BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>030307
MASYAPLFVNANDRRWKPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSS
IVASAISWEDSENAKSYLRIKVVNLGSSSVNLKVSVDGLGPNSIKLSGSTKTQLTSTNLK
DENSFMEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVSMKMEGTDSFSRSSI

High Scoring Gene Products

Symbol, full name Information P value
ASD1
alpha-L-arabinofuranosidase 1
protein from Arabidopsis thaliana 1.3e-45
ASD2
alpha-L-arabinofuranosidase 2
protein from Arabidopsis thaliana 1.2e-36
abfA
Probable alpha-N-arabinofuranosidase A
protein from Aspergillus terreus NIH2624 0.00063

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030307
        (179 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2103172 - symbol:ASD1 "alpha-L-arabinofuranosi...   479  1.3e-45   1
TAIR|locus:2180652 - symbol:ASD2 "alpha-L-arabinofuranosi...   400  1.2e-36   1
UNIPROTKB|Q0CTV2 - symbol:abfA "Probable alpha-N-arabinof...   106  0.00063   1


>TAIR|locus:2103172 [details] [associations]
            symbol:ASD1 "alpha-L-arabinofuranosidase 1" species:3702
            "Arabidopsis thaliana" [GO:0005576 "extracellular region"
            evidence=ISM] [GO:0016798 "hydrolase activity, acting on glycosyl
            bonds" evidence=ISS] [GO:0046373 "L-arabinose metabolic process"
            evidence=IEA] [GO:0046556 "alpha-N-arabinofuranosidase activity"
            evidence=IEA;IDA] [GO:0009044 "xylan 1,4-beta-xylosidase activity"
            evidence=IDA] [GO:0045493 "xylan catabolic process" evidence=IDA]
            [GO:0005773 "vacuole" evidence=IDA] [GO:0009505 "plant-type cell
            wall" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
            [GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
            [GO:0045492 "xylan biosynthetic process" evidence=RCA]
            InterPro:IPR010720 Pfam:PF06964 SMART:SM00813 GO:GO:0005773
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045493
            InterPro:IPR017853 SUPFAM:SSF51445 GO:GO:0048046 GO:GO:0005578
            EMBL:AC011708 CAZy:GH51 GO:GO:0046556 GO:GO:0046373 eggNOG:COG3534
            HOGENOM:HOG000115340 KO:K01209 GO:GO:0009505 EMBL:AY243509
            EMBL:AF372949 EMBL:AY143944 EMBL:AK222175 EMBL:AK220766
            IPI:IPI00526411 RefSeq:NP_187685.1 UniGene:At.20271
            ProteinModelPortal:Q9SG80 SMR:Q9SG80 STRING:Q9SG80 PaxDb:Q9SG80
            PRIDE:Q9SG80 EnsemblPlants:AT3G10740.1 GeneID:820243
            KEGG:ath:AT3G10740 TAIR:At3g10740 InParanoid:Q9SG80 OMA:LEYLGIG
            PhylomeDB:Q9SG80 ProtClustDB:CLSN2684036 Genevestigator:Q9SG80
            GO:GO:0009044 Uniprot:Q9SG80
        Length = 678

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 96/175 (54%), Positives = 119/175 (68%)

Query:     1 MASYAPLFVNANDRRWKPDAIVFNSAQLYGTPSYWVQQFFREXXXXXXXXXXXXXXXXXX 60
             MASYAPLFVN NDRRW PDAIVFNS+ LYGTPSYWVQ+FF E                  
Sbjct:   500 MASYAPLFVNTNDRRWNPDAIVFNSSHLYGTPSYWVQRFFAESSGATLLTSTLKGNSTSL 559

Query:    61 XXXXXXXWEDSENAKSYLRIKVVNLGSSSVNLKVSVDGLGPNSIKLSGSTKTQLTSTNLK 120
                    W++  N K Y+RIK VN G++S N++V V GL PN +++SGS KT LTSTN+ 
Sbjct:   560 VASAIS-WKN--NGKDYIRIKAVNFGANSENMQVLVTGLDPNVMRVSGSKKTVLTSTNVM 616

Query:   121 DENSFMEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDLLRESVSMKMEGTDSFS 175
             DENSF +P KVVP  +LLE A +DM VV+ P+SF+SFDLL+ES  ++M  +DS S
Sbjct:   617 DENSFSQPEKVVPHESLLELAEEDMTVVLPPHSFSSFDLLKESAKIRMPISDSSS 671


>TAIR|locus:2180652 [details] [associations]
            symbol:ASD2 "alpha-L-arabinofuranosidase 2" species:3702
            "Arabidopsis thaliana" [GO:0005576 "extracellular region"
            evidence=ISM] [GO:0016798 "hydrolase activity, acting on glycosyl
            bonds" evidence=ISS] [GO:0046373 "L-arabinose metabolic process"
            evidence=IEA] [GO:0046556 "alpha-N-arabinofuranosidase activity"
            evidence=IEA] InterPro:IPR010720 Pfam:PF06964 SMART:SM00813
            EMBL:CP002688 GenomeReviews:BA000015_GR InterPro:IPR017853
            SUPFAM:SSF51445 GO:GO:0005578 CAZy:GH51 GO:GO:0046556 GO:GO:0046373
            eggNOG:COG3534 HOGENOM:HOG000115340 InterPro:IPR008979
            SUPFAM:SSF49785 ProtClustDB:CLSN2684036 EMBL:AY243510 EMBL:AF149413
            EMBL:AY063925 EMBL:BT006062 IPI:IPI00517686 RefSeq:NP_197984.2
            UniGene:At.27144 ProteinModelPortal:Q8VZR2 SMR:Q8VZR2 STRING:Q8VZR2
            PaxDb:Q8VZR2 PRIDE:Q8VZR2 EnsemblPlants:AT5G26120.1 GeneID:832681
            KEGG:ath:AT5G26120 TAIR:At5g26120 InParanoid:Q8VZR2 OMA:GISHNDQ
            PhylomeDB:Q8VZR2 Genevestigator:Q8VZR2 Uniprot:Q8VZR2
        Length = 674

 Score = 400 (145.9 bits), Expect = 1.2e-36, P = 1.2e-36
 Identities = 88/180 (48%), Positives = 107/180 (59%)

Query:     1 MASYAPLFVNANDRRWKPDAIVFNSAQLYGTPSYWVQQFFREXXXXXXXXXXXXXXXXXX 60
             M SYAPLFVN NDRRW PDAIVFNS+ LYGTPSYWVQ FF E                  
Sbjct:   499 MVSYAPLFVNTNDRRWIPDAIVFNSSHLYGTPSYWVQHFFTESSGATLLNSTLKGKTSSV 558

Query:    61 XXXXXXXWEDSENAKSYLRIKVVNLGSSSVNLKVSVDGLGPNSIKLSGSTKTQLTSTNLK 120
                         N K Y++IK VN G  SVNLKV+V GL     K  GS K  LTS ++ 
Sbjct:   559 EASAISF---QTNGKDYIQIKAVNFGEQSVNLKVAVTGL---MAKFYGSKKKVLTSASVM 612

Query:   121 DENSFMEPNKVVPSLTLLE-NAAKDMDVVISPYSFTSFDLLRESVSM-KMEGTDSFSRSS 178
             DENSF  PN +VP  +LLE    +D+  V+ P+SF+SFDLL ES ++ KM  +DS+ ++S
Sbjct:   613 DENSFSNPNMIVPQESLLEMTEQEDLMFVLPPHSFSSFDLLTESENVIKMPISDSYKKTS 672


>UNIPROTKB|Q0CTV2 [details] [associations]
            symbol:abfA "Probable alpha-N-arabinofuranosidase A"
            species:341663 "Aspergillus terreus NIH2624" [GO:0005576
            "extracellular region" evidence=ISS] [GO:0019566 "arabinose
            metabolic process" evidence=ISS] [GO:0046556
            "alpha-N-arabinofuranosidase activity" evidence=ISS]
            InterPro:IPR010720 Pfam:PF06964 SMART:SM00813 UniPathway:UPA00667
            GO:GO:0005576 InterPro:IPR017853 SUPFAM:SSF51445 GO:GO:0046556
            GO:GO:0031222 GO:GO:0019566 GO:GO:0046373 eggNOG:COG3534
            HOGENOM:HOG000115340 OrthoDB:EOG4Z0FDW EMBL:CH476597
            RefSeq:XP_001212060.1 ProteinModelPortal:Q0CTV2
            EnsemblFungi:CADATEAT00009779 GeneID:4317643 Uniprot:Q0CTV2
        Length = 628

 Score = 106 (42.4 bits), Expect = 0.00063, P = 0.00063
 Identities = 35/132 (26%), Positives = 56/132 (42%)

Query:     1 MASYAPLFVNANDRRWKPDAIVF--NSAQLYGTPSYWVQQFFREXXXXXXXXXXXXXXXX 58
             MA+YAPL    N  +W PD I F  N   +  + SY+VQQ F                  
Sbjct:   482 MAAYAPLLQLVNSTQWTPDLISFTQNPNMVIDSTSYYVQQMF------SVNRGDTIKEVT 535

Query:    59 XXXXXXXXXWEDSENAKSYLRIKVVNLGSSSVNLKVSVDGLGPNSIKLSGSTKTQLTSTN 118
                      W  S +  SY  +K+ N G+ +  + VS+ G+  +S KL+    +   + N
Sbjct:   536 SDSAFGPVYWVASSSGSSYY-VKLANYGADTQEVSVSIPGM--SSGKLTVLADSDPEAYN 592

Query:   119 LKDENSFMEPNK 130
               D  + + P++
Sbjct:   593 -SDTQTLVTPSE 603


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.127   0.358    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      179       154   0.00088  105 3  11 23  0.40    32
                                                     30  0.41    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  547 (58 KB)
  Total size of DFA:  131 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.59u 0.10s 13.69t   Elapsed:  00:00:00
  Total cpu time:  13.59u 0.10s 13.69t   Elapsed:  00:00:00
  Start:  Fri May 10 19:15:18 2013   End:  Fri May 10 19:15:18 2013

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