Query 030300
Match_columns 179
No_of_seqs 151 out of 444
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 18:50:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030300.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030300hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wff_A Riken cDNA 2810002D23 p 100.0 2.1E-30 7.2E-35 190.3 0.2 62 113-174 21-83 (85)
2 1wfh_A Zinc finger (AN1-like) 99.9 1.8E-27 6.2E-32 166.5 0.8 54 112-165 10-63 (64)
3 1wg2_A Zinc finger (AN1-like) 99.9 7.3E-27 2.5E-31 163.5 1.3 53 112-164 10-62 (64)
4 1wfl_A Zinc finger protein 216 99.9 8.5E-26 2.9E-30 161.9 4.4 52 112-163 20-71 (74)
5 1wfp_A Zinc finger (AN1-like) 99.9 7.9E-26 2.7E-30 162.1 1.3 54 111-164 19-72 (74)
6 1x4w_A Hypothetical protein FL 99.9 6.7E-26 2.3E-30 159.9 -0.6 54 111-164 9-65 (67)
7 2kzy_A ZNF216-A20, zfand5 prot 99.8 4.3E-19 1.5E-23 123.3 5.2 45 7-55 2-46 (62)
8 2c7n_A Rabex-5, GEF 1, RAB gua 99.7 2.9E-18 1E-22 122.5 3.4 40 12-52 7-46 (74)
9 3oj3_I Tumor necrosis factor a 99.6 1.1E-15 3.6E-20 101.4 3.3 29 22-50 18-47 (49)
10 1wfe_A Riken cDNA 2310008M20 p 99.3 1.7E-13 5.7E-18 100.5 0.9 59 113-179 21-82 (86)
11 1x4v_A Hypothetical protein LO 99.3 6E-13 2E-17 92.6 2.2 41 113-154 8-51 (63)
12 1wys_A Riken cDNA 2310008M20 p 99.2 2.4E-12 8.2E-17 92.3 2.3 41 116-157 13-56 (75)
13 2eqe_A Tumor necrosis factor, 97.8 1.5E-05 5.1E-10 52.2 3.0 30 21-50 14-44 (48)
14 1wfk_A Zinc finger, FYVE domai 93.7 0.044 1.5E-06 39.3 3.1 29 116-144 8-39 (88)
15 1vfy_A Phosphatidylinositol-3- 93.3 0.042 1.5E-06 37.8 2.3 27 118-144 12-41 (73)
16 2yw8_A RUN and FYVE domain-con 93.0 0.05 1.7E-06 38.2 2.3 28 117-144 19-49 (82)
17 1x4u_A Zinc finger, FYVE domai 92.8 0.072 2.5E-06 37.5 2.9 28 117-144 14-44 (84)
18 1z2q_A LM5-1; membrane protein 92.5 0.068 2.3E-06 37.7 2.4 29 116-144 20-51 (84)
19 1joc_A EEA1, early endosomal a 92.1 0.055 1.9E-06 41.0 1.7 28 117-144 69-99 (125)
20 1dvp_A HRS, hepatocyte growth 91.2 0.084 2.9E-06 42.9 2.0 28 117-144 161-191 (220)
21 3zyq_A Hepatocyte growth facto 90.8 0.13 4.6E-06 42.2 2.9 28 117-144 164-194 (226)
22 3t7l_A Zinc finger FYVE domain 90.8 0.094 3.2E-06 37.5 1.7 28 117-144 20-50 (90)
23 1y02_A CARP2, FYVE-ring finger 89.1 0.15 5.1E-06 38.8 1.7 41 117-157 19-65 (120)
24 2vrw_B P95VAV, VAV1, proto-onc 83.2 0.5 1.7E-05 40.8 2.1 42 115-157 355-400 (406)
25 2eqf_A Tumor necrosis factor, 80.8 0.83 2.8E-05 29.3 1.9 25 24-48 12-36 (46)
26 3mpx_A FYVE, rhogef and PH dom 80.6 0.33 1.1E-05 42.1 0.0 28 117-144 375-405 (434)
27 4b6d_A RAC GTPase-activating p 79.6 0.62 2.1E-05 31.2 1.1 24 116-139 18-44 (61)
28 3c5k_A HD6, histone deacetylas 74.9 1.3 4.5E-05 32.8 1.9 30 117-150 24-54 (109)
29 2eqg_A Tumor necrosis factor, 67.9 3.2 0.00011 26.9 2.2 23 27-49 17-39 (49)
30 2enz_A NPKC-theta, protein kin 64.2 8.1 0.00028 25.3 3.8 25 116-140 22-50 (65)
31 2gmg_A Hypothetical protein PF 63.6 3.1 0.00011 31.1 1.8 26 126-153 62-88 (105)
32 1ptq_A Protein kinase C delta 63.1 4.1 0.00014 25.1 2.0 24 116-139 10-37 (50)
33 1wd2_A Ariadne-1 protein homol 61.9 4 0.00014 27.0 1.9 30 116-145 5-41 (60)
34 1kbe_A Kinase suppressor of RA 58.8 3.3 0.00011 26.6 1.0 22 118-140 15-37 (49)
35 2yuu_A NPKC-delta, protein kin 57.9 5.3 0.00018 27.6 2.1 26 115-140 26-55 (83)
36 1r79_A Diacylglycerol kinase, 56.3 6.3 0.00021 28.0 2.3 23 117-139 38-65 (84)
37 3ky9_A Proto-oncogene VAV; cal 56.2 5 0.00017 36.5 2.2 40 115-155 527-570 (587)
38 1ef4_A Subunit N, DNA-directed 55.1 3.7 0.00013 27.4 0.8 14 116-129 2-15 (55)
39 3h0g_L DNA-directed RNA polyme 53.2 6.2 0.00021 26.9 1.7 26 115-140 19-48 (63)
40 3uej_A NPKC-delta, protein kin 53.1 7.2 0.00025 25.5 2.0 24 116-139 19-46 (65)
41 2fnf_X Putative RAS effector N 52.8 6.9 0.00023 26.6 1.9 26 114-139 32-58 (72)
42 1twf_J DNA-directed RNA polyme 52.0 4.8 0.00016 28.1 1.0 14 116-129 3-16 (70)
43 1z60_A TFIIH basal transcripti 50.2 4.7 0.00016 27.0 0.7 35 119-153 17-56 (59)
44 2co8_A NEDD9 interacting prote 48.8 12 0.00041 25.1 2.7 29 118-146 43-73 (82)
45 2ysj_A Tripartite motif-contai 48.7 17 0.00059 22.6 3.3 26 116-142 19-44 (63)
46 1faq_A RAF-1; transferase, ser 48.6 5.9 0.0002 24.6 1.0 24 116-140 13-37 (52)
47 1rfh_A RAS association (ralgds 47.6 6.2 0.00021 25.7 1.0 25 115-139 20-45 (59)
48 1y8f_A UNC-13 homolog A, MUNC1 46.0 11 0.00038 24.8 2.1 24 116-139 23-50 (66)
49 4ayb_N DNA-directed RNA polyme 45.6 6.1 0.00021 27.3 0.7 14 116-129 3-16 (66)
50 2lce_A B-cell lymphoma 6 prote 45.4 14 0.00049 23.1 2.5 27 116-142 16-57 (74)
51 2eli_A Protein kinase C alpha 45.3 19 0.00065 24.9 3.3 42 116-157 27-72 (85)
52 2ysl_A Tripartite motif-contai 44.5 19 0.00066 22.9 3.1 26 116-142 19-44 (73)
53 2enn_A NPKC-theta, protein kin 41.3 9.1 0.00031 26.1 1.1 26 115-140 32-61 (77)
54 2d8t_A Dactylidin, ring finger 41.1 19 0.00065 23.1 2.6 46 116-162 14-62 (71)
55 3f6q_B LIM and senescent cell 40.2 7.7 0.00026 24.7 0.6 27 118-144 40-66 (72)
56 1x68_A FHL5 protein; four-and- 39.2 15 0.00053 24.0 2.0 29 118-146 36-64 (76)
57 2ecv_A Tripartite motif-contai 39.0 34 0.0012 22.0 3.7 26 117-143 19-44 (85)
58 2db6_A SH3 and cysteine rich d 38.6 8.1 0.00028 26.1 0.5 25 116-140 27-55 (74)
59 3j21_g 50S ribosomal protein L 38.1 9.7 0.00033 24.9 0.8 24 116-139 13-37 (51)
60 2kwq_A Protein MCM10 homolog; 37.3 13 0.00043 27.1 1.4 20 131-150 48-67 (92)
61 2cot_A Zinc finger protein 435 37.2 36 0.0012 21.3 3.5 26 116-141 17-57 (77)
62 2d8x_A Protein pinch; LIM doma 34.8 10 0.00036 24.3 0.5 27 118-144 32-58 (70)
63 4gne_A Histone-lysine N-methyl 34.6 20 0.00067 26.4 2.1 27 118-147 59-86 (107)
64 2ct2_A Tripartite motif protei 33.4 36 0.0012 22.2 3.1 26 117-142 15-43 (88)
65 2ecj_A Tripartite motif-contai 33.0 36 0.0012 20.4 2.9 25 117-142 15-39 (58)
66 2elq_A Zinc finger protein 406 32.6 17 0.00059 19.2 1.2 12 130-141 8-20 (36)
67 4gzn_C ZFP-57, zinc finger pro 32.3 13 0.00046 23.7 0.7 27 116-142 3-44 (60)
68 1x64_A Alpha-actinin-2 associa 31.1 13 0.00044 25.2 0.5 10 118-127 26-35 (89)
69 2uzg_A Ubiquitin carboxyl-term 31.0 29 0.001 24.7 2.5 31 117-150 25-58 (97)
70 2yur_A Retinoblastoma-binding 30.8 38 0.0013 21.9 2.8 27 116-143 14-41 (74)
71 2ecw_A Tripartite motif-contai 30.5 55 0.0019 20.9 3.6 25 117-142 19-43 (85)
72 2ayj_A 50S ribosomal protein L 30.2 13 0.00045 24.8 0.4 23 116-138 18-41 (56)
73 1nyp_A Pinch protein; LIM doma 29.7 14 0.00049 23.3 0.5 27 118-144 32-58 (66)
74 2ea6_A Ring finger protein 4; 29.6 30 0.001 21.4 2.1 27 116-142 14-46 (69)
75 2ee8_A Protein ODD-skipped-rel 29.6 48 0.0016 21.8 3.3 27 116-142 16-57 (106)
76 1x61_A Thyroid receptor intera 29.5 15 0.00051 23.6 0.6 26 118-143 34-59 (72)
77 1x4l_A Skeletal muscle LIM-pro 29.4 15 0.00052 23.6 0.6 27 118-144 36-62 (72)
78 1g47_A Pinch protein; LIM doma 28.7 15 0.00051 23.8 0.5 25 119-143 41-65 (77)
79 2csy_A Zinc finger protein 183 28.4 42 0.0014 21.9 2.8 26 116-142 14-39 (81)
80 1bbo_A Human enhancer-binding 28.3 27 0.00091 20.3 1.6 11 131-141 29-40 (57)
81 2ehe_A Four and A half LIM dom 28.3 30 0.001 22.7 2.0 28 118-145 44-71 (82)
82 2zet_C Melanophilin; complex, 28.2 24 0.00081 27.5 1.6 30 116-145 67-100 (153)
83 1znf_A 31ST zinc finger from X 27.8 17 0.00058 17.6 0.5 10 132-141 2-12 (27)
84 3uk3_C Zinc finger protein 217 27.6 26 0.0009 20.4 1.5 11 117-127 4-14 (57)
85 1vd4_A Transcription initiatio 27.5 20 0.00067 22.1 0.9 26 116-141 13-50 (62)
86 1x4k_A Skeletal muscle LIM-pro 27.5 17 0.00058 23.2 0.6 27 118-144 34-60 (72)
87 2m0d_A Zinc finger and BTB dom 27.0 18 0.00062 17.7 0.5 10 132-141 4-14 (30)
88 2adr_A ADR1; transcription reg 26.9 29 0.00099 20.5 1.6 11 131-141 30-41 (60)
89 2lv2_A Insulinoma-associated p 26.6 35 0.0012 23.2 2.2 27 116-142 27-68 (85)
90 2kvf_A Zinc finger and BTB dom 26.5 19 0.00066 17.6 0.6 12 131-142 3-15 (28)
91 1x62_A C-terminal LIM domain p 26.4 11 0.00039 24.9 -0.5 24 119-142 43-66 (79)
92 2kvh_A Zinc finger and BTB dom 26.3 19 0.00065 17.6 0.5 10 132-141 4-14 (27)
93 1ard_A Yeast transcription fac 26.3 17 0.0006 17.7 0.4 10 132-141 3-13 (29)
94 2row_A RHO-associated protein 26.2 15 0.00053 26.0 0.2 42 115-156 33-83 (84)
95 1yop_A KTI11P; zinc finger, me 25.9 17 0.00057 25.9 0.3 14 129-142 21-34 (83)
96 2lvu_A Zinc finger and BTB dom 31.7 14 0.00049 17.9 0.0 12 132-143 3-15 (26)
97 1zbd_B Rabphilin-3A; G protein 25.7 32 0.0011 26.1 1.9 30 116-145 54-87 (134)
98 2m0f_A Zinc finger and BTB dom 25.6 19 0.00066 17.5 0.5 10 132-141 3-13 (29)
99 2elo_A Zinc finger protein 406 25.1 24 0.00082 18.6 0.9 10 131-140 9-19 (37)
100 1e4u_A Transcriptional repress 25.1 23 0.00079 24.0 1.0 25 118-142 12-39 (78)
101 2cu8_A Cysteine-rich protein 2 25.1 28 0.00095 22.6 1.3 25 118-142 37-61 (76)
102 2jr7_A DPH3 homolog; DESR1, CS 25.0 18 0.00063 26.0 0.4 12 129-140 21-32 (89)
103 1wyh_A SLIM 2, skeletal muscle 24.9 20 0.00067 22.9 0.5 27 118-144 34-60 (72)
104 2kvg_A Zinc finger and BTB dom 24.7 19 0.00067 17.8 0.4 10 132-141 4-14 (27)
105 2elx_A Zinc finger protein 406 24.6 25 0.00087 18.1 0.9 11 131-141 7-18 (35)
106 2djb_A Polycomb group ring fin 24.5 48 0.0017 21.1 2.4 25 117-142 15-40 (72)
107 2dar_A PDZ and LIM domain prot 24.5 21 0.00073 24.1 0.7 11 117-127 25-35 (90)
108 1a7i_A QCRP2 (LIM1); LIM domai 24.5 19 0.00065 23.7 0.4 25 119-143 36-60 (81)
109 1jm7_B BARD1, BRCA1-associated 24.3 33 0.0011 24.3 1.7 26 117-143 22-48 (117)
110 1p7a_A BF3, BKLF, kruppel-like 24.3 26 0.0009 18.4 0.9 8 118-125 12-19 (37)
111 1paa_A Yeast transcription fac 24.0 21 0.00071 17.7 0.4 11 132-142 3-14 (30)
112 1x63_A Skeletal muscle LIM-pro 24.0 21 0.00073 23.4 0.6 27 118-144 44-70 (82)
113 2d8z_A Four and A half LIM dom 24.0 21 0.00074 22.6 0.6 26 118-143 32-57 (70)
114 2gqj_A Zinc finger protein KIA 24.0 23 0.00079 23.7 0.8 13 116-128 23-35 (98)
115 1twf_L ABC10-alpha, DNA-direct 23.9 21 0.00073 24.4 0.6 23 116-138 27-53 (70)
116 1klr_A Zinc finger Y-chromosom 23.8 19 0.00066 17.5 0.3 10 132-141 3-13 (30)
117 1x6e_A Zinc finger protein 24; 23.7 43 0.0015 20.7 2.0 12 116-127 13-24 (72)
118 1srk_A Zinc finger protein ZFP 23.6 27 0.00093 18.1 0.9 11 131-141 7-18 (35)
119 2m0e_A Zinc finger and BTB dom 23.4 21 0.0007 17.3 0.3 11 132-142 3-14 (29)
120 1x5w_A Zinc finger protein 64, 23.2 38 0.0013 20.7 1.7 12 116-127 8-19 (70)
121 2csz_A Synaptotagmin-like prot 23.1 34 0.0011 24.1 1.5 31 116-146 24-58 (76)
122 2ect_A Ring finger protein 126 22.7 74 0.0025 20.4 3.1 27 117-143 15-43 (78)
123 1e0f_I Haemadin, factor IIA; c 22.3 43 0.0015 21.9 1.7 30 128-157 13-42 (57)
124 2d8y_A Eplin protein; LIM doma 22.2 21 0.0007 24.2 0.2 24 119-142 44-67 (91)
125 2ecy_A TNF receptor-associated 22.1 50 0.0017 20.6 2.1 26 117-143 15-40 (66)
126 1wge_A Hypothetical protein 26 22.1 22 0.00076 25.2 0.4 12 129-140 28-39 (83)
127 1rik_A E6APC1 peptide; E6-bind 22.1 26 0.00087 17.1 0.5 11 132-142 3-14 (29)
128 2elp_A Zinc finger protein 406 22.1 35 0.0012 18.0 1.2 11 131-141 9-20 (37)
129 2ctd_A Zinc finger protein 512 22.0 30 0.001 23.5 1.1 11 117-127 34-44 (96)
130 2elt_A Zinc finger protein 406 22.0 35 0.0012 17.7 1.2 10 131-140 9-19 (36)
131 2yqq_A Zinc finger HIT domain- 21.9 59 0.002 21.4 2.4 24 117-143 12-36 (56)
132 2lvt_A Zinc finger and BTB dom 27.0 20 0.00067 17.7 0.0 12 132-143 3-15 (29)
133 1ffk_W Ribosomal protein L37AE 21.3 34 0.0012 23.8 1.2 30 114-143 24-58 (73)
134 3cc2_Z 50S ribosomal protein L 20.6 32 0.0011 26.0 1.0 31 114-144 57-92 (116)
135 3l11_A E3 ubiquitin-protein li 20.6 34 0.0012 23.9 1.1 25 117-142 15-39 (115)
136 2ecn_A Ring finger protein 141 20.5 81 0.0028 19.7 2.9 24 117-142 15-38 (70)
137 2elv_A Zinc finger protein 406 20.4 35 0.0012 17.9 0.9 11 131-141 9-20 (36)
138 2elm_A Zinc finger protein 406 20.1 37 0.0013 18.1 1.0 11 131-141 9-20 (37)
No 1
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=99.95 E-value=2.1e-30 Score=190.27 Aligned_cols=62 Identities=44% Similarity=0.947 Sum_probs=59.0
Q ss_pred CCCCCCCccccccccccc-ceeeecCCccccCCCCCCCCCCcccchHHHHHHHHHhCCccccc
Q 030300 113 PKEGPSRCSSCKKRVGLT-GFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAE 174 (179)
Q Consensus 113 ~~~~~~rC~~C~kkvgl~-gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l~k~Np~v~~~ 174 (179)
+++.++||+.|+|||||+ +|+||||++||+.|||||+|+|+||||++||++|+|+||+|+++
T Consensus 21 ~k~~~~rC~~C~kkvgl~~~f~CrCg~~FC~~HRy~e~H~C~fDyK~~gr~~iak~NPvV~a~ 83 (85)
T 1wff_A 21 KKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGPS 83 (85)
T ss_dssp CCCCCCBCSSSCCBCSSSSCEECTTCCEECTTTCSTGGGTCCSCCSSSCCCCCCCCCCCCCTT
T ss_pred CcccCccchhhCCeecccCCeEcCCCCEecccCCCccCCCCcchhhHHHHHHHHHHCCeecCC
Confidence 456789999999999996 99999999999999999999999999999999999999999986
No 2
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=99.93 E-value=1.8e-27 Score=166.49 Aligned_cols=54 Identities=50% Similarity=1.179 Sum_probs=50.6
Q ss_pred CCCCCCCCcccccccccccceeeecCCccccCCCCCCCCCCcccchHHHHHHHH
Q 030300 112 KPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAII 165 (179)
Q Consensus 112 ~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l~ 165 (179)
+++..++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|+
T Consensus 10 ~~k~~~~rC~~C~kkvgl~~f~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~ 63 (64)
T 1wfh_A 10 SPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPSS 63 (64)
T ss_dssp CCCSSCCCCTTTCCCCCTTCEECSSSCEECTTTCSTTTTTCCCCCSCCCCSCCC
T ss_pred CCCCcCCcChhhCCccCccCEEeecCCEeccccCCcccCCCCchhhHHHHHHhc
Confidence 446678999999999999999999999999999999999999999999999875
No 3
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=99.92 E-value=7.3e-27 Score=163.46 Aligned_cols=53 Identities=45% Similarity=1.122 Sum_probs=49.5
Q ss_pred CCCCCCCCcccccccccccceeeecCCccccCCCCCCCCCCcccchHHHHHHH
Q 030300 112 KPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAI 164 (179)
Q Consensus 112 ~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l 164 (179)
+++..++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|
T Consensus 10 ~~~~~~~rC~~C~kkvgl~~f~CrCg~~FC~~HR~~e~H~C~fDyk~~gr~~~ 62 (64)
T 1wg2_A 10 RPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGSGPS 62 (64)
T ss_dssp CCSCCSCSCTTTCCCCTTSCEECTTSCEECSSSCSSTTTTCCCCCSCSCCCSC
T ss_pred CCCCcCCcChhhCCcccccCeEeecCCEecccCCCccccCCCcchhHHhHHHh
Confidence 34456899999999999999999999999999999999999999999999876
No 4
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=99.92 E-value=8.5e-26 Score=161.95 Aligned_cols=52 Identities=62% Similarity=1.308 Sum_probs=48.1
Q ss_pred CCCCCCCCcccccccccccceeeecCCccccCCCCCCCCCCcccchHHHHHH
Q 030300 112 KPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDA 163 (179)
Q Consensus 112 ~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~ 163 (179)
+.++.+|||+.|+|||||++|.||||++||+.|||+|+|+|+||||++||++
T Consensus 20 ~~k~~~nRC~~CrKkvgL~gf~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~ 71 (74)
T 1wfl_A 20 LPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEASGP 71 (74)
T ss_dssp CCCSCTTBCSSSCCBCGGGCEECTTSCEECSSSCSTTTTTCCCCGGGTSSCC
T ss_pred cCCCcCCcChhhCCcccccCeecCCCCEechhcCCCccCCCcchhhhhchhh
Confidence 3455689999999999999999999999999999999999999999999864
No 5
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=99.91 E-value=7.9e-26 Score=162.10 Aligned_cols=54 Identities=48% Similarity=1.136 Sum_probs=50.1
Q ss_pred CCCCCCCCCcccccccccccceeeecCCccccCCCCCCCCCCcccchHHHHHHH
Q 030300 111 AKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAI 164 (179)
Q Consensus 111 ~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l 164 (179)
.++++.++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|
T Consensus 19 ~~~k~~~~RC~~C~kkvgL~~f~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~~ 72 (74)
T 1wfp_A 19 DPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVASGPS 72 (74)
T ss_dssp CCTTCCCCBCSSSCCBCTTTCEECTTSCEECTTTCSTTTSCCCSCTTSCCCCCC
T ss_pred ccCcccCccchhhcCcccccceEeccCCEeccccCCCcCCCCcCchhHHhHHhh
Confidence 344667899999999999999999999999999999999999999999999876
No 6
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.90 E-value=6.7e-26 Score=159.86 Aligned_cols=54 Identities=28% Similarity=0.741 Sum_probs=49.3
Q ss_pred CCCCCCCCCcccccccccccc---eeeecCCccccCCCCCCCCCCcccchHHHHHHH
Q 030300 111 AKPKEGPSRCSSCKKRVGLTG---FKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAI 164 (179)
Q Consensus 111 ~~~~~~~~rC~~C~kkvgl~g---f~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l 164 (179)
.++++.++||+.|+|||||++ |+||||++||+.|||||+|+|+||||++||+.|
T Consensus 9 ~~~~~~~~rC~~C~kk~gL~~~egf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~~ 65 (67)
T 1x4w_A 9 RSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGSGPS 65 (67)
T ss_dssp CCSCSCTTBCSSSCCBCCHHHHHHHCCSSSCCCCTTTCSTGGGTCSSCSSCSSCCCC
T ss_pred ccCCccCCcchhhCCeecccccCceEecCCCEehhccCCccccCCcccccccccccc
Confidence 345667899999999999995 999999999999999999999999999999764
No 7
>2kzy_A ZNF216-A20, zfand5 protein (zinc finger protein 216 (predicte isoform CRA_A); A20 domain, atrogene, metal binding Pro; NMR {Rattus norvegicus} PDB: 2l00_A
Probab=99.76 E-value=4.3e-19 Score=123.30 Aligned_cols=45 Identities=38% Similarity=0.922 Sum_probs=37.5
Q ss_pred CCCCcccCCCCCCCCCcccccCCCCCCccccccchhhhhHHHHHHHhhh
Q 030300 7 NMDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQA 55 (179)
Q Consensus 7 ~M~~e~~~~q~~pe~p~LC~n~CGFfGs~at~n~CSkCyr~~~~~~~~~ 55 (179)
.|+++.. + |++|+||+|||||||||+|+||||||||+++.+++++
T Consensus 2 ~M~~e~~---~-~~~~~lC~ngCGFfGnpaT~nlCSkCyr~~~~~~~~~ 46 (62)
T 2kzy_A 2 SMAQETN---Q-TPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS 46 (62)
T ss_dssp CCCCCCC---C-CSCCCBCTTCCSSBCCTTTTSCCHHHHHHHHHHHHHH
T ss_pred chhhccc---C-CCcccchhhCCCCcCChhhcCcCHHHHHHHHHhhhcc
Confidence 4886522 3 6789999999999999999999999999998766544
No 8
>2c7n_A Rabex-5, GEF 1, RAB guanine nucleotide exchange factor 1; protein-binding, ubiquitin binding domain, endocytosis, NUCL protein, polyprotein; 2.1A {Homo sapiens} SCOP: g.39.1.15 PDB: 2c7m_A 2fif_B 2fid_B
Probab=99.71 E-value=2.9e-18 Score=122.50 Aligned_cols=40 Identities=30% Similarity=0.792 Sum_probs=26.9
Q ss_pred ccCCCCCCCCCcccccCCCCCCccccccchhhhhHHHHHHH
Q 030300 12 ETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQ 52 (179)
Q Consensus 12 ~~~~q~~pe~p~LC~n~CGFfGs~at~n~CSkCyr~~~~~~ 52 (179)
.++++. |++|+||+|||||||||+|+||||||||+++.+.
T Consensus 7 ~~~~q~-pe~~~lC~ngCGFfGnpaT~nlCSkCyrd~~~k~ 46 (74)
T 2c7n_A 7 RRGIHV-DQSDLLCKKGCGYYGNPAWQGFCSKCWREEYHKA 46 (74)
T ss_dssp ------------CCTTCSSSCCCGGGTTCCHHHHHHHHHHH
T ss_pred hccCCC-CCcchhHHhCCCCCCChhhcCccHHHHHHHHHHH
Confidence 466777 8899999999999999999999999999986543
No 9
>3oj3_I Tumor necrosis factor alpha-induced protein 3; ubiquitin, zinc finger, zinc ION, protein binding-hydrolase; 2.50A {Homo sapiens} PDB: 3oj4_C
Probab=99.57 E-value=1.1e-15 Score=101.38 Aligned_cols=29 Identities=21% Similarity=0.644 Sum_probs=27.0
Q ss_pred Ccccc-cCCCCCCccccccchhhhhHHHHH
Q 030300 22 PILCI-NNCGFFGSVATMNMCSKCYKDIML 50 (179)
Q Consensus 22 p~LC~-n~CGFfGs~at~n~CSkCyr~~~~ 50 (179)
..||+ |||||||||+|+|||||||||++.
T Consensus 18 q~lC~~ngCGFfG~p~t~n~CSkCyre~~e 47 (49)
T 3oj3_I 18 TSKCRKAGCVYFGTPENKGFCTLCFIEYRE 47 (49)
T ss_dssp CCBCSSTTCSSBCBGGGTTBCHHHHHHHHH
T ss_pred ccccccCCCCCccCcccCCcchHHHHHHHH
Confidence 36999 999999999999999999999875
No 10
>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=99.33 E-value=1.7e-13 Score=100.50 Aligned_cols=59 Identities=20% Similarity=0.446 Sum_probs=50.0
Q ss_pred CCCCCCCccc--ccccccccceeee-cCCccccCCCCCCCCCCcccchHHHHHHHHHhCCcccccccccC
Q 030300 113 PKEGPSRCSS--CKKRVGLTGFKCR-CGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 179 (179)
Q Consensus 113 ~~~~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~~~r~~l~k~Np~v~~~Ki~KI 179 (179)
.+..++||.. |+++ +|++|.|+ |+.+||..|||++.|+|+.. .+.+.++...+.++.+|
T Consensus 21 ~~~~~~~C~~~~Ck~~-~~l~f~C~~C~~~FC~~HR~~e~H~C~~~-------~~~k~~~~~~~~l~~~~ 82 (86)
T 1wfe_A 21 DEHKSYSCSFKGCTDV-ELVAVICPYCEKNFCLRHRHQSDHDCEKL-------EVAKPRMAATQKLVRSG 82 (86)
T ss_dssp SCSCCEECCSTTCCCE-ESSCEECTTTCCEECGGGCSTGGGTCSSS-------SCCCSSCCCCCCCSSCS
T ss_pred cCCCCCCCCCcCCCCC-CccceECCCCCcccccccCCccCCCCCCC-------cccccchHHHHHHHHHH
Confidence 3456799999 9998 88999999 99999999999999999984 34677788877777765
No 11
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=6e-13 Score=92.64 Aligned_cols=41 Identities=27% Similarity=0.761 Sum_probs=37.4
Q ss_pred CCCCCCCccc--ccccccccceeee-cCCccccCCCCCCCCCCcc
Q 030300 113 PKEGPSRCSS--CKKRVGLTGFKCR-CGNLYCVSHRYSDKHNCPF 154 (179)
Q Consensus 113 ~~~~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~f 154 (179)
.+...+||.. |+++ +|++|.|+ |+.+||..|||+|.|+|+-
T Consensus 8 ~k~~~~~Cs~~~Ck~~-~ll~f~C~~C~~~FC~~HR~~e~H~C~~ 51 (63)
T 1x4v_A 8 RKIFTNKCERAGCRQR-EMMKLTCERCSRNFCIKHRHPLDHDCSG 51 (63)
T ss_dssp CCTTCCCCCSTTCCCC-CSSCCBCSSSCCBCCHHHHSTTSSCCCS
T ss_pred CcccCCCCCccCCCCC-CccceECCCCCcccCcccCCccCCcCCC
Confidence 4456899999 9998 99999999 9999999999999999973
No 12
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=99.23 E-value=2.4e-12 Score=92.33 Aligned_cols=41 Identities=29% Similarity=0.788 Sum_probs=38.6
Q ss_pred CCCCccc--ccccccccceeee-cCCccccCCCCCCCCCCcccch
Q 030300 116 GPSRCSS--CKKRVGLTGFKCR-CGNLYCVSHRYSDKHNCPFDYR 157 (179)
Q Consensus 116 ~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk 157 (179)
..+||.. |+++ +|++|+|+ |+.+||..|||++.|+|+++++
T Consensus 13 ~g~~Cs~~~C~~~-dflpf~C~~C~~~FC~~HR~~e~H~C~~~~~ 56 (75)
T 1wys_A 13 IGQHCQVQHCRQR-DFLPFVCDGCSGIFCLEHRSKDSHGCSEVNV 56 (75)
T ss_dssp CCCCCSCTTTCCC-SCCCEECTTTCCEECSTTCSSGGGTCCCCSS
T ss_pred cCCCcCcccCCCc-cceeeECcccCcCcCcccCCccccCCCCCcc
Confidence 4689998 9987 99999999 9999999999999999999986
No 13
>2eqe_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}
Probab=97.77 E-value=1.5e-05 Score=52.21 Aligned_cols=30 Identities=23% Similarity=0.681 Sum_probs=26.5
Q ss_pred CCcccc-cCCCCCCccccccchhhhhHHHHH
Q 030300 21 GPILCI-NNCGFFGSVATMNMCSKCYKDIML 50 (179)
Q Consensus 21 ~p~LC~-n~CGFfGs~at~n~CSkCyr~~~~ 50 (179)
+...|. .||-|||+|.+.++|..||.++..
T Consensus 14 gt~kCRk~GC~fFGTpen~GFCTlCf~eyre 44 (48)
T 2eqe_A 14 GTSKCRKAGCVYFGTPENKGFCTLCFIEYSG 44 (48)
T ss_dssp CSSBCSSTTCCSBCCTTTTTCCHHHHHHHHS
T ss_pred ccchhhhcCCCcccCcccCceeeeehhhhhc
Confidence 346896 899999999999999999999853
No 14
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=93.69 E-value=0.044 Score=39.30 Aligned_cols=29 Identities=31% Similarity=0.846 Sum_probs=25.0
Q ss_pred CCCCcccccccccccc--eeee-cCCccccCC
Q 030300 116 GPSRCSSCKKRVGLTG--FKCR-CGNLYCVSH 144 (179)
Q Consensus 116 ~~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H 144 (179)
....|..|.++.+++. ..|| ||.+||+.+
T Consensus 8 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C 39 (88)
T 1wfk_A 8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGC 39 (88)
T ss_dssp CCSBCTTTCCBCCSSSCEEECSSSCCEEETTT
T ss_pred cCCCCcCcCCcccCccccccCCCCCCEEChhH
Confidence 3468999999999974 8999 999999874
No 15
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=93.27 E-value=0.042 Score=37.81 Aligned_cols=27 Identities=37% Similarity=1.062 Sum_probs=24.1
Q ss_pred CCccccccccccc--ceeee-cCCccccCC
Q 030300 118 SRCSSCKKRVGLT--GFKCR-CGNLYCVSH 144 (179)
Q Consensus 118 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 144 (179)
..|..|+++.+++ -..|| ||.+||+.+
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~C 41 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCGGVFCQEH 41 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGGG
T ss_pred CcccCCCCccCCccccccCCCCCEEEcccc
Confidence 4799999999997 49999 999999875
No 16
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=92.97 E-value=0.05 Score=38.23 Aligned_cols=28 Identities=29% Similarity=1.038 Sum_probs=24.3
Q ss_pred CCCccccccccccc--ceeee-cCCccccCC
Q 030300 117 PSRCSSCKKRVGLT--GFKCR-CGNLYCVSH 144 (179)
Q Consensus 117 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 144 (179)
...|..|.++.+|+ -..|| ||.+||+.+
T Consensus 19 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C 49 (82)
T 2yw8_A 19 ATHCRQCEKEFSISRRKHHCRNCGHIFCNTC 49 (82)
T ss_dssp CCBCTTTCCBCBTTBCCEECTTTCCEECSGG
T ss_pred CCcccCcCCcccCccccccCCCCCCEEChHH
Confidence 45799999999987 48999 999999864
No 17
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.77 E-value=0.072 Score=37.51 Aligned_cols=28 Identities=25% Similarity=0.755 Sum_probs=24.6
Q ss_pred CCCccccccccccc--ceeee-cCCccccCC
Q 030300 117 PSRCSSCKKRVGLT--GFKCR-CGNLYCVSH 144 (179)
Q Consensus 117 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 144 (179)
...|..|.++.+|+ --.|| ||.+||+..
T Consensus 14 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C 44 (84)
T 1x4u_A 14 FGNCTGCSATFSVLKKRRSCSNCGNSFCSRC 44 (84)
T ss_dssp CSSCSSSCCCCCSSSCCEECSSSCCEECTTT
T ss_pred CCcCcCcCCccccchhhhhhcCCCcEEChhh
Confidence 46899999999987 48999 999999875
No 18
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=92.45 E-value=0.068 Score=37.72 Aligned_cols=29 Identities=28% Similarity=0.694 Sum_probs=24.9
Q ss_pred CCCCccccccccccc--ceeee-cCCccccCC
Q 030300 116 GPSRCSSCKKRVGLT--GFKCR-CGNLYCVSH 144 (179)
Q Consensus 116 ~~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 144 (179)
....|..|+++.+++ -..|| ||.+||+.+
T Consensus 20 ~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C 51 (84)
T 1z2q_A 20 DAPACNGCGCVFTTTVRRHHCRNCGYVLCGDC 51 (84)
T ss_dssp TCCBCTTTCCBCCTTSCCEECTTTCCEECTGG
T ss_pred CCCCCcCcCCccccchhcccccCCCcEEChHH
Confidence 356899999999997 48999 999999864
No 19
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=92.10 E-value=0.055 Score=41.05 Aligned_cols=28 Identities=36% Similarity=0.991 Sum_probs=24.3
Q ss_pred CCCccccccccccc--ceeee-cCCccccCC
Q 030300 117 PSRCSSCKKRVGLT--GFKCR-CGNLYCVSH 144 (179)
Q Consensus 117 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 144 (179)
...|..|+++.+++ -..|| ||.+||+.+
T Consensus 69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~C 99 (125)
T 1joc_A 69 VQNCMACGKGFSVTVRRHHCRQCGNIFCAEC 99 (125)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred CCCCcCcCCccccccccccCCCCCeEEChHH
Confidence 46899999999987 48999 999999864
No 20
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=91.21 E-value=0.084 Score=42.90 Aligned_cols=28 Identities=29% Similarity=0.858 Sum_probs=24.6
Q ss_pred CCCccccccccccc--ceeee-cCCccccCC
Q 030300 117 PSRCSSCKKRVGLT--GFKCR-CGNLYCVSH 144 (179)
Q Consensus 117 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 144 (179)
...|..|+++.+++ -..|| ||.+||+.+
T Consensus 161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~C 191 (220)
T 1dvp_A 161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQC 191 (220)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTCCEECSTT
T ss_pred CCccCCCCCccCCcccccccCCcCCEEChHH
Confidence 36899999999987 49999 999999864
No 21
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=90.80 E-value=0.13 Score=42.16 Aligned_cols=28 Identities=29% Similarity=0.990 Sum_probs=24.6
Q ss_pred CCCccccccccccc--ceeee-cCCccccCC
Q 030300 117 PSRCSSCKKRVGLT--GFKCR-CGNLYCVSH 144 (179)
Q Consensus 117 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 144 (179)
...|..|+++.+++ -..|| ||.+||+.+
T Consensus 164 ~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~C 194 (226)
T 3zyq_A 164 AEECHRCRVQFGVMTRKHHCRACGQIFCGKC 194 (226)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECTTT
T ss_pred CCCCcCcCCCCCccccccccCCCcCEeChhh
Confidence 46899999999987 59999 999999864
No 22
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=90.78 E-value=0.094 Score=37.53 Aligned_cols=28 Identities=29% Similarity=0.915 Sum_probs=24.2
Q ss_pred CCCccccccccccc--ceeee-cCCccccCC
Q 030300 117 PSRCSSCKKRVGLT--GFKCR-CGNLYCVSH 144 (179)
Q Consensus 117 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 144 (179)
...|..|.++.+|+ -..|| ||.+||+..
T Consensus 20 ~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~C 50 (90)
T 3t7l_A 20 APNCMNCQVKFTFTKRRHHCRACGKVFCGVC 50 (90)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred CCcCcCCCCcccchhhCccccCCCCEECCcc
Confidence 46799999999997 59999 999999763
No 23
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=89.08 E-value=0.15 Score=38.84 Aligned_cols=41 Identities=22% Similarity=0.505 Sum_probs=28.8
Q ss_pred CCCccccccccccc--ceeee-cCCccccC---CCCCCCCCCcccch
Q 030300 117 PSRCSSCKKRVGLT--GFKCR-CGNLYCVS---HRYSDKHNCPFDYR 157 (179)
Q Consensus 117 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~---HRy~e~H~C~fDyk 157 (179)
...|..|+++.+++ --.|| ||.+||+. |+.+..--|..=|.
T Consensus 19 ~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~~ 65 (120)
T 1y02_A 19 EPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQR 65 (120)
T ss_dssp -CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHH
T ss_pred cCcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHHHH
Confidence 36899999999987 48999 99999875 46665566665554
No 24
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=83.24 E-value=0.5 Score=40.82 Aligned_cols=42 Identities=19% Similarity=0.403 Sum_probs=27.9
Q ss_pred CCCCCcccccccc-ccc--ceeee-cCCccccCCCCCCCCCCcccch
Q 030300 115 EGPSRCSSCKKRV-GLT--GFKCR-CGNLYCVSHRYSDKHNCPFDYR 157 (179)
Q Consensus 115 ~~~~rC~~C~kkv-gl~--gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk 157 (179)
..+..|..|++.+ |+. |++|| ||.++|..-.-.=. .|.-+.-
T Consensus 355 ~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~-~C~~~~~ 400 (406)
T 2vrw_B 355 EETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVP-PCGRHGQ 400 (406)
T ss_dssp SSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSC-CC-----
T ss_pred CCCCCCccccchhceeCCCCCCCCCCcCccchhhhhhCC-CCCCCch
Confidence 4578999999988 774 89999 99999976432112 3876644
No 25
>2eqf_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}
Probab=80.78 E-value=0.83 Score=29.31 Aligned_cols=25 Identities=20% Similarity=0.568 Sum_probs=21.8
Q ss_pred ccccCCCCCCccccccchhhhhHHH
Q 030300 24 LCINNCGFFGSVATMNMCSKCYKDI 48 (179)
Q Consensus 24 LC~n~CGFfGs~at~n~CSkCyr~~ 48 (179)
-++-+|..|||..-+++|..||.-.
T Consensus 12 C~apgCdhygN~kc~GyCNeC~~fK 36 (46)
T 2eqf_A 12 CRAPACDHFGNAKCNGYCNECFQFK 36 (46)
T ss_dssp CSSTTCCSCCBGGGTBSCHHHHHHH
T ss_pred ccCcccccccchhhhhhhHHHHhhH
Confidence 3478999999999999999999643
No 26
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=80.58 E-value=0.33 Score=42.09 Aligned_cols=28 Identities=29% Similarity=0.735 Sum_probs=0.0
Q ss_pred CCCccccccccccc--ceeee-cCCccccCC
Q 030300 117 PSRCSSCKKRVGLT--GFKCR-CGNLYCVSH 144 (179)
Q Consensus 117 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 144 (179)
...|..|+++.+++ ...|| ||.+||+.+
T Consensus 375 ~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~C 405 (434)
T 3mpx_A 375 VMMCMNCGCDFSLTLRRHHCHACGKIVCRNC 405 (434)
T ss_dssp -------------------------------
T ss_pred CCcCCCcCCCCCCcchhhhcccCcCEeehhh
Confidence 56899999999986 59999 999998653
No 27
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=79.61 E-value=0.62 Score=31.21 Aligned_cols=24 Identities=38% Similarity=0.976 Sum_probs=19.5
Q ss_pred CCCCcccccccccc--cceeee-cCCc
Q 030300 116 GPSRCSSCKKRVGL--TGFKCR-CGNL 139 (179)
Q Consensus 116 ~~~rC~~C~kkvgl--~gf~Cr-Cg~~ 139 (179)
.+..|..|++++++ .+++|| |+.+
T Consensus 18 ~~~~C~~Cg~~i~~gkq~~kC~dC~~~ 44 (61)
T 4b6d_A 18 KPESCVPCGKRIKFGKLSLKCRDCRVV 44 (61)
T ss_dssp SCEECTTTCCEECTTCEEEEESSSSCE
T ss_pred CCcccccccCEEEEeeEeeECCCCCCe
Confidence 46789999999987 589999 8643
No 28
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=74.87 E-value=1.3 Score=32.83 Aligned_cols=30 Identities=30% Similarity=0.773 Sum_probs=23.5
Q ss_pred CCCcccccccccccceeee-cCCccccCCCCCCCC
Q 030300 117 PSRCSSCKKRVGLTGFKCR-CGNLYCVSHRYSDKH 150 (179)
Q Consensus 117 ~~rC~~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H 150 (179)
..+|..|...-++ +.|- ||+++|+ ||+..|
T Consensus 24 ~~~C~~C~~~~~~--W~CL~CG~vgCg--r~~~~H 54 (109)
T 3c5k_A 24 TQPCGDCGTIQEN--WVCLSCYQVYCG--RYINGH 54 (109)
T ss_dssp TCCCTTTCCCSSE--EEETTTCCEEEC--TTTTCH
T ss_pred CCcCccccCCCCe--eeeeecCccccC--CCcChH
Confidence 4689999987665 6688 9999998 565555
No 29
>2eqg_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}
Probab=67.89 E-value=3.2 Score=26.90 Aligned_cols=23 Identities=39% Similarity=0.748 Sum_probs=20.5
Q ss_pred cCCCCCCccccccchhhhhHHHH
Q 030300 27 NNCGFFGSVATMNMCSKCYKDIM 49 (179)
Q Consensus 27 n~CGFfGs~at~n~CSkCyr~~~ 49 (179)
-+|-||=|-.|+-+|-.||...+
T Consensus 17 PnCpF~mSVnTQP~CHEC~errq 39 (49)
T 2eqg_A 17 PNCPFFMSVNTQPLCHECSERRQ 39 (49)
T ss_dssp TTCCSBCCTTTTTSCHHHHHHHH
T ss_pred CCCCeEEEecCccchHHHHHHHh
Confidence 48999999999999999998554
No 30
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=64.22 E-value=8.1 Score=25.33 Aligned_cols=25 Identities=40% Similarity=0.976 Sum_probs=19.6
Q ss_pred CCCCcccccccc-cc--cceeee-cCCcc
Q 030300 116 GPSRCSSCKKRV-GL--TGFKCR-CGNLY 140 (179)
Q Consensus 116 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~F 140 (179)
.+..|..|++.| || .|++|+ |+.+.
T Consensus 22 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~ 50 (65)
T 2enz_A 22 SPTFCEHCGTLLWGLARQGLKCDACGMNV 50 (65)
T ss_dssp SCCBCSSSCCBCCCSSSCSEEESSSCCEE
T ss_pred CCcCchhcChhheecCCcccccCCCCCcc
Confidence 568899999987 44 489999 87664
No 31
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=63.64 E-value=3.1 Score=31.10 Aligned_cols=26 Identities=23% Similarity=0.625 Sum_probs=18.2
Q ss_pred cccccceeee-cCCccccCCCCCCCCCCc
Q 030300 126 RVGLTGFKCR-CGNLYCVSHRYSDKHNCP 153 (179)
Q Consensus 126 kvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~ 153 (179)
+|-+..++|+ ||++| .-+......|+
T Consensus 62 ~L~v~p~~C~~CG~~F--~~~~~kPsrCP 88 (105)
T 2gmg_A 62 VLLIKPAQCRKCGFVF--KAEINIPSRCP 88 (105)
T ss_dssp EEEECCCBBTTTCCBC--CCCSSCCSSCS
T ss_pred EEEEECcChhhCcCee--cccCCCCCCCc
Confidence 5666789999 99999 33455555565
No 32
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=63.08 E-value=4.1 Score=25.08 Aligned_cols=24 Identities=42% Similarity=1.046 Sum_probs=18.7
Q ss_pred CCCCcccccccc-cc--cceeee-cCCc
Q 030300 116 GPSRCSSCKKRV-GL--TGFKCR-CGNL 139 (179)
Q Consensus 116 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~ 139 (179)
.+..|..|++.| || .|++|+ |+.+
T Consensus 10 ~pt~C~~C~~~l~g~~~qg~~C~~C~~~ 37 (50)
T 1ptq_A 10 SPTFCDHCGSLLWGLVKQGLKCEDCGMN 37 (50)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCE
T ss_pred CCCCcCCCCceeeccCCccCEeCCCCCe
Confidence 567899999988 44 489998 7654
No 33
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=61.93 E-value=4 Score=27.04 Aligned_cols=30 Identities=23% Similarity=0.699 Sum_probs=24.8
Q ss_pred CCCCcccccccccccc----eeee---cCCccccCCC
Q 030300 116 GPSRCSSCKKRVGLTG----FKCR---CGNLYCVSHR 145 (179)
Q Consensus 116 ~~~rC~~C~kkvgl~g----f~Cr---Cg~~FC~~HR 145 (179)
...+|..|+..|.+.+ ..|+ |+..||..=.
T Consensus 5 ~~k~CP~C~~~Iek~~GCnhmtC~~~~C~~~FCw~C~ 41 (60)
T 1wd2_A 5 NTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCL 41 (60)
T ss_dssp CCCCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSC
T ss_pred cceECcCCCCeeEeCCCCCcEEECCCCcCCEEeeCcC
Confidence 4578999999998863 8998 9999998654
No 34
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=58.80 E-value=3.3 Score=26.59 Aligned_cols=22 Identities=32% Similarity=0.860 Sum_probs=17.8
Q ss_pred CCcccccccccccceeee-cCCcc
Q 030300 118 SRCSSCKKRVGLTGFKCR-CGNLY 140 (179)
Q Consensus 118 ~rC~~C~kkvgl~gf~Cr-Cg~~F 140 (179)
..|..|+|.| ..|++|+ |++.+
T Consensus 15 t~C~~C~k~i-~~G~kC~~Ck~~c 37 (49)
T 1kbe_A 15 QVCNVCQKSM-IFGVKCKHCRLKC 37 (49)
T ss_dssp CCCSSSCCSS-CCEEEETTTTEEE
T ss_pred cCccccCcee-ECcCCCCCCCCcc
Confidence 5699999988 4799999 77654
No 35
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.85 E-value=5.3 Score=27.56 Aligned_cols=26 Identities=50% Similarity=1.071 Sum_probs=20.4
Q ss_pred CCCCCcccccccc-cc--cceeee-cCCcc
Q 030300 115 EGPSRCSSCKKRV-GL--TGFKCR-CGNLY 140 (179)
Q Consensus 115 ~~~~rC~~C~kkv-gl--~gf~Cr-Cg~~F 140 (179)
..+..|..|++.| || .|++|+ |+.++
T Consensus 26 ~~pt~C~~C~~~lwGl~kqg~~C~~C~~~~ 55 (83)
T 2yuu_A 26 GQPTFCSVCKDFVWGLNKQGYKCRQCNAAI 55 (83)
T ss_dssp SSCCCCSSSCCCCCSSSCCEEEETTTCCEE
T ss_pred CCCcChhhcChhhccccccccccCCcCCee
Confidence 3578899999988 45 489999 87664
No 36
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=56.30 E-value=6.3 Score=27.98 Aligned_cols=23 Identities=26% Similarity=0.910 Sum_probs=18.3
Q ss_pred CCCcccccccc----cccceeee-cCCc
Q 030300 117 PSRCSSCKKRV----GLTGFKCR-CGNL 139 (179)
Q Consensus 117 ~~rC~~C~kkv----gl~gf~Cr-Cg~~ 139 (179)
..+|..|+|.+ +|.||+|. |+.+
T Consensus 38 ~s~C~vC~k~c~s~~~L~g~rC~WCq~~ 65 (84)
T 1r79_A 38 SAKCTVCDKTCGSVLRLQDWRCLWCKAM 65 (84)
T ss_dssp TCBCSSSCCBCCCTTTCCCEEESSSCCE
T ss_pred CCEeCCCCCEeCCccCCCCCCCcccChh
Confidence 46899999985 56899999 7654
No 37
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=56.22 E-value=5 Score=36.51 Aligned_cols=40 Identities=20% Similarity=0.462 Sum_probs=29.0
Q ss_pred CCCCCcccccccc-ccc--ceeee-cCCccccCCCCCCCCCCccc
Q 030300 115 EGPSRCSSCKKRV-GLT--GFKCR-CGNLYCVSHRYSDKHNCPFD 155 (179)
Q Consensus 115 ~~~~rC~~C~kkv-gl~--gf~Cr-Cg~~FC~~HRy~e~H~C~fD 155 (179)
..+..|..|++.+ ||. |++|+ ||.+.|....-.= ..|...
T Consensus 527 ~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~v-~~C~~~ 570 (587)
T 3ky9_A 527 EETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRV-PPCGRH 570 (587)
T ss_dssp SSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGGS-CCC---
T ss_pred CCCcccccccccccccccCCcCCCCCCCccchhhhhcC-CCCCCC
Confidence 4578999999987 775 99999 9999987754433 377654
No 38
>1ef4_A Subunit N, DNA-directed RNA polymerase; three helix bundle, zinc binding, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: a.4.11.1
Probab=55.12 E-value=3.7 Score=27.45 Aligned_cols=14 Identities=50% Similarity=0.802 Sum_probs=11.4
Q ss_pred CCCCcccccccccc
Q 030300 116 GPSRCSSCKKRVGL 129 (179)
Q Consensus 116 ~~~rC~~C~kkvgl 129 (179)
.|.||++|+|-+|-
T Consensus 2 iPVRCFTCGkvi~~ 15 (55)
T 1ef4_A 2 IPVRCLSCGKPVSA 15 (55)
T ss_dssp CSSSCSCTTSCCHH
T ss_pred CCeecCCCCCChhH
Confidence 36899999998764
No 39
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=53.21 E-value=6.2 Score=26.86 Aligned_cols=26 Identities=27% Similarity=0.636 Sum_probs=20.2
Q ss_pred CCCCCccccccccccc---ceeee-cCCcc
Q 030300 115 EGPSRCSSCKKRVGLT---GFKCR-CGNLY 140 (179)
Q Consensus 115 ~~~~rC~~C~kkvgl~---gf~Cr-Cg~~F 140 (179)
.-.-+|..|+..+.|. +.+|+ ||+-.
T Consensus 19 ~v~Y~C~~Cg~~~~l~~~~~iRC~~CG~RI 48 (63)
T 3h0g_L 19 TMIYLCADCGARNTIQAKEVIRCRECGHRV 48 (63)
T ss_dssp CCCCBCSSSCCBCCCCSSSCCCCSSSCCCC
T ss_pred CeEEECCCCCCeeecCCCCceECCCCCcEE
Confidence 3468999999999985 58997 76543
No 40
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=53.11 E-value=7.2 Score=25.52 Aligned_cols=24 Identities=42% Similarity=1.046 Sum_probs=18.7
Q ss_pred CCCCcccccccc-cc--cceeee-cCCc
Q 030300 116 GPSRCSSCKKRV-GL--TGFKCR-CGNL 139 (179)
Q Consensus 116 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~ 139 (179)
.+..|..|++.| || .|++|+ |+.+
T Consensus 19 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~ 46 (65)
T 3uej_A 19 SPTFCDHCGSLLWGLVKQGLKCEDCGMN 46 (65)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCE
T ss_pred CCCcccccChhhhccCceeeECCCCCCe
Confidence 467899999986 55 489998 7654
No 41
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=52.85 E-value=6.9 Score=26.62 Aligned_cols=26 Identities=27% Similarity=0.733 Sum_probs=21.1
Q ss_pred CCCCCCcccccccccccceeee-cCCc
Q 030300 114 KEGPSRCSSCKKRVGLTGFKCR-CGNL 139 (179)
Q Consensus 114 ~~~~~rC~~C~kkvgl~gf~Cr-Cg~~ 139 (179)
-..+..|..|++.|.-.|++|+ |+.+
T Consensus 32 ~~~pt~C~~C~~~l~~qG~kC~~C~~~ 58 (72)
T 2fnf_X 32 RGGPGWCDLCGREVLRQALRCANCKFT 58 (72)
T ss_dssp CSSCCBCTTTSSBCSSCCEECTTSSCE
T ss_pred CCCCcchhhhhHHHHhCcCccCCCCCe
Confidence 3467899999999955699999 8765
No 42
>1twf_J DNA-directed RNA polymerases I, II, and III 8.3 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: a.4.11.1 PDB: 1i3q_J 1i6h_J 1k83_J* 1nik_J 1nt9_J 1pqv_J 1r5u_J 1r9s_J* 1r9t_J* 1sfo_J* 1twa_J* 1twc_J* 1i50_J* 1twg_J* 1twh_J* 1wcm_J 1y1v_J 1y1w_J 1y1y_J 1y77_J* ...
Probab=52.05 E-value=4.8 Score=28.08 Aligned_cols=14 Identities=57% Similarity=0.869 Sum_probs=11.8
Q ss_pred CCCCcccccccccc
Q 030300 116 GPSRCSSCKKRVGL 129 (179)
Q Consensus 116 ~~~rC~~C~kkvgl 129 (179)
.|.||++|+|-+|-
T Consensus 3 iPVRCFTCGkvi~~ 16 (70)
T 1twf_J 3 VPVRCFSCGKVVGD 16 (70)
T ss_dssp CCSBCTTTCCBCTT
T ss_pred CCeecCCCCCChHH
Confidence 36899999998875
No 43
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=50.17 E-value=4.7 Score=27.05 Aligned_cols=35 Identities=29% Similarity=0.818 Sum_probs=24.5
Q ss_pred Ccccccccccccc-eeee-cCCccccC---CCCCCCCCCc
Q 030300 119 RCSSCKKRVGLTG-FKCR-CGNLYCVS---HRYSDKHNCP 153 (179)
Q Consensus 119 rC~~C~kkvgl~g-f~Cr-Cg~~FC~~---HRy~e~H~C~ 153 (179)
.|+.|.+++.-.+ |.|. |...||.. -=+-.-|+|.
T Consensus 17 ~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~CP 56 (59)
T 1z60_A 17 FCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCP 56 (59)
T ss_dssp EETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSS
T ss_pred cccccCcccCCCccEECCccCcCcccchhHHHHhhccCCc
Confidence 4999999985544 9998 99999852 1222356654
No 44
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=48.80 E-value=12 Score=25.14 Aligned_cols=29 Identities=28% Similarity=0.682 Sum_probs=18.2
Q ss_pred CCcccccccccccceee--ecCCccccCCCC
Q 030300 118 SRCSSCKKRVGLTGFKC--RCGNLYCVSHRY 146 (179)
Q Consensus 118 ~rC~~C~kkvgl~gf~C--rCg~~FC~~HRy 146 (179)
-+|..|++.|....|.. +=|.+||..|-.
T Consensus 43 F~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~ 73 (82)
T 2co8_A 43 FRCHTCEATLWPGGYEQHPGDGHFYCLQHLP 73 (82)
T ss_dssp CBCSSSCCBCCTTSEECCTTTCCCEETTTCC
T ss_pred CEEcCCCCCcCCCceeEeCcCCEEEChHHHH
Confidence 45666777666656553 456777776654
No 45
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.66 E-value=17 Score=22.63 Aligned_cols=26 Identities=19% Similarity=0.558 Sum_probs=18.5
Q ss_pred CCCCcccccccccccceeeecCCcccc
Q 030300 116 GPSRCSSCKKRVGLTGFKCRCGNLYCV 142 (179)
Q Consensus 116 ~~~rC~~C~kkvgl~gf~CrCg~~FC~ 142 (179)
....|..|...+.- ...-.||++||.
T Consensus 19 ~~~~C~IC~~~~~~-p~~~~CgH~fC~ 44 (63)
T 2ysj_A 19 EEVICPICLDILQK-PVTIDCGHNFCL 44 (63)
T ss_dssp CCCBCTTTCSBCSS-CEECTTSSEECH
T ss_pred cCCCCCcCCchhCC-eEEeCCCCcchH
Confidence 34679999865443 344589999996
No 46
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=48.57 E-value=5.9 Score=24.56 Aligned_cols=24 Identities=33% Similarity=0.897 Sum_probs=19.4
Q ss_pred CCCCcccccccccccceeee-cCCcc
Q 030300 116 GPSRCSSCKKRVGLTGFKCR-CGNLY 140 (179)
Q Consensus 116 ~~~rC~~C~kkvgl~gf~Cr-Cg~~F 140 (179)
.+..|..|++.|- .|++|+ |+...
T Consensus 13 ~pt~C~~C~~~l~-qG~~C~~C~~~~ 37 (52)
T 1faq_A 13 KLAFCDICQKFLL-NGFRCQTCGYKF 37 (52)
T ss_dssp SCEECTTSSSEEC-SEEECTTTTCCB
T ss_pred CCcCCCCcccccc-cCCEeCCCCCeE
Confidence 4678999999875 799999 87654
No 47
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=47.63 E-value=6.2 Score=25.68 Aligned_cols=25 Identities=28% Similarity=0.727 Sum_probs=20.1
Q ss_pred CCCCCcccccccccccceeee-cCCc
Q 030300 115 EGPSRCSSCKKRVGLTGFKCR-CGNL 139 (179)
Q Consensus 115 ~~~~rC~~C~kkvgl~gf~Cr-Cg~~ 139 (179)
..+..|..|++.|.-.|++|+ |+.+
T Consensus 20 ~~pt~C~~C~~~i~kqg~kC~~C~~~ 45 (59)
T 1rfh_A 20 GGPGWCDLCGREVLRQALRCANCKFT 45 (59)
T ss_dssp SCCEECTTTCSEECSCCEECTTTSCE
T ss_pred CCCeEchhcchhhhhCccEeCCCCCe
Confidence 457889999999954699999 7654
No 48
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=46.01 E-value=11 Score=24.79 Aligned_cols=24 Identities=33% Similarity=1.007 Sum_probs=18.8
Q ss_pred CCCCcccccccc-cc--cceeee-cCCc
Q 030300 116 GPSRCSSCKKRV-GL--TGFKCR-CGNL 139 (179)
Q Consensus 116 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~ 139 (179)
.+..|..|++.| || .|++|+ |+.+
T Consensus 23 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~ 50 (66)
T 1y8f_A 23 TPTYCYECEGLLWGIARQGMRCTECGVK 50 (66)
T ss_dssp SCCCCTTTCCCCCSSCCEEEEETTTCCE
T ss_pred CCcChhhcChhhcccCcceeEcCCCCCe
Confidence 567899999987 44 489999 7665
No 49
>4ayb_N DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_N 2y0s_N 2waq_N 4b1o_N 4b1p_O 2pmz_N 3hkz_N
Probab=45.58 E-value=6.1 Score=27.28 Aligned_cols=14 Identities=29% Similarity=0.574 Sum_probs=11.1
Q ss_pred CCCCcccccccccc
Q 030300 116 GPSRCSSCKKRVGL 129 (179)
Q Consensus 116 ~~~rC~~C~kkvgl 129 (179)
.|-||++|+|-+|-
T Consensus 3 IPVRCFTCGkvi~~ 16 (66)
T 4ayb_N 3 IPIRCFTCGSLIAD 16 (66)
T ss_dssp CCSBCTTTCCBCHH
T ss_pred CCcccCCCcHhHHH
Confidence 36799999997753
No 50
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=45.36 E-value=14 Score=23.10 Aligned_cols=27 Identities=22% Similarity=0.817 Sum_probs=18.4
Q ss_pred CCCCcccccccccc--------------cceeee-cCCcccc
Q 030300 116 GPSRCSSCKKRVGL--------------TGFKCR-CGNLYCV 142 (179)
Q Consensus 116 ~~~rC~~C~kkvgl--------------~gf~Cr-Cg~~FC~ 142 (179)
.+-+|..|+|.... ..|+|. ||..|-.
T Consensus 16 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~ 57 (74)
T 2lce_A 16 KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNR 57 (74)
T ss_dssp CSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESC
T ss_pred CCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCC
Confidence 46789999887542 148887 7776643
No 51
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.27 E-value=19 Score=24.89 Aligned_cols=42 Identities=26% Similarity=0.540 Sum_probs=29.4
Q ss_pred CCCCcccccccc-cc--cceeee-cCCccccCCCCCCCCCCcccch
Q 030300 116 GPSRCSSCKKRV-GL--TGFKCR-CGNLYCVSHRYSDKHNCPFDYR 157 (179)
Q Consensus 116 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk 157 (179)
.+..|..|++.| || .|++|+ |+..+=......=...|..++.
T Consensus 27 ~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~v~~~C~~~~~ 72 (85)
T 2eli_A 27 SPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVPSLCGMDHT 72 (85)
T ss_dssp SCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTTSCSCCCCCCC
T ss_pred CCcCCcccCccccccccCCCcCCCcCCccCHhHHhhcCCcCCcchh
Confidence 578899999987 44 489999 8877533333334457877766
No 52
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.50 E-value=19 Score=22.88 Aligned_cols=26 Identities=19% Similarity=0.558 Sum_probs=18.4
Q ss_pred CCCCcccccccccccceeeecCCcccc
Q 030300 116 GPSRCSSCKKRVGLTGFKCRCGNLYCV 142 (179)
Q Consensus 116 ~~~rC~~C~kkvgl~gf~CrCg~~FC~ 142 (179)
....|..|...+.- ...-.||++||.
T Consensus 19 ~~~~C~IC~~~~~~-~~~~~CgH~fC~ 44 (73)
T 2ysl_A 19 EEVICPICLDILQK-PVTIDCGHNFCL 44 (73)
T ss_dssp CCCBCTTTCSBCSS-EEECTTCCEEEH
T ss_pred cCCEeccCCcccCC-eEEcCCCChhhH
Confidence 34689999876543 334489999996
No 53
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=41.31 E-value=9.1 Score=26.08 Aligned_cols=26 Identities=42% Similarity=1.028 Sum_probs=20.0
Q ss_pred CCCCCcccccccc-cc--cceeee-cCCcc
Q 030300 115 EGPSRCSSCKKRV-GL--TGFKCR-CGNLY 140 (179)
Q Consensus 115 ~~~~rC~~C~kkv-gl--~gf~Cr-Cg~~F 140 (179)
..+..|..|++.| || .|++|+ |+...
T Consensus 32 ~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~ 61 (77)
T 2enn_A 32 PQPTFCSVCHEFVWGLNKQGYQCRQCNAAI 61 (77)
T ss_dssp SSCEECSSSCCEECCTTCCEEECSSSCCEE
T ss_pred CCCcCccccChhhccccccccCcCCCCCcC
Confidence 3578899999987 44 489999 87654
No 54
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.06 E-value=19 Score=23.13 Aligned_cols=46 Identities=13% Similarity=0.293 Sum_probs=26.7
Q ss_pred CCCCcccccccccccceeeecCCccccCC--C-CCCCCCCcccchHHHHH
Q 030300 116 GPSRCSSCKKRVGLTGFKCRCGNLYCVSH--R-YSDKHNCPFDYRTAARD 162 (179)
Q Consensus 116 ~~~rC~~C~kkvgl~gf~CrCg~~FC~~H--R-y~e~H~C~fDyk~~~r~ 162 (179)
....|..|...+.- ...-.||++||..= + +.....|.+--+...++
T Consensus 14 ~~~~C~IC~~~~~~-~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 62 (71)
T 2d8t_A 14 TVPECAICLQTCVH-PVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPED 62 (71)
T ss_dssp SCCBCSSSSSBCSS-EEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCHH
T ss_pred CCCCCccCCcccCC-CEEccCCCHHHHHHHHHHHHCCCcCcCcCchhCHh
Confidence 34679999866533 34457999998531 1 22335676554443333
No 55
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=40.18 E-value=7.7 Score=24.66 Aligned_cols=27 Identities=22% Similarity=0.341 Sum_probs=16.6
Q ss_pred CCcccccccccccceeeecCCccccCC
Q 030300 118 SRCSSCKKRVGLTGFKCRCGNLYCVSH 144 (179)
Q Consensus 118 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 144 (179)
-+|..|++.|....|.=+=|..||..|
T Consensus 40 F~C~~C~~~L~~~~~~~~~g~~yC~~~ 66 (72)
T 3f6q_B 40 FVCAQCFQQFPEGLFYEFEGRKYCEHD 66 (72)
T ss_dssp SSCTTTCCCCGGGCCEEETTEEECHHH
T ss_pred CcccCCCCCCCCCCeEeECCeEeCHHH
Confidence 456677777665555555566666544
No 56
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=39.21 E-value=15 Score=23.97 Aligned_cols=29 Identities=17% Similarity=0.434 Sum_probs=22.4
Q ss_pred CCcccccccccccceeeecCCccccCCCC
Q 030300 118 SRCSSCKKRVGLTGFKCRCGNLYCVSHRY 146 (179)
Q Consensus 118 ~rC~~C~kkvgl~gf~CrCg~~FC~~HRy 146 (179)
-+|..|++.|....|.=+=|.+||..|-.
T Consensus 36 F~C~~C~~~L~~~~f~~~~g~~yC~~cy~ 64 (76)
T 1x68_A 36 FNCGKCSVSLVGKGFLTQNKEIFCQKCGS 64 (76)
T ss_dssp CBCTTTCCBCSSSCEEEETTEEEETTTTC
T ss_pred CChhhCCCcCCCCceEeECCEEECHHHhh
Confidence 57788888887667777888899987743
No 57
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.02 E-value=34 Score=22.00 Aligned_cols=26 Identities=19% Similarity=0.616 Sum_probs=18.3
Q ss_pred CCCcccccccccccceeeecCCccccC
Q 030300 117 PSRCSSCKKRVGLTGFKCRCGNLYCVS 143 (179)
Q Consensus 117 ~~rC~~C~kkvgl~gf~CrCg~~FC~~ 143 (179)
...|..|...+.- ...-.||++||..
T Consensus 19 ~~~C~IC~~~~~~-p~~~~CgH~fC~~ 44 (85)
T 2ecv_A 19 EVTCPICLELLTQ-PLSLDCGHSFCQA 44 (85)
T ss_dssp CCCCTTTCSCCSS-CBCCSSSCCBCTT
T ss_pred CCCCCCCCcccCC-ceeCCCCCHHHHH
Confidence 4679999876533 3444799999963
No 58
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.60 E-value=8.1 Score=26.13 Aligned_cols=25 Identities=24% Similarity=0.703 Sum_probs=19.1
Q ss_pred CCCCcccccccc-cc--cceeee-cCCcc
Q 030300 116 GPSRCSSCKKRV-GL--TGFKCR-CGNLY 140 (179)
Q Consensus 116 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~F 140 (179)
.+..|..|++.| || .|++|+ |+...
T Consensus 27 ~pt~C~~C~~~lwGl~kqG~~C~~C~~~~ 55 (74)
T 2db6_A 27 KPKFCDVCARMIVLNNKFGLRCKNCKTNI 55 (74)
T ss_dssp SCEECSSSCCEECHHHHEEEEESSSCCEE
T ss_pred CCcCchhcChhhccccCCccccCCCCCcc
Confidence 568899999877 33 389999 86653
No 59
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=38.05 E-value=9.7 Score=24.86 Aligned_cols=24 Identities=29% Similarity=0.542 Sum_probs=20.3
Q ss_pred CCCCcccccccccccceeee-cCCc
Q 030300 116 GPSRCSSCKKRVGLTGFKCR-CGNL 139 (179)
Q Consensus 116 ~~~rC~~C~kkvgl~gf~Cr-Cg~~ 139 (179)
.+..|..|+.+++.---.|| ||++
T Consensus 13 ~k~iCpkC~a~~~~gaw~CrKCG~~ 37 (51)
T 3j21_g 13 KKYVCLRCGATNPWGAKKCRKCGYK 37 (51)
T ss_dssp SEEECTTTCCEECTTCSSCSSSSSC
T ss_pred CCccCCCCCCcCCCCceecCCCCCc
Confidence 45679999999888788999 9887
No 60
>2kwq_A Protein MCM10 homolog; DNA replication, DNA binding, zinc motif, zinc ribbon binding protein; NMR {Xenopus laevis}
Probab=37.34 E-value=13 Score=27.06 Aligned_cols=20 Identities=45% Similarity=0.740 Sum_probs=17.6
Q ss_pred ceeeecCCccccCCCCCCCC
Q 030300 131 GFKCRCGNLYCVSHRYSDKH 150 (179)
Q Consensus 131 gf~CrCg~~FC~~HRy~e~H 150 (179)
=|+|.|++..=+.+|||..|
T Consensus 48 FFkC~C~~Rt~sl~r~P~~~ 67 (92)
T 2kwq_A 48 FFKCPCGNRTISLDRLPKKH 67 (92)
T ss_dssp EEECTTSCEEEESSSSCCSC
T ss_pred EEECCCCCceeEeeeCCCCC
Confidence 49999999999999999864
No 61
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=37.22 E-value=36 Score=21.26 Aligned_cols=26 Identities=27% Similarity=0.805 Sum_probs=17.0
Q ss_pred CCCCcccccccccc--------------cceeee-cCCccc
Q 030300 116 GPSRCSSCKKRVGL--------------TGFKCR-CGNLYC 141 (179)
Q Consensus 116 ~~~rC~~C~kkvgl--------------~gf~Cr-Cg~~FC 141 (179)
.+-.|..|.+.... ..|.|. ||..|-
T Consensus 17 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 57 (77)
T 2cot_A 17 RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFI 57 (77)
T ss_dssp CSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEES
T ss_pred CCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccC
Confidence 46788888876542 147777 666664
No 62
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=34.78 E-value=10 Score=24.28 Aligned_cols=27 Identities=26% Similarity=0.559 Sum_probs=17.8
Q ss_pred CCcccccccccccceeeecCCccccCC
Q 030300 118 SRCSSCKKRVGLTGFKCRCGNLYCVSH 144 (179)
Q Consensus 118 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 144 (179)
-+|..|++.|.-..|.=+=|..||..|
T Consensus 32 F~C~~C~~~L~~~~f~~~~g~~yC~~c 58 (70)
T 2d8x_A 32 FRCDLCQEVLADIGFVKNAGRHLCRPC 58 (70)
T ss_dssp SBCSSSCCBCSSSCCEEETTEEECHHH
T ss_pred CEeCCCCCcCCCCccEeECCeEECHHH
Confidence 467777777766666656666666544
No 63
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=34.65 E-value=20 Score=26.39 Aligned_cols=27 Identities=22% Similarity=0.695 Sum_probs=21.2
Q ss_pred CCcccccccccccceeee-cCCccccCCCCC
Q 030300 118 SRCSSCKKRVGLTGFKCR-CGNLYCVSHRYS 147 (179)
Q Consensus 118 ~rC~~C~kkvgl~gf~Cr-Cg~~FC~~HRy~ 147 (179)
-+|..|+|... |.|. |...||..|...
T Consensus 59 c~C~~C~k~~~---~~C~~Cp~sfC~~c~~g 86 (107)
T 4gne_A 59 HQCDECSSAAV---SFCEFCPHSFCKDHEKG 86 (107)
T ss_dssp GBCTTTCSBCC---EECSSSSCEECTTTCTT
T ss_pred CCCCcCCCCCC---cCcCCCCcchhhhccCC
Confidence 35778887643 8999 999999998753
No 64
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.38 E-value=36 Score=22.24 Aligned_cols=26 Identities=19% Similarity=0.420 Sum_probs=18.6
Q ss_pred CCCccccccccccc---ceeeecCCcccc
Q 030300 117 PSRCSSCKKRVGLT---GFKCRCGNLYCV 142 (179)
Q Consensus 117 ~~rC~~C~kkvgl~---gf~CrCg~~FC~ 142 (179)
...|..|...+... ...-.||++||.
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~~CgH~fC~ 43 (88)
T 2ct2_A 15 VLECPICMESFTEEQLRPKLLHCGHTICR 43 (88)
T ss_dssp CCBCTTTCCBCCTTSSCEEECSSSCEEEH
T ss_pred CCCCccCCccccccCCCeEECCCCChhhH
Confidence 46799998776542 344579999986
No 65
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.00 E-value=36 Score=20.42 Aligned_cols=25 Identities=24% Similarity=0.623 Sum_probs=17.9
Q ss_pred CCCcccccccccccceeeecCCcccc
Q 030300 117 PSRCSSCKKRVGLTGFKCRCGNLYCV 142 (179)
Q Consensus 117 ~~rC~~C~kkvgl~gf~CrCg~~FC~ 142 (179)
...|..|...+.. ...-.||++||.
T Consensus 15 ~~~C~IC~~~~~~-p~~~~CgH~fC~ 39 (58)
T 2ecj_A 15 EASCSVCLEYLKE-PVIIECGHNFCK 39 (58)
T ss_dssp CCBCSSSCCBCSS-CCCCSSCCCCCH
T ss_pred CCCCccCCcccCc-cEeCCCCCccCH
Confidence 4679999876543 344579999985
No 66
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.60 E-value=17 Score=19.18 Aligned_cols=12 Identities=33% Similarity=0.667 Sum_probs=6.6
Q ss_pred cceeee-cCCccc
Q 030300 130 TGFKCR-CGNLYC 141 (179)
Q Consensus 130 ~gf~Cr-Cg~~FC 141 (179)
..|+|. ||..|-
T Consensus 8 k~~~C~~C~k~f~ 20 (36)
T 2elq_A 8 KPFKCSLCEYATR 20 (36)
T ss_dssp CSEECSSSSCEES
T ss_pred CCccCCCCCchhC
Confidence 346665 655553
No 67
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=32.26 E-value=13 Score=23.74 Aligned_cols=27 Identities=26% Similarity=0.512 Sum_probs=18.2
Q ss_pred CCCCccccccccccc--------------ceeee-cCCcccc
Q 030300 116 GPSRCSSCKKRVGLT--------------GFKCR-CGNLYCV 142 (179)
Q Consensus 116 ~~~rC~~C~kkvgl~--------------gf~Cr-Cg~~FC~ 142 (179)
.|-.|..|+|..... .|.|. ||..|-.
T Consensus 3 Kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~ 44 (60)
T 4gzn_C 3 RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRD 44 (60)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESS
T ss_pred CCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCC
Confidence 356788887765431 58898 8888754
No 68
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=31.07 E-value=13 Score=25.17 Aligned_cols=10 Identities=20% Similarity=0.763 Sum_probs=4.8
Q ss_pred CCcccccccc
Q 030300 118 SRCSSCKKRV 127 (179)
Q Consensus 118 ~rC~~C~kkv 127 (179)
.+|..|++.|
T Consensus 26 ~~C~~C~~~I 35 (89)
T 1x64_A 26 PLCDKCGSGI 35 (89)
T ss_dssp CBCTTTCCBC
T ss_pred CCcccCCCEe
Confidence 3455555443
No 69
>2uzg_A Ubiquitin carboxyl-terminal hydrolase 33; UBL conjugation pathway, DE-ubiquitination, alternative splicing, metal-binding, thiol protease; NMR {Homo sapiens} SCOP: g.44.1.5
Probab=30.99 E-value=29 Score=24.71 Aligned_cols=31 Identities=26% Similarity=0.604 Sum_probs=21.4
Q ss_pred CCCcccccccccccceeee---cCCccccCCCCCCCC
Q 030300 117 PSRCSSCKKRVGLTGFKCR---CGNLYCVSHRYSDKH 150 (179)
Q Consensus 117 ~~rC~~C~kkvgl~gf~Cr---Cg~~FC~~HRy~e~H 150 (179)
..+|..|.+. +-.-+.|- ||+++|++ |+..|
T Consensus 25 ~~~C~~C~~~-~~~lw~CL~~~Cg~vgCgr--~~~~H 58 (97)
T 2uzg_A 25 LGTCQDCKVQ-GPNLWACLENRCSYVGCGE--SQVDH 58 (97)
T ss_dssp TTCCSSSCCC-CSSCEEECCTTCCCEECCT--TTTCH
T ss_pred CCcCcCcCCC-CCCceeeecccCCCcccCC--CcChH
Confidence 4689999843 22226887 99999997 54433
No 70
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=30.75 E-value=38 Score=21.90 Aligned_cols=27 Identities=30% Similarity=0.612 Sum_probs=18.9
Q ss_pred CCCCcccccccccccceeee-cCCccccC
Q 030300 116 GPSRCSSCKKRVGLTGFKCR-CGNLYCVS 143 (179)
Q Consensus 116 ~~~rC~~C~kkvgl~gf~Cr-Cg~~FC~~ 143 (179)
....|..|...+. ....-. ||++||..
T Consensus 14 ~~~~C~IC~~~~~-~p~~~~~CgH~fC~~ 41 (74)
T 2yur_A 14 DELLCLICKDIMT-DAVVIPCCGNSYCDE 41 (74)
T ss_dssp GGGSCSSSCCCCT-TCEECSSSCCEECTT
T ss_pred CCCCCcCCChHHh-CCeEcCCCCCHHHHH
Confidence 3468999976443 256677 99999963
No 71
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=30.48 E-value=55 Score=20.94 Aligned_cols=25 Identities=16% Similarity=0.522 Sum_probs=17.8
Q ss_pred CCCcccccccccccceeeecCCcccc
Q 030300 117 PSRCSSCKKRVGLTGFKCRCGNLYCV 142 (179)
Q Consensus 117 ~~rC~~C~kkvgl~gf~CrCg~~FC~ 142 (179)
...|..|...+.- .....||++||.
T Consensus 19 ~~~C~IC~~~~~~-p~~~~CgH~fC~ 43 (85)
T 2ecw_A 19 EVTCPICLELLKE-PVSADCNHSFCR 43 (85)
T ss_dssp TTSCTTTCSCCSS-CEECTTSCCBCH
T ss_pred CCCCcCCChhhCc-ceeCCCCCHHHH
Confidence 4689999765432 345679999985
No 72
>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7
Probab=30.16 E-value=13 Score=24.82 Aligned_cols=23 Identities=26% Similarity=0.577 Sum_probs=19.4
Q ss_pred CCCCcccccccccccceeee-cCC
Q 030300 116 GPSRCSSCKKRVGLTGFKCR-CGN 138 (179)
Q Consensus 116 ~~~rC~~C~kkvgl~gf~Cr-Cg~ 138 (179)
...-|..|..++....-.|| ||+
T Consensus 18 ~k~ICrkC~ARnp~~A~~CRKCg~ 41 (56)
T 2ayj_A 18 LKKVCRKCGALNPIRATKCRRCHS 41 (56)
T ss_dssp CCEEETTTCCEECTTCSSCTTTCC
T ss_pred chhhhccccCcCCcccccccCCCC
Confidence 45678999999999999999 874
No 73
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=29.66 E-value=14 Score=23.33 Aligned_cols=27 Identities=30% Similarity=0.456 Sum_probs=17.2
Q ss_pred CCcccccccccccceeeecCCccccCC
Q 030300 118 SRCSSCKKRVGLTGFKCRCGNLYCVSH 144 (179)
Q Consensus 118 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 144 (179)
-+|..|++.|.-..|.=+=|..||..|
T Consensus 32 F~C~~C~~~L~~~~~~~~~g~~yC~~~ 58 (66)
T 1nyp_A 32 FVCAKCEKPFLGHRHYERKGLAYCETH 58 (66)
T ss_dssp CBCTTTCCBCSSSCCEEETTEEECHHH
T ss_pred CEECCCCCCCCCCceEeECCcEECHHH
Confidence 467777777765556666666666543
No 74
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.64 E-value=30 Score=21.44 Aligned_cols=27 Identities=22% Similarity=0.660 Sum_probs=18.2
Q ss_pred CCCCccccccccccc------ceeeecCCcccc
Q 030300 116 GPSRCSSCKKRVGLT------GFKCRCGNLYCV 142 (179)
Q Consensus 116 ~~~rC~~C~kkvgl~------gf~CrCg~~FC~ 142 (179)
....|..|...+... ...-.||++||.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~ 46 (69)
T 2ea6_A 14 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCS 46 (69)
T ss_dssp CCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEH
T ss_pred CCCCCcccCccccccccccCCeEeCCCCChhcH
Confidence 356799998765432 145579999984
No 75
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=29.55 E-value=48 Score=21.76 Aligned_cols=27 Identities=15% Similarity=0.468 Sum_probs=19.2
Q ss_pred CCCCcccccccccc--------------cceeee-cCCcccc
Q 030300 116 GPSRCSSCKKRVGL--------------TGFKCR-CGNLYCV 142 (179)
Q Consensus 116 ~~~rC~~C~kkvgl--------------~gf~Cr-Cg~~FC~ 142 (179)
.+-.|..|.+.... ..|.|. |+..|-.
T Consensus 16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~ 57 (106)
T 2ee8_A 16 KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRR 57 (106)
T ss_dssp CCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSC
T ss_pred cCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCC
Confidence 45789999886542 148898 8888854
No 76
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.51 E-value=15 Score=23.57 Aligned_cols=26 Identities=23% Similarity=0.475 Sum_probs=13.4
Q ss_pred CCcccccccccccceeeecCCccccC
Q 030300 118 SRCSSCKKRVGLTGFKCRCGNLYCVS 143 (179)
Q Consensus 118 ~rC~~C~kkvgl~gf~CrCg~~FC~~ 143 (179)
-+|..|++.|....|.=+=|..||..
T Consensus 34 F~C~~C~~~L~~~~~~~~~~~~yC~~ 59 (72)
T 1x61_A 34 FVCSTCRAQLRGQHFYAVERRAYCEG 59 (72)
T ss_dssp CBCSSSCCBCTTSCEEESSSCEEEHH
T ss_pred CcccccCCcCCcCcCEeeCCeEECHH
Confidence 35556666664444544444555543
No 77
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.39 E-value=15 Score=23.59 Aligned_cols=27 Identities=19% Similarity=0.441 Sum_probs=18.0
Q ss_pred CCcccccccccccceeeecCCccccCC
Q 030300 118 SRCSSCKKRVGLTGFKCRCGNLYCVSH 144 (179)
Q Consensus 118 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 144 (179)
-+|..|++.|.-..|.=+=|..||..|
T Consensus 36 F~C~~C~~~L~~~~f~~~~g~~yC~~c 62 (72)
T 1x4l_A 36 FNCKKCSLSLVGRGFLTERDDILCPDC 62 (72)
T ss_dssp CBCSSSCCBCTTSCCEECSSSEECHHH
T ss_pred CEeccCCCcCCCCccEeECCEEEChhH
Confidence 467777877765566666677777544
No 78
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.74 E-value=15 Score=23.85 Aligned_cols=25 Identities=24% Similarity=0.400 Sum_probs=12.9
Q ss_pred CcccccccccccceeeecCCccccC
Q 030300 119 RCSSCKKRVGLTGFKCRCGNLYCVS 143 (179)
Q Consensus 119 rC~~C~kkvgl~gf~CrCg~~FC~~ 143 (179)
+|..|++.|....|.=+=|..||..
T Consensus 41 ~C~~C~~~L~~~~~~~~~g~~yC~~ 65 (77)
T 1g47_A 41 VCAQCFQQFPEGLFYEFEGRKYCEH 65 (77)
T ss_dssp CCTTTCCCCGGGCSEEETTEEECHH
T ss_pred eECCCCCCCCCCCeEeECCeEeCHH
Confidence 4555566555544554545555443
No 79
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.36 E-value=42 Score=21.90 Aligned_cols=26 Identities=23% Similarity=0.622 Sum_probs=18.2
Q ss_pred CCCCcccccccccccceeeecCCcccc
Q 030300 116 GPSRCSSCKKRVGLTGFKCRCGNLYCV 142 (179)
Q Consensus 116 ~~~rC~~C~kkvgl~gf~CrCg~~FC~ 142 (179)
....|..|...+.- ...-.||++||.
T Consensus 14 ~~~~C~IC~~~~~~-p~~~~CgH~fC~ 39 (81)
T 2csy_A 14 IPFRCFICRQAFQN-PVVTKCRHYFCE 39 (81)
T ss_dssp CCSBCSSSCSBCCS-EEECTTSCEEEH
T ss_pred CCCCCcCCCchhcC-eeEccCCCHhHH
Confidence 34679999766533 445679999985
No 80
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=28.32 E-value=27 Score=20.34 Aligned_cols=11 Identities=18% Similarity=0.739 Sum_probs=6.6
Q ss_pred ceeee-cCCccc
Q 030300 131 GFKCR-CGNLYC 141 (179)
Q Consensus 131 gf~Cr-Cg~~FC 141 (179)
.|.|. ||..|-
T Consensus 29 ~~~C~~C~~~f~ 40 (57)
T 1bbo_A 29 PYHCTYCNFSFK 40 (57)
T ss_dssp CEECSSSSCEES
T ss_pred CccCCCCCchhc
Confidence 46776 666553
No 81
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.30 E-value=30 Score=22.74 Aligned_cols=28 Identities=25% Similarity=0.647 Sum_probs=21.8
Q ss_pred CCcccccccccccceeeecCCccccCCC
Q 030300 118 SRCSSCKKRVGLTGFKCRCGNLYCVSHR 145 (179)
Q Consensus 118 ~rC~~C~kkvgl~gf~CrCg~~FC~~HR 145 (179)
-+|..|++.|.-..|.=+=|.+||..|-
T Consensus 44 F~C~~C~~~L~~~~f~~~~~~~~C~~c~ 71 (82)
T 2ehe_A 44 FRCCRCQRSLADEPFTCQDSELLCNDCY 71 (82)
T ss_dssp SBCTTTCCBCSSCCEEEETTEEEETTTS
T ss_pred CeecCCCCccCCCccEeeCCEEECHHHH
Confidence 5678888888766787777888887764
No 82
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=28.20 E-value=24 Score=27.47 Aligned_cols=30 Identities=23% Similarity=0.577 Sum_probs=25.6
Q ss_pred CCCCccccccccccc---ceeee-cCCccccCCC
Q 030300 116 GPSRCSSCKKRVGLT---GFKCR-CGNLYCVSHR 145 (179)
Q Consensus 116 ~~~rC~~C~kkvgl~---gf~Cr-Cg~~FC~~HR 145 (179)
....|..|.+.+|++ |..|. |...+|..=+
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~ 100 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCS 100 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGE
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhcccc
Confidence 468999999999997 78998 9999998655
No 83
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=27.80 E-value=17 Score=17.59 Aligned_cols=10 Identities=30% Similarity=1.092 Sum_probs=5.3
Q ss_pred eeee-cCCccc
Q 030300 132 FKCR-CGNLYC 141 (179)
Q Consensus 132 f~Cr-Cg~~FC 141 (179)
|+|. ||..|-
T Consensus 2 ~~C~~C~k~f~ 12 (27)
T 1znf_A 2 YKCGLCERSFV 12 (27)
T ss_dssp CBCSSSCCBCS
T ss_pred ccCCCCCCcCC
Confidence 4555 555554
No 84
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=27.59 E-value=26 Score=20.36 Aligned_cols=11 Identities=36% Similarity=0.694 Sum_probs=6.5
Q ss_pred CCCcccccccc
Q 030300 117 PSRCSSCKKRV 127 (179)
Q Consensus 117 ~~rC~~C~kkv 127 (179)
+-.|..|++..
T Consensus 4 ~~~C~~C~~~f 14 (57)
T 3uk3_C 4 SRECSYCGKFF 14 (57)
T ss_dssp -CBCTTTCCBC
T ss_pred CccCCCCcchh
Confidence 45677777654
No 85
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=27.51 E-value=20 Score=22.13 Aligned_cols=26 Identities=19% Similarity=0.526 Sum_probs=16.7
Q ss_pred CCCCcccccccc-----------cccceeee-cCCccc
Q 030300 116 GPSRCSSCKKRV-----------GLTGFKCR-CGNLYC 141 (179)
Q Consensus 116 ~~~rC~~C~kkv-----------gl~gf~Cr-Cg~~FC 141 (179)
.+-.|..|+|.. |-..|+|. ||..|-
T Consensus 13 k~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~ 50 (62)
T 1vd4_A 13 ASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVE 50 (62)
T ss_dssp SEEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCE
T ss_pred CCccCCCCCchhccHHHhHhhcCCCCCEECCCCCCccc
Confidence 356788888742 12258887 877774
No 86
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.51 E-value=17 Score=23.23 Aligned_cols=27 Identities=22% Similarity=0.579 Sum_probs=16.4
Q ss_pred CCcccccccccccceeeecCCccccCC
Q 030300 118 SRCSSCKKRVGLTGFKCRCGNLYCVSH 144 (179)
Q Consensus 118 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 144 (179)
-+|..|++.|....|.=+=|..||..|
T Consensus 34 F~C~~C~~~L~~~~~~~~~~~~yC~~c 60 (72)
T 1x4k_A 34 FICHRCQQPIGTKSFIPKDNQNFCVPC 60 (72)
T ss_dssp TCCSSSCCCCCSSSEEEETTEEEEHHH
T ss_pred CcccccCCccCCCccCccCCeEECHHH
Confidence 456677777665556555566666543
No 87
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=27.02 E-value=18 Score=17.68 Aligned_cols=10 Identities=30% Similarity=1.308 Sum_probs=5.9
Q ss_pred eeee-cCCccc
Q 030300 132 FKCR-CGNLYC 141 (179)
Q Consensus 132 f~Cr-Cg~~FC 141 (179)
|.|. ||..|-
T Consensus 4 ~~C~~C~~~f~ 14 (30)
T 2m0d_A 4 YQCDYCGRSFS 14 (30)
T ss_dssp EECTTTCCEES
T ss_pred ccCCCCCcccC
Confidence 5565 666664
No 88
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=26.92 E-value=29 Score=20.47 Aligned_cols=11 Identities=18% Similarity=0.878 Sum_probs=6.4
Q ss_pred ceeee-cCCccc
Q 030300 131 GFKCR-CGNLYC 141 (179)
Q Consensus 131 gf~Cr-Cg~~FC 141 (179)
.|.|. ||..|-
T Consensus 30 ~~~C~~C~~~f~ 41 (60)
T 2adr_A 30 PYPCGLCNRAFT 41 (60)
T ss_dssp SEECTTTCCEES
T ss_pred CccCCCCCCccC
Confidence 46676 665553
No 89
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=26.60 E-value=35 Score=23.21 Aligned_cols=27 Identities=19% Similarity=0.541 Sum_probs=18.3
Q ss_pred CCCCccccccccccc--------------ceeee-cCCcccc
Q 030300 116 GPSRCSSCKKRVGLT--------------GFKCR-CGNLYCV 142 (179)
Q Consensus 116 ~~~rC~~C~kkvgl~--------------gf~Cr-Cg~~FC~ 142 (179)
..-.|..|+|...-. .|.|. ||..|-.
T Consensus 27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~ 68 (85)
T 2lv2_A 27 ECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYS 68 (85)
T ss_dssp TTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESS
T ss_pred CCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCC
Confidence 346788998864331 58887 8877743
No 90
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=26.54 E-value=19 Score=17.62 Aligned_cols=12 Identities=25% Similarity=1.071 Sum_probs=7.0
Q ss_pred ceeee-cCCcccc
Q 030300 131 GFKCR-CGNLYCV 142 (179)
Q Consensus 131 gf~Cr-Cg~~FC~ 142 (179)
.|.|. ||..|-.
T Consensus 3 ~~~C~~C~k~f~~ 15 (28)
T 2kvf_A 3 PYSCSVCGKRFSL 15 (28)
T ss_dssp SEECSSSCCEESC
T ss_pred CccCCCCCcccCC
Confidence 35666 6666643
No 91
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.37 E-value=11 Score=24.90 Aligned_cols=24 Identities=21% Similarity=0.555 Sum_probs=10.9
Q ss_pred CcccccccccccceeeecCCcccc
Q 030300 119 RCSSCKKRVGLTGFKCRCGNLYCV 142 (179)
Q Consensus 119 rC~~C~kkvgl~gf~CrCg~~FC~ 142 (179)
+|..|++.|.-..|.=+=|..||.
T Consensus 43 ~C~~C~~~L~~~~~~~~~g~~yC~ 66 (79)
T 1x62_A 43 VCTDCGTNLKQKGHFFVEDQIYCE 66 (79)
T ss_dssp SCSSSCCCHHHHCCEESSSCEECH
T ss_pred eeCCCCCCCCCCCeEeECCEEECH
Confidence 444555554433344444444443
No 92
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=26.33 E-value=19 Score=17.62 Aligned_cols=10 Identities=30% Similarity=0.756 Sum_probs=5.6
Q ss_pred eeee-cCCccc
Q 030300 132 FKCR-CGNLYC 141 (179)
Q Consensus 132 f~Cr-Cg~~FC 141 (179)
|.|. ||..|-
T Consensus 4 ~~C~~C~k~f~ 14 (27)
T 2kvh_A 4 FSCSLCPQRSR 14 (27)
T ss_dssp EECSSSSCEES
T ss_pred ccCCCcChhhC
Confidence 5565 665553
No 93
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=26.29 E-value=17 Score=17.74 Aligned_cols=10 Identities=30% Similarity=1.075 Sum_probs=5.4
Q ss_pred eeee-cCCccc
Q 030300 132 FKCR-CGNLYC 141 (179)
Q Consensus 132 f~Cr-Cg~~FC 141 (179)
|.|. ||..|-
T Consensus 3 ~~C~~C~~~f~ 13 (29)
T 1ard_A 3 FVCEVCTRAFA 13 (29)
T ss_dssp CBCTTTCCBCS
T ss_pred eECCCCCcccC
Confidence 5555 555553
No 94
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=26.19 E-value=15 Score=25.95 Aligned_cols=42 Identities=24% Similarity=0.456 Sum_probs=25.9
Q ss_pred CCCCCccccccccccc-----ceeee-cCCccccCCCC---CCCCCCcccc
Q 030300 115 EGPSRCSSCKKRVGLT-----GFKCR-CGNLYCVSHRY---SDKHNCPFDY 156 (179)
Q Consensus 115 ~~~~rC~~C~kkvgl~-----gf~Cr-Cg~~FC~~HRy---~e~H~C~fDy 156 (179)
..+..|..|++.|=-+ ||+|+ |+.+.=.++.. .--..|..+|
T Consensus 33 ~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~k~~~v~~~C~~~~ 83 (84)
T 2row_A 33 HFPTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMDKKEEIIAPCKVYY 83 (84)
T ss_dssp SSCEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHHHTCTTCCCCSTTT
T ss_pred CCCcchhhcCHhhhccccCCCCCEecCCCCccchhHhCCccccccccCcCC
Confidence 4567899999877432 89999 76655333333 2334555444
No 95
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=25.87 E-value=17 Score=25.88 Aligned_cols=14 Identities=21% Similarity=0.916 Sum_probs=10.8
Q ss_pred ccceeeecCCcccc
Q 030300 129 LTGFKCRCGNLYCV 142 (179)
Q Consensus 129 l~gf~CrCg~~FC~ 142 (179)
..-+.||||..|--
T Consensus 21 ~y~ypCrCGd~F~i 34 (83)
T 1yop_A 21 MFTYPCPCGDRFQI 34 (83)
T ss_dssp EEEEEETTTEEEEE
T ss_pred EEEEeCCCCCeEEE
Confidence 35688999988843
No 96
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=31.74 E-value=14 Score=17.92 Aligned_cols=12 Identities=33% Similarity=1.049 Sum_probs=7.4
Q ss_pred eeee-cCCccccC
Q 030300 132 FKCR-CGNLYCVS 143 (179)
Q Consensus 132 f~Cr-Cg~~FC~~ 143 (179)
|.|. ||..|-..
T Consensus 3 ~~C~~C~k~f~~~ 15 (26)
T 2lvu_A 3 YVCERCGKRFVQS 15 (26)
Confidence 5665 77667543
No 97
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=25.73 E-value=32 Score=26.11 Aligned_cols=30 Identities=27% Similarity=0.757 Sum_probs=24.6
Q ss_pred CCCCccccccccccc---ceeee-cCCccccCCC
Q 030300 116 GPSRCSSCKKRVGLT---GFKCR-CGNLYCVSHR 145 (179)
Q Consensus 116 ~~~rC~~C~kkvgl~---gf~Cr-Cg~~FC~~HR 145 (179)
....|..|.+.+|++ |..|. |...+|..=+
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~ 87 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCG 87 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSE
T ss_pred CCccccccCCCcccccCCCCCCCCCCcccccccC
Confidence 457899999999975 67898 9999998543
No 98
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=25.63 E-value=19 Score=17.48 Aligned_cols=10 Identities=50% Similarity=1.441 Sum_probs=5.7
Q ss_pred eeee-cCCccc
Q 030300 132 FKCR-CGNLYC 141 (179)
Q Consensus 132 f~Cr-Cg~~FC 141 (179)
|.|. ||..|-
T Consensus 3 ~~C~~C~k~f~ 13 (29)
T 2m0f_A 3 LKCRECGKQFT 13 (29)
T ss_dssp EECTTTSCEES
T ss_pred ccCCCCCCccC
Confidence 5565 665554
No 99
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.10 E-value=24 Score=18.61 Aligned_cols=10 Identities=20% Similarity=1.022 Sum_probs=5.4
Q ss_pred ceeee-cCCcc
Q 030300 131 GFKCR-CGNLY 140 (179)
Q Consensus 131 gf~Cr-Cg~~F 140 (179)
.|.|. ||..|
T Consensus 9 ~~~C~~C~k~f 19 (37)
T 2elo_A 9 SYSCPVCEKSF 19 (37)
T ss_dssp CCEETTTTEEC
T ss_pred CcCCCCCCCcc
Confidence 45565 55555
No 100
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=25.08 E-value=23 Score=23.97 Aligned_cols=25 Identities=28% Similarity=0.797 Sum_probs=18.2
Q ss_pred CCccccccccccc---ceeeecCCcccc
Q 030300 118 SRCSSCKKRVGLT---GFKCRCGNLYCV 142 (179)
Q Consensus 118 ~rC~~C~kkvgl~---gf~CrCg~~FC~ 142 (179)
..|..|--.+.+. -+-|.||+.||.
T Consensus 12 ~~CpICle~~~~~d~~~~p~~CGH~fC~ 39 (78)
T 1e4u_A 12 VECPLCMEPLEIDDINFFPCTCGYQICR 39 (78)
T ss_dssp CBCTTTCCBCCTTTTTCCSSTTSCCCCH
T ss_pred CcCCccCccCccccccccccCCCCCcCH
Confidence 4688888776543 355889999994
No 101
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.05 E-value=28 Score=22.59 Aligned_cols=25 Identities=24% Similarity=0.590 Sum_probs=16.2
Q ss_pred CCcccccccccccceeeecCCcccc
Q 030300 118 SRCSSCKKRVGLTGFKCRCGNLYCV 142 (179)
Q Consensus 118 ~rC~~C~kkvgl~gf~CrCg~~FC~ 142 (179)
-+|..|++.|....|.=+=|..||.
T Consensus 37 F~C~~C~~~L~~~~~~~~~g~~yC~ 61 (76)
T 2cu8_A 37 LKCERCSKTLTPGGHAEHDGKPFCH 61 (76)
T ss_dssp CBCSSSCCBCCTTSCEEETTEEECT
T ss_pred CCCCCCCCccCCCceEeECCEEecc
Confidence 4667777777655566565666665
No 102
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=25.00 E-value=18 Score=26.04 Aligned_cols=12 Identities=25% Similarity=0.808 Sum_probs=9.9
Q ss_pred ccceeeecCCcc
Q 030300 129 LTGFKCRCGNLY 140 (179)
Q Consensus 129 l~gf~CrCg~~F 140 (179)
..-+.||||..|
T Consensus 21 ~y~ypCrCGd~F 32 (89)
T 2jr7_A 21 TYFYPCPCGDNF 32 (89)
T ss_dssp EEEEECTTSSEE
T ss_pred EEEEcCCCCCEE
Confidence 456899999988
No 103
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.94 E-value=20 Score=22.92 Aligned_cols=27 Identities=33% Similarity=0.669 Sum_probs=16.8
Q ss_pred CCcccccccccccceeeecCCccccCC
Q 030300 118 SRCSSCKKRVGLTGFKCRCGNLYCVSH 144 (179)
Q Consensus 118 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 144 (179)
-+|..|++.|....|.=+=|..||..|
T Consensus 34 F~C~~C~~~L~~~~~~~~~~~~yC~~c 60 (72)
T 1wyh_A 34 FLCSGCEQPLGSRSFVPDKGAHYCVPC 60 (72)
T ss_dssp CBCTTTCCBTTTSCEEEETTEEEEHHH
T ss_pred CeECCCCCcCCCCccCCcCCeEECHHH
Confidence 456677777766556656566666543
No 104
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=24.73 E-value=19 Score=17.79 Aligned_cols=10 Identities=20% Similarity=0.687 Sum_probs=5.8
Q ss_pred eeee-cCCccc
Q 030300 132 FKCR-CGNLYC 141 (179)
Q Consensus 132 f~Cr-Cg~~FC 141 (179)
|+|. ||..|-
T Consensus 4 ~~C~~C~k~f~ 14 (27)
T 2kvg_A 4 YRCPLCRAGCP 14 (27)
T ss_dssp EEETTTTEEES
T ss_pred cCCCCCCcccC
Confidence 5665 665553
No 105
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=24.58 E-value=25 Score=18.08 Aligned_cols=11 Identities=27% Similarity=0.963 Sum_probs=5.8
Q ss_pred ceeee-cCCccc
Q 030300 131 GFKCR-CGNLYC 141 (179)
Q Consensus 131 gf~Cr-Cg~~FC 141 (179)
.|.|. ||..|-
T Consensus 7 ~~~C~~C~k~f~ 18 (35)
T 2elx_A 7 GYVCALCLKKFV 18 (35)
T ss_dssp SEECSSSCCEES
T ss_pred CeECCCCcchhC
Confidence 45565 555553
No 106
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.46 E-value=48 Score=21.13 Aligned_cols=25 Identities=24% Similarity=0.394 Sum_probs=17.6
Q ss_pred CCCcccccccccccceee-ecCCcccc
Q 030300 117 PSRCSSCKKRVGLTGFKC-RCGNLYCV 142 (179)
Q Consensus 117 ~~rC~~C~kkvgl~gf~C-rCg~~FC~ 142 (179)
...|..|...+.- ...- .||++||.
T Consensus 15 ~~~C~IC~~~~~~-p~~~~~CgH~fC~ 40 (72)
T 2djb_A 15 YILCSICKGYLID-ATTITECLHTFCK 40 (72)
T ss_dssp GGSCTTTSSCCSS-CEECSSSCCEECH
T ss_pred CCCCCCCChHHHC-cCEECCCCCHHHH
Confidence 4679999765433 4444 79999986
No 107
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.45 E-value=21 Score=24.10 Aligned_cols=11 Identities=18% Similarity=0.791 Sum_probs=6.8
Q ss_pred CCCcccccccc
Q 030300 117 PSRCSSCKKRV 127 (179)
Q Consensus 117 ~~rC~~C~kkv 127 (179)
..+|..|++.|
T Consensus 25 ~~~C~~C~~~I 35 (90)
T 2dar_A 25 TPMCAHCNQVI 35 (90)
T ss_dssp CCBBSSSCCBC
T ss_pred CCCCccCCCEe
Confidence 45666666655
No 108
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=24.45 E-value=19 Score=23.75 Aligned_cols=25 Identities=28% Similarity=0.598 Sum_probs=12.8
Q ss_pred CcccccccccccceeeecCCccccC
Q 030300 119 RCSSCKKRVGLTGFKCRCGNLYCVS 143 (179)
Q Consensus 119 rC~~C~kkvgl~gf~CrCg~~FC~~ 143 (179)
+|..|++.|....|.=+=|..||..
T Consensus 36 ~C~~C~~~L~~~~~~~~~~~~yC~~ 60 (81)
T 1a7i_A 36 LCMVCRKNLDSTTVAIHDAEVYCKS 60 (81)
T ss_dssp ECSSSCCEECSSCCEEETTEEECSH
T ss_pred ccCCCCCCCCCCCeEeeCCEEECHH
Confidence 4555666555444544444455543
No 109
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=24.33 E-value=33 Score=24.30 Aligned_cols=26 Identities=23% Similarity=0.593 Sum_probs=17.2
Q ss_pred CCCcccccccccccceee-ecCCccccC
Q 030300 117 PSRCSSCKKRVGLTGFKC-RCGNLYCVS 143 (179)
Q Consensus 117 ~~rC~~C~kkvgl~gf~C-rCg~~FC~~ 143 (179)
.-.|..|..-+.- ...- .||++||..
T Consensus 22 ~~~C~IC~~~~~~-pv~~~~CgH~fC~~ 48 (117)
T 1jm7_B 22 LLRCSRCTNILRE-PVCLGGCEHIFCSN 48 (117)
T ss_dssp TTSCSSSCSCCSS-CBCCCSSSCCBCTT
T ss_pred CCCCCCCChHhhC-ccEeCCCCCHHHHH
Confidence 4678888754432 3444 799999864
No 110
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=24.27 E-value=26 Score=18.44 Aligned_cols=8 Identities=25% Similarity=1.074 Sum_probs=3.4
Q ss_pred CCcccccc
Q 030300 118 SRCSSCKK 125 (179)
Q Consensus 118 ~rC~~C~k 125 (179)
-+|..|.|
T Consensus 12 ~~C~~C~k 19 (37)
T 1p7a_A 12 FQCPDCDR 19 (37)
T ss_dssp BCCTTTCC
T ss_pred ccCCCCCc
Confidence 34444443
No 111
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=24.02 E-value=21 Score=17.66 Aligned_cols=11 Identities=18% Similarity=0.872 Sum_probs=6.2
Q ss_pred eeee-cCCcccc
Q 030300 132 FKCR-CGNLYCV 142 (179)
Q Consensus 132 f~Cr-Cg~~FC~ 142 (179)
|.|. ||..|-.
T Consensus 3 ~~C~~C~k~f~~ 14 (30)
T 1paa_A 3 YACGLCNRAFTR 14 (30)
T ss_dssp SBCTTTCCBCSS
T ss_pred cCCcccCcccCC
Confidence 5555 6666643
No 112
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.01 E-value=21 Score=23.41 Aligned_cols=27 Identities=33% Similarity=0.754 Sum_probs=18.3
Q ss_pred CCcccccccccccceeeecCCccccCC
Q 030300 118 SRCSSCKKRVGLTGFKCRCGNLYCVSH 144 (179)
Q Consensus 118 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 144 (179)
-+|..|++.|....|.=+=|..||..|
T Consensus 44 F~C~~C~~~L~~~~~~~~~~~~yC~~c 70 (82)
T 1x63_A 44 FTCSNCKQVIGTGSFFPKGEDFYCVTC 70 (82)
T ss_dssp CCCSSSCCCCTTSCEEEETTEEEEHHH
T ss_pred CchhhCCCccCCCccEeeCCEEECHHH
Confidence 467788887776666666666776544
No 113
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.98 E-value=21 Score=22.65 Aligned_cols=26 Identities=27% Similarity=0.666 Sum_probs=14.4
Q ss_pred CCcccccccccccceeeecCCccccC
Q 030300 118 SRCSSCKKRVGLTGFKCRCGNLYCVS 143 (179)
Q Consensus 118 ~rC~~C~kkvgl~gf~CrCg~~FC~~ 143 (179)
-+|..|++.|.-..|.=+=|..||..
T Consensus 32 F~C~~C~~~L~~~~~~~~~~~~yC~~ 57 (70)
T 2d8z_A 32 FVCTACRKQLSGQRFTARDDFAYCLN 57 (70)
T ss_dssp SBCSSSCCBCTTSCCEESSSSEECHH
T ss_pred CccCCCCCcCCcCceEeeCCeEECHH
Confidence 45667777665444554444555543
No 114
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.97 E-value=23 Score=23.72 Aligned_cols=13 Identities=23% Similarity=0.672 Sum_probs=10.0
Q ss_pred CCCCccccccccc
Q 030300 116 GPSRCSSCKKRVG 128 (179)
Q Consensus 116 ~~~rC~~C~kkvg 128 (179)
.+-.|..|.|...
T Consensus 23 ~~~~C~~C~k~f~ 35 (98)
T 2gqj_A 23 GEAVCPTCNVVTR 35 (98)
T ss_dssp SCCCCTTTCCCCS
T ss_pred CCcCCCCCCCChh
Confidence 4678889988766
No 115
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=23.92 E-value=21 Score=24.43 Aligned_cols=23 Identities=26% Similarity=0.904 Sum_probs=18.2
Q ss_pred CCCCccccccccccc---ceeee-cCC
Q 030300 116 GPSRCSSCKKRVGLT---GFKCR-CGN 138 (179)
Q Consensus 116 ~~~rC~~C~kkvgl~---gf~Cr-Cg~ 138 (179)
-.-.|..|+..+.+. ...|+ ||+
T Consensus 27 v~Y~C~~CG~~~e~~~~d~irCp~CG~ 53 (70)
T 1twf_L 27 LKYICAECSSKLSLSRTDAVRCKDCGH 53 (70)
T ss_dssp CCEECSSSCCEECCCTTSTTCCSSSCC
T ss_pred EEEECCCCCCcceeCCCCCccCCCCCc
Confidence 457899999997775 47888 876
No 116
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=23.76 E-value=19 Score=17.55 Aligned_cols=10 Identities=20% Similarity=0.786 Sum_probs=5.0
Q ss_pred eeee-cCCccc
Q 030300 132 FKCR-CGNLYC 141 (179)
Q Consensus 132 f~Cr-Cg~~FC 141 (179)
|.|. ||..|-
T Consensus 3 ~~C~~C~k~f~ 13 (30)
T 1klr_A 3 YQCQYCEFRSA 13 (30)
T ss_dssp CCCSSSSCCCS
T ss_pred ccCCCCCCccC
Confidence 4454 555553
No 117
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=23.67 E-value=43 Score=20.67 Aligned_cols=12 Identities=33% Similarity=0.761 Sum_probs=8.3
Q ss_pred CCCCcccccccc
Q 030300 116 GPSRCSSCKKRV 127 (179)
Q Consensus 116 ~~~rC~~C~kkv 127 (179)
.+-.|..|.+..
T Consensus 13 k~~~C~~C~k~f 24 (72)
T 1x6e_A 13 KPYGCVECGKAF 24 (72)
T ss_dssp CCEECSSSCCEE
T ss_pred CCccCCCCCCcc
Confidence 456788887754
No 118
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=23.56 E-value=27 Score=18.10 Aligned_cols=11 Identities=36% Similarity=0.948 Sum_probs=5.9
Q ss_pred ceeee-cCCccc
Q 030300 131 GFKCR-CGNLYC 141 (179)
Q Consensus 131 gf~Cr-Cg~~FC 141 (179)
.|.|. ||..|-
T Consensus 7 ~~~C~~C~k~f~ 18 (35)
T 1srk_A 7 PFVCRICLSAFT 18 (35)
T ss_dssp CEECSSSCCEES
T ss_pred CeeCCCCCcccC
Confidence 45565 555553
No 119
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=23.40 E-value=21 Score=17.28 Aligned_cols=11 Identities=27% Similarity=0.782 Sum_probs=6.4
Q ss_pred eeee-cCCcccc
Q 030300 132 FKCR-CGNLYCV 142 (179)
Q Consensus 132 f~Cr-Cg~~FC~ 142 (179)
|.|. ||..|..
T Consensus 3 ~~C~~C~~~f~~ 14 (29)
T 2m0e_A 3 HKCPHCDKKFNQ 14 (29)
T ss_dssp CCCSSCCCCCCT
T ss_pred CcCCCCCcccCC
Confidence 5565 6666653
No 120
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=23.25 E-value=38 Score=20.75 Aligned_cols=12 Identities=33% Similarity=0.897 Sum_probs=7.9
Q ss_pred CCCCcccccccc
Q 030300 116 GPSRCSSCKKRV 127 (179)
Q Consensus 116 ~~~rC~~C~kkv 127 (179)
.+-.|..|.+..
T Consensus 8 ~~~~C~~C~k~f 19 (70)
T 1x5w_A 8 HPEKCSECSYSC 19 (70)
T ss_dssp CSEECSSSSCEE
T ss_pred CCeECCCCCccc
Confidence 356788887753
No 121
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.14 E-value=34 Score=24.05 Aligned_cols=31 Identities=29% Similarity=0.768 Sum_probs=25.3
Q ss_pred CCCCccccccccccc---ceeee-cCCccccCCCC
Q 030300 116 GPSRCSSCKKRVGLT---GFKCR-CGNLYCVSHRY 146 (179)
Q Consensus 116 ~~~rC~~C~kkvgl~---gf~Cr-Cg~~FC~~HRy 146 (179)
..++|..|...+|++ |..|+ |-+--|..-|-
T Consensus 24 ~~r~CarC~~~LG~l~~~g~~C~~Ck~rVC~~Crv 58 (76)
T 2csz_A 24 SDRTCARCQESLGRLSPKTNTCRGCNHLVCRDCRI 58 (76)
T ss_dssp CCCBCSSSCCBCSSSCTTTSEETTTTEECCTTSEE
T ss_pred CccchhhhCccccccccCCCcCcccChhhcccccc
Confidence 468999999999996 78998 97777776553
No 122
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=22.70 E-value=74 Score=20.35 Aligned_cols=27 Identities=26% Similarity=0.474 Sum_probs=17.8
Q ss_pred CCCccccccccccc--ceeeecCCccccC
Q 030300 117 PSRCSSCKKRVGLT--GFKCRCGNLYCVS 143 (179)
Q Consensus 117 ~~rC~~C~kkvgl~--gf~CrCg~~FC~~ 143 (179)
...|..|...+... ...-.||++||..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~fc~~ 43 (78)
T 2ect_A 15 GLECPVCKEDYALGESVRQLPCNHLFHDS 43 (78)
T ss_dssp SCCCTTTTSCCCTTSCEEECTTSCEEETT
T ss_pred CCCCeeCCccccCCCCEEEeCCCCeecHH
Confidence 46799997765432 2333599999864
No 123
>1e0f_I Haemadin, factor IIA; coagulation//heparin-B, coagulation/crystal structure/heparin-binding site/ hirudin/thrombin inhibitor; 3.1A {Haemadipsa sylvestris} SCOP: g.3.15.2
Probab=22.26 E-value=43 Score=21.87 Aligned_cols=30 Identities=27% Similarity=0.730 Sum_probs=22.0
Q ss_pred cccceeeecCCccccCCCCCCCCCCcccch
Q 030300 128 GLTGFKCRCGNLYCVSHRYSDKHNCPFDYR 157 (179)
Q Consensus 128 gl~gf~CrCg~~FC~~HRy~e~H~C~fDyk 157 (179)
|-.||.|.||...|-.-.--....|+-|-|
T Consensus 13 gevgytcdcgekiclygqscndgqcsgdpk 42 (57)
T 1e0f_I 13 GEVGYTCDCGEKICLYGQSCNDGQCSGDPK 42 (57)
T ss_dssp SSCSSCEECSSSEECTTCCBSSSCBCSCCC
T ss_pred CceeeeccCCceeeEecccccCCcccCCCC
Confidence 445889999988887666666677776654
No 124
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.20 E-value=21 Score=24.22 Aligned_cols=24 Identities=33% Similarity=0.901 Sum_probs=10.6
Q ss_pred CcccccccccccceeeecCCcccc
Q 030300 119 RCSSCKKRVGLTGFKCRCGNLYCV 142 (179)
Q Consensus 119 rC~~C~kkvgl~gf~CrCg~~FC~ 142 (179)
+|..|++.|....|.=+=|.+||.
T Consensus 44 ~C~~C~~~L~~~~~~~~~g~~yC~ 67 (91)
T 2d8y_A 44 RCSYCNNKLSLGTYASLHGRIYCK 67 (91)
T ss_dssp BCTTTCCBCCTTTCCCSSSCCCCH
T ss_pred eeCCCCCCCCCCCcEeECCEEECH
Confidence 444555554443343333444443
No 125
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.08 E-value=50 Score=20.62 Aligned_cols=26 Identities=23% Similarity=0.618 Sum_probs=17.9
Q ss_pred CCCcccccccccccceeeecCCccccC
Q 030300 117 PSRCSSCKKRVGLTGFKCRCGNLYCVS 143 (179)
Q Consensus 117 ~~rC~~C~kkvgl~gf~CrCg~~FC~~ 143 (179)
...|..|...+.- ...-.||++||..
T Consensus 15 ~~~C~IC~~~~~~-p~~~~CgH~fC~~ 40 (66)
T 2ecy_A 15 KYKCEKCHLVLCS-PKQTECGHRFCES 40 (66)
T ss_dssp CEECTTTCCEESS-CCCCSSSCCCCHH
T ss_pred CCCCCCCChHhcC-eeECCCCCHHHHH
Confidence 4679999765432 3445899999963
No 126
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=22.07 E-value=22 Score=25.21 Aligned_cols=12 Identities=25% Similarity=0.808 Sum_probs=9.9
Q ss_pred ccceeeecCCcc
Q 030300 129 LTGFKCRCGNLY 140 (179)
Q Consensus 129 l~gf~CrCg~~F 140 (179)
..-+.||||..|
T Consensus 28 ~y~y~CrCGd~F 39 (83)
T 1wge_A 28 TYFYPCPCGDNF 39 (83)
T ss_dssp EEEECCSSSSCE
T ss_pred EEEEeCCCCCEE
Confidence 456889999988
No 127
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=22.07 E-value=26 Score=17.13 Aligned_cols=11 Identities=27% Similarity=0.845 Sum_probs=6.3
Q ss_pred eeee-cCCcccc
Q 030300 132 FKCR-CGNLYCV 142 (179)
Q Consensus 132 f~Cr-Cg~~FC~ 142 (179)
|.|. ||..|-.
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 1rik_A 3 FACPECPKRFMR 14 (29)
T ss_dssp EECSSSSCEESC
T ss_pred ccCCCCCchhCC
Confidence 5565 6666643
No 128
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.05 E-value=35 Score=17.97 Aligned_cols=11 Identities=27% Similarity=0.866 Sum_probs=6.4
Q ss_pred ceeee-cCCccc
Q 030300 131 GFKCR-CGNLYC 141 (179)
Q Consensus 131 gf~Cr-Cg~~FC 141 (179)
.|.|. ||..|-
T Consensus 9 ~~~C~~C~k~f~ 20 (37)
T 2elp_A 9 AMKCPYCDFYFM 20 (37)
T ss_dssp CEECSSSSCEEC
T ss_pred CeECCCCChhhc
Confidence 46666 666564
No 129
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=22.01 E-value=30 Score=23.54 Aligned_cols=11 Identities=18% Similarity=0.604 Sum_probs=7.5
Q ss_pred CCCcccccccc
Q 030300 117 PSRCSSCKKRV 127 (179)
Q Consensus 117 ~~rC~~C~kkv 127 (179)
+-.|..|.|..
T Consensus 34 ~~~C~~C~k~F 44 (96)
T 2ctd_A 34 SVSCPTCQAVG 44 (96)
T ss_dssp CEECTTTCSCE
T ss_pred CcCCCCCCCCc
Confidence 45677777765
No 130
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.96 E-value=35 Score=17.68 Aligned_cols=10 Identities=30% Similarity=0.823 Sum_probs=4.9
Q ss_pred ceeee-cCCcc
Q 030300 131 GFKCR-CGNLY 140 (179)
Q Consensus 131 gf~Cr-Cg~~F 140 (179)
.|.|. ||..|
T Consensus 9 ~~~C~~C~k~f 19 (36)
T 2elt_A 9 PYKCPQCSYAS 19 (36)
T ss_dssp SEECSSSSCEE
T ss_pred CCCCCCCCccc
Confidence 35554 55444
No 131
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.93 E-value=59 Score=21.40 Aligned_cols=24 Identities=25% Similarity=0.764 Sum_probs=19.9
Q ss_pred CCCcccccccccccceeee-cCCccccC
Q 030300 117 PSRCSSCKKRVGLTGFKCR-CGNLYCVS 143 (179)
Q Consensus 117 ~~rC~~C~kkvgl~gf~Cr-Cg~~FC~~ 143 (179)
...|..|+. ..-|+|- |+..||++
T Consensus 12 ~~~C~vC~~---~~kY~CPrC~~~yCSl 36 (56)
T 2yqq_A 12 TVVCVICLE---KPKYRCPACRVPYCSV 36 (56)
T ss_dssp CCCCTTTCS---CCSEECTTTCCEESSH
T ss_pred CCccCcCcC---CCeeeCCCCCCCeeCH
Confidence 457999987 5679997 99999985
No 132
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=27.02 E-value=20 Score=17.74 Aligned_cols=12 Identities=25% Similarity=0.891 Sum_probs=7.5
Q ss_pred eeee-cCCccccC
Q 030300 132 FKCR-CGNLYCVS 143 (179)
Q Consensus 132 f~Cr-Cg~~FC~~ 143 (179)
|.|. ||..|-..
T Consensus 3 ~~C~~C~k~f~~~ 15 (29)
T 2lvt_A 3 CQCVMCGKAFTQA 15 (29)
Confidence 5666 77777543
No 133
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=21.27 E-value=34 Score=23.75 Aligned_cols=30 Identities=17% Similarity=0.501 Sum_probs=21.4
Q ss_pred CCCCCCcccccc-ccccc--c-eeee-cCCccccC
Q 030300 114 KEGPSRCSSCKK-RVGLT--G-FKCR-CGNLYCVS 143 (179)
Q Consensus 114 ~~~~~rC~~C~k-kvgl~--g-f~Cr-Cg~~FC~~ 143 (179)
+..+-.|..|.| +|.-. | -.|+ |+.+|=+-
T Consensus 24 q~~ky~C~fCgk~~vkR~a~GIW~C~~C~~~~AGG 58 (73)
T 1ffk_W 24 HKKKYKCPVCGFPKLKRASTSIWVCGHCGYKIAGG 58 (73)
T ss_pred cccCccCCCCCCceeEEEEeEEEECCCCCcEEECC
Confidence 456789999997 33222 3 8899 99998764
No 134
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=20.62 E-value=32 Score=26.04 Aligned_cols=31 Identities=19% Similarity=0.544 Sum_probs=22.4
Q ss_pred CCCCCCcccccc----cccccceeee-cCCccccCC
Q 030300 114 KEGPSRCSSCKK----RVGLTGFKCR-CGNLYCVSH 144 (179)
Q Consensus 114 ~~~~~rC~~C~k----kvgl~gf~Cr-Cg~~FC~~H 144 (179)
+..+..|..|++ |++.--.+|+ ||.+|-+-=
T Consensus 57 q~akytCPfCGk~~vKR~avGIW~C~~Cgk~fAGGA 92 (116)
T 3cc2_Z 57 MNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFTGGS 92 (116)
T ss_dssp HHSCEECSSSCCEEEEEEETTEEEETTTCCEEECCS
T ss_pred hccCCcCCCCCCceeEecCceeEECCCCCCEEECCC
Confidence 345688999998 3332248999 999998763
No 135
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=20.59 E-value=34 Score=23.91 Aligned_cols=25 Identities=16% Similarity=0.449 Sum_probs=17.1
Q ss_pred CCCcccccccccccceeeecCCcccc
Q 030300 117 PSRCSSCKKRVGLTGFKCRCGNLYCV 142 (179)
Q Consensus 117 ~~rC~~C~kkvgl~gf~CrCg~~FC~ 142 (179)
.-.|..|...+.- ...-.||++||.
T Consensus 15 ~~~C~iC~~~~~~-p~~~~CgH~fC~ 39 (115)
T 3l11_A 15 ECQCGICMEILVE-PVTLPCNHTLCK 39 (115)
T ss_dssp HHBCTTTCSBCSS-CEECTTSCEECH
T ss_pred CCCCccCCcccCc-eeEcCCCCHHhH
Confidence 3579999865432 333479999995
No 136
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.52 E-value=81 Score=19.72 Aligned_cols=24 Identities=17% Similarity=0.524 Sum_probs=17.9
Q ss_pred CCCcccccccccccceeeecCCcccc
Q 030300 117 PSRCSSCKKRVGLTGFKCRCGNLYCV 142 (179)
Q Consensus 117 ~~rC~~C~kkvgl~gf~CrCg~~FC~ 142 (179)
...|..|...+.. ..-.||++||.
T Consensus 15 ~~~C~IC~~~~~~--~~~~CgH~fc~ 38 (70)
T 2ecn_A 15 EEECCICMDGRAD--LILPCAHSFCQ 38 (70)
T ss_dssp CCCCSSSCCSCCS--EEETTTEEECH
T ss_pred CCCCeeCCcCccC--cccCCCCcccH
Confidence 4679999876554 55569999985
No 137
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.40 E-value=35 Score=17.86 Aligned_cols=11 Identities=18% Similarity=0.742 Sum_probs=5.9
Q ss_pred ceeee-cCCccc
Q 030300 131 GFKCR-CGNLYC 141 (179)
Q Consensus 131 gf~Cr-Cg~~FC 141 (179)
.|.|. ||..|-
T Consensus 9 ~~~C~~C~k~f~ 20 (36)
T 2elv_A 9 LYDCHICERKFK 20 (36)
T ss_dssp CEECSSSCCEES
T ss_pred CeECCCCCCccC
Confidence 45565 555553
No 138
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.14 E-value=37 Score=18.12 Aligned_cols=11 Identities=18% Similarity=0.410 Sum_probs=6.8
Q ss_pred ceeee-cCCccc
Q 030300 131 GFKCR-CGNLYC 141 (179)
Q Consensus 131 gf~Cr-Cg~~FC 141 (179)
.|+|. ||..|-
T Consensus 9 ~~~C~~C~k~f~ 20 (37)
T 2elm_A 9 LYYCSQCHYSSI 20 (37)
T ss_dssp EEECSSSSCEEE
T ss_pred CeECCCCCcccC
Confidence 46666 666664
Done!