BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030310
(179 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SLQ8|PSBP_CUCSA Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis
sativus GN=PSBP PE=2 SV=1
Length = 263
Score = 293 bits (749), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 145/178 (81%), Positives = 158/178 (88%), Gaps = 3/178 (1%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQRHVSNIK-PTQIVCRAQKQA-VQEDDGSAVSRRLAL 58
MAST CFLHHHAL T AR+SSS R + K P +VCRAQKQ QE++G VSRRLAL
Sbjct: 1 MASTSCFLHHHAL-TAAARSSSSPRQAALPKSPQLLVCRAQKQQPAQEEEGGVVSRRLAL 59
Query: 59 TVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREF 118
TVLIGAAA+GSKVSPADAAYGE+ANVFGKPK+NTD+LPY+GDGFKLSIPSKWNPSKEREF
Sbjct: 60 TVLIGAAALGSKVSPADAAYGEAANVFGKPKSNTDYLPYSGDGFKLSIPSKWNPSKEREF 119
Query: 119 PGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSE 176
PGQVLRYEDNFDSNSN+SVII PTDKKSI D+GSPEEFLSKVDYLLGKQAY GKT+SE
Sbjct: 120 PGQVLRYEDNFDSNSNLSVIINPTDKKSIKDFGSPEEFLSKVDYLLGKQAYFGKTASE 177
>sp|Q7DM39|PSBP1_TOBAC Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Nicotiana
tabacum GN=PSBP1 PE=3 SV=2
Length = 268
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/182 (79%), Positives = 163/182 (89%), Gaps = 6/182 (3%)
Query: 1 MASTQCFLHHHALSTTPARTS---SSQRHVSNIKPTQIVCRAQKQAV-QEDDGSAV--SR 54
MASTQCFLH HALS++ ART+ SSQR+VS++KP Q+VCRAQKQ+ QEDDG++V SR
Sbjct: 1 MASTQCFLHQHALSSSAARTTSSVSSQRYVSSLKPNQLVCRAQKQSSPQEDDGNSVVVSR 60
Query: 55 RLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSK 114
RLALTVLIGAAA+GSKVSPADAAYGE+ANVFGKPK NTDFL YNGDGFKL +P+KWNPSK
Sbjct: 61 RLALTVLIGAAAIGSKVSPADAAYGEAANVFGKPKENTDFLAYNGDGFKLQVPAKWNPSK 120
Query: 115 EREFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTS 174
E EFPGQVLRYEDNFDS SN+ V +TPTDKKSITDYGSPEEFL++VD+LLGKQAY GKT
Sbjct: 121 EVEFPGQVLRYEDNFDSTSNLIVTVTPTDKKSITDYGSPEEFLTQVDFLLGKQAYFGKTD 180
Query: 175 SE 176
SE
Sbjct: 181 SE 182
>sp|P12302|PSBP_SPIOL Oxygen-evolving enhancer protein 2, chloroplastic OS=Spinacia
oleracea GN=PSBP PE=1 SV=1
Length = 267
Score = 282 bits (722), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 137/181 (75%), Positives = 158/181 (87%), Gaps = 5/181 (2%)
Query: 1 MASTQCFLHHHALSTTPA--RTSSSQRHVS-NIKPTQIVCRAQKQAVQEDD--GSAVSRR 55
MAST CFLHHHA ++PA R S++QR+ + +IKP QIVC+AQKQ E + S VSRR
Sbjct: 1 MASTACFLHHHAAISSPAAGRGSAAQRYQAVSIKPNQIVCKAQKQDDNEANVLNSGVSRR 60
Query: 56 LALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKE 115
LALTVLIGAAAVGSKVSPADAAYGE+ANVFGKPK NT+F+PYNGDGFKL +PSKWNPSKE
Sbjct: 61 LALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPSKE 120
Query: 116 REFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSS 175
+EFPGQVLRYEDNFD+ SN+SV++ PTDKKSITD+GSPE+FLS+VDYLLGKQAY GKT S
Sbjct: 121 KEFPGQVLRYEDNFDATSNLSVLVQPTDKKSITDFGSPEDFLSQVDYLLGKQAYFGKTDS 180
Query: 176 E 176
E
Sbjct: 181 E 181
>sp|P93566|PSBP_SOLTU Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum
tuberosum GN=PSBP PE=2 SV=1
Length = 260
Score = 282 bits (722), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 138/176 (78%), Positives = 152/176 (86%), Gaps = 5/176 (2%)
Query: 2 ASTQCFLH-HHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTV 60
ASTQCFLH +HAL ++PARTSS V + KP Q++CRAQKQ + +AVSRRLALT+
Sbjct: 3 ASTQCFLHQYHALRSSPARTSS----VPSPKPNQLICRAQKQDDANNTSNAVSRRLALTL 58
Query: 61 LIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPG 120
LIG AA+GSKVSPADAAYGE+ANVFGKPK NTDFLPYNGDGFKL IP+KWNPSKE EFPG
Sbjct: 59 LIGTAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQIPAKWNPSKEIEFPG 118
Query: 121 QVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSE 176
QVLRYEDNFDS SN+ V +TPTDKKSITDYGSPEEFLSKVDYLLGKQAY GKT SE
Sbjct: 119 QVLRYEDNFDSTSNLMVAVTPTDKKSITDYGSPEEFLSKVDYLLGKQAYFGKTDSE 174
>sp|P29795|PSBP_SOLLC Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum
lycopersicum GN=PSBP PE=2 SV=1
Length = 258
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/178 (78%), Positives = 154/178 (86%), Gaps = 11/178 (6%)
Query: 2 ASTQCFLH-HHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGS--AVSRRLAL 58
ASTQCFLH +HAL ++PARTSS VS+ KP Q++CRAQKQ DD S AVSRRLAL
Sbjct: 3 ASTQCFLHQYHALRSSPARTSS----VSSPKPNQLICRAQKQ----DDASNAAVSRRLAL 54
Query: 59 TVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREF 118
T+LIG AA+GSKVSPADAAYGE+ANVFGKPK NTDFLPYNGDGFKL +P+KWNPSKE E+
Sbjct: 55 TLLIGTAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQVPAKWNPSKEVEY 114
Query: 119 PGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSE 176
PGQVLRYEDNFDS SN+ V +TPTDKKSITDYGSPEEFLSKVDYLLGKQAY GKT SE
Sbjct: 115 PGQVLRYEDNFDSTSNLIVAVTPTDKKSITDYGSPEEFLSKVDYLLGKQAYFGKTDSE 172
>sp|P16059|PSBP_PEA Oxygen-evolving enhancer protein 2, chloroplastic OS=Pisum sativum
GN=PSBP PE=1 SV=1
Length = 259
Score = 280 bits (715), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 137/176 (77%), Positives = 149/176 (84%), Gaps = 3/176 (1%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTV 60
MASTQCFLHH TTP RT S QR V KP IVC+AQKQ D + VSRRLAL+V
Sbjct: 1 MASTQCFLHHQYAITTPTRTLS-QRQVVTTKPNHIVCKAQKQDDVVD--AVVSRRLALSV 57
Query: 61 LIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPG 120
LIGAAAVGSKVSPADAAYGE+ANVFGK KTNTD+LPYNGDGFKL +P+KWNPSKEREFPG
Sbjct: 58 LIGAAAVGSKVSPADAAYGEAANVFGKAKTNTDYLPYNGDGFKLLVPAKWNPSKEREFPG 117
Query: 121 QVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSE 176
QVLRYEDNFD+ SNVSV++ TDKKSITDYGSPEEFLSKVDYLLGKQA+ G+T SE
Sbjct: 118 QVLRYEDNFDATSNVSVLVQTTDKKSITDYGSPEEFLSKVDYLLGKQAFFGQTDSE 173
>sp|P18212|PSBP2_TOBAC Oxygen-evolving enhancer protein 2-2, chloroplastic OS=Nicotiana
tabacum GN=PSBP2 PE=1 SV=2
Length = 265
Score = 278 bits (711), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/180 (78%), Positives = 157/180 (87%), Gaps = 5/180 (2%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQKQ-AVQEDD--GSAVSRRL 56
MASTQCFLHHHALST PART + V ++KP Q+ VCRAQKQ A QED+ +VSRRL
Sbjct: 1 MASTQCFLHHHALST-PARTPLVRSIVPSLKPNQLLVCRAQKQSAPQEDNVNSVSVSRRL 59
Query: 57 ALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKER 116
ALTVLIGAAAVGSKVSPADAAYGE+ANVFGKPKT+TDF YNGDGFKL IPSKWNP+KE
Sbjct: 60 ALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEV 119
Query: 117 EFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSE 176
E+PGQVLR+EDNFD+ SNV V ITPTDKKSITD+GSPE+FLS+VDYLLG+QAYSGKT SE
Sbjct: 120 EYPGQVLRFEDNFDATSNVIVAITPTDKKSITDFGSPEQFLSQVDYLLGRQAYSGKTDSE 179
>sp|Q04127|PSBP3_TOBAC Oxygen-evolving enhancer protein 2-3, chloroplastic OS=Nicotiana
tabacum GN=PSBP3 PE=2 SV=1
Length = 266
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 137/181 (75%), Positives = 156/181 (86%), Gaps = 6/181 (3%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQKQ--AVQEDD--GSAVSRR 55
MASTQCFLHHHALST PARTS + V ++K Q+ VCRAQ + A Q+D+ +VSRR
Sbjct: 1 MASTQCFLHHHALST-PARTSLVRGIVPSLKSNQLLVCRAQNKQSAPQQDNVNSVSVSRR 59
Query: 56 LALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKE 115
LALT+LIGAAAVGSKVSPADAAYGE+ANVFGKPKT+TDF YNGDGFKL IPSKWNP+KE
Sbjct: 60 LALTLLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKE 119
Query: 116 REFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSS 175
E+PGQVLR+EDNFD+ SNV V ITPTDKKSITD+GSPE+FLS+VDYLLG+QAYSGKT S
Sbjct: 120 VEYPGQVLRFEDNFDATSNVIVAITPTDKKSITDFGSPEQFLSQVDYLLGRQAYSGKTDS 179
Query: 176 E 176
E
Sbjct: 180 E 180
>sp|O49080|PSBP_FRIAG Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria
agrestis GN=PSBP PE=2 SV=1
Length = 264
Score = 270 bits (690), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 133/179 (74%), Positives = 151/179 (84%), Gaps = 4/179 (2%)
Query: 1 MASTQCFLHHHALSTTPARTSS--SQRHVSNIKPTQIVCRAQKQA-VQEDDGSAVSRRLA 57
MAS+ CFL HHA ST PA TS S R V IKP+Q++CRAQK + E+ +AVSRRLA
Sbjct: 1 MASSACFLLHHAPST-PATTSRTPSHRLVPTIKPSQLICRAQKSSDTDENSSTAVSRRLA 59
Query: 58 LTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKERE 117
LT+LIG+AAVG+K++PA+AAYGE+ANVFGK KTNTDFLPY GDGF L IP+KWNPSKE E
Sbjct: 60 LTILIGSAAVGTKIAPANAAYGEAANVFGKAKTNTDFLPYTGDGFNLLIPAKWNPSKEVE 119
Query: 118 FPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSE 176
FPGQVLRYEDNFD SNVSV +TPT KKSITDYG+PEEFLS VDYLLGKQAYSGKT+SE
Sbjct: 120 FPGQVLRYEDNFDVTSNVSVTVTPTSKKSITDYGTPEEFLSTVDYLLGKQAYSGKTASE 178
>sp|Q42029|PSBP1_ARATH Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Arabidopsis
thaliana GN=PSBP1 PE=1 SV=2
Length = 263
Score = 268 bits (684), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/179 (74%), Positives = 159/179 (88%), Gaps = 5/179 (2%)
Query: 1 MASTQCFLHHHALSTTPARTSSS---QRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLA 57
MA + CFLH AL+++ AR+SSS QRHVS KP QI+C+AQ+ EDD SAVSRRLA
Sbjct: 1 MAYSACFLHQSALASSAARSSSSSSSQRHVSLSKPVQIICKAQQS--HEDDNSAVSRRLA 58
Query: 58 LTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKERE 117
LT+L+GAAAVGSKVSPADAAYGE+ANVFGKPKTNTDFLPYNGDGFK+ +P+KWNPSKE E
Sbjct: 59 LTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIE 118
Query: 118 FPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSE 176
+PGQVLR+EDNFD+ SN++V++TPTDKKSITDYGSPEEFLS+V+YLLGKQAY G+T+SE
Sbjct: 119 YPGQVLRFEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASE 177
>sp|P11594|PSBP_SINAL Oxygen-evolving enhancer protein 2, chloroplastic OS=Sinapis alba
GN=PSBP PE=2 SV=2
Length = 260
Score = 247 bits (630), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 122/179 (68%), Positives = 153/179 (85%), Gaps = 8/179 (4%)
Query: 1 MASTQCFLHHHALSTTPARTSSS---QRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLA 57
MA + CFLH AL+++ AR+S S QR+VS +++VC+AQ+ E+D S VSRRLA
Sbjct: 1 MAYSACFLHQSALASSTARSSPSSSSQRYVS---ISKLVCKAQQ--THEEDNSTVSRRLA 55
Query: 58 LTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKERE 117
LT+L+GAAAVGSKVSPADAAYGE+ANVFGKPK NTDF Y+GDGF++ +P+KWNPS+E E
Sbjct: 56 LTLLVGAAAVGSKVSPADAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSREVE 115
Query: 118 FPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSE 176
+PGQVLRYEDNFD+ SN++V++TPTDKKSITDYGSPEEFLS+V+YLLGKQAY G+T+SE
Sbjct: 116 YPGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASE 174
>sp|P85189|PSBP_HELAN Oxygen-evolving enhancer protein 2, chloroplastic OS=Helianthus
annuus GN=PSBP PE=1 SV=1
Length = 263
Score = 239 bits (609), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/182 (68%), Positives = 149/182 (81%), Gaps = 11/182 (6%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQ------RHVSNIKPTQIVCRAQKQAVQEDDGSAVSR 54
MA+ CF HALST PAR+SSS R + IKP Q++ R+QK+ + +A+SR
Sbjct: 1 MAAASCF---HALST-PARSSSSSLQSSSSRLPAPIKPNQLIIRSQKREETATNDAAISR 56
Query: 55 RLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSK 114
RLALTVLIGAAAVG+KVSPADAAYGE+ANVFGK K+ T+F Y G GFKLS+P+KWNPSK
Sbjct: 57 RLALTVLIGAAAVGTKVSPADAAYGEAANVFGKQKS-TEFSQYTGPGFKLSVPAKWNPSK 115
Query: 115 EREFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTS 174
E E+PGQVLRYEDNFD+ SN++V++TPTDKK+ITDYG+PEEFLSKVDYLLGKQAY GKT+
Sbjct: 116 EVEYPGQVLRYEDNFDTTSNLAVMVTPTDKKAITDYGAPEEFLSKVDYLLGKQAYFGKTA 175
Query: 175 SE 176
SE
Sbjct: 176 SE 177
>sp|Q40407|PSBP_NARPS Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus
pseudonarcissus GN=PSBP PE=2 SV=1
Length = 265
Score = 236 bits (602), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 120/186 (64%), Positives = 137/186 (73%), Gaps = 17/186 (9%)
Query: 1 MASTQCFLHHHA-------LSTTPA---RTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGS 50
MAST CFLHHHA LS T + R Q H + ++ + C + A+
Sbjct: 1 MASTACFLHHHAPSPATSNLSRTRSATNRDEQQQEHSARLQSPEADCATENDAL------ 54
Query: 51 AVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKW 110
+SRRLALT+LIG AA+GS+VS ADAAYGESANVFGKPKTNTDF GDGFK+ IPSKW
Sbjct: 55 -LSRRLALTILIGGAALGSRVSAADAAYGESANVFGKPKTNTDFQTVTGDGFKILIPSKW 113
Query: 111 NPSKEREFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYS 170
NPSKE EFPGQVLRYEDNFD+ SNV V++ PTDKKSI DYGSPE+FLS+VDYLLGKQAY
Sbjct: 114 NPSKEVEFPGQVLRYEDNFDTTSNVGVMVNPTDKKSIKDYGSPEQFLSQVDYLLGKQAYF 173
Query: 171 GKTSSE 176
GKT SE
Sbjct: 174 GKTISE 179
>sp|Q96334|PSBP_BRAJU Oxygen-evolving enhancer protein 2, chloroplastic (Fragment)
OS=Brassica juncea GN=PSBP PE=2 SV=1
Length = 217
Score = 225 bits (574), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 103/131 (78%), Positives = 121/131 (92%)
Query: 46 EDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLS 105
EDD S VSRRLALT+L+GAAAVGSKVSPADAAYGE+ANVFGKPKTNTDF NGDGF++
Sbjct: 1 EDDTSTVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFTAINGDGFQVQ 60
Query: 106 IPSKWNPSKEREFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLG 165
+P+KWNPS+E E+PGQVLRYEDNFD+ SN++V++TPTDKKSITDYGSPEEFLS+V+YLLG
Sbjct: 61 VPAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLG 120
Query: 166 KQAYSGKTSSE 176
KQAY G+T+ E
Sbjct: 121 KQAYFGETACE 131
>sp|Q00434|PSBP_WHEAT Oxygen-evolving enhancer protein 2, chloroplastic OS=Triticum
aestivum GN=PSBP PE=2 SV=1
Length = 258
Score = 195 bits (496), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/178 (64%), Positives = 137/178 (76%), Gaps = 7/178 (3%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQKQAVQEDDGSAV-SRRLAL 58
MAST CFLH + AR ++S R + TQ+ VC+AQK D + V SRR AL
Sbjct: 1 MASTSCFLHQ-----STARLAASARPAPAVGRTQLFVCKAQKNDEAASDAAVVTSRRAAL 55
Query: 59 TVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREF 118
++L GAAA+ KVSPA AAYGE+ANVFGK K NTDF+ Y+G+GFKL IP+KWNPSKEREF
Sbjct: 56 SLLAGAAAIAVKVSPAAAAYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREF 115
Query: 119 PGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSE 176
PGQVLRYEDNFD+ SN+SVII PT KK+ITDYGSPEEFLS+V +LLG+Q+Y GKT SE
Sbjct: 116 PGQVLRYEDNFDATSNLSVIINPTTKKTITDYGSPEEFLSQVGFLLGQQSYGGKTDSE 173
>sp|P11471|PSBP_CHLRE Oxygen-evolving enhancer protein 2, chloroplastic OS=Chlamydomonas
reinhardtii GN=PSBP PE=2 SV=1
Length = 245
Score = 154 bits (388), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 115/176 (65%), Gaps = 19/176 (10%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTV 60
MA+ C + A + P +S+R + +V RA GS VSRR AL
Sbjct: 1 MATALC---NKAFAAAPVARPASRR-------SAVVVRAS--------GSDVSRRAALAG 42
Query: 61 LIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPG 120
GAAA+ S SPA+AAYG+SANVFGK + F+PY GDGF L +P+KWNPSKE +FPG
Sbjct: 43 FAGAAALVSS-SPANAAYGDSANVFGKVTNKSGFVPYAGDGFALLLPAKWNPSKENDFPG 101
Query: 121 QVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSE 176
+LRYEDNFD+ +N+ VI TDKK+I D+GS ++FL V YLLGKQAYSG+T SE
Sbjct: 102 VILRYEDNFDAVNNLVVIAQDTDKKAIADFGSQDKFLESVSYLLGKQAYSGETQSE 157
>sp|O49344|PSBP2_ARATH Putative oxygen-evolving enhancer protein 2-2 OS=Arabidopsis
thaliana GN=PSBP2 PE=5 SV=3
Length = 125
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/39 (82%), Positives = 38/39 (97%)
Query: 138 IITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSE 176
+ITPTDKKSITDYGSPE+FLS+V+YLLGKQAY G+T+SE
Sbjct: 1 MITPTDKKSITDYGSPEQFLSQVNYLLGKQAYVGETASE 39
>sp|P83687|PSBP_EUGGR Oxygen-evolving enhancer protein 2 (Fragment) OS=Euglena gracilis
GN=PSBP PE=1 SV=1
Length = 30
Score = 34.7 bits (78), Expect = 0.34, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 77 AYGESANVFGKPKTNTDFLPYNGDGF 102
AYGE ANVFGK K F +GDG+
Sbjct: 1 AYGEGANVFGKRKETDQFFEISGDGW 26
>sp|P82538|PPL1_ARATH PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=PPL1
PE=1 SV=1
Length = 230
Score = 33.5 bits (75), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 98 NGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEE 155
N D + P W +E GQ Y+D + +VSV + PT K++I ++G P++
Sbjct: 87 NKDAYAFLYPFGW---QEVVIEGQDKVYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQ 141
>sp|Q8VY52|PPD2_ARATH PsbP domain-containing protein 2, chloroplastic OS=Arabidopsis
thaliana GN=PPD2 PE=1 SV=1
Length = 232
Score = 33.1 bits (74), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 100 DGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPE 154
+GF L IPS + + E G +E+ + ++N+ V+++P KS+ +GSP+
Sbjct: 83 NGFTLLIPSSYT---KVEKAGANALFEELNNGSNNIGVVVSPVRIKSLDQFGSPQ 134
>sp|Q8TYT7|PYRG_METKA CTP synthase OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM
9639 / NBRC 100938) GN=pyrG PE=3 SV=1
Length = 535
Score = 33.1 bits (74), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 9 HHHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLAL 58
H H L T P + S + I+P IVCR ++ DDG V R++AL
Sbjct: 182 HVHELKTKPTQHSVKELRSLGIQPDAIVCRCERPL---DDG--VKRKIAL 226
>sp|Q73IW9|RPOBC_WOLPM Bifunctional DNA-directed RNA polymerase subunit beta-beta'
OS=Wolbachia pipientis wMel GN=rpoBC PE=3 SV=1
Length = 2837
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 8 LHHHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAV 67
L+HH T ++ R + ++ P +I+ R +K+ +QE S T++ A AV
Sbjct: 1697 LNHHY--RTIINRNNRLRKLLSLNPPEIMIRNEKRMLQEAVDSLFDNSRRNTLVNKAGAV 1754
Query: 68 GSKVSPADAAYGESA----NVFGK 87
G K S +D G+ N+ GK
Sbjct: 1755 GYKKSISDMLKGKQGRFRQNLLGK 1778
>sp|P80660|PSBP1_PHYPA Oxygen-evolving enhancer protein 2 (Fragments) OS=Physcomitrella
patens subsp. patens PE=1 SV=1
Length = 43
Score = 30.4 bits (67), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 12/52 (23%)
Query: 89 KTNTDFLPYNGDGFKLSIP---SKWNPSKEREFPGQVLRYEDNFDSNSNVSV 137
K T F P+ G+GF L +P +++ P + + EDNFD+ +N+ V
Sbjct: 1 KKQTGFTPFIGNGFSLDVPXSITEYGPXE---------KXEDNFDATNNLFV 43
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.127 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,544,547
Number of Sequences: 539616
Number of extensions: 2746363
Number of successful extensions: 4625
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 4575
Number of HSP's gapped (non-prelim): 33
length of query: 179
length of database: 191,569,459
effective HSP length: 110
effective length of query: 69
effective length of database: 132,211,699
effective search space: 9122607231
effective search space used: 9122607231
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)