++++|+.+.. ..
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~------------~~~i~gvDi~~~~~~~a~~~~~~~~D~~~~~---------~~ 96 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGT------------AYRFVGVEIDPKALDLPPWAEGILADFLLWE---------PG 96 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCS------------CSEEEEEESCTTTCCCCTTEEEEESCGGGCC---------CS
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCC------------CCeEEEEECCHHHHHhCCCCcEEeCChhhcC---------cc
Confidence 35679999999999999999998732 4799999999953 2258899999998753 23
Q ss_pred CCccEEeeCCCCCCC
Q 030299 118 CKADLVVCDGAPDVT 132 (179)
Q Consensus 118 ~~~D~VlsD~~~~~~ 132 (179)
.+||+|+++.+....
T Consensus 97 ~~fD~Ii~NPPy~~~ 111 (421)
T 2ih2_A 97 EAFDLILGNPPYGIV 111 (421)
T ss_dssp SCEEEEEECCCCCCB
T ss_pred CCCCEEEECcCccCc
Confidence 589999999665433
No 158
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.48 E-value=1.7e-07 Score=75.74 Aligned_cols=70 Identities=10% Similarity=0.064 Sum_probs=54.2
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------------CCCCCeeEEecc
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------------APIEGVIQVQGD 101 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------------~~~~~v~~i~gD 101 (179)
.+++.+|||||||+|.++..++++.+ ...|+|+|+++. ....|+.++++|
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p-------------~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d 110 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFP-------------DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSN 110 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGST-------------TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECC
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCC-------------CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECc
Confidence 35677999999999999999998865 579999999972 124689999999
Q ss_pred ccc-hhhHHHHHhhcCCCCccEEeeCC
Q 030299 102 ITN-ARTAEVVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 102 i~~-~~~~~~l~~~~~~~~~D~VlsD~ 127 (179)
+.+ .+ ..++++.+|.|++..
T Consensus 111 ~~~~l~------~~~~~~~~D~v~~~~ 131 (235)
T 3ckk_A 111 AMKHLP------NFFYKGQLTKMFFLF 131 (235)
T ss_dssp TTTCHH------HHCCTTCEEEEEEES
T ss_pred HHHhhh------hhCCCcCeeEEEEeC
Confidence 987 32 124567899998754
No 159
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.48 E-value=3.2e-07 Score=76.92 Aligned_cols=71 Identities=14% Similarity=0.108 Sum_probs=52.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------------CCCCeeEEecccc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------PIEGVIQVQGDIT 103 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------------~~~~v~~i~gDi~ 103 (179)
.++.+|||||||+|+++..+++..+ ..+|++||+++.. ..++++++.+|..
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~-------------~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~ 148 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKN-------------VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGV 148 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTT-------------CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSC
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCC-------------CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHH
Confidence 4568999999999999999987643 4789999999941 1357999999998
Q ss_pred chhhHHHHHhhcCCCCccEEeeCCCCC
Q 030299 104 NARTAEVVIRHFDGCKADLVVCDGAPD 130 (179)
Q Consensus 104 ~~~~~~~l~~~~~~~~~D~VlsD~~~~ 130 (179)
+... ..+++||+|++|....
T Consensus 149 ~~l~-------~~~~~fDvIi~D~~~p 168 (294)
T 3adn_A 149 NFVN-------QTSQTFDVIISDCTDP 168 (294)
T ss_dssp C----------CCCCCEEEEEECC---
T ss_pred HHHh-------hcCCCccEEEECCCCc
Confidence 7421 1346899999998643
No 160
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.48 E-value=2.6e-07 Score=72.29 Aligned_cols=67 Identities=16% Similarity=0.195 Sum_probs=53.4
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------C---C-----CCeeEEeccc
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P---I-----EGVIQVQGDI 102 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~--------~---~-----~~v~~i~gDi 102 (179)
++++.+|||+|||+|.++..++++ + ..|+|+|+++.. . . .++.++.+|+
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~ 92 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK-G--------------YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENA 92 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCT
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC-C--------------CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecc
Confidence 578999999999999999999887 3 689999999831 1 1 2478899999
Q ss_pred cchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 103 TNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 103 ~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
.+.+ +++++||+|++...
T Consensus 93 ~~~~--------~~~~~~D~v~~~~~ 110 (235)
T 3sm3_A 93 SSLS--------FHDSSFDFAVMQAF 110 (235)
T ss_dssp TSCC--------SCTTCEEEEEEESC
T ss_pred cccC--------CCCCceeEEEEcch
Confidence 8764 34678999999653
No 161
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.48 E-value=9e-08 Score=76.32 Aligned_cols=66 Identities=12% Similarity=-0.001 Sum_probs=51.9
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------C---CCCeeEEeccccchhhHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P---IEGVIQVQGDITNARTAE 109 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~--------~---~~~v~~i~gDi~~~~~~~ 109 (179)
++.+|||||||+|.++..++++. ...|+|+|+++.. . ..++.++++|+.+.+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--- 141 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--------------FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT--- 141 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--------------CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC---
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--------------CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcC---
Confidence 58899999999999999988764 2689999999831 1 235889999988754
Q ss_pred HHHhhcCCCCccEEeeCCC
Q 030299 110 VVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~ 128 (179)
+.++.||+|+++..
T Consensus 142 -----~~~~~fD~v~~~~~ 155 (241)
T 2ex4_A 142 -----PEPDSYDVIWIQWV 155 (241)
T ss_dssp -----CCSSCEEEEEEESC
T ss_pred -----CCCCCEEEEEEcch
Confidence 34458999999864
No 162
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.47 E-value=2.4e-07 Score=72.95 Aligned_cols=63 Identities=17% Similarity=0.286 Sum_probs=52.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------CCCCCeeEEeccccchhhHHHHHh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------APIEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~------~~~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
.++.+|||+|||+|.++..++++. ..|+|+|+++. +..+++.++++|+.+.+
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---------------~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 96 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---------------GDTAGLELSEDMLTHARKRLPDATLHQGDMRDFR------- 96 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---------------SEEEEEESCHHHHHHHHHHCTTCEEEECCTTTCC-------
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---------------CcEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcc-------
Confidence 678899999999999999999885 48999999983 12467999999998854
Q ss_pred hcCCCCccEEeeC
Q 030299 114 HFDGCKADLVVCD 126 (179)
Q Consensus 114 ~~~~~~~D~VlsD 126 (179)
+ ..+||+|++.
T Consensus 97 -~-~~~~D~v~~~ 107 (239)
T 3bxo_A 97 -L-GRKFSAVVSM 107 (239)
T ss_dssp -C-SSCEEEEEEC
T ss_pred -c-CCCCcEEEEc
Confidence 2 4689999963
No 163
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.47 E-value=2.6e-07 Score=72.90 Aligned_cols=68 Identities=13% Similarity=0.207 Sum_probs=53.4
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCeeEEeccccchhhHH
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---------~~~~v~~i~gDi~~~~~~~ 109 (179)
+.++.+|||+|||+|.++..+++.. ..|+|+|+++.. ...++.++++|+.+...
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~---------------~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~-- 130 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIV---------------DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-- 130 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS---------------SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG--
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHc---------------CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccc--
Confidence 3678899999999999999999873 589999999831 11279999999987321
Q ss_pred HHHhhcCCCCccEEeeCCCC
Q 030299 110 VVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~~ 129 (179)
.+.+||+|+++...
T Consensus 131 ------~~~~fD~v~~~~~~ 144 (231)
T 1vbf_A 131 ------EEKPYDRVVVWATA 144 (231)
T ss_dssp ------GGCCEEEEEESSBB
T ss_pred ------cCCCccEEEECCcH
Confidence 23579999998754
No 164
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.46 E-value=2.6e-07 Score=69.01 Aligned_cols=71 Identities=14% Similarity=0.042 Sum_probs=53.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~ 108 (179)
+++.+|||+|||+|.++..++++. ..|+|+|+++.. .. +++++++|+.+....
T Consensus 40 ~~~~~vLD~GcG~G~~~~~l~~~~---------------~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~ 103 (171)
T 1ws6_A 40 PRRGRFLDPFAGSGAVGLEAASEG---------------WEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPE 103 (171)
T ss_dssp TTCCEEEEETCSSCHHHHHHHHTT---------------CEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHH
T ss_pred cCCCeEEEeCCCcCHHHHHHHHCC---------------CeEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHh
Confidence 478899999999999999998873 349999999831 12 789999999874211
Q ss_pred HHHHhhcCCCCccEEeeCCCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGAPD 130 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~~~ 130 (179)
+.. .+.+||+|+++.+..
T Consensus 104 --~~~--~~~~~D~i~~~~~~~ 121 (171)
T 1ws6_A 104 --AKA--QGERFTVAFMAPPYA 121 (171)
T ss_dssp --HHH--TTCCEEEEEECCCTT
T ss_pred --hhc--cCCceEEEEECCCCc
Confidence 111 134799999997643
No 165
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.46 E-value=5.8e-07 Score=76.45 Aligned_cols=66 Identities=17% Similarity=0.273 Sum_probs=53.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CC-CCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~-~~v~~i~gDi~~~~~~ 108 (179)
.++.+|||||||+|.++..++++ + ..+|+|+|++++. .. .+++++++|+.+.+
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~-g-------------~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-- 112 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQA-G-------------ARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVS-- 112 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-T-------------CSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC--
T ss_pred CCcCEEEEcCCCccHHHHHHHhC-C-------------CCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCC--
Confidence 57889999999999999999885 3 3699999999852 12 57999999998864
Q ss_pred HHHHhhcCCCCccEEeeCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~ 128 (179)
++ ++||+|+++..
T Consensus 113 ------~~-~~~D~Ivs~~~ 125 (348)
T 2y1w_A 113 ------LP-EQVDIIISEPM 125 (348)
T ss_dssp ------CS-SCEEEEEECCC
T ss_pred ------CC-CceeEEEEeCc
Confidence 23 57999999865
No 166
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.46 E-value=1.2e-07 Score=79.27 Aligned_cols=65 Identities=14% Similarity=0.143 Sum_probs=49.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------APIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~~~~~v~~i~gDi~~~~~~ 108 (179)
.++.+|||+|||+|.+|..++++ ...|+|+|+++. ...++++++++|+.+.+
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~---------------~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~-- 103 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPL---------------AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV-- 103 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTT---------------SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC--
T ss_pred CCcCEEEEEcCcCcHHHHHHHhc---------------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCC--
Confidence 67889999999999999999876 268999999983 12468999999998753
Q ss_pred HHHHhhcCCCCccEEeeCCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~~ 129 (179)
...||+|++|.+.
T Consensus 104 --------~~~~D~Vv~n~py 116 (299)
T 2h1r_A 104 --------FPKFDVCTANIPY 116 (299)
T ss_dssp --------CCCCSEEEEECCG
T ss_pred --------cccCCEEEEcCCc
Confidence 2379999998764
No 167
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.45 E-value=1.7e-07 Score=72.50 Aligned_cols=68 Identities=16% Similarity=0.024 Sum_probs=51.2
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhH
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~ 108 (179)
+.++.+|||+|||+|.++..++... ...|+|+|+++.. ...++.++++|+.+.+
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~--------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-- 84 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVED--------------GYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLP-- 84 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHT--------------TCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCC--
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhC--------------CCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCC--
Confidence 4678899999999999855444443 3699999999831 1257889999998854
Q ss_pred HHHHhhcCCCCccEEeeCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~ 128 (179)
++++.||+|++...
T Consensus 85 ------~~~~~fD~v~~~~~ 98 (209)
T 2p8j_A 85 ------FKDESMSFVYSYGT 98 (209)
T ss_dssp ------SCTTCEEEEEECSC
T ss_pred ------CCCCceeEEEEcCh
Confidence 34568999998754
No 168
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.45 E-value=7.4e-07 Score=75.84 Aligned_cols=112 Identities=8% Similarity=0.007 Sum_probs=74.0
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------C---CCCeeEEeccccchhhHHHH
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P---IEGVIQVQGDITNARTAEVV 111 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~--------~---~~~v~~i~gDi~~~~~~~~l 111 (179)
.+|||||||.|+.+.+++++.+ ..+|++||+++.. + .++++++.+|..+..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p-------------~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l----- 152 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYP-------------QSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVA----- 152 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHST-------------TCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHH-----
T ss_pred CEEEEEECCcCHHHHHHHHHCC-------------CcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHH-----
Confidence 3999999999999999999765 4699999999831 1 357999999988742
Q ss_pred HhhcCCCCccEEeeCCCCCCCCCCcccHHHHHHHHHHHHHH---H-----------HHHHHHHHHHHhhceEEEee
Q 030299 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAVSIQ---F-----------FIYELVFCLRQLLQYVILDG 173 (179)
Q Consensus 112 ~~~~~~~~~D~VlsD~~~~~~g~~~~d~~~q~~L~~~AL~~---~-----------~~~~~~~~~~~~f~~v~~~~ 173 (179)
..+.+++||+|++|......-........-++.+...|+- + ++-.++-.|++.|..|.+..
T Consensus 153 -~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~~v~~~~ 227 (317)
T 3gjy_A 153 -ESFTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFEHVAVIA 227 (317)
T ss_dssp -HTCCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCSEEEEEE
T ss_pred -hhccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCCceEEEE
Confidence 1234568999999975332111111112223444444430 0 12355667899999998753
No 169
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.45 E-value=2.4e-07 Score=72.33 Aligned_cols=60 Identities=12% Similarity=0.080 Sum_probs=49.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCeeEEeccccchhhHHHHHhhcCCCC
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCK 119 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v~~i~gDi~~~~~~~~l~~~~~~~~ 119 (179)
.++.+|||||||+|.++..+ . ..|+|+|+++. ++.++++|+.+.+ ++++.
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l----~--------------~~v~~~D~s~~----~~~~~~~d~~~~~--------~~~~~ 115 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI----R--------------NPVHCFDLASL----DPRVTVCDMAQVP--------LEDES 115 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC----C--------------SCEEEEESSCS----STTEEESCTTSCS--------CCTTC
T ss_pred CCCCeEEEECCcCCHHHHHh----h--------------ccEEEEeCCCC----CceEEEeccccCC--------CCCCC
Confidence 67889999999999998876 2 47999999987 6778899998854 34568
Q ss_pred ccEEeeCCCC
Q 030299 120 ADLVVCDGAP 129 (179)
Q Consensus 120 ~D~VlsD~~~ 129 (179)
||+|++....
T Consensus 116 fD~v~~~~~l 125 (215)
T 2zfu_A 116 VDVAVFCLSL 125 (215)
T ss_dssp EEEEEEESCC
T ss_pred EeEEEEehhc
Confidence 9999997654
No 170
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.45 E-value=2.2e-07 Score=84.22 Aligned_cols=68 Identities=26% Similarity=0.227 Sum_probs=52.8
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCCCCeeEEeccccchhh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------APIEGVIQVQGDITNART 107 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~~~~~v~~i~gDi~~~~~ 107 (179)
+.++.+|||||||.|.+|+.++++ +..|+|||+++. .+..++.+.++|+.+..
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~---------------ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~- 127 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK---------------GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVI- 127 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT---------------TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHH-
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC---------------CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHh-
Confidence 356679999999999999999986 378999999983 12246888899988752
Q ss_pred HHHHHhhcCCCCccEEeeCC
Q 030299 108 AEVVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~ 127 (179)
..+.++.||+|+|-.
T Consensus 128 -----~~~~~~~fD~v~~~e 142 (569)
T 4azs_A 128 -----AALEEGEFDLAIGLS 142 (569)
T ss_dssp -----HHCCTTSCSEEEEES
T ss_pred -----hhccCCCccEEEECc
Confidence 124456899999854
No 171
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.45 E-value=1.5e-07 Score=72.66 Aligned_cols=64 Identities=13% Similarity=0.059 Sum_probs=50.9
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------C----CCCeeEEeccccchhhH
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P----IEGVIQVQGDITNARTA 108 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~----~~~v~~i~gDi~~~~~~ 108 (179)
++++ +|||+|||+|.++..++++ + ..|+|+|+++.. . ..++.++++|+.+.+
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-- 89 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL-G--------------YEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFD-- 89 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT-T--------------CEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBS--
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC-C--------------CeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcC--
Confidence 4677 9999999999999998875 2 689999999831 0 127889999998864
Q ss_pred HHHHhhcCCCCccEEeeC
Q 030299 109 EVVIRHFDGCKADLVVCD 126 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD 126 (179)
++++.||+|++.
T Consensus 90 ------~~~~~fD~v~~~ 101 (202)
T 2kw5_A 90 ------IVADAWEGIVSI 101 (202)
T ss_dssp ------CCTTTCSEEEEE
T ss_pred ------CCcCCccEEEEE
Confidence 345689999984
No 172
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.43 E-value=4.6e-07 Score=78.58 Aligned_cols=72 Identities=19% Similarity=0.226 Sum_probs=55.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~ 109 (179)
.++.+|||+|||+|.++..++++ + ..|+|+|+++.. ...+++++.+|+.+..
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~-g--------------~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~--- 293 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM-G--------------AEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEAL--- 293 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT-T--------------CEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTS---
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc-C--------------CEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhcc---
Confidence 36789999999999999999986 2 699999999841 1124889999998864
Q ss_pred HHHhhcCCCCccEEeeCCCCCCCCC
Q 030299 110 VVIRHFDGCKADLVVCDGAPDVTGL 134 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~~~~~g~ 134 (179)
..+.+||+|+++.+....+.
T Consensus 294 -----~~~~~fD~Ii~npp~~~~~~ 313 (381)
T 3dmg_A 294 -----TEEARFDIIVTNPPFHVGGA 313 (381)
T ss_dssp -----CTTCCEEEEEECCCCCTTCS
T ss_pred -----ccCCCeEEEEECCchhhccc
Confidence 22468999999977654333
No 173
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.43 E-value=4.4e-07 Score=75.36 Aligned_cols=66 Identities=20% Similarity=0.267 Sum_probs=53.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------C--CC-CCeeEEeccccchhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------A--PI-EGVIQVQGDITNART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~--~~-~~v~~i~gDi~~~~~ 107 (179)
.++.+|||+|||+|.+|..++++. ..|+|+|+++. . +. ++++++++|+.+.+
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~---------------~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~- 90 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKA---------------KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTD- 90 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHS---------------SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSC-
T ss_pred CCCCEEEEEcCcccHHHHHHHhhC---------------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceeccc-
Confidence 678899999999999999999873 58999999982 1 11 47999999998753
Q ss_pred HHHHHhhcCCCCccEEeeCCCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGAPD 130 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~~~ 130 (179)
+ ..||+|+++.+.+
T Consensus 91 -------~--~~fD~vv~nlpy~ 104 (285)
T 1zq9_A 91 -------L--PFFDTCVANLPYQ 104 (285)
T ss_dssp -------C--CCCSEEEEECCGG
T ss_pred -------c--hhhcEEEEecCcc
Confidence 2 2699999987643
No 174
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.42 E-value=8.6e-08 Score=72.15 Aligned_cols=65 Identities=15% Similarity=0.205 Sum_probs=51.8
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCeeEEeccccchhhHHHHH
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVI 112 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~~~v~~i~gDi~~~~~~~~l~ 112 (179)
+.++.+|||+|||+|.++..++++. ..|+|+|+++.. ..++++++++| .+
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~------ 70 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFA---------------TKLYCIDINVIALKEVKEKFDSVITLSDP---KE------ 70 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTE---------------EEEEEECSCHHHHHHHHHHCTTSEEESSG---GG------
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhc---------------CeEEEEeCCHHHHHHHHHhCCCcEEEeCC---CC------
Confidence 3678899999999999999998864 389999999831 25689999999 21
Q ss_pred hhcCCCCccEEeeCCCC
Q 030299 113 RHFDGCKADLVVCDGAP 129 (179)
Q Consensus 113 ~~~~~~~~D~VlsD~~~ 129 (179)
+++++||+|++....
T Consensus 71 --~~~~~~D~v~~~~~l 85 (170)
T 3i9f_A 71 --IPDNSVDFILFANSF 85 (170)
T ss_dssp --SCTTCEEEEEEESCS
T ss_pred --CCCCceEEEEEccch
Confidence 356789999987643
No 175
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.42 E-value=1.1e-07 Score=78.74 Aligned_cols=69 Identities=17% Similarity=0.049 Sum_probs=53.3
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~-~v~~i~gDi~~~~ 106 (179)
++++.+|||||||+|.++..++.... +...|+|+|+++.. ... +++++++|+.+.+
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 183 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSAC------------PGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD 183 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTC------------TTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcC------------CCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC
Confidence 47899999999999999999863322 25799999999831 122 3899999999864
Q ss_pred hHHHHHhhcCCCCccEEeeCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
++ +.||+|++...
T Consensus 184 --------~~-~~fD~v~~~~~ 196 (305)
T 3ocj_A 184 --------TR-EGYDLLTSNGL 196 (305)
T ss_dssp --------CC-SCEEEEECCSS
T ss_pred --------cc-CCeEEEEECCh
Confidence 34 68999998653
No 176
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.42 E-value=9.5e-07 Score=78.04 Aligned_cols=77 Identities=10% Similarity=0.099 Sum_probs=57.1
Q ss_pred HHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------C------------C--
Q 030299 32 IDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------A------------P-- 91 (179)
Q Consensus 32 id~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~------~------------~-- 91 (179)
+.+..+ ++++++|||||||+|..+..++...+ ..+|+|||+++. + .
T Consensus 165 il~~l~-l~~gd~VLDLGCGtG~l~l~lA~~~g-------------~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~ 230 (438)
T 3uwp_A 165 MIDEIK-MTDDDLFVDLGSGVGQVVLQVAAATN-------------CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK 230 (438)
T ss_dssp HHHHHC-CCTTCEEEEESCTTSHHHHHHHHHCC-------------CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC
T ss_pred HHHhcC-CCCCCEEEEeCCCCCHHHHHHHHHCC-------------CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 333443 47899999999999999999988764 357999999972 0 1
Q ss_pred CCCeeEEeccccchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 92 IEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 92 ~~~v~~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
..+|++++||+.+.+.... + ..+|+|+++..
T Consensus 231 ~~rVefi~GD~~~lp~~d~----~--~~aDVVf~Nn~ 261 (438)
T 3uwp_A 231 HAEYTLERGDFLSEEWRER----I--ANTSVIFVNNF 261 (438)
T ss_dssp CCEEEEEECCTTSHHHHHH----H--HTCSEEEECCT
T ss_pred CCCeEEEECcccCCccccc----c--CCccEEEEccc
Confidence 2579999999999764211 1 25999998753
No 177
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.42 E-value=5.4e-07 Score=74.82 Aligned_cols=64 Identities=16% Similarity=0.300 Sum_probs=51.8
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCC-eeEEeccccchhhH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEG-VIQVQGDITNARTA 108 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~-v~~i~gDi~~~~~~ 108 (179)
++.+|||+|||+|.++..++.. + ...|+|+|+++.. .+.+ ++++++|+++..
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~-------------~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~-- 186 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-S-------------DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF-- 186 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-S-------------SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG--
T ss_pred CCCEEEEEeCchhHHHHHHHHC-C-------------CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc--
Confidence 6679999999999999999998 5 5899999999831 2343 999999998842
Q ss_pred HHHHhhcCCCCc---cEEeeCCC
Q 030299 109 EVVIRHFDGCKA---DLVVCDGA 128 (179)
Q Consensus 109 ~~l~~~~~~~~~---D~VlsD~~ 128 (179)
+ .+| |+|++|.+
T Consensus 187 -------~-~~f~~~D~IvsnPP 201 (284)
T 1nv8_A 187 -------K-EKFASIEMILSNPP 201 (284)
T ss_dssp -------G-GGTTTCCEEEECCC
T ss_pred -------c-cccCCCCEEEEcCC
Confidence 1 257 99999954
No 178
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.41 E-value=1.9e-07 Score=74.03 Aligned_cols=76 Identities=16% Similarity=0.160 Sum_probs=55.7
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------C-----CCCeeEEeccc
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P-----IEGVIQVQGDI 102 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~-----~~~v~~i~gDi 102 (179)
++++.+|||+|||+|.++..+++..+.. + ....+.|+++|+++.. . ..++.++.+|+
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~----~---~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 154 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAK----G---VDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG 154 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHS----C---CCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccc----c---CCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCc
Confidence 5788999999999999999999876410 0 0002589999999831 1 35899999999
Q ss_pred cchhhHHHHHhhcCCCCccEEeeCCCC
Q 030299 103 TNARTAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 103 ~~~~~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
.+... ...+||+|+++...
T Consensus 155 ~~~~~--------~~~~fD~I~~~~~~ 173 (227)
T 1r18_A 155 RKGYP--------PNAPYNAIHVGAAA 173 (227)
T ss_dssp GGCCG--------GGCSEEEEEECSCB
T ss_pred ccCCC--------cCCCccEEEECCch
Confidence 87321 12579999998764
No 179
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.41 E-value=3.1e-07 Score=75.51 Aligned_cols=70 Identities=9% Similarity=0.020 Sum_probs=53.9
Q ss_pred HhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CeeEEeccc
Q 030299 35 EFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDI 102 (179)
Q Consensus 35 ~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~-~v~~i~gDi 102 (179)
...++++|.+|||||||+|..+..++...+ ...|+|+|+++.. .+. .+++.++|.
T Consensus 15 i~~~v~~g~~VlDIGtGsG~l~i~la~~~~-------------~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~ 81 (244)
T 3gnl_A 15 VASYITKNERIADIGSDHAYLPCFAVKNQT-------------ASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNG 81 (244)
T ss_dssp HHTTCCSSEEEEEETCSTTHHHHHHHHTTS-------------EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSG
T ss_pred HHHhCCCCCEEEEECCccHHHHHHHHHhCC-------------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecch
Confidence 345678999999999999999999998743 4689999999831 233 488999999
Q ss_pred cchhhHHHHHhhcCCCCccEEee
Q 030299 103 TNARTAEVVIRHFDGCKADLVVC 125 (179)
Q Consensus 103 ~~~~~~~~l~~~~~~~~~D~Vls 125 (179)
.+... ++.+||+|+.
T Consensus 82 l~~~~--------~~~~~D~Ivi 96 (244)
T 3gnl_A 82 LAVIE--------KKDAIDTIVI 96 (244)
T ss_dssp GGGCC--------GGGCCCEEEE
T ss_pred hhccC--------ccccccEEEE
Confidence 88531 1235999875
No 180
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.41 E-value=2.1e-07 Score=73.81 Aligned_cols=65 Identities=17% Similarity=0.052 Sum_probs=50.3
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------C---CCCeeEEeccccchhhH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P---IEGVIQVQGDITNARTA 108 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---------~---~~~v~~i~gDi~~~~~~ 108 (179)
++.+|||+|||+|.++..++.. ...|+|+|+++.. . ..+++++++|+.+..
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~---------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 128 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP---------------ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-- 128 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT---------------TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC--
T ss_pred CCCCEEEeCCCCCHHHHHHHhC---------------CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC--
Confidence 3459999999999999988653 4689999999831 1 235999999999854
Q ss_pred HHHHhhcCCCCccEEeeCCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~~ 129 (179)
++..||+|++....
T Consensus 129 -------~~~~fD~v~~~~~l 142 (235)
T 3lcc_A 129 -------PTELFDLIFDYVFF 142 (235)
T ss_dssp -------CSSCEEEEEEESST
T ss_pred -------CCCCeeEEEEChhh
Confidence 34589999986543
No 181
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.41 E-value=2.6e-07 Score=75.38 Aligned_cols=70 Identities=11% Similarity=0.019 Sum_probs=54.1
Q ss_pred HhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CeeEEeccc
Q 030299 35 EFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDI 102 (179)
Q Consensus 35 ~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~-~v~~i~gDi 102 (179)
..+++++|.+|+|+|||+|..+..++...+ ..+|+|+|+++.. .+. .+++.++|.
T Consensus 15 i~~~v~~g~~VlDIGtGsG~l~i~la~~~~-------------~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~ 81 (230)
T 3lec_A 15 VANYVPKGARLLDVGSDHAYLPIFLLQMGY-------------CDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANG 81 (230)
T ss_dssp HHTTSCTTEEEEEETCSTTHHHHHHHHTTC-------------EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSG
T ss_pred HHHhCCCCCEEEEECCchHHHHHHHHHhCC-------------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECch
Confidence 345678999999999999999999998743 4689999999831 233 599999999
Q ss_pred cchhhHHHHHhhcCCCCccEEee
Q 030299 103 TNARTAEVVIRHFDGCKADLVVC 125 (179)
Q Consensus 103 ~~~~~~~~l~~~~~~~~~D~Vls 125 (179)
.+... ++.+||+|+.
T Consensus 82 l~~~~--------~~~~~D~Ivi 96 (230)
T 3lec_A 82 LSAFE--------EADNIDTITI 96 (230)
T ss_dssp GGGCC--------GGGCCCEEEE
T ss_pred hhccc--------cccccCEEEE
Confidence 88531 2236998764
No 182
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.41 E-value=2.6e-07 Score=79.50 Aligned_cols=70 Identities=17% Similarity=0.108 Sum_probs=56.6
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~ 106 (179)
..++.+|||+|||+|.++..++.... .+.|+|+|+++.. .+ .+++++++|+.+.+
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~-------------~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~ 281 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRY-------------SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLS 281 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTC-------------CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGG
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCC-------------CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCC
Confidence 47889999999999999999998753 3589999999831 22 46899999999865
Q ss_pred hHHHHHhhcCCCCccEEeeCCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
++...||+|++|.+.
T Consensus 282 --------~~~~~fD~Ii~npPy 296 (373)
T 3tm4_A 282 --------QYVDSVDFAISNLPY 296 (373)
T ss_dssp --------GTCSCEEEEEEECCC
T ss_pred --------cccCCcCEEEECCCC
Confidence 234689999998764
No 183
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.40 E-value=9.4e-07 Score=76.98 Aligned_cols=69 Identities=22% Similarity=0.259 Sum_probs=50.6
Q ss_pred CCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchh
Q 030299 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNAR 106 (179)
Q Consensus 38 ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~ 106 (179)
++++|.+|||+|||+|+++..++.. + ..|+|+|+++.. .+. ..+.++|+++..
T Consensus 211 ~~~~g~~VLDlg~GtG~~sl~~a~~-g--------------a~V~avDis~~al~~a~~n~~~ng~~-~~~~~~D~~~~l 274 (393)
T 4dmg_A 211 MVRPGERVLDVYSYVGGFALRAARK-G--------------AYALAVDKDLEALGVLDQAALRLGLR-VDIRHGEALPTL 274 (393)
T ss_dssp TCCTTCEEEEESCTTTHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHHHTCC-CEEEESCHHHHH
T ss_pred HhcCCCeEEEcccchhHHHHHHHHc-C--------------CeEEEEECCHHHHHHHHHHHHHhCCC-CcEEEccHHHHH
Confidence 3467999999999999999999886 3 459999999841 122 246688887742
Q ss_pred hHHHHHhhcCCCCccEEeeCCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
..+.+ .||+|++|.+.
T Consensus 275 ------~~~~~-~fD~Ii~dpP~ 290 (393)
T 4dmg_A 275 ------RGLEG-PFHHVLLDPPT 290 (393)
T ss_dssp ------HTCCC-CEEEEEECCCC
T ss_pred ------HHhcC-CCCEEEECCCc
Confidence 12334 49999999654
No 184
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.39 E-value=4.1e-07 Score=68.77 Aligned_cols=66 Identities=24% Similarity=0.320 Sum_probs=52.0
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~ 106 (179)
+.++.+|||+|||+|.++..+++.. ..|+|+|+++.. .. +++.++++|+.+.
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~---------------~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~- 94 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV---------------RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA- 94 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS---------------SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH-
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc---------------CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh-
Confidence 4788899999999999999998763 589999999831 22 5788999998762
Q ss_pred hHHHHHhhcCC-CCccEEeeCCC
Q 030299 107 TAEVVIRHFDG-CKADLVVCDGA 128 (179)
Q Consensus 107 ~~~~l~~~~~~-~~~D~VlsD~~ 128 (179)
++. ..||+|++++.
T Consensus 95 --------~~~~~~~D~v~~~~~ 109 (192)
T 1l3i_A 95 --------LCKIPDIDIAVVGGS 109 (192)
T ss_dssp --------HTTSCCEEEEEESCC
T ss_pred --------cccCCCCCEEEECCc
Confidence 122 47999999865
No 185
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.39 E-value=1.2e-06 Score=74.74 Aligned_cols=75 Identities=23% Similarity=0.375 Sum_probs=56.5
Q ss_pred HhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC----CCCCCeeEEeccccch
Q 030299 30 LQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----APIEGVIQVQGDITNA 105 (179)
Q Consensus 30 ~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~----~~~~~v~~i~gDi~~~ 105 (179)
..+.+.+.-+.++.+|||||||+|.++..++++.+ ...++++|+..+ ...++++++.+|+++
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~-------------~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~- 263 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYP-------------LIKGINFDLPQVIENAPPLSGIEHVGGDMFA- 263 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEECHHHHTTCCCCTTEEEEECCTTT-
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCC-------------CCeEEEeChHHHHHhhhhcCCCEEEeCCccc-
Confidence 34445554356788999999999999999999875 578999998322 234689999999987
Q ss_pred hhHHHHHhhcCCCCccEEeeCCC
Q 030299 106 RTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 106 ~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
+ ++. +|+|++...
T Consensus 264 ~--------~~~--~D~v~~~~~ 276 (372)
T 1fp1_D 264 S--------VPQ--GDAMILKAV 276 (372)
T ss_dssp C--------CCC--EEEEEEESS
T ss_pred C--------CCC--CCEEEEecc
Confidence 3 232 899988543
No 186
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.39 E-value=6.8e-07 Score=72.52 Aligned_cols=66 Identities=11% Similarity=0.193 Sum_probs=51.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CCCCCeeEEeccccchhhHHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------APIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~~~~~v~~i~gDi~~~~~~~~ 110 (179)
.++.+|||+|||+|.+|..++++. .+|+|+|+++. ...++++++++|+.+.+
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~---------------~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~---- 89 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRC---------------NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFK---- 89 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS---------------SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCC----
T ss_pred CCCCEEEEEeCCchHHHHHHHHcC---------------CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCC----
Confidence 578899999999999999999873 68999999982 22368999999998864
Q ss_pred HHhhcC-CCCccEEeeCCCC
Q 030299 111 VIRHFD-GCKADLVVCDGAP 129 (179)
Q Consensus 111 l~~~~~-~~~~D~VlsD~~~ 129 (179)
++ +..+ .|+++.+.
T Consensus 90 ----~~~~~~~-~vv~nlPy 104 (244)
T 1qam_A 90 ----FPKNQSY-KIFGNIPY 104 (244)
T ss_dssp ----CCSSCCC-EEEEECCG
T ss_pred ----cccCCCe-EEEEeCCc
Confidence 22 2344 67887654
No 187
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.38 E-value=5e-07 Score=73.39 Aligned_cols=69 Identities=6% Similarity=-0.022 Sum_probs=53.5
Q ss_pred hCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CeeEEecccc
Q 030299 36 FNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDIT 103 (179)
Q Consensus 36 ~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~-~v~~i~gDi~ 103 (179)
..++++|.+|+|+|||+|..+..++...+ ..+|+|+|+++.. .+. ++++..+|..
T Consensus 10 ~~~v~~g~~VlDIGtGsG~l~i~la~~~~-------------~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l 76 (225)
T 3kr9_A 10 ASFVSQGAILLDVGSDHAYLPIELVERGQ-------------IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGL 76 (225)
T ss_dssp HTTSCTTEEEEEETCSTTHHHHHHHHTTS-------------EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGG
T ss_pred HHhCCCCCEEEEeCCCcHHHHHHHHHhCC-------------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchh
Confidence 45678999999999999999999998754 4789999999831 233 5899999997
Q ss_pred chhhHHHHHhhcCCC-CccEEeeC
Q 030299 104 NARTAEVVIRHFDGC-KADLVVCD 126 (179)
Q Consensus 104 ~~~~~~~l~~~~~~~-~~D~VlsD 126 (179)
+.- +.. +||+|+.-
T Consensus 77 ~~l---------~~~~~~D~Ivia 91 (225)
T 3kr9_A 77 AAF---------EETDQVSVITIA 91 (225)
T ss_dssp GGC---------CGGGCCCEEEEE
T ss_pred hhc---------ccCcCCCEEEEc
Confidence 642 222 69988753
No 188
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.38 E-value=7.4e-07 Score=74.10 Aligned_cols=69 Identities=14% Similarity=-0.012 Sum_probs=54.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------CCCCeeEEeccccchhhHHHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEGVIQVQGDITNARTAEVV 111 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~--------~~~~v~~i~gDi~~~~~~~~l 111 (179)
.++ +|||||||+|..|..++++. .+|+|+|+++.. +..+++++++|+.+.+..
T Consensus 46 ~~~-~VLEIG~G~G~lt~~L~~~~---------------~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~--- 106 (271)
T 3fut_A 46 FTG-PVFEVGPGLGALTRALLEAG---------------AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWE--- 106 (271)
T ss_dssp CCS-CEEEECCTTSHHHHHHHHTT---------------CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGG---
T ss_pred CCC-eEEEEeCchHHHHHHHHHcC---------------CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChh---
Confidence 677 99999999999999999873 589999999831 225799999999886531
Q ss_pred HhhcCCCCccEEeeCCCCCC
Q 030299 112 IRHFDGCKADLVVCDGAPDV 131 (179)
Q Consensus 112 ~~~~~~~~~D~VlsD~~~~~ 131 (179)
....+|.|+++.+-+.
T Consensus 107 ----~~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 107 ----EVPQGSLLVANLPYHI 122 (271)
T ss_dssp ----GSCTTEEEEEEECSSC
T ss_pred ----hccCccEEEecCcccc
Confidence 0125899999986544
No 189
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.38 E-value=2.6e-07 Score=71.78 Aligned_cols=65 Identities=17% Similarity=0.173 Sum_probs=51.6
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCeeEEeccccchhhHHHHH
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVI 112 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~~~v~~i~gDi~~~~~~~~l~ 112 (179)
+.++.+|||+|||+|.++..+ + ...|+|+|+++.. ..+++.++++|+.+.+
T Consensus 34 ~~~~~~vLdiG~G~G~~~~~l----~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~------ 90 (211)
T 2gs9_A 34 LPPGESLLEVGAGTGYWLRRL----P-------------YPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALP------ 90 (211)
T ss_dssp CCCCSEEEEETCTTCHHHHHC----C-------------CSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCC------
T ss_pred cCCCCeEEEECCCCCHhHHhC----C-------------CCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCC------
Confidence 458889999999999999887 3 2389999999831 2368899999998754
Q ss_pred hhcCCCCccEEeeCCC
Q 030299 113 RHFDGCKADLVVCDGA 128 (179)
Q Consensus 113 ~~~~~~~~D~VlsD~~ 128 (179)
+++++||+|++...
T Consensus 91 --~~~~~fD~v~~~~~ 104 (211)
T 2gs9_A 91 --FPGESFDVVLLFTT 104 (211)
T ss_dssp --SCSSCEEEEEEESC
T ss_pred --CCCCcEEEEEEcCh
Confidence 35568999998754
No 190
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.38 E-value=5.6e-07 Score=71.73 Aligned_cols=69 Identities=13% Similarity=0.202 Sum_probs=53.1
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCCCCeeEEeccccchhh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------APIEGVIQVQGDITNART 107 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~~~~~v~~i~gDi~~~~~ 107 (179)
+.++.+|||+|||+|.++..+++..+ ..|+++|+++. ....++.++.+|+.....
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~--------------~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 154 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVK--------------TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFP 154 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHC--------------SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhC--------------CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCC
Confidence 36788999999999999999999863 58999999983 124578999999833211
Q ss_pred HHHHHhhcCCCCccEEeeCCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
...+||+|+++...
T Consensus 155 --------~~~~fD~Ii~~~~~ 168 (235)
T 1jg1_A 155 --------PKAPYDVIIVTAGA 168 (235)
T ss_dssp --------GGCCEEEEEECSBB
T ss_pred --------CCCCccEEEECCcH
Confidence 12359999998754
No 191
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.38 E-value=8.9e-07 Score=70.30 Aligned_cols=66 Identities=17% Similarity=0.112 Sum_probs=53.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~~ 107 (179)
.++.+|||+|||+|.++..++++ + .+|+++|+++.. .+ ++++++.+|+.+..
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~-~--------------~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 153 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV-A--------------GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE- 153 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-S--------------SEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC-
T ss_pred CCCCEEEEeCCCccHHHHHHHHh-C--------------CEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc-
Confidence 68899999999999999999988 4 699999999831 22 57889999998742
Q ss_pred HHHHHhhcCCCCccEEeeCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~ 128 (179)
+++.+||+|+++..
T Consensus 154 -------~~~~~~D~v~~~~~ 167 (248)
T 2yvl_A 154 -------VPEGIFHAAFVDVR 167 (248)
T ss_dssp -------CCTTCBSEEEECSS
T ss_pred -------cCCCcccEEEECCc
Confidence 13468999999753
No 192
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.38 E-value=2.8e-07 Score=74.47 Aligned_cols=69 Identities=14% Similarity=0.183 Sum_probs=53.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCeeEEeccccchhhHHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---------~~~~v~~i~gDi~~~~~~~~ 110 (179)
.++.+|||+|||+|.++..++++. ..|+|+|+++.. ..++++++++|+.+.+
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~---------------~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~---- 88 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKIS---------------KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQ---- 88 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHS---------------SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTT----
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC---------------CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcC----
Confidence 678899999999999999999873 689999999831 1247899999998864
Q ss_pred HHhhcC-CCCccEEeeCCCCCCC
Q 030299 111 VIRHFD-GCKADLVVCDGAPDVT 132 (179)
Q Consensus 111 l~~~~~-~~~~D~VlsD~~~~~~ 132 (179)
++ +.+| .|+++.+...+
T Consensus 89 ----~~~~~~f-~vv~n~Py~~~ 106 (245)
T 1yub_A 89 ----FPNKQRY-KIVGNIPYHLS 106 (245)
T ss_dssp ----CCCSSEE-EEEEECCSSSC
T ss_pred ----cccCCCc-EEEEeCCcccc
Confidence 23 2468 78888765443
No 193
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.37 E-value=3.8e-07 Score=72.38 Aligned_cols=72 Identities=17% Similarity=0.105 Sum_probs=55.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~~ 107 (179)
.++.+|||+|||+|.++..+++..+ .+.|+++|+++.. .. .++.++++|+.+...
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 119 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALP-------------EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGE 119 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCT-------------TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHH
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCC-------------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHH
Confidence 5788999999999999999999875 4799999999831 22 369999999987421
Q ss_pred HHHHHhhcCCCCccEEeeCCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
. ...+++||+|++|...
T Consensus 120 ~-----~~~~~~fD~I~~~~~~ 136 (233)
T 2gpy_A 120 K-----LELYPLFDVLFIDAAK 136 (233)
T ss_dssp H-----HTTSCCEEEEEEEGGG
T ss_pred h-----cccCCCccEEEECCCH
Confidence 0 0113589999998753
No 194
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.37 E-value=9e-07 Score=76.55 Aligned_cols=72 Identities=15% Similarity=0.131 Sum_probs=54.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC--CeeEEeccccchh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE--GVIQVQGDITNAR 106 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~--~v~~i~gDi~~~~ 106 (179)
.++.+|||+|||+|+++..++.+. ...|+|+|+++.. .+. +++++++|+.+..
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g--------------a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l 276 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG--------------AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYF 276 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT--------------BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHH
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC--------------CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHH
Confidence 678899999999999999998752 2589999999941 234 7999999998742
Q ss_pred hHHHHHhhcCCCCccEEeeCCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
. .+.. .+.+||+|++|.+.
T Consensus 277 ~--~~~~--~~~~fD~Ii~DPP~ 295 (385)
T 2b78_A 277 K--YARR--HHLTYDIIIIDPPS 295 (385)
T ss_dssp H--HHHH--TTCCEEEEEECCCC
T ss_pred H--HHHH--hCCCccEEEECCCC
Confidence 1 1111 23589999999654
No 195
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.37 E-value=7.1e-07 Score=72.57 Aligned_cols=65 Identities=18% Similarity=0.242 Sum_probs=50.7
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~ 107 (179)
+.++.+|||+|||+|.++..+++. + ..|+|+|+++.. ... +.++++|+.+.
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~-g--------------~~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~-- 179 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL-G--------------GKALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAA-- 179 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-T--------------CEEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHH--
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh-C--------------CeEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhc--
Confidence 578899999999999999998774 3 499999999842 122 78888888763
Q ss_pred HHHHHhhcCCCCccEEeeCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~ 128 (179)
++..+||+|+++..
T Consensus 180 -------~~~~~fD~Vv~n~~ 193 (254)
T 2nxc_A 180 -------LPFGPFDLLVANLY 193 (254)
T ss_dssp -------GGGCCEEEEEEECC
T ss_pred -------CcCCCCCEEEECCc
Confidence 22358999999753
No 196
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.37 E-value=4.6e-07 Score=71.41 Aligned_cols=75 Identities=13% Similarity=0.073 Sum_probs=55.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~~ 107 (179)
.++.+|||+|||+|.++..+++.++. .++|+++|+++.. .. .+++++++|+.+..
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~------------~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~- 134 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPA------------DGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETL- 134 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCT------------TCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHH-
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCC------------CCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHH-
Confidence 56789999999999999999987652 5799999999831 22 47899999987642
Q ss_pred HHHHHhhcCCCCccEEeeCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~ 128 (179)
..+...-...+||+|++|..
T Consensus 135 -~~~~~~~~~~~~D~v~~d~~ 154 (229)
T 2avd_A 135 -DELLAAGEAGTFDVAVVDAD 154 (229)
T ss_dssp -HHHHHTTCTTCEEEEEECSC
T ss_pred -HHHHhcCCCCCccEEEECCC
Confidence 11211101157999999875
No 197
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.36 E-value=3.6e-07 Score=77.78 Aligned_cols=70 Identities=19% Similarity=0.178 Sum_probs=52.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC--CeeEEeccccchh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE--GVIQVQGDITNAR 106 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~--~v~~i~gDi~~~~ 106 (179)
.++.+|||||||+|+++..++.. + ..|+|+|+++.. .+. +++++++|+++..
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~-g--------------a~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l 216 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA-G--------------AEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFI 216 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT-T--------------CEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHH
T ss_pred CCCCcEEEcccccCHHHHHHHHc-C--------------CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHH
Confidence 46789999999999999999885 2 499999999831 233 3899999998753
Q ss_pred hHHHHHhhcCCCCccEEeeCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
.. +.. .+.+||+|++|.+
T Consensus 217 ~~--~~~--~~~~fD~Ii~dPP 234 (332)
T 2igt_A 217 QR--EER--RGSTYDIILTDPP 234 (332)
T ss_dssp HH--HHH--HTCCBSEEEECCC
T ss_pred HH--HHh--cCCCceEEEECCc
Confidence 11 110 1358999999975
No 198
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.36 E-value=4e-07 Score=74.96 Aligned_cols=103 Identities=11% Similarity=0.067 Sum_probs=70.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CCCCCeeEEeccccchhhHHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------APIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~~~~~v~~i~gDi~~~~~~~~ 110 (179)
.++++|||||||+|..|..++++. .+|+|+|+++. ...++++++++|+.+.+..
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~~~---------------~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~-- 90 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLTEC---------------DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFS-- 90 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTTTS---------------SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGG--
T ss_pred CCcCEEEEEcccccHHHHHHHHhC---------------CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHH--
Confidence 678999999999999999998862 68999999983 1246899999999987531
Q ss_pred HHhhcCCCCccEEeeCCCCCCCCCCcccHHHHHHHHHHHHHHH-----------------H-------HHHHHHHHHHhh
Q 030299 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAVSIQF-----------------F-------IYELVFCLRQLL 166 (179)
Q Consensus 111 l~~~~~~~~~D~VlsD~~~~~~g~~~~d~~~q~~L~~~AL~~~-----------------~-------~~~~~~~~~~~f 166 (179)
..+.+.++| |+++.+. ..+..++...|... + .++.+.++-|.|
T Consensus 91 --~~~~~~~~~-vv~NlPY----------~is~~il~~ll~~~~~~~~~~lm~QkEva~Rl~a~pg~k~yg~lsv~~q~~ 157 (255)
T 3tqs_A 91 --SVKTDKPLR-VVGNLPY----------NISTPLLFHLFSQIHCIEDMHFMLQKEVVRRITAEVGSHDYGRLSVMAQYF 157 (255)
T ss_dssp --GSCCSSCEE-EEEECCH----------HHHHHHHHHHHHTGGGEEEEEEEEEHHHHHHHTCCTTSTTCSHHHHHHHHH
T ss_pred --HhccCCCeE-EEecCCc----------ccCHHHHHHHHhCCCChheEEEEEeHHHHHHhhCCCCCCccchhhheeeee
Confidence 111234678 7777643 34445554444321 1 155667777877
Q ss_pred ceEEEe
Q 030299 167 QYVILD 172 (179)
Q Consensus 167 ~~v~~~ 172 (179)
-.|++.
T Consensus 158 ~~~~~~ 163 (255)
T 3tqs_A 158 CDNTYL 163 (255)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777654
No 199
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.35 E-value=6.1e-07 Score=78.69 Aligned_cols=70 Identities=20% Similarity=0.263 Sum_probs=53.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------APIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~~~~~v~~i~gDi~~~~~~ 108 (179)
.++.+|||||||+|.++..++++ . ..|+|+|+++. ..+.+++++++|+.+....
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~-~--------------~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~ 349 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ-A--------------ASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTK 349 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT-S--------------SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSS
T ss_pred CCCCEEEECCCCCCHHHHHHHhh-C--------------CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhh
Confidence 56789999999999999999886 2 68999999983 1246899999999873210
Q ss_pred HHHHhhcCCCCccEEeeCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~ 128 (179)
+ .+.+.+||+|++|.+
T Consensus 350 --~--~~~~~~fD~Vv~dPP 365 (433)
T 1uwv_A 350 --Q--PWAKNGFDKVLLDPA 365 (433)
T ss_dssp --S--GGGTTCCSEEEECCC
T ss_pred --h--hhhcCCCCEEEECCC
Confidence 0 023457999999854
No 200
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.35 E-value=8.7e-07 Score=76.56 Aligned_cols=72 Identities=19% Similarity=0.158 Sum_probs=54.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-C-CeeEEeccccchh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-E-GVIQVQGDITNAR 106 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~-~v~~i~gDi~~~~ 106 (179)
.++.+|||+|||+|+++..++... ...|+|+|+++.. .+ . +++++++|+++..
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g--------------~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~ 284 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG--------------CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLL 284 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT--------------CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHH
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC--------------CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHH
Confidence 578899999999999999998862 3689999999831 24 4 7899999998753
Q ss_pred hHHHHHhhcCCCCccEEeeCCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
. .+.. .+.+||+|++|.+.
T Consensus 285 ~--~~~~--~~~~fD~Ii~dpP~ 303 (396)
T 3c0k_A 285 R--TYRD--RGEKFDVIVMDPPK 303 (396)
T ss_dssp H--HHHH--TTCCEEEEEECCSS
T ss_pred H--HHHh--cCCCCCEEEECCCC
Confidence 2 1111 13589999999753
No 201
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.35 E-value=7.8e-07 Score=71.56 Aligned_cols=75 Identities=15% Similarity=0.092 Sum_probs=55.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~~ 107 (179)
.++.+|||||||+|..+..+++.++. .++|+++|+++.. .+ .+++++.+|..+..
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~------------~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l- 135 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPD------------DGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLAL- 135 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCT------------TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHH-
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCC------------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH-
Confidence 46779999999999999999998763 5899999999831 23 25889999987642
Q ss_pred HHHHHhh-cCCCCccEEeeCCC
Q 030299 108 AEVVIRH-FDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~-~~~~~~D~VlsD~~ 128 (179)
..+... ...++||+|++|+.
T Consensus 136 -~~l~~~~~~~~~fD~I~~d~~ 156 (237)
T 3c3y_A 136 -DNLLQGQESEGSYDFGFVDAD 156 (237)
T ss_dssp -HHHHHSTTCTTCEEEEEECSC
T ss_pred -HHHHhccCCCCCcCEEEECCc
Confidence 111111 01368999999964
No 202
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.35 E-value=3.6e-07 Score=75.68 Aligned_cols=71 Identities=11% Similarity=0.081 Sum_probs=48.0
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-C-----CCCCeeEEeccccchhhHHHHH
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-A-----PIEGVIQVQGDITNARTAEVVI 112 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-~-----~~~~v~~i~gDi~~~~~~~~l~ 112 (179)
+.++.+|||||||+|.++..++++ ...|+|+|+++. - ..... .+++|+.+.... +.
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~---------------g~~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~--~~ 104 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALER---------------GASVTVFDFSQRMCDDLAEALADR-CVTIDLLDITAE--IP 104 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHT---------------TCEEEEEESCHHHHHHHHHHTSSS-CCEEEECCTTSC--CC
T ss_pred CCCcCEEEEEeCcchHHHHHHHhc---------------CCEEEEEECCHHHHHHHHHHHHhc-cceeeeeecccc--cc
Confidence 378899999999999999999986 268999999983 1 11111 345666554310 00
Q ss_pred hhcCCCCccEEeeCCC
Q 030299 113 RHFDGCKADLVVCDGA 128 (179)
Q Consensus 113 ~~~~~~~~D~VlsD~~ 128 (179)
... +++||+|+++..
T Consensus 105 ~~~-~~~fD~Vv~~~~ 119 (261)
T 3iv6_A 105 KEL-AGHFDFVLNDRL 119 (261)
T ss_dssp GGG-TTCCSEEEEESC
T ss_pred ccc-CCCccEEEEhhh
Confidence 011 358999999864
No 203
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.34 E-value=7e-07 Score=72.49 Aligned_cols=75 Identities=12% Similarity=0.092 Sum_probs=55.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~~ 107 (179)
.++.+|||||||+|..+..+++.++. .++|+++|+++.. .. .+++++.+|..+..
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~------------~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l- 144 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPE------------DGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVL- 144 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCT------------TCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHH-
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCC------------CCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHH-
Confidence 45779999999999999999998753 5899999999831 22 36889999987642
Q ss_pred HHHHHhh-cCCCCccEEeeCCC
Q 030299 108 AEVVIRH-FDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~-~~~~~~D~VlsD~~ 128 (179)
..+... ...++||+|++|+.
T Consensus 145 -~~l~~~~~~~~~fD~V~~d~~ 165 (247)
T 1sui_A 145 -DEMIKDEKNHGSYDFIFVDAD 165 (247)
T ss_dssp -HHHHHSGGGTTCBSEEEECSC
T ss_pred -HHHHhccCCCCCEEEEEEcCc
Confidence 111110 01368999999975
No 204
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.34 E-value=1.3e-06 Score=81.20 Aligned_cols=70 Identities=14% Similarity=0.020 Sum_probs=54.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC--CCeeEEeccccchh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI--EGVIQVQGDITNAR 106 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~--~~v~~i~gDi~~~~ 106 (179)
.+|.+|||||||+|+++.+++.. + ..+|+++|+++.. .+ .+++++++|+++..
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~-g-------------a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l 603 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLG-G-------------ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL 603 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHT-T-------------CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHH
T ss_pred cCCCcEEEeeechhHHHHHHHHC-C-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHH
Confidence 46889999999999999999874 2 3579999999831 23 36899999998842
Q ss_pred hHHHHHhhcCCCCccEEeeCCCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGAPD 130 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~~~ 130 (179)
. ..+++||+|++|.+.-
T Consensus 604 ~-------~~~~~fD~Ii~DPP~f 620 (703)
T 3v97_A 604 R-------EANEQFDLIFIDPPTF 620 (703)
T ss_dssp H-------HCCCCEEEEEECCCSB
T ss_pred H-------hcCCCccEEEECCccc
Confidence 1 1246899999997643
No 205
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.33 E-value=1.8e-06 Score=71.30 Aligned_cols=75 Identities=19% Similarity=0.209 Sum_probs=54.4
Q ss_pred CCCEEEEEccCC---ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CCCCCeeEEeccccchhhH
Q 030299 41 GVKRVVDLCAAP---GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------APIEGVIQVQGDITNARTA 108 (179)
Q Consensus 41 ~g~~VlDLgagp---Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~~~~~v~~i~gDi~~~~~~ 108 (179)
+..+|||||||+ |.+++.+.+..+ ..+|+++|++|. ....+++++++|+++.+..
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p-------------~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~ 143 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNP-------------DARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYI 143 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCT-------------TCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCC-------------CCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhh
Confidence 347999999999 999887766644 589999999983 1235799999999986432
Q ss_pred ---HHHHhhcCCCCccEEeeCCC
Q 030299 109 ---EVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 109 ---~~l~~~~~~~~~D~VlsD~~ 128 (179)
.++.+.++-..+|+|++.+.
T Consensus 144 ~~~~~~~~~~d~~~~d~v~~~~v 166 (274)
T 2qe6_A 144 LNHPDVRRMIDFSRPAAIMLVGM 166 (274)
T ss_dssp HHSHHHHHHCCTTSCCEEEETTT
T ss_pred hccchhhccCCCCCCEEEEEech
Confidence 11112344347999998764
No 206
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.33 E-value=5.4e-07 Score=75.51 Aligned_cols=75 Identities=17% Similarity=0.056 Sum_probs=50.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC------CeeEEeccc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE------GVIQVQGDI 102 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~------~v~~i~gDi 102 (179)
.++.+|||||||+|+.+..++... ...|+|+|+++.. ... ++++.++|+
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~--------------~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~ 112 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGE--------------IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETI 112 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTT--------------CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCT
T ss_pred CCCCeEEEEecCCcHhHHHHHhcC--------------CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhc
Confidence 357899999999998776555432 3689999999831 111 256778888
Q ss_pred cchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 103 TNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 103 ~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
........+...+++++||+|+|..+
T Consensus 113 ~~d~~~~~l~~~~~~~~FD~V~~~~~ 138 (302)
T 2vdw_A 113 RSDTFVSSVREVFYFGKFNIIDWQFA 138 (302)
T ss_dssp TSSSHHHHHHTTCCSSCEEEEEEESC
T ss_pred ccchhhhhhhccccCCCeeEEEECch
Confidence 54333233433355678999998654
No 207
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.31 E-value=1.1e-06 Score=70.25 Aligned_cols=75 Identities=21% Similarity=0.239 Sum_probs=54.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CeeEEeccccchhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~-~v~~i~gDi~~~~~ 107 (179)
.++.+|||||||+|.++..+++..+. .++|+++|+++.. ... ++.++++|+.+...
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~------------~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~ 126 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPE------------DGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQ 126 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCT------------TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHH
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCC------------CCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHH
Confidence 57889999999999999999998752 4799999999831 223 38899999876321
Q ss_pred HHHHH---------hhcCC--CCccEEeeCCC
Q 030299 108 AEVVI---------RHFDG--CKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~---------~~~~~--~~~D~VlsD~~ 128 (179)
++. ..++. ++||+|+++..
T Consensus 127 --~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~ 156 (239)
T 2hnk_A 127 --VLIDSKSAPSWASDFAFGPSSIDLFFLDAD 156 (239)
T ss_dssp --HHHHCSSCCGGGTTTCCSTTCEEEEEECSC
T ss_pred --HHHhhcccccccccccCCCCCcCEEEEeCC
Confidence 111 11232 68999999853
No 208
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.31 E-value=9.5e-07 Score=76.03 Aligned_cols=70 Identities=21% Similarity=0.294 Sum_probs=54.3
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~~ 109 (179)
++.+|||+|||+|+++..++.. . ..|+|+|+++.. .+.+++++++|+.+...
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~--------------~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~-- 271 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-F--------------REVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLR-- 271 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-E--------------EEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHH--
T ss_pred CCCeEEEeeeccCHHHHHHHHh-C--------------CEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHH--
Confidence 7889999999999999999987 3 689999999831 24568999999987532
Q ss_pred HHHhhcCCCCccEEeeCCCC
Q 030299 110 VVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~~ 129 (179)
.+.. .+.+||+|++|.+.
T Consensus 272 ~~~~--~~~~fD~Ii~dpP~ 289 (382)
T 1wxx_A 272 RLEK--EGERFDLVVLDPPA 289 (382)
T ss_dssp HHHH--TTCCEEEEEECCCC
T ss_pred HHHh--cCCCeeEEEECCCC
Confidence 1111 24589999999753
No 209
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.29 E-value=7.7e-07 Score=70.20 Aligned_cols=64 Identities=17% Similarity=0.144 Sum_probs=50.9
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhH
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~ 108 (179)
++++.+|||+|||+|.++..++++ ..|+|+|+++.. ...++.++++|+.+.+
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~----------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-- 92 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH----------------YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELE-- 92 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT----------------SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCC--
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC----------------CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcC--
Confidence 577899999999999999988664 479999999831 1247899999998754
Q ss_pred HHHHhhcCCCCccEEeeCC
Q 030299 109 EVVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~ 127 (179)
++ .+||+|++..
T Consensus 93 ------~~-~~fD~v~~~~ 104 (243)
T 3d2l_A 93 ------LP-EPVDAITILC 104 (243)
T ss_dssp ------CS-SCEEEEEECT
T ss_pred ------CC-CCcCEEEEeC
Confidence 23 6899999864
No 210
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.29 E-value=6.5e-07 Score=69.68 Aligned_cols=68 Identities=19% Similarity=0.232 Sum_probs=51.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCeeEEeccccchhhHHHHHhhc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHF 115 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----~~~~v~~i~gDi~~~~~~~~l~~~~ 115 (179)
.++.+|||+|||+|.++..++++ + ..|+|+|+++.. ......++++|+.+... .+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~--------------~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~------~~ 89 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G--------------TRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDM------PY 89 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T--------------CEEEEEESSHHHHHHHHTTSSEEEESCTTTCCC------CS
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C--------------CeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCC------CC
Confidence 57889999999999999999876 4 689999999831 11224678899886321 13
Q ss_pred CCCCccEEeeCCC
Q 030299 116 DGCKADLVVCDGA 128 (179)
Q Consensus 116 ~~~~~D~VlsD~~ 128 (179)
++++||+|++...
T Consensus 90 ~~~~fD~v~~~~~ 102 (230)
T 3cc8_A 90 EEEQFDCVIFGDV 102 (230)
T ss_dssp CTTCEEEEEEESC
T ss_pred CCCccCEEEECCh
Confidence 4568999998653
No 211
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.28 E-value=1.2e-06 Score=72.57 Aligned_cols=69 Identities=13% Similarity=0.082 Sum_probs=53.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CC------CCCeeEEeccccc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------AP------IEGVIQVQGDITN 104 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~~------~~~v~~i~gDi~~ 104 (179)
.++.+|||||||+|+++..+++..+ ..+|+++|+++. .. .++++++.+|+.+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~-------------~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~ 143 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKS-------------VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASK 143 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT-------------CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHH
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCC-------------CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHH
Confidence 4578999999999999999987543 479999999983 11 3578999999876
Q ss_pred hhhHHHHHhhcCCCCccEEeeCCC
Q 030299 105 ARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 105 ~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
... . .+++||+|++|..
T Consensus 144 ~l~------~-~~~~fD~Ii~d~~ 160 (283)
T 2i7c_A 144 FLE------N-VTNTYDVIIVDSS 160 (283)
T ss_dssp HHH------H-CCSCEEEEEEECC
T ss_pred HHH------h-CCCCceEEEEcCC
Confidence 421 1 2468999999974
No 212
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.28 E-value=1.5e-06 Score=74.10 Aligned_cols=70 Identities=19% Similarity=0.163 Sum_probs=54.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------------CCCCeeEEeccccc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------PIEGVIQVQGDITN 104 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---------------~~~~v~~i~gDi~~ 104 (179)
.++.+|||||||+|..+..+++..+ ..+|+++|+++.. ..++++++++|+.+
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~-------------~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~ 185 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHAS-------------IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVA 185 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTT-------------CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHH
T ss_pred CCCCEEEEECCCccHHHHHHHHcCC-------------CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHH
Confidence 5678999999999999999987643 4799999999831 12579999999876
Q ss_pred hhhHHHHHhhcCCCCccEEeeCCC
Q 030299 105 ARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 105 ~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
.. ..+++++||+|++|..
T Consensus 186 ~l------~~~~~~~fDlIi~d~~ 203 (334)
T 1xj5_A 186 FL------KNAAEGSYDAVIVDSS 203 (334)
T ss_dssp HH------HTSCTTCEEEEEECCC
T ss_pred HH------HhccCCCccEEEECCC
Confidence 41 1133468999999975
No 213
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.28 E-value=7.9e-07 Score=70.01 Aligned_cols=64 Identities=23% Similarity=0.222 Sum_probs=51.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~ 109 (179)
.++.+|||+|||+|.++..++++ + ..|+|+|+++.. ...++.++++|+.+.+
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~-~--------------~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--- 97 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPK-F--------------KNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN--- 97 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGG-S--------------SEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC---
T ss_pred CCCCeEEEeCCCCCHHHHHHHHC-C--------------CcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCC---
Confidence 37789999999999999999876 2 589999999831 0127899999998864
Q ss_pred HHHhhcCCCCccEEeeCC
Q 030299 110 VVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~ 127 (179)
++ ++||+|++..
T Consensus 98 -----~~-~~fD~v~~~~ 109 (246)
T 1y8c_A 98 -----IN-RKFDLITCCL 109 (246)
T ss_dssp -----CS-CCEEEEEECT
T ss_pred -----cc-CCceEEEEcC
Confidence 23 6899999965
No 214
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.28 E-value=8e-07 Score=71.76 Aligned_cols=64 Identities=22% Similarity=0.236 Sum_probs=49.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCeeEEeccccchhhHHHHHh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
.++.+|||||||+|.++..++++ ...|+|+|+++.. ...+ .++++|+.+.+
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~---------------~~~v~gvD~s~~~l~~a~~~~~~-~~~~~d~~~~~------- 109 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER---------------GFEVVLVDPSKEMLEVAREKGVK-NVVEAKAEDLP------- 109 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT---------------TCEEEEEESCHHHHHHHHHHTCS-CEEECCTTSCC-------
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc---------------CCeEEEEeCCHHHHHHHHhhcCC-CEEECcHHHCC-------
Confidence 57889999999999999999876 2689999999831 1122 27889998754
Q ss_pred hcCCCCccEEeeCC
Q 030299 114 HFDGCKADLVVCDG 127 (179)
Q Consensus 114 ~~~~~~~D~VlsD~ 127 (179)
++++.||+|++..
T Consensus 110 -~~~~~fD~v~~~~ 122 (260)
T 2avn_A 110 -FPSGAFEAVLALG 122 (260)
T ss_dssp -SCTTCEEEEEECS
T ss_pred -CCCCCEEEEEEcc
Confidence 3457899999864
No 215
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.27 E-value=6e-07 Score=70.14 Aligned_cols=69 Identities=19% Similarity=0.089 Sum_probs=52.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~~ 107 (179)
.++.+|||+|||+|.++..+++..+. .++|+++|+++.. .. .+++++++|..+..
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 121 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISI------------SSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIA- 121 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCT------------TCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHH-
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCC------------CCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHh-
Confidence 46779999999999999999987652 4799999999831 12 35889999987641
Q ss_pred HHHHHhhcCCCCccEEeeCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~ 128 (179)
..+ +. ||+|++|+.
T Consensus 122 -----~~~-~~-fD~v~~~~~ 135 (210)
T 3c3p_A 122 -----AGQ-RD-IDILFMDCD 135 (210)
T ss_dssp -----TTC-CS-EEEEEEETT
T ss_pred -----ccC-CC-CCEEEEcCC
Confidence 112 34 999999853
No 216
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.27 E-value=1.4e-06 Score=73.80 Aligned_cols=69 Identities=13% Similarity=0.082 Sum_probs=53.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CC------CCCeeEEeccccc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------AP------IEGVIQVQGDITN 104 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~~------~~~v~~i~gDi~~ 104 (179)
.++.+|||||||+|+.+..+++..+ ..+|+++|+++. .. .++++++++|+.+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~-------------~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~ 181 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKS-------------VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASK 181 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTT-------------CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHH
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCC-------------CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHH
Confidence 4568999999999999999987643 479999999983 11 2579999999876
Q ss_pred hhhHHHHHhhcCCCCccEEeeCCC
Q 030299 105 ARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 105 ~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
... . .+++||+|++|..
T Consensus 182 ~l~------~-~~~~fDvIi~d~~ 198 (321)
T 2pt6_A 182 FLE------N-VTNTYDVIIVDSS 198 (321)
T ss_dssp HHH------H-CCSCEEEEEEECC
T ss_pred HHh------h-cCCCceEEEECCc
Confidence 421 1 2468999999974
No 217
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.27 E-value=7.6e-07 Score=74.56 Aligned_cols=71 Identities=14% Similarity=0.040 Sum_probs=54.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------------CCCCeeEEeccccc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------PIEGVIQVQGDITN 104 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---------------~~~~v~~i~gDi~~ 104 (179)
.++.+|||||||+|+++..+++..+ ...|+++|+++.. ..++++++.+|+.+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-------------~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~ 160 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGT-------------VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLA 160 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTT-------------CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCC-------------CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH
Confidence 5678999999999999999987643 4799999999831 12579999999877
Q ss_pred hhhHHHHHhhcCCCCccEEeeCCCC
Q 030299 105 ARTAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 105 ~~~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
... ...+++||+|++|...
T Consensus 161 ~~~------~~~~~~fDvIi~d~~~ 179 (304)
T 3bwc_A 161 FVR------QTPDNTYDVVIIDTTD 179 (304)
T ss_dssp HHH------SSCTTCEEEEEEECC-
T ss_pred HHH------hccCCceeEEEECCCC
Confidence 421 1135689999998753
No 218
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.26 E-value=8.8e-07 Score=72.28 Aligned_cols=68 Identities=21% Similarity=0.253 Sum_probs=52.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------------CCCCeeEEeccccc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------PIEGVIQVQGDITN 104 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---------------~~~~v~~i~gDi~~ 104 (179)
.++.+|||||||+|.++..++++ + ..|+|+|+++.. ...++.+.++|+.+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~-~--------------~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 120 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEE-G--------------FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT 120 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG
T ss_pred cCCCEEEEecCCCCHHHHHHHHC-C--------------CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh
Confidence 46789999999999999999886 2 599999999831 12467788999887
Q ss_pred hhhHHHHHhhcCCCCccEEeeCC
Q 030299 105 ARTAEVVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 105 ~~~~~~l~~~~~~~~~D~VlsD~ 127 (179)
.+. .+ +++++||+|++.+
T Consensus 121 ~~~--~~---~~~~~fD~V~~~g 138 (293)
T 3thr_A 121 LDK--DV---PAGDGFDAVICLG 138 (293)
T ss_dssp HHH--HS---CCTTCEEEEEECT
T ss_pred Ccc--cc---ccCCCeEEEEEcC
Confidence 531 11 3567899999963
No 219
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.26 E-value=9.3e-07 Score=72.79 Aligned_cols=62 Identities=19% Similarity=0.164 Sum_probs=49.4
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CC-----CCeeEEeccccchh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PI-----EGVIQVQGDITNAR 106 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---------~~-----~~v~~i~gDi~~~~ 106 (179)
++.+|||||||+|.++..++++ + ..|+|+|+++.. .. .+++++++|+.+.+
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~-~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 146 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL-G--------------WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA 146 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT-T--------------CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC
T ss_pred CCCcEEEEeccCCHHHHHHHHc-C--------------CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC
Confidence 3459999999999999999886 2 589999999831 11 57999999999864
Q ss_pred hHHHHHhhcCCCCccEEeeC
Q 030299 107 TAEVVIRHFDGCKADLVVCD 126 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD 126 (179)
+ +++||+|++.
T Consensus 147 --------~-~~~fD~v~~~ 157 (299)
T 3g2m_A 147 --------L-DKRFGTVVIS 157 (299)
T ss_dssp --------C-SCCEEEEEEC
T ss_pred --------c-CCCcCEEEEC
Confidence 2 4689998864
No 220
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.26 E-value=6.3e-07 Score=85.00 Aligned_cols=69 Identities=19% Similarity=0.244 Sum_probs=55.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------C-----------CCCCeeEEeccc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------A-----------PIEGVIQVQGDI 102 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~------~-----------~~~~v~~i~gDi 102 (179)
.++.+|||||||+|.++..++++.++ ...|+|+|+++. + ..++++++++|+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p------------~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa 787 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTS------------LQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI 787 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCC------------CCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCC------------CCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch
Confidence 37889999999999999999887532 469999999983 1 235799999999
Q ss_pred cchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 103 TNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 103 ~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
++.+ +..+.||+|++...
T Consensus 788 ~dLp--------~~d~sFDlVV~~eV 805 (950)
T 3htx_A 788 LEFD--------SRLHDVDIGTCLEV 805 (950)
T ss_dssp TSCC--------TTSCSCCEEEEESC
T ss_pred HhCC--------cccCCeeEEEEeCc
Confidence 9865 34578999999543
No 221
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.25 E-value=7.2e-07 Score=77.00 Aligned_cols=73 Identities=22% Similarity=0.265 Sum_probs=55.2
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~-~v~~i~gDi~~~~ 106 (179)
.+++.+|||+|||+|+++..++.. + ...|+|+|+++.. .+. +++++++|+.+..
T Consensus 215 ~~~~~~VLDl~~G~G~~~~~la~~-g-------------~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~ 280 (396)
T 2as0_A 215 VQPGDRVLDVFTYTGGFAIHAAIA-G-------------ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEM 280 (396)
T ss_dssp CCTTCEEEETTCTTTHHHHHHHHT-T-------------CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHH
T ss_pred hhCCCeEEEecCCCCHHHHHHHHC-C-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHH
Confidence 358899999999999999999986 3 3689999999831 233 7899999998753
Q ss_pred hHHHHHhhcCCCCccEEeeCCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
. .+.. .+.+||+|++|.+.
T Consensus 281 ~--~~~~--~~~~fD~Vi~dpP~ 299 (396)
T 2as0_A 281 E--KLQK--KGEKFDIVVLDPPA 299 (396)
T ss_dssp H--HHHH--TTCCEEEEEECCCC
T ss_pred H--HHHh--hCCCCCEEEECCCC
Confidence 2 1111 24589999999653
No 222
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.23 E-value=2.9e-07 Score=75.81 Aligned_cols=69 Identities=20% Similarity=0.111 Sum_probs=52.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCC-------CC-----------CCCC-eeEEec
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP-------MA-----------PIEG-VIQVQG 100 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~-------~~-----------~~~~-v~~i~g 100 (179)
.++.+|||+|||+|..+..++.+ + ++|+|+|+++ .. .+.+ ++++++
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~-g--------------~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~ 146 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASL-G--------------LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFG 146 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHT-T--------------CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEES
T ss_pred CCcCeEEEeeCccCHHHHHHHHh-C--------------CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEEC
Confidence 56789999999999999999986 2 6899999999 21 1224 899999
Q ss_pred cccchhhHHHHHhhcCC--CCccEEeeCCCC
Q 030299 101 DITNARTAEVVIRHFDG--CKADLVVCDGAP 129 (179)
Q Consensus 101 Di~~~~~~~~l~~~~~~--~~~D~VlsD~~~ 129 (179)
|+.+... .+++ ..||+|++|...
T Consensus 147 d~~~~l~------~~~~~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 147 NAAEQMP------ALVKTQGKPDIVYLDPMY 171 (258)
T ss_dssp CHHHHHH------HHHHHHCCCSEEEECCCC
T ss_pred CHHHHHH------hhhccCCCccEEEECCCC
Confidence 9887421 1222 579999999764
No 223
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.23 E-value=3e-06 Score=71.25 Aligned_cols=78 Identities=22% Similarity=0.345 Sum_probs=56.6
Q ss_pred hHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CC-CCeeEEe
Q 030299 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQ 99 (179)
Q Consensus 31 eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~-~~v~~i~ 99 (179)
++.+.+++-+++.+|||+|||+|.++..++++.+ ..+++++|+..+. +. .+++++.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~ 235 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHP-------------QLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFE 235 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCT-------------TCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEE
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCC-------------CCeEEEEECHHHHHHHHHHHHhcCCCCceEEEe
Confidence 3444444323388999999999999999999875 5799999994331 12 3699999
Q ss_pred ccccchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 100 GDITNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 100 gDi~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
+|+++.+. +...+||+|++...
T Consensus 236 ~d~~~~~~-------~~~~~~D~v~~~~v 257 (352)
T 3mcz_A 236 KNLLDARN-------FEGGAADVVMLNDC 257 (352)
T ss_dssp CCTTCGGG-------GTTCCEEEEEEESC
T ss_pred CCcccCcc-------cCCCCccEEEEecc
Confidence 99998642 12356999998543
No 224
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.22 E-value=1.2e-06 Score=72.70 Aligned_cols=71 Identities=15% Similarity=0.136 Sum_probs=51.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------------------CCCCeeEEecc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------------PIEGVIQVQGD 101 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------------------~~~~v~~i~gD 101 (179)
+++.+|||||||+|.++..+++. + ...|+|+|+++.. ...++.++++|
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~-~-------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D 98 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG-R-------------INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITAD 98 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT-T-------------CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECC
T ss_pred CCCCEEEEECCCCcHHHHHHHhc-C-------------CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEec
Confidence 57889999999999999999874 2 4799999999831 12378899999
Q ss_pred ccchhhHHHHHhhcC--CCCccEEeeCCC
Q 030299 102 ITNARTAEVVIRHFD--GCKADLVVCDGA 128 (179)
Q Consensus 102 i~~~~~~~~l~~~~~--~~~~D~VlsD~~ 128 (179)
+.+.+.. ..++ +++||+|++..+
T Consensus 99 ~~~~~~~----~~~~~~~~~fD~V~~~~~ 123 (313)
T 3bgv_A 99 SSKELLI----DKFRDPQMCFDICSCQFV 123 (313)
T ss_dssp TTTSCST----TTCSSTTCCEEEEEEETC
T ss_pred ccccchh----hhcccCCCCEEEEEEecc
Confidence 9886410 0122 348999999654
No 225
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.22 E-value=3.2e-06 Score=70.30 Aligned_cols=76 Identities=16% Similarity=0.180 Sum_probs=56.3
Q ss_pred hHHHHhCC-CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CC-CCeeEE
Q 030299 31 QIDEEFNI-FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQV 98 (179)
Q Consensus 31 eid~~~~l-l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~-~~v~~i 98 (179)
++.+.+.+ +.++.+|||+|||+|.++..++++.+ ..+++++|++.+. .+ .+++++
T Consensus 154 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~ 220 (335)
T 2r3s_A 154 LIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNP-------------NAEIFGVDWASVLEVAKENARIQGVASRYHTI 220 (335)
T ss_dssp HHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCT-------------TCEEEEEECHHHHHHHHHHHHHHTCGGGEEEE
T ss_pred HHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCC-------------CCeEEEEecHHHHHHHHHHHHhcCCCcceEEE
Confidence 34444543 26778999999999999999999875 4799999998431 12 359999
Q ss_pred eccccchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 99 QGDITNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 99 ~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
.+|+++.+ +++ +||+|++...
T Consensus 221 ~~d~~~~~--------~~~-~~D~v~~~~~ 241 (335)
T 2r3s_A 221 AGSAFEVD--------YGN-DYDLVLLPNF 241 (335)
T ss_dssp ESCTTTSC--------CCS-CEEEEEEESC
T ss_pred ecccccCC--------CCC-CCcEEEEcch
Confidence 99998753 233 4999998543
No 226
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.21 E-value=8.2e-07 Score=71.39 Aligned_cols=35 Identities=29% Similarity=0.401 Sum_probs=30.8
Q ss_pred CCCEEEEEccCCChHHHHHHHH--hCCCCCCCCCCCCCCCCeEEEEeCCC
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRK--LYLPAKLSPDSREGDLPLIVAIDLQP 88 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~--~~~~~~~~~~~~~~~~~~VvavD~~~ 88 (179)
++.+|||+|||+|.++..++++ .+ ...|+|+|+++
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~-------------~~~v~gvDis~ 87 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRS-------------LRQVIASDVDP 87 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGG-------------EEEEEEEESCH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccC-------------CCeEEEEECCH
Confidence 5679999999999999999987 33 36899999998
No 227
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.20 E-value=2.9e-06 Score=71.75 Aligned_cols=65 Identities=20% Similarity=0.374 Sum_probs=51.6
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCC-C----CCCCCeeEEeccccchhhHHHHHh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP-M----APIEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~-~----~~~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
+.++.+|||||||+|.++..++++.+ ..+++++|+ | + ...++++++.+|+++.
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~-------- 243 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFP-------------KLKCIVFDR-PQVVENLSGSNNLTYVGGDMFTS-------- 243 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEEC-HHHHTTCCCBTTEEEEECCTTTC--------
T ss_pred cccCceEEEeCCCccHHHHHHHHHCC-------------CCeEEEeeC-HHHHhhcccCCCcEEEeccccCC--------
Confidence 35678999999999999999999875 478999999 5 2 2346799999999762
Q ss_pred hcCCCCccEEeeCCC
Q 030299 114 HFDGCKADLVVCDGA 128 (179)
Q Consensus 114 ~~~~~~~D~VlsD~~ 128 (179)
++ .||+|++...
T Consensus 244 -~p--~~D~v~~~~~ 255 (352)
T 1fp2_A 244 -IP--NADAVLLKYI 255 (352)
T ss_dssp -CC--CCSEEEEESC
T ss_pred -CC--CccEEEeehh
Confidence 23 3899887543
No 228
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.20 E-value=2.2e-06 Score=76.48 Aligned_cols=66 Identities=17% Similarity=0.273 Sum_probs=52.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CC-CCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~-~~v~~i~gDi~~~~~~ 108 (179)
.++.+|||||||+|.++..+++. + ..+|+|+|++++. .+ .+++++++|+.+.+
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~-~-------------~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~-- 220 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQA-G-------------ARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVS-- 220 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHT-T-------------CSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCC--
T ss_pred cCCCEEEEecCcccHHHHHHHHc-C-------------CCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCc--
Confidence 46789999999999999998874 3 4699999999841 22 57999999998853
Q ss_pred HHHHhhcCCCCccEEeeCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~ 128 (179)
++ ++||+|+++..
T Consensus 221 ------~~-~~fD~Ivs~~~ 233 (480)
T 3b3j_A 221 ------LP-EQVDIIISEPM 233 (480)
T ss_dssp ------CS-SCEEEEECCCC
T ss_pred ------cC-CCeEEEEEeCc
Confidence 23 47999999753
No 229
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.19 E-value=6.8e-06 Score=69.50 Aligned_cols=66 Identities=18% Similarity=0.229 Sum_probs=51.9
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCC-CCeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------API-EGVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~~~-~~v~~i~gDi~~~~ 106 (179)
++++.+|||+|||+|.++..++++.+ ...++++|+ +. ..+ .+++++.+|+++.
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~-------------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 244 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAP-------------HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKP- 244 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC-
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCC-------------CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCc-
Confidence 36788999999999999999999875 579999999 62 112 3799999999863
Q ss_pred hHHHHHhhcCCCCccEEeeCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
++. .||+|++...
T Consensus 245 --------~~~-~~D~v~~~~v 257 (374)
T 1qzz_A 245 --------LPV-TADVVLLSFV 257 (374)
T ss_dssp --------CSC-CEEEEEEESC
T ss_pred --------CCC-CCCEEEEecc
Confidence 232 4999998654
No 230
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.18 E-value=7.3e-07 Score=78.35 Aligned_cols=73 Identities=19% Similarity=0.128 Sum_probs=54.5
Q ss_pred CCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------------CCCCeeEEeccccc
Q 030299 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------PIEGVIQVQGDITN 104 (179)
Q Consensus 38 ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-------------~~~~v~~i~gDi~~ 104 (179)
++++|.+|||||||+|..+..++.. ..+|+|+|+++.. ...+++++++|+.+
T Consensus 90 ~l~~g~~VLDLgcG~G~~al~LA~~---------------g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~ 154 (410)
T 3ll7_A 90 FIREGTKVVDLTGGLGIDFIALMSK---------------ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKE 154 (410)
T ss_dssp GSCTTCEEEESSCSSSHHHHHHHTT---------------CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGG
T ss_pred hcCCCCEEEEeCCCchHHHHHHHhc---------------CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHH
Confidence 3456899999999999999988765 3699999999831 23568999999988
Q ss_pred hhhHHHHHhhcCCCCccEEeeCCCCCC
Q 030299 105 ARTAEVVIRHFDGCKADLVVCDGAPDV 131 (179)
Q Consensus 105 ~~~~~~l~~~~~~~~~D~VlsD~~~~~ 131 (179)
.-.. +.+.+||+|++|.+-..
T Consensus 155 ~L~~------~~~~~fDvV~lDPPrr~ 175 (410)
T 3ll7_A 155 YLPL------IKTFHPDYIYVDPARRS 175 (410)
T ss_dssp SHHH------HHHHCCSEEEECCEEC-
T ss_pred hhhh------ccCCCceEEEECCCCcC
Confidence 4210 11247999999976443
No 231
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.18 E-value=3.1e-06 Score=69.55 Aligned_cols=78 Identities=9% Similarity=0.030 Sum_probs=45.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeE--EEEeCCCC----------C--CCCCeeEE--ecccc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLI--VAIDLQPM----------A--PIEGVIQV--QGDIT 103 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~V--vavD~~~~----------~--~~~~v~~i--~gDi~ 103 (179)
+++.+|||||||+|..+..++..+... .+...| +|+|+++. . .++++.+. ++|+.
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~---------~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~ 121 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQ---------YPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSS 121 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHH---------STTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhh---------CCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchh
Confidence 467899999999998887554433100 013544 99999972 0 23455443 44443
Q ss_pred chhhHHHHHhhcCCCCccEEeeCCC
Q 030299 104 NARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 104 ~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
+.+ ......+++++||+|++...
T Consensus 122 ~~~--~~~~~~~~~~~fD~V~~~~~ 144 (292)
T 2aot_A 122 EYQ--SRMLEKKELQKWDFIHMIQM 144 (292)
T ss_dssp HHH--HHHHTTTCCCCEEEEEEESC
T ss_pred hhh--hhhccccCCCceeEEEEeee
Confidence 321 11111134578999998654
No 232
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.17 E-value=5.1e-06 Score=68.59 Aligned_cols=70 Identities=10% Similarity=0.029 Sum_probs=53.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------------C--CCCeeEEeccccc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------P--IEGVIQVQGDITN 104 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-------------~--~~~v~~i~gDi~~ 104 (179)
.++.+|||||||.|+.+..+++..+ ..+|++||+++.. . .++++++.+|..+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~-------------~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~ 140 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPS-------------VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFM 140 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTT-------------CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHH
T ss_pred CCCCEEEEECCchHHHHHHHHhCCC-------------CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHH
Confidence 3568999999999999999987643 4799999999830 1 2579999999876
Q ss_pred hhhHHHHHhhcCCCCccEEeeCCCC
Q 030299 105 ARTAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 105 ~~~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
.- .. .+++||+|++|...
T Consensus 141 ~l------~~-~~~~fD~Ii~d~~~ 158 (275)
T 1iy9_A 141 HI------AK-SENQYDVIMVDSTE 158 (275)
T ss_dssp HH------HT-CCSCEEEEEESCSS
T ss_pred HH------hh-CCCCeeEEEECCCC
Confidence 31 11 24689999999753
No 233
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.17 E-value=1.8e-06 Score=71.38 Aligned_cols=68 Identities=13% Similarity=0.149 Sum_probs=52.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC--------C-------------CCCCeeEE
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM--------A-------------PIEGVIQV 98 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~--------~-------------~~~~v~~i 98 (179)
.++.+|||||||+|+.+..+++. + ..+|+++|+++. . ..++++++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~-------------~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~ 139 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-D-------------VDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLT 139 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-C-------------CSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-C-------------CCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEE
Confidence 45789999999999999999887 5 479999999972 1 12578899
Q ss_pred eccccchhhHHHHHhhcCCCCccEEeeCCCC
Q 030299 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 99 ~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
.+|..+.. .. +++||+|++|...
T Consensus 140 ~~D~~~~l------~~--~~~fD~Ii~d~~~ 162 (281)
T 1mjf_A 140 IGDGFEFI------KN--NRGFDVIIADSTD 162 (281)
T ss_dssp ESCHHHHH------HH--CCCEEEEEEECCC
T ss_pred ECchHHHh------cc--cCCeeEEEECCCC
Confidence 99986531 11 3589999999753
No 234
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.17 E-value=3.3e-06 Score=72.45 Aligned_cols=69 Identities=16% Similarity=0.032 Sum_probs=52.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccc-hhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITN-ART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~-~~~ 107 (179)
.++.+||||| |+|.++..++.+.+ ..+|+|+|+++.. .+.+++++++|+.+ .+.
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~-------------~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~ 236 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGL-------------PKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPD 236 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTC-------------CSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCT
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCC-------------CCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchh
Confidence 3678999999 99999999987643 4799999999731 23479999999988 321
Q ss_pred HHHHHhhcCCCCccEEeeCCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
..+..||+|++|.+.
T Consensus 237 -------~~~~~fD~Vi~~~p~ 251 (373)
T 2qm3_A 237 -------YALHKFDTFITDPPE 251 (373)
T ss_dssp -------TTSSCBSEEEECCCS
T ss_pred -------hccCCccEEEECCCC
Confidence 013579999999754
No 235
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.15 E-value=2.3e-06 Score=72.61 Aligned_cols=64 Identities=25% Similarity=0.350 Sum_probs=51.9
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~ 106 (179)
+.++.+|||+|||+|.++.. +. + ...|+|+|+++.. .+ .+++++++|+.+..
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~--~-------------~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~ 256 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CK--N-------------AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD 256 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TT--T-------------SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC
T ss_pred cCCCCEEEEccCccCHHHHh-cc--C-------------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc
Confidence 46889999999999999999 76 3 4799999999831 23 47999999998852
Q ss_pred hHHHHHhhcCCCCccEEeeCCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
..||+|++|.+.
T Consensus 257 -----------~~fD~Vi~dpP~ 268 (336)
T 2yx1_A 257 -----------VKGNRVIMNLPK 268 (336)
T ss_dssp -----------CCEEEEEECCTT
T ss_pred -----------CCCcEEEECCcH
Confidence 579999998643
No 236
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.15 E-value=7.6e-06 Score=68.67 Aligned_cols=83 Identities=13% Similarity=0.149 Sum_probs=61.6
Q ss_pred HhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----CC--CCeeEEeccc
Q 030299 30 LQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----PI--EGVIQVQGDI 102 (179)
Q Consensus 30 ~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----~~--~~v~~i~gDi 102 (179)
.|+.+... ++++..+||.+||.||.|..++++ + ++|+|+|.+|.. .+ ++++++++|+
T Consensus 12 ~e~le~L~-~~~gg~~VD~T~G~GGHS~~il~~-~--------------g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f 75 (285)
T 1wg8_A 12 QEALDLLA-VRPGGVYVDATLGGAGHARGILER-G--------------GRVIGLDQDPEAVARAKGLHLPGLTVVQGNF 75 (285)
T ss_dssp HHHHHHHT-CCTTCEEEETTCTTSHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHTCCTTEEEEESCG
T ss_pred HHHHHhhC-CCCCCEEEEeCCCCcHHHHHHHHC-C--------------CEEEEEeCCHHHHHHHHhhccCCEEEEECCc
Confidence 34444444 378889999999999999999997 3 799999999931 02 5799999999
Q ss_pred cchhhHHHHHhhcCCCCccEEeeCCCCCC
Q 030299 103 TNARTAEVVIRHFDGCKADLVVCDGAPDV 131 (179)
Q Consensus 103 ~~~~~~~~l~~~~~~~~~D~VlsD~~~~~ 131 (179)
.+... +.+..+..+||.|+.|.+.+.
T Consensus 76 ~~l~~---~L~~~g~~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 76 RHLKR---HLAALGVERVDGILADLGVSS 101 (285)
T ss_dssp GGHHH---HHHHTTCSCEEEEEEECSCCH
T ss_pred chHHH---HHHHcCCCCcCEEEeCCcccc
Confidence 98653 222333357999999886443
No 237
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.15 E-value=4.1e-06 Score=73.58 Aligned_cols=64 Identities=13% Similarity=0.157 Sum_probs=52.0
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~ 107 (179)
+.++.+|||+|||+|.++..+++. ...|+|+|+++.. .+. ++++++|+.+..
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~---------------~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~- 350 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR---------------GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVS- 350 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT---------------TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCC-
T ss_pred cCCCCEEEEeeccchHHHHHHHHc---------------CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcC-
Confidence 578899999999999999999885 2689999999831 234 889999998852
Q ss_pred HHHHHhhcCCCCccEEeeCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~ 128 (179)
+. .||+|++|.+
T Consensus 351 --------~~-~fD~Vv~dPP 362 (425)
T 2jjq_A 351 --------VK-GFDTVIVDPP 362 (425)
T ss_dssp --------CT-TCSEEEECCC
T ss_pred --------cc-CCCEEEEcCC
Confidence 22 7999999864
No 238
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.15 E-value=1.9e-06 Score=72.54 Aligned_cols=70 Identities=16% Similarity=0.107 Sum_probs=54.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CC-------CCCeeEEecccc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------AP-------IEGVIQVQGDIT 103 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~~-------~~~v~~i~gDi~ 103 (179)
.++.+|||||||+|+++..+++..+ ..+|+++|+++. .. .++++++.+|+.
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~-------------~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~ 142 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPT-------------VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDAR 142 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTT-------------CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCC-------------CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHH
Confidence 4568999999999999999988643 479999999983 11 257999999987
Q ss_pred chhhHHHHHhhcCCCCccEEeeCCCC
Q 030299 104 NARTAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 104 ~~~~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
+... . .+++||+|++|...
T Consensus 143 ~~l~------~-~~~~fD~Ii~d~~~ 161 (314)
T 1uir_A 143 AYLE------R-TEERYDVVIIDLTD 161 (314)
T ss_dssp HHHH------H-CCCCEEEEEEECCC
T ss_pred HHHH------h-cCCCccEEEECCCC
Confidence 7411 1 24689999999754
No 239
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.15 E-value=1.9e-06 Score=72.42 Aligned_cols=69 Identities=10% Similarity=0.120 Sum_probs=53.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------------CCCCeeEEeccccc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------PIEGVIQVQGDITN 104 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---------------~~~~v~~i~gDi~~ 104 (179)
.++.+|||||||+|..+..++++.+ ..+|+++|+++.. ..++++++.+|..+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-------------~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~ 160 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPS-------------VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFE 160 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT-------------CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHcCC-------------CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH
Confidence 4568999999999999999987643 4799999999831 13578999999876
Q ss_pred hhhHHHHHhhcCCCCccEEeeCCC
Q 030299 105 ARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 105 ~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
.- . ..+++||+|++|..
T Consensus 161 ~l------~-~~~~~fD~Ii~d~~ 177 (304)
T 2o07_A 161 FM------K-QNQDAFDVIITDSS 177 (304)
T ss_dssp HH------H-TCSSCEEEEEEECC
T ss_pred HH------h-hCCCCceEEEECCC
Confidence 31 1 12468999999875
No 240
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.15 E-value=2e-06 Score=68.71 Aligned_cols=73 Identities=22% Similarity=0.211 Sum_probs=54.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~~ 107 (179)
.++.+|||+|||+|.++..++..++. .++|+++|+++.. .. .+++++.+|+.+..
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~------------~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l- 137 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPP------------DGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATL- 137 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCT------------TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHH-
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCC------------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH-
Confidence 46789999999999999999988752 5799999999831 12 35889999986531
Q ss_pred HHHHHhhcCC--CCccEEeeCCC
Q 030299 108 AEVVIRHFDG--CKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~--~~~D~VlsD~~ 128 (179)
.++. ..+ ++||+|++|+.
T Consensus 138 -~~l~--~~~~~~~fD~V~~d~~ 157 (232)
T 3cbg_A 138 -EQLT--QGKPLPEFDLIFIDAD 157 (232)
T ss_dssp -HHHH--TSSSCCCEEEEEECSC
T ss_pred -HHHH--hcCCCCCcCEEEECCC
Confidence 1111 112 57999999975
No 241
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.12 E-value=8.1e-06 Score=69.79 Aligned_cols=53 Identities=25% Similarity=0.438 Sum_probs=44.2
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC----CCCCCeeEEeccccc
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----APIEGVIQVQGDITN 104 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~----~~~~~v~~i~gDi~~ 104 (179)
+.++.+|||||||+|.++..++++.+ ..+++++|+..+ ...++++++.+|+++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~ 257 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYP-------------SINAINFDLPHVIQDAPAFSGVEHLGGDMFD 257 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEECHHHHTTCCCCTTEEEEECCTTT
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCC-------------CCEEEEEehHHHHHhhhhcCCCEEEecCCCC
Confidence 45678999999999999999999876 578999999332 234689999999987
No 242
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.12 E-value=2.8e-06 Score=72.85 Aligned_cols=70 Identities=13% Similarity=0.243 Sum_probs=50.9
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhHHH
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~~~ 110 (179)
+.+|||||||+|.++..++.. ..+|+|+|+++.. .+.+++++.+|+.+... .
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~---------------~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~--~ 276 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN---------------FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQ--A 276 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG---------------SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHH--H
T ss_pred CCEEEEccCCCCHHHHHHHhc---------------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHH--H
Confidence 678999999999999998874 3689999999831 24689999999977421 1
Q ss_pred HHhh----------cCCCCccEEeeCCC
Q 030299 111 VIRH----------FDGCKADLVVCDGA 128 (179)
Q Consensus 111 l~~~----------~~~~~~D~VlsD~~ 128 (179)
+... +.+..||+|+.|.+
T Consensus 277 ~~~~~~~~~l~~~~~~~~~fD~Vv~dPP 304 (369)
T 3bt7_A 277 MNGVREFNRLQGIDLKSYQCETIFVDPP 304 (369)
T ss_dssp HSSCCCCTTGGGSCGGGCCEEEEEECCC
T ss_pred HhhccccccccccccccCCCCEEEECcC
Confidence 1100 00137999999954
No 243
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.11 E-value=8.4e-07 Score=70.87 Aligned_cols=71 Identities=13% Similarity=0.122 Sum_probs=50.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------CCCC-----------------
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEG----------------- 94 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~--------~~~~----------------- 94 (179)
.++.+|||||||+|.++..++... ...|+|+|+++.. ...+
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~--------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACES--------------FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEG 120 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGT--------------EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTT
T ss_pred cCCCEEEEECCCccHHHHHHhhcc--------------cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccc
Confidence 467899999999999999887652 1489999999831 1122
Q ss_pred ---------------e-eEEeccccchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 95 ---------------V-IQVQGDITNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 95 ---------------v-~~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
+ .++++|+.+.... .....+.||+|++...
T Consensus 121 ~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~----~~~~~~~fD~v~~~~~ 166 (265)
T 2i62_A 121 NRMKGPEKEEKLRRAIKQVLKCDVTQSQPL----GGVSLPPADCLLSTLC 166 (265)
T ss_dssp TCSCHHHHHHHHHHHEEEEEECCTTSSSTT----TTCCCCCEEEEEEESC
T ss_pred cccchHHHHHHhhhhheeEEEeeeccCCCC----CccccCCccEEEEhhh
Confidence 7 8899999886421 0012268999998653
No 244
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.11 E-value=1.2e-05 Score=68.00 Aligned_cols=71 Identities=23% Similarity=0.303 Sum_probs=53.4
Q ss_pred HHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CeeEEe
Q 030299 32 IDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQ 99 (179)
Q Consensus 32 id~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~-~v~~i~ 99 (179)
+.+.+. +.++.+|||+|||+|.++..++++.+ ..+++++|+ |.. ..+ +++++.
T Consensus 182 l~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~ 246 (359)
T 1x19_A 182 LLEEAK-LDGVKKMIDVGGGIGDISAAMLKHFP-------------ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIA 246 (359)
T ss_dssp HHHHCC-CTTCCEEEEESCTTCHHHHHHHHHCT-------------TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEE
T ss_pred HHHhcC-CCCCCEEEEECCcccHHHHHHHHHCC-------------CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEe
Confidence 334444 46788999999999999999999875 579999999 631 233 499999
Q ss_pred ccccchhhHHHHHhhcCCCCccEEeeCC
Q 030299 100 GDITNARTAEVVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 100 gDi~~~~~~~~l~~~~~~~~~D~VlsD~ 127 (179)
+|+++.+ ++ ..|+|++..
T Consensus 247 ~d~~~~~--------~~--~~D~v~~~~ 264 (359)
T 1x19_A 247 VDIYKES--------YP--EADAVLFCR 264 (359)
T ss_dssp CCTTTSC--------CC--CCSEEEEES
T ss_pred CccccCC--------CC--CCCEEEEec
Confidence 9998753 23 238888754
No 245
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.10 E-value=1.6e-06 Score=73.37 Aligned_cols=67 Identities=12% Similarity=0.070 Sum_probs=51.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~ 109 (179)
.++.+|||||||+|.++..++++.+ ..+|+++|+++.. ....+.++.+|+.+.
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~-------------~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~---- 257 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSP-------------KIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSE---- 257 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCT-------------TCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT----
T ss_pred CCCCeEEEecCccCHHHHHHHHHCC-------------CCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccccc----
Confidence 3567999999999999999998854 4699999999841 112356788888763
Q ss_pred HHHhhcCCCCccEEeeCCCC
Q 030299 110 VVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~~ 129 (179)
.+++||+|+++...
T Consensus 258 ------~~~~fD~Iv~~~~~ 271 (343)
T 2pjd_A 258 ------VKGRFDMIISNPPF 271 (343)
T ss_dssp ------CCSCEEEEEECCCC
T ss_pred ------ccCCeeEEEECCCc
Confidence 24589999998765
No 246
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.10 E-value=4.7e-06 Score=70.41 Aligned_cols=69 Identities=13% Similarity=0.128 Sum_probs=53.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CC------CCCeeEEeccccc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------AP------IEGVIQVQGDITN 104 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~~------~~~v~~i~gDi~~ 104 (179)
.++.+|||||||+|+.+..+++..+ ..+|+++|+++. .. .++++++.+|+.+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~-------------~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~ 173 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHES-------------VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFE 173 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTT-------------CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHH
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCC-------------CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHH
Confidence 4567999999999999999987643 579999999983 11 2578999999876
Q ss_pred hhhHHHHHhhcCCCCccEEeeCCC
Q 030299 105 ARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 105 ~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
... . .+++||+|++|..
T Consensus 174 ~l~------~-~~~~fD~Ii~d~~ 190 (314)
T 2b2c_A 174 FLK------N-HKNEFDVIITDSS 190 (314)
T ss_dssp HHH------H-CTTCEEEEEECCC
T ss_pred HHH------h-cCCCceEEEEcCC
Confidence 311 1 3468999999974
No 247
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.10 E-value=1.4e-05 Score=68.24 Aligned_cols=70 Identities=23% Similarity=0.310 Sum_probs=52.7
Q ss_pred HHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC----CCCCCeeEEeccccchhhHH
Q 030299 34 EEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----APIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 34 ~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~----~~~~~v~~i~gDi~~~~~~~ 109 (179)
+.+.-+.+..+|||||||+|.++..++++.+ ..+++++|+..+ ...++++++.+|+++ +
T Consensus 194 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~a~~~~~v~~~~~D~~~-~--- 256 (364)
T 3p9c_A 194 ELYHGFEGLGTLVDVGGGVGATVAAIAAHYP-------------TIKGVNFDLPHVISEAPQFPGVTHVGGDMFK-E--- 256 (364)
T ss_dssp HHCCTTTTCSEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEECHHHHTTCCCCTTEEEEECCTTT-C---
T ss_pred HhcccccCCCEEEEeCCCCCHHHHHHHHHCC-------------CCeEEEecCHHHHHhhhhcCCeEEEeCCcCC-C---
Confidence 3343246788999999999999999999876 578999999432 234689999999987 3
Q ss_pred HHHhhcCCCCccEEeeCC
Q 030299 110 VVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~ 127 (179)
++. . |+|++..
T Consensus 257 -----~p~-~-D~v~~~~ 267 (364)
T 3p9c_A 257 -----VPS-G-DTILMKW 267 (364)
T ss_dssp -----CCC-C-SEEEEES
T ss_pred -----CCC-C-CEEEehH
Confidence 233 2 8877643
No 248
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.10 E-value=1.1e-05 Score=66.45 Aligned_cols=88 Identities=19% Similarity=0.001 Sum_probs=55.4
Q ss_pred hhhhcHHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeC-CCCC------------
Q 030299 24 RSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDL-QPMA------------ 90 (179)
Q Consensus 24 Raa~KL~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~-~~~~------------ 90 (179)
+++..|.+......-+.++.+|||||||+|.++..++.. + ..+|+|+|+ ++..
T Consensus 62 ~~~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~-~-------------~~~v~~~D~s~~~~~~~a~~n~~~N~ 127 (281)
T 3bzb_A 62 SGARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLA-G-------------ADQVVATDYPDPEILNSLESNIREHT 127 (281)
T ss_dssp CHHHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHT-T-------------CSEEEEEECSCHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHc-C-------------CCEEEEEeCCCHHHHHHHHHHHHHhh
Confidence 345556655444332357889999999999999988775 3 258999999 6620
Q ss_pred -C---C-----CCeeEEeccccchhhHHHHHhhcCCCCccEEee-CC
Q 030299 91 -P---I-----EGVIQVQGDITNARTAEVVIRHFDGCKADLVVC-DG 127 (179)
Q Consensus 91 -~---~-----~~v~~i~gDi~~~~~~~~l~~~~~~~~~D~Vls-D~ 127 (179)
. + .++.++..|..+.. ..+...+.+.+||+|++ |.
T Consensus 128 ~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~fD~Ii~~dv 172 (281)
T 3bzb_A 128 ANSCSSETVKRASPKVVPYRWGDSP--DSLQRCTGLQRFQVVLLADL 172 (281)
T ss_dssp C----------CCCEEEECCTTSCT--HHHHHHHSCSSBSEEEEESC
T ss_pred hhhcccccCCCCCeEEEEecCCCcc--HHHHhhccCCCCCEEEEeCc
Confidence 1 1 25667766655421 11221123468999987 54
No 249
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.08 E-value=1.8e-06 Score=68.99 Aligned_cols=65 Identities=9% Similarity=-0.071 Sum_probs=47.6
Q ss_pred CCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CeeEEeccccch
Q 030299 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNA 105 (179)
Q Consensus 38 ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~-~v~~i~gDi~~~ 105 (179)
.+.+..+|||||||+|..+..++...+ ..+|+|+|+++-. ... ++.+ +|..+.
T Consensus 46 ~l~~~~~VLDlGCG~GplAl~l~~~~p-------------~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~ 110 (200)
T 3fzg_A 46 NIKHVSSILDFGCGFNPLALYQWNENE-------------KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD 110 (200)
T ss_dssp HSCCCSEEEEETCTTHHHHHHHHCSSC-------------CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH
T ss_pred hcCCCCeEEEecCCCCHHHHHHHhcCC-------------CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc
Confidence 467888999999999999999877654 5699999999831 123 3444 555432
Q ss_pred hhHHHHHhhcCCCCccEEeeC
Q 030299 106 RTAEVVIRHFDGCKADLVVCD 126 (179)
Q Consensus 106 ~~~~~l~~~~~~~~~D~VlsD 126 (179)
.+.++||+|++-
T Consensus 111 ---------~~~~~~DvVLa~ 122 (200)
T 3fzg_A 111 ---------VYKGTYDVVFLL 122 (200)
T ss_dssp ---------HTTSEEEEEEEE
T ss_pred ---------CCCCCcChhhHh
Confidence 245689999984
No 250
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.08 E-value=6e-06 Score=67.71 Aligned_cols=74 Identities=11% Similarity=0.015 Sum_probs=52.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------C---CCCCeeEEeccccchhhHHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------A---PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~------~---~~~~v~~i~gDi~~~~~~~~ 110 (179)
.++++|||+|||+|..|. +. +.+ ..+|+|+|+++. + ..++++++++|+.+.+..+.
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~-~~~-------------~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~ 84 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PV-GER-------------LDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGEL 84 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HH-HTT-------------CSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHH
T ss_pred CCcCEEEEECCCCcHHHH-hh-hCC-------------CCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHh
Confidence 678899999999999999 64 422 234999999982 1 12489999999998653221
Q ss_pred HHhhcCCCCccEEeeCCCCCC
Q 030299 111 VIRHFDGCKADLVVCDGAPDV 131 (179)
Q Consensus 111 l~~~~~~~~~D~VlsD~~~~~ 131 (179)
... + ...|.|+++.+.+.
T Consensus 85 ~~~--~-~~~~~vvsNlPY~i 102 (252)
T 1qyr_A 85 AEK--M-GQPLRVFGNLPYNI 102 (252)
T ss_dssp HHH--H-TSCEEEEEECCTTT
T ss_pred hcc--c-CCceEEEECCCCCc
Confidence 100 1 24689999887644
No 251
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.08 E-value=5.7e-06 Score=69.91 Aligned_cols=71 Identities=18% Similarity=0.153 Sum_probs=53.7
Q ss_pred HHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------C-CCCeeEEeccc
Q 030299 32 IDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P-IEGVIQVQGDI 102 (179)
Q Consensus 32 id~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~--------~-~~~v~~i~gDi 102 (179)
+.+.+. +.++.+|||||||+|.++..++++.+ ..+++++|+.++. . ..+++++.+|+
T Consensus 176 ~~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~ 241 (348)
T 3lst_A 176 LARAGD-FPATGTVADVGGGRGGFLLTVLREHP-------------GLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDF 241 (348)
T ss_dssp HHHHSC-CCSSEEEEEETCTTSHHHHHHHHHCT-------------TEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCT
T ss_pred HHHhCC-ccCCceEEEECCccCHHHHHHHHHCC-------------CCEEEEecCHHHhhcccccccCCCCCeEEEecCC
Confidence 344444 36788999999999999999999875 5789999986431 1 24699999999
Q ss_pred cchhhHHHHHhhcCCCCccEEeeCC
Q 030299 103 TNARTAEVVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 103 ~~~~~~~~l~~~~~~~~~D~VlsD~ 127 (179)
++. ++ +||+|++..
T Consensus 242 ~~~---------~p--~~D~v~~~~ 255 (348)
T 3lst_A 242 LRE---------VP--HADVHVLKR 255 (348)
T ss_dssp TTC---------CC--CCSEEEEES
T ss_pred CCC---------CC--CCcEEEEeh
Confidence 842 34 789988754
No 252
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.07 E-value=2.2e-05 Score=66.14 Aligned_cols=66 Identities=18% Similarity=0.332 Sum_probs=51.2
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCeeEEeccccchh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~-~~v~~i~gDi~~~~ 106 (179)
++++.+|||||||+|.++..++++.+ ...++++|+ +.. .+ .+++++.+|+++.
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~-------------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 245 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAP-------------HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEP- 245 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSC-
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCC-------------CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCC-
Confidence 36788999999999999999999865 579999998 521 12 3799999999863
Q ss_pred hHHHHHhhcCCCCccEEeeCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
++. .||+|++...
T Consensus 246 --------~~~-~~D~v~~~~v 258 (360)
T 1tw3_A 246 --------LPR-KADAIILSFV 258 (360)
T ss_dssp --------CSS-CEEEEEEESC
T ss_pred --------CCC-CccEEEEccc
Confidence 232 4999888553
No 253
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.04 E-value=3.9e-06 Score=70.97 Aligned_cols=72 Identities=11% Similarity=0.018 Sum_probs=53.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~ 108 (179)
.++.+|||+|||+|+++..++++++.. .+....|+|+|+++.. .. ++.++++|..+..
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~--------~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~~-- 197 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELK--------GDVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLANL-- 197 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTT--------SSCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSCC--
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHh--------cCCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCcc--
Confidence 457899999999999999999887520 0012689999999831 12 5788899987642
Q ss_pred HHHHhhcCCCCccEEeeCCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~~ 129 (179)
...+||+|+++.++
T Consensus 198 -------~~~~fD~Ii~NPPf 211 (344)
T 2f8l_A 198 -------LVDPVDVVISDLPV 211 (344)
T ss_dssp -------CCCCEEEEEEECCC
T ss_pred -------ccCCccEEEECCCC
Confidence 24689999999765
No 254
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.04 E-value=3.7e-07 Score=74.29 Aligned_cols=35 Identities=11% Similarity=0.149 Sum_probs=28.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCC
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP 88 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~ 88 (179)
.+|.+|||||||||.++..++... ...|+|+|+++
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~--------------~~~v~g~D~s~ 88 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDS--------------FQDITLSDFTD 88 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGT--------------EEEEEEEESCH
T ss_pred CCCceEEEeCCCccHHHHHHHHhh--------------hcceeeccccH
Confidence 568899999999998887766442 24799999997
No 255
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.04 E-value=3.3e-05 Score=64.34 Aligned_cols=69 Identities=17% Similarity=0.206 Sum_probs=52.6
Q ss_pred HHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCC-CC-----C------CCCeeEEec
Q 030299 33 DEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP-MA-----P------IEGVIQVQG 100 (179)
Q Consensus 33 d~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~-~~-----~------~~~v~~i~g 100 (179)
.+.+.+ .+ .+|||+|||+|.++..++++.+ ..+++++|+ | +. . ..+++++.+
T Consensus 161 ~~~~~~-~~-~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~ 224 (334)
T 2ip2_A 161 PRLLDF-RG-RSFVDVGGGSGELTKAILQAEP-------------SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGG 224 (334)
T ss_dssp HHHSCC-TT-CEEEEETCTTCHHHHHHHHHCT-------------TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEES
T ss_pred HHhCCC-CC-CEEEEeCCCchHHHHHHHHHCC-------------CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecC
Confidence 334443 45 8999999999999999999875 479999999 6 31 0 247999999
Q ss_pred cccchhhHHHHHhhcCCCCccEEeeCC
Q 030299 101 DITNARTAEVVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 101 Di~~~~~~~~l~~~~~~~~~D~VlsD~ 127 (179)
|+++. ++ .+||+|++..
T Consensus 225 d~~~~---------~~-~~~D~v~~~~ 241 (334)
T 2ip2_A 225 DMLQE---------VP-SNGDIYLLSR 241 (334)
T ss_dssp CTTTC---------CC-SSCSEEEEES
T ss_pred CCCCC---------CC-CCCCEEEEch
Confidence 99873 23 4799999754
No 256
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.04 E-value=5.2e-06 Score=70.31 Aligned_cols=66 Identities=21% Similarity=0.282 Sum_probs=51.5
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC----CCCCCeeEEeccccchhhHHHHHhh
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----APIEGVIQVQGDITNARTAEVVIRH 114 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~----~~~~~v~~i~gDi~~~~~~~~l~~~ 114 (179)
+.++.+|||||||+|.++..++++.+ ..+++++|+..+ ...++++++.+|+++ +
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~-------- 248 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIFP-------------HLKCTVFDQPQVVGNLTGNENLNFVGGDMFK-S-------- 248 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHCT-------------TSEEEEEECHHHHSSCCCCSSEEEEECCTTT-C--------
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHCC-------------CCeEEEeccHHHHhhcccCCCcEEEeCccCC-C--------
Confidence 35678999999999999999999875 578999999443 224689999999987 3
Q ss_pred cCCCCccEEeeCCC
Q 030299 115 FDGCKADLVVCDGA 128 (179)
Q Consensus 115 ~~~~~~D~VlsD~~ 128 (179)
++ .+|+|++...
T Consensus 249 ~~--~~D~v~~~~v 260 (358)
T 1zg3_A 249 IP--SADAVLLKWV 260 (358)
T ss_dssp CC--CCSEEEEESC
T ss_pred CC--CceEEEEccc
Confidence 23 4888887543
No 257
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.02 E-value=9.9e-06 Score=62.03 Aligned_cols=81 Identities=21% Similarity=0.154 Sum_probs=55.4
Q ss_pred hCCcchhhhcHHhHHHHh--CCCCCCCEEEEEccCCC-hHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCe
Q 030299 19 EGWRARSAFKLLQIDEEF--NIFEGVKRVVDLCAAPG-SWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGV 95 (179)
Q Consensus 19 ~~~~sRaa~KL~eid~~~--~ll~~g~~VlDLgagpG-g~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v 95 (179)
.|+..| ++|+.|-...| +-.+++.+|||||||+| .-+.+|++.. +..|+|+|++|....
T Consensus 12 ~~~~~~-~~~m~e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~--------------g~~V~atDInp~Av~--- 73 (153)
T 2k4m_A 12 SGLVPR-GSHMWNDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHS--------------KVDLVLTDIKPSHGG--- 73 (153)
T ss_dssp CCCCCC-CCHHHHHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHS--------------CCEEEEECSSCSSTT---
T ss_pred CCcccc-hhhHHHHHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhC--------------CCeEEEEECCccccc---
Confidence 344444 35665433333 11256779999999999 5999998754 368999999996532
Q ss_pred eEEeccccchhhHHHHHhhcCCCCccEEee
Q 030299 96 IQVQGDITNARTAEVVIRHFDGCKADLVVC 125 (179)
Q Consensus 96 ~~i~gDi~~~~~~~~l~~~~~~~~~D~Vls 125 (179)
+++.|++++... + -..+|+|-+
T Consensus 74 -~v~dDiF~P~~~--~-----Y~~~DLIYs 95 (153)
T 2k4m_A 74 -IVRDDITSPRME--I-----YRGAALIYS 95 (153)
T ss_dssp -EECCCSSSCCHH--H-----HTTEEEEEE
T ss_pred -eEEccCCCCccc--c-----cCCcCEEEE
Confidence 889999996521 1 137999944
No 258
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.02 E-value=5.4e-06 Score=71.84 Aligned_cols=67 Identities=13% Similarity=0.008 Sum_probs=52.2
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------------------------CCCC
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------------------------PIEG 94 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~--------------------------~~~~ 94 (179)
++.+|||+|||+|..+..++.+.+ ...|+++|+++.. .+.+
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~-------------~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~ 113 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP-------------AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKT 113 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS-------------CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSE
T ss_pred CCCEEEECCCchhHHHHHHHHhCC-------------CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCc
Confidence 688999999999999999999875 3689999999831 2234
Q ss_pred eeEEeccccchhhHHHHHhhcCCCCccEEeeCC
Q 030299 95 VIQVQGDITNARTAEVVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 95 v~~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~ 127 (179)
++++++|+.+... .. ...||+|+.|.
T Consensus 114 i~v~~~Da~~~~~------~~-~~~fD~I~lDP 139 (378)
T 2dul_A 114 IVINHDDANRLMA------ER-HRYFHFIDLDP 139 (378)
T ss_dssp EEEEESCHHHHHH------HS-TTCEEEEEECC
T ss_pred eEEEcCcHHHHHH------hc-cCCCCEEEeCC
Confidence 7888999877421 12 34799999985
No 259
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.02 E-value=1.6e-05 Score=67.82 Aligned_cols=70 Identities=17% Similarity=0.218 Sum_probs=53.8
Q ss_pred HHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-C----------C-CCCeeEEecc
Q 030299 34 EEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-A----------P-IEGVIQVQGD 101 (179)
Q Consensus 34 ~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-~----------~-~~~v~~i~gD 101 (179)
+.++ +.++.+|||+|||+|.++..++++.+ ..+++++|+ |. . . ..+++++.+|
T Consensus 196 ~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d 260 (369)
T 3gwz_A 196 AAYD-FSGAATAVDIGGGRGSLMAAVLDAFP-------------GLRGTLLER-PPVAEEARELLTGRGLADRCEILPGD 260 (369)
T ss_dssp HHSC-CTTCSEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred HhCC-CccCcEEEEeCCCccHHHHHHHHHCC-------------CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccC
Confidence 3443 36678999999999999999999865 579999999 62 0 1 2579999999
Q ss_pred ccchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 102 ITNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 102 i~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
+++. ++. +||+|++...
T Consensus 261 ~~~~---------~p~-~~D~v~~~~v 277 (369)
T 3gwz_A 261 FFET---------IPD-GADVYLIKHV 277 (369)
T ss_dssp TTTC---------CCS-SCSEEEEESC
T ss_pred CCCC---------CCC-CceEEEhhhh
Confidence 9843 344 7999988543
No 260
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.02 E-value=3.6e-06 Score=68.84 Aligned_cols=70 Identities=19% Similarity=0.166 Sum_probs=52.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------C-CCCCeeEEeccccchhhHHHHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------A-PIEGVIQVQGDITNARTAEVVI 112 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~------~-~~~~v~~i~gDi~~~~~~~~l~ 112 (179)
.++++|||+|||+|..|..++++ + ..+|+|+|+++. + +..+++++++|+.+.+..
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~-~-------------~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~---- 91 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQH-P-------------LKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFC---- 91 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTS-C-------------CSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGG----
T ss_pred CCcCEEEEEcCchHHHHHHHHHc-C-------------CCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChh----
Confidence 57889999999999999999876 2 369999999982 1 235789999999886531
Q ss_pred hhcCCCCccEEeeCCCCC
Q 030299 113 RHFDGCKADLVVCDGAPD 130 (179)
Q Consensus 113 ~~~~~~~~D~VlsD~~~~ 130 (179)
...+ . ..|+++.+.+
T Consensus 92 -~~~~-~-~~vv~NlPy~ 106 (249)
T 3ftd_A 92 -SLGK-E-LKVVGNLPYN 106 (249)
T ss_dssp -GSCS-S-EEEEEECCTT
T ss_pred -HccC-C-cEEEEECchh
Confidence 1111 3 3788887653
No 261
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.01 E-value=8.9e-06 Score=67.98 Aligned_cols=64 Identities=19% Similarity=0.089 Sum_probs=51.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCC-CC----------C-CCCeeEEeccccchhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP-MA----------P-IEGVIQVQGDITNART 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~-~~----------~-~~~v~~i~gDi~~~~~ 107 (179)
.++.+|||+|||+|.++..++++.+ ..+++++|+ | +. . ..+++++.+|+++.
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 231 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHE-------------DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDP-- 231 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCT-------------TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC--
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCC-------------CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCC--
Confidence 4568999999999999999999876 579999999 6 20 1 25799999999853
Q ss_pred HHHHHhhcCCCCccEEeeCC
Q 030299 108 AEVVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~ 127 (179)
++. +||+|++..
T Consensus 232 -------~p~-~~D~v~~~~ 243 (332)
T 3i53_A 232 -------LPA-GAGGYVLSA 243 (332)
T ss_dssp -------CCC-SCSEEEEES
T ss_pred -------CCC-CCcEEEEeh
Confidence 343 799999854
No 262
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.01 E-value=3.8e-06 Score=73.28 Aligned_cols=69 Identities=19% Similarity=0.044 Sum_probs=53.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCC--eeEEeccccchh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEG--VIQVQGDITNAR 106 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~--v~~i~gDi~~~~ 106 (179)
++|.+|||++||+|+++..++.+.+. ..+|+++|+++.. .+.+ ++++++|+++..
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~g------------a~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l 118 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSC------------VEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFL 118 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSC------------EEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHH
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCC------------CCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHH
Confidence 46889999999999999999987531 2689999999841 2444 889999987642
Q ss_pred hHHHHHh-hcCCCCccEEeeCC
Q 030299 107 TAEVVIR-HFDGCKADLVVCDG 127 (179)
Q Consensus 107 ~~~~l~~-~~~~~~~D~VlsD~ 127 (179)
. .+ ...||+|+.|.
T Consensus 119 ------~~~~-~~~fD~V~lDP 133 (392)
T 3axs_A 119 ------RKEW-GFGFDYVDLDP 133 (392)
T ss_dssp ------HSCC-SSCEEEEEECC
T ss_pred ------HHhh-CCCCcEEEECC
Confidence 1 12 35799999997
No 263
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.99 E-value=7.6e-06 Score=68.12 Aligned_cols=108 Identities=12% Similarity=0.000 Sum_probs=70.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------C-CCCeeEEeccccchhhHHHHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P-IEGVIQVQGDITNARTAEVVI 112 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~-~~~v~~i~gDi~~~~~~~~l~ 112 (179)
.++++|||||||+|..|..++++.+. ..++|+|+|+++.. . ..+++++++|+.+.+..+
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~-----------~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~~--- 106 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLAT-----------PGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFGS--- 106 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCB-----------TTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGGG---
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCC-----------cCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChhH---
Confidence 67899999999999999999998641 01459999999831 1 358999999999875321
Q ss_pred hhcCCC--CccEEeeCCCCCCCCCCcccHHHHHHHHHHHHHHH-----------------H-------HHHHHHHHHHhh
Q 030299 113 RHFDGC--KADLVVCDGAPDVTGLHDMDEFVQSQLILAVSIQF-----------------F-------IYELVFCLRQLL 166 (179)
Q Consensus 113 ~~~~~~--~~D~VlsD~~~~~~g~~~~d~~~q~~L~~~AL~~~-----------------~-------~~~~~~~~~~~f 166 (179)
.+... ....|+++.+ ...+..++...|... + .++.+.++-|.|
T Consensus 107 -~~~~~~~~~~~vv~NlP----------Y~iss~il~~ll~~~~~~~~~~~m~QkEva~Rl~A~pg~k~yg~lSv~~q~~ 175 (279)
T 3uzu_A 107 -IARPGDEPSLRIIGNLP----------YNISSPLLFHLMSFAPVVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYR 175 (279)
T ss_dssp -GSCSSSSCCEEEEEECC----------HHHHHHHHHHHGGGGGGEEEEEEEEEHHHHHHHTCCTTSTTCCHHHHHHHHH
T ss_pred -hcccccCCceEEEEccC----------ccccHHHHHHHHhccCCccEEEEEeeHHHHHHHhCCCCCCcccHHHHHHhhh
Confidence 11111 2456777654 344555554444321 1 145666777777
Q ss_pred ceEEEe
Q 030299 167 QYVILD 172 (179)
Q Consensus 167 ~~v~~~ 172 (179)
-.|++.
T Consensus 176 ~~~~~~ 181 (279)
T 3uzu_A 176 YVMDKL 181 (279)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 777654
No 264
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=97.98 E-value=8.4e-06 Score=69.39 Aligned_cols=67 Identities=16% Similarity=0.187 Sum_probs=52.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CC-CCeeEEeccccchh-h
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNAR-T 107 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~-~~v~~i~gDi~~~~-~ 107 (179)
.+..+|||||||+|.++..++++.+ ..+++++|+..+. .. .+++++.+|+++.+ +
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p-------------~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 244 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNK-------------EVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVP 244 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHST-------------TCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC-------------CCEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCC
Confidence 4567999999999999999999875 5799999983221 11 46999999999852 1
Q ss_pred HHHHHhhcCCCCccEEeeCC
Q 030299 108 AEVVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~ 127 (179)
++ .+||+|++..
T Consensus 245 -------~p-~~~D~v~~~~ 256 (363)
T 3dp7_A 245 -------FP-TGFDAVWMSQ 256 (363)
T ss_dssp -------CC-CCCSEEEEES
T ss_pred -------CC-CCcCEEEEec
Confidence 23 5799999854
No 265
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.95 E-value=5.2e-06 Score=68.55 Aligned_cols=69 Identities=20% Similarity=0.183 Sum_probs=53.1
Q ss_pred CCC--CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------C------C----C-CCeeE
Q 030299 40 EGV--KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------A------P----I-EGVIQ 97 (179)
Q Consensus 40 ~~g--~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~------~----~-~~v~~ 97 (179)
+++ .+|||++||.|..+.+++.+ + ++|+++|+++. + . + .++++
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~-g--------------~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~ 149 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASV-G--------------CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQL 149 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHH-T--------------CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEE
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHc-C--------------CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEE
Confidence 566 89999999999999999997 3 57999999992 1 0 2 45889
Q ss_pred EeccccchhhHHHHHhhcCCCCccEEeeCCCCC
Q 030299 98 VQGDITNARTAEVVIRHFDGCKADLVVCDGAPD 130 (179)
Q Consensus 98 i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~~ 130 (179)
+++|..+.. +.+++ .||+|+.|.+..
T Consensus 150 ~~~D~~~~L------~~~~~-~fDvV~lDP~y~ 175 (258)
T 2oyr_A 150 IHASSLTAL------TDITP-RPQVVYLDPMFP 175 (258)
T ss_dssp EESCHHHHS------TTCSS-CCSEEEECCCCC
T ss_pred EECCHHHHH------HhCcc-cCCEEEEcCCCC
Confidence 999987742 12333 699999997653
No 266
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.89 E-value=3.6e-06 Score=68.90 Aligned_cols=34 Identities=12% Similarity=0.209 Sum_probs=26.6
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCC
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP 88 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~ 88 (179)
++.+|||||||+|.++..++.. + ...|+|+|+++
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~-~-------------~~~v~gvD~s~ 104 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS-H-------------FEDITMTDFLE 104 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG-G-------------CSEEEEECSCH
T ss_pred CCCeEEEECCCcChHHHHhhcc-C-------------CCeEEEeCCCH
Confidence 6789999999999955444332 2 36999999998
No 267
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=97.85 E-value=3e-05 Score=67.13 Aligned_cols=81 Identities=11% Similarity=0.012 Sum_probs=55.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCC----CCCCCC---------------------CCCCCCeEEEEeCCCCC----
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPA----KLSPDS---------------------REGDLPLIVAIDLQPMA---- 90 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~----~~~~~~---------------------~~~~~~~VvavD~~~~~---- 90 (179)
.++.+|||+|||+|.++..++......+ +.++-. +......|+|+|+++..
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 5788999999999999999988753210 001100 01123679999999831
Q ss_pred -------CCC-CeeEEeccccchhhHHHHHhhcCCCCccEEeeCCCC
Q 030299 91 -------PIE-GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 91 -------~~~-~v~~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
.+. .+++.++|+.+.. ...++|+|++|.+.
T Consensus 274 r~Na~~~gl~~~i~~~~~D~~~l~---------~~~~~D~Iv~NPPy 311 (385)
T 3ldu_A 274 RENAEIAGVDEYIEFNVGDATQFK---------SEDEFGFIITNPPY 311 (385)
T ss_dssp HHHHHHHTCGGGEEEEECCGGGCC---------CSCBSCEEEECCCC
T ss_pred HHHHHHcCCCCceEEEECChhhcC---------cCCCCcEEEECCCC
Confidence 232 5889999999864 23589999999763
No 268
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=97.84 E-value=2.9e-05 Score=65.20 Aligned_cols=84 Identities=6% Similarity=0.028 Sum_probs=63.8
Q ss_pred CCeEEEEeCCC---------CCCCCCeeEE-eccccchhhHHHHHhhcCCCCccEEeeCCCCCCCCCC-c--ccHHHHHH
Q 030299 78 LPLIVAIDLQP---------MAPIEGVIQV-QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLH-D--MDEFVQSQ 144 (179)
Q Consensus 78 ~~~VvavD~~~---------~~~~~~v~~i-~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~~~~g~~-~--~d~~~q~~ 144 (179)
+..|+-||..- |.|++|+.++ ++|++++++. +++|+|+|||+|+.+|++ . .||...+.
T Consensus 164 g~~vl~v~~~~~~p~k~v~wi~Pi~GAt~~~~lDfg~p~~~---------~k~DvV~SDMApn~sGh~yqQC~DHarii~ 234 (320)
T 2hwk_A 164 GRTVLVVGEKLSVPGKMVDWLSDRPEATFRARLDLGIPGDV---------PKYDIIFVNVRTPYKYHHYQQCEDHAIKLS 234 (320)
T ss_dssp CSEEEEEESCCCCTTSEEEEEESSTTCSEECCGGGCSCTTS---------CCEEEEEEECCCCCCSCHHHHHHHHHHHHH
T ss_pred CcEEEEEecccccCCceeEeeccCCCceeecccccCCcccc---------CcCCEEEEcCCCCCCCccccccchHHHHHH
Confidence 35666665221 2468899999 9999998642 579999999999999999 7 78888777
Q ss_pred HHHHHHHHHH--------------------HHHHHHHHHHhhceEEEee
Q 030299 145 LILAVSIQFF--------------------IYELVFCLRQLLQYVILDG 173 (179)
Q Consensus 145 L~~~AL~~~~--------------------~~~~~~~~~~~f~~v~~~~ 173 (179)
| ++..++ .-.++=.|.|-|++|.+++
T Consensus 235 L---al~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~F~~Vr~vK 280 (320)
T 2hwk_A 235 M---LTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQFKFSRVCK 280 (320)
T ss_dssp H---THHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEEC
T ss_pred H---HHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHhcceeeeeC
Confidence 7 555442 2457788899999998764
No 269
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.83 E-value=3.6e-06 Score=72.55 Aligned_cols=71 Identities=10% Similarity=0.020 Sum_probs=46.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCeeEEeccccchhhHHHHHhhc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHF 115 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----~~~~v~~i~gDi~~~~~~~~l~~~~ 115 (179)
+++.+|||+|||+|.++..++++ ...|+|+|+++.. .-.++......+.. .....+. +
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~---------------g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~-~~~~~l~--~ 167 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEA---------------GVRHLGFEPSSGVAAKAREKGIRVRTDFFEK-ATADDVR--R 167 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHT---------------TCEEEEECCCHHHHHHHHTTTCCEECSCCSH-HHHHHHH--H
T ss_pred CCCCEEEEecCCCCHHHHHHHHc---------------CCcEEEECCCHHHHHHHHHcCCCcceeeech-hhHhhcc--c
Confidence 67889999999999999999875 2689999999831 11133333222211 1111111 2
Q ss_pred CCCCccEEeeCCC
Q 030299 116 DGCKADLVVCDGA 128 (179)
Q Consensus 116 ~~~~~D~VlsD~~ 128 (179)
++++||+|++...
T Consensus 168 ~~~~fD~I~~~~v 180 (416)
T 4e2x_A 168 TEGPANVIYAANT 180 (416)
T ss_dssp HHCCEEEEEEESC
T ss_pred CCCCEEEEEECCh
Confidence 3468999999765
No 270
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=97.82 E-value=2.9e-05 Score=67.50 Aligned_cols=81 Identities=12% Similarity=-0.041 Sum_probs=55.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCC----CCCC---------------------CCCCCCCeEEEEeCCCC-----
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAK----LSPD---------------------SREGDLPLIVAIDLQPM----- 89 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~----~~~~---------------------~~~~~~~~VvavD~~~~----- 89 (179)
+++..|||.+||+|.++..++......+. .++- .+......|+|+|+++.
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 57889999999999999998876532100 0110 00122357999999983
Q ss_pred ------CCCC-CeeEEeccccchhhHHHHHhhcCCCCccEEeeCCCC
Q 030299 90 ------APIE-GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 90 ------~~~~-~v~~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
..+. .++++++|+.+... ...||+|++|.+.
T Consensus 280 r~Na~~~gl~~~I~~~~~D~~~~~~---------~~~fD~Iv~NPPY 317 (393)
T 3k0b_A 280 KQNAVEAGLGDLITFRQLQVADFQT---------EDEYGVVVANPPY 317 (393)
T ss_dssp HHHHHHTTCTTCSEEEECCGGGCCC---------CCCSCEEEECCCC
T ss_pred HHHHHHcCCCCceEEEECChHhCCC---------CCCCCEEEECCCC
Confidence 1233 48899999998642 3489999999763
No 271
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.81 E-value=4.3e-05 Score=65.62 Aligned_cols=87 Identities=20% Similarity=0.116 Sum_probs=63.7
Q ss_pred HHhHHHHhCCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----C--CCCeeEEecc
Q 030299 29 LLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----P--IEGVIQVQGD 101 (179)
Q Consensus 29 L~eid~~~~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----~--~~~v~~i~gD 101 (179)
|.|+.+-+.+ +||..++|..+|.||.|..+++++++ .++|+|+|..|.. . ..++++++++
T Consensus 46 l~Evl~~L~i-~pggiyVD~TlG~GGHS~~iL~~lg~------------~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~n 112 (347)
T 3tka_A 46 LDEAVNGLNI-RPDGIYIDGTFGRGGHSRLILSQLGE------------EGRLLAIDRDPQAIAVAKTIDDPRFSIIHGP 112 (347)
T ss_dssp THHHHHHTCC-CTTCEEEESCCTTSHHHHHHHTTCCT------------TCEEEEEESCHHHHHHHTTCCCTTEEEEESC
T ss_pred HHHHHHhhCC-CCCCEEEEeCcCCCHHHHHHHHhCCC------------CCEEEEEECCHHHHHHHHhhcCCcEEEEeCC
Confidence 3444444443 78999999999999999999999864 6899999999831 1 2578899999
Q ss_pred ccchhhHHHHHhhcC-CCCccEEeeCCCCCC
Q 030299 102 ITNARTAEVVIRHFD-GCKADLVVCDGAPDV 131 (179)
Q Consensus 102 i~~~~~~~~l~~~~~-~~~~D~VlsD~~~~~ 131 (179)
..+... +..... .+++|.|+.|...+.
T Consensus 113 F~~l~~---~L~~~g~~~~vDgILfDLGVSS 140 (347)
T 3tka_A 113 FSALGE---YVAERDLIGKIDGILLDLGVSS 140 (347)
T ss_dssp GGGHHH---HHHHTTCTTCEEEEEEECSCCH
T ss_pred HHHHHH---HHHhcCCCCcccEEEECCccCH
Confidence 988642 222222 136999999986543
No 272
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.79 E-value=6.2e-05 Score=65.13 Aligned_cols=70 Identities=14% Similarity=0.149 Sum_probs=51.8
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------C------C-----CCeeEEecc
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P------I-----EGVIQVQGD 101 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~--------~------~-----~~v~~i~gD 101 (179)
++.+|||||||.|+.+..++... ..+|++||+++.. + + ++++++.+|
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~--------------~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~D 253 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK--------------PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIED 253 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC--------------CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESC
T ss_pred CCCEEEEEECChhHHHHHHHHCC--------------CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECc
Confidence 46899999999999999987752 2689999999830 1 1 268899999
Q ss_pred ccchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 102 ITNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 102 i~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
..+.- ++..+ .+++||+|++|..
T Consensus 254 a~~~L--~~~~~--~~~~fDvII~D~~ 276 (364)
T 2qfm_A 254 CIPVL--KRYAK--EGREFDYVINDLT 276 (364)
T ss_dssp HHHHH--HHHHH--HTCCEEEEEEECC
T ss_pred HHHHH--Hhhhc--cCCCceEEEECCC
Confidence 88742 11110 2468999999975
No 273
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.77 E-value=9.1e-06 Score=63.74 Aligned_cols=61 Identities=15% Similarity=0.204 Sum_probs=46.7
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCeeEEeccccchhhHHHHHhhcC
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFD 116 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----~~~~v~~i~gDi~~~~~~~~l~~~~~ 116 (179)
++.+|||||||+|.++..++. . +|+|+++.. ...++.++++|+.+.+ ++
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~-----------------~--~~vD~s~~~~~~a~~~~~~~~~~d~~~~~--------~~ 99 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKI-----------------K--IGVEPSERMAEIARKRGVFVLKGTAENLP--------LK 99 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTC-----------------C--EEEESCHHHHHHHHHTTCEEEECBTTBCC--------SC
T ss_pred CCCcEEEeCCCCCHHHHHHHH-----------------H--hccCCCHHHHHHHHhcCCEEEEcccccCC--------CC
Confidence 488999999999999887631 2 999999831 1127889999998754 34
Q ss_pred CCCccEEeeCCC
Q 030299 117 GCKADLVVCDGA 128 (179)
Q Consensus 117 ~~~~D~VlsD~~ 128 (179)
++.||+|++...
T Consensus 100 ~~~fD~v~~~~~ 111 (219)
T 1vlm_A 100 DESFDFALMVTT 111 (219)
T ss_dssp TTCEEEEEEESC
T ss_pred CCCeeEEEEcch
Confidence 568999999764
No 274
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.73 E-value=5.2e-05 Score=65.75 Aligned_cols=81 Identities=14% Similarity=-0.058 Sum_probs=55.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCC----CCCCC---------------------CCCCCCeEEEEeCCCCC----
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAK----LSPDS---------------------REGDLPLIVAIDLQPMA---- 90 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~----~~~~~---------------------~~~~~~~VvavD~~~~~---- 90 (179)
+++..|+|.+||+|.+...++......+. .++-. +......|+|+|+++..
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 67889999999999999988876532110 01100 01123579999999831
Q ss_pred -------CCC-CeeEEeccccchhhHHHHHhhcCCCCccEEeeCCCC
Q 030299 91 -------PIE-GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 91 -------~~~-~v~~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
.+. .++++++|+++... ...||+|++|.+.
T Consensus 273 r~Na~~~gl~~~I~~~~~D~~~l~~---------~~~fD~Iv~NPPY 310 (384)
T 3ldg_A 273 RKNAREVGLEDVVKLKQMRLQDFKT---------NKINGVLISNPPY 310 (384)
T ss_dssp HHHHHHTTCTTTEEEEECCGGGCCC---------CCCSCEEEECCCC
T ss_pred HHHHHHcCCCCceEEEECChHHCCc---------cCCcCEEEECCch
Confidence 233 48899999998642 2479999999764
No 275
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=97.71 E-value=3.2e-05 Score=67.83 Aligned_cols=82 Identities=12% Similarity=0.043 Sum_probs=53.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCC-CCCCCCCeEEEEeCCCC-----------CCCC--CeeEEeccccch
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPD-SREGDLPLIVAIDLQPM-----------APIE--GVIQVQGDITNA 105 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~-~~~~~~~~VvavD~~~~-----------~~~~--~v~~i~gDi~~~ 105 (179)
.++.+|+|.|||+|+++..+++.+.... .... .+......++|+|+++. ..+. ++.+.++|....
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~-~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~ 248 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQS-ASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEK 248 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC--CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTS
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhc-CCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCC
Confidence 4678999999999999999988752100 0000 00001357999999983 1222 567889998775
Q ss_pred hhHHHHHhhcCCCCccEEeeCCCCCC
Q 030299 106 RTAEVVIRHFDGCKADLVVCDGAPDV 131 (179)
Q Consensus 106 ~~~~~l~~~~~~~~~D~VlsD~~~~~ 131 (179)
+ ...+||+|+++.+...
T Consensus 249 ~---------~~~~fD~Iv~NPPf~~ 265 (445)
T 2okc_A 249 E---------PSTLVDVILANPPFGT 265 (445)
T ss_dssp C---------CSSCEEEEEECCCSSC
T ss_pred c---------ccCCcCEEEECCCCCC
Confidence 3 1248999999976544
No 276
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=97.69 E-value=5.3e-05 Score=62.23 Aligned_cols=62 Identities=15% Similarity=0.078 Sum_probs=48.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------C--C-------CCCeeEEeccccc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------A--P-------IEGVIQVQGDITN 104 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~------~--~-------~~~v~~i~gDi~~ 104 (179)
.++.+|||||||.|+.+..+++. + .+|+++|+++. + + .++++++.+|..+
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~--------------~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~ 135 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D--------------THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDL 135 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S--------------CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGS
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C--------------CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHH
Confidence 35679999999999999988765 3 58999999972 1 1 2468888888876
Q ss_pred hhhHHHHHhhcCCCCccEEeeCC
Q 030299 105 ARTAEVVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 105 ~~~~~~l~~~~~~~~~D~VlsD~ 127 (179)
. . ++||+|++|.
T Consensus 136 ~----------~-~~fD~Ii~d~ 147 (262)
T 2cmg_A 136 D----------I-KKYDLIFCLQ 147 (262)
T ss_dssp C----------C-CCEEEEEESS
T ss_pred H----------H-hhCCEEEECC
Confidence 3 1 5799999995
No 277
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.63 E-value=0.00014 Score=60.65 Aligned_cols=53 Identities=13% Similarity=0.260 Sum_probs=39.0
Q ss_pred CCEEEEEccCC--ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC----C-------CCCCeeEEeccccchh
Q 030299 42 VKRVVDLCAAP--GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----A-------PIEGVIQVQGDITNAR 106 (179)
Q Consensus 42 g~~VlDLgagp--Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~----~-------~~~~v~~i~gDi~~~~ 106 (179)
..+|||||||+ ++.+..++++..+ ..+|+++|.+|. . +..++.++++|+++++
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P------------~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~ 144 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAP------------ESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPA 144 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCT------------TCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHH
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCC------------CCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChh
Confidence 37899999997 4555555555432 689999999993 1 1235899999999974
No 278
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.60 E-value=7.3e-05 Score=62.03 Aligned_cols=39 Identities=23% Similarity=0.213 Sum_probs=28.5
Q ss_pred CCCEEEEEccCCCh----HHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCC
Q 030299 41 GVKRVVDLCAAPGS----WSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP 88 (179)
Q Consensus 41 ~g~~VlDLgagpGg----~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~ 88 (179)
++.+|+|+|||+|- .+..+++..+.. ....+|+|+|+++
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~---------~~~~~I~atDis~ 147 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMA---------PGRWKVFASDIDT 147 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSC---------TTSEEEEEEESCH
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccC---------CCCeEEEEEECCH
Confidence 45699999999998 556677765420 0025899999998
No 279
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.57 E-value=9.9e-05 Score=65.15 Aligned_cols=71 Identities=8% Similarity=0.012 Sum_probs=51.9
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------------C------C--CCCeeEE
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------------A------P--IEGVIQV 98 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~------------~------~--~~~v~~i 98 (179)
+.++.+|||||||+|..+..++++.+ ...|+|+|+++. + . ..+++++
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g-------------~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i 306 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECG-------------CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFS 306 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC-------------CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEE
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCC-------------CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEE
Confidence 36889999999999999999999876 368999999983 1 1 3578888
Q ss_pred ecccc-chhhHHHHHhhcCCCCccEEeeCC
Q 030299 99 QGDIT-NARTAEVVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 99 ~gDi~-~~~~~~~l~~~~~~~~~D~VlsD~ 127 (179)
++|.. +...... ....||+|+++.
T Consensus 307 ~gD~~~~~~~~~~-----~~~~FDvIvvn~ 331 (433)
T 1u2z_A 307 LKKSFVDNNRVAE-----LIPQCDVILVNN 331 (433)
T ss_dssp ESSCSTTCHHHHH-----HGGGCSEEEECC
T ss_pred EcCcccccccccc-----ccCCCCEEEEeC
Confidence 88654 3211100 124799999864
No 280
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.56 E-value=0.00013 Score=60.21 Aligned_cols=63 Identities=14% Similarity=0.050 Sum_probs=48.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~ 109 (179)
.++.+|||||||.|-++..+. + ...++|+|+++-. ......+..+|....+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~-------------~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~--- 164 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---G-------------IASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAP--- 164 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---T-------------CSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSC---
T ss_pred CCCCeEEEecCCccHHHHHhc---c-------------CCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCC---
Confidence 567899999999999998876 4 5899999999831 1245667788888754
Q ss_pred HHHhhcCCCCccEEeeCC
Q 030299 110 VVIRHFDGCKADLVVCDG 127 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~ 127 (179)
+..++|+|++..
T Consensus 165 ------~~~~~DvvLllk 176 (253)
T 3frh_A 165 ------PAEAGDLALIFK 176 (253)
T ss_dssp ------CCCBCSEEEEES
T ss_pred ------CCCCcchHHHHH
Confidence 235899998753
No 281
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.55 E-value=0.00012 Score=66.05 Aligned_cols=85 Identities=16% Similarity=0.053 Sum_probs=54.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCC-----CCCCCeEEEEeCCCC-----------CCCCC-----eeEE
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSR-----EGDLPLIVAIDLQPM-----------APIEG-----VIQV 98 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~-----~~~~~~VvavD~~~~-----------~~~~~-----v~~i 98 (179)
.++.+|+|.|||+|++...+++.+.......+... .-....++|+|+++. ....+ +.+.
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeE
Confidence 46789999999999999999887642100000000 000247999999983 12333 6678
Q ss_pred eccccchhhHHHHHhhcCCCCccEEeeCCCCCC
Q 030299 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAPDV 131 (179)
Q Consensus 99 ~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~~~ 131 (179)
++|....+. ....+||+|+++.++..
T Consensus 248 ~gDtL~~~~-------~~~~~fD~Vv~NPPf~~ 273 (541)
T 2ar0_A 248 LGNTLGSDG-------ENLPKAHIVATNPPFGS 273 (541)
T ss_dssp ESCTTSHHH-------HTSCCEEEEEECCCCTT
T ss_pred eCCCccccc-------ccccCCeEEEECCCccc
Confidence 898876432 13457999999976544
No 282
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=97.53 E-value=0.00011 Score=62.48 Aligned_cols=64 Identities=17% Similarity=0.130 Sum_probs=49.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~ 109 (179)
.+..+|+|||||+|.++..++++.+ ..+++..|+.++. ..++|+++.+|+++.+
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p-------------~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~~--- 241 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYP-------------GCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDP--- 241 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCS-------------SCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTSC---
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCC-------------CceeEeccCHHHHHHHHHhhhhcccCceeeecCccccCC---
Confidence 5678999999999999999999986 5788989974431 2368999999998643
Q ss_pred HHHhhcCCCCccEEeeC
Q 030299 110 VVIRHFDGCKADLVVCD 126 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD 126 (179)
. ..+|+|+.-
T Consensus 242 -----~--~~~D~~~~~ 251 (353)
T 4a6d_A 242 -----L--PEADLYILA 251 (353)
T ss_dssp -----C--CCCSEEEEE
T ss_pred -----C--CCceEEEee
Confidence 1 246777764
No 283
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.42 E-value=4.8e-05 Score=63.53 Aligned_cols=69 Identities=12% Similarity=-0.023 Sum_probs=51.6
Q ss_pred CCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhh
Q 030299 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNART 107 (179)
Q Consensus 38 ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~ 107 (179)
.+.+..+|||||||.|-++..+....+ ...|+|+|+++-. .-.+..+...|....+
T Consensus 129 ~i~~p~~VLDLGCG~GpLAl~~~~~~p-------------~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~- 194 (281)
T 3lcv_B 129 HLPRPNTLRDLACGLNPLAAPWMGLPA-------------ETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR- 194 (281)
T ss_dssp GSCCCSEEEETTCTTGGGCCTTTTCCT-------------TCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-
T ss_pred ccCCCceeeeeccCccHHHHHHHhhCC-------------CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC-
Confidence 556678999999999999998876543 6899999999831 1123566777777653
Q ss_pred HHHHHhhcCCCCccEEeeCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~ 128 (179)
+..++|++|+...
T Consensus 195 --------p~~~~DvaL~lkt 207 (281)
T 3lcv_B 195 --------LDEPADVTLLLKT 207 (281)
T ss_dssp --------CCSCCSEEEETTC
T ss_pred --------CCCCcchHHHHHH
Confidence 4568999988653
No 284
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.24 E-value=0.00022 Score=65.77 Aligned_cols=69 Identities=22% Similarity=0.158 Sum_probs=49.5
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----------C-CCeeEEeccccchhhHHH
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------I-EGVIQVQGDITNARTAEV 110 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~----------~-~~v~~i~gDi~~~~~~~~ 110 (179)
+..|||+|||+|-.+...++..... ....+|+||+-+||.. . ..|++++||+++.+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~---------~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~---- 424 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQA---------DRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWV---- 424 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHT---------TCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCC----
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhc---------CCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceecc----
Confidence 4579999999999965554432100 0124799999999731 1 35899999999986
Q ss_pred HHhhcCCCCccEEeeCCC
Q 030299 111 VIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 111 l~~~~~~~~~D~VlsD~~ 128 (179)
++ +++|+|+|-..
T Consensus 425 ----LP-EKVDIIVSEwM 437 (637)
T 4gqb_A 425 ----AP-EKADIIVSELL 437 (637)
T ss_dssp ----CS-SCEEEEECCCC
T ss_pred ----CC-cccCEEEEEcC
Confidence 34 58999999764
No 285
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.17 E-value=0.00056 Score=61.84 Aligned_cols=76 Identities=12% Similarity=0.003 Sum_probs=55.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCC--CCeeEEeccccchh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------API--EGVIQVQGDITNAR 106 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~~~--~~v~~i~gDi~~~~ 106 (179)
.++.+|+|.|||+|++...+++++.. .....++|+|+++. ..+ .++.+.++|....+
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~----------~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d 289 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQ----------PQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDED 289 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSC----------TTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSC
T ss_pred CCCCEEeecccchhHHHHHHHHHHHh----------ccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccc
Confidence 46789999999999999999888631 12468999999983 122 35677899987642
Q ss_pred hHHHHHhhcCCCCccEEeeCCCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGAPD 130 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~~~ 130 (179)
.. .....+||+|+++.+..
T Consensus 290 ~p-----~~~~~~fD~IvaNPPf~ 308 (542)
T 3lkd_A 290 WP-----TQEPTNFDGVLMNPPYS 308 (542)
T ss_dssp SC-----CSSCCCBSEEEECCCTT
T ss_pred cc-----ccccccccEEEecCCcC
Confidence 00 12346899999997765
No 286
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.10 E-value=0.0002 Score=66.89 Aligned_cols=84 Identities=11% Similarity=0.042 Sum_probs=50.6
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CC-CCeeEEeccccchhhHHH
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNARTAEV 110 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~-~~v~~i~gDi~~~~~~~~ 110 (179)
+..|||+|||+|..+..++.........+-+.+.-...+|+|||.+|+. .. ..|+++++|+++.+....
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 3579999999999986543322100000000000013599999999852 12 349999999999863210
Q ss_pred HHhhcCCCCccEEeeCCC
Q 030299 111 VIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 111 l~~~~~~~~~D~VlsD~~ 128 (179)
.. ..+++|+|+|-..
T Consensus 490 --~~-~~ekVDIIVSElm 504 (745)
T 3ua3_A 490 --DR-GFEQPDIIVSELL 504 (745)
T ss_dssp --HT-TCCCCSEEEECCC
T ss_pred --cC-CCCcccEEEEecc
Confidence 11 1368999999875
No 287
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.97 E-value=0.0013 Score=56.81 Aligned_cols=72 Identities=17% Similarity=0.207 Sum_probs=52.7
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCeeEEeccccchhhHHHHHhh-c
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRH-F 115 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~~~v~~i~gDi~~~~~~~~l~~~-~ 115 (179)
.+|+||.||.||++.-+.+. + --.|.|+|+.+.. ..++..++.+||++.... ++... +
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G-------------~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~-~~~~~~~ 67 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-G-------------FDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAE-IIKGFFK 67 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-T-------------CEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHH-HHHHHHC
T ss_pred CeEEEEccCcCHHHHHHHHC-C-------------CcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHH-HHHhhcc
Confidence 47999999999999998775 3 2357799999852 356788899999987532 23221 2
Q ss_pred CCCCccEEeeCCCC
Q 030299 116 DGCKADLVVCDGAP 129 (179)
Q Consensus 116 ~~~~~D~VlsD~~~ 129 (179)
....+|+|+.+-+|
T Consensus 68 ~~~~~D~i~ggpPC 81 (376)
T 3g7u_A 68 NDMPIDGIIGGPPC 81 (376)
T ss_dssp SCCCCCEEEECCCC
T ss_pred cCCCeeEEEecCCC
Confidence 34579999988764
No 288
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.96 E-value=0.0024 Score=54.86 Aligned_cols=58 Identities=14% Similarity=0.043 Sum_probs=46.1
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC--------CCCCCeeEEeccccchhhHHHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM--------APIEGVIQVQGDITNARTAEVV 111 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~--------~~~~~v~~i~gDi~~~~~~~~l 111 (179)
+++.|||||.|+|.+|+.|+++.. ..+|+++++.+. ...++++.+.+|+.+.+...++
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~-------------~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~~~~~~~l 123 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYC-------------PRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDWSTYSNL 123 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHC-------------CSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTCHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCC-------------CCEEEEEecCHHHHHHHHHhccCCCEEEEECCccchhhHHHh
Confidence 468999999999999999999753 258999999972 1246899999999887644333
No 289
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=96.90 E-value=0.0024 Score=59.27 Aligned_cols=84 Identities=10% Similarity=-0.072 Sum_probs=55.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCC-----CCCCC--CC----------------------CCCCeEEEEeCCCCC
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAK-----LSPDS--RE----------------------GDLPLIVAIDLQPMA 90 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~-----~~~~~--~~----------------------~~~~~VvavD~~~~~ 90 (179)
.++..|+|.+||+|.+...++......+. .++-. .. .....|+|+|+++..
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 56789999999999999988876421110 11100 00 123689999999931
Q ss_pred -----------CCCC-eeEEeccccchhhHHHHHhhcCCCCccEEeeCCCC
Q 030299 91 -----------PIEG-VIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 91 -----------~~~~-v~~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
.+.+ +++.++|+.+.... ...+.+|+|++|.+.
T Consensus 269 v~~A~~N~~~agv~~~i~~~~~D~~~~~~~------~~~~~~d~Iv~NPPY 313 (703)
T 3v97_A 269 IQRARTNARLAGIGELITFEVKDVAQLTNP------LPKGPYGTVLSNPPY 313 (703)
T ss_dssp HHHHHHHHHHTTCGGGEEEEECCGGGCCCS------CTTCCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCceEEEECChhhCccc------cccCCCCEEEeCCCc
Confidence 2333 78999999885320 112379999999654
No 290
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=96.59 E-value=0.0026 Score=60.27 Aligned_cols=74 Identities=15% Similarity=0.039 Sum_probs=49.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------------CCCCeeEEeccc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------------PIEGVIQVQGDI 102 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------------~~~~v~~i~gDi 102 (179)
.++.+|+|.|||+|++...++++++. .....++|+|+++.. ..........|+
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~e----------i~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~ 389 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNN----------VMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDV 389 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTT----------CCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCG
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcc----------cCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecch
Confidence 46889999999999999999887641 012579999999831 011223345555
Q ss_pred cchhhHHHHHhhcCCCCccEEeeCCCCC
Q 030299 103 TNARTAEVVIRHFDGCKADLVVCDGAPD 130 (179)
Q Consensus 103 ~~~~~~~~l~~~~~~~~~D~VlsD~~~~ 130 (179)
.+.+. ....+||+|+++.+..
T Consensus 390 L~~~~-------~~~~kFDVVIgNPPYg 410 (878)
T 3s1s_A 390 CSLNP-------EDFANVSVVVMNPPYV 410 (878)
T ss_dssp GGCCG-------GGGTTEEEEEECCBCC
T ss_pred hcccc-------cccCCCCEEEECCCcc
Confidence 55321 1235799999997654
No 291
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=96.28 E-value=0.0065 Score=48.24 Aligned_cols=73 Identities=19% Similarity=0.157 Sum_probs=48.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CC---CCCeeEEeccccch
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------AP---IEGVIQVQGDITNA 105 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~~---~~~v~~i~gDi~~~ 105 (179)
.+.++||++|+ |.-|.++++ .. +++|+++|.++. .+ ..+++++.||+...
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~-~~-------------~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~ 92 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAE-LP-------------GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPT 92 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHT-ST-------------TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSB
T ss_pred hCCCEEEEECc--hHHHHHHHH-cC-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhh
Confidence 56789999998 566666665 32 489999999983 12 23688889997542
Q ss_pred ------------hhHHHHHh---hc-CCCCccEEeeCCC
Q 030299 106 ------------RTAEVVIR---HF-DGCKADLVVCDGA 128 (179)
Q Consensus 106 ------------~~~~~l~~---~~-~~~~~D~VlsD~~ 128 (179)
+...++.. .. ..++||+|+.||.
T Consensus 93 ~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~ 131 (202)
T 3cvo_A 93 GDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGR 131 (202)
T ss_dssp CGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSS
T ss_pred hcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCC
Confidence 11221111 11 2368999999996
No 292
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=96.22 E-value=0.016 Score=47.28 Aligned_cols=42 Identities=10% Similarity=-0.029 Sum_probs=28.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHh------CCCCCCCCCCCCCCCCeEEEEeCCC
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKL------YLPAKLSPDSREGDLPLIVAIDLQP 88 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~------~~~~~~~~~~~~~~~~~VvavD~~~ 88 (179)
+++.+|||+|+|+|.-+..+++.. .+. . ......++++|..|
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~------~-~~~~l~~isiE~~p 106 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQ------A-QLQRLHFISFEKFP 106 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTT------S-SCCEEEEEEEESSC
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCC------C-CcceeEEEEEECCc
Confidence 355799999999999887766543 320 0 00024899999988
No 293
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.08 E-value=0.0037 Score=53.05 Aligned_cols=70 Identities=16% Similarity=0.176 Sum_probs=49.6
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCeeEEeccccchhhHHHHHhhcC
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRHFD 116 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~~~v~~i~gDi~~~~~~~~l~~~~~ 116 (179)
.+|+||.||.||++..+...... ...|+++|+.+.. ..++..++.+||++.... .+.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~------------~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~-~~~---- 65 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIP------------AQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLE-EFD---- 65 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCS------------EEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHH-HHH----
T ss_pred CeEEEeCcCccHHHHHHHHCCCC------------ceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHh-HcC----
Confidence 47999999999999998776210 1369999999842 245666789999986431 121
Q ss_pred CCCccEEeeCCCC
Q 030299 117 GCKADLVVCDGAP 129 (179)
Q Consensus 117 ~~~~D~VlsD~~~ 129 (179)
...+|+|+.+-+|
T Consensus 66 ~~~~D~l~~gpPC 78 (343)
T 1g55_A 66 RLSFDMILMSPPC 78 (343)
T ss_dssp HHCCSEEEECCC-
T ss_pred cCCcCEEEEcCCC
Confidence 1258999998764
No 294
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=96.07 E-value=0.0039 Score=56.29 Aligned_cols=81 Identities=15% Similarity=0.156 Sum_probs=48.2
Q ss_pred EEEEEccCCChHHHHHHHHhCCCCCCCC-C-CCCCCCCeEEEEeCCCCC-----------CCC-CeeEEeccccchhhHH
Q 030299 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSP-D-SREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNARTAE 109 (179)
Q Consensus 44 ~VlDLgagpGg~s~~l~~~~~~~~~~~~-~-~~~~~~~~VvavD~~~~~-----------~~~-~v~~i~gDi~~~~~~~ 109 (179)
+|+|.|||+|++...+++.+........ + ........++|+|+++.. .+. ++.+.++|....+.
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~-- 324 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQ-- 324 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCS--
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcc--
Confidence 9999999999998887665420000000 0 000002479999999831 111 23236777665431
Q ss_pred HHHhhcCCCCccEEeeCCCCCC
Q 030299 110 VVIRHFDGCKADLVVCDGAPDV 131 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~~~~ 131 (179)
+...+||+|+++.+...
T Consensus 325 -----~~~~~fD~Iv~NPPf~~ 341 (544)
T 3khk_A 325 -----HPDLRADFVMTNPPFNM 341 (544)
T ss_dssp -----CTTCCEEEEEECCCSSC
T ss_pred -----cccccccEEEECCCcCC
Confidence 23468999999987754
No 295
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=95.96 E-value=0.0069 Score=54.44 Aligned_cols=88 Identities=11% Similarity=-0.022 Sum_probs=52.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------APIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~~~~~v~~i~gDi~~~~~~ 108 (179)
.++.+|+|-|||+|||...+.+.+....+............++|+|+.+. .......+..+|....+..
T Consensus 216 ~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~ 295 (530)
T 3ufb_A 216 QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLR 295 (530)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGG
T ss_pred CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchh
Confidence 46789999999999999888776642100000000001246999999983 1223334557776543211
Q ss_pred HHHHhhcCCCCccEEeeCCCCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGAPDV 131 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~~~~ 131 (179)
......+||+|+++.+++.
T Consensus 296 ----~~~~~~~fD~Il~NPPf~~ 314 (530)
T 3ufb_A 296 ----EMGDKDRVDVILTNPPFGG 314 (530)
T ss_dssp ----GCCGGGCBSEEEECCCSSC
T ss_pred ----hhcccccceEEEecCCCCc
Confidence 1122357999999977643
No 296
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=95.90 E-value=0.02 Score=47.97 Aligned_cols=112 Identities=12% Similarity=-0.002 Sum_probs=74.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------------CCCCeeEEecccc
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------PIEGVIQVQGDIT 103 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------------~~~~v~~i~gDi~ 103 (179)
.+..+||=||.|-|+....+++..+ ..+|+.||+.|.- .-++++.+.+|..
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~-------------v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~ 148 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKN-------------VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGV 148 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTT-------------CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTT
T ss_pred CCCCeEEEECCCchHHHHHHHHcCC-------------cceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHH
Confidence 4567999999999999998887543 4689999999830 1368999999998
Q ss_pred chhhHHHHHhhcCCCCccEEeeCCCCCCCCCCcccHHHHHHHHHHHHHH---H------------HHHHHHHHHHHhhce
Q 030299 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAVSIQ---F------------FIYELVFCLRQLLQY 168 (179)
Q Consensus 104 ~~~~~~~l~~~~~~~~~D~VlsD~~~~~~g~~~~d~~~q~~L~~~AL~~---~------------~~~~~~~~~~~~f~~ 168 (179)
..-. -..++||+|+.|..-..+-....-...-.+++..+|+- + .+...+=-+++.|..
T Consensus 149 ~~l~-------~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~~ 221 (294)
T 3o4f_A 149 NFVN-------QTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSD 221 (294)
T ss_dssp TTTS-------CSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHCSE
T ss_pred HHHh-------hccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhCCc
Confidence 7521 13468999999986332222222223345666666651 0 123344456888888
Q ss_pred EEE
Q 030299 169 VIL 171 (179)
Q Consensus 169 v~~ 171 (179)
|..
T Consensus 222 v~~ 224 (294)
T 3o4f_A 222 VGF 224 (294)
T ss_dssp EEE
T ss_pred eee
Confidence 765
No 297
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.72 E-value=0.011 Score=48.70 Aligned_cols=35 Identities=20% Similarity=0.081 Sum_probs=30.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM 89 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~ 89 (179)
.+|+.|||++||+|..+..++.. + ..++|+|+++.
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~-g--------------~~~~g~e~~~~ 268 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW-G--------------RRALGVELVPR 268 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-T--------------CEEEEEESCHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc-C--------------CeEEEEeCCHH
Confidence 68999999999999998887664 3 58999999983
No 298
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=95.51 E-value=0.051 Score=45.11 Aligned_cols=74 Identities=12% Similarity=-0.038 Sum_probs=51.3
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------------------------------
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------------------------ 90 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------------------------------ 90 (179)
....||++|+..|+.+..++..++.. +.++.+|+++|.....
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~--------g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~a 177 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAH--------DVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEV 177 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHT--------TCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHH
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhc--------CCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHH
Confidence 35599999999999999988765310 0015789999975310
Q ss_pred -------CC--CCeeEEeccccchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 91 -------PI--EGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 91 -------~~--~~v~~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
++ .+++++.||+.+.- ..++..++|+|..|+.
T Consensus 178 r~n~~~~gl~~~~I~li~Gda~etL------~~~~~~~~d~vfIDaD 218 (282)
T 2wk1_A 178 RRNFRNYDLLDEQVRFLPGWFKDTL------PTAPIDTLAVLRMDGD 218 (282)
T ss_dssp HHHHHHTTCCSTTEEEEESCHHHHS------TTCCCCCEEEEEECCC
T ss_pred HHHHHHcCCCcCceEEEEeCHHHHH------hhCCCCCEEEEEEcCC
Confidence 11 56889999986532 1234568999999974
No 299
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=95.46 E-value=0.2 Score=38.37 Aligned_cols=89 Identities=15% Similarity=0.095 Sum_probs=59.5
Q ss_pred EEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--CCCCeeEEeccccc-hhhHHHHHhhcCCCCc
Q 030299 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--PIEGVIQVQGDITN-ARTAEVVIRHFDGCKA 120 (179)
Q Consensus 44 ~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~--~~~~v~~i~gDi~~-~~~~~~l~~~~~~~~~ 120 (179)
+||=.| |+|+.-..+++++.. .+..|++++.++.. ...+++++++|+++ .+...+ .+. .+
T Consensus 2 ~ilItG-atG~iG~~l~~~L~~-----------~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~---~~~--~~ 64 (219)
T 3dqp_A 2 KIFIVG-STGRVGKSLLKSLST-----------TDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAK---QLH--GM 64 (219)
T ss_dssp EEEEES-TTSHHHHHHHHHHTT-----------SSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHT---TTT--TC
T ss_pred eEEEEC-CCCHHHHHHHHHHHH-----------CCCEEEEEECCccchhhcCCceEEEecccCCHHHHHH---HHc--CC
Confidence 566556 468888888887753 24789999988743 34789999999999 654433 232 59
Q ss_pred cEEeeCCCCCCCCCCcccHHHHHHHHHHH
Q 030299 121 DLVVCDGAPDVTGLHDMDEFVQSQLILAV 149 (179)
Q Consensus 121 D~VlsD~~~~~~g~~~~d~~~q~~L~~~A 149 (179)
|+|++..+................++..+
T Consensus 65 d~vi~~ag~~~~~~~~~n~~~~~~l~~a~ 93 (219)
T 3dqp_A 65 DAIINVSGSGGKSLLKVDLYGAVKLMQAA 93 (219)
T ss_dssp SEEEECCCCTTSSCCCCCCHHHHHHHHHH
T ss_pred CEEEECCcCCCCCcEeEeHHHHHHHHHHH
Confidence 99999887655444444444445555444
No 300
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=94.95 E-value=0.045 Score=45.64 Aligned_cols=73 Identities=18% Similarity=0.145 Sum_probs=50.9
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCe-EEEEeCCCCC------CCCCeeEEeccccchhhHHHHHh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPL-IVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~-VvavD~~~~~------~~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
...+|+||.||.||++.-+.+. +- ... |.++|+.+.. ..++...+.+||++... +++.+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~a-G~------------~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~-~~i~~ 80 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDL-GI------------QVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQ-KHIQE 80 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHT-TB------------CEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCH-HHHHH
T ss_pred CCCEEEEeCcCccHHHHHHHHC-CC------------ccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccH-HHhcc
Confidence 4568999999999999888664 31 122 6999999842 24566688999998753 22322
Q ss_pred hcCCCCccEEeeCCCCC
Q 030299 114 HFDGCKADLVVCDGAPD 130 (179)
Q Consensus 114 ~~~~~~~D~VlsD~~~~ 130 (179)
. ..+|+|+..-+|.
T Consensus 81 -~--~~~Dll~ggpPCQ 94 (295)
T 2qrv_A 81 -W--GPFDLVIGGSPCN 94 (295)
T ss_dssp -T--CCCSEEEECCCCG
T ss_pred -c--CCcCEEEecCCCc
Confidence 1 3699999876543
No 301
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=94.68 E-value=0.025 Score=47.93 Aligned_cols=70 Identities=14% Similarity=0.255 Sum_probs=48.9
Q ss_pred EEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCeeEEeccccchhhHHHHHhhcCC
Q 030299 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRHFDG 117 (179)
Q Consensus 44 ~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~~~v~~i~gDi~~~~~~~~l~~~~~~ 117 (179)
+|+||.||.||++.-+.+. +. +.-.|.|+|+.+.. ..++..++.+||++... +++ +.
T Consensus 5 ~~idLFaG~GG~~~G~~~a-G~-----------~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~-~~~----~~ 67 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKES-GL-----------DGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTP-QVI----KK 67 (333)
T ss_dssp EEEEETCTTTHHHHHHHHH-TC-----------SEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCH-HHH----HH
T ss_pred EEEEECcCccHHHHHHHHc-CC-----------CceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCH-HHh----cc
Confidence 7999999999999988665 21 01357899999853 34566678999998753 222 22
Q ss_pred CCccEEeeCCCCC
Q 030299 118 CKADLVVCDGAPD 130 (179)
Q Consensus 118 ~~~D~VlsD~~~~ 130 (179)
..+|+++..-+|.
T Consensus 68 ~~~D~l~ggpPCQ 80 (333)
T 4h0n_A 68 WNVDTILMSPPCQ 80 (333)
T ss_dssp TTCCEEEECCCCC
T ss_pred CCCCEEEecCCCc
Confidence 3689998766543
No 302
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.51 E-value=0.042 Score=47.59 Aligned_cols=38 Identities=16% Similarity=0.066 Sum_probs=32.0
Q ss_pred CCCCEEEEEccCCChHHHHHHH-HhCCCCCCCCCCCCCCCCeEEEEeCCCC
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSR-KLYLPAKLSPDSREGDLPLIVAIDLQPM 89 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~-~~~~~~~~~~~~~~~~~~~VvavD~~~~ 89 (179)
+++..|+|+||..|.+|..++. ..+. .++|+|+++.|.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~------------~~~V~afEP~p~ 263 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGK------------FERVWMIEPDRI 263 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSC------------CSEEEEECCCHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCC------------CCEEEEEcCCHH
Confidence 7899999999999999999884 4431 379999999983
No 303
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=94.28 E-value=0.55 Score=36.71 Aligned_cols=80 Identities=11% Similarity=0.130 Sum_probs=57.2
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCeeEEeccccchhhHHHHHhhcCCCCc
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v~~i~gDi~~~~~~~~l~~~~~~~~~ 120 (179)
++++||=-|++ ||.-..+++++.. .....|+.+|..+......+.++++|+++.+..+++.+......+
T Consensus 3 ~~k~vlITGas-~gIG~~~a~~l~~----------~~g~~v~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~i 71 (244)
T 4e4y_A 3 AMANYLVTGGS-KGIGKAVVELLLQ----------NKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDIIKNVSF 71 (244)
T ss_dssp CCEEEEEETTT-SHHHHHHHHHHTT----------STTEEEEEEESSCCCCCTTEEEEECCTTCHHHHHHHHHHTTTCCE
T ss_pred CCCeEEEeCCC-ChHHHHHHHHHHh----------cCCcEEEEeccccccccccceEEecCcCCHHHHHHHHHHHHhCCC
Confidence 35567777766 5566666666542 024678899988764556888999999999877777765555579
Q ss_pred cEEeeCCCCCC
Q 030299 121 DLVVCDGAPDV 131 (179)
Q Consensus 121 D~VlsD~~~~~ 131 (179)
|+++++.+...
T Consensus 72 d~lv~nAg~~~ 82 (244)
T 4e4y_A 72 DGIFLNAGILI 82 (244)
T ss_dssp EEEEECCCCCC
T ss_pred CEEEECCccCC
Confidence 99999887543
No 304
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=94.15 E-value=0.11 Score=42.88 Aligned_cols=64 Identities=16% Similarity=0.248 Sum_probs=45.1
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCeeEEeccccchhhHHHHHhhcC
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRHFD 116 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~~~v~~i~gDi~~~~~~~~l~~~~~ 116 (179)
.+|+||-||.||++.-+.+. + --.|.|+|+.+.. ..+ -..+.+||++.... .+
T Consensus 1 mkvidLFsG~GG~~~G~~~a-G-------------~~~v~a~e~d~~a~~ty~~N~~-~~~~~~DI~~i~~~-----~~- 59 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA-G-------------FRIICANEYDKSIWKTYESNHS-AKLIKGDISKISSD-----EF- 59 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT-T-------------CEEEEEEECCTTTHHHHHHHCC-SEEEESCGGGCCGG-----GS-
T ss_pred CeEEEeCcCccHHHHHHHHC-C-------------CEEEEEEeCCHHHHHHHHHHCC-CCcccCChhhCCHh-----hC-
Confidence 47999999999999987553 3 2357799999964 133 35778999986531 23
Q ss_pred CCCccEEeeCCC
Q 030299 117 GCKADLVVCDGA 128 (179)
Q Consensus 117 ~~~~D~VlsD~~ 128 (179)
..+|+++.--+
T Consensus 60 -~~~D~l~ggpP 70 (331)
T 3ubt_Y 60 -PKCDGIIGGPP 70 (331)
T ss_dssp -CCCSEEECCCC
T ss_pred -CcccEEEecCC
Confidence 36898875443
No 305
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=93.84 E-value=0.048 Score=40.54 Aligned_cols=61 Identities=10% Similarity=-0.037 Sum_probs=36.5
Q ss_pred CCCCCEEEEEccCCChH--HHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCeeEEeccccchhhHHHHHhhcC
Q 030299 39 FEGVKRVVDLCAAPGSW--SQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD 116 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~--s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v~~i~gDi~~~~~~~~l~~~~~ 116 (179)
+++|++|||||||.... +..+.+.... ....+++++++|+.+.+.. .++
T Consensus 10 ~~~g~~vL~~~~g~v~vD~s~~ml~~a~~------------------------~~~~~~~~~~~d~~~~~~~-----~~~ 60 (176)
T 2ld4_A 10 ISAGQFVAVVWDKSSPVEALKGLVDKLQA------------------------LTGNEGRVSVENIKQLLQS-----AHK 60 (176)
T ss_dssp CCTTSEEEEEECTTSCHHHHHHHHHHHHH------------------------HTTTTSEEEEEEGGGGGGG-----CCC
T ss_pred CCCCCEEEEecCCceeeeCCHHHHHHHHH------------------------hcccCcEEEEechhcCccc-----cCC
Confidence 58999999999997541 1111111100 0012478889999876410 124
Q ss_pred CCCccEEeeCCC
Q 030299 117 GCKADLVVCDGA 128 (179)
Q Consensus 117 ~~~~D~VlsD~~ 128 (179)
+.+||+|++...
T Consensus 61 ~~~fD~V~~~~~ 72 (176)
T 2ld4_A 61 ESSFDIILSGLV 72 (176)
T ss_dssp SSCEEEEEECCS
T ss_pred CCCEeEEEECCh
Confidence 678999998654
No 306
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=93.81 E-value=0.045 Score=46.14 Aligned_cols=66 Identities=18% Similarity=0.181 Sum_probs=46.4
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCeeEEeccccchhhHHHHHhhc
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRHF 115 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~~~v~~i~gDi~~~~~~~~l~~~~ 115 (179)
+.+|+||.||.||++.-+... + --.|.++|+.+.. ..+... .+||++.... .+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G-------------~~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~~-----~~ 69 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-G-------------AECVYSNEWDKYAQEVYEMNFGEKP--EGDITQVNEK-----TI 69 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-T-------------CEEEEEECCCHHHHHHHHHHHSCCC--BSCGGGSCGG-----GS
T ss_pred CCcEEEECCCcCHHHHHHHHC-C-------------CeEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHcCHh-----hC
Confidence 468999999999999998765 3 2468899999842 122222 6899886431 22
Q ss_pred CCCCccEEeeCCCCC
Q 030299 116 DGCKADLVVCDGAPD 130 (179)
Q Consensus 116 ~~~~~D~VlsD~~~~ 130 (179)
+ .+|+|+.+-+|.
T Consensus 70 ~--~~D~l~~gpPCQ 82 (327)
T 2c7p_A 70 P--DHDILCAGFPCQ 82 (327)
T ss_dssp C--CCSEEEEECCCT
T ss_pred C--CCCEEEECCCCC
Confidence 2 589999877543
No 307
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=93.61 E-value=0.031 Score=47.24 Aligned_cols=72 Identities=7% Similarity=0.132 Sum_probs=47.7
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeE-EEEeCCCCC------CCCCeeEEeccccchhhHHHHHh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLI-VAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~V-vavD~~~~~------~~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
..-+|+||.||.||++.-+.+. +- +.-.| .|+|+.+.. ..++. .+.+||++... +++.
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~a-G~-----------~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~-~~i~- 73 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERS-SI-----------NINATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISI-KQIE- 73 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHS-SC-----------CCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCH-HHHH-
T ss_pred CCCEEEEECCChhHHHHHHHHc-CC-----------CceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCH-HHhc-
Confidence 3458999999999999988664 21 01245 699999842 12333 56899998753 2222
Q ss_pred hcCCCCccEEeeCCCCC
Q 030299 114 HFDGCKADLVVCDGAPD 130 (179)
Q Consensus 114 ~~~~~~~D~VlsD~~~~ 130 (179)
...+|+++..-+|.
T Consensus 74 ---~~~~Dil~ggpPCQ 87 (327)
T 3qv2_A 74 ---SLNCNTWFMSPPCQ 87 (327)
T ss_dssp ---HTCCCEEEECCCCT
T ss_pred ---cCCCCEEEecCCcc
Confidence 23689999866543
No 308
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=93.21 E-value=1.2 Score=37.46 Aligned_cols=83 Identities=17% Similarity=0.184 Sum_probs=54.6
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCeeEEeccccchhhHHHHHhhcC
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFD 116 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----~~~~v~~i~gDi~~~~~~~~l~~~~~ 116 (179)
.|..|+=+|||||....++++..+.. +...+.+.+|..|.. +.+||..++. ..+.....++.+.+.
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~---------f~~ikWvLiDPap~~~~l~~~~NV~li~~-fvde~dl~~l~~~~~ 129 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNL---------GVIIKWMLIDGRHHDPILNGLRDVTLVTR-FVDEEYLRSIKKQLH 129 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHT---------TCCCEEEEEESSCCCGGGTTCTTEEEEEC-CCCHHHHHHHHHHHT
T ss_pred CCcEEEEecccCccHHHHHHHhchhh---------CCCeEEEEEcCCcchhhhcCCCcEEEEec-cCCHHHHHHHHHhcc
Confidence 46899999999999999999876520 124689999998864 5688987766 346555555554443
Q ss_pred CCCccEEeeCCCCCCCCC
Q 030299 117 GCKADLVVCDGAPDVTGL 134 (179)
Q Consensus 117 ~~~~D~VlsD~~~~~~g~ 134 (179)
..==+.++|....-.+.
T Consensus 130 -~~~iLLISDIRS~r~~~ 146 (307)
T 3mag_A 130 -PSKIILISDVRSKRGGN 146 (307)
T ss_dssp -TSCEEEEECCCC-----
T ss_pred -CCCEEEEEEecCCCCCC
Confidence 23345678887554333
No 309
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=92.94 E-value=0.36 Score=39.34 Aligned_cols=72 Identities=18% Similarity=0.194 Sum_probs=50.6
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCeeEEeccccchhhHHHHHhhcCCCCc
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v~~i~gDi~~~~~~~~l~~~~~~~~~ 120 (179)
++++||=.|+ +|..-..+++++-. .+..|+++|.++.. .++.++++|+++.+...++.+ .+
T Consensus 18 ~~~~vlVtGa-tG~iG~~l~~~L~~-----------~G~~V~~~~r~~~~--~~~~~~~~Dl~d~~~~~~~~~-----~~ 78 (347)
T 4id9_A 18 GSHMILVTGS-AGRVGRAVVAALRT-----------QGRTVRGFDLRPSG--TGGEEVVGSLEDGQALSDAIM-----GV 78 (347)
T ss_dssp ---CEEEETT-TSHHHHHHHHHHHH-----------TTCCEEEEESSCCS--SCCSEEESCTTCHHHHHHHHT-----TC
T ss_pred CCCEEEEECC-CChHHHHHHHHHHh-----------CCCEEEEEeCCCCC--CCccEEecCcCCHHHHHHHHh-----CC
Confidence 4567887774 57777777666532 14689999988754 688899999999876655542 68
Q ss_pred cEEeeCCCCCC
Q 030299 121 DLVVCDGAPDV 131 (179)
Q Consensus 121 D~VlsD~~~~~ 131 (179)
|+|++.+++..
T Consensus 79 d~vih~A~~~~ 89 (347)
T 4id9_A 79 SAVLHLGAFMS 89 (347)
T ss_dssp SEEEECCCCCC
T ss_pred CEEEECCcccC
Confidence 99999876543
No 310
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=92.75 E-value=0.76 Score=39.73 Aligned_cols=71 Identities=14% Similarity=0.100 Sum_probs=50.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------C-----------CCCeeEEec
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P-----------IEGVIQVQG 100 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~--------~-----------~~~v~~i~g 100 (179)
.+..+||=||.|-|+....+++. + ..+|+.||+.|.- + .++++.+.+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh-~-------------~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~ 269 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL-K-------------PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIE 269 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-C-------------CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEES
T ss_pred CCCCeEEEECCCcHHHHHHHHhc-C-------------CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehH
Confidence 34679999999999999988764 3 3689999999830 1 135777888
Q ss_pred cccchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 101 DITNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 101 Di~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
|....- ++..+ .+++||+|+.|..
T Consensus 270 Da~~fl--~~~~~--~~~~yDvIIvDl~ 293 (381)
T 3c6k_A 270 DCIPVL--KRYAK--EGREFDYVINDLT 293 (381)
T ss_dssp CHHHHH--HHHHH--HTCCEEEEEEECC
T ss_pred HHHHHH--Hhhhh--ccCceeEEEECCC
Confidence 877631 11111 1357999999974
No 311
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=92.44 E-value=0.19 Score=44.75 Aligned_cols=71 Identities=17% Similarity=0.128 Sum_probs=47.8
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------C---CCCeeEEeccccchhh------
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P---IEGVIQVQGDITNART------ 107 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~---~~~v~~i~gDi~~~~~------ 107 (179)
-+|+||.||.||++.-+.+. + .-.|.|+|+.+.. . .++...+.+||++...
T Consensus 89 ~~viDLFaG~GGlslG~~~a-G-------------~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~ 154 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESI-G-------------GQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGV 154 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTT-T-------------EEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTS
T ss_pred ceEEEecCCccHHHHHHHHC-C-------------CEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhcccccc
Confidence 58999999999999988653 3 2358999999842 1 2566677899987642
Q ss_pred -----HHHHHhhcCCCCccEEeeCCCC
Q 030299 108 -----AEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 108 -----~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
.+.+.... ..+|+|+..-+|
T Consensus 155 ~~~~~~~~i~~~~--~~~Dvl~gGpPC 179 (482)
T 3me5_A 155 SDEAAAEHIRQHI--PEHDVLLAGFPC 179 (482)
T ss_dssp CHHHHHHHHHHHS--CCCSEEEEECCC
T ss_pred chhhHHhhhhhcC--CCCCEEEecCCC
Confidence 11222223 358998875543
No 312
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=92.40 E-value=0.63 Score=37.22 Aligned_cols=80 Identities=13% Similarity=0.090 Sum_probs=52.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCeeEEeccccchhhHHHHHhhcC--C
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD--G 117 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v~~i~gDi~~~~~~~~l~~~~~--~ 117 (179)
.++++||=-|++.| .-..+++++.. .+..|+.+|.++......+.++++|+++.+..+++.+... -
T Consensus 12 ~~~k~vlVTGas~G-IG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (269)
T 3vtz_A 12 FTDKVAIVTGGSSG-IGLAVVDALVR-----------YGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKY 79 (269)
T ss_dssp TTTCEEEESSTTSH-HHHHHHHHHHH-----------TTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCH-HHHHHHHHHHH-----------CCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 35778888887655 44444444421 1578999998875544567888999999876555554321 1
Q ss_pred CCccEEeeCCCCCC
Q 030299 118 CKADLVVCDGAPDV 131 (179)
Q Consensus 118 ~~~D~VlsD~~~~~ 131 (179)
+++|+|+++.+...
T Consensus 80 g~iD~lv~nAg~~~ 93 (269)
T 3vtz_A 80 GRIDILVNNAGIEQ 93 (269)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCCEEEECCCcCC
Confidence 36999999887543
No 313
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=92.15 E-value=0.13 Score=41.45 Aligned_cols=34 Identities=15% Similarity=0.139 Sum_probs=29.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCC
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP 88 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~ 88 (179)
++|+.|||..||.|..+..+.+. + -+++|+|+++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~-g--------------r~~ig~e~~~ 244 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL-G--------------RNFIGCDMNA 244 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT-T--------------CEEEEEESCH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc-C--------------CeEEEEeCCH
Confidence 78999999999999988877654 3 5899999987
No 314
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=92.10 E-value=2.4 Score=36.03 Aligned_cols=77 Identities=18% Similarity=0.232 Sum_probs=54.1
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC----CCCCCeeEEeccccchhhHHHHHhhcC
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----APIEGVIQVQGDITNARTAEVVIRHFD 116 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~----~~~~~v~~i~gDi~~~~~~~~l~~~~~ 116 (179)
+|..|+=+|+|||.+..+|.+..+. -+...+.+.+|..+. ++.++++.++. .++.+..+.+.+.+.
T Consensus 75 ~g~~VVYaGsAPG~HI~fL~~lF~~---------l~~~lkwvLiDp~~f~~~Le~~~ni~li~~-ffde~~i~~l~~~~~ 144 (348)
T 1vpt_A 75 DGATVVYIGSAPGTHIRYLRDHFYN---------LGVIIKWMLIDGRHHDPILNGLRDVTLVTR-FVDEEYLRSIKKQLH 144 (348)
T ss_dssp TTCEEEEESCSSCHHHHHHHHHHHH---------TTCCCEEEEEESSCCCGGGTTCTTEEEEEC-CCCHHHHHHHHHHHT
T ss_pred CCCeEEEeCcCCcchHHHHHHHhhh---------cCCceEEEEECCCchhhhhcCCCcEEeehh-hcCHHHHHHHHHHhc
Confidence 4679999999999999999986641 011368899999996 35678866654 666666666666655
Q ss_pred CCCccE-EeeCCCC
Q 030299 117 GCKADL-VVCDGAP 129 (179)
Q Consensus 117 ~~~~D~-VlsD~~~ 129 (179)
+. ++ .+||...
T Consensus 145 ~~--~vLfISDIRS 156 (348)
T 1vpt_A 145 PS--KIILISDVAS 156 (348)
T ss_dssp TS--CEEEEECCCC
T ss_pred CC--CEEEEEeccc
Confidence 43 54 4788864
No 315
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=91.95 E-value=0.42 Score=41.12 Aligned_cols=82 Identities=13% Similarity=0.015 Sum_probs=45.3
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCC--CCCCCCCCCCCCeEEEEeCCCCC------CCC-----------------Cee
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPA--KLSPDSREGDLPLIVAIDLQPMA------PIE-----------------GVI 96 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~--~~~~~~~~~~~~~VvavD~~~~~------~~~-----------------~v~ 96 (179)
+.+|+|||||+|..|..+...+-... +........+...|.-.|+-... .++ +-.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 57899999999999997743221000 00000001236788888976642 011 112
Q ss_pred EEeccccchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 97 QVQGDITNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 97 ~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
|+.|...+.-. ..+++..+|+|+|..+
T Consensus 133 f~~gvpgSFy~-----rlfP~~S~d~v~Ss~a 159 (374)
T 3b5i_A 133 FVAGVPGSFYR-----RLFPARTIDFFHSAFS 159 (374)
T ss_dssp EEEEEESCTTS-----CCSCTTCEEEEEEESC
T ss_pred EEEecChhhhc-----ccCCCcceEEEEecce
Confidence 44444333211 1267789999999764
No 316
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=91.73 E-value=1 Score=34.26 Aligned_cols=71 Identities=20% Similarity=0.139 Sum_probs=49.8
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC---CCCeeEEeccccchhhHHHHHhhcCCCC
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---IEGVIQVQGDITNARTAEVVIRHFDGCK 119 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~---~~~v~~i~gDi~~~~~~~~l~~~~~~~~ 119 (179)
++||=.|+ +|+.-..+++++.. .+..|++++.++... ..++.++++|+++.+...++.+ .
T Consensus 5 ~~ilItGa-tG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~ 67 (227)
T 3dhn_A 5 KKIVLIGA-SGFVGSALLNEALN-----------RGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCK-----G 67 (227)
T ss_dssp CEEEEETC-CHHHHHHHHHHHHT-----------TTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHT-----T
T ss_pred CEEEEEcC-CchHHHHHHHHHHH-----------CCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhc-----C
Confidence 46776664 56677777666532 247899999887431 2689999999999876655542 5
Q ss_pred ccEEeeCCCCC
Q 030299 120 ADLVVCDGAPD 130 (179)
Q Consensus 120 ~D~VlsD~~~~ 130 (179)
+|+|++..++.
T Consensus 68 ~d~vi~~a~~~ 78 (227)
T 3dhn_A 68 ADAVISAFNPG 78 (227)
T ss_dssp CSEEEECCCC-
T ss_pred CCEEEEeCcCC
Confidence 89999987654
No 317
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=91.63 E-value=0.19 Score=42.76 Aligned_cols=73 Identities=18% Similarity=0.141 Sum_probs=47.2
Q ss_pred CCCCCEEEEEccCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCeeEEeccccchhh-HHHHH
Q 030299 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNART-AEVVI 112 (179)
Q Consensus 39 l~~g~~VlDLgagp-Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----~~~~v~~i~gDi~~~~~-~~~l~ 112 (179)
+++|++||-+|||+ |..+..+++..+ ..+|+++|.++.+ .--|+..+ |..+.+. .+.+.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~i--~~~~~~~~~~~~~ 247 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLG-------------AACVIVGDQNPERLKLLSDAGFETI--DLRNSAPLRDQID 247 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-------------CSEEEEEESCHHHHHHHHTTTCEEE--ETTSSSCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEEcCCHHHHHHHHHcCCcEE--cCCCcchHHHHHH
Confidence 47899999999977 777777777765 2489999988732 11255433 3333332 34444
Q ss_pred hhcCCCCccEEeeC
Q 030299 113 RHFDGCKADLVVCD 126 (179)
Q Consensus 113 ~~~~~~~~D~VlsD 126 (179)
+...+.++|+|+-.
T Consensus 248 ~~~~g~g~Dvvid~ 261 (398)
T 2dph_A 248 QILGKPEVDCGVDA 261 (398)
T ss_dssp HHHSSSCEEEEEEC
T ss_pred HHhCCCCCCEEEEC
Confidence 44444579999854
No 318
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=91.47 E-value=1.2 Score=36.62 Aligned_cols=76 Identities=12% Similarity=-0.001 Sum_probs=51.4
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------------C-----CCCCeeEEecccc
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------------A-----PIEGVIQVQGDIT 103 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~------------~-----~~~~v~~i~gDi~ 103 (179)
.+++||=.| |+|+.-..+++++.. .+.+..|+++|.++. . ...++.++++|++
T Consensus 9 ~~~~vlVTG-atG~IG~~l~~~L~~---------~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 78 (362)
T 3sxp_A 9 ENQTILITG-GAGFVGSNLAFHFQE---------NHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADIN 78 (362)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHH---------HCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTT
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHh---------hCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCC
Confidence 356888777 567777776666531 001578999997543 1 1236789999999
Q ss_pred chhhHHHHHhhcCCCCccEEeeCCCCC
Q 030299 104 NARTAEVVIRHFDGCKADLVVCDGAPD 130 (179)
Q Consensus 104 ~~~~~~~l~~~~~~~~~D~VlsD~~~~ 130 (179)
+.+..+++ ...++|+|++.++..
T Consensus 79 d~~~~~~~----~~~~~D~vih~A~~~ 101 (362)
T 3sxp_A 79 NPLDLRRL----EKLHFDYLFHQAAVS 101 (362)
T ss_dssp CHHHHHHH----TTSCCSEEEECCCCC
T ss_pred CHHHHHHh----hccCCCEEEECCccC
Confidence 98776655 124799999988743
No 319
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=91.21 E-value=1.6 Score=33.88 Aligned_cols=79 Identities=14% Similarity=0.120 Sum_probs=52.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCeeEEeccccchhhHHHHHhh----c
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRH----F 115 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v~~i~gDi~~~~~~~~l~~~----~ 115 (179)
..+++||=.|++ ||.-..+++++.. .+..|+.+|.++......+.++++|+++.+..+++.+. +
T Consensus 5 ~~~k~vlVTGas-~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 72 (241)
T 1dhr_A 5 GEARRVLVYGGR-GALGSRCVQAFRA-----------RNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLL 72 (241)
T ss_dssp -CCCEEEEETTT-SHHHHHHHHHHHT-----------TTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-cHHHHHHHHHHHh-----------CCCEEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 356778877765 4555556665532 25789999988754333466779999998765555443 3
Q ss_pred CCCCccEEeeCCCCC
Q 030299 116 DGCKADLVVCDGAPD 130 (179)
Q Consensus 116 ~~~~~D~VlsD~~~~ 130 (179)
..+++|+|++..+..
T Consensus 73 ~~g~iD~lv~~Ag~~ 87 (241)
T 1dhr_A 73 GDQKVDAILCVAGGW 87 (241)
T ss_dssp TTCCEEEEEECCCCC
T ss_pred CCCCCCEEEEccccc
Confidence 214799999998754
No 320
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.15 E-value=0.45 Score=37.81 Aligned_cols=71 Identities=15% Similarity=0.214 Sum_probs=51.8
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCeeEEeccccchhhHHHHHhhcCCCCcc
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKAD 121 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v~~i~gDi~~~~~~~~l~~~~~~~~~D 121 (179)
+++||=.| + |.....+++++-. .+..|++++.++....++++++++|+++.+...++.+ +.+|
T Consensus 3 ~~~ilVtG-a-G~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~d 65 (286)
T 3gpi_A 3 LSKILIAG-C-GDLGLELARRLTA-----------QGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVH----LRPE 65 (286)
T ss_dssp CCCEEEEC-C-SHHHHHHHHHHHH-----------TTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGG----GCCS
T ss_pred CCcEEEEC-C-CHHHHHHHHHHHH-----------CCCEEEEEeCCccccccCCceEEccCCChHHHHHhhc----CCCC
Confidence 35788888 4 8888888777632 1468999998875545789999999999876444332 2599
Q ss_pred EEeeCCCC
Q 030299 122 LVVCDGAP 129 (179)
Q Consensus 122 ~VlsD~~~ 129 (179)
+|++-+++
T Consensus 66 ~vih~a~~ 73 (286)
T 3gpi_A 66 ILVYCVAA 73 (286)
T ss_dssp EEEECHHH
T ss_pred EEEEeCCC
Confidence 99997754
No 321
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=90.88 E-value=1.3 Score=35.94 Aligned_cols=75 Identities=23% Similarity=0.251 Sum_probs=53.0
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------CCCCCeeEEeccccchhhHHHHHhhc
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------APIEGVIQVQGDITNARTAEVVIRHF 115 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~------~~~~~v~~i~gDi~~~~~~~~l~~~~ 115 (179)
+++||=.|| +|+.-..+++++.. .+..|++++..+. ..+.++.++.+|+++.+...++.+..
T Consensus 20 ~~~vlVTGa-sG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~ 87 (330)
T 2pzm_A 20 HMRILITGG-AGCLGSNLIEHWLP-----------QGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF 87 (330)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHGG-----------GTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECC-CCHHHHHHHHHHHH-----------CCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc
Confidence 568888775 46676777666542 1468999998543 22368999999999987666655433
Q ss_pred CCCCccEEeeCCCCCC
Q 030299 116 DGCKADLVVCDGAPDV 131 (179)
Q Consensus 116 ~~~~~D~VlsD~~~~~ 131 (179)
++|+|++.++...
T Consensus 88 ---~~D~vih~A~~~~ 100 (330)
T 2pzm_A 88 ---KPTHVVHSAAAYK 100 (330)
T ss_dssp ---CCSEEEECCCCCS
T ss_pred ---CCCEEEECCccCC
Confidence 6899999887543
No 322
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=90.75 E-value=1.2 Score=35.22 Aligned_cols=71 Identities=24% Similarity=0.308 Sum_probs=51.8
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-CCCeeEEeccccchhhHHHHHhhcCCCCcc
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-IEGVIQVQGDITNARTAEVVIRHFDGCKAD 121 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~-~~~v~~i~gDi~~~~~~~~l~~~~~~~~~D 121 (179)
++||=.|| +|+.-..+++++.. ....|+++|.++... ..++.++++|+++.+...++.+ .+|
T Consensus 4 k~vlVTGa-sg~IG~~la~~L~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~D 66 (267)
T 3rft_A 4 KRLLVTGA-AGQLGRVMRERLAP-----------MAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVA-----GCD 66 (267)
T ss_dssp EEEEEEST-TSHHHHHHHHHTGG-----------GEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHT-----TCS
T ss_pred CEEEEECC-CCHHHHHHHHHHHh-----------cCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHc-----CCC
Confidence 35665564 57777777777642 146899999887543 3579999999999887666553 689
Q ss_pred EEeeCCCCC
Q 030299 122 LVVCDGAPD 130 (179)
Q Consensus 122 ~VlsD~~~~ 130 (179)
+|++.++..
T Consensus 67 ~vi~~Ag~~ 75 (267)
T 3rft_A 67 GIVHLGGIS 75 (267)
T ss_dssp EEEECCSCC
T ss_pred EEEECCCCc
Confidence 999998764
No 323
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=90.50 E-value=5.4 Score=31.97 Aligned_cols=75 Identities=13% Similarity=0.136 Sum_probs=55.4
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCeeEEeccccchhhHHHHHhhcC
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFD 116 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----~~~~v~~i~gDi~~~~~~~~l~~~~~ 116 (179)
.|+++|=-|++.|.-.. +++++.. ...+|+.+|.++.. ...++..+++|+++.+..+++.+.+.
T Consensus 10 ~GK~alVTGas~GIG~a-ia~~la~-----------~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g 77 (242)
T 4b79_A 10 AGQQVLVTGGSSGIGAA-IAMQFAE-----------LGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALP 77 (242)
T ss_dssp TTCEEEEETTTSHHHHH-HHHHHHH-----------TTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCCHHHHH-HHHHHHH-----------CCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcC
Confidence 58888888888765443 3343321 25799999988742 23578899999999998888888874
Q ss_pred CCCccEEeeCCCC
Q 030299 117 GCKADLVVCDGAP 129 (179)
Q Consensus 117 ~~~~D~VlsD~~~ 129 (179)
+.|+++.+...
T Consensus 78 --~iDiLVNNAGi 88 (242)
T 4b79_A 78 --RLDVLVNNAGI 88 (242)
T ss_dssp --CCSEEEECCCC
T ss_pred --CCCEEEECCCC
Confidence 69999998764
No 324
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=90.36 E-value=1.6 Score=35.17 Aligned_cols=75 Identities=9% Similarity=-0.045 Sum_probs=53.0
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-----------CCCeeEEeccccchhhHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----------IEGVIQVQGDITNARTAE 109 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~-----------~~~v~~i~gDi~~~~~~~ 109 (179)
.+++||=.| |+|+.-..+++++.. .+..|+++|.++... ..++.++++|+++.+..+
T Consensus 4 ~~~~vlVTG-atG~iG~~l~~~L~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 71 (341)
T 3enk_A 4 TKGTILVTG-GAGYIGSHTAVELLA-----------HGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALA 71 (341)
T ss_dssp SSCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHH
T ss_pred CCcEEEEec-CCcHHHHHHHHHHHH-----------CCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHH
Confidence 456777666 557777777666532 147899999876431 247889999999988776
Q ss_pred HHHhhcCCCCccEEeeCCCCC
Q 030299 110 VVIRHFDGCKADLVVCDGAPD 130 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~~~ 130 (179)
++.+. ..+|+|++.++..
T Consensus 72 ~~~~~---~~~d~vih~A~~~ 89 (341)
T 3enk_A 72 RIFDA---HPITAAIHFAALK 89 (341)
T ss_dssp HHHHH---SCCCEEEECCCCC
T ss_pred HHHhc---cCCcEEEECcccc
Confidence 66653 3699999988653
No 325
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=90.28 E-value=0.6 Score=40.34 Aligned_cols=80 Identities=18% Similarity=0.033 Sum_probs=46.3
Q ss_pred CCEEEEEccCCChHHHHHHHHh----CCCCCC--CCCCCCCCCCeEEEEeCCCCC--------C------------CCCe
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKL----YLPAKL--SPDSREGDLPLIVAIDLQPMA--------P------------IEGV 95 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~----~~~~~~--~~~~~~~~~~~VvavD~~~~~--------~------------~~~v 95 (179)
.-+|+|||||.|..|..+...+ ...-+. .+ ...+...|+..|+-... + ..+.
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~--~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~ 130 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNE--LERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGS 130 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC------------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTS
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccC--CCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCc
Confidence 4689999999999999777652 110000 00 01235678888876421 0 0123
Q ss_pred eEEeccccchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 96 IQVQGDITNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 96 ~~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
.|+.|.....-. ..|+...+|+|.|..+
T Consensus 131 ~f~~gvpgSFy~-----rlfp~~S~d~v~Ss~a 158 (384)
T 2efj_A 131 CLIGAMPGSFYS-----RLFPEESMHFLHSCYC 158 (384)
T ss_dssp EEEEECCSCTTS-----CCSCTTCEEEEEEESC
T ss_pred eEEEecchhhhh-----ccCCCCceEEEEecce
Confidence 466665544211 1267789999999664
No 326
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=89.99 E-value=2.3 Score=33.20 Aligned_cols=79 Identities=11% Similarity=-0.075 Sum_probs=51.4
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCeeEEeccccchhhHHHHHhhcC--CC
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD--GC 118 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v~~i~gDi~~~~~~~~l~~~~~--~~ 118 (179)
.+++||=.|++ ||.-..+++++.. .+.+|+.+|.++.....++.++.+|+++.+..+++.+... -+
T Consensus 6 ~~k~vlVTGas-~giG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 73 (250)
T 2fwm_X 6 SGKNVWVTGAG-KGIGYATALAFVE-----------AGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETE 73 (250)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-----------TTCEEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH-----------CCCEEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35678877866 5555555554431 1478999998764322358888999999876555544221 13
Q ss_pred CccEEeeCCCCCC
Q 030299 119 KADLVVCDGAPDV 131 (179)
Q Consensus 119 ~~D~VlsD~~~~~ 131 (179)
++|+|+++.+...
T Consensus 74 ~id~lv~~Ag~~~ 86 (250)
T 2fwm_X 74 RLDALVNAAGILR 86 (250)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCCcCC
Confidence 6999999886543
No 327
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=89.60 E-value=1.4 Score=35.36 Aligned_cols=74 Identities=16% Similarity=0.007 Sum_probs=51.0
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----------CCCeeEEeccccchhhHHHH
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAEVV 111 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~----------~~~v~~i~gDi~~~~~~~~l 111 (179)
+++||=.|+ +|+.-..+++++.. .+..|+++|.++... ..++.++++|+++.+...++
T Consensus 3 ~~~vlVtGa-tG~iG~~l~~~L~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 70 (345)
T 2z1m_A 3 GKRALITGI-RGQDGAYLAKLLLE-----------KGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRT 70 (345)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHH
T ss_pred CCEEEEECC-CChHHHHHHHHHHH-----------CCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHH
Confidence 467777775 57777776665532 146899999876321 13788999999998766665
Q ss_pred HhhcCCCCccEEeeCCCCC
Q 030299 112 IRHFDGCKADLVVCDGAPD 130 (179)
Q Consensus 112 ~~~~~~~~~D~VlsD~~~~ 130 (179)
.+.. .+|+|++.++..
T Consensus 71 ~~~~---~~d~vih~A~~~ 86 (345)
T 2z1m_A 71 IEKV---QPDEVYNLAAQS 86 (345)
T ss_dssp HHHH---CCSEEEECCCCC
T ss_pred HHhc---CCCEEEECCCCc
Confidence 5432 589999988753
No 328
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=89.54 E-value=1.6 Score=35.54 Aligned_cols=73 Identities=23% Similarity=0.159 Sum_probs=51.3
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC---------CCCeeEEeccccchhhHHHHH
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---------IEGVIQVQGDITNARTAEVVI 112 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~---------~~~v~~i~gDi~~~~~~~~l~ 112 (179)
+++||=.| |+|+....+++++.. .+..|++++.++... ..++.++++|+++.+...++.
T Consensus 9 ~~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 76 (357)
T 1rkx_A 9 GKRVFVTG-HTGFKGGWLSLWLQT-----------MGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESI 76 (357)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHH
T ss_pred CCEEEEEC-CCchHHHHHHHHHHh-----------CCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHH
Confidence 56788777 467777777665532 146899999876421 247889999999987666655
Q ss_pred hhcCCCCccEEeeCCCC
Q 030299 113 RHFDGCKADLVVCDGAP 129 (179)
Q Consensus 113 ~~~~~~~~D~VlsD~~~ 129 (179)
+.. .+|+|++.++.
T Consensus 77 ~~~---~~d~vih~A~~ 90 (357)
T 1rkx_A 77 REF---QPEIVFHMAAQ 90 (357)
T ss_dssp HHH---CCSEEEECCSC
T ss_pred Hhc---CCCEEEECCCC
Confidence 432 58999998764
No 329
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=89.52 E-value=2.1 Score=33.88 Aligned_cols=79 Identities=22% Similarity=0.079 Sum_probs=52.0
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-CCCCeeEEeccccchhhHHHHHhhcC--C
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-PIEGVIQVQGDITNARTAEVVIRHFD--G 117 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-~~~~v~~i~gDi~~~~~~~~l~~~~~--~ 117 (179)
.+++||=-|++ ||.-..+++++.. .+..|+.+|.++.. ....+.++++|+++.+..+++.+... -
T Consensus 27 ~~k~vlVTGas-~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 94 (260)
T 3un1_A 27 QQKVVVITGAS-QGIGAGLVRAYRD-----------RNYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERF 94 (260)
T ss_dssp TCCEEEESSCS-SHHHHHHHHHHHH-----------TTCEEEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-----------CCCEEEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHHC
Confidence 46678877766 4555555554432 15789999987643 23478899999999876555544321 1
Q ss_pred CCccEEeeCCCCCC
Q 030299 118 CKADLVVCDGAPDV 131 (179)
Q Consensus 118 ~~~D~VlsD~~~~~ 131 (179)
+++|+|+++.+...
T Consensus 95 g~iD~lv~nAg~~~ 108 (260)
T 3un1_A 95 GRIDSLVNNAGVFL 108 (260)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 36999999886543
No 330
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=89.44 E-value=2.9 Score=33.37 Aligned_cols=76 Identities=13% Similarity=0.054 Sum_probs=54.5
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------C-CCCeeEEeccccchhhHHHHHh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P-IEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~-~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
+|++||=-|++ ||.-..+++++.. .+.+|+.+|.++.. . ..++.++++|+++.+..+++.+
T Consensus 15 ~gk~vlVTGas-~gIG~~~a~~L~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~ 82 (291)
T 3rd5_A 15 AQRTVVITGAN-SGLGAVTARELAR-----------RGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFAD 82 (291)
T ss_dssp TTCEEEEECCS-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHH
Confidence 46788877877 5555555555432 14789999987631 1 2368899999999988888887
Q ss_pred hcCCCCccEEeeCCCCC
Q 030299 114 HFDGCKADLVVCDGAPD 130 (179)
Q Consensus 114 ~~~~~~~D~VlsD~~~~ 130 (179)
.+ ..+|+|+++.+..
T Consensus 83 ~~--~~iD~lv~nAg~~ 97 (291)
T 3rd5_A 83 GV--SGADVLINNAGIM 97 (291)
T ss_dssp TC--CCEEEEEECCCCC
T ss_pred hc--CCCCEEEECCcCC
Confidence 66 4799999998753
No 331
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=89.41 E-value=2.2 Score=34.64 Aligned_cols=74 Identities=12% Similarity=0.056 Sum_probs=51.0
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCC-----CeEEEEeCCCCCC---CCCeeEEeccccchhhHHHHHhh
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL-----PLIVAIDLQPMAP---IEGVIQVQGDITNARTAEVVIRH 114 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~-----~~VvavD~~~~~~---~~~v~~i~gDi~~~~~~~~l~~~ 114 (179)
++||=.| |+|.....+++++-.. . ..|++++..+... ..+++++++|+++.+...++.+.
T Consensus 2 ~~vlVtG-atG~iG~~l~~~L~~~-----------g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 69 (364)
T 2v6g_A 2 SVALIVG-VTGIIGNSLAEILPLA-----------DTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSP 69 (364)
T ss_dssp EEEEEET-TTSHHHHHHHHHTTST-----------TCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTT
T ss_pred CEEEEEC-CCcHHHHHHHHHHHhC-----------CCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhc
Confidence 4566555 4588888888876421 2 5899999876432 35789999999998765555432
Q ss_pred cCCCCccEEeeCCCCC
Q 030299 115 FDGCKADLVVCDGAPD 130 (179)
Q Consensus 115 ~~~~~~D~VlsD~~~~ 130 (179)
. ..+|+|++.++..
T Consensus 70 ~--~~~d~vih~a~~~ 83 (364)
T 2v6g_A 70 L--TDVTHVFYVTWAN 83 (364)
T ss_dssp C--TTCCEEEECCCCC
T ss_pred C--CCCCEEEECCCCC
Confidence 2 1399999987643
No 332
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=89.40 E-value=5 Score=29.46 Aligned_cols=71 Identities=13% Similarity=0.026 Sum_probs=49.2
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCeeEEeccccchhhHHHHHhhcCCC
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIRHFDGC 118 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~----~~~v~~i~gDi~~~~~~~~l~~~~~~~ 118 (179)
++||=.|+ +|+.-..+++++.. ....|++++.++... ..+++++++|+++.+...++.+
T Consensus 4 ~~ilVtGa-tG~iG~~l~~~l~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 66 (206)
T 1hdo_A 4 KKIAIFGA-TGQTGLTTLAQAVQ-----------AGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVA----- 66 (206)
T ss_dssp CEEEEEST-TSHHHHHHHHHHHH-----------TTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHT-----
T ss_pred CEEEEEcC-CcHHHHHHHHHHHH-----------CCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHc-----
Confidence 56777765 56777766665532 146899999876421 3588999999999876555442
Q ss_pred CccEEeeCCCCC
Q 030299 119 KADLVVCDGAPD 130 (179)
Q Consensus 119 ~~D~VlsD~~~~ 130 (179)
.+|+|++..++.
T Consensus 67 ~~d~vi~~a~~~ 78 (206)
T 1hdo_A 67 GQDAVIVLLGTR 78 (206)
T ss_dssp TCSEEEECCCCT
T ss_pred CCCEEEECccCC
Confidence 479999987654
No 333
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=89.39 E-value=1.5 Score=35.02 Aligned_cols=77 Identities=18% Similarity=0.154 Sum_probs=50.8
Q ss_pred CCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCeeEEeccccchhhHHHHHhhcCCC
Q 030299 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGC 118 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v~~i~gDi~~~~~~~~l~~~~~~~ 118 (179)
..+..+||=.| |+|+....+++++.. .+..|++++.++.....++.++.+|+++.+...++.+. .
T Consensus 9 ~~~~~~vlVTG-atG~iG~~l~~~L~~-----------~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~---~ 73 (321)
T 2pk3_A 9 HHGSMRALITG-VAGFVGKYLANHLTE-----------QNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISD---I 73 (321)
T ss_dssp ----CEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHH---H
T ss_pred ccCcceEEEEC-CCChHHHHHHHHHHH-----------CCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHh---c
Confidence 35566777666 457777777666532 14689999987643112788999999998776665543 3
Q ss_pred CccEEeeCCCCC
Q 030299 119 KADLVVCDGAPD 130 (179)
Q Consensus 119 ~~D~VlsD~~~~ 130 (179)
++|+|++.++..
T Consensus 74 ~~d~vih~A~~~ 85 (321)
T 2pk3_A 74 KPDYIFHLAAKS 85 (321)
T ss_dssp CCSEEEECCSCC
T ss_pred CCCEEEEcCccc
Confidence 589999988653
No 334
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=88.99 E-value=4 Score=30.34 Aligned_cols=65 Identities=17% Similarity=0.245 Sum_probs=47.9
Q ss_pred EEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCeeEEeccccchhhHHHHHhhcCCCCccEE
Q 030299 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLV 123 (179)
Q Consensus 44 ~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v~~i~gDi~~~~~~~~l~~~~~~~~~D~V 123 (179)
+||=.|++ |+.-..+++++. . +..|++++.++. .+.+|+++.+..+++.+.+ +++|.|
T Consensus 5 ~vlVtGas-g~iG~~~~~~l~-~-----------g~~V~~~~r~~~-------~~~~D~~~~~~~~~~~~~~--~~~d~v 62 (202)
T 3d7l_A 5 KILLIGAS-GTLGSAVKERLE-K-----------KAEVITAGRHSG-------DVTVDITNIDSIKKMYEQV--GKVDAI 62 (202)
T ss_dssp EEEEETTT-SHHHHHHHHHHT-T-----------TSEEEEEESSSS-------SEECCTTCHHHHHHHHHHH--CCEEEE
T ss_pred EEEEEcCC-cHHHHHHHHHHH-C-----------CCeEEEEecCcc-------ceeeecCCHHHHHHHHHHh--CCCCEE
Confidence 67877864 677777777664 2 578999987653 4689999988777776655 469999
Q ss_pred eeCCCCC
Q 030299 124 VCDGAPD 130 (179)
Q Consensus 124 lsD~~~~ 130 (179)
++..+..
T Consensus 63 i~~ag~~ 69 (202)
T 3d7l_A 63 VSATGSA 69 (202)
T ss_dssp EECCCCC
T ss_pred EECCCCC
Confidence 9987643
No 335
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=88.88 E-value=1.8 Score=33.47 Aligned_cols=77 Identities=16% Similarity=0.225 Sum_probs=49.6
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCeeEEeccccchhhHHHHHhh----cCC
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRH----FDG 117 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v~~i~gDi~~~~~~~~l~~~----~~~ 117 (179)
+++||=.|++ |+.-..+++++.. .+..|+.+|.++......+.++++|+++.+..+++.+. +..
T Consensus 3 ~k~vlITGas-~gIG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 70 (236)
T 1ooe_A 3 SGKVIVYGGK-GALGSAILEFFKK-----------NGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQG 70 (236)
T ss_dssp CEEEEEETTT-SHHHHHHHHHHHH-----------TTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCC-cHHHHHHHHHHHH-----------CCCEEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 4467777765 5555555555432 14689999988754333466779999998765554442 322
Q ss_pred CCccEEeeCCCCC
Q 030299 118 CKADLVVCDGAPD 130 (179)
Q Consensus 118 ~~~D~VlsD~~~~ 130 (179)
+.+|+|++..+..
T Consensus 71 g~id~lv~~Ag~~ 83 (236)
T 1ooe_A 71 SQVDGVFCVAGGW 83 (236)
T ss_dssp CCEEEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 4799999988743
No 336
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=88.47 E-value=4.4 Score=33.02 Aligned_cols=73 Identities=16% Similarity=0.081 Sum_probs=46.9
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------C--------CCCeeEEeccccchhh
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------P--------IEGVIQVQGDITNART 107 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-------~--------~~~v~~i~gDi~~~~~ 107 (179)
++||=.|+ +|+....+++++-. .+..|+++|.++.. . ..++.++++|+++.+.
T Consensus 2 ~~vlVtGa-tG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 69 (372)
T 1db3_A 2 KVALITGV-TGQDGSYLAEFLLE-----------KGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSN 69 (372)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEECC---------------------CCEEECCCCSSCHHH
T ss_pred CEEEEECC-CChHHHHHHHHHHH-----------CCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHH
Confidence 45666664 57777776665531 14689999876421 1 1478889999999877
Q ss_pred HHHHHhhcCCCCccEEeeCCCCC
Q 030299 108 AEVVIRHFDGCKADLVVCDGAPD 130 (179)
Q Consensus 108 ~~~l~~~~~~~~~D~VlsD~~~~ 130 (179)
..++.+.. .+|+|++.++..
T Consensus 70 ~~~~~~~~---~~d~vih~A~~~ 89 (372)
T 1db3_A 70 LTRILREV---QPDEVYNLGAMS 89 (372)
T ss_dssp HHHHHHHH---CCSEEEECCCCC
T ss_pred HHHHHHhc---CCCEEEECCccc
Confidence 66655432 589999988754
No 337
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=88.31 E-value=3 Score=33.01 Aligned_cols=78 Identities=12% Similarity=0.116 Sum_probs=50.9
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCeeEEeccccchhhHHHHHhhcC--CC
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD--GC 118 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v~~i~gDi~~~~~~~~l~~~~~--~~ 118 (179)
.+++||=.|++ ||.-..+++++.. .+..|+.+|.++.. ..++.++++|+++.+..+++.+... -+
T Consensus 7 ~~k~vlVTGas-~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 73 (264)
T 2dtx_A 7 RDKVVIVTGAS-MGIGRAIAERFVD-----------EGSKVIDLSIHDPG-EAKYDHIECDVTNPDQVKASIDHIFKEYG 73 (264)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHH-----------TTCEEEEEESSCCC-SCSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-----------CCCEEEEEecCccc-CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 35678877876 4555555554421 14689999987654 3467889999999876555444221 13
Q ss_pred CccEEeeCCCCCC
Q 030299 119 KADLVVCDGAPDV 131 (179)
Q Consensus 119 ~~D~VlsD~~~~~ 131 (179)
.+|+|+++.+...
T Consensus 74 ~iD~lv~~Ag~~~ 86 (264)
T 2dtx_A 74 SISVLVNNAGIES 86 (264)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 6999999886543
No 338
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=88.15 E-value=2.2 Score=35.72 Aligned_cols=70 Identities=17% Similarity=0.028 Sum_probs=50.4
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---CCCCeeEEeccccchhhHHHHHhhcCC
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---PIEGVIQVQGDITNARTAEVVIRHFDG 117 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---~~~~v~~i~gDi~~~~~~~~l~~~~~~ 117 (179)
+.++|+=||| |.....+++.+.. ...|..+|.+... ..+.+..++.|+.|.+...++.
T Consensus 15 ~~mkilvlGa--G~vG~~~~~~L~~------------~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~----- 75 (365)
T 3abi_A 15 RHMKVLILGA--GNIGRAIAWDLKD------------EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVM----- 75 (365)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHTT------------TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHH-----
T ss_pred CccEEEEECC--CHHHHHHHHHHhc------------CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHH-----
Confidence 4578999998 8888888887753 4678888887632 1345677889999987655544
Q ss_pred CCccEEeeCCCC
Q 030299 118 CKADLVVCDGAP 129 (179)
Q Consensus 118 ~~~D~VlsD~~~ 129 (179)
.++|+|++-.+|
T Consensus 76 ~~~DvVi~~~p~ 87 (365)
T 3abi_A 76 KEFELVIGALPG 87 (365)
T ss_dssp TTCSEEEECCCG
T ss_pred hCCCEEEEecCC
Confidence 258999986654
No 339
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=88.15 E-value=2 Score=34.55 Aligned_cols=75 Identities=11% Similarity=0.011 Sum_probs=51.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~ 109 (179)
.++++||=.|+ +|+.-..+++++-. .+..|++++.++.. ...++.++.+|+++.+...
T Consensus 12 ~~~~~vlVTGa-tG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 79 (335)
T 1rpn_A 12 SMTRSALVTGI-TGQDGAYLAKLLLE-----------KGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQ 79 (335)
T ss_dssp ---CEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHH
T ss_pred ccCCeEEEECC-CChHHHHHHHHHHH-----------CCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHH
Confidence 46788987775 57777777665532 14689999987642 1247889999999987766
Q ss_pred HHHhhcCCCCccEEeeCCCC
Q 030299 110 VVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~~ 129 (179)
++.+.. .+|+|++.++.
T Consensus 80 ~~~~~~---~~d~Vih~A~~ 96 (335)
T 1rpn_A 80 RAVIKA---QPQEVYNLAAQ 96 (335)
T ss_dssp HHHHHH---CCSEEEECCSC
T ss_pred HHHHHc---CCCEEEECccc
Confidence 655432 58999998764
No 340
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=87.89 E-value=2.4 Score=34.35 Aligned_cols=78 Identities=15% Similarity=0.133 Sum_probs=51.8
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~~ 110 (179)
.+++||=.|| +|.....+++++-.. +....|+++|..+.. ..++++++++|+++.+...+
T Consensus 23 ~~~~vlVtGa-tG~iG~~l~~~L~~~---------g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~ 92 (346)
T 4egb_A 23 NAMNILVTGG-AGFIGSNFVHYMLQS---------YETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEH 92 (346)
T ss_dssp -CEEEEEETT-TSHHHHHHHHHHHHH---------CTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHH
T ss_pred CCCeEEEECC-ccHHHHHHHHHHHhh---------CCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHH
Confidence 4668887774 576666666554210 113689999977531 12589999999999887666
Q ss_pred HHhhcCCCCccEEeeCCCCCC
Q 030299 111 VIRHFDGCKADLVVCDGAPDV 131 (179)
Q Consensus 111 l~~~~~~~~~D~VlsD~~~~~ 131 (179)
+.+. ..+|+|++.++...
T Consensus 93 ~~~~---~~~d~Vih~A~~~~ 110 (346)
T 4egb_A 93 VIKE---RDVQVIVNFAAESH 110 (346)
T ss_dssp HHHH---HTCCEEEECCCCC-
T ss_pred HHhh---cCCCEEEECCcccc
Confidence 6543 35899999887543
No 341
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=87.58 E-value=2 Score=33.58 Aligned_cols=78 Identities=12% Similarity=0.132 Sum_probs=49.9
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------CCCCCeeEEeccccchhhHHHHHhhc
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------APIEGVIQVQGDITNARTAEVVIRHF 115 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~------~~~~~v~~i~gDi~~~~~~~~l~~~~ 115 (179)
+++||=-|++.| .-..+++++.. .+..|+.+|.++. ...+++.++++|+++.+..+++.+..
T Consensus 2 ~k~vlVTGas~g-IG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 69 (247)
T 3dii_A 2 NRGVIVTGGGHG-IGKQICLDFLE-----------AGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYA 69 (247)
T ss_dssp CCEEEEESTTSH-HHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCCH-HHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHhcccCCeEEeeCCCHHHHHHHHHHH
Confidence 356777776654 44444444421 1478999998763 23567889999999987655554432
Q ss_pred CC--CCccEEeeCCCCCC
Q 030299 116 DG--CKADLVVCDGAPDV 131 (179)
Q Consensus 116 ~~--~~~D~VlsD~~~~~ 131 (179)
.+ +++|+++++.+...
T Consensus 70 ~~~~g~id~lv~nAg~~~ 87 (247)
T 3dii_A 70 MEKLQRIDVLVNNACRGS 87 (247)
T ss_dssp HHHHSCCCEEEECCC-CC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 11 36999999886443
No 342
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=87.52 E-value=3.8 Score=33.30 Aligned_cols=76 Identities=14% Similarity=0.059 Sum_probs=49.2
Q ss_pred CCEEEEEccCCChHHHHHHHH---hCCCCCCCCCCCCCCCCeEEEEeCCCCC----------------------------
Q 030299 42 VKRVVDLCAAPGSWSQVLSRK---LYLPAKLSPDSREGDLPLIVAIDLQPMA---------------------------- 90 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~---~~~~~~~~~~~~~~~~~~VvavD~~~~~---------------------------- 90 (179)
...|+++|+-.|+-+..++.. ..+ .+...+|+++|.-..-
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~---------~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l 140 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEP---------YNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYL 140 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCT---------TCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHH
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcc---------cCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHH
Confidence 448999999999988886653 111 0124577777743210
Q ss_pred -------------C--CCCeeEEeccccchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 91 -------------P--IEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 91 -------------~--~~~v~~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
+ ..++.++.|++.+ ++..+....+..++|+|..|+.
T Consensus 141 ~~~l~~~~~~~~~g~~~~~i~li~G~~~d--TL~~~l~~~~~~~~dlv~ID~D 191 (257)
T 3tos_A 141 KEVLDAHECSDFFGHVTQRSVLVEGDVRE--TVPRYLAENPQTVIALAYFDLD 191 (257)
T ss_dssp HHHHHHHHTTSTTTTSCCSEEEEESCHHH--HHHHHHHHCTTCCEEEEEECCC
T ss_pred HHHHHHHhhhhhcCCCCCcEEEEEecHHH--HHHHHHHhCCCCceEEEEEcCc
Confidence 1 1467888888865 4444554455567999999984
No 343
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=87.47 E-value=3.1 Score=31.98 Aligned_cols=76 Identities=18% Similarity=0.133 Sum_probs=51.7
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCeeEEeccccchhhHHHHHhh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRH 114 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~~~v~~i~gDi~~~~~~~~l~~~ 114 (179)
++++||=.|++ |+.-..+++++.. .+..|+.++.++.. ..++++++++|+++.+..+++.+.
T Consensus 6 ~~k~vlITGas-ggiG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 73 (244)
T 3d3w_A 6 AGRRVLVTGAG-KGIGRGTVQALHA-----------TGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGS 73 (244)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTT
T ss_pred CCcEEEEECCC-cHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHH
Confidence 46678877765 5555555554431 14689999877521 135778889999998877777654
Q ss_pred cCCCCccEEeeCCCCC
Q 030299 115 FDGCKADLVVCDGAPD 130 (179)
Q Consensus 115 ~~~~~~D~VlsD~~~~ 130 (179)
+ +++|+|++..+..
T Consensus 74 ~--~~id~vi~~Ag~~ 87 (244)
T 3d3w_A 74 V--GPVDLLVNNAAVA 87 (244)
T ss_dssp C--CCCCEEEECCCCC
T ss_pred c--CCCCEEEECCccC
Confidence 3 3689999987643
No 344
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=87.35 E-value=1.9 Score=34.80 Aligned_cols=73 Identities=18% Similarity=0.146 Sum_probs=49.9
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCC-------CeEEEEeCCCCC----CCCCeeEEeccccchhhHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL-------PLIVAIDLQPMA----PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~-------~~VvavD~~~~~----~~~~v~~i~gDi~~~~~~~ 109 (179)
.+++||=.|+ +|+.-..+++++-. .+ ..|+++|..+.. ...++.++++|+++.+...
T Consensus 13 ~~~~vlVtGa-~G~iG~~l~~~L~~-----------~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 80 (342)
T 2hrz_A 13 QGMHIAIIGA-AGMVGRKLTQRLVK-----------DGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAE 80 (342)
T ss_dssp SCEEEEEETT-TSHHHHHHHHHHHH-----------HCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHH
T ss_pred cCCEEEEECC-CcHHHHHHHHHHHh-----------cCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHH
Confidence 4567887775 47676666665532 02 479999987632 1346889999999987665
Q ss_pred HHHhhcCCCCccEEeeCCCC
Q 030299 110 VVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~~ 129 (179)
++.+ ..+|+|++.++.
T Consensus 81 ~~~~----~~~d~vih~A~~ 96 (342)
T 2hrz_A 81 KLVE----ARPDVIFHLAAI 96 (342)
T ss_dssp HHHH----TCCSEEEECCCC
T ss_pred HHHh----cCCCEEEECCcc
Confidence 5543 369999998865
No 345
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=87.26 E-value=3.7 Score=31.31 Aligned_cols=77 Identities=14% Similarity=0.037 Sum_probs=51.2
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCC--CeEEEEeCCCCCC-------CCCeeEEeccccchhhHHHHH
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL--PLIVAIDLQPMAP-------IEGVIQVQGDITNARTAEVVI 112 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~--~~VvavD~~~~~~-------~~~v~~i~gDi~~~~~~~~l~ 112 (179)
+.+||=.|++ |+.-..+++++.. .. ..|+++|.++... ..++.++++|+++.+..+++.
T Consensus 3 ~k~vlItGas-ggiG~~la~~l~~-----------~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~ 70 (250)
T 1yo6_A 3 PGSVVVTGAN-RGIGLGLVQQLVK-----------DKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFV 70 (250)
T ss_dssp CSEEEESSCS-SHHHHHHHHHHHT-----------CTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHH
T ss_pred CCEEEEecCC-chHHHHHHHHHHh-----------cCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHH
Confidence 4567766754 6677777666642 14 6899999876321 246889999999987655555
Q ss_pred hhc----CCCCccEEeeCCCCC
Q 030299 113 RHF----DGCKADLVVCDGAPD 130 (179)
Q Consensus 113 ~~~----~~~~~D~VlsD~~~~ 130 (179)
+.+ ....+|+|++..+..
T Consensus 71 ~~~~~~~g~~~id~li~~Ag~~ 92 (250)
T 1yo6_A 71 SKVGEIVGSDGLSLLINNAGVL 92 (250)
T ss_dssp HHHHHHHGGGCCCEEEECCCCC
T ss_pred HHHHHhcCCCCCcEEEECCccc
Confidence 432 212689999988643
No 346
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=87.13 E-value=0.62 Score=33.19 Aligned_cols=69 Identities=19% Similarity=0.079 Sum_probs=47.6
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCeeEEeccccchhhHHHHHhhcCC
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFDG 117 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----~~~~v~~i~gDi~~~~~~~~l~~~~~~ 117 (179)
.++|+=+|+ |.+...+++.+.. .+..|+++|.++.. ...++.++.+|.++.+..++. .-
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~-----------~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~----~~ 68 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTA-----------AGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSL----DL 68 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHH-----------TTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHS----CC
T ss_pred CCEEEEECC--CHHHHHHHHHHHH-----------CCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhC----Cc
Confidence 357888888 6677777776532 14689999998742 124788899999998765432 33
Q ss_pred CCccEEeeCC
Q 030299 118 CKADLVVCDG 127 (179)
Q Consensus 118 ~~~D~VlsD~ 127 (179)
..+|.|+.-.
T Consensus 69 ~~~d~vi~~~ 78 (141)
T 3llv_A 69 EGVSAVLITG 78 (141)
T ss_dssp TTCSEEEECC
T ss_pred ccCCEEEEec
Confidence 4689988743
No 347
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=87.07 E-value=3.6 Score=31.53 Aligned_cols=76 Identities=17% Similarity=0.082 Sum_probs=52.5
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCeeEEeccccchhhHHHHHhh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRH 114 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~~~v~~i~gDi~~~~~~~~l~~~ 114 (179)
++++||=.|++ |+.-..+++++.. .+..|+++|.++.. ..++++++.+|+++.+..+++.+.
T Consensus 6 ~~~~vlVTGas-ggiG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 73 (244)
T 1cyd_A 6 SGLRALVTGAG-KGIGRDTVKALHA-----------SGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGG 73 (244)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTT
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHH
Confidence 45678877765 5666666655532 14689999987521 135788889999998877776653
Q ss_pred cCCCCccEEeeCCCCC
Q 030299 115 FDGCKADLVVCDGAPD 130 (179)
Q Consensus 115 ~~~~~~D~VlsD~~~~ 130 (179)
+ +++|+|++..+..
T Consensus 74 ~--~~id~vi~~Ag~~ 87 (244)
T 1cyd_A 74 I--GPVDLLVNNAALV 87 (244)
T ss_dssp C--CCCSEEEECCCCC
T ss_pred c--CCCCEEEECCccc
Confidence 3 3689999988644
No 348
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=87.06 E-value=4.5 Score=31.34 Aligned_cols=76 Identities=13% Similarity=0.076 Sum_probs=51.6
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----CCCCeeEEeccccchhhHHHHHhhcC
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----PIEGVIQVQGDITNARTAEVVIRHFD 116 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----~~~~v~~i~gDi~~~~~~~~l~~~~~ 116 (179)
+++||=.|++ ||.-..+++++.. ....|+.+|.++.. .+.++.++++|+++.+..+++.+.+
T Consensus 6 ~k~vlVTGas-~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~- 72 (246)
T 2ag5_A 6 GKVIILTAAA-QGIGQAAALAFAR-----------EGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEV- 72 (246)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHC-
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHh-
Confidence 5677777765 4555555554431 14689999987521 2337889999999988777776655
Q ss_pred CCCccEEeeCCCCCC
Q 030299 117 GCKADLVVCDGAPDV 131 (179)
Q Consensus 117 ~~~~D~VlsD~~~~~ 131 (179)
+++|+|+++.+...
T Consensus 73 -~~id~lv~~Ag~~~ 86 (246)
T 2ag5_A 73 -ERLDVLFNVAGFVH 86 (246)
T ss_dssp -SCCSEEEECCCCCC
T ss_pred -CCCCEEEECCccCC
Confidence 36999999886543
No 349
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=86.90 E-value=8.2 Score=30.66 Aligned_cols=73 Identities=14% Similarity=0.002 Sum_probs=47.6
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-CCCCeeEEeccccchhhHHHHHhhcCCCCcc
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-PIEGVIQVQGDITNARTAEVVIRHFDGCKAD 121 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-~~~~v~~i~gDi~~~~~~~~l~~~~~~~~~D 121 (179)
++||=.|+ +|..-..+++++.. .+..|++++.++-. .+.+++++.+|++ .+...++. . ++|
T Consensus 3 ~~vlVtGa-tG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~Dl~-~~~~~~~~---~--~~d 64 (311)
T 3m2p_A 3 LKIAVTGG-TGFLGQYVVESIKN-----------DGNTPIILTRSIGNKAINDYEYRVSDYT-LEDLINQL---N--DVD 64 (311)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEESCCC-----CCEEEECCCC-HHHHHHHT---T--TCS
T ss_pred CEEEEECC-CcHHHHHHHHHHHh-----------CCCEEEEEeCCCCcccCCceEEEEcccc-HHHHHHhh---c--CCC
Confidence 46666554 67777777666532 14689999987422 2458999999999 76554443 2 799
Q ss_pred EEeeCCCCCCCC
Q 030299 122 LVVCDGAPDVTG 133 (179)
Q Consensus 122 ~VlsD~~~~~~g 133 (179)
+|++-+++....
T Consensus 65 ~Vih~a~~~~~~ 76 (311)
T 3m2p_A 65 AVVHLAATRGSQ 76 (311)
T ss_dssp EEEECCCCCCSS
T ss_pred EEEEccccCCCC
Confidence 999988754433
No 350
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=86.87 E-value=3.8 Score=32.03 Aligned_cols=79 Identities=20% Similarity=0.161 Sum_probs=50.6
Q ss_pred CCCEEEEEcc-CCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhH
Q 030299 41 GVKRVVDLCA-APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 41 ~g~~VlDLga-gpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~ 108 (179)
.+++||=.|+ |.|.-...+.+... .+..|+.+|.++.. ...++.++++|+++.+..
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~------------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v 88 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALL------------EGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAV 88 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHH------------TTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHH------------CCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHH
Confidence 4678888888 45654433332222 14789999987621 124788999999998765
Q ss_pred HHHHhhcC--CCCccEEeeCCCCCC
Q 030299 109 EVVIRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 109 ~~l~~~~~--~~~~D~VlsD~~~~~ 131 (179)
+++.+... -+++|+|+++.+...
T Consensus 89 ~~~~~~~~~~~g~id~li~~Ag~~~ 113 (266)
T 3o38_A 89 DALITQTVEKAGRLDVLVNNAGLGG 113 (266)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHhCCCcEEEECCCcCC
Confidence 55554321 136899999987543
No 351
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=86.78 E-value=2.8 Score=34.09 Aligned_cols=71 Identities=20% Similarity=0.089 Sum_probs=50.2
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC---------------CCCeeEEeccccchh
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---------------IEGVIQVQGDITNAR 106 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~---------------~~~v~~i~gDi~~~~ 106 (179)
+++||=.|| +|+....+++++.. .+..|++++..+... ..++.++++|+++.+
T Consensus 27 ~~~vlVtGa-tG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 94 (352)
T 1sb8_A 27 PKVWLITGV-AGFIGSNLLETLLK-----------LDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLD 94 (352)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHH
T ss_pred CCeEEEECC-CcHHHHHHHHHHHH-----------CCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHH
Confidence 567887775 57777777665532 146899999865310 158899999999987
Q ss_pred hHHHHHhhcCCCCccEEeeCCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
...++.+ .+|+|++..+.
T Consensus 95 ~~~~~~~-----~~d~vih~A~~ 112 (352)
T 1sb8_A 95 DCNNACA-----GVDYVLHQAAL 112 (352)
T ss_dssp HHHHHHT-----TCSEEEECCSC
T ss_pred HHHHHhc-----CCCEEEECCcc
Confidence 6555542 68999998764
No 352
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=86.57 E-value=0.65 Score=39.22 Aligned_cols=74 Identities=19% Similarity=0.138 Sum_probs=46.0
Q ss_pred CCCCCEEEEEccCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCeeEEeccccchh-hHHHHH
Q 030299 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNAR-TAEVVI 112 (179)
Q Consensus 39 l~~g~~VlDLgagp-Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----~~~~v~~i~gDi~~~~-~~~~l~ 112 (179)
+++|++||-+|||+ |..+..+++..+ ...|+++|.++.+ .--|+..+ |..+.+ ..+++.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~i--~~~~~~~~~~~v~ 247 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLG-------------AAVVIVGDLNPARLAHAKAQGFEIA--DLSLDTPLHEQIA 247 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEEESCHHHHHHHHHTTCEEE--ETTSSSCHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCC-------------CCeEEEEcCCHHHHHHHHHcCCcEE--ccCCcchHHHHHH
Confidence 47899999999876 666666777664 2379999988742 11255433 333222 234454
Q ss_pred hhcCCCCccEEeeCC
Q 030299 113 RHFDGCKADLVVCDG 127 (179)
Q Consensus 113 ~~~~~~~~D~VlsD~ 127 (179)
+...+.++|+|+-..
T Consensus 248 ~~t~g~g~Dvvid~~ 262 (398)
T 1kol_A 248 ALLGEPEVDCAVDAV 262 (398)
T ss_dssp HHHSSSCEEEEEECC
T ss_pred HHhCCCCCCEEEECC
Confidence 444455799988643
No 353
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=86.39 E-value=2 Score=32.85 Aligned_cols=75 Identities=17% Similarity=0.137 Sum_probs=50.2
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCeeEEeccccchhhHHHHHhhcC-CCCc
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD-GCKA 120 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v~~i~gDi~~~~~~~~l~~~~~-~~~~ 120 (179)
+++||=.|++ |+.-..+++++.. .+..|+++|.++. ...+.++++|+++.+..+++.+... ...+
T Consensus 2 ~k~vlVtGas-ggiG~~la~~l~~-----------~G~~V~~~~r~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 67 (242)
T 1uay_A 2 ERSALVTGGA-SGLGRAAALALKA-----------RGYRVVVLDLRRE--GEDLIYVEGDVTREEDVRRAVARAQEEAPL 67 (242)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHH-----------HTCEEEEEESSCC--SSSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHH-----------CCCEEEEEccCcc--ccceEEEeCCCCCHHHHHHHHHHHHhhCCc
Confidence 4567777765 5666555554421 1468999998775 4567889999999876666554321 1268
Q ss_pred cEEeeCCCCC
Q 030299 121 DLVVCDGAPD 130 (179)
Q Consensus 121 D~VlsD~~~~ 130 (179)
|.|++..+..
T Consensus 68 d~li~~ag~~ 77 (242)
T 1uay_A 68 FAVVSAAGVG 77 (242)
T ss_dssp EEEEECCCCC
T ss_pred eEEEEccccc
Confidence 9999987643
No 354
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=86.37 E-value=4 Score=32.47 Aligned_cols=78 Identities=13% Similarity=0.080 Sum_probs=51.8
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHHHH
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEVV 111 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~~l 111 (179)
+++||=.|++ |+....+++++.. ....|+.++.++.. .-.++.++++|+++.+..+++
T Consensus 44 ~k~vlITGas-ggIG~~la~~L~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~ 111 (285)
T 2c07_A 44 NKVALVTGAG-RGIGREIAKMLAK-----------SVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEV 111 (285)
T ss_dssp SCEEEEESTT-SHHHHHHHHHHTT-----------TSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHH-----------cCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHH
Confidence 5678877766 6677777776643 24688888865421 123578889999998766655
Q ss_pred HhhcC--CCCccEEeeCCCCCC
Q 030299 112 IRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 112 ~~~~~--~~~~D~VlsD~~~~~ 131 (179)
.+... -+++|+|++..+...
T Consensus 112 ~~~~~~~~~~id~li~~Ag~~~ 133 (285)
T 2c07_A 112 INKILTEHKNVDILVNNAGITR 133 (285)
T ss_dssp HHHHHHHCSCCCEEEECCCCCC
T ss_pred HHHHHHhcCCCCEEEECCCCCC
Confidence 54321 136899999886543
No 355
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=86.23 E-value=0.7 Score=36.68 Aligned_cols=79 Identities=15% Similarity=0.059 Sum_probs=53.6
Q ss_pred CCCEEEEEcc-CCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------CC-CCeeEEeccccchhhHHHH
Q 030299 41 GVKRVVDLCA-APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------PI-EGVIQVQGDITNARTAEVV 111 (179)
Q Consensus 41 ~g~~VlDLga-gpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-------~~-~~v~~i~gDi~~~~~~~~l 111 (179)
.+++||=.|+ |.||.-..+++++.. ....|+.+|.++.. .+ ..+.++++|+++.+..+++
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 74 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQE-----------QGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASL 74 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHH-----------TTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHH-----------CCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHH
Confidence 3567888898 477777777766532 14789999987621 11 3577889999998765555
Q ss_pred Hhh----cC-CCCccEEeeCCCCC
Q 030299 112 IRH----FD-GCKADLVVCDGAPD 130 (179)
Q Consensus 112 ~~~----~~-~~~~D~VlsD~~~~ 130 (179)
.+. +. ..++|+|+++.+..
T Consensus 75 ~~~~~~~~g~~~~iD~lv~nAg~~ 98 (269)
T 2h7i_A 75 AGRVTEAIGAGNKLDGVVHSIGFM 98 (269)
T ss_dssp HHHHHHHHCTTCCEEEEEECCCCC
T ss_pred HHHHHHHhCCCCCceEEEECCccC
Confidence 543 32 12699999988643
No 356
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=86.12 E-value=2.9 Score=33.88 Aligned_cols=72 Identities=21% Similarity=0.207 Sum_probs=51.0
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC---------C------CCeeEEeccccch
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---------I------EGVIQVQGDITNA 105 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~---------~------~~v~~i~gDi~~~ 105 (179)
.+++||=.|+ +|.....+++++-. .+..|++++..+... . .+++++++|+++.
T Consensus 24 ~~~~vlVtGa-tG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 91 (351)
T 3ruf_A 24 SPKTWLITGV-AGFIGSNLLEKLLK-----------LNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDL 91 (351)
T ss_dssp SCCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCH
T ss_pred CCCeEEEECC-CcHHHHHHHHHHHH-----------CCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCH
Confidence 4578887774 57777777666532 147899999876421 1 6899999999998
Q ss_pred hhHHHHHhhcCCCCccEEeeCCCC
Q 030299 106 RTAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 106 ~~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
+...++.+ ++|+|++-++.
T Consensus 92 ~~~~~~~~-----~~d~Vih~A~~ 110 (351)
T 3ruf_A 92 TTCEQVMK-----GVDHVLHQAAL 110 (351)
T ss_dssp HHHHHHTT-----TCSEEEECCCC
T ss_pred HHHHHHhc-----CCCEEEECCcc
Confidence 76554432 69999998764
No 357
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=86.11 E-value=5.8 Score=31.63 Aligned_cols=79 Identities=10% Similarity=0.068 Sum_probs=51.8
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--C---------------CCCeeEEecccc
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--P---------------IEGVIQVQGDIT 103 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~--~---------------~~~v~~i~gDi~ 103 (179)
.++++|=-|++.| .-..+++++.. .+.+|+.+|.++.. . ...+.++++|++
T Consensus 8 ~~k~vlVTGas~G-IG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 75 (285)
T 3sc4_A 8 RGKTMFISGGSRG-IGLAIAKRVAA-----------DGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIR 75 (285)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHT-----------TTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTT
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHH-----------CCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCC
Confidence 4667888887754 55555555532 25789999987641 1 135788999999
Q ss_pred chhhHHHHHhhcC--CCCccEEeeCCCCCC
Q 030299 104 NARTAEVVIRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 104 ~~~~~~~l~~~~~--~~~~D~VlsD~~~~~ 131 (179)
+.+..+++.+... -+++|+++++.+...
T Consensus 76 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~ 105 (285)
T 3sc4_A 76 DGDAVAAAVAKTVEQFGGIDICVNNASAIN 105 (285)
T ss_dssp SHHHHHHHHHHHHHHHSCCSEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 9876555554321 136999999887543
No 358
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=85.97 E-value=0.61 Score=38.98 Aligned_cols=73 Identities=14% Similarity=0.136 Sum_probs=43.3
Q ss_pred CCCCCEEEEEccCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCeeEEeccccchhhHHHHHh
Q 030299 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 39 l~~g~~VlDLgagp-Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~----~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
+++|++||-+|||+ |..+..+++..+ ...|+++|.++.+. --|...+ .|..+.+..+++.+
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~~ 253 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCG-------------ASIIIAVDIVESRLELAKQLGATHV-INSKTQDPVAAIKE 253 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHT-------------CSEEEEEESCHHHHHHHHHHTCSEE-EETTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCeEEEECCCHHHHHHHHHcCCCEE-ecCCccCHHHHHHH
Confidence 47899999999877 666667777765 23799999887320 0132211 12222233344444
Q ss_pred hcCCCCccEEeeC
Q 030299 114 HFDGCKADLVVCD 126 (179)
Q Consensus 114 ~~~~~~~D~VlsD 126 (179)
...+ ++|+|+-.
T Consensus 254 ~~~g-g~D~vid~ 265 (371)
T 1f8f_A 254 ITDG-GVNFALES 265 (371)
T ss_dssp HTTS-CEEEEEEC
T ss_pred hcCC-CCcEEEEC
Confidence 3344 78888753
No 359
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=85.93 E-value=0.42 Score=40.92 Aligned_cols=77 Identities=14% Similarity=0.055 Sum_probs=46.2
Q ss_pred CCEEEEEccCCChHHHHHHHH--------hCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCC------CeeEEecc
Q 030299 42 VKRVVDLCAAPGSWSQVLSRK--------LYLPAKLSPDSREGDLPLIVAIDLQPMA------PIE------GVIQVQGD 101 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~--------~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~~------~v~~i~gD 101 (179)
.-+|+||||+.|.-|..+... ... .+. ...+...|+..|+-... .++ +..|+.|.
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~----~~~-~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gv 126 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKK----MGR-ENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGV 126 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHS----SSC-SSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEE
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHh----cCC-CCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEec
Confidence 457999999999888754332 100 000 01235789999987742 222 34566665
Q ss_pred ccchhhHHHHHhhcCCCCccEEeeCCC
Q 030299 102 ITNARTAEVVIRHFDGCKADLVVCDGA 128 (179)
Q Consensus 102 i~~~~~~~~l~~~~~~~~~D~VlsD~~ 128 (179)
....-. ..|+...+|+|.|..+
T Consensus 127 pgSFy~-----rlfp~~S~d~v~Ss~a 148 (359)
T 1m6e_X 127 PGSFYG-----RLFPRNTLHFIHSSYS 148 (359)
T ss_dssp ESCSSS-----CCSCTTCBSCEEEESC
T ss_pred chhhhh-----ccCCCCceEEEEehhh
Confidence 544211 1267889999999664
No 360
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=85.79 E-value=4 Score=33.76 Aligned_cols=73 Identities=15% Similarity=-0.014 Sum_probs=51.4
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCeeEEeccccchhhHHHHHhhcC
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIRHFD 116 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~----~~~v~~i~gDi~~~~~~~~l~~~~~ 116 (179)
.+++||=.|+ +|+.-..+++++-. .+..|++++.++... ..+++++++|+++.+...++.+
T Consensus 28 ~~~~vlVtGa-tG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (379)
T 2c5a_A 28 ENLKISITGA-GGFIASHIARRLKH-----------EGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTE--- 92 (379)
T ss_dssp SCCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHT---
T ss_pred cCCeEEEECC-ccHHHHHHHHHHHH-----------CCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhC---
Confidence 3568888775 57777777665531 146899999876432 2478899999999876555442
Q ss_pred CCCccEEeeCCCCC
Q 030299 117 GCKADLVVCDGAPD 130 (179)
Q Consensus 117 ~~~~D~VlsD~~~~ 130 (179)
.+|+|++..+..
T Consensus 93 --~~d~Vih~A~~~ 104 (379)
T 2c5a_A 93 --GVDHVFNLAADM 104 (379)
T ss_dssp --TCSEEEECCCCC
T ss_pred --CCCEEEECceec
Confidence 689999987653
No 361
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=85.65 E-value=5.4 Score=30.60 Aligned_cols=69 Identities=19% Similarity=0.146 Sum_probs=47.9
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCC-CeEEEEeCCCCC----CCCCeeEEeccccchhhHHHHHhhcCC
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL-PLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFDG 117 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~-~~VvavD~~~~~----~~~~v~~i~gDi~~~~~~~~l~~~~~~ 117 (179)
++||=.| |+|+.-..+++++.. .. ..|++++.++.. ...++.++++|+++.+..+++.+
T Consensus 24 k~vlVtG-atG~iG~~l~~~L~~-----------~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 87 (236)
T 3qvo_A 24 KNVLILG-AGGQIARHVINQLAD-----------KQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQ---- 87 (236)
T ss_dssp EEEEEET-TTSHHHHHHHHHHTT-----------CTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHT----
T ss_pred cEEEEEe-CCcHHHHHHHHHHHh-----------CCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhc----
Confidence 3566555 457777777777653 13 589999887632 12489999999999876655542
Q ss_pred CCccEEeeCCC
Q 030299 118 CKADLVVCDGA 128 (179)
Q Consensus 118 ~~~D~VlsD~~ 128 (179)
.+|+|++..+
T Consensus 88 -~~D~vv~~a~ 97 (236)
T 3qvo_A 88 -GQDIVYANLT 97 (236)
T ss_dssp -TCSEEEEECC
T ss_pred -CCCEEEEcCC
Confidence 5799998764
No 362
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=85.56 E-value=0.75 Score=38.15 Aligned_cols=73 Identities=21% Similarity=0.156 Sum_probs=44.7
Q ss_pred CCCCCEEEEEccCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCeeEEeccccchhhHHHHHh
Q 030299 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 39 l~~g~~VlDLgagp-Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~----~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
+++|++||=+|||+ |..+..+++..+ ..+|+++|.++.+. --|+..+ -|..+.+..+++.+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~G-------------a~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~v~~ 229 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLG-------------AGRIFAVGSRKHCCDIALEYGATDI-INYKNGDIVEQILK 229 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTT-------------CSSEEEECCCHHHHHHHHHHTCCEE-ECGGGSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CcEEEEECCCHHHHHHHHHhCCceE-EcCCCcCHHHHHHH
Confidence 47899999999866 555555666554 23799999887420 0133211 23334444555666
Q ss_pred hcCCCCccEEee
Q 030299 114 HFDGCKADLVVC 125 (179)
Q Consensus 114 ~~~~~~~D~Vls 125 (179)
...+.++|+|+-
T Consensus 230 ~t~g~g~D~v~d 241 (352)
T 3fpc_A 230 ATDGKGVDKVVI 241 (352)
T ss_dssp HTTTCCEEEEEE
T ss_pred HcCCCCCCEEEE
Confidence 556667999885
No 363
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=85.13 E-value=4.1 Score=32.30 Aligned_cols=79 Identities=16% Similarity=0.129 Sum_probs=51.0
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCeeEEeccccchhhHHHHHhhcC-
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFD- 116 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----~~~~v~~i~gDi~~~~~~~~l~~~~~- 116 (179)
+++||=-|++. |.-..+++++.. .+..|+.+|.++.. ...++.++++|+++.+..+++.+...
T Consensus 16 ~k~vlVTGas~-gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 83 (266)
T 3p19_A 16 KKLVVITGASS-GIGEAIARRFSE-----------EGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEK 83 (266)
T ss_dssp CCEEEEESTTS-HHHHHHHHHHHH-----------TTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCC-HHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHH
Confidence 56778778765 455555554421 14689999987521 23478899999999876555544321
Q ss_pred -CCCccEEeeCCCCCCC
Q 030299 117 -GCKADLVVCDGAPDVT 132 (179)
Q Consensus 117 -~~~~D~VlsD~~~~~~ 132 (179)
-+++|+|+++.+....
T Consensus 84 ~~g~iD~lvnnAg~~~~ 100 (266)
T 3p19_A 84 IYGPADAIVNNAGMMLL 100 (266)
T ss_dssp HHCSEEEEEECCCCCCC
T ss_pred HCCCCCEEEECCCcCCC
Confidence 1369999999875443
No 364
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=85.08 E-value=3.9 Score=33.07 Aligned_cols=75 Identities=20% Similarity=0.155 Sum_probs=52.3
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCeeEEeccccchhhHHHHHhhc
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRHF 115 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~~~v~~i~gDi~~~~~~~~l~~~~ 115 (179)
+++||=.|+ +|+....+++++.. .+..|+++|..+.. .+.++.++.+|+++.+...++.+.
T Consensus 21 ~~~vlVTGa-tG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~- 87 (333)
T 2q1w_A 21 MKKVFITGI-CGQIGSHIAELLLE-----------RGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGD- 87 (333)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHH-
T ss_pred CCEEEEeCC-ccHHHHHHHHHHHH-----------CCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhc-
Confidence 567887774 57777777665532 14689999876532 125889999999998766665542
Q ss_pred CCCCccEEeeCCCCCC
Q 030299 116 DGCKADLVVCDGAPDV 131 (179)
Q Consensus 116 ~~~~~D~VlsD~~~~~ 131 (179)
..+|+|++.++...
T Consensus 88 --~~~D~vih~A~~~~ 101 (333)
T 2q1w_A 88 --LQPDAVVHTAASYK 101 (333)
T ss_dssp --HCCSEEEECCCCCS
T ss_pred --cCCcEEEECceecC
Confidence 35899999887543
No 365
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=84.98 E-value=0.56 Score=45.33 Aligned_cols=75 Identities=12% Similarity=0.065 Sum_probs=47.9
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCeeEEeccccchhhH---HHHH
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTA---EVVI 112 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~~~v~~i~gDi~~~~~~---~~l~ 112 (179)
.-+++||.||.||++.-+.+. +. .-.|.|+|+.+.. ..++..++.+||.+.... .++.
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A-G~------------~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~~di~ 606 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA-GI------------SDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETT 606 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH-TS------------EEEEEEECSSHHHHHHHHHHCTTSEEECSCHHHHHHHHHHTCSB
T ss_pred CCeEEEeccCccHHHHHHHHC-CC------------CceEEEEECCHHHHHHHHHhCCCCccccccHHHHhhhccchhhh
Confidence 348999999999999988664 31 0257899999853 356777888888654210 0000
Q ss_pred ----hhcC-CCCccEEeeCCCC
Q 030299 113 ----RHFD-GCKADLVVCDGAP 129 (179)
Q Consensus 113 ----~~~~-~~~~D~VlsD~~~ 129 (179)
..++ .+.+|+|+.--+|
T Consensus 607 ~~~~~~lp~~~~vDll~GGpPC 628 (1002)
T 3swr_A 607 NSRGQRLPQKGDVEMLCGGPPC 628 (1002)
T ss_dssp CTTCCBCCCTTTCSEEEECCCC
T ss_pred hhhhhhcccCCCeeEEEEcCCC
Confidence 1122 2368998876543
No 366
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=84.93 E-value=2.1 Score=34.45 Aligned_cols=71 Identities=13% Similarity=-0.005 Sum_probs=47.3
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--C--CCeeEEeccccchhhHHHHHhhcCC
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVIRHFDG 117 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~--~--~~v~~i~gDi~~~~~~~~l~~~~~~ 117 (179)
.++||=.|+ +|.....+++++-. .+..|++++.++... + .+++++++|+++.+...++. .
T Consensus 13 ~M~ilVtGa-tG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~---~- 76 (342)
T 2x4g_A 13 HVKYAVLGA-TGLLGHHAARAIRA-----------AGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERAL---R- 76 (342)
T ss_dssp CCEEEEEST-TSHHHHHHHHHHHH-----------TTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHT---T-
T ss_pred CCEEEEECC-CcHHHHHHHHHHHH-----------CCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHH---c-
Confidence 357887775 57777777665532 146899999876431 1 27889999999987654443 2
Q ss_pred CCccEEeeCCCC
Q 030299 118 CKADLVVCDGAP 129 (179)
Q Consensus 118 ~~~D~VlsD~~~ 129 (179)
++|+|++..+.
T Consensus 77 -~~d~vih~a~~ 87 (342)
T 2x4g_A 77 -GLDGVIFSAGY 87 (342)
T ss_dssp -TCSEEEEC---
T ss_pred -CCCEEEECCcc
Confidence 58999998764
No 367
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=84.87 E-value=4.4 Score=32.29 Aligned_cols=79 Identities=13% Similarity=0.114 Sum_probs=51.8
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~~ 110 (179)
.+++||=.|++. |.-..+++++.. .+..|+.+|.++.. ....+.++++|+++.+..++
T Consensus 31 ~gk~~lVTGas~-GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~ 98 (276)
T 3r1i_A 31 SGKRALITGAST-GIGKKVALAYAE-----------AGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRG 98 (276)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHH-----------TTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence 467888888775 455555554431 14789999987632 12368889999999886655
Q ss_pred HHhhcCC--CCccEEeeCCCCCC
Q 030299 111 VIRHFDG--CKADLVVCDGAPDV 131 (179)
Q Consensus 111 l~~~~~~--~~~D~VlsD~~~~~ 131 (179)
+.+...+ +++|+|+++.+...
T Consensus 99 ~~~~~~~~~g~iD~lvnnAg~~~ 121 (276)
T 3r1i_A 99 MLDQMTGELGGIDIAVCNAGIVS 121 (276)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCCC
Confidence 5543211 36999999887544
No 368
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=84.87 E-value=3.8 Score=32.11 Aligned_cols=79 Identities=10% Similarity=0.029 Sum_probs=52.1
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~~ 110 (179)
.+++||=.|++.| .-..+++++.. .+.+|+.+|.++.. ...++.++++|+++.+..++
T Consensus 6 ~~k~vlVTGas~G-IG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 73 (252)
T 3h7a_A 6 RNATVAVIGAGDY-IGAEIAKKFAA-----------EGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTA 73 (252)
T ss_dssp CSCEEEEECCSSH-HHHHHHHHHHH-----------TTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHH
Confidence 4667887787755 45554444421 14689999987632 12368889999999886665
Q ss_pred HHhhcCC-CCccEEeeCCCCCC
Q 030299 111 VIRHFDG-CKADLVVCDGAPDV 131 (179)
Q Consensus 111 l~~~~~~-~~~D~VlsD~~~~~ 131 (179)
+.+...+ +++|+++++.+...
T Consensus 74 ~~~~~~~~g~id~lv~nAg~~~ 95 (252)
T 3h7a_A 74 FLNAADAHAPLEVTIFNVGANV 95 (252)
T ss_dssp HHHHHHHHSCEEEEEECCCCCC
T ss_pred HHHHHHhhCCceEEEECCCcCC
Confidence 5543211 47999999987544
No 369
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=84.82 E-value=1.4 Score=29.72 Aligned_cols=70 Identities=17% Similarity=0.089 Sum_probs=47.3
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCeeEEeccccchhhHHHHHhhcCC
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFDG 117 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----~~~~v~~i~gDi~~~~~~~~l~~~~~~ 117 (179)
+++|+=+|+ |+....+++.+... +...|+++|.++.. ...++..+.+|+++.+...++.
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~----------g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~----- 67 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTS----------SNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKAL----- 67 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHC----------SSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHT-----
T ss_pred cCeEEEECC--CHHHHHHHHHHHhC----------CCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHH-----
Confidence 467888888 77777666655321 12579999988732 1357888899999876544432
Q ss_pred CCccEEeeCCC
Q 030299 118 CKADLVVCDGA 128 (179)
Q Consensus 118 ~~~D~VlsD~~ 128 (179)
..+|+|++..+
T Consensus 68 ~~~d~vi~~~~ 78 (118)
T 3ic5_A 68 GGFDAVISAAP 78 (118)
T ss_dssp TTCSEEEECSC
T ss_pred cCCCEEEECCC
Confidence 26899998653
No 370
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=84.74 E-value=1.7 Score=34.47 Aligned_cols=79 Identities=10% Similarity=-0.002 Sum_probs=53.7
Q ss_pred CCCEEEEEccC-CChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAA-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgag-pGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---------~~~~v~~i~gDi~~~~~~~~ 110 (179)
.+++||=.|++ +||.-..+++++.. .+..|+.+|.++.. ...++.++++|+++.+..++
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~ 73 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFN-----------QGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKS 73 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHT-----------TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHH
Confidence 35688888986 47777777776642 25789999887631 12347889999999876555
Q ss_pred HHhhcC--CCCccEEeeCCCCC
Q 030299 111 VIRHFD--GCKADLVVCDGAPD 130 (179)
Q Consensus 111 l~~~~~--~~~~D~VlsD~~~~ 130 (179)
+.+... -+++|+|+++.+..
T Consensus 74 ~~~~~~~~~g~id~lv~nAg~~ 95 (275)
T 2pd4_A 74 LYNSVKKDLGSLDFIVHSVAFA 95 (275)
T ss_dssp HHHHHHHHTSCEEEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCccC
Confidence 554321 13699999988643
No 371
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=84.59 E-value=1.1 Score=35.07 Aligned_cols=81 Identities=7% Similarity=-0.074 Sum_probs=54.1
Q ss_pred CCCCEEEEEccC-CChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCeeEEeccccchhhHH
Q 030299 40 EGVKRVVDLCAA-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 40 ~~g~~VlDLgag-pGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---------~~~~v~~i~gDi~~~~~~~ 109 (179)
.++++||=.|++ .||.-..+++++.. .+..|+.++.+... ...++.++++|+++.+..+
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 80 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKR-----------EGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQID 80 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHH-----------TTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHH-----------cCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHH
Confidence 457889999985 45566666555432 14689999877421 1345889999999987655
Q ss_pred HHHhhcC--CCCccEEeeCCCCCC
Q 030299 110 VVIRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 110 ~l~~~~~--~~~~D~VlsD~~~~~ 131 (179)
++.+... -+++|+|+++.+...
T Consensus 81 ~~~~~~~~~~g~id~lv~nAg~~~ 104 (271)
T 3ek2_A 81 ALFASLKTHWDSLDGLVHSIGFAP 104 (271)
T ss_dssp HHHHHHHHHCSCEEEEEECCCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCccCc
Confidence 5554321 137999999887543
No 372
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=84.58 E-value=5.7 Score=31.43 Aligned_cols=78 Identities=10% Similarity=0.014 Sum_probs=50.8
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--C---------------CCCeeEEecccc
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--P---------------IEGVIQVQGDIT 103 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~--~---------------~~~v~~i~gDi~ 103 (179)
.++++|=.|++. |.-..+++++.. .+.+|+.+|.++.. . ...+.++++|++
T Consensus 5 ~~k~~lVTGas~-GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 72 (274)
T 3e03_A 5 SGKTLFITGASR-GIGLAIALRAAR-----------DGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIR 72 (274)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHH-----------TTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTT
T ss_pred CCcEEEEECCCC-hHHHHHHHHHHH-----------CCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 466788888775 455555544421 14689999887632 0 135778899999
Q ss_pred chhhHHHHHhhcCC--CCccEEeeCCCCC
Q 030299 104 NARTAEVVIRHFDG--CKADLVVCDGAPD 130 (179)
Q Consensus 104 ~~~~~~~l~~~~~~--~~~D~VlsD~~~~ 130 (179)
+.+..+++.+...+ +++|+++++.+..
T Consensus 73 ~~~~v~~~~~~~~~~~g~iD~lvnnAG~~ 101 (274)
T 3e03_A 73 EEDQVRAAVAATVDTFGGIDILVNNASAI 101 (274)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcc
Confidence 98765555543211 3699999998654
No 373
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=84.55 E-value=1.6 Score=34.45 Aligned_cols=78 Identities=13% Similarity=0.017 Sum_probs=51.9
Q ss_pred CCCEEEEEccCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgagp-Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---------~~~~v~~i~gDi~~~~~~~~ 110 (179)
.+++||=.|++. ||.-..+++++.. .+..|+.+|.++-. ...++.++++|+++.+..++
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~ 76 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHR-----------EGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDT 76 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHH-----------TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHH-----------CCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHH
Confidence 356788888873 6777766665532 14689999887610 11345688999999876655
Q ss_pred HHhhcCC--CCccEEeeCCCC
Q 030299 111 VIRHFDG--CKADLVVCDGAP 129 (179)
Q Consensus 111 l~~~~~~--~~~D~VlsD~~~ 129 (179)
+.+...+ +++|+|+++.+.
T Consensus 77 ~~~~~~~~~g~iD~lv~~Ag~ 97 (265)
T 1qsg_A 77 MFAELGKVWPKFDGFVHSIGF 97 (265)
T ss_dssp HHHHHHTTCSSEEEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 5543221 369999998864
No 374
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=84.50 E-value=6.8 Score=32.59 Aligned_cols=77 Identities=13% Similarity=0.022 Sum_probs=50.4
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-----------------CCCeeEEeccccc
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----------------IEGVIQVQGDITN 104 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~-----------------~~~v~~i~gDi~~ 104 (179)
|++||=.|++.| .-..+++++.. .+..|+.++.++... -..+.++++|+++
T Consensus 45 gk~vlVTGas~G-IG~aia~~La~-----------~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d 112 (346)
T 3kvo_A 45 GCTVFITGASRG-IGKAIALKAAK-----------DGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRD 112 (346)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHT-----------TTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTC
T ss_pred CCEEEEeCCChH-HHHHHHHHHHH-----------CCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCC
Confidence 677888887755 44444554432 257899998876420 1357788999999
Q ss_pred hhhHHHHHhhcCC--CCccEEeeCCCCC
Q 030299 105 ARTAEVVIRHFDG--CKADLVVCDGAPD 130 (179)
Q Consensus 105 ~~~~~~l~~~~~~--~~~D~VlsD~~~~ 130 (179)
.+..+++.+...+ +++|+|+++.+..
T Consensus 113 ~~~v~~~~~~~~~~~g~iDilVnnAG~~ 140 (346)
T 3kvo_A 113 EQQISAAVEKAIKKFGGIDILVNNASAI 140 (346)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 8765555543211 3699999988643
No 375
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=84.34 E-value=1.9 Score=35.74 Aligned_cols=78 Identities=17% Similarity=0.083 Sum_probs=50.2
Q ss_pred CCCCCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------------------------
Q 030299 37 NIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------------------- 90 (179)
Q Consensus 37 ~ll~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-------------------------- 90 (179)
+....+.+||=.| |+|..-..+++++-. .+..|+++|...-.
T Consensus 6 ~~~~~~~~vlVTG-~tGfIG~~l~~~L~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 73 (404)
T 1i24_A 6 HHHHHGSRVMVIG-GDGYCGWATALHLSK-----------KNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA 73 (404)
T ss_dssp ------CEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHH
T ss_pred ccccCCCeEEEeC-CCcHHHHHHHHHHHh-----------CCCeEEEEEecCccccccccccccccccchhhhhhhhHhh
Confidence 3445688898666 558887777766532 14689999864210
Q ss_pred -CCCCeeEEeccccchhhHHHHHhhcCCCCccEEeeCCCC
Q 030299 91 -PIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 91 -~~~~v~~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
...++.++.+|+++.+...++.+.. .+|+|++.++.
T Consensus 74 ~~~~~v~~~~~Dl~d~~~~~~~~~~~---~~D~Vih~A~~ 110 (404)
T 1i24_A 74 LTGKSIELYVGDICDFEFLAESFKSF---EPDSVVHFGEQ 110 (404)
T ss_dssp HHCCCCEEEESCTTSHHHHHHHHHHH---CCSEEEECCSC
T ss_pred ccCCceEEEECCCCCHHHHHHHHhcc---CCCEEEECCCC
Confidence 0247889999999987666655432 58999998874
No 376
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=84.14 E-value=3.3 Score=31.63 Aligned_cols=71 Identities=18% Similarity=0.114 Sum_probs=47.5
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCC--eEEEEeCCCCCC----CCCeeEEeccccchhhHHHHHhhc
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLP--LIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIRHF 115 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~--~VvavD~~~~~~----~~~v~~i~gDi~~~~~~~~l~~~~ 115 (179)
+++||=.|++ |+.-..+++++.. .+. .|++++.++... .+++.++++|+++.+..+++.
T Consensus 18 ~~~vlVtGas-g~iG~~l~~~L~~-----------~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--- 82 (242)
T 2bka_A 18 NKSVFILGAS-GETGRVLLKEILE-----------QGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAF--- 82 (242)
T ss_dssp CCEEEEECTT-SHHHHHHHHHHHH-----------HTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGG---
T ss_pred CCeEEEECCC-cHHHHHHHHHHHc-----------CCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHh---
Confidence 5678887764 6666655554421 134 899999876431 247889999999987544332
Q ss_pred CCCCccEEeeCCCC
Q 030299 116 DGCKADLVVCDGAP 129 (179)
Q Consensus 116 ~~~~~D~VlsD~~~ 129 (179)
. .+|+|++..+.
T Consensus 83 ~--~~d~vi~~ag~ 94 (242)
T 2bka_A 83 Q--GHDVGFCCLGT 94 (242)
T ss_dssp S--SCSEEEECCCC
T ss_pred c--CCCEEEECCCc
Confidence 2 68999998764
No 377
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=83.99 E-value=1.1 Score=35.79 Aligned_cols=79 Identities=13% Similarity=0.050 Sum_probs=52.7
Q ss_pred CCCEEEEEccCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CCCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------APIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgagp-Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~~~~~v~~i~gDi~~~~~~~~ 110 (179)
.+++||=.|++. ||.-..+++++.. .+.+|+.+|.++. ....++.++++|+++.+..++
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~ 88 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHR-----------EGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKN 88 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHH-----------TTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHH-----------cCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHH
Confidence 467888889873 6676666665532 1468999987752 012357789999999876555
Q ss_pred HHhhcC--CCCccEEeeCCCCC
Q 030299 111 VIRHFD--GCKADLVVCDGAPD 130 (179)
Q Consensus 111 l~~~~~--~~~~D~VlsD~~~~ 130 (179)
+.+... -+++|+|+++.+..
T Consensus 89 ~~~~~~~~~g~iD~lv~~Ag~~ 110 (285)
T 2p91_A 89 LKKFLEENWGSLDIIVHSIAYA 110 (285)
T ss_dssp HHHHHHHHTSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 544321 13699999998643
No 378
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=83.88 E-value=3 Score=34.86 Aligned_cols=72 Identities=18% Similarity=0.105 Sum_probs=43.5
Q ss_pred CCCCCEEEEEccCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCeeEEecccc--chhhHHHH
Q 030299 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDIT--NARTAEVV 111 (179)
Q Consensus 39 l~~g~~VlDLgagp-Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~----~~~v~~i~gDi~--~~~~~~~l 111 (179)
+++|++||=+|||+ |..+..+++..+ ..+|+++|.++.+. --|+..+ .|.. +.+..+.+
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~i 256 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAG-------------ASRIIGIDIDSKKYETAKKFGVNEF-VNPKDHDKPIQEVI 256 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHT-------------CSCEEEECSCTTHHHHHHTTTCCEE-ECGGGCSSCHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCeEEEEcCCHHHHHHHHHcCCcEE-EccccCchhHHHHH
Confidence 47899999999865 555666677665 24899999888521 1243221 2222 22334445
Q ss_pred HhhcCCCCccEEee
Q 030299 112 IRHFDGCKADLVVC 125 (179)
Q Consensus 112 ~~~~~~~~~D~Vls 125 (179)
.+...+ ++|+|+-
T Consensus 257 ~~~~~g-g~D~vid 269 (378)
T 3uko_A 257 VDLTDG-GVDYSFE 269 (378)
T ss_dssp HHHTTS-CBSEEEE
T ss_pred HHhcCC-CCCEEEE
Confidence 544444 7888874
No 379
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=83.87 E-value=7 Score=30.73 Aligned_cols=81 Identities=17% Similarity=0.045 Sum_probs=51.2
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------------------CCCCeeEE
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------------PIEGVIQV 98 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------------------~~~~v~~i 98 (179)
.+++||=-|++.| .-..+++++.. .+..|+.+|.++-. .-..+.++
T Consensus 9 ~gk~vlVTGas~g-IG~~ia~~l~~-----------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (287)
T 3pxx_A 9 QDKVVLVTGGARG-QGRSHAVKLAE-----------EGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTA 76 (287)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHH-----------TTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEE
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHH-----------CCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEE
Confidence 3667888887755 44444444432 15789999986210 12367889
Q ss_pred eccccchhhHHHHHhhcC--CCCccEEeeCCCCCCCC
Q 030299 99 QGDITNARTAEVVIRHFD--GCKADLVVCDGAPDVTG 133 (179)
Q Consensus 99 ~gDi~~~~~~~~l~~~~~--~~~~D~VlsD~~~~~~g 133 (179)
++|+++.+..+++.+... -+++|+|+++.+....+
T Consensus 77 ~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~ 113 (287)
T 3pxx_A 77 EVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLG 113 (287)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred EccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCccc
Confidence 999999876555544321 13699999998754433
No 380
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=83.87 E-value=9.3 Score=29.94 Aligned_cols=76 Identities=12% Similarity=0.138 Sum_probs=49.6
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCeeEEeccccchhhHHHHHhhcC--CCC
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD--GCK 119 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v~~i~gDi~~~~~~~~l~~~~~--~~~ 119 (179)
+++||=.|++. |.-..+++++.. ....|+.++.++.. ...+.++++|+++.+..+++.+... -++
T Consensus 21 ~k~vlVTGas~-gIG~aia~~l~~-----------~G~~V~~~~r~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 87 (253)
T 2nm0_A 21 SRSVLVTGGNR-GIGLAIARAFAD-----------AGDKVAITYRSGEP-PEGFLAVKCDITDTEQVEQAYKEIEETHGP 87 (253)
T ss_dssp CCEEEEETTTS-HHHHHHHHHHHH-----------TTCEEEEEESSSCC-CTTSEEEECCTTSHHHHHHHHHHHHHHTCS
T ss_pred CCEEEEeCCCC-HHHHHHHHHHHH-----------CCCEEEEEeCChHh-hccceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 56788888764 555555554421 14689999887643 3458889999999876555443321 136
Q ss_pred ccEEeeCCCCC
Q 030299 120 ADLVVCDGAPD 130 (179)
Q Consensus 120 ~D~VlsD~~~~ 130 (179)
+|+|+++.+..
T Consensus 88 iD~lv~nAg~~ 98 (253)
T 2nm0_A 88 VEVLIANAGVT 98 (253)
T ss_dssp CSEEEEECSCC
T ss_pred CCEEEECCCCC
Confidence 89999987643
No 381
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=83.70 E-value=9.2 Score=29.60 Aligned_cols=78 Identities=5% Similarity=-0.012 Sum_probs=52.8
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCC---CeEEEEeCCCCCC---------CCCeeEEeccccchhhH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL---PLIVAIDLQPMAP---------IEGVIQVQGDITNARTA 108 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~---~~VvavD~~~~~~---------~~~v~~i~gDi~~~~~~ 108 (179)
++++||=.|++ |+.-..+++++.. .. ..|+.++.++... ..++.++.+|+++.+..
T Consensus 20 ~~k~vlITGas-ggIG~~la~~L~~-----------~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v 87 (267)
T 1sny_A 20 HMNSILITGCN-RGLGLGLVKALLN-----------LPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAY 87 (267)
T ss_dssp CCSEEEESCCS-SHHHHHHHHHHHT-----------SSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGH
T ss_pred CCCEEEEECCC-CcHHHHHHHHHHh-----------cCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHH
Confidence 35678877765 6666666666542 13 6899999876421 23788999999998766
Q ss_pred HHHHhhc----CCCCccEEeeCCCCC
Q 030299 109 EVVIRHF----DGCKADLVVCDGAPD 130 (179)
Q Consensus 109 ~~l~~~~----~~~~~D~VlsD~~~~ 130 (179)
+++.+.+ ....+|+|++..+..
T Consensus 88 ~~~~~~~~~~~g~~~id~li~~Ag~~ 113 (267)
T 1sny_A 88 DKLVADIEGVTKDQGLNVLFNNAGIA 113 (267)
T ss_dssp HHHHHHHHHHHGGGCCSEEEECCCCC
T ss_pred HHHHHHHHHhcCCCCccEEEECCCcC
Confidence 6555432 212699999988643
No 382
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=83.68 E-value=1.2 Score=36.61 Aligned_cols=75 Identities=8% Similarity=0.011 Sum_probs=46.4
Q ss_pred CCCCCEEEEEccCCChH-HHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCeeEEeccccchhhHHHHHh
Q 030299 39 FEGVKRVVDLCAAPGSW-SQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 39 l~~g~~VlDLgagpGg~-s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~----~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
+++|++||=+|||++|- ...++...+ ..+|+++|.++.+. -.|... .-|..+.+..+++.+
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~-------------g~~Vi~~~~~~~r~~~~~~~Ga~~-~i~~~~~~~~~~v~~ 226 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVF-------------GAKVIAVDINQDKLNLAKKIGADV-TINSGDVNPVDEIKK 226 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTS-------------CCEEEEEESCHHHHHHHHHTTCSE-EEEC-CCCHHHHHHH
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhC-------------CCEEEEEECcHHHhhhhhhcCCeE-EEeCCCCCHHHHhhh
Confidence 47899999999998654 334444443 47999999987421 113221 123344445566666
Q ss_pred hcCCCCccEEeeCC
Q 030299 114 HFDGCKADLVVCDG 127 (179)
Q Consensus 114 ~~~~~~~D~VlsD~ 127 (179)
...+..+|.++-+.
T Consensus 227 ~t~g~g~d~~~~~~ 240 (348)
T 4eez_A 227 ITGGLGVQSAIVCA 240 (348)
T ss_dssp HTTSSCEEEEEECC
T ss_pred hcCCCCceEEEEec
Confidence 66666788887654
No 383
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=83.48 E-value=9.1 Score=30.66 Aligned_cols=72 Identities=17% Similarity=0.137 Sum_probs=47.6
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhHHH
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~~~ 110 (179)
+++||=.| |+|..-.++++++-. .+..|++++.++.. ...+++++++|+++.+...+
T Consensus 9 ~~~vlVTG-atGfIG~~l~~~Ll~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 76 (338)
T 2rh8_A 9 KKTACVVG-GTGFVASLLVKLLLQ-----------KGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEA 76 (338)
T ss_dssp CCEEEEEC-TTSHHHHHHHHHHHH-----------TTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHH
T ss_pred CCEEEEEC-CchHHHHHHHHHHHH-----------CCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHH
Confidence 56787666 677777777766532 14678887655421 01368899999999776554
Q ss_pred HHhhcCCCCccEEeeCCCCC
Q 030299 111 VIRHFDGCKADLVVCDGAPD 130 (179)
Q Consensus 111 l~~~~~~~~~D~VlsD~~~~ 130 (179)
+.+ .+|+|++..++.
T Consensus 77 ~~~-----~~D~Vih~A~~~ 91 (338)
T 2rh8_A 77 PIA-----GCDFVFHVATPV 91 (338)
T ss_dssp HHT-----TCSEEEEESSCC
T ss_pred HHc-----CCCEEEEeCCcc
Confidence 432 589999987653
No 384
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=83.31 E-value=3.4 Score=32.32 Aligned_cols=79 Identities=18% Similarity=0.140 Sum_probs=49.5
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-------CCCeeEEeccccchhhHHHHHh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-------IEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~-------~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
.++++|=-|++.| .-..+++++.. .+..|+.+|.++... ...+.++++|+++.+..+++.+
T Consensus 6 ~~k~~lVTGas~g-IG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 73 (257)
T 3tpc_A 6 KSRVFIVTGASSG-LGAAVTRMLAQ-----------EGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALA 73 (257)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHH-----------TTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHH-----------CCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHH
Confidence 4567787787654 55555554432 147899999876421 1357889999999876555544
Q ss_pred hcC--CCCccEEeeCCCCCC
Q 030299 114 HFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 114 ~~~--~~~~D~VlsD~~~~~ 131 (179)
... -+++|+++++.+...
T Consensus 74 ~~~~~~g~id~lv~nAg~~~ 93 (257)
T 3tpc_A 74 FAKQEFGHVHGLVNCAGTAP 93 (257)
T ss_dssp HHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHcCCCCEEEECCCCCC
Confidence 321 136999999887543
No 385
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=83.24 E-value=9 Score=30.21 Aligned_cols=79 Identities=13% Similarity=0.024 Sum_probs=50.7
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------------------CCCCeeEE
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------------PIEGVIQV 98 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------------------~~~~v~~i 98 (179)
.++++|=-|++.| .-..+++++.. .+.+|+.+|.++.. ....+.++
T Consensus 9 ~~k~~lVTGas~g-IG~a~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (281)
T 3s55_A 9 EGKTALITGGARG-MGRSHAVALAE-----------AGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISA 76 (281)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHH-----------TTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHH-----------CCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEE
Confidence 3667888887754 55555554431 15789999986311 12467889
Q ss_pred eccccchhhHHHHHhhcC--CCCccEEeeCCCCCC
Q 030299 99 QGDITNARTAEVVIRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 99 ~gDi~~~~~~~~l~~~~~--~~~~D~VlsD~~~~~ 131 (179)
++|+++.+..+++.+... -+++|+++++.+...
T Consensus 77 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 111 (281)
T 3s55_A 77 KVDVKDRAALESFVAEAEDTLGGIDIAITNAGIST 111 (281)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCC
T ss_pred eCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 999999876555554321 136999999887543
No 386
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=83.24 E-value=2.7 Score=32.94 Aligned_cols=80 Identities=9% Similarity=-0.073 Sum_probs=52.4
Q ss_pred CCCEEEEEccCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC------------CCCeeEEeccccchhh
Q 030299 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------------IEGVIQVQGDITNART 107 (179)
Q Consensus 41 ~g~~VlDLgagp-Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~------------~~~v~~i~gDi~~~~~ 107 (179)
.+++||=.|++. ||.-..+++++.. .+..|+.++.++... ...+.++++|+++.+.
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~-----------~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~ 87 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAE-----------MGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYES 87 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHH-----------TSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHH-----------CCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHH
Confidence 467888888873 5566655555432 146888888775321 2467888999999876
Q ss_pred HHHHHhhcC--CCCccEEeeCCCCCC
Q 030299 108 AEVVIRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 108 ~~~l~~~~~--~~~~D~VlsD~~~~~ 131 (179)
.+++.+... -+++|+|+++.+...
T Consensus 88 v~~~~~~~~~~~g~id~li~nAg~~~ 113 (267)
T 3gdg_A 88 CEKLVKDVVADFGQIDAFIANAGATA 113 (267)
T ss_dssp HHHHHHHHHHHTSCCSEEEECCCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 555554321 136899999886543
No 387
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=83.23 E-value=1.6 Score=32.73 Aligned_cols=74 Identities=19% Similarity=0.144 Sum_probs=43.6
Q ss_pred CCCCCEEEEEccCC--ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCeeEEeccccchhhHHHHH
Q 030299 39 FEGVKRVVDLCAAP--GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVI 112 (179)
Q Consensus 39 l~~g~~VlDLgagp--Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----~~~~v~~i~gDi~~~~~~~~l~ 112 (179)
+++|++||..|++. |.....++...+ .+|+++|.++.. .-.|... ..|..+.+..+.+.
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G--------------~~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~ 100 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIG--------------ARIYTTAGSDAKREMLSRLGVEY-VGDSRSVDFADEIL 100 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHT--------------CEEEEEESSHHHHHHHHTTCCSE-EEETTCSTHHHHHH
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcC--------------CEEEEEeCCHHHHHHHHHcCCCE-EeeCCcHHHHHHHH
Confidence 47899999999643 333333344443 689999987631 0123322 23555555555555
Q ss_pred hhcCCCCccEEeeCC
Q 030299 113 RHFDGCKADLVVCDG 127 (179)
Q Consensus 113 ~~~~~~~~D~VlsD~ 127 (179)
+...+.++|+|+...
T Consensus 101 ~~~~~~~~D~vi~~~ 115 (198)
T 1pqw_A 101 ELTDGYGVDVVLNSL 115 (198)
T ss_dssp HHTTTCCEEEEEECC
T ss_pred HHhCCCCCeEEEECC
Confidence 544445799998754
No 388
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=83.22 E-value=7.9 Score=31.55 Aligned_cols=72 Identities=25% Similarity=0.230 Sum_probs=50.1
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----CCCCeeEEecccc-chhhHHHHHhhc
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----PIEGVIQVQGDIT-NARTAEVVIRHF 115 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----~~~~v~~i~gDi~-~~~~~~~l~~~~ 115 (179)
+++||=.| |+|.....+++++-. .++..|++++.++.. ..++++++++|++ +.+...++.+
T Consensus 24 ~~~vlVtG-atG~iG~~l~~~L~~----------~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-- 90 (372)
T 3slg_A 24 AKKVLILG-VNGFIGHHLSKRILE----------TTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK-- 90 (372)
T ss_dssp CCEEEEES-CSSHHHHHHHHHHHH----------HSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH--
T ss_pred CCEEEEEC-CCChHHHHHHHHHHh----------CCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc--
Confidence 45788666 567777777665521 013689999988743 1368999999999 8776655543
Q ss_pred CCCCccEEeeCCCC
Q 030299 116 DGCKADLVVCDGAP 129 (179)
Q Consensus 116 ~~~~~D~VlsD~~~ 129 (179)
++|+|++-++.
T Consensus 91 ---~~d~Vih~A~~ 101 (372)
T 3slg_A 91 ---KCDVILPLVAI 101 (372)
T ss_dssp ---HCSEEEECBCC
T ss_pred ---cCCEEEEcCcc
Confidence 58999997764
No 389
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=82.73 E-value=5.3 Score=30.67 Aligned_cols=77 Identities=10% Similarity=0.038 Sum_probs=50.0
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCC-CCCC----------CCCeeEEeccccchhhHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQ-PMAP----------IEGVIQVQGDITNARTAE 109 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~-~~~~----------~~~v~~i~gDi~~~~~~~ 109 (179)
.+++||=.|++ |+.-..+++++.. .+..|+++|.+ +... ..++.++++|+++.+..+
T Consensus 6 ~~k~vlVTGas-ggiG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 73 (258)
T 3afn_B 6 KGKRVLITGSS-QGIGLATARLFAR-----------AGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQ 73 (258)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHH-----------TTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHH-----------CCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 35677866765 6666666665532 14689999987 4210 236888999999987655
Q ss_pred HHHhhcC--CCCccEEeeCCCC
Q 030299 110 VVIRHFD--GCKADLVVCDGAP 129 (179)
Q Consensus 110 ~l~~~~~--~~~~D~VlsD~~~ 129 (179)
++.+... -+++|+|++..+.
T Consensus 74 ~~~~~~~~~~g~id~vi~~Ag~ 95 (258)
T 3afn_B 74 QLVDEFVAKFGGIDVLINNAGG 95 (258)
T ss_dssp HHHHHHHHHHSSCSEEEECCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 5544221 1269999998864
No 390
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=82.70 E-value=4 Score=32.77 Aligned_cols=76 Identities=12% Similarity=0.014 Sum_probs=51.2
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCeeEEeccccchhhHHHHHhhcC--CC
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD--GC 118 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~~~~v~~i~gDi~~~~~~~~l~~~~~--~~ 118 (179)
+|+++|=-|++.|.- ..+++++.. .+.+|+.+|.+..+......++++|+++.+..+++.+... -+
T Consensus 10 ~GK~alVTGas~GIG-~aia~~la~-----------~Ga~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 77 (261)
T 4h15_A 10 RGKRALITAGTKGAG-AATVSLFLE-----------LGAQVLTTARARPEGLPEELFVEADLTTKEGCAIVAEATRQRLG 77 (261)
T ss_dssp TTCEEEESCCSSHHH-HHHHHHHHH-----------TTCEEEEEESSCCTTSCTTTEEECCTTSHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeccCcHHH-HHHHHHHHH-----------cCCEEEEEECCchhCCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 577888878776644 444444321 2578999998876655566688999999876555444321 13
Q ss_pred CccEEeeCCC
Q 030299 119 KADLVVCDGA 128 (179)
Q Consensus 119 ~~D~VlsD~~ 128 (179)
.+|+++++..
T Consensus 78 ~iDilVnnAG 87 (261)
T 4h15_A 78 GVDVIVHMLG 87 (261)
T ss_dssp SCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6999999865
No 391
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=82.56 E-value=4.3 Score=33.52 Aligned_cols=72 Identities=15% Similarity=-0.003 Sum_probs=49.7
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCC-CeEEEEeCCCCCC------CCCeeEEeccccchhhHHHHHh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL-PLIVAIDLQPMAP------IEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~-~~VvavD~~~~~~------~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
.+++||=.|+ +|.....+++++-. .+ ..|++++..+... .++++++++|+++.+..+++
T Consensus 31 ~~~~ilVtGa-tG~iG~~l~~~L~~-----------~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~-- 96 (377)
T 2q1s_A 31 ANTNVMVVGG-AGFVGSNLVKRLLE-----------LGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASL-- 96 (377)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-----------TTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHC--
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHH-----------cCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHH--
Confidence 3567887775 57777777666532 13 6899999876431 35799999999997654433
Q ss_pred hcCCCCccEEeeCCCC
Q 030299 114 HFDGCKADLVVCDGAP 129 (179)
Q Consensus 114 ~~~~~~~D~VlsD~~~ 129 (179)
+ ..+|+|++.++.
T Consensus 97 -~--~~~d~Vih~A~~ 109 (377)
T 2q1s_A 97 -Q--DEYDYVFHLATY 109 (377)
T ss_dssp -C--SCCSEEEECCCC
T ss_pred -h--hCCCEEEECCCc
Confidence 2 268999998764
No 392
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=82.53 E-value=3.8 Score=33.10 Aligned_cols=79 Identities=13% Similarity=-0.047 Sum_probs=52.1
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~~ 110 (179)
.+.+||=.|++. |.-..+++++.. .+..|+.+|.++.. ...++.++++|+++.+..++
T Consensus 30 ~gk~vlVTGas~-gIG~~la~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~ 97 (301)
T 3tjr_A 30 DGRAAVVTGGAS-GIGLATATEFAR-----------RGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVR 97 (301)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 467888888875 455555554421 14689999987631 12468889999999876655
Q ss_pred HHhhcC--CCCccEEeeCCCCCC
Q 030299 111 VIRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 111 l~~~~~--~~~~D~VlsD~~~~~ 131 (179)
+.+... -+++|+|+++.+...
T Consensus 98 ~~~~~~~~~g~id~lvnnAg~~~ 120 (301)
T 3tjr_A 98 LADEAFRLLGGVDVVFSNAGIVV 120 (301)
T ss_dssp HHHHHHHHHSSCSEEEECCCCCC
T ss_pred HHHHHHHhCCCCCEEEECCCcCC
Confidence 554321 136999999987543
No 393
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=82.50 E-value=5.4 Score=31.35 Aligned_cols=78 Identities=10% Similarity=-0.005 Sum_probs=50.1
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------------CCCCeeEEeccccchhhH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------------~~~~v~~i~gDi~~~~~~ 108 (179)
.++++|=-|++.| .-..+++++.. .+..|+.+|.++.. +...+.++++|+++.+..
T Consensus 7 ~~k~~lVTGas~G-IG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v 74 (265)
T 3lf2_A 7 SEAVAVVTGGSSG-IGLATVELLLE-----------AGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQV 74 (265)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHH
Confidence 4667888887755 44444444421 14689999987631 122488899999998765
Q ss_pred HHHHhhcC--CCCccEEeeCCCCC
Q 030299 109 EVVIRHFD--GCKADLVVCDGAPD 130 (179)
Q Consensus 109 ~~l~~~~~--~~~~D~VlsD~~~~ 130 (179)
+++.+... -+++|+++++.+..
T Consensus 75 ~~~~~~~~~~~g~id~lvnnAg~~ 98 (265)
T 3lf2_A 75 RAFAEACERTLGCASILVNNAGQG 98 (265)
T ss_dssp HHHHHHHHHHHCSCSEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 55544321 13689999988753
No 394
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=82.21 E-value=1.2 Score=36.91 Aligned_cols=73 Identities=19% Similarity=0.206 Sum_probs=43.6
Q ss_pred CCCCCEEEEEccCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCeeEEecccc---chhhHHH
Q 030299 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDIT---NARTAEV 110 (179)
Q Consensus 39 l~~g~~VlDLgagp-Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----~~~~v~~i~gDi~---~~~~~~~ 110 (179)
+++|++||-+|||+ |..+..+++..+ ..+|+++|.++.+ .--|+..+ .|.. +.+..++
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~~ 234 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMG-------------AAQVVVTDLSATRLSKAKEIGADLV-LQISKESPQEIARK 234 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEEESCHHHHHHHHHTTCSEE-EECSSCCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEECCCHHHHHHHHHhCCCEE-EcCcccccchHHHH
Confidence 47899999999876 555666666654 2389999988732 01233211 1222 1333444
Q ss_pred HHhhcCCCCccEEeeC
Q 030299 111 VIRHFDGCKADLVVCD 126 (179)
Q Consensus 111 l~~~~~~~~~D~VlsD 126 (179)
+.+... +++|+|+-.
T Consensus 235 i~~~~~-~g~D~vid~ 249 (356)
T 1pl8_A 235 VEGQLG-CKPEVTIEC 249 (356)
T ss_dssp HHHHHT-SCCSEEEEC
T ss_pred HHHHhC-CCCCEEEEC
Confidence 544444 579998854
No 395
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=82.15 E-value=4.2 Score=31.52 Aligned_cols=78 Identities=13% Similarity=0.028 Sum_probs=51.8
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-------CCCeeEEeccccchhhHHHHHh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-------IEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~-------~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
.+++||=.|++ |+.-..+++++.. ....|+.+|.++... ..++.++++|+++.+..+++.+
T Consensus 11 ~~k~vlVTGas-ggiG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 78 (265)
T 2o23_A 11 KGLVAVITGGA-SGLGLATAERLVG-----------QGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALA 78 (265)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHH-----------CCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHH
Confidence 45678888876 5666666655532 146899999876421 1368889999999876555544
Q ss_pred hcC--CCCccEEeeCCCCC
Q 030299 114 HFD--GCKADLVVCDGAPD 130 (179)
Q Consensus 114 ~~~--~~~~D~VlsD~~~~ 130 (179)
... -+++|+|++..+..
T Consensus 79 ~~~~~~g~id~li~~Ag~~ 97 (265)
T 2o23_A 79 LAKGKFGRVDVAVNCAGIA 97 (265)
T ss_dssp HHHHHHSCCCEEEECCCCC
T ss_pred HHHHHCCCCCEEEECCccC
Confidence 221 13699999988654
No 396
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=81.85 E-value=6.3 Score=30.81 Aligned_cols=77 Identities=14% Similarity=0.151 Sum_probs=49.5
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHHHH
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEVV 111 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~~l 111 (179)
+++||=.|++ ||.-..+++++.. .+.+|+.+|.++.. ....+.++++|+++.+..+++
T Consensus 6 ~k~vlVTGas-~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 73 (257)
T 3imf_A 6 EKVVIITGGS-SGMGKGMATRFAK-----------EGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKM 73 (257)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence 5677777766 4555555554421 14789999987621 123688899999998765555
Q ss_pred HhhcC--CCCccEEeeCCCCC
Q 030299 112 IRHFD--GCKADLVVCDGAPD 130 (179)
Q Consensus 112 ~~~~~--~~~~D~VlsD~~~~ 130 (179)
.+... -+++|+++++.+..
T Consensus 74 ~~~~~~~~g~id~lv~nAg~~ 94 (257)
T 3imf_A 74 IEQIDEKFGRIDILINNAAGN 94 (257)
T ss_dssp HHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCCCC
Confidence 54321 13689999988643
No 397
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=81.85 E-value=2.5 Score=35.01 Aligned_cols=69 Identities=12% Similarity=0.065 Sum_probs=48.5
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CCCCCeeEEeccccchhhHHHHH
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------APIEGVIQVQGDITNARTAEVVI 112 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~~~~~v~~i~gDi~~~~~~~~l~ 112 (179)
+..+||+=+|+|.....+..+ ..+++.||..+. +...++.++++|....- ..+.
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~---------------~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L--~~l~ 154 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS---------------QDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKL--NALL 154 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT---------------TSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHH--HHHC
T ss_pred CCCceeEeCCcHHHHHHHcCC---------------CCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHH--HHhc
Confidence 456899999999998887663 368999999983 12246788888876531 1111
Q ss_pred hhcCCCCccEEeeCCCC
Q 030299 113 RHFDGCKADLVVCDGAP 129 (179)
Q Consensus 113 ~~~~~~~~D~VlsD~~~ 129 (179)
. +..++|+|+.|.+.
T Consensus 155 ~--~~~~fdLVfiDPPY 169 (283)
T 2oo3_A 155 P--PPEKRGLIFIDPSY 169 (283)
T ss_dssp S--CTTSCEEEEECCCC
T ss_pred C--CCCCccEEEECCCC
Confidence 1 23469999999764
No 398
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=81.83 E-value=6.3 Score=29.31 Aligned_cols=68 Identities=13% Similarity=0.009 Sum_probs=46.4
Q ss_pred EEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC---CCCeeEEeccccchhhHHHHHhhcCCCCc
Q 030299 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---IEGVIQVQGDITNARTAEVVIRHFDGCKA 120 (179)
Q Consensus 44 ~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~---~~~v~~i~gDi~~~~~~~~l~~~~~~~~~ 120 (179)
+||=.|+ +|+.-..+++++-. .+..|++++.++... .++++++++|+++.+. + .+ ..+
T Consensus 2 kvlVtGa-tG~iG~~l~~~L~~-----------~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~-~----~~--~~~ 62 (221)
T 3ew7_A 2 KIGIIGA-TGRAGSRILEEAKN-----------RGHEVTAIVRNAGKITQTHKDINILQKDIFDLTL-S----DL--SDQ 62 (221)
T ss_dssp EEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCH-H----HH--TTC
T ss_pred eEEEEcC-CchhHHHHHHHHHh-----------CCCEEEEEEcCchhhhhccCCCeEEeccccChhh-h----hh--cCC
Confidence 4555554 56666666665532 146899999887321 1689999999999875 2 23 358
Q ss_pred cEEeeCCCCC
Q 030299 121 DLVVCDGAPD 130 (179)
Q Consensus 121 D~VlsD~~~~ 130 (179)
|+|++..++.
T Consensus 63 d~vi~~ag~~ 72 (221)
T 3ew7_A 63 NVVVDAYGIS 72 (221)
T ss_dssp SEEEECCCSS
T ss_pred CEEEECCcCC
Confidence 9999988763
No 399
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=81.80 E-value=7.3 Score=29.94 Aligned_cols=78 Identities=9% Similarity=-0.011 Sum_probs=51.2
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHHHH
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEVV 111 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~~l 111 (179)
+++||=.|++ ||.-..+++++.. .+.+|+.++.++.. ....+.++++|+++.+..+++
T Consensus 5 ~k~vlITGas-~gIG~~~a~~l~~-----------~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 72 (247)
T 3lyl_A 5 EKVALVTGAS-RGIGFEVAHALAS-----------KGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNF 72 (247)
T ss_dssp TCEEEESSCS-SHHHHHHHHHHHH-----------TTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCC-ChHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence 5677777765 5555555554432 14789999987631 124688899999998866665
Q ss_pred HhhcC--CCCccEEeeCCCCCC
Q 030299 112 IRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 112 ~~~~~--~~~~D~VlsD~~~~~ 131 (179)
.+... .+++|+|++..+...
T Consensus 73 ~~~~~~~~~~id~li~~Ag~~~ 94 (247)
T 3lyl_A 73 FAEIKAENLAIDILVNNAGITR 94 (247)
T ss_dssp HHHHHHTTCCCSEEEECCCCCC
T ss_pred HHHHHHHcCCCCEEEECCCCCC
Confidence 54331 246999999987543
No 400
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=81.78 E-value=2.7 Score=34.77 Aligned_cols=75 Identities=15% Similarity=0.146 Sum_probs=45.0
Q ss_pred CCCCCEEEEEccCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----CC-CCeeEEeccc-cchhhHHH
Q 030299 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----PI-EGVIQVQGDI-TNARTAEV 110 (179)
Q Consensus 39 l~~g~~VlDLgagp-Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----~~-~~v~~i~gDi-~~~~~~~~ 110 (179)
+++|++||=+|||+ |..+..+++..+ ...|+++|.++.+ .+ ..+.....|- .+.+..++
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~ 243 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAG-------------ACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKK 243 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTT-------------CCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHH
Confidence 48899999999866 555566666654 2349999988732 11 1222222221 12334455
Q ss_pred HHhhcCCCCccEEeeC
Q 030299 111 VIRHFDGCKADLVVCD 126 (179)
Q Consensus 111 l~~~~~~~~~D~VlsD 126 (179)
+.+...+.++|+|+-.
T Consensus 244 v~~~t~g~g~Dvvid~ 259 (363)
T 3m6i_A 244 IVESFGGIEPAVALEC 259 (363)
T ss_dssp HHHHTSSCCCSEEEEC
T ss_pred HHHHhCCCCCCEEEEC
Confidence 6655556789999853
No 401
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=81.71 E-value=1.1 Score=37.16 Aligned_cols=74 Identities=14% Similarity=0.103 Sum_probs=43.1
Q ss_pred CCCCCEEEEEccCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCeeEEeccccc-hhhHHHHH
Q 030299 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITN-ARTAEVVI 112 (179)
Q Consensus 39 l~~g~~VlDLgagp-Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----~~~~v~~i~gDi~~-~~~~~~l~ 112 (179)
+++|++||-+|||+ |..+..+++..+ .+|+++|.++.+ .--|+..+ .|..+ .+..+++.
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~G--------------a~Vi~~~~~~~~~~~~~~lGa~~~-~~~~~~~~~~~~i~ 230 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYG--------------AFVVCTARSPRRLEVAKNCGADVT-LVVDPAKEEESSII 230 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESCHHHHHHHHHTTCSEE-EECCTTTSCHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--------------CEEEEEcCCHHHHHHHHHhCCCEE-EcCcccccHHHHHH
Confidence 47899999999865 455555666654 579999988632 01233211 23332 33334444
Q ss_pred hhcC---CCCccEEeeCC
Q 030299 113 RHFD---GCKADLVVCDG 127 (179)
Q Consensus 113 ~~~~---~~~~D~VlsD~ 127 (179)
+... +.++|+|+-..
T Consensus 231 ~~~~~~~g~g~D~vid~~ 248 (352)
T 1e3j_A 231 ERIRSAIGDLPNVTIDCS 248 (352)
T ss_dssp HHHHHHSSSCCSEEEECS
T ss_pred HHhccccCCCCCEEEECC
Confidence 4333 35799988643
No 402
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=81.71 E-value=1.1 Score=37.42 Aligned_cols=73 Identities=11% Similarity=-0.047 Sum_probs=44.3
Q ss_pred CCCCCEEEEEccCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCeeEEeccccchhhHHHHHh
Q 030299 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 39 l~~g~~VlDLgagp-Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~----~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
+++|++||=+|+|+ |..+..+++..+ .+|+++|.++.+. --|+..+ .|-.+.+..+++.+
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~G--------------a~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~v~~ 251 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATG--------------AEVIVTSSSREKLDRAFALGADHG-INRLEEDWVERVYA 251 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTT--------------CEEEEEESCHHHHHHHHHHTCSEE-EETTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--------------CEEEEEecCchhHHHHHHcCCCEE-EcCCcccHHHHHHH
Confidence 47899999999776 555556666654 6899999886320 0133222 12111233445555
Q ss_pred hcCCCCccEEeeC
Q 030299 114 HFDGCKADLVVCD 126 (179)
Q Consensus 114 ~~~~~~~D~VlsD 126 (179)
...+.++|+|+-.
T Consensus 252 ~~~g~g~D~vid~ 264 (363)
T 3uog_A 252 LTGDRGADHILEI 264 (363)
T ss_dssp HHTTCCEEEEEEE
T ss_pred HhCCCCceEEEEC
Confidence 5556689998854
No 403
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=81.70 E-value=11 Score=30.67 Aligned_cols=80 Identities=13% Similarity=0.064 Sum_probs=52.1
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CC--CCeeEEeccccchhhH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI--EGVIQVQGDITNARTA 108 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~--~~v~~i~gDi~~~~~~ 108 (179)
.+.+||=-|++.| ....+++++.. .+..|+.++.++.. .. ..+.++++|+++.+..
T Consensus 7 ~~k~vlVTGas~g-IG~~la~~l~~-----------~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v 74 (319)
T 3ioy_A 7 AGRTAFVTGGANG-VGIGLVRQLLN-----------QGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGF 74 (319)
T ss_dssp TTCEEEEETTTST-HHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHH
T ss_pred CCCEEEEcCCchH-HHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHH
Confidence 3567888888755 45555554421 14789999988631 01 2688899999998765
Q ss_pred HHHHhhcC--CCCccEEeeCCCCCCC
Q 030299 109 EVVIRHFD--GCKADLVVCDGAPDVT 132 (179)
Q Consensus 109 ~~l~~~~~--~~~~D~VlsD~~~~~~ 132 (179)
+++.+... -+.+|+|+++.+....
T Consensus 75 ~~~~~~~~~~~g~id~lv~nAg~~~~ 100 (319)
T 3ioy_A 75 KMAADEVEARFGPVSILCNNAGVNLF 100 (319)
T ss_dssp HHHHHHHHHHTCCEEEEEECCCCCCC
T ss_pred HHHHHHHHHhCCCCCEEEECCCcCCC
Confidence 55554321 1368999999875443
No 404
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=81.68 E-value=5.4 Score=31.73 Aligned_cols=80 Identities=9% Similarity=-0.022 Sum_probs=50.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~ 109 (179)
..+++||=-|++.| .-..+++++.. .+..|+.+|.++.. ....+.++++|+++.+..+
T Consensus 22 ~~~k~~lVTGas~G-IG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~ 89 (279)
T 3sju_A 22 SRPQTAFVTGVSSG-IGLAVARTLAA-----------RGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVH 89 (279)
T ss_dssp ---CEEEEESTTSH-HHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCCH-HHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence 35678888887655 44444444421 14789999987631 1246888999999987655
Q ss_pred HHHhhcC--CCCccEEeeCCCCCC
Q 030299 110 VVIRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 110 ~l~~~~~--~~~~D~VlsD~~~~~ 131 (179)
++.+... -+++|+|+++.+...
T Consensus 90 ~~~~~~~~~~g~id~lv~nAg~~~ 113 (279)
T 3sju_A 90 AAVAAAVERFGPIGILVNSAGRNG 113 (279)
T ss_dssp HHHHHHHHHHCSCCEEEECCCCCC
T ss_pred HHHHHHHHHcCCCcEEEECCCCCC
Confidence 5444321 136899999887543
No 405
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=81.60 E-value=7.3 Score=31.96 Aligned_cols=72 Identities=18% Similarity=-0.001 Sum_probs=48.9
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------CC--------C-CeeEEeccccchh
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------PI--------E-GVIQVQGDITNAR 106 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-------~~--------~-~v~~i~gDi~~~~ 106 (179)
++||=.|| +|+....+++++-. .+..|++++.++.. .+ + ++.++.+|+++.+
T Consensus 29 k~vlVtGa-tG~IG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 96 (381)
T 1n7h_A 29 KIALITGI-TGQDGSYLTEFLLG-----------KGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDAS 96 (381)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHH
T ss_pred CeEEEEcC-CchHHHHHHHHHHH-----------CCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHH
Confidence 47887775 57777766665532 14689999876532 11 2 7889999999987
Q ss_pred hHHHHHhhcCCCCccEEeeCCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
...++.+.. .+|+|++.++.
T Consensus 97 ~~~~~~~~~---~~d~Vih~A~~ 116 (381)
T 1n7h_A 97 SLRRWIDVI---KPDEVYNLAAQ 116 (381)
T ss_dssp HHHHHHHHH---CCSEEEECCSC
T ss_pred HHHHHHHhc---CCCEEEECCcc
Confidence 666555432 58999998764
No 406
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=81.58 E-value=6.1 Score=31.65 Aligned_cols=71 Identities=14% Similarity=0.066 Sum_probs=48.0
Q ss_pred EEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHHHHHh
Q 030299 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 44 ~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
+||=.| |+|+.-..+++++.. .+..|+++|..... ...++.++++|+++.+..+++.+
T Consensus 3 ~vlVTG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~ 70 (347)
T 1orr_A 3 KLLITG-GCGFLGSNLASFALS-----------QGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLIT 70 (347)
T ss_dssp EEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHH
T ss_pred EEEEeC-CCchhHHHHHHHHHh-----------CCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHh
Confidence 466556 467777777666532 14689999864311 12358899999999877666654
Q ss_pred hcCCCCccEEeeCCCC
Q 030299 114 HFDGCKADLVVCDGAP 129 (179)
Q Consensus 114 ~~~~~~~D~VlsD~~~ 129 (179)
. ..+|+|++.++.
T Consensus 71 ~---~~~d~vih~A~~ 83 (347)
T 1orr_A 71 K---YMPDSCFHLAGQ 83 (347)
T ss_dssp H---HCCSEEEECCCC
T ss_pred c---cCCCEEEECCcc
Confidence 3 258999998864
No 407
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=81.48 E-value=7.1 Score=30.13 Aligned_cols=78 Identities=12% Similarity=0.048 Sum_probs=50.9
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-----------CCCeeEEeccccchhhHHH
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----------IEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~-----------~~~v~~i~gDi~~~~~~~~ 110 (179)
+++||=.|++ |+.-..+++++.. .+..|+.++.++... ..++.++++|+++.+..++
T Consensus 14 ~k~vlITGas-ggiG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~ 81 (265)
T 1h5q_A 14 NKTIIVTGGN-RGIGLAFTRAVAA-----------AGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTK 81 (265)
T ss_dssp TEEEEEETTT-SHHHHHHHHHHHH-----------TTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred CCEEEEECCC-chHHHHHHHHHHH-----------CCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHH
Confidence 5577877865 6666666665532 146899999755321 2368889999999876555
Q ss_pred HHhhcC--CCCccEEeeCCCCCC
Q 030299 111 VIRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 111 l~~~~~--~~~~D~VlsD~~~~~ 131 (179)
+.+... -+.+|+|++..+...
T Consensus 82 ~~~~~~~~~~~id~li~~Ag~~~ 104 (265)
T 1h5q_A 82 TIQQIDADLGPISGLIANAGVSV 104 (265)
T ss_dssp HHHHHHHHSCSEEEEEECCCCCC
T ss_pred HHHHHHHhcCCCCEEEECCCcCC
Confidence 544321 136999999886543
No 408
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=81.47 E-value=4.4 Score=31.29 Aligned_cols=78 Identities=15% Similarity=0.098 Sum_probs=51.1
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~~ 110 (179)
.+++||=.|++ |+.-..+++++.. .+.+|+.+|.++.. ...++.++++|+++.+..++
T Consensus 12 ~~k~vlItGas-ggiG~~la~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~ 79 (260)
T 3awd_A 12 DNRVAIVTGGA-QNIGLACVTALAE-----------AGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQN 79 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence 45678877765 5666666655532 14689999987521 12368889999999876555
Q ss_pred HHhhcC--CCCccEEeeCCCCC
Q 030299 111 VIRHFD--GCKADLVVCDGAPD 130 (179)
Q Consensus 111 l~~~~~--~~~~D~VlsD~~~~ 130 (179)
+.+... -+++|+|++..+..
T Consensus 80 ~~~~~~~~~~~id~vi~~Ag~~ 101 (260)
T 3awd_A 80 AVRSVHEQEGRVDILVACAGIC 101 (260)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 544221 13689999988643
No 409
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=81.40 E-value=6.8 Score=30.40 Aligned_cols=79 Identities=16% Similarity=0.133 Sum_probs=50.4
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------CCCCeeEEeccccchhhHHHHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEGVIQVQGDITNARTAEVVI 112 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~--------~~~~v~~i~gDi~~~~~~~~l~ 112 (179)
.+++||=.|++ ||.-..+++++.. .+..|+.+|.++.. ...++.++++|+++.+..+++.
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 73 (249)
T 2ew8_A 6 KDKLAVITGGA-NGIGRAIAERFAV-----------EGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFG 73 (249)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH-----------CCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHH
Confidence 35678877866 4555555554431 14689999987621 1235788999999987655554
Q ss_pred hhcC--CCCccEEeeCCCCCC
Q 030299 113 RHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 113 ~~~~--~~~~D~VlsD~~~~~ 131 (179)
+... -+++|+|+++.+...
T Consensus 74 ~~~~~~~g~id~lv~nAg~~~ 94 (249)
T 2ew8_A 74 KQVISTFGRCDILVNNAGIYP 94 (249)
T ss_dssp HHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHcCCCCEEEECCCCCC
Confidence 3221 136999999887543
No 410
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=81.30 E-value=6.5 Score=32.16 Aligned_cols=72 Identities=15% Similarity=0.031 Sum_probs=48.1
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------------CCCCeeEEeccccchh
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------PIEGVIQVQGDITNAR 106 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------------~~~~v~~i~gDi~~~~ 106 (179)
++||=.|+ +|+.-..+++++-. .+..|++++..+.. ...++.++++|+++.+
T Consensus 25 ~~vlVtGa-tG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~ 92 (375)
T 1t2a_A 25 NVALITGI-TGQDGSYLAEFLLE-----------KGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDST 92 (375)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHH
T ss_pred cEEEEECC-CchHHHHHHHHHHH-----------CCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHH
Confidence 46777775 56676666665531 14689999877532 1246889999999987
Q ss_pred hHHHHHhhcCCCCccEEeeCCCC
Q 030299 107 TAEVVIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 107 ~~~~l~~~~~~~~~D~VlsD~~~ 129 (179)
...++.+.. .+|+|++.++.
T Consensus 93 ~~~~~~~~~---~~d~vih~A~~ 112 (375)
T 1t2a_A 93 CLVKIINEV---KPTEIYNLGAQ 112 (375)
T ss_dssp HHHHHHHHH---CCSEEEECCSC
T ss_pred HHHHHHHhc---CCCEEEECCCc
Confidence 666655432 58999998764
No 411
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=81.26 E-value=1.2 Score=36.72 Aligned_cols=73 Identities=15% Similarity=0.081 Sum_probs=44.3
Q ss_pred CCCCCCEEEEEccCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCeeEEeccccchhhHHHHH
Q 030299 38 IFEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVI 112 (179)
Q Consensus 38 ll~~g~~VlDLgagp-Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~----~~~v~~i~gDi~~~~~~~~l~ 112 (179)
.+++|++||=+|||+ |..+..+++..+ ..+|+++|.++.+. --|+..+. |..+ +..+++.
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-------------~~~Vi~~~~~~~~~~~~~~lGa~~~i-~~~~-~~~~~v~ 232 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-------------AARVIAVDLDDDRLALAREVGADAAV-KSGA-GAADAIR 232 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-------------CCEEEEEESCHHHHHHHHHTTCSEEE-ECST-THHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEEcCCHHHHHHHHHcCCCEEE-cCCC-cHHHHHH
Confidence 357899999999876 566666777664 37999999987420 11332211 1111 3334455
Q ss_pred hhcCCCCccEEee
Q 030299 113 RHFDGCKADLVVC 125 (179)
Q Consensus 113 ~~~~~~~~D~Vls 125 (179)
+...+.++|+|+-
T Consensus 233 ~~t~g~g~d~v~d 245 (345)
T 3jv7_A 233 ELTGGQGATAVFD 245 (345)
T ss_dssp HHHGGGCEEEEEE
T ss_pred HHhCCCCCeEEEE
Confidence 4444557888875
No 412
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=81.24 E-value=5.5 Score=31.33 Aligned_cols=79 Identities=11% Similarity=0.000 Sum_probs=50.8
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~~ 109 (179)
.+++||=-|++ ||.-..+++++.. .+.+|+.+|.++.. ....+.++++|+++.+..+
T Consensus 9 ~~k~vlVTGas-~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~ 76 (262)
T 3pk0_A 9 QGRSVVVTGGT-KGIGRGIATVFAR-----------AGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCD 76 (262)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHH
Confidence 46677777766 4555555554432 14689999987631 1146889999999987655
Q ss_pred HHHhhcC--CCCccEEeeCCCCCC
Q 030299 110 VVIRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 110 ~l~~~~~--~~~~D~VlsD~~~~~ 131 (179)
++.+... -+++|+++++.+...
T Consensus 77 ~~~~~~~~~~g~id~lvnnAg~~~ 100 (262)
T 3pk0_A 77 ALAGRAVEEFGGIDVVCANAGVFP 100 (262)
T ss_dssp HHHHHHHHHHSCCSEEEECCCCCC
T ss_pred HHHHHHHHHhCCCCEEEECCCCCC
Confidence 5544321 136999999886543
No 413
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=81.09 E-value=7.7 Score=31.78 Aligned_cols=78 Identities=12% Similarity=0.138 Sum_probs=49.6
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCC--CCC--------------CCCeeEEeccccch
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP--MAP--------------IEGVIQVQGDITNA 105 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~--~~~--------------~~~v~~i~gDi~~~ 105 (179)
+.+||=.||+ ||.-..+++++.. ....|+.++.+. ... ..++.++++|+++.
T Consensus 2 ~k~vlVTGas-~GIG~ala~~L~~-----------~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~ 69 (327)
T 1jtv_A 2 RTVVLITGCS-SGIGLHLAVRLAS-----------DPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDS 69 (327)
T ss_dssp CEEEEESCCS-SHHHHHHHHHHHT-----------CTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH-----------CCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCH
Confidence 3456666766 5566666666542 133455544332 110 14688899999999
Q ss_pred hhHHHHHhhcCCCCccEEeeCCCCCC
Q 030299 106 RTAEVVIRHFDGCKADLVVCDGAPDV 131 (179)
Q Consensus 106 ~~~~~l~~~~~~~~~D~VlsD~~~~~ 131 (179)
+..+++.+....+.+|+|+++.....
T Consensus 70 ~~v~~~~~~~~~g~iD~lVnnAG~~~ 95 (327)
T 1jtv_A 70 KSVAAARERVTEGRVDVLVCNAGLGL 95 (327)
T ss_dssp HHHHHHHHTCTTSCCSEEEECCCCCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCcCC
Confidence 88777777655567999999986543
No 414
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=81.05 E-value=1.9 Score=33.48 Aligned_cols=77 Identities=18% Similarity=0.113 Sum_probs=50.5
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~~ 110 (179)
.+++||=.|++ ||.-..+++++.. .+..|+.+|.++.. ....+.++++|+++.+..++
T Consensus 8 ~~k~vlITGas-~giG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 75 (253)
T 3qiv_A 8 ENKVGIVTGSG-GGIGQAYAEALAR-----------EGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKA 75 (253)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHH-----------CCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Confidence 46678877865 5555555555432 14789999987631 12467889999999876555
Q ss_pred HHhhcC--CCCccEEeeCCCC
Q 030299 111 VIRHFD--GCKADLVVCDGAP 129 (179)
Q Consensus 111 l~~~~~--~~~~D~VlsD~~~ 129 (179)
+.+... -+++|+|+++.+.
T Consensus 76 ~~~~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 76 MADRTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCc
Confidence 554321 1369999998764
No 415
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=81.01 E-value=5.3 Score=31.49 Aligned_cols=79 Identities=10% Similarity=-0.046 Sum_probs=51.6
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~~ 110 (179)
.+.+||=.|++ |+.-..+++++.. .+..|+++|.++.. ...++.++++|+++.+..++
T Consensus 30 ~~k~vlITGas-ggIG~~la~~L~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~ 97 (272)
T 1yb1_A 30 TGEIVLITGAG-HGIGRLTAYEFAK-----------LKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYS 97 (272)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHH-----------CCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHH
Confidence 35678877765 5566666555432 14689999987621 02368889999999876555
Q ss_pred HHhhcC--CCCccEEeeCCCCCC
Q 030299 111 VIRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 111 l~~~~~--~~~~D~VlsD~~~~~ 131 (179)
+.+... -+.+|+|++..+...
T Consensus 98 ~~~~~~~~~g~iD~li~~Ag~~~ 120 (272)
T 1yb1_A 98 SAKKVKAEIGDVSILVNNAGVVY 120 (272)
T ss_dssp HHHHHHHHTCCCSEEEECCCCCC
T ss_pred HHHHHHHHCCCCcEEEECCCcCC
Confidence 544321 136999999887543
No 416
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=80.97 E-value=5.2 Score=31.84 Aligned_cols=77 Identities=14% Similarity=0.090 Sum_probs=50.6
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------------CCCCeeEEeccccchh
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------PIEGVIQVQGDITNAR 106 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---------------~~~~v~~i~gDi~~~~ 106 (179)
+.+||=.|++ |+.-..+++++.. .+..|+.+|.++.. ...++.++++|+++.+
T Consensus 18 ~k~vlVTGas-ggIG~~la~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~ 85 (303)
T 1yxm_A 18 GQVAIVTGGA-TGIGKAIVKELLE-----------LGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEE 85 (303)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHH
Confidence 5688888865 6666666655432 14689999877521 1246889999999987
Q ss_pred hHHHHHhhcC--CCCccEEeeCCCCC
Q 030299 107 TAEVVIRHFD--GCKADLVVCDGAPD 130 (179)
Q Consensus 107 ~~~~l~~~~~--~~~~D~VlsD~~~~ 130 (179)
..+++.+... -+++|+|++..+..
T Consensus 86 ~v~~~~~~~~~~~g~id~li~~Ag~~ 111 (303)
T 1yxm_A 86 EVNNLVKSTLDTFGKINFLVNNGGGQ 111 (303)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 6555544321 13699999988743
No 417
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=80.97 E-value=10 Score=31.08 Aligned_cols=75 Identities=20% Similarity=0.026 Sum_probs=49.7
Q ss_pred CCEEEEEccCCChHHHHHHHHhC-CCCCCCCCCCCCCCCeEEEEeCCCCCC------------------------CCC--
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLY-LPAKLSPDSREGDLPLIVAIDLQPMAP------------------------IEG-- 94 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~-~~~~~~~~~~~~~~~~VvavD~~~~~~------------------------~~~-- 94 (179)
+++||=.|+ +|+.-..+++++- . .+..|+++|..+... ..+
T Consensus 2 ~m~vlVTGa-tG~iG~~l~~~L~~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (397)
T 1gy8_A 2 HMRVLVCGG-AGYIGSHFVRALLRD-----------TNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADR 69 (397)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHHH-----------CCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTC
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHh-----------CCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCc
Confidence 356776664 5767666665542 2 146899998764321 125
Q ss_pred -eeEEeccccchhhHHHHHhhcCCCCccEEeeCCCCC
Q 030299 95 -VIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPD 130 (179)
Q Consensus 95 -v~~i~gDi~~~~~~~~l~~~~~~~~~D~VlsD~~~~ 130 (179)
+.++.+|+++.+...++.+.+ +.+|+|++.+++.
T Consensus 70 ~~~~~~~Dl~d~~~~~~~~~~~--~~~d~vih~A~~~ 104 (397)
T 1gy8_A 70 YAALEVGDVRNEDFLNGVFTRH--GPIDAVVHMCAFL 104 (397)
T ss_dssp CCEEEESCTTCHHHHHHHHHHS--CCCCEEEECCCCC
T ss_pred eEEEEECCCCCHHHHHHHHHhc--CCCCEEEECCCcc
Confidence 889999999988766665532 2499999988753
No 418
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=80.96 E-value=6.8 Score=30.01 Aligned_cols=77 Identities=13% Similarity=0.154 Sum_probs=49.3
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------C--CCCeeEEeccccchhhHHH
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P--IEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---------~--~~~v~~i~gDi~~~~~~~~ 110 (179)
+++||=.|++ |+.-..+++++.. .+..|+.+|.++.. . ..++.++++|+++.+..++
T Consensus 2 ~k~vlItGas-ggiG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 69 (250)
T 2cfc_A 2 SRVAIVTGAS-SGNGLAIATRFLA-----------RGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNA 69 (250)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHH
T ss_pred CCEEEEeCCC-chHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence 4567777765 6666666655532 14689999977521 1 1357889999999876555
Q ss_pred HHhhcC--CCCccEEeeCCCCC
Q 030299 111 VIRHFD--GCKADLVVCDGAPD 130 (179)
Q Consensus 111 l~~~~~--~~~~D~VlsD~~~~ 130 (179)
+.+... -+++|+|++..+..
T Consensus 70 ~~~~~~~~~~~id~li~~Ag~~ 91 (250)
T 2cfc_A 70 AIAATMEQFGAIDVLVNNAGIT 91 (250)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHhCCCCEEEECCCCC
Confidence 544221 13689999988654
No 419
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=80.93 E-value=8.2 Score=30.67 Aligned_cols=79 Identities=10% Similarity=0.144 Sum_probs=52.0
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~~ 110 (179)
.|++||=-|++ ||.-..+++++.. .+..|+.+|.++.. ....+.++++|+++.+..++
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~ 99 (275)
T 4imr_A 32 RGRTALVTGSS-RGIGAAIAEGLAG-----------AGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTD 99 (275)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHH-----------TTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-----------CCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHH
Confidence 46678877766 4555555554431 14789999987742 12468889999999876555
Q ss_pred HHhhcC-CCCccEEeeCCCCCC
Q 030299 111 VIRHFD-GCKADLVVCDGAPDV 131 (179)
Q Consensus 111 l~~~~~-~~~~D~VlsD~~~~~ 131 (179)
+.+... .+++|+++++.+...
T Consensus 100 ~~~~~~~~g~iD~lvnnAg~~~ 121 (275)
T 4imr_A 100 LIERAEAIAPVDILVINASAQI 121 (275)
T ss_dssp HHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHhCCCCEEEECCCCCC
Confidence 554321 147999999887533
No 420
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=80.93 E-value=8.2 Score=30.29 Aligned_cols=79 Identities=10% Similarity=0.036 Sum_probs=50.9
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~~ 109 (179)
.+++||=.|++ ||.-..+++++.. .+..|+.++..... .-.++.++++|+++.+..+
T Consensus 24 ~~k~vlITGas-~gIG~~~a~~l~~-----------~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~ 91 (269)
T 3gk3_A 24 AKRVAFVTGGM-GGLGAAISRRLHD-----------AGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCE 91 (269)
T ss_dssp CCCEEEETTTT-SHHHHHHHHHHHT-----------TTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHH
T ss_pred cCCEEEEECCC-chHHHHHHHHHHH-----------CCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHH
Confidence 45677766765 5666666665542 25688888855421 1246889999999987655
Q ss_pred HHHhhcCC--CCccEEeeCCCCCC
Q 030299 110 VVIRHFDG--CKADLVVCDGAPDV 131 (179)
Q Consensus 110 ~l~~~~~~--~~~D~VlsD~~~~~ 131 (179)
++.+...+ +++|+|+++.+...
T Consensus 92 ~~~~~~~~~~g~id~li~nAg~~~ 115 (269)
T 3gk3_A 92 RCAEKVLADFGKVDVLINNAGITR 115 (269)
T ss_dssp HHHHHHHHHHSCCSEEEECCCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCcCC
Confidence 55543211 36899999887543
No 421
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=80.88 E-value=3.7 Score=31.42 Aligned_cols=78 Identities=17% Similarity=0.032 Sum_probs=49.1
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhHHH
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~~~ 110 (179)
+++||=.|++ ||.-..+++++.. .+..|+.++.++.. ....+.++++|+++.+..++
T Consensus 2 ~k~vlITGas-~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 69 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEAIARALAR-----------DGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEE 69 (235)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHH
Confidence 4567777765 5555555555432 14689998887521 12468889999999876555
Q ss_pred HHhhcC--CCCccEEeeCCCCCC
Q 030299 111 VIRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 111 l~~~~~--~~~~D~VlsD~~~~~ 131 (179)
+.+... -+++|+++++.+...
T Consensus 70 ~~~~~~~~~g~id~li~~Ag~~~ 92 (235)
T 3l77_A 70 FSKKVLERFGDVDVVVANAGLGY 92 (235)
T ss_dssp HCC-HHHHHSSCSEEEECCCCCC
T ss_pred HHHHHHHhcCCCCEEEECCcccc
Confidence 443221 136999999887543
No 422
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=80.88 E-value=2.2 Score=33.78 Aligned_cols=78 Identities=15% Similarity=0.080 Sum_probs=50.8
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccch-hhH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNA-RTA 108 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~-~~~ 108 (179)
.+.+||=-|++ ||.-..+++++.. .+..|+.++.++.. ...++.++++|+++. +..
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v 78 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSS-----------NGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATM 78 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHH
Confidence 46678877776 5555555555432 15789999987621 124688999999997 655
Q ss_pred HHHHhhcCC--CCccEEeeCCCCC
Q 030299 109 EVVIRHFDG--CKADLVVCDGAPD 130 (179)
Q Consensus 109 ~~l~~~~~~--~~~D~VlsD~~~~ 130 (179)
+++.+.+.. +.+|+|+++.+..
T Consensus 79 ~~~~~~~~~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 79 SSLADFIKTHFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHHHHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHHHHhCCCCCEEEECCccc
Confidence 555543321 3799999998754
No 423
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=80.58 E-value=4.3 Score=32.46 Aligned_cols=72 Identities=18% Similarity=0.142 Sum_probs=49.0
Q ss_pred EEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---CC-CCeeEEeccccchhhHHHHHhhcCCCC
Q 030299 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---PI-EGVIQVQGDITNARTAEVVIRHFDGCK 119 (179)
Q Consensus 44 ~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---~~-~~v~~i~gDi~~~~~~~~l~~~~~~~~ 119 (179)
+||=.| |+|.....+++++.. .+..|+++|..+.. .+ .+++++++|+++.+...++.+. .+
T Consensus 3 ~ilVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~~ 67 (330)
T 2c20_A 3 SILICG-GAGYIGSHAVKKLVD-----------EGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQ---EN 67 (330)
T ss_dssp EEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHH---SC
T ss_pred EEEEEC-CCcHHHHHHHHHHHh-----------CCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhh---cC
Confidence 456555 467777777666532 14689999876532 12 2788999999998776666543 36
Q ss_pred ccEEeeCCCCC
Q 030299 120 ADLVVCDGAPD 130 (179)
Q Consensus 120 ~D~VlsD~~~~ 130 (179)
+|+|++..+..
T Consensus 68 ~d~vih~a~~~ 78 (330)
T 2c20_A 68 IEAVMHFAADS 78 (330)
T ss_dssp EEEEEECCCCC
T ss_pred CCEEEECCccc
Confidence 99999987653
No 424
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=80.54 E-value=5 Score=31.37 Aligned_cols=78 Identities=15% Similarity=0.099 Sum_probs=50.2
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--C---------CCCeeEEeccccchhhHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--P---------IEGVIQVQGDITNARTAE 109 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~--~---------~~~v~~i~gDi~~~~~~~ 109 (179)
++++||=.|++ ||.-..+++++.. .+.+|+.+|.++.. . -.++.++++|+++.+..+
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~ 73 (263)
T 3ai3_A 6 SGKVAVITGSS-SGIGLAIAEGFAK-----------EGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVD 73 (263)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHH-----------CCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 35678877766 5555555555432 14689999987521 0 235788999999987655
Q ss_pred HHHhhcC--CCCccEEeeCCCCC
Q 030299 110 VVIRHFD--GCKADLVVCDGAPD 130 (179)
Q Consensus 110 ~l~~~~~--~~~~D~VlsD~~~~ 130 (179)
++.+... -+++|+|+++.+..
T Consensus 74 ~~~~~~~~~~g~id~lv~~Ag~~ 96 (263)
T 3ai3_A 74 AVVESVRSSFGGADILVNNAGTG 96 (263)
T ss_dssp HHHHHHHHHHSSCSEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCC
Confidence 5544221 13689999988654
No 425
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=80.50 E-value=2.3 Score=35.95 Aligned_cols=73 Identities=19% Similarity=0.135 Sum_probs=44.8
Q ss_pred CCCCCEEEEEccCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCeeEEeccccchhhHHHHHh
Q 030299 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 39 l~~g~~VlDLgagp-Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~----~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
+++|++||=+|||+ |..+..+++..+ ..+|+++|.++.+. --|+..+ -|..+.+..+++.+
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~i~~ 276 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAG-------------ASKVILSEPSEVRRNLAKELGADHV-IDPTKENFVEAVLD 276 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEECSCHHHHHHHHHHTCSEE-ECTTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEECCCHHHHHHHHHcCCCEE-EcCCCCCHHHHHHH
Confidence 57899999999865 444555566554 23899999887321 0133221 23333344555666
Q ss_pred hcCCCCccEEee
Q 030299 114 HFDGCKADLVVC 125 (179)
Q Consensus 114 ~~~~~~~D~Vls 125 (179)
...+.++|+|+-
T Consensus 277 ~t~g~g~D~vid 288 (404)
T 3ip1_A 277 YTNGLGAKLFLE 288 (404)
T ss_dssp HTTTCCCSEEEE
T ss_pred HhCCCCCCEEEE
Confidence 556668999985
No 426
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=80.40 E-value=7.5 Score=31.35 Aligned_cols=79 Identities=11% Similarity=0.044 Sum_probs=50.8
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------C--CCCeeEEeccccchhhHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P--IEGVIQVQGDITNARTAE 109 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---------~--~~~v~~i~gDi~~~~~~~ 109 (179)
.+++||=-|++. |.-..+++++.. .+..|+.+|.++.. . ...+.++++|+++.+..+
T Consensus 40 ~~k~vlVTGas~-GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~ 107 (293)
T 3rih_A 40 SARSVLVTGGTK-GIGRGIATVFAR-----------AGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCA 107 (293)
T ss_dssp TTCEEEETTTTS-HHHHHHHHHHHH-----------TTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHH
Confidence 466788777664 455555554421 14689999987632 1 146888999999987655
Q ss_pred HHHhhcC--CCCccEEeeCCCCCC
Q 030299 110 VVIRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 110 ~l~~~~~--~~~~D~VlsD~~~~~ 131 (179)
++.+... -+.+|+|+++.+...
T Consensus 108 ~~~~~~~~~~g~iD~lvnnAg~~~ 131 (293)
T 3rih_A 108 DAARTVVDAFGALDVVCANAGIFP 131 (293)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCCC
Confidence 5544321 136899999886543
No 427
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=80.39 E-value=3.7 Score=33.67 Aligned_cols=73 Identities=19% Similarity=0.124 Sum_probs=46.0
Q ss_pred CCCCCEEEEEccC--CChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCeeEEeccccchhhHHHHH
Q 030299 39 FEGVKRVVDLCAA--PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVI 112 (179)
Q Consensus 39 l~~g~~VlDLgag--pGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~----~~~v~~i~gDi~~~~~~~~l~ 112 (179)
+++|++||-.||| -|..+..++...+ .+|+++|.++.+. --|...+ .|..+.+..+++.
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--------------a~Vi~~~~~~~~~~~~~~lga~~~-~~~~~~~~~~~~~ 206 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILN--------------FRLIAVTRNNKHTEELLRLGAAYV-IDTSTAPLYETVM 206 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHT--------------CEEEEEESSSTTHHHHHHHTCSEE-EETTTSCHHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcC--------------CEEEEEeCCHHHHHHHHhCCCcEE-EeCCcccHHHHHH
Confidence 4789999999987 3555556666654 6899999887531 0122211 2344444455566
Q ss_pred hhcCCCCccEEeeC
Q 030299 113 RHFDGCKADLVVCD 126 (179)
Q Consensus 113 ~~~~~~~~D~VlsD 126 (179)
+...+.++|+|+..
T Consensus 207 ~~~~~~g~Dvvid~ 220 (340)
T 3gms_A 207 ELTNGIGADAAIDS 220 (340)
T ss_dssp HHTTTSCEEEEEES
T ss_pred HHhCCCCCcEEEEC
Confidence 55555679998754
No 428
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=80.39 E-value=4.6 Score=31.82 Aligned_cols=77 Identities=12% Similarity=0.096 Sum_probs=50.3
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------CCCCeeEEeccccchhhHHHHHhh
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------PIEGVIQVQGDITNARTAEVVIRH 114 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-------~~~~v~~i~gDi~~~~~~~~l~~~ 114 (179)
+++||=.|++ |+.-..+++++.. .+..|+++|.++.. ...++.++++|+++.+..+++.+.
T Consensus 5 ~k~vlVTGas-~gIG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~ 72 (281)
T 3m1a_A 5 AKVWLVTGAS-SGFGRAIAEAAVA-----------AGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAAD 72 (281)
T ss_dssp CCEEEETTTT-SHHHHHHHHHHHH-----------TTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHH
T ss_pred CcEEEEECCC-ChHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHH
Confidence 4566666655 5666666655432 14789999987632 124788999999998765555443
Q ss_pred cC--CCCccEEeeCCCCC
Q 030299 115 FD--GCKADLVVCDGAPD 130 (179)
Q Consensus 115 ~~--~~~~D~VlsD~~~~ 130 (179)
.. .+++|+|++..+..
T Consensus 73 ~~~~~g~id~lv~~Ag~~ 90 (281)
T 3m1a_A 73 VLARYGRVDVLVNNAGRT 90 (281)
T ss_dssp HHHHHSCCSEEEECCCCE
T ss_pred HHHhCCCCCEEEECCCcC
Confidence 21 13689999988754
No 429
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=80.32 E-value=5.2 Score=30.72 Aligned_cols=79 Identities=14% Similarity=0.024 Sum_probs=51.8
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~~ 110 (179)
.+++||=.|+ .|+.-..+++++.. .+..|+++|.++.. ...++.++.+|+++.+..++
T Consensus 10 ~~~~vlVtGa-sggiG~~la~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 77 (255)
T 1fmc_A 10 DGKCAIITGA-GAGIGKEIAITFAT-----------AGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSA 77 (255)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHT-----------TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHH-----------CCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHH
Confidence 3567777675 56677766666542 25689999987521 12468888999999876555
Q ss_pred HHhhcC--CCCccEEeeCCCCCC
Q 030299 111 VIRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 111 l~~~~~--~~~~D~VlsD~~~~~ 131 (179)
+.+... -+++|+|++..+...
T Consensus 78 ~~~~~~~~~~~~d~vi~~Ag~~~ 100 (255)
T 1fmc_A 78 LADFAISKLGKVDILVNNAGGGG 100 (255)
T ss_dssp HHHHHHHHHSSCCEEEECCCCCC
T ss_pred HHHHHHHhcCCCCEEEECCCCCC
Confidence 544221 136999999876543
No 430
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=80.32 E-value=6.4 Score=31.05 Aligned_cols=79 Identities=6% Similarity=-0.048 Sum_probs=51.4
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~~ 110 (179)
.+++||=.|++ ||.-..+++++.. .+.+|+.+|.++.. ...++.++++|+++.+..++
T Consensus 20 ~~k~vlVTGas-~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 87 (273)
T 1ae1_A 20 KGTTALVTGGS-KGIGYAIVEELAG-----------LGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDK 87 (273)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCc-chHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 46788888875 5555555555431 14689999987521 12367889999999876555
Q ss_pred HHhhcC---CCCccEEeeCCCCCC
Q 030299 111 VIRHFD---GCKADLVVCDGAPDV 131 (179)
Q Consensus 111 l~~~~~---~~~~D~VlsD~~~~~ 131 (179)
+.+... ++.+|+|+++.+...
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~ 111 (273)
T 1ae1_A 88 LMQTVAHVFDGKLNILVNNAGVVI 111 (273)
T ss_dssp HHHHHHHHTTSCCCEEEECCCCCC
T ss_pred HHHHHHHHcCCCCcEEEECCCCCC
Confidence 543221 147999999987543
No 431
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=80.24 E-value=1.7 Score=34.24 Aligned_cols=79 Identities=13% Similarity=0.050 Sum_probs=51.6
Q ss_pred CCCEEEEEccC-CChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAA-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgag-pGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---------~~~~v~~i~gDi~~~~~~~~ 110 (179)
.+++||=.|++ .||.-..+++++.. .+.+|+.+|.++.. ...++.++++|+++.+..++
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~ 75 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKE-----------AGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDA 75 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHH-----------HTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHH-----------CCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHH
Confidence 35688888987 36666666655431 14689999877520 12347888999999876555
Q ss_pred HHhhcC--CCCccEEeeCCCCC
Q 030299 111 VIRHFD--GCKADLVVCDGAPD 130 (179)
Q Consensus 111 l~~~~~--~~~~D~VlsD~~~~ 130 (179)
+.+... -+++|+|++..+..
T Consensus 76 ~~~~~~~~~g~iD~lv~~Ag~~ 97 (261)
T 2wyu_A 76 LFAGVKEAFGGLDYLVHAIAFA 97 (261)
T ss_dssp HHHHHHHHHSSEEEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 544221 13699999988643
No 432
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=80.15 E-value=4.3 Score=32.40 Aligned_cols=79 Identities=14% Similarity=0.146 Sum_probs=51.1
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------CCCCeeEEeccccchhhHHHHHh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------PIEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-------~~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
.+++||=-|++.| .-..+++++.. .+..|+.+|.++.. ....+.++++|+++.+..+++.+
T Consensus 26 ~~k~vlVTGas~G-IG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 93 (277)
T 4dqx_A 26 NQRVCIVTGGGSG-IGRATAELFAK-----------NGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVE 93 (277)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHH-----------TTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHH
Confidence 4667888887654 55555554421 14789999987631 12467889999999876555544
Q ss_pred hcC--CCCccEEeeCCCCCC
Q 030299 114 HFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 114 ~~~--~~~~D~VlsD~~~~~ 131 (179)
... -+++|+|+++.+...
T Consensus 94 ~~~~~~g~iD~lv~nAg~~~ 113 (277)
T 4dqx_A 94 KTTAKWGRVDVLVNNAGFGT 113 (277)
T ss_dssp HHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHcCCCCEEEECCCcCC
Confidence 321 136899999987543
No 433
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=80.11 E-value=4.4 Score=31.70 Aligned_cols=78 Identities=14% Similarity=0.054 Sum_probs=50.3
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------C-CCCeeEEeccccchhhHHHHHh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P-IEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~-~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
.+++||=.|++ ||.-..+++++.. .+.+|+.+|.++.. . ...+.++++|+++.+..+++.+
T Consensus 7 ~~k~vlVTGas-~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 74 (259)
T 4e6p_A 7 EGKSALITGSA-RGIGRAFAEAYVR-----------EGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIA 74 (259)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHH
Confidence 35678877866 5555555554432 14689999987531 1 2467889999999876554443
Q ss_pred hcC--CCCccEEeeCCCCC
Q 030299 114 HFD--GCKADLVVCDGAPD 130 (179)
Q Consensus 114 ~~~--~~~~D~VlsD~~~~ 130 (179)
... -+++|+|+++.+..
T Consensus 75 ~~~~~~g~id~lv~~Ag~~ 93 (259)
T 4e6p_A 75 ATVEHAGGLDILVNNAALF 93 (259)
T ss_dssp HHHHHSSSCCEEEECCCCC
T ss_pred HHHHHcCCCCEEEECCCcC
Confidence 221 13699999998753
No 434
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=80.09 E-value=5.6 Score=31.05 Aligned_cols=78 Identities=6% Similarity=-0.092 Sum_probs=50.2
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~~ 110 (179)
.+++||=.|++ ||.-..+++++.. .+..|+.+|.++.. .-.++.++++|+++.+..++
T Consensus 8 ~~k~vlVTGas-~giG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 75 (260)
T 2ae2_A 8 EGCTALVTGGS-RGIGYGIVEELAS-----------LGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQE 75 (260)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence 46678877865 5555555554431 14689999987521 01357788999999876555
Q ss_pred HHhhcC---CCCccEEeeCCCCC
Q 030299 111 VIRHFD---GCKADLVVCDGAPD 130 (179)
Q Consensus 111 l~~~~~---~~~~D~VlsD~~~~ 130 (179)
+.+... .+.+|+|+++.+..
T Consensus 76 ~~~~~~~~~~g~id~lv~~Ag~~ 98 (260)
T 2ae2_A 76 LMNTVANHFHGKLNILVNNAGIV 98 (260)
T ss_dssp HHHHHHHHTTTCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCCEEEECCCCC
Confidence 543221 14699999998754
No 435
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=80.06 E-value=6.6 Score=31.59 Aligned_cols=73 Identities=16% Similarity=0.027 Sum_probs=48.7
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------------CCCCeeEEeccccch
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------------PIEGVIQVQGDITNA 105 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------------~~~~v~~i~gDi~~~ 105 (179)
++||=.| |+|+.-..+++++.. .+..|+++|..+.. ...++.++++|+++.
T Consensus 3 ~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~ 70 (348)
T 1ek6_A 3 EKVLVTG-GAGYIGSHTVLELLE-----------AGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQ 70 (348)
T ss_dssp SEEEEET-TTSHHHHHHHHHHHH-----------TTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCH
T ss_pred CEEEEEC-CCCHHHHHHHHHHHH-----------CCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCH
Confidence 4666666 457777776665531 14689999865421 024688999999998
Q ss_pred hhHHHHHhhcCCCCccEEeeCCCCC
Q 030299 106 RTAEVVIRHFDGCKADLVVCDGAPD 130 (179)
Q Consensus 106 ~~~~~l~~~~~~~~~D~VlsD~~~~ 130 (179)
+..+++.+.. .+|+|++.++..
T Consensus 71 ~~~~~~~~~~---~~d~vih~A~~~ 92 (348)
T 1ek6_A 71 GALQRLFKKY---SFMAVIHFAGLK 92 (348)
T ss_dssp HHHHHHHHHC---CEEEEEECCSCC
T ss_pred HHHHHHHHhc---CCCEEEECCCCc
Confidence 7766665432 689999987643
No 436
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=80.00 E-value=3.5 Score=31.88 Aligned_cols=78 Identities=13% Similarity=0.085 Sum_probs=52.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------CCCCeeEEeccccchhhHHHHH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------PIEGVIQVQGDITNARTAEVVI 112 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-------~~~~v~~i~gDi~~~~~~~~l~ 112 (179)
.++++||=.|++.| .-..+++++.. .+..|+.+|.++.. ...++.++.+|+++.+..+++.
T Consensus 12 ~~~k~vlVTGas~g-IG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 79 (249)
T 3f9i_A 12 LTGKTSLITGASSG-IGSAIARLLHK-----------LGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLI 79 (249)
T ss_dssp CTTCEEEETTTTSH-HHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHHHHHH-----------CCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHH
Confidence 45778888787654 55555554431 14789999987631 1246888899999988877777
Q ss_pred hhcCCCCccEEeeCCCCCC
Q 030299 113 RHFDGCKADLVVCDGAPDV 131 (179)
Q Consensus 113 ~~~~~~~~D~VlsD~~~~~ 131 (179)
+.+ .++|+|++..+...
T Consensus 80 ~~~--~~id~li~~Ag~~~ 96 (249)
T 3f9i_A 80 SKT--SNLDILVCNAGITS 96 (249)
T ss_dssp HTC--SCCSEEEECCC---
T ss_pred Hhc--CCCCEEEECCCCCC
Confidence 655 46999999886443
No 437
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=79.92 E-value=20 Score=28.18 Aligned_cols=77 Identities=12% Similarity=0.045 Sum_probs=49.3
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~~ 109 (179)
++.+||=.|++ ||.-..+++++.. .+..|++++.++.. ...++.++.+|+++.+..+
T Consensus 27 ~~k~vlITGas-ggIG~~la~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~ 94 (286)
T 1xu9_A 27 QGKKVIVTGAS-KGIGREMAYHLAK-----------MGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAE 94 (286)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHH
Confidence 36688877765 5555555554431 14689999987531 1125788999999987655
Q ss_pred HHHhhcC--CCCccEEeeC-CCC
Q 030299 110 VVIRHFD--GCKADLVVCD-GAP 129 (179)
Q Consensus 110 ~l~~~~~--~~~~D~VlsD-~~~ 129 (179)
++.+... -+++|+|+++ +..
T Consensus 95 ~~~~~~~~~~g~iD~li~naag~ 117 (286)
T 1xu9_A 95 QFVAQAGKLMGGLDMLILNHITN 117 (286)
T ss_dssp HHHHHHHHHHTSCSEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCccC
Confidence 5544321 1369999988 443
No 438
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=79.92 E-value=4.6 Score=31.46 Aligned_cols=70 Identities=14% Similarity=0.133 Sum_probs=49.0
Q ss_pred EEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-CCCeeEEeccccchhhHHHHHhhcCCCCccE
Q 030299 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-IEGVIQVQGDITNARTAEVVIRHFDGCKADL 122 (179)
Q Consensus 44 ~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~-~~~v~~i~gDi~~~~~~~~l~~~~~~~~~D~ 122 (179)
+||=.|+ +|+.-..+++++.. .+..|++++.++... ..++.++.+|+++.+...++.+ .+|+
T Consensus 4 ~ilVtGa-tG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~d~ 66 (267)
T 3ay3_A 4 RLLVTGA-AGGVGSAIRPHLGT-----------LAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLVK-----DCDG 66 (267)
T ss_dssp EEEEEST-TSHHHHHHGGGGGG-----------TEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHHT-----TCSE
T ss_pred eEEEECC-CCHHHHHHHHHHHh-----------CCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHHc-----CCCE
Confidence 4565554 57777887777642 135799998876432 2578899999999876555442 4899
Q ss_pred EeeCCCCC
Q 030299 123 VVCDGAPD 130 (179)
Q Consensus 123 VlsD~~~~ 130 (179)
|++..+..
T Consensus 67 vi~~a~~~ 74 (267)
T 3ay3_A 67 IIHLGGVS 74 (267)
T ss_dssp EEECCSCC
T ss_pred EEECCcCC
Confidence 99988754
No 439
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=79.88 E-value=3.4 Score=32.57 Aligned_cols=77 Identities=17% Similarity=0.055 Sum_probs=49.9
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~~ 110 (179)
.+++||=-|++.|.- ..+++++.. ...+|+.+|.++.. ....+.++++|+++.+..++
T Consensus 10 ~~k~vlVTGas~gIG-~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 77 (264)
T 3ucx_A 10 TDKVVVISGVGPALG-TTLARRCAE-----------QGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAH 77 (264)
T ss_dssp TTCEEEEESCCTTHH-HHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCcEEEEECCCcHHH-HHHHHHHHH-----------CcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence 467888888876644 333343321 14789999987521 12468899999999876555
Q ss_pred HHhhcC--CCCccEEeeCCCC
Q 030299 111 VIRHFD--GCKADLVVCDGAP 129 (179)
Q Consensus 111 l~~~~~--~~~~D~VlsD~~~ 129 (179)
+.+... -+++|+++++...
T Consensus 78 ~~~~~~~~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 78 LVDETMKAYGRVDVVINNAFR 98 (264)
T ss_dssp HHHHHHHHTSCCSEEEECCCS
T ss_pred HHHHHHHHcCCCcEEEECCCC
Confidence 544321 1369999998753
No 440
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=79.74 E-value=6.8 Score=31.02 Aligned_cols=80 Identities=14% Similarity=0.084 Sum_probs=51.0
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC--------------------------CCCCC
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM--------------------------APIEG 94 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~--------------------------~~~~~ 94 (179)
.++++|=-|++.| .-..+++++.. .+..|+.+|.++- .....
T Consensus 10 ~~k~~lVTGas~g-IG~aia~~la~-----------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (286)
T 3uve_A 10 EGKVAFVTGAARG-QGRSHAVRLAQ-----------EGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRR 77 (286)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHH-----------TTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCC
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHH-----------CCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCc
Confidence 4677888888765 44444444421 1578999998621 01236
Q ss_pred eeEEeccccchhhHHHHHhhcC--CCCccEEeeCCCCCCC
Q 030299 95 VIQVQGDITNARTAEVVIRHFD--GCKADLVVCDGAPDVT 132 (179)
Q Consensus 95 v~~i~gDi~~~~~~~~l~~~~~--~~~~D~VlsD~~~~~~ 132 (179)
+.++++|+++.+..+++.+... -+++|+++++.+....
T Consensus 78 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~ 117 (286)
T 3uve_A 78 IVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNG 117 (286)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred eEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCC
Confidence 7888999999876655554321 1369999999875443
No 441
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=79.68 E-value=3.9 Score=31.93 Aligned_cols=79 Identities=14% Similarity=0.171 Sum_probs=51.1
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------CCCCeeEEeccccchhhHHHHHh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------PIEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-------~~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
.++++|=.|++.| .-..+++++.. .+.+|+.+|.++.. ....+.++++|+++.+..+++.+
T Consensus 5 ~gk~vlVTGas~g-IG~a~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 72 (247)
T 3rwb_A 5 AGKTALVTGAAQG-IGKAIAARLAA-----------DGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFA 72 (247)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHH-----------TTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHH
Confidence 3567887887654 55555554431 15789999987631 12467888999999876555554
Q ss_pred hcC--CCCccEEeeCCCCCC
Q 030299 114 HFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 114 ~~~--~~~~D~VlsD~~~~~ 131 (179)
... -+++|+++++.+...
T Consensus 73 ~~~~~~g~id~lv~nAg~~~ 92 (247)
T 3rwb_A 73 EIQALTGGIDILVNNASIVP 92 (247)
T ss_dssp HHHHHHSCCSEEEECCCCCC
T ss_pred HHHHHCCCCCEEEECCCCCC
Confidence 321 136999999887543
No 442
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=79.66 E-value=4.8 Score=33.41 Aligned_cols=38 Identities=8% Similarity=-0.086 Sum_probs=28.1
Q ss_pred CCCCCEEEEEccCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC
Q 030299 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM 89 (179)
Q Consensus 39 l~~g~~VlDLgagp-Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~ 89 (179)
+++|++||=+|||+ |.....+++..+ ..+|+++|.++.
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~ 227 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAG-------------ASRIIGVGTHKD 227 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-------------CSEEEEECSCGG
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCeEEEECCCHH
Confidence 47899999999865 555556666665 238999998874
No 443
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=79.63 E-value=7.4 Score=31.54 Aligned_cols=72 Identities=19% Similarity=0.140 Sum_probs=50.3
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-----------CCCeeEEeccccchhhHHHH
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----------IEGVIQVQGDITNARTAEVV 111 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~-----------~~~v~~i~gDi~~~~~~~~l 111 (179)
++||=.|| +|..-..+++.+-. .+..|++++.++... ..+++++++|+++.+...++
T Consensus 11 ~~IlVtGa-tG~iG~~l~~~L~~-----------~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~ 78 (346)
T 3i6i_A 11 GRVLIAGA-TGFIGQFVATASLD-----------AHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKI 78 (346)
T ss_dssp CCEEEECT-TSHHHHHHHHHHHH-----------TTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred CeEEEECC-CcHHHHHHHHHHHH-----------CCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHH
Confidence 46777775 57777777665531 136799998876211 25899999999998776665
Q ss_pred HhhcCCCCccEEeeCCCC
Q 030299 112 IRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 112 ~~~~~~~~~D~VlsD~~~ 129 (179)
.+. .++|+|++.++.
T Consensus 79 ~~~---~~~d~Vi~~a~~ 93 (346)
T 3i6i_A 79 LKE---HEIDIVVSTVGG 93 (346)
T ss_dssp HHH---TTCCEEEECCCG
T ss_pred Hhh---CCCCEEEECCch
Confidence 543 368999998765
No 444
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=79.59 E-value=3.4 Score=32.68 Aligned_cols=79 Identities=14% Similarity=0.001 Sum_probs=51.0
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~~ 109 (179)
.+++||=-|++. |.-..+++++.. ....|+.+|.++.. ....+.++++|+++.+..+
T Consensus 19 ~~k~vlVTGas~-gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~ 86 (266)
T 4egf_A 19 DGKRALITGATK-GIGADIARAFAA-----------AGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPA 86 (266)
T ss_dssp TTCEEEETTTTS-HHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence 466777777765 455555554432 14789999987521 1246889999999987655
Q ss_pred HHHhhcC--CCCccEEeeCCCCCC
Q 030299 110 VVIRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 110 ~l~~~~~--~~~~D~VlsD~~~~~ 131 (179)
++.+... -+++|+++++.+...
T Consensus 87 ~~~~~~~~~~g~id~lv~nAg~~~ 110 (266)
T 4egf_A 87 ELARRAAEAFGGLDVLVNNAGISH 110 (266)
T ss_dssp HHHHHHHHHHTSCSEEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCcCC
Confidence 5544321 136999999886543
No 445
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=79.57 E-value=6.2 Score=31.28 Aligned_cols=78 Identities=6% Similarity=-0.089 Sum_probs=51.1
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~~ 109 (179)
.++++|=-|++ ||.-..+++++.. .+.+|+.+|.++.. .-..+.++++|+++.+..+
T Consensus 26 ~~k~~lVTGas-~GIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 93 (277)
T 4fc7_A 26 RDKVAFITGGG-SGIGFRIAEIFMR-----------HGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVM 93 (277)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHT-----------TTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH
Confidence 46788888876 4555555555532 25689999987521 1246888999999987655
Q ss_pred HHHhhcC--CCCccEEeeCCCCC
Q 030299 110 VVIRHFD--GCKADLVVCDGAPD 130 (179)
Q Consensus 110 ~l~~~~~--~~~~D~VlsD~~~~ 130 (179)
++.+... -+++|+|+++.+..
T Consensus 94 ~~~~~~~~~~g~id~lv~nAg~~ 116 (277)
T 4fc7_A 94 AAVDQALKEFGRIDILINCAAGN 116 (277)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCcCC
Confidence 5444321 13699999988643
No 446
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=79.52 E-value=4.7 Score=31.13 Aligned_cols=80 Identities=11% Similarity=-0.043 Sum_probs=50.6
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~~ 110 (179)
++.+||=.|+ .|+.-..+++++.. ..+..|+.++.++.. ...++.++.+|+++.+..++
T Consensus 3 ~~k~vlITGa-sggIG~~~a~~L~~----------~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~ 71 (276)
T 1wma_A 3 GIHVALVTGG-NKGIGLAIVRDLCR----------LFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRA 71 (276)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHH----------HSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH----------hcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHH
Confidence 4567776665 46666666655421 014689999877521 02367889999999876555
Q ss_pred HHhhcC--CCCccEEeeCCCCCC
Q 030299 111 VIRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 111 l~~~~~--~~~~D~VlsD~~~~~ 131 (179)
+.+.+. -+++|+|++..+...
T Consensus 72 ~~~~~~~~~g~id~li~~Ag~~~ 94 (276)
T 1wma_A 72 LRDFLRKEYGGLDVLVNNAGIAF 94 (276)
T ss_dssp HHHHHHHHHSSEEEEEECCCCCC
T ss_pred HHHHHHHhcCCCCEEEECCcccc
Confidence 554321 136999999886543
No 447
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=79.46 E-value=1.1 Score=32.19 Aligned_cols=68 Identities=18% Similarity=0.138 Sum_probs=46.6
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCeeEEeccccchhhHHHHHhhcCCC
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFDGC 118 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----~~~~v~~i~gDi~~~~~~~~l~~~~~~~ 118 (179)
++|+=+|+ |.+...+++.+.. .+..|+++|.++.. .-.|+..+.||.++.+..++. .-.
T Consensus 8 ~~viIiG~--G~~G~~la~~L~~-----------~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a----~i~ 70 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGEKLLA-----------SDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLA----HLE 70 (140)
T ss_dssp SCEEEECC--SHHHHHHHHHHHH-----------TTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHT----TGG
T ss_pred CCEEEECc--CHHHHHHHHHHHH-----------CCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhc----Ccc
Confidence 46777776 6677777666532 14689999999842 125888999999998764432 224
Q ss_pred CccEEeeCC
Q 030299 119 KADLVVCDG 127 (179)
Q Consensus 119 ~~D~VlsD~ 127 (179)
.+|+|++-.
T Consensus 71 ~ad~vi~~~ 79 (140)
T 3fwz_A 71 CAKWLILTI 79 (140)
T ss_dssp GCSEEEECC
T ss_pred cCCEEEEEC
Confidence 689988754
No 448
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=79.38 E-value=0.95 Score=41.95 Aligned_cols=55 Identities=18% Similarity=0.085 Sum_probs=39.2
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCeeEEeccccch
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNA 105 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~~~v~~i~gDi~~~ 105 (179)
.+|+||-||.||++.-+.+..... +..--.+.|+|+.+.+ .+++..+...|+.+.
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~--------~~~f~vv~AvE~d~~A~~Ty~~Nhp~~~~~~~di~~i 273 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALS--------GLKLETRWAVDFNSFACQSLKYNHPQTEVRNEKADEF 273 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHH--------TEEEEEEEEEESCHHHHHHHHHHCTTSEEEESCHHHH
T ss_pred CeEEEeCcCccHHHHHHHHhCccc--------CCceeEEEEEeCCHHHHHHHHHHCCCCceecCcHHHh
Confidence 479999999999999987653100 0000257899999953 367788889998775
No 449
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=79.27 E-value=11 Score=29.61 Aligned_cols=79 Identities=14% Similarity=0.072 Sum_probs=51.6
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------------CCCCeeEEeccccchhh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------PIEGVIQVQGDITNART 107 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-------------~~~~v~~i~gDi~~~~~ 107 (179)
.+++||=-|++. |.-..+++++.. .+..|+.++..... .-..+.++++|+++.+.
T Consensus 10 ~~k~vlVTGas~-GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~ 77 (262)
T 3ksu_A 10 KNKVIVIAGGIK-NLGALTAKTFAL-----------ESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEE 77 (262)
T ss_dssp TTCEEEEETCSS-HHHHHHHHHHTT-----------SSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHH-----------CCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHH
Confidence 466788788774 556666666643 25788888765321 12357888999999886
Q ss_pred HHHHHhhcCC--CCccEEeeCCCCCC
Q 030299 108 AEVVIRHFDG--CKADLVVCDGAPDV 131 (179)
Q Consensus 108 ~~~l~~~~~~--~~~D~VlsD~~~~~ 131 (179)
.+++.+...+ +++|+++++.+...
T Consensus 78 v~~~~~~~~~~~g~iD~lvnnAg~~~ 103 (262)
T 3ksu_A 78 VAKLFDFAEKEFGKVDIAINTVGKVL 103 (262)
T ss_dssp HHHHHHHHHHHHCSEEEEEECCCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 6555543211 36999999886543
No 450
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=79.22 E-value=11 Score=30.55 Aligned_cols=79 Identities=23% Similarity=0.121 Sum_probs=50.1
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------------------CCCCeeEE
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------------PIEGVIQV 98 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------------------~~~~v~~i 98 (179)
.+++||=-|++.| .-..+++++.. .+..|+.+|..... .-..+.++
T Consensus 45 ~gk~~lVTGas~G-IG~aia~~la~-----------~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (317)
T 3oec_A 45 QGKVAFITGAARG-QGRTHAVRLAQ-----------DGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIAR 112 (317)
T ss_dssp TTCEEEESSCSSH-HHHHHHHHHHH-----------TTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHH-----------CCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEE
Confidence 4667887787655 44444444421 15789999876311 12357888
Q ss_pred eccccchhhHHHHHhhcC--CCCccEEeeCCCCCC
Q 030299 99 QGDITNARTAEVVIRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 99 ~gDi~~~~~~~~l~~~~~--~~~~D~VlsD~~~~~ 131 (179)
++|+++.+..+++.+... -+++|+|+++.+...
T Consensus 113 ~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~ 147 (317)
T 3oec_A 113 QADVRDLASLQAVVDEALAEFGHIDILVSNVGISN 147 (317)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred ECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 999999876555554321 136999999887543
No 451
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=78.93 E-value=6.5 Score=31.31 Aligned_cols=80 Identities=16% Similarity=0.111 Sum_probs=50.9
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------------CCCCeeEEeccccchhhHH
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------------~~~~v~~i~gDi~~~~~~~ 109 (179)
+++||=-|++.| .-..+++++.. .+..|+.+|.+... ....+.++++|+++.+..+
T Consensus 25 ~k~~lVTGas~G-IG~~ia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 92 (281)
T 3v2h_A 25 TKTAVITGSTSG-IGLAIARTLAK-----------AGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIA 92 (281)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHHH-----------TTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHH
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHH-----------CCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHH
Confidence 567888887655 44444444421 14689999874311 1246888999999987655
Q ss_pred HHHhhcC--CCCccEEeeCCCCCCCC
Q 030299 110 VVIRHFD--GCKADLVVCDGAPDVTG 133 (179)
Q Consensus 110 ~l~~~~~--~~~~D~VlsD~~~~~~g 133 (179)
++.+... -+++|+|+++.+....+
T Consensus 93 ~~~~~~~~~~g~iD~lv~nAg~~~~~ 118 (281)
T 3v2h_A 93 DMMAMVADRFGGADILVNNAGVQFVE 118 (281)
T ss_dssp HHHHHHHHHTSSCSEEEECCCCCCCC
T ss_pred HHHHHHHHHCCCCCEEEECCCCCCCC
Confidence 5554321 13699999998754433
No 452
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=78.76 E-value=5.8 Score=30.99 Aligned_cols=83 Identities=20% Similarity=0.144 Sum_probs=52.1
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------------CCCCeeEEeccccchhh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------PIEGVIQVQGDITNART 107 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-------------~~~~v~~i~gDi~~~~~ 107 (179)
.++++|=-|++.| .-..+++++.. .+..|+.+|.++.. ....+.++++|+++.+.
T Consensus 6 ~~k~~lVTGas~G-IG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 73 (250)
T 3nyw_A 6 QKGLAIITGASQG-IGAVIAAGLAT-----------DGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTK 73 (250)
T ss_dssp CCCEEEEESTTSH-HHHHHHHHHHH-----------HTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHH
Confidence 3567887787755 44444443321 14689999987631 11568889999999876
Q ss_pred HHHHHhhcC--CCCccEEeeCCCCCCCCCC
Q 030299 108 AEVVIRHFD--GCKADLVVCDGAPDVTGLH 135 (179)
Q Consensus 108 ~~~l~~~~~--~~~~D~VlsD~~~~~~g~~ 135 (179)
.+++.+... -+++|+++++.+....+..
T Consensus 74 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 103 (250)
T 3nyw_A 74 ADTEIKDIHQKYGAVDILVNAAAMFMDGSL 103 (250)
T ss_dssp HHHHHHHHHHHHCCEEEEEECCCCCCCCCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCcCCCCCC
Confidence 555544321 1369999999876544443
No 453
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=78.68 E-value=5.1 Score=32.02 Aligned_cols=78 Identities=14% Similarity=0.081 Sum_probs=50.1
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------C-CCCeeEEeccccchhhHHHHHh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P-IEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~-~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
.+++||=.|++.| .-..+++++.. .+..|+.+|.++.. . ...+.++++|+++.+..+++.+
T Consensus 28 ~gk~vlVTGas~g-IG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 95 (277)
T 3gvc_A 28 AGKVAIVTGAGAG-IGLAVARRLAD-----------EGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVD 95 (277)
T ss_dssp TTCEEEETTTTST-HHHHHHHHHHH-----------TTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHH
Confidence 3667887787755 44444444321 14789999987531 1 2467889999999876555444
Q ss_pred hcC--CCCccEEeeCCCCC
Q 030299 114 HFD--GCKADLVVCDGAPD 130 (179)
Q Consensus 114 ~~~--~~~~D~VlsD~~~~ 130 (179)
... -+++|+|+++.+..
T Consensus 96 ~~~~~~g~iD~lvnnAg~~ 114 (277)
T 3gvc_A 96 ACVAAFGGVDKLVANAGVV 114 (277)
T ss_dssp HHHHHHSSCCEEEECCCCC
T ss_pred HHHHHcCCCCEEEECCCCC
Confidence 321 13699999988654
No 454
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=78.49 E-value=14 Score=28.98 Aligned_cols=77 Identities=12% Similarity=0.079 Sum_probs=52.8
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------------CCCCeeEEeccccchhhH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------------~~~~v~~i~gDi~~~~~~ 108 (179)
.+++||=-|++ ||.-..+++++.. .+..|+.+|.++.. +...+.++++|+++.+..
T Consensus 9 ~~k~~lVTGas-~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~ 76 (267)
T 3t4x_A 9 KGKTALVTGST-AGIGKAIATSLVA-----------EGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGC 76 (267)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHH-----------TTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHH
Confidence 46678877866 4555555555432 14789999987621 123467889999999887
Q ss_pred HHHHhhcCCCCccEEeeCCCCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGAPDV 131 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~~~~ 131 (179)
+++.+.+ +++|+++++.+...
T Consensus 77 ~~~~~~~--g~id~lv~nAg~~~ 97 (267)
T 3t4x_A 77 QDVIEKY--PKVDILINNLGIFE 97 (267)
T ss_dssp HHHHHHC--CCCSEEEECCCCCC
T ss_pred HHHHHhc--CCCCEEEECCCCCC
Confidence 7877766 36999999887543
No 455
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=78.45 E-value=10 Score=30.35 Aligned_cols=72 Identities=21% Similarity=0.164 Sum_probs=46.2
Q ss_pred EEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCC---CeEEEEeCCCCC-------C---CCCeeEEeccccchhhHHH
Q 030299 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL---PLIVAIDLQPMA-------P---IEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 44 ~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~---~~VvavD~~~~~-------~---~~~v~~i~gDi~~~~~~~~ 110 (179)
+||=.| |+|+....+++++-. ..+.+ ..|+++|..+.. . ..++.++++|+++.+..++
T Consensus 2 ~vlVTG-atG~iG~~l~~~L~~--------~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 72 (337)
T 1r6d_A 2 RLLVTG-GAGFIGSHFVRQLLA--------GAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAR 72 (337)
T ss_dssp EEEEET-TTSHHHHHHHHHHHH--------TSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHH
T ss_pred eEEEEC-CccHHHHHHHHHHHh--------hhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHH
Confidence 455555 457777777666531 00012 589999875421 1 2478899999999876554
Q ss_pred HHhhcCCCCccEEeeCCCC
Q 030299 111 VIRHFDGCKADLVVCDGAP 129 (179)
Q Consensus 111 l~~~~~~~~~D~VlsD~~~ 129 (179)
+. .++|+|++..+.
T Consensus 73 ~~-----~~~d~Vih~A~~ 86 (337)
T 1r6d_A 73 EL-----RGVDAIVHFAAE 86 (337)
T ss_dssp HT-----TTCCEEEECCSC
T ss_pred Hh-----cCCCEEEECCCc
Confidence 43 468999998764
No 456
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=78.45 E-value=3.5 Score=32.65 Aligned_cols=81 Identities=11% Similarity=0.035 Sum_probs=51.6
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-----CCCeeEEeccccchhhHHHHHhhc
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----IEGVIQVQGDITNARTAEVVIRHF 115 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~-----~~~v~~i~gDi~~~~~~~~l~~~~ 115 (179)
.+++||=.|++ ||.-..+++++.. .+..|+.+|.++... -.++.++++|+++.+..+++.+..
T Consensus 26 ~~k~vlVTGas-~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 93 (260)
T 3gem_A 26 SSAPILITGAS-QRVGLHCALRLLE-----------HGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLL 93 (260)
T ss_dssp -CCCEEESSTT-SHHHHHHHHHHHH-----------TTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-----------CCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHH
Confidence 35677777766 4555555554421 146899999877421 135889999999987655555432
Q ss_pred C--CCCccEEeeCCCCCCCC
Q 030299 116 D--GCKADLVVCDGAPDVTG 133 (179)
Q Consensus 116 ~--~~~~D~VlsD~~~~~~g 133 (179)
. -+.+|+|+++.+....+
T Consensus 94 ~~~~g~iD~lv~nAg~~~~~ 113 (260)
T 3gem_A 94 KTQTSSLRAVVHNASEWLAE 113 (260)
T ss_dssp HHHCSCCSEEEECCCCCCCC
T ss_pred HHhcCCCCEEEECCCccCCC
Confidence 1 13799999998754433
No 457
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=78.44 E-value=2.4 Score=33.72 Aligned_cols=78 Identities=15% Similarity=0.105 Sum_probs=50.9
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCeeEEeccccchhhHHHHHhh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRH 114 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~~~v~~i~gDi~~~~~~~~l~~~ 114 (179)
++++||=.|++ ||.-..+++++.. .+..|+.+|.++.. .+.++.++++|+++.+..+++.+.
T Consensus 8 ~~k~vlVTGas-~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 75 (270)
T 1yde_A 8 AGKVVVVTGGG-RGIGAGIVRAFVN-----------SGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSE 75 (270)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHH
Confidence 35678877866 5555555555432 14789999987531 235688999999998765555442
Q ss_pred cC--CCCccEEeeCCCCC
Q 030299 115 FD--GCKADLVVCDGAPD 130 (179)
Q Consensus 115 ~~--~~~~D~VlsD~~~~ 130 (179)
.. -+++|+|+++.+..
T Consensus 76 ~~~~~g~iD~lv~nAg~~ 93 (270)
T 1yde_A 76 TIRRFGRLDCVVNNAGHH 93 (270)
T ss_dssp HHHHHSCCCEEEECCCCC
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 21 13689999988643
No 458
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=78.43 E-value=4.8 Score=31.83 Aligned_cols=78 Identities=22% Similarity=0.096 Sum_probs=50.8
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-------CCCeeEEeccccchhhHHHHHh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-------IEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~-------~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
.++++|=-|++.| .-..+++++.. .+.+|+.+|.++... ..++.++++|+++.+..+++.+
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 77 (271)
T 3tzq_B 10 ENKVAIITGACGG-IGLETSRVLAR-----------AGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALID 77 (271)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHH-----------TTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHH-----------CCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHH
Confidence 3667887787654 55555554421 147899999887421 2467889999999876555544
Q ss_pred hcC--CCCccEEeeCCCCC
Q 030299 114 HFD--GCKADLVVCDGAPD 130 (179)
Q Consensus 114 ~~~--~~~~D~VlsD~~~~ 130 (179)
... -+.+|+++++.+..
T Consensus 78 ~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 78 FTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHHHHHSCCCEEEECCCCC
T ss_pred HHHHHcCCCCEEEECCCCC
Confidence 321 13699999988754
No 459
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=78.43 E-value=23 Score=27.94 Aligned_cols=68 Identities=21% Similarity=0.083 Sum_probs=46.3
Q ss_pred EEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCeeEEeccccchhhHHHHHhhcCCCC
Q 030299 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFDGCK 119 (179)
Q Consensus 44 ~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----~~~~v~~i~gDi~~~~~~~~l~~~~~~~~ 119 (179)
+||=.| |+|+.-..+++++.. .+.+++++..... ...++.++.+|+++ +...++.+ .
T Consensus 3 ~vlVTG-atG~iG~~l~~~L~~------------~g~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~-----~ 63 (313)
T 3ehe_A 3 LIVVTG-GAGFIGSHVVDKLSE------------SNEIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLK-----G 63 (313)
T ss_dssp CEEEET-TTSHHHHHHHHHHTT------------TSCEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHT-----T
T ss_pred EEEEEC-CCchHHHHHHHHHHh------------CCCEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhc-----C
Confidence 455455 678888888888753 3577777765432 13578999999998 65444432 6
Q ss_pred ccEEeeCCCCC
Q 030299 120 ADLVVCDGAPD 130 (179)
Q Consensus 120 ~D~VlsD~~~~ 130 (179)
+|.|++..+..
T Consensus 64 ~d~vih~a~~~ 74 (313)
T 3ehe_A 64 AEEVWHIAANP 74 (313)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999987643
No 460
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=78.36 E-value=23 Score=28.25 Aligned_cols=72 Identities=15% Similarity=0.080 Sum_probs=47.1
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------CCC----CeeEEeccccchhhHH
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIE----GVIQVQGDITNARTAE 109 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~--------~~~----~v~~i~gDi~~~~~~~ 109 (179)
+++||=.| |+|+.-..+++++-. .+..|++++.++.. .++ +++++++|+++.+...
T Consensus 5 ~~~vlVTG-atGfIG~~l~~~L~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 72 (337)
T 2c29_D 5 SETVCVTG-ASGFIGSWLVMRLLE-----------RGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFD 72 (337)
T ss_dssp -CEEEETT-TTSHHHHHHHHHHHH-----------TTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTH
T ss_pred CCEEEEEC-CchHHHHHHHHHHHH-----------CCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHH
Confidence 45677555 677777777666532 14678887766531 122 5788999999987655
Q ss_pred HHHhhcCCCCccEEeeCCCCC
Q 030299 110 VVIRHFDGCKADLVVCDGAPD 130 (179)
Q Consensus 110 ~l~~~~~~~~~D~VlsD~~~~ 130 (179)
++.+ .+|.|++.+++.
T Consensus 73 ~~~~-----~~d~Vih~A~~~ 88 (337)
T 2c29_D 73 EAIK-----GCTGVFHVATPM 88 (337)
T ss_dssp HHHT-----TCSEEEECCCCC
T ss_pred HHHc-----CCCEEEEecccc
Confidence 5442 589999988753
No 461
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=78.34 E-value=3.4 Score=34.35 Aligned_cols=38 Identities=18% Similarity=0.102 Sum_probs=27.3
Q ss_pred CCCCCEEEEEccCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC
Q 030299 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM 89 (179)
Q Consensus 39 l~~g~~VlDLgagp-Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~ 89 (179)
+++|++||-+|+|+ |..+..+++..+ ..+|+++|.++.
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~G-------------a~~Vi~~~~~~~ 228 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAG-------------AKRIIAVDLNPD 228 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEECSCGG
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEEcCCHH
Confidence 47899999999765 445555666654 238999998874
No 462
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=78.27 E-value=5.4 Score=31.19 Aligned_cols=66 Identities=18% Similarity=0.119 Sum_probs=49.6
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCeeEEeccccchhhHHHHHhhcCCC
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIRHFDGC 118 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~----~~~v~~i~gDi~~~~~~~~l~~~~~~~ 118 (179)
++||=.| + |..-..+++++-. .+..|++++.++... ..+++++++|+++.+ + .
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--------~--~ 62 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAP-----------QGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--------L--D 62 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGG-----------GTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--------C--T
T ss_pred CcEEEEC-C-cHHHHHHHHHHHH-----------CCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--------c--C
Confidence 5789899 5 9988888887742 146899999877431 268999999999953 2 4
Q ss_pred CccEEeeCCCCCC
Q 030299 119 KADLVVCDGAPDV 131 (179)
Q Consensus 119 ~~D~VlsD~~~~~ 131 (179)
++|+|++-.++..
T Consensus 63 ~~d~vi~~a~~~~ 75 (286)
T 3ius_A 63 GVTHLLISTAPDS 75 (286)
T ss_dssp TCCEEEECCCCBT
T ss_pred CCCEEEECCCccc
Confidence 6899999877543
No 463
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=78.24 E-value=9.7 Score=30.12 Aligned_cols=77 Identities=10% Similarity=0.010 Sum_probs=50.7
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------C-----CCCeeEEeccccchhhHHH
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P-----IEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~-----~~~v~~i~gDi~~~~~~~~ 110 (179)
+++||=.|++ |+.-..+++++.. .+..|+.+|.++.. . ..++.++++|+++.+..++
T Consensus 26 ~k~vlITGas-ggiG~~la~~L~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~ 93 (302)
T 1w6u_A 26 GKVAFITGGG-TGLGKGMTTLLSS-----------LGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQN 93 (302)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHH
T ss_pred CCEEEEECCC-chHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHH
Confidence 5678877765 5666666555432 14689999987531 0 2468899999999876555
Q ss_pred HHhhcC--CCCccEEeeCCCCC
Q 030299 111 VIRHFD--GCKADLVVCDGAPD 130 (179)
Q Consensus 111 l~~~~~--~~~~D~VlsD~~~~ 130 (179)
+.+... -+.+|+|++..+..
T Consensus 94 ~~~~~~~~~g~id~li~~Ag~~ 115 (302)
T 1w6u_A 94 TVSELIKVAGHPNIVINNAAGN 115 (302)
T ss_dssp HHHHHHHHTCSCSEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 544321 13689999988743
No 464
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=78.19 E-value=2.7 Score=33.87 Aligned_cols=79 Identities=15% Similarity=0.096 Sum_probs=52.0
Q ss_pred CCCEEEEEccCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgagp-Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---------~~~~v~~i~gDi~~~~~~~~ 110 (179)
.+++||=.|++. .|.-..+++++.. .+..|+.+|.++.. ...++.++++|+++.+..++
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 97 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCA-----------QGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDN 97 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH-----------TTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHH-----------CCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHH
Confidence 367888889864 3555555554432 15789999987621 12457789999999886665
Q ss_pred HHhhcCC--CCccEEeeCCCCC
Q 030299 111 VIRHFDG--CKADLVVCDGAPD 130 (179)
Q Consensus 111 l~~~~~~--~~~D~VlsD~~~~ 130 (179)
+.+...+ +.+|+++++.+..
T Consensus 98 ~~~~~~~~~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 98 MFKVLAEEWGSLDFVVHAVAFS 119 (296)
T ss_dssp HHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCcC
Confidence 5543311 3699999988653
No 465
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=78.18 E-value=6 Score=29.82 Aligned_cols=69 Identities=22% Similarity=0.187 Sum_probs=47.3
Q ss_pred EEEEEccCCChHHHHHHHHhC-CCCCCCCCCCCCCCCeEEEEeCCCC-C------CCCCeeEEeccccchhhHHHHHhhc
Q 030299 44 RVVDLCAAPGSWSQVLSRKLY-LPAKLSPDSREGDLPLIVAIDLQPM-A------PIEGVIQVQGDITNARTAEVVIRHF 115 (179)
Q Consensus 44 ~VlDLgagpGg~s~~l~~~~~-~~~~~~~~~~~~~~~~VvavD~~~~-~------~~~~v~~i~gDi~~~~~~~~l~~~~ 115 (179)
+||=.|+ +|+.-..+++++. . .+..|++++.++. . ...++.++++|+++.+..+++.+
T Consensus 7 ~vlVtGa-sg~iG~~~~~~l~~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-- 72 (221)
T 3r6d_A 7 YITILGA-AGQIAQXLTATLLTY-----------TDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVT-- 72 (221)
T ss_dssp EEEEEST-TSHHHHHHHHHHHHH-----------CCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHT--
T ss_pred EEEEEeC-CcHHHHHHHHHHHhc-----------CCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHc--
Confidence 4776674 5666665555442 1 1468999998764 2 34689999999999876655542
Q ss_pred CCCCccEEeeCCCC
Q 030299 116 DGCKADLVVCDGAP 129 (179)
Q Consensus 116 ~~~~~D~VlsD~~~ 129 (179)
.+|+|++..+.
T Consensus 73 ---~~d~vv~~ag~ 83 (221)
T 3r6d_A 73 ---NAEVVFVGAME 83 (221)
T ss_dssp ---TCSEEEESCCC
T ss_pred ---CCCEEEEcCCC
Confidence 58999998754
No 466
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=78.17 E-value=9 Score=29.82 Aligned_cols=78 Identities=15% Similarity=0.176 Sum_probs=50.1
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CC-CCeeEEeccccchhhHHHHHh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PI-EGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~-~~v~~i~gDi~~~~~~~~l~~ 113 (179)
.+++||=.|++ |+.-..+++++.. .+..|+.+|.++.. .+ .++.++++|+++.+..+++.+
T Consensus 11 ~~k~vlVTGas-~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~ 78 (263)
T 3ak4_A 11 SGRKAIVTGGS-KGIGAAIARALDK-----------AGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQ 78 (263)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHH
Confidence 36678888866 5555555555431 14689999987521 11 267889999999876555443
Q ss_pred hcC--CCCccEEeeCCCCC
Q 030299 114 HFD--GCKADLVVCDGAPD 130 (179)
Q Consensus 114 ~~~--~~~~D~VlsD~~~~ 130 (179)
... -+++|+|++..+..
T Consensus 79 ~~~~~~g~iD~lv~~Ag~~ 97 (263)
T 3ak4_A 79 KAIDALGGFDLLCANAGVS 97 (263)
T ss_dssp HHHHHHTCCCEEEECCCCC
T ss_pred HHHHHcCCCCEEEECCCcC
Confidence 221 13689999988754
No 467
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=77.97 E-value=13 Score=29.33 Aligned_cols=79 Identities=13% Similarity=0.052 Sum_probs=50.0
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CCCCCeeEEeccccchhhHHHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------APIEGVIQVQGDITNARTAEVV 111 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~~~~~v~~i~gDi~~~~~~~~l 111 (179)
.|++||=-|++.| .-..+++++.. .+..|+.+|..+. .....+.++++|+++.+..+++
T Consensus 30 ~gk~~lVTGas~G-IG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 97 (273)
T 3uf0_A 30 AGRTAVVTGAGSG-IGRAIAHGYAR-----------AGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANV 97 (273)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHH-----------TTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHH-----------CCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence 4678888887654 55555554421 1468999994431 1124578899999998765555
Q ss_pred HhhcC-CCCccEEeeCCCCCC
Q 030299 112 IRHFD-GCKADLVVCDGAPDV 131 (179)
Q Consensus 112 ~~~~~-~~~~D~VlsD~~~~~ 131 (179)
.+... .+++|+|+++.+...
T Consensus 98 ~~~~~~~g~iD~lv~nAg~~~ 118 (273)
T 3uf0_A 98 AEELAATRRVDVLVNNAGIIA 118 (273)
T ss_dssp HHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHhcCCCcEEEECCCCCC
Confidence 43221 136999999886543
No 468
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=77.95 E-value=3.9 Score=32.09 Aligned_cols=78 Identities=15% Similarity=0.146 Sum_probs=49.5
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------C---CCCeeEEeccccchhhH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P---IEGVIQVQGDITNARTA 108 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---------~---~~~v~~i~gDi~~~~~~ 108 (179)
.+++||=.|++ ||.-..+++++.. .+..|+.+|.++.. . ..++.++++|+++.+..
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v 73 (267)
T 2gdz_A 6 NGKVALVTGAA-QGIGRAFAEALLL-----------KGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQL 73 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHH
T ss_pred CCCEEEEECCC-CcHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHH
Confidence 45678888865 5555555554431 14789999877521 1 13578899999998765
Q ss_pred HHHHhhcC--CCCccEEeeCCCCC
Q 030299 109 EVVIRHFD--GCKADLVVCDGAPD 130 (179)
Q Consensus 109 ~~l~~~~~--~~~~D~VlsD~~~~ 130 (179)
+++.+... -+++|+|++..+..
T Consensus 74 ~~~~~~~~~~~g~id~lv~~Ag~~ 97 (267)
T 2gdz_A 74 RDTFRKVVDHFGRLDILVNNAGVN 97 (267)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 55443321 13689999988643
No 469
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=77.93 E-value=3.4 Score=34.01 Aligned_cols=73 Identities=12% Similarity=0.179 Sum_probs=49.7
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCC-CC-eEEEEeCCCCC--------CCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGD-LP-LIVAIDLQPMA--------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~-~~-~VvavD~~~~~--------~~~~v~~i~gDi~~~~~~~~ 110 (179)
.+++||=.|+ +|+....+++++-. . +. .|++++.++.. ...++.++.+|+++.+...+
T Consensus 20 ~~k~vlVTGa-tG~iG~~l~~~L~~-----------~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~ 87 (344)
T 2gn4_A 20 DNQTILITGG-TGSFGKCFVRKVLD-----------TTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNY 87 (344)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-----------HCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHh-----------hCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHH
Confidence 3568887664 57777777665521 1 23 89999987531 12589999999999876544
Q ss_pred HHhhcCCCCccEEeeCCCCC
Q 030299 111 VIRHFDGCKADLVVCDGAPD 130 (179)
Q Consensus 111 l~~~~~~~~~D~VlsD~~~~ 130 (179)
+. . ++|+|++..+..
T Consensus 88 ~~---~--~~D~Vih~Aa~~ 102 (344)
T 2gn4_A 88 AL---E--GVDICIHAAALK 102 (344)
T ss_dssp HT---T--TCSEEEECCCCC
T ss_pred HH---h--cCCEEEECCCCC
Confidence 43 2 689999988643
No 470
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=77.91 E-value=3.3 Score=32.78 Aligned_cols=74 Identities=14% Similarity=0.057 Sum_probs=48.0
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--CCCeeEEeccccchhhHHHHHhhcCCCCc
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--IEGVIQVQGDITNARTAEVVIRHFDGCKA 120 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~--~~~v~~i~gDi~~~~~~~~l~~~~~~~~~ 120 (179)
++||=.| |+|..-..+++++-. ..+...|+++|.++... .+++.++++|+++.+...++.+. ..+
T Consensus 3 ~~vlVtG-atG~iG~~l~~~L~~---------~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---~~~ 69 (312)
T 2yy7_A 3 PKILIIG-ACGQIGTELTQKLRK---------LYGTENVIASDIRKLNTDVVNSGPFEVVNALDFNQIEHLVEV---HKI 69 (312)
T ss_dssp CCEEEET-TTSHHHHHHHHHHHH---------HHCGGGEEEEESCCCSCHHHHSSCEEECCTTCHHHHHHHHHH---TTC
T ss_pred ceEEEEC-CccHHHHHHHHHHHH---------hCCCCEEEEEcCCCccccccCCCceEEecCCCHHHHHHHHhh---cCC
Confidence 4567666 457666666655421 00025799999776432 24678999999998766665543 268
Q ss_pred cEEeeCCCC
Q 030299 121 DLVVCDGAP 129 (179)
Q Consensus 121 D~VlsD~~~ 129 (179)
|+|++.++.
T Consensus 70 d~vih~a~~ 78 (312)
T 2yy7_A 70 TDIYLMAAL 78 (312)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCcc
Confidence 999998764
No 471
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=77.88 E-value=8.1 Score=30.59 Aligned_cols=79 Identities=9% Similarity=-0.009 Sum_probs=51.7
Q ss_pred CCCEEEEEccCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC--------CCCCCeeEEeccccchhhHHHH
Q 030299 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM--------APIEGVIQVQGDITNARTAEVV 111 (179)
Q Consensus 41 ~g~~VlDLgagp-Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~--------~~~~~v~~i~gDi~~~~~~~~l 111 (179)
++++||=.|++. +|.-..+++++.. .+..|+.+|.++. ....++.++++|+++.+..+++
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~ 93 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHR-----------EGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDL 93 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHH-----------TTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHH-----------cCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHH
Confidence 367888888752 3444444444421 1478999998872 1234688999999998866655
Q ss_pred HhhcC--CCCccEEeeCCCCC
Q 030299 112 IRHFD--GCKADLVVCDGAPD 130 (179)
Q Consensus 112 ~~~~~--~~~~D~VlsD~~~~ 130 (179)
.+... -+++|+|+++.+..
T Consensus 94 ~~~~~~~~g~id~li~nAg~~ 114 (280)
T 3nrc_A 94 FVELGKVWDGLDAIVHSIAFA 114 (280)
T ss_dssp HHHHHHHCSSCCEEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCccC
Confidence 54331 13699999988754
No 472
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=77.87 E-value=23 Score=27.67 Aligned_cols=79 Identities=19% Similarity=0.113 Sum_probs=50.6
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------C-----------CCCCeeEE
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------A-----------PIEGVIQV 98 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-----------~-----------~~~~v~~i 98 (179)
.+++||=-|++.| .-..+++++.. .+..|+.+|.++. + .-..+.++
T Consensus 12 ~gk~vlVTGas~g-IG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (278)
T 3sx2_A 12 TGKVAFITGAARG-QGRAHAVRLAA-----------DGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVAR 79 (278)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHH-----------TTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHH-----------CCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEE
Confidence 3667888887654 44444444421 1578999997621 0 02468889
Q ss_pred eccccchhhHHHHHhhcC--CCCccEEeeCCCCCC
Q 030299 99 QGDITNARTAEVVIRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 99 ~gDi~~~~~~~~l~~~~~--~~~~D~VlsD~~~~~ 131 (179)
++|+++.+..+++.+... -+.+|+++++.+...
T Consensus 80 ~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 114 (278)
T 3sx2_A 80 QADVRDRESLSAALQAGLDELGRLDIVVANAGIAP 114 (278)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred eCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 999999876555554321 136999999987543
No 473
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=77.85 E-value=8 Score=30.39 Aligned_cols=80 Identities=10% Similarity=-0.103 Sum_probs=51.0
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~~ 109 (179)
.+++||=.|++.| .-..+++++.. .+..|+.++..... .-..+.++++|+++.+..+
T Consensus 28 ~~k~vlITGas~g-IG~~la~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 95 (271)
T 4iin_A 28 TGKNVLITGASKG-IGAEIAKTLAS-----------MGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFI 95 (271)
T ss_dssp SCCEEEETTCSSH-HHHHHHHHHHH-----------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHH-----------CCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 4667887777655 54454444421 14689988875421 1236888999999987655
Q ss_pred HHHhhcC--CCCccEEeeCCCCCCC
Q 030299 110 VVIRHFD--GCKADLVVCDGAPDVT 132 (179)
Q Consensus 110 ~l~~~~~--~~~~D~VlsD~~~~~~ 132 (179)
++.+... .+++|+|+++.+....
T Consensus 96 ~~~~~~~~~~g~id~li~nAg~~~~ 120 (271)
T 4iin_A 96 EAIQTIVQSDGGLSYLVNNAGVVRD 120 (271)
T ss_dssp HHHHHHHHHHSSCCEEEECCCCCCC
T ss_pred HHHHHHHHhcCCCCEEEECCCcCCC
Confidence 5554321 1379999998875443
No 474
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=77.75 E-value=7 Score=30.48 Aligned_cols=79 Identities=14% Similarity=-0.021 Sum_probs=49.9
Q ss_pred CCCEEEEEccCCC-hHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhH
Q 030299 41 GVKRVVDLCAAPG-SWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 41 ~g~~VlDLgagpG-g~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~ 108 (179)
.+++||=.|++.| |.-..+++++.. .+..|+.++.++.. +..++.++++|+++.+..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 74 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHE-----------AGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEI 74 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH-----------TTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH-----------CCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHH
Confidence 4678888898732 233333333321 14689998877521 112688999999998766
Q ss_pred HHHHhhcCC--CCccEEeeCCCCC
Q 030299 109 EVVIRHFDG--CKADLVVCDGAPD 130 (179)
Q Consensus 109 ~~l~~~~~~--~~~D~VlsD~~~~ 130 (179)
+++.+...+ +.+|+|+++.+..
T Consensus 75 ~~~~~~~~~~~g~id~li~~Ag~~ 98 (266)
T 3oig_A 75 ETCFASIKEQVGVIHGIAHCIAFA 98 (266)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHhCCeeEEEEccccc
Confidence 555543321 3689999987654
No 475
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=77.70 E-value=8.5 Score=29.44 Aligned_cols=77 Identities=6% Similarity=-0.060 Sum_probs=49.8
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCeeEEeccccchhhHHHHH
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEVVI 112 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~---------~~~~v~~i~gDi~~~~~~~~l~ 112 (179)
+++||=.|+ .|+.-..+++++.. .+..|+.++.++.. ...++.++++|+++.+..+++.
T Consensus 6 ~k~vlVtGa-sggiG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 73 (251)
T 1zk4_A 6 GKVAIITGG-TLGIGLAIATKFVE-----------EGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLF 73 (251)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHH
T ss_pred CcEEEEeCC-CChHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHH
Confidence 556776675 45666666555432 14689999977521 1147889999999987655554
Q ss_pred hhcC--CCCccEEeeCCCCC
Q 030299 113 RHFD--GCKADLVVCDGAPD 130 (179)
Q Consensus 113 ~~~~--~~~~D~VlsD~~~~ 130 (179)
+... -+++|+|++..+..
T Consensus 74 ~~~~~~~~~id~li~~Ag~~ 93 (251)
T 1zk4_A 74 DATEKAFGPVSTLVNNAGIA 93 (251)
T ss_dssp HHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHhCCCCEEEECCCCC
Confidence 4321 13689999988654
No 476
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=77.65 E-value=9.4 Score=30.81 Aligned_cols=72 Identities=14% Similarity=0.142 Sum_probs=46.9
Q ss_pred EEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-------CC---CCCeeEEeccccchhhHHHHHh
Q 030299 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-------AP---IEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 44 ~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~-------~~---~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
+||=.|+ +|+.-..+++++.. .+...|+++|..+. .. ..++.++.+|+++.+...++.+
T Consensus 2 kvlVTGa-sG~iG~~l~~~L~~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 70 (361)
T 1kew_A 2 KILITGG-AGFIGSAVVRHIIK----------NTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFE 70 (361)
T ss_dssp EEEEEST-TSHHHHHHHHHHHH----------HCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHH
T ss_pred EEEEECC-CchHhHHHHHHHHh----------cCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHh
Confidence 4555554 56666666655421 01358999987541 11 2478899999999877666554
Q ss_pred hcCCCCccEEeeCCCC
Q 030299 114 HFDGCKADLVVCDGAP 129 (179)
Q Consensus 114 ~~~~~~~D~VlsD~~~ 129 (179)
. ..+|+|++.++.
T Consensus 71 ~---~~~d~vih~A~~ 83 (361)
T 1kew_A 71 Q---YQPDAVMHLAAE 83 (361)
T ss_dssp H---HCCSEEEECCSC
T ss_pred h---cCCCEEEECCCC
Confidence 3 268999998765
No 477
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=77.58 E-value=5.2 Score=30.59 Aligned_cols=79 Identities=8% Similarity=-0.048 Sum_probs=50.5
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~~ 109 (179)
++++||=.|++ |+....+++++.. .+.+|+.++.++.. ....+.++++|+++.+..+
T Consensus 6 ~~~~vlVtGas-ggiG~~la~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 73 (248)
T 2pnf_A 6 QGKVSLVTGST-RGIGRAIAEKLAS-----------AGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESIN 73 (248)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHH-----------TTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHH-----------CCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHH
Confidence 35677777765 5666666555432 14689999887521 1236788899999987655
Q ss_pred HHHhhcC--CCCccEEeeCCCCCC
Q 030299 110 VVIRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 110 ~l~~~~~--~~~~D~VlsD~~~~~ 131 (179)
++.+... -+++|+|++..+...
T Consensus 74 ~~~~~~~~~~~~~d~vi~~Ag~~~ 97 (248)
T 2pnf_A 74 KAFEEIYNLVDGIDILVNNAGITR 97 (248)
T ss_dssp HHHHHHHHHSSCCSEEEECCCCCC
T ss_pred HHHHHHHHhcCCCCEEEECCCCCC
Confidence 5544221 136999999886543
No 478
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=77.49 E-value=1.2 Score=33.37 Aligned_cols=69 Identities=16% Similarity=0.084 Sum_probs=46.8
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCC--eEEEEeCCCCCCCCCeeEEeccccchhhHHHHHhhcCCCC
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLP--LIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCK 119 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~--~VvavD~~~~~~~~~v~~i~gDi~~~~~~~~l~~~~~~~~ 119 (179)
+++||=.|+ +|+.-..+++.+.. ... .|++++.++....++++++.+|+++.+...+ .+
T Consensus 5 ~~~vlVtGa-tG~iG~~l~~~l~~-----------~g~~~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~---~~---- 65 (215)
T 2a35_A 5 PKRVLLAGA-TGLTGEHLLDRILS-----------EPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLD---GS---- 65 (215)
T ss_dssp CCEEEEECT-TSHHHHHHHHHHHH-----------CTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCC---SC----
T ss_pred CceEEEECC-CcHHHHHHHHHHHh-----------CCCCCeEEEEeCCCcccCCCceEEeccccCHHHHHH---hh----
Confidence 467887774 57666666665532 123 8999988775545688889999998764321 11
Q ss_pred ccEEeeCCCC
Q 030299 120 ADLVVCDGAP 129 (179)
Q Consensus 120 ~D~VlsD~~~ 129 (179)
+|+|++..+.
T Consensus 66 ~d~vi~~a~~ 75 (215)
T 2a35_A 66 IDTAFCCLGT 75 (215)
T ss_dssp CSEEEECCCC
T ss_pred hcEEEECeee
Confidence 8999998764
No 479
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=77.48 E-value=5.5 Score=31.21 Aligned_cols=81 Identities=16% Similarity=0.113 Sum_probs=51.1
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~~ 110 (179)
.++++|=-|++.| .-..+++++.. .+..|+.+|.++.. ....+.++++|+++.+..++
T Consensus 11 ~~k~vlVTGas~g-IG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 78 (256)
T 3gaf_A 11 NDAVAIVTGAAAG-IGRAIAGTFAK-----------AGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREA 78 (256)
T ss_dssp TTCEEEECSCSSH-HHHHHHHHHHH-----------HTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 4667887787755 44444443321 14689999987631 12468889999999876555
Q ss_pred HHhhcC--CCCccEEeeCCCCCCCC
Q 030299 111 VIRHFD--GCKADLVVCDGAPDVTG 133 (179)
Q Consensus 111 l~~~~~--~~~~D~VlsD~~~~~~g 133 (179)
+.+... -+++|+++++.+....+
T Consensus 79 ~~~~~~~~~g~id~lv~nAg~~~~~ 103 (256)
T 3gaf_A 79 VIKAALDQFGKITVLVNNAGGGGPK 103 (256)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCC
Confidence 544321 13699999998754433
No 480
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=77.47 E-value=7.8 Score=30.96 Aligned_cols=77 Identities=13% Similarity=0.200 Sum_probs=50.7
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------CCCCCeeEEeccccchhhHHHHHh---
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------APIEGVIQVQGDITNARTAEVVIR--- 113 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~------~~~~~v~~i~gDi~~~~~~~~l~~--- 113 (179)
++||=-|++.|.- ..+++++.. .+.+|+.+|.++. +...++.++++|+++.+..+++.+
T Consensus 3 K~vlVTGas~GIG-~aia~~la~-----------~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~ 70 (247)
T 3ged_A 3 RGVIVTGGGHGIG-KQICLDFLE-----------AGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAM 70 (247)
T ss_dssp CEEEEESTTSHHH-HHHHHHHHH-----------TTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEecCCCHHH-HHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHH
Confidence 3566667776644 444444321 2579999998863 235678899999999876555543
Q ss_pred -hcCCCCccEEeeCCCCCCCC
Q 030299 114 -HFDGCKADLVVCDGAPDVTG 133 (179)
Q Consensus 114 -~~~~~~~D~VlsD~~~~~~g 133 (179)
.+ ++.|+++.+......+
T Consensus 71 ~~~--g~iDiLVNNAG~~~~~ 89 (247)
T 3ged_A 71 EKL--QRIDVLVNNACRGSKG 89 (247)
T ss_dssp HHH--SCCCEEEECCCCCCCC
T ss_pred HHc--CCCCEEEECCCCCCCC
Confidence 44 3699999988654433
No 481
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=77.32 E-value=5.3 Score=31.64 Aligned_cols=79 Identities=8% Similarity=0.064 Sum_probs=50.6
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------CCCCeeEEeccccchhhHHHHHh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------PIEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-------~~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
.+++||=-|++.| .-..+++++.. .+..|+.+|.++.. ....+.++++|+++.+..+++.+
T Consensus 26 ~gk~vlVTGas~g-IG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 93 (266)
T 3grp_A 26 TGRKALVTGATGG-IGEAIARCFHA-----------QGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAE 93 (266)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHH
Confidence 4667887777654 55555554421 14689888877531 12468889999999876655554
Q ss_pred hcCC--CCccEEeeCCCCCC
Q 030299 114 HFDG--CKADLVVCDGAPDV 131 (179)
Q Consensus 114 ~~~~--~~~D~VlsD~~~~~ 131 (179)
...+ +++|+|+++.+...
T Consensus 94 ~~~~~~g~iD~lvnnAg~~~ 113 (266)
T 3grp_A 94 VAEREMEGIDILVNNAGITR 113 (266)
T ss_dssp HHHHHHTSCCEEEECCCCC-
T ss_pred HHHHHcCCCCEEEECCCCCC
Confidence 3211 36999999887543
No 482
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=77.20 E-value=10 Score=29.01 Aligned_cols=70 Identities=20% Similarity=0.194 Sum_probs=51.5
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCeeEEeccccchhhHHHHHhhcCCC
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFDGC 118 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----~~~~v~~i~gDi~~~~~~~~l~~~~~~~ 118 (179)
.-|||||-|.|----++.+.++ +-.|+++|-.--. .++--.+++||+.+.- ......+ +.
T Consensus 42 GpVlElGLGNGRTydHLRe~~P-------------~R~I~vfDR~~~~hp~~~P~~e~~ilGdi~~tL--~~~~~r~-g~ 105 (174)
T 3iht_A 42 GPVYELGLGNGRTYHHLRQHVQ-------------GREIYVFERAVASHPDSTPPEAQLILGDIRETL--PATLERF-GA 105 (174)
T ss_dssp SCEEEECCTTCHHHHHHHHHCC-------------SSCEEEEESSCCCCGGGCCCGGGEEESCHHHHH--HHHHHHH-CS
T ss_pred CceEEecCCCChhHHHHHHhCC-------------CCcEEEEEeeeccCCCCCCchHheecccHHHHH--HHHHHhc-CC
Confidence 3699999999999999999987 5789999966432 1234458899998753 2333344 45
Q ss_pred CccEEeeCCC
Q 030299 119 KADLVVCDGA 128 (179)
Q Consensus 119 ~~D~VlsD~~ 128 (179)
+.-++-+|..
T Consensus 106 ~a~LaHaD~G 115 (174)
T 3iht_A 106 TASLVHADLG 115 (174)
T ss_dssp CEEEEEECCC
T ss_pred ceEEEEeecC
Confidence 7888888875
No 483
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=77.20 E-value=3.9 Score=32.72 Aligned_cols=74 Identities=12% Similarity=-0.105 Sum_probs=49.1
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-----------CCCeeEE-eccccchhhH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----------IEGVIQV-QGDITNARTA 108 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~-----------~~~v~~i-~gDi~~~~~~ 108 (179)
++++||=.|++ |+.-..+++++-. .+..|++++.++... ..+++++ ++|+++.+..
T Consensus 10 ~~~~vlVTGat-G~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~ 77 (342)
T 1y1p_A 10 EGSLVLVTGAN-GFVASHVVEQLLE-----------HGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAY 77 (342)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTT
T ss_pred CCCEEEEECCc-cHHHHHHHHHHHH-----------CCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHH
Confidence 46788877754 6666666665531 146899998765210 1578888 8999997654
Q ss_pred HHHHhhcCCCCccEEeeCCCCCC
Q 030299 109 EVVIRHFDGCKADLVVCDGAPDV 131 (179)
Q Consensus 109 ~~l~~~~~~~~~D~VlsD~~~~~ 131 (179)
+++. ..+|+|++.+++..
T Consensus 78 ~~~~-----~~~d~vih~A~~~~ 95 (342)
T 1y1p_A 78 DEVI-----KGAAGVAHIASVVS 95 (342)
T ss_dssp TTTT-----TTCSEEEECCCCCS
T ss_pred HHHH-----cCCCEEEEeCCCCC
Confidence 3322 26899999887543
No 484
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=77.10 E-value=9 Score=29.59 Aligned_cols=80 Identities=9% Similarity=-0.048 Sum_probs=48.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhH
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~ 108 (179)
.++++||=.|++. |.-..+++++.. .+..|+.++..... ....+.++++|+++.+..
T Consensus 11 ~~~k~vlITGas~-giG~~ia~~l~~-----------~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 78 (256)
T 3ezl_A 11 MSQRIAYVTGGMG-GIGTSICQRLHK-----------DGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDST 78 (256)
T ss_dssp --CEEEEETTTTS-HHHHHHHHHHHH-----------TTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHHHHH-----------CCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHH
Confidence 3466777777664 555555554432 14678887733321 124688899999998765
Q ss_pred HHHHhhcC--CCCccEEeeCCCCCC
Q 030299 109 EVVIRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 109 ~~l~~~~~--~~~~D~VlsD~~~~~ 131 (179)
+++.+... -+++|+|+++.+...
T Consensus 79 ~~~~~~~~~~~g~id~lv~~Ag~~~ 103 (256)
T 3ezl_A 79 KQAFDKVKAEVGEIDVLVNNAGITR 103 (256)
T ss_dssp HHHHHHHHHHTCCEEEEEECCCCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCC
Confidence 55544321 136999999886543
No 485
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=77.05 E-value=6.3 Score=30.75 Aligned_cols=78 Identities=13% Similarity=0.005 Sum_probs=49.6
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-C-----------CCCeeEEeccccchhhHH
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-P-----------IEGVIQVQGDITNARTAE 109 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-~-----------~~~v~~i~gDi~~~~~~~ 109 (179)
+++||=.|++ ||.-..+++++.. .+..|+.+|.++.. . ..++.++++|+++.+..+
T Consensus 4 ~k~vlVTGas-~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 71 (260)
T 1x1t_A 4 GKVAVVTGST-SGIGLGIATALAA-----------QGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVR 71 (260)
T ss_dssp TCEEEETTCS-SHHHHHHHHHHHH-----------TTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHH-----------cCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHH
Confidence 5567776765 5555555555432 14689999887632 0 235788899999987655
Q ss_pred HHHhhcC--CCCccEEeeCCCCCC
Q 030299 110 VVIRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 110 ~l~~~~~--~~~~D~VlsD~~~~~ 131 (179)
++.+... -+++|+|+++.+...
T Consensus 72 ~~~~~~~~~~g~iD~lv~~Ag~~~ 95 (260)
T 1x1t_A 72 GLVDNAVRQMGRIDILVNNAGIQH 95 (260)
T ss_dssp HHHHHHHHHHSCCSEEEECCCCCC
T ss_pred HHHHHHHHhcCCCCEEEECCCCCC
Confidence 5544221 136999999887543
No 486
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=76.94 E-value=6.8 Score=28.17 Aligned_cols=71 Identities=20% Similarity=0.116 Sum_probs=45.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--C---CCCeeEEeccccchhhHHHHHhh
Q 030299 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--P---IEGVIQVQGDITNARTAEVVIRH 114 (179)
Q Consensus 40 ~~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~--~---~~~v~~i~gDi~~~~~~~~l~~~ 114 (179)
.++++|+=+|+ |.+...+++.+.. .+..|+.+|.++.. . ..|+..+.+|..+.+...+
T Consensus 17 ~~~~~v~IiG~--G~iG~~la~~L~~-----------~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~---- 79 (155)
T 2g1u_A 17 QKSKYIVIFGC--GRLGSLIANLASS-----------SGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKE---- 79 (155)
T ss_dssp CCCCEEEEECC--SHHHHHHHHHHHH-----------TTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHT----
T ss_pred cCCCcEEEECC--CHHHHHHHHHHHh-----------CCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHH----
Confidence 45788998886 6666666655431 13589999988742 1 2467778888877553221
Q ss_pred cCCCCccEEeeCC
Q 030299 115 FDGCKADLVVCDG 127 (179)
Q Consensus 115 ~~~~~~D~VlsD~ 127 (179)
..-..+|+|+.-.
T Consensus 80 ~~~~~ad~Vi~~~ 92 (155)
T 2g1u_A 80 CGMEKADMVFAFT 92 (155)
T ss_dssp TTGGGCSEEEECS
T ss_pred cCcccCCEEEEEe
Confidence 1123689988754
No 487
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=76.92 E-value=2.1 Score=34.58 Aligned_cols=79 Identities=14% Similarity=0.041 Sum_probs=51.1
Q ss_pred CCCEEEEEccCCC-hHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CCCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAAPG-SWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------APIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgagpG-g~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~---------~~~~~v~~i~gDi~~~~~~~~ 110 (179)
.+++||=.|++.| |.-..+++++.. ....|+.++.++. ....++.++++|+++.+..++
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 98 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAARE-----------AGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDA 98 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHH-----------TTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH-----------CCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHH
Confidence 4678888898854 344444444321 1468998887742 012468889999999886665
Q ss_pred HHhhcC--CCCccEEeeCCCCC
Q 030299 111 VIRHFD--GCKADLVVCDGAPD 130 (179)
Q Consensus 111 l~~~~~--~~~~D~VlsD~~~~ 130 (179)
+.+... -+.+|+++++.+..
T Consensus 99 ~~~~~~~~~g~iD~lVnnAG~~ 120 (293)
T 3grk_A 99 VFETLEKKWGKLDFLVHAIGFS 120 (293)
T ss_dssp HHHHHHHHTSCCSEEEECCCCC
T ss_pred HHHHHHHhcCCCCEEEECCccC
Confidence 554331 13699999988643
No 488
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=76.77 E-value=17 Score=28.61 Aligned_cols=67 Identities=18% Similarity=0.011 Sum_probs=44.7
Q ss_pred EEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCeeEEeccccchhhHHHHHhhcCCCC
Q 030299 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFDGCK 119 (179)
Q Consensus 44 ~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----~~~~v~~i~gDi~~~~~~~~l~~~~~~~~ 119 (179)
+||=.| |+|+.-..+++++.. .+..|+++|..+.. ...+++++.+|+++.+ .. +.+. .
T Consensus 2 ~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~---~~~~--~ 63 (312)
T 3ko8_A 2 RIVVTG-GAGFIGSHLVDKLVE-----------LGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WG---AGIK--G 63 (312)
T ss_dssp EEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TT---TTCC--C
T ss_pred EEEEEC-CCChHHHHHHHHHHh-----------CCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HH---hhcC--C
Confidence 455555 457777777766532 14689999987643 1358899999999976 32 2232 2
Q ss_pred ccEEeeCCCC
Q 030299 120 ADLVVCDGAP 129 (179)
Q Consensus 120 ~D~VlsD~~~ 129 (179)
|+|++..+.
T Consensus 64 -d~vih~A~~ 72 (312)
T 3ko8_A 64 -DVVFHFAAN 72 (312)
T ss_dssp -SEEEECCSS
T ss_pred -CEEEECCCC
Confidence 999998864
No 489
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=76.66 E-value=5.6 Score=31.88 Aligned_cols=77 Identities=13% Similarity=0.087 Sum_probs=49.7
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCeeEEeccccchhhHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-----------~~~~v~~i~gDi~~~~~~~ 109 (179)
.+++||=.|++.| .-..+++++.. .+..|+.+|.++.. .-..+.++++|+++.+..+
T Consensus 46 ~gk~vlVTGas~G-IG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 113 (291)
T 3ijr_A 46 KGKNVLITGGDSG-IGRAVSIAFAK-----------EGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCK 113 (291)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHH-----------TTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHH-----------CCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence 3678888887655 54555554421 14689999887631 1246888999999987655
Q ss_pred HHHhhcC--CCCccEEeeCCCC
Q 030299 110 VVIRHFD--GCKADLVVCDGAP 129 (179)
Q Consensus 110 ~l~~~~~--~~~~D~VlsD~~~ 129 (179)
++.+... -+.+|+++++.+.
T Consensus 114 ~~~~~~~~~~g~iD~lvnnAg~ 135 (291)
T 3ijr_A 114 DIVQETVRQLGSLNILVNNVAQ 135 (291)
T ss_dssp HHHHHHHHHHSSCCEEEECCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 5443221 1369999998754
No 490
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=76.61 E-value=25 Score=27.57 Aligned_cols=80 Identities=13% Similarity=0.085 Sum_probs=50.2
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC----------C-------------CCCCeeE
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----------A-------------PIEGVIQ 97 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~----------~-------------~~~~v~~ 97 (179)
.++++|=-|++.| .-..+++++.. .+..|+.+|..+. . ....+.+
T Consensus 10 ~~k~~lVTGas~G-IG~a~a~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (277)
T 3tsc_A 10 EGRVAFITGAARG-QGRAHAVRMAA-----------EGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVA 77 (277)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHH-----------TTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEECCccH-HHHHHHHHHHH-----------cCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEE
Confidence 3667888887755 44444444421 1578999997421 0 1245788
Q ss_pred EeccccchhhHHHHHhhcC--CCCccEEeeCCCCCCC
Q 030299 98 VQGDITNARTAEVVIRHFD--GCKADLVVCDGAPDVT 132 (179)
Q Consensus 98 i~gDi~~~~~~~~l~~~~~--~~~~D~VlsD~~~~~~ 132 (179)
+++|+++.+..+++.+... -+++|+++++.+....
T Consensus 78 ~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~ 114 (277)
T 3tsc_A 78 AVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAP 114 (277)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 8999999876555544321 1369999999875443
No 491
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=76.57 E-value=3.6 Score=31.94 Aligned_cols=77 Identities=17% Similarity=0.108 Sum_probs=48.9
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCe-EEEEeCCCCC----------CCCCeeEEeccccch-hhH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPL-IVAIDLQPMA----------PIEGVIQVQGDITNA-RTA 108 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~-VvavD~~~~~----------~~~~v~~i~gDi~~~-~~~ 108 (179)
++++||=.|++ ||.-..+++++.. .+.. |+.+|.++.. +-.++.++.+|+++. +..
T Consensus 4 ~~k~vlVtGas-~gIG~~~a~~l~~-----------~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~ 71 (254)
T 1sby_A 4 TNKNVIFVAAL-GGIGLDTSRELVK-----------RNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAES 71 (254)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHH
T ss_pred CCcEEEEECCC-ChHHHHHHHHHHH-----------CCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHH
Confidence 35678878874 7777777666532 1344 8888877621 113578889999987 554
Q ss_pred HHHHhhcC--CCCccEEeeCCCC
Q 030299 109 EVVIRHFD--GCKADLVVCDGAP 129 (179)
Q Consensus 109 ~~l~~~~~--~~~~D~VlsD~~~ 129 (179)
+++.+... -+++|+|++..+.
T Consensus 72 ~~~~~~~~~~~g~id~lv~~Ag~ 94 (254)
T 1sby_A 72 KKLLKKIFDQLKTVDILINGAGI 94 (254)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCcc
Confidence 44433211 1368999998864
No 492
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=76.52 E-value=4.6 Score=31.52 Aligned_cols=80 Identities=11% Similarity=0.036 Sum_probs=51.1
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------CCCCeeEEeccccchhhHHHHHh
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------PIEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-------~~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
.++++|=-|++. |.-..+++++.. .+.+|+.+|.++.. ....+.++++|+++.+..+++.+
T Consensus 8 ~gk~~lVTGas~-gIG~a~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 75 (248)
T 3op4_A 8 EGKVALVTGASR-GIGKAIAELLAE-----------RGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLK 75 (248)
T ss_dssp TTCEEEESSCSS-HHHHHHHHHHHH-----------TTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHH
Confidence 466788778765 455555554432 15789999987631 01356788999999876555554
Q ss_pred hcC--CCCccEEeeCCCCCCC
Q 030299 114 HFD--GCKADLVVCDGAPDVT 132 (179)
Q Consensus 114 ~~~--~~~~D~VlsD~~~~~~ 132 (179)
... -+++|+++++.+....
T Consensus 76 ~~~~~~g~iD~lv~nAg~~~~ 96 (248)
T 3op4_A 76 AITDEFGGVDILVNNAGITRD 96 (248)
T ss_dssp HHHHHHCCCSEEEECCCCCCC
T ss_pred HHHHHcCCCCEEEECCCCCCC
Confidence 321 1369999999875443
No 493
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=76.52 E-value=9.6 Score=30.55 Aligned_cols=79 Identities=19% Similarity=0.072 Sum_probs=50.3
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------------------CCCCeeEE
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------------PIEGVIQV 98 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------------------~~~~v~~i 98 (179)
.++++|=-|++.| .-..+++++.. .+..|+.+|.++.. .-..+.++
T Consensus 27 ~gk~~lVTGas~G-IG~aia~~la~-----------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (299)
T 3t7c_A 27 EGKVAFITGAARG-QGRSHAITLAR-----------EGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIAS 94 (299)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHH-----------TTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHH-----------CCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEE
Confidence 3667888887765 44444444321 15789999987310 12468889
Q ss_pred eccccchhhHHHHHhhcC--CCCccEEeeCCCCCC
Q 030299 99 QGDITNARTAEVVIRHFD--GCKADLVVCDGAPDV 131 (179)
Q Consensus 99 ~gDi~~~~~~~~l~~~~~--~~~~D~VlsD~~~~~ 131 (179)
++|+++.+..+++.+... -+.+|+++++.+...
T Consensus 95 ~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~ 129 (299)
T 3t7c_A 95 QVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALAS 129 (299)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred ECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 999999876555554321 136999999886443
No 494
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=76.50 E-value=6 Score=32.88 Aligned_cols=38 Identities=13% Similarity=-0.014 Sum_probs=27.5
Q ss_pred CCCCCEEEEEccCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC
Q 030299 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM 89 (179)
Q Consensus 39 l~~g~~VlDLgagp-Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~ 89 (179)
+++|++||=+|||+ |..+..+++..+ ..+|+++|.++.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~ 231 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAG-------------ASRIIAIDINGE 231 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEECSCGG
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCeEEEEcCCHH
Confidence 47899999999865 444555666654 238999998874
No 495
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=76.26 E-value=5.8 Score=30.19 Aligned_cols=77 Identities=12% Similarity=0.077 Sum_probs=49.7
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCeeEEeccccchhhHHHHHhhc
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRHF 115 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------~~~~v~~i~gDi~~~~~~~~l~~~~ 115 (179)
+++||=.|++ |+....+++++.. .+..|++++.++.. .+.++.++++|+++.+..+++.+..
T Consensus 5 ~k~vlVtGas-ggiG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 72 (234)
T 2ehd_A 5 KGAVLITGAS-RGIGEATARLLHA-----------KGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAM 72 (234)
T ss_dssp CCEEEESSTT-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHH
Confidence 4567766654 6666666665532 14689999877531 1347889999999987655554422
Q ss_pred C--CCCccEEeeCCCCC
Q 030299 116 D--GCKADLVVCDGAPD 130 (179)
Q Consensus 116 ~--~~~~D~VlsD~~~~ 130 (179)
. -+++|+|++..+..
T Consensus 73 ~~~~~~id~li~~Ag~~ 89 (234)
T 2ehd_A 73 EEAFGELSALVNNAGVG 89 (234)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCcC
Confidence 1 13689999988643
No 496
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=76.16 E-value=2.4 Score=35.59 Aligned_cols=74 Identities=20% Similarity=0.151 Sum_probs=42.4
Q ss_pred CCCCCEEEEEccCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCeeEEecccc---chhhHHH
Q 030299 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDIT---NARTAEV 110 (179)
Q Consensus 39 l~~g~~VlDLgagp-Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----~~~~v~~i~gDi~---~~~~~~~ 110 (179)
+++|++||-+|+|+ |..+..+++..+ ..+|+++|.++.+ .--|+..+ .|.. +.+..++
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~ 258 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLG-------------AENVIVIAGSPNRLKLAEEIGADLT-LNRRETSVEERRKA 258 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTT-------------BSEEEEEESCHHHHHHHHHTTCSEE-EETTTSCHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcC-------------CceEEEEcCCHHHHHHHHHcCCcEE-EeccccCcchHHHH
Confidence 57899999999654 333444555543 1489999988732 01233221 1222 3333445
Q ss_pred HHhhcCCCCccEEeeC
Q 030299 111 VIRHFDGCKADLVVCD 126 (179)
Q Consensus 111 l~~~~~~~~~D~VlsD 126 (179)
+.+...+.++|+|+-.
T Consensus 259 v~~~~~g~g~Dvvid~ 274 (380)
T 1vj0_A 259 IMDITHGRGADFILEA 274 (380)
T ss_dssp HHHHTTTSCEEEEEEC
T ss_pred HHHHhCCCCCcEEEEC
Confidence 5554455579998854
No 497
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=76.10 E-value=4.7 Score=32.27 Aligned_cols=77 Identities=14% Similarity=0.088 Sum_probs=50.1
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCeeEEeccccchhhHHH
Q 030299 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 41 ~g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~----------~~~~v~~i~gDi~~~~~~~~ 110 (179)
++.+||=-|++.| .-..+++++.. .+..|+.+|.++.. ....+.++++|+++.+..++
T Consensus 27 ~~k~~lVTGas~G-IG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~ 94 (283)
T 3v8b_A 27 PSPVALITGAGSG-IGRATALALAA-----------DGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRN 94 (283)
T ss_dssp CCCEEEEESCSSH-HHHHHHHHHHH-----------TTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Confidence 4667888887655 44444444431 15789999987621 12467889999999876555
Q ss_pred HHhhcC--CCCccEEeeCCCC
Q 030299 111 VIRHFD--GCKADLVVCDGAP 129 (179)
Q Consensus 111 l~~~~~--~~~~D~VlsD~~~ 129 (179)
+.+... -+++|+++++.+.
T Consensus 95 ~~~~~~~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 95 AVRDLVLKFGHLDIVVANAGI 115 (283)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHhCCCCEEEECCCC
Confidence 544321 1369999998864
No 498
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=76.07 E-value=26 Score=27.44 Aligned_cols=71 Identities=10% Similarity=0.047 Sum_probs=46.7
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------------CCCCeeEEeccccchhhHHH
Q 030299 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------PIEGVIQVQGDITNARTAEV 110 (179)
Q Consensus 43 ~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~------------~~~~v~~i~gDi~~~~~~~~ 110 (179)
++||=.|+ +|.....+++.+-. .+..|++++.++.. ...+++++++|+++.+...+
T Consensus 5 ~~ilVtGa-tG~iG~~l~~~L~~-----------~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~ 72 (313)
T 1qyd_A 5 SRVLIVGG-TGYIGKRIVNASIS-----------LGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVD 72 (313)
T ss_dssp CCEEEEST-TSTTHHHHHHHHHH-----------TTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHH
T ss_pred CEEEEEcC-CcHHHHHHHHHHHh-----------CCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHH
Confidence 46776664 56666655554421 13679998877421 13589999999999876555
Q ss_pred HHhhcCCCCccEEeeCCCCC
Q 030299 111 VIRHFDGCKADLVVCDGAPD 130 (179)
Q Consensus 111 l~~~~~~~~~D~VlsD~~~~ 130 (179)
..+ ++|.|++..++.
T Consensus 73 ~~~-----~~d~vi~~a~~~ 87 (313)
T 1qyd_A 73 ALK-----QVDVVISALAGG 87 (313)
T ss_dssp HHT-----TCSEEEECCCCS
T ss_pred HHh-----CCCEEEECCccc
Confidence 442 589999877643
No 499
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=76.05 E-value=14 Score=28.53 Aligned_cols=77 Identities=12% Similarity=0.020 Sum_probs=49.3
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------C-CCCeeEEeccccchhhHHHHHh
Q 030299 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------P-IEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 42 g~~VlDLgagpGg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~-------~-~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
+++||=.|++ |+.-..+++++.. .+..|+.+|.++.+ . ..++.++++|+++.+..+++.+
T Consensus 4 ~k~vlVTGas-~giG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~ 71 (255)
T 2q2v_A 4 GKTALVTGST-SGIGLGIAQVLAR-----------AGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFA 71 (255)
T ss_dssp TCEEEESSCS-SHHHHHHHHHHHH-----------TTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHH-----------CCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence 4567766765 5566655555432 14689999887631 1 2357788999999876555544
Q ss_pred hcC--CCCccEEeeCCCCC
Q 030299 114 HFD--GCKADLVVCDGAPD 130 (179)
Q Consensus 114 ~~~--~~~~D~VlsD~~~~ 130 (179)
... -+++|+|++..+..
T Consensus 72 ~~~~~~g~id~lv~~Ag~~ 90 (255)
T 2q2v_A 72 LAEREFGGVDILVNNAGIQ 90 (255)
T ss_dssp HHHHHHSSCSEEEECCCCC
T ss_pred HHHHHcCCCCEEEECCCCC
Confidence 221 13699999988643
No 500
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=76.05 E-value=3 Score=34.85 Aligned_cols=72 Identities=15% Similarity=0.076 Sum_probs=42.7
Q ss_pred CCCCCEEEEEccCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCeeEEeccccchhhHHHHHh
Q 030299 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIR 113 (179)
Q Consensus 39 l~~g~~VlDLgagp-Gg~s~~l~~~~~~~~~~~~~~~~~~~~~VvavD~~~~~~----~~~v~~i~gDi~~~~~~~~l~~ 113 (179)
+++|++||=.|||+ |..+..+++..+ ...|+++|.++.+. --|+..+ -|..+.+..+.+.+
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~i~~ 245 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAG-------------ATTVILSTRQATKRRLAEEVGATAT-VDPSAGDVVEAIAG 245 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEECSCHHHHHHHHHHTCSEE-ECTTSSCHHHHHHS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEECCCHHHHHHHHHcCCCEE-ECCCCcCHHHHHHh
Confidence 47899999999866 555566666654 23899999887321 0133211 23333333344443
Q ss_pred ---hcCCCCccEEee
Q 030299 114 ---HFDGCKADLVVC 125 (179)
Q Consensus 114 ---~~~~~~~D~Vls 125 (179)
..+ +++|+|+-
T Consensus 246 ~~~~~~-gg~Dvvid 259 (370)
T 4ej6_A 246 PVGLVP-GGVDVVIE 259 (370)
T ss_dssp TTSSST-TCEEEEEE
T ss_pred hhhccC-CCCCEEEE
Confidence 233 37999885
Done!