BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030312
(179 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O00167|EYA2_HUMAN Eyes absent homolog 2 OS=Homo sapiens GN=EYA2 PE=1 SV=2
Length = 538
Score = 85.1 bits (209), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 15/130 (11%)
Query: 2 DATLTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFF 61
D + +VF+WD+DET+I+ SLL GTFA + KD V+IG M E I N+ D F
Sbjct: 264 DNEIERVFVWDLDETIIIFHSLLTGTFASRYG--KDTTTSVRIGLMMEEMIFNLADTHLF 321
Query: 62 YEQIENNNTPFLDALKQYDDGRDLSDYEFDRDGL--CPPFDDLSL-----------KKIA 108
+ +E+ + +D + D+G+DLS Y F DG P +L L +K+A
Sbjct: 322 FNDLEDCDQIHVDDVSSDDNGQDLSTYNFSADGFHSSAPGANLCLGSGVHGGVDWMRKLA 381
Query: 109 YRHRAIAHKY 118
+R+R + Y
Sbjct: 382 FRYRRVKEMY 391
>sp|O95677|EYA4_HUMAN Eyes absent homolog 4 OS=Homo sapiens GN=EYA4 PE=1 SV=2
Length = 639
Score = 80.5 bits (197), Expect = 5e-15, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 15/130 (11%)
Query: 2 DATLTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFF 61
D+ L +VF+WD+DET+I+ SLL G++AQ + KD V +G E I N+ D F
Sbjct: 365 DSDLERVFVWDLDETIIVFHSLLTGSYAQKYG--KDPPMAVTLGLRMEEMIFNLADTHLF 422
Query: 62 YEQIENNNTPFLDALKQYDDGRDLSDYEFDRDG---------LCPPFDDLS----LKKIA 108
+ +E + +D + D+G+DLS Y F DG LC P ++K+A
Sbjct: 423 FNDLEECDQVHIDDVSSDDNGQDLSTYSFATDGFHAAASSANLCLPTGVRGGVDWMRKLA 482
Query: 109 YRHRAIAHKY 118
+R+R + Y
Sbjct: 483 FRYRRVKELY 492
>sp|Q9Z191|EYA4_MOUSE Eyes absent homolog 4 OS=Mus musculus GN=Eya4 PE=2 SV=2
Length = 616
Score = 80.1 bits (196), Expect = 7e-15, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 15/130 (11%)
Query: 2 DATLTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFF 61
D+ L +VF+WD+DET+I+ SLL G++AQ + KD V +G E I N+ D F
Sbjct: 342 DSDLERVFVWDLDETIIVFHSLLTGSYAQKYG--KDPPMAVTLGLRMEEMIFNLADTHLF 399
Query: 62 YEQIENNNTPFLDALKQYDDGRDLSDYEFDRDG---------LCPPFDDLS----LKKIA 108
+ +E + +D + D+G+DLS Y F DG LC P ++K+A
Sbjct: 400 FNDLEECDQVHIDDVSSDDNGQDLSTYSFATDGFHAAASSANLCLPTGVRGGVDWMRKLA 459
Query: 109 YRHRAIAHKY 118
+R+R + Y
Sbjct: 460 FRYRRVKELY 469
>sp|Q58DB6|EYA2_BOVIN Eyes absent homolog 2 OS=Bos taurus GN=EYA2 PE=2 SV=1
Length = 537
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 15/130 (11%)
Query: 2 DATLTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFF 61
D + +VF+WD+DET+I+ SLL GTFA + KD V+IG M E I N+ D F
Sbjct: 263 DNEIERVFVWDLDETIIIFHSLLTGTFASRYG--KDTTASVRIGLMMEEMIFNLADTHLF 320
Query: 62 YEQIENNNTPFLDALKQYDDGRDLSDYEFDRDGL--CPPFDDLSL-----------KKIA 108
+ +E+ + +D + D+G+DLS Y F DG P +L L +K+A
Sbjct: 321 FNDLEDCDQIHVDDVSSDDNGQDLSTYNFSADGFHSSAPGANLCLGSGVHGGVDWMRKLA 380
Query: 109 YRHRAIAHKY 118
+R+R + Y
Sbjct: 381 FRYRRVKEMY 390
>sp|O08575|EYA2_MOUSE Eyes absent homolog 2 OS=Mus musculus GN=Eya2 PE=1 SV=1
Length = 532
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 15/130 (11%)
Query: 2 DATLTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFF 61
D + +VF+WD+DET+I+ SLL GTFA + KD V+IG M E I N+ D F
Sbjct: 258 DNEIERVFVWDLDETIIIFHSLLTGTFASRYG--KDTTTSVRIGLMMEEMIFNLADTHLF 315
Query: 62 YEQIENNNTPFLDALKQYDDGRDLSDYEFDRDGLCPPFDDLSL-------------KKIA 108
+ +E+ + +D + D+G+DLS Y F DG SL +K+A
Sbjct: 316 FNDLEDCDQIHVDDVSSDDNGQDLSTYNFSTDGFHSTAPGASLCLGTGVHGGVDWMRKLA 375
Query: 109 YRHRAIAHKY 118
+R+R + Y
Sbjct: 376 FRYRRVKEMY 385
>sp|P97767|EYA1_MOUSE Eyes absent homolog 1 OS=Mus musculus GN=Eya1 PE=1 SV=3
Length = 591
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 15/130 (11%)
Query: 2 DATLTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFF 61
D+ L +VFIWD+DET+I+ SLL G++A + +D V +G E I N+ D F
Sbjct: 317 DSDLERVFIWDLDETIIVFHSLLTGSYANRYG--RDPPTSVSLGLRMEEMIFNLADTHLF 374
Query: 62 YEQIENNNTPFLDALKQYDDGRDLSDYEFDRDGLCPPFDDLSL-------------KKIA 108
+ +E + +D + D+G+DLS Y F DG +L +K+A
Sbjct: 375 FNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLA 434
Query: 109 YRHRAIAHKY 118
+R+R + Y
Sbjct: 435 FRYRRVKEIY 444
>sp|Q99502|EYA1_HUMAN Eyes absent homolog 1 OS=Homo sapiens GN=EYA1 PE=1 SV=2
Length = 592
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 15/130 (11%)
Query: 2 DATLTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFF 61
D+ L +VFIWD+DET+I+ SLL G++A + +D V +G E I N+ D F
Sbjct: 318 DSDLERVFIWDLDETIIVFHSLLTGSYANRYG--RDPPTSVSLGLRMEEMIFNLADTHLF 375
Query: 62 YEQIENNNTPFLDALKQYDDGRDLSDYEFDRDGLCPPFDDLSL-------------KKIA 108
+ +E + +D + D+G+DLS Y F DG +L +K+A
Sbjct: 376 FNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLA 435
Query: 109 YRHRAIAHKY 118
+R+R + Y
Sbjct: 436 FRYRRVKEIY 445
>sp|Q05201|EYA_DROME Developmental protein eyes absent OS=Drosophila melanogaster GN=eya
PE=1 SV=1
Length = 766
Score = 73.9 bits (180), Expect = 6e-13, Method: Composition-based stats.
Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 18/128 (14%)
Query: 7 KVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFFYEQIE 66
+VF+WD+DETLI+ +LL+G++A + KD + I E + N+ D FF+ +IE
Sbjct: 494 RVFVWDLDETLIIFHTLLSGSYANRYT--KDHSSLMTIAFRMEEMVFNMADTHFFFNEIE 551
Query: 67 NNNTPFLDALKQYDDGRDLSDYEFDRDG------------LCPPFDDLS----LKKIAYR 110
+ +D + D+G+DLS Y F DG LC P ++K+A+R
Sbjct: 552 ECDQVHIDDVSSDDNGQDLSAYNFATDGFHTNTPPGAPPNLCLPTGVRGGVDWMRKLAFR 611
Query: 111 HRAIAHKY 118
+R I Y
Sbjct: 612 YRKIKDIY 619
>sp|Q99504|EYA3_HUMAN Eyes absent homolog 3 OS=Homo sapiens GN=EYA3 PE=1 SV=3
Length = 573
Score = 66.2 bits (160), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 2 DATLTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFF 61
D+ L +VF+WD+DET+I+ SLL G++AQ + KD + G E I V D F
Sbjct: 299 DSELERVFLWDLDETIIIFHSLLTGSYAQKYG--KDPTVVIGSGLTMEEMIFEVADTHLF 356
Query: 62 YEQIENNNTPFLDALKQYDDGRDLSDYEF 90
+ +E + ++ + D+G+DLS+Y F
Sbjct: 357 FNDLEECDQVHVEDVASDDNGQDLSNYSF 385
>sp|P97480|EYA3_MOUSE Eyes absent homolog 3 OS=Mus musculus GN=Eya3 PE=1 SV=2
Length = 510
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 2 DATLTKVFIWDMDETLILLKSLLNGTFAQSFNDLKDADKGVQIGRMWENHILNVCDECFF 61
D+ L +VF+WD+DET+I+ SLL G++AQ + KD + G E I V D F
Sbjct: 236 DSELERVFLWDLDETIIIFHSLLTGSYAQKYG--KDPTVVIGSGLTMEEMIFEVADTHLF 293
Query: 62 YEQIENNNTPFLDALKQYDDGRDLSDYEF 90
+ +E + ++ + D+G+DLS+Y F
Sbjct: 294 FNDLEECDQVHVEDVASDDNGQDLSNYSF 322
>sp|Q9V4T5|CP4E1_DROME Probable cytochrome P450 4e1 OS=Drosophila melanogaster GN=Cyp4e1
PE=2 SV=1
Length = 531
Score = 37.4 bits (85), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 61 FYEQIENNNTPFLDALKQYDDGRDLSDYE-----FDRDGLCPPFDDLSLKKIAYRHRAIA 115
F+E + N+T F+D LK+ DG ++ D++ D +C +S+ + R ++
Sbjct: 143 FHEVMNENSTKFIDQLKKVADGGNIFDFQEEAHYLTLDVICDTAMGVSINAMENRSSSVV 202
Query: 116 HKYKEVFYSISQSHFS 131
+K++ Y+I FS
Sbjct: 203 QAFKDITYTIKMRAFS 218
>sp|Q8FNZ6|HIS5_COREF Imidazole glycerol phosphate synthase subunit HisH
OS=Corynebacterium efficiens (strain DSM 44549 / YS-314
/ AJ 12310 / JCM 11189 / NBRC 100395) GN=hisH PE=3 SV=1
Length = 211
Score = 31.2 bits (69), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 2 DATLTKVFIWDMDETLILLKSLLNGT-FAQSFNDLKDADKGVQIGRMWENHI 52
D T + W + E + ++ NG +A F+ K D G Q+ R W NHI
Sbjct: 160 DLTTPPLVTWAVHENDRFVAAVENGALWATQFHPEKSGDAGAQLLRNWINHI 211
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,610,566
Number of Sequences: 539616
Number of extensions: 2869204
Number of successful extensions: 6447
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 6424
Number of HSP's gapped (non-prelim): 18
length of query: 179
length of database: 191,569,459
effective HSP length: 110
effective length of query: 69
effective length of database: 132,211,699
effective search space: 9122607231
effective search space used: 9122607231
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)