Query 030315
Match_columns 179
No_of_seqs 120 out of 285
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 19:14:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030315.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030315hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i7n_A Pantothenate kinase 1; 100.0 5E-39 1.7E-43 284.0 6.1 148 19-177 1-186 (360)
2 2ews_A Pantothenate kinase; PA 99.8 2.6E-21 9E-26 166.2 9.2 105 16-175 15-119 (287)
3 1hux_A Activator of (R)-2-hydr 97.1 0.003 1E-07 52.5 9.7 88 22-142 4-94 (270)
4 4ehu_A Activator of 2-hydroxyi 96.9 0.0073 2.5E-07 49.4 10.0 85 22-142 2-91 (276)
5 3epq_A Putative fructokinase; 94.7 0.75 2.6E-05 38.3 13.2 95 21-142 3-118 (302)
6 2e2o_A Hexokinase; acetate and 92.5 0.73 2.5E-05 37.6 9.2 91 23-139 4-104 (299)
7 2gup_A ROK family protein; sug 92.4 2.3 7.9E-05 34.5 12.1 92 21-140 4-113 (292)
8 3vgl_A Glucokinase; ROK family 91.9 1.6 5.4E-05 36.3 10.7 32 111-142 86-117 (321)
9 2qm1_A Glucokinase; alpha-beta 91.9 3 0.0001 34.1 12.3 31 112-142 99-129 (326)
10 2aa4_A Mannac kinase, putative 91.5 3.7 0.00013 33.1 12.4 93 23-141 3-116 (289)
11 4htl_A Beta-glucoside kinase; 91.3 2.6 8.8E-05 34.7 11.3 102 21-142 4-118 (297)
12 3djc_A Type III pantothenate k 90.7 0.61 2.1E-05 38.9 6.9 42 22-83 3-47 (266)
13 3bex_A Type III pantothenate k 90.5 0.48 1.6E-05 38.9 6.0 44 21-83 3-49 (249)
14 1zbs_A Hypothetical protein PG 90.2 3.1 0.0001 34.0 10.7 94 23-138 2-105 (291)
15 2ch5_A NAGK protein; transfera 90.0 3.2 0.00011 34.3 10.8 92 23-137 8-117 (347)
16 1sz2_A Glucokinase, glucose ki 89.9 1.6 5.6E-05 36.4 9.0 105 18-141 11-122 (332)
17 4apw_A ALP12; actin-like prote 89.9 0.75 2.6E-05 38.8 6.9 44 100-143 279-323 (329)
18 4db3_A Glcnac kinase, N-acetyl 89.7 4.8 0.00016 33.5 11.8 102 22-142 25-141 (327)
19 3vov_A Glucokinase, hexokinase 89.6 4.5 0.00015 33.3 11.4 32 111-142 88-119 (302)
20 1z05_A Transcriptional regulat 89.6 3.3 0.00011 35.9 11.0 32 111-142 198-229 (429)
21 3h1q_A Ethanolamine utilizatio 89.1 1.7 5.9E-05 34.6 8.2 39 101-139 228-269 (272)
22 2hoe_A N-acetylglucosamine kin 88.9 3.7 0.00012 34.9 10.6 30 112-141 179-208 (380)
23 1z6r_A MLC protein; transcript 86.9 12 0.00043 31.7 12.8 32 111-142 176-207 (406)
24 2yhx_A Hexokinase B; transfera 86.3 1.3 4.6E-05 39.6 6.5 22 18-39 58-79 (457)
25 2yhw_A Bifunctional UDP-N-acet 85.8 6.7 0.00023 32.5 10.3 31 111-141 121-151 (343)
26 2h3g_X Biosynthetic protein; p 84.8 2.3 7.8E-05 35.3 6.8 41 22-82 1-45 (268)
27 3lm2_A Putative kinase; struct 83.3 2 6.9E-05 34.7 5.7 22 117-138 87-108 (226)
28 1cza_N Hexokinase type I; stru 83.0 1.6 5.5E-05 42.3 5.8 22 18-39 75-96 (917)
29 3r8e_A Hypothetical sugar kina 81.2 18 0.00062 29.7 11.0 32 111-142 107-139 (321)
30 1bdg_A Hexokinase; phosphotran 80.0 3.2 0.00011 36.9 6.3 22 18-39 65-86 (451)
31 1woq_A Inorganic polyphosphate 79.2 6.5 0.00022 31.5 7.5 105 19-142 10-135 (267)
32 1saz_A Probable butyrate kinas 78.5 10 0.00036 32.4 8.9 17 23-39 4-20 (381)
33 2zgy_A Plasmid segregation pro 78.0 3.5 0.00012 34.1 5.6 41 100-140 273-317 (320)
34 2ap1_A Putative regulator prot 76.6 7.1 0.00024 32.1 7.1 97 22-141 25-140 (327)
35 2q2r_A Glucokinase 1, putative 76.0 2.8 9.5E-05 35.6 4.5 31 112-142 118-149 (373)
36 3o8m_A Hexokinase; rnaseh-like 73.9 5.1 0.00017 36.2 5.8 22 18-39 77-98 (485)
37 2w40_A Glycerol kinase, putati 73.7 8 0.00027 34.2 7.1 17 23-39 6-22 (503)
38 2itm_A Xylulose kinase, xylulo 73.4 7.9 0.00027 34.0 6.9 17 23-39 2-18 (484)
39 1zxo_A Conserved hypothetical 71.9 3.5 0.00012 33.6 4.0 27 112-138 75-103 (291)
40 2dpn_A Glycerol kinase; thermu 70.4 10 0.00035 33.4 6.9 17 23-39 4-20 (495)
41 3js6_A Uncharacterized PARM pr 70.3 4.3 0.00015 34.7 4.3 41 101-144 292-336 (355)
42 1zc6_A Probable N-acetylglucos 69.9 11 0.00037 30.7 6.6 18 22-39 12-29 (305)
43 3cet_A Conserved archaeal prot 69.1 5.3 0.00018 34.6 4.6 84 22-156 1-94 (334)
44 2zf5_O Glycerol kinase; hypert 68.6 12 0.0004 33.1 6.9 17 23-39 5-21 (497)
45 2fsj_A Hypothetical protein TA 68.6 2.5 8.5E-05 35.8 2.4 44 100-143 297-343 (346)
46 3htv_A D-allose kinase, alloki 68.3 5.1 0.00018 33.2 4.3 27 111-137 97-123 (310)
47 3qfu_A 78 kDa glucose-regulate 67.7 13 0.00044 31.0 6.7 43 100-142 344-390 (394)
48 4gni_A Putative heat shock pro 66.2 9 0.00031 32.5 5.5 44 100-143 345-399 (409)
49 2ych_A Competence protein PILM 66.1 6.7 0.00023 32.8 4.6 34 100-133 307-342 (377)
50 3h6e_A Carbohydrate kinase, FG 64.7 15 0.00053 32.6 6.9 17 23-39 8-24 (482)
51 1jce_A ROD shape-determining p 64.4 4.9 0.00017 33.2 3.4 43 101-143 279-324 (344)
52 2d4w_A Glycerol kinase; alpha 64.1 16 0.00055 32.3 6.9 17 23-39 4-20 (504)
53 3ll3_A Gluconate kinase; xylul 61.1 11 0.00038 33.4 5.3 17 23-39 6-22 (504)
54 2ivn_A O-sialoglycoprotein end 60.9 65 0.0022 26.8 9.8 40 101-140 70-117 (330)
55 1dkg_D Molecular chaperone DNA 60.6 23 0.00079 29.4 7.0 42 100-141 334-378 (383)
56 3h1q_A Ethanolamine utilizatio 60.0 60 0.002 25.4 10.0 19 21-39 28-46 (272)
57 3i33_A Heat shock-related 70 k 59.5 23 0.0008 29.7 6.8 43 100-142 352-398 (404)
58 3mcp_A Glucokinase; structural 58.6 11 0.00039 32.3 4.8 103 19-141 7-128 (366)
59 3ifr_A Carbohydrate kinase, FG 57.7 7.9 0.00027 34.4 3.7 18 22-39 8-25 (508)
60 1nu0_A Hypothetical protein YQ 57.4 48 0.0016 24.6 7.6 94 22-141 4-107 (138)
61 4e1j_A Glycerol kinase; struct 57.2 25 0.00085 31.3 6.9 17 23-39 28-44 (520)
62 3jvp_A Ribulokinase; PSI-II, N 57.1 17 0.00059 32.7 5.9 43 100-142 440-485 (572)
63 2uyt_A Rhamnulokinase; rhamnos 53.9 7.8 0.00027 34.0 3.0 18 23-40 6-23 (489)
64 3l0q_A Xylulose kinase; xlylul 53.0 33 0.0011 30.6 7.1 18 22-39 6-23 (554)
65 3hz6_A Xylulokinase; xylulose, 53.0 32 0.0011 30.4 6.9 18 22-39 6-23 (511)
66 2p3r_A Glycerol kinase; glycer 52.1 18 0.00062 32.1 5.1 18 22-39 4-21 (510)
67 3g25_A Glycerol kinase; IDP007 51.5 19 0.00065 31.8 5.1 18 22-39 7-24 (501)
68 1k1e_A Deoxy-D-mannose-octulos 51.4 52 0.0018 24.1 7.0 100 19-156 6-109 (180)
69 3h3n_X Glycerol kinase; ATP-bi 51.1 21 0.0007 31.6 5.3 18 22-39 6-23 (506)
70 2fpr_A Histidine biosynthesis 50.7 23 0.00078 26.3 4.8 18 18-35 11-28 (176)
71 2zf5_O Glycerol kinase; hypert 50.7 14 0.00049 32.5 4.2 43 100-142 394-438 (497)
72 3djc_A Type III pantothenate k 49.6 24 0.00081 29.1 5.1 42 100-148 218-259 (266)
73 3hm8_A Hexokinase-3; glucose, 48.9 16 0.00053 32.7 4.1 22 18-39 56-77 (445)
74 1v8d_A Hypothetical protein (T 48.5 5.6 0.00019 32.7 1.1 12 23-34 168-179 (235)
75 1cza_N Hexokinase type I; stru 48.4 16 0.00055 35.3 4.4 22 18-39 523-544 (917)
76 2itm_A Xylulose kinase, xylulo 48.4 22 0.00077 31.0 5.1 42 101-142 388-432 (484)
77 2h3g_X Biosynthetic protein; p 48.0 28 0.00096 28.6 5.3 39 100-144 214-252 (268)
78 2zgy_A Plasmid segregation pro 47.7 21 0.0007 29.3 4.5 16 22-37 1-16 (320)
79 3jvp_A Ribulokinase; PSI-II, N 46.7 14 0.00048 33.3 3.5 18 22-39 6-23 (572)
80 3l0q_A Xylulose kinase; xlylul 45.8 32 0.0011 30.7 5.8 43 100-142 443-487 (554)
81 1vhx_A Putative holliday junct 45.5 92 0.0031 23.2 9.4 87 22-142 4-110 (150)
82 2r8e_A 3-deoxy-D-manno-octulos 44.4 92 0.0031 23.0 7.5 100 19-156 24-127 (188)
83 3i8b_A Xylulose kinase; strain 43.0 43 0.0015 29.8 6.2 44 100-143 425-470 (515)
84 3qfu_A 78 kDa glucose-regulate 41.6 16 0.00055 30.3 2.9 20 21-40 18-37 (394)
85 3i8b_A Xylulose kinase; strain 41.3 16 0.00054 32.6 3.0 18 22-39 6-23 (515)
86 3ezw_A Glycerol kinase; glycer 41.2 41 0.0014 29.8 5.7 43 100-142 403-447 (526)
87 3bex_A Type III pantothenate k 40.1 28 0.00096 28.1 4.1 37 100-143 211-247 (249)
88 3ifr_A Carbohydrate kinase, FG 38.7 53 0.0018 29.0 6.0 44 100-143 401-446 (508)
89 3ll3_A Gluconate kinase; xylul 35.7 62 0.0021 28.5 5.9 44 100-143 394-439 (504)
90 3ezw_A Glycerol kinase; glycer 34.0 28 0.00096 30.9 3.4 18 22-39 5-22 (526)
91 4a2a_A Cell division protein F 33.5 44 0.0015 28.9 4.5 29 101-129 330-360 (419)
92 2v7y_A Chaperone protein DNAK; 33.1 78 0.0027 27.8 6.1 43 100-142 303-348 (509)
93 4e1j_A Glycerol kinase; struct 32.3 67 0.0023 28.5 5.6 44 100-143 426-471 (520)
94 3e8m_A Acylneuraminate cytidyl 31.9 1.3E+02 0.0045 21.1 7.1 99 20-156 3-105 (164)
95 2dpn_A Glycerol kinase; thermu 31.0 42 0.0014 29.4 4.0 42 101-142 400-443 (495)
96 3i33_A Heat shock-related 70 k 30.7 33 0.0011 28.7 3.2 21 20-40 22-42 (404)
97 2ych_A Competence protein PILM 30.6 33 0.0011 28.4 3.1 18 22-39 14-31 (377)
98 4gni_A Putative heat shock pro 30.4 30 0.001 29.2 2.8 18 21-38 13-30 (409)
99 1hux_A Activator of (R)-2-hydr 30.2 61 0.0021 26.1 4.6 44 101-144 210-256 (270)
100 1uvq_C Orexin; immunology, MHC 30.1 31 0.0011 19.5 1.9 19 15-33 7-25 (33)
101 1yuw_A Heat shock cognate 71 k 29.7 1E+02 0.0035 27.5 6.4 44 100-143 331-378 (554)
102 4ex6_A ALNB; modified rossman 29.5 17 0.00058 27.1 1.0 24 11-34 9-32 (237)
103 3ewi_A N-acylneuraminate cytid 29.1 1.1E+02 0.0038 22.8 5.6 98 18-156 6-109 (168)
104 4bc3_A Xylulose kinase; transf 28.3 42 0.0014 29.9 3.5 19 21-39 10-28 (538)
105 1jce_A ROD shape-determining p 28.2 36 0.0012 27.9 2.9 16 22-37 4-19 (344)
106 2nrh_A Transcriptional activat 27.7 28 0.00097 27.9 2.1 43 101-150 169-211 (219)
107 2d4w_A Glycerol kinase; alpha 27.7 60 0.0021 28.5 4.4 42 101-142 405-448 (504)
108 2w40_A Glycerol kinase, putati 27.6 51 0.0018 28.9 4.0 42 101-142 409-452 (503)
109 1b93_A Protein (methylglyoxal 27.6 1.2E+02 0.0042 22.9 5.6 54 60-129 11-64 (152)
110 3hi0_A Putative exopolyphospha 26.2 1.9E+02 0.0065 25.6 7.5 86 22-120 141-226 (508)
111 3kc2_A Uncharacterized protein 26.1 1E+02 0.0034 26.1 5.4 40 72-126 33-75 (352)
112 3h3n_X Glycerol kinase; ATP-bi 25.5 65 0.0022 28.4 4.2 43 100-142 404-448 (506)
113 3umc_A Haloacid dehalogenase; 25.0 29 0.00098 26.0 1.6 15 20-34 21-35 (254)
114 3g25_A Glycerol kinase; IDP007 24.4 71 0.0024 28.0 4.2 44 100-143 405-450 (501)
115 2p9j_A Hypothetical protein AQ 24.3 1.8E+02 0.0063 20.2 6.8 98 21-156 9-110 (162)
116 1iv0_A Hypothetical protein; r 24.2 1.8E+02 0.0061 20.1 7.3 22 109-131 73-94 (98)
117 3mdq_A Exopolyphosphatase; str 23.6 2.9E+02 0.01 22.7 7.8 19 21-39 131-149 (315)
118 2p3r_A Glycerol kinase; glycer 23.6 74 0.0025 28.0 4.2 43 100-142 402-446 (510)
119 4b9q_A Chaperone protein DNAK; 23.5 1.4E+02 0.0048 26.9 6.2 43 100-142 334-379 (605)
120 1dkg_D Molecular chaperone DNA 23.4 43 0.0015 27.7 2.5 18 22-39 3-20 (383)
121 3d2f_A Heat shock protein homo 22.7 1.2E+02 0.0042 27.9 5.7 45 100-144 335-382 (675)
122 2k6g_A Replication factor C su 22.5 1.3E+02 0.0045 21.2 4.7 70 59-136 34-106 (109)
123 2hx1_A Predicted sugar phospha 22.4 2.5E+02 0.0085 21.6 6.8 15 20-34 13-27 (284)
124 4bc3_A Xylulose kinase; transf 21.8 80 0.0027 28.1 4.1 42 101-142 436-479 (538)
125 2gmw_A D,D-heptose 1,7-bisphos 21.7 1.3E+02 0.0044 22.5 4.8 25 71-110 53-77 (211)
126 2kho_A Heat shock protein 70; 21.6 1.2E+02 0.0042 27.4 5.3 43 100-142 334-379 (605)
127 2ebu_A Replication factor C su 21.2 1.7E+02 0.0058 20.9 5.1 55 73-135 39-95 (112)
128 2v7y_A Chaperone protein DNAK; 21.2 63 0.0021 28.4 3.3 19 22-40 3-21 (509)
129 4a2a_A Cell division protein F 20.7 48 0.0017 28.7 2.4 20 22-41 9-28 (419)
130 3qbx_A Anhydro-N-acetylmuramic 20.6 60 0.002 28.3 2.9 32 100-131 284-318 (371)
131 3hz6_A Xylulokinase; xylulose, 20.5 95 0.0032 27.4 4.3 43 101-143 404-449 (511)
132 3qxg_A Inorganic pyrophosphata 20.4 36 0.0012 25.6 1.3 15 20-34 23-37 (243)
133 2fxu_A Alpha-actin-1, actin, a 20.1 63 0.0022 27.0 2.9 20 19-38 3-22 (375)
No 1
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=100.00 E-value=5e-39 Score=284.04 Aligned_cols=148 Identities=26% Similarity=0.377 Sum_probs=103.8
Q ss_pred CCCCeEEEecCCceeEEEEEeecCCCCC-------CC-------------CCCCCCCC---------CCCCCeEEEEEee
Q 030315 19 SQISHLALDIGGSLIKVVYFLRSNGSGG-------SV-------------DDSGKKSD---------PVLEGRLHFAKFE 69 (179)
Q Consensus 19 ~~~~~~aiDIGGTL~KlVYf~~~~~~~~-------~~-------------~~~g~~~~---------~~~~G~LhF~kFe 69 (179)
+++|||||||||||+|||||+|.+...+ +. .++|.++. ..++|+|||++||
T Consensus 1 ~~~~~~~iDiGGtL~Klvy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~F~~f~ 80 (360)
T 2i7n_A 1 PPFPWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLELKNLTMCGRKGNLHFIRFP 80 (360)
T ss_dssp --CCEEEEEECSSEEEEEEEEECC------------CCSHHHHHHHCSBCSSSCEECGGGCEEEEEC--CEEEEEEEEEE
T ss_pred CCCCEEEEEeCCceEEEEEEeecCCccccccccccccccchhhccccccccccCccccccccccccccCcCceEEEEEee
Confidence 4689999999999999999999753111 00 11344442 2346999999999
Q ss_pred ccCHHHHHHHHHhhhhhcccccccCCCCCCceEEEEecCchHhhHHHHHHHhCCCcceeehhhHHHHhHHHHH---HhcC
Q 030315 70 TSKIIDCLEFIRSKNLHLAGFRHHDASASDKTLIKATGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLL---KFIK 146 (179)
Q Consensus 70 T~~i~~~i~fik~~~l~~~~~~~~~~~~~~~~~i~aTGGGA~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL---~~i~ 146 (179)
|++|++|++|++++++.. ...+|+||||||+||.+.|++++|+++.++|||+|+++|++||+ .++|
T Consensus 81 t~~~~~~l~~~~~~~~~~-----------~~~~i~aTGgGa~k~~~~~~~~~g~~~~k~dE~~c~~~G~~~l~~~~~~~~ 149 (360)
T 2i7n_A 81 SCAMHRFIQMGSEKNFSS-----------LHTTLCATGGGAFKFEEDFRMIADLQLHKLDELDCLIQGLLYVDSVGFNGK 149 (360)
T ss_dssp GGGHHHHHHHC-----------------------CEESTTTTGGGTTC-------CCBCCHHHHHHHHHHHHHHHCBTTB
T ss_pred hhhHHHHHHHHHHcCCCc-----------cCcEEEEECCcHHHHHHHHHHHhCCCcceecHHHHHHHHHHHHhcccccCC
Confidence 999999999998876542 23679999999999999999999999999999999999999999 4789
Q ss_pred CccEEEecCCcccee------cccCcchhhHhhhhhh
Q 030315 147 KLLLMWMVRRNLCRL------TRMIYTLIFLLILALV 177 (179)
Q Consensus 147 ~E~Fty~~~~~~~~~------~~~~yp~~~~ni~~~~ 177 (179)
.|+|||+++.+..++ .+++||||||||||-|
T Consensus 150 ~e~~t~~~~~~~~~~~~~~~~~~~~~PyllVnIGsGv 186 (360)
T 2i7n_A 150 PECYYFENPTNPELCQKKPYCLDNPYPMLLVNMGSGV 186 (360)
T ss_dssp CSEEEEESTTCTTTCEEEEECCSSCCSEEEEEESSSE
T ss_pred ceeEEeccccccccccccccccccCCceEEEEeCCCc
Confidence 999999986653332 3678999999999854
No 2
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=99.84 E-value=2.6e-21 Score=166.15 Aligned_cols=105 Identities=23% Similarity=0.272 Sum_probs=87.1
Q ss_pred CCCCCCCeEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCCeEEEEEeeccCHHHHHHHHHhhhhhcccccccCC
Q 030315 16 ESESQISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSKIIDCLEFIRSKNLHLAGFRHHDA 95 (179)
Q Consensus 16 ~~~~~~~~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G~LhF~kFeT~~i~~~i~fik~~~l~~~~~~~~~~ 95 (179)
|+.....++|||||||++|+||++ +++++|.+|++..++++++|++..
T Consensus 15 ~~~~~~~~iGIDiGsTt~K~V~~~--------------------~~~i~~~~~~~~~~~~~l~~l~~~------------ 62 (287)
T 2ews_A 15 VPRGSHMKVGIDAGGTLIKIVQEQ--------------------DNQRTFKTELTKNIDQVVEWLNQQ------------ 62 (287)
T ss_dssp ------CEEEEEECSSEEEEEEEC--------------------SSCEEEEEEEGGGHHHHHHHHHTS------------
T ss_pred ccCCCCeEEEEEEChhhEEEEEEc--------------------CCEEEEEEechHHHHHHHHHhccc------------
Confidence 335678999999999999999975 468999999999999999998321
Q ss_pred CCCCceEEEEecCchHhhHHHHHHHhCCCcceeehhhHHHHhHHHHHHhcCCccEEEecCCccceecccCcchhhHhhhh
Q 030315 96 SASDKTLIKATGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKFIKKLLLMWMVRRNLCRLTRMIYTLIFLLILA 175 (179)
Q Consensus 96 ~~~~~~~i~aTGGGA~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL~~i~~E~Fty~~~~~~~~~~~~~yp~~~~ni~~ 175 (179)
+..+|++||||++++.+ .+|++..+++||+|+++|+.||...++ .++|||++||||+
T Consensus 63 ---~~~~i~~TG~G~~~~~~----~l~~~~~~v~Ei~~~~~Ga~~l~~~~~----------------~~~~~~~vIdIGg 119 (287)
T 2ews_A 63 ---QIEKLCLTGGNAGVIAE----NINIPAQIFVEFDAASQGLGILLKEQG----------------HDLADYIFANVGT 119 (287)
T ss_dssp ---CCSEEEEESTTHHHHHT----TSSSCCEECCHHHHHHHHHHHHHHHTT----------------CCCSCEEEEEESS
T ss_pred ---CceEEEEEChhHHhHhH----hhCCCcceeehhHHHHHHHHHhcccCC----------------CCcCCeEEEEeCC
Confidence 13679999999999987 578999999999999999999998765 4788999999986
No 3
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=97.10 E-value=0.003 Score=52.50 Aligned_cols=88 Identities=16% Similarity=0.195 Sum_probs=52.5
Q ss_pred CeEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCCeEEEE-Eeecc--CHHHHHHHHHhhhhhcccccccCCCCC
Q 030315 22 SHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFA-KFETS--KIIDCLEFIRSKNLHLAGFRHHDASAS 98 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G~LhF~-kFeT~--~i~~~i~fik~~~l~~~~~~~~~~~~~ 98 (179)
..+|||+|||.+|+|-+. ..|++-+. +.+|. -.+.+.+.+++...... . ..
T Consensus 4 ~~lGiD~Gst~~k~~l~d-------------------~~g~i~~~~~~~~~~~~~~~~~~~l~~l~~~~~--~-----~~ 57 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILK-------------------DGKEIVAKSLVAVGTGTSGPARSISEVLENAHM--K-----KE 57 (270)
T ss_dssp EEEEEEECSSEEEEEEEE-------------------TTTEEEEEEEEECCSSCCHHHHHHHHHHHHHTC--C-----GG
T ss_pred EEEEEEeccceEEEEEEe-------------------CCCCEEEEEEecCCCCHHHHHHHHHHHHHHcCC--C-----hh
Confidence 479999999999999977 34554443 33432 12333333333210000 0 00
Q ss_pred CceEEEEecCchHhhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 99 DKTLIKATGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 99 ~~~~i~aTGGGA~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
....+.+||-|..-.. . + ....++|..|..+|..++.
T Consensus 58 ~i~~i~~TG~g~~~~~----~-~--~~~~v~Ei~ah~~ga~~~~ 94 (270)
T 1hux_A 58 DMAFTLATGYGRNSLE----G-I--ADKQMSELSCHAMGASFIW 94 (270)
T ss_dssp GCSEEEEESTTTTTTT----T-T--CSEEECHHHHHHHHHHHHC
T ss_pred HEEEEEEeCccccchh----h-c--CCCCcccHHHHHHHHHHhC
Confidence 1357899997754332 1 2 3355999999999998876
No 4
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=96.86 E-value=0.0073 Score=49.38 Aligned_cols=85 Identities=22% Similarity=0.241 Sum_probs=54.9
Q ss_pred CeEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCCeEEEEEeeccC--H---HHHHHHHHhhhhhcccccccCCC
Q 030315 22 SHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSK--I---IDCLEFIRSKNLHLAGFRHHDAS 96 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G~LhF~kFeT~~--i---~~~i~fik~~~l~~~~~~~~~~~ 96 (179)
..+|||+|+|.+|+|.+. .++++.+..+.++- . .+.++-+.+.....
T Consensus 2 ~~lGID~GsT~tk~av~d-------------------~~~~il~~~~~~~g~~~e~a~~vl~~~~~~a~~~--------- 53 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILK-------------------NGEDIVASETISSGTGTTGPSRVLEKLYGKTGLA--------- 53 (276)
T ss_dssp EEEEEEECSSCEEEEEEE-------------------TTTEEEEEEEESCCTTSSHHHHHHHHHHHHHCCC---------
T ss_pred eEEEEEcCccEEEEEEEE-------------------CCCeEEEEEEecCCCCHHHHHHHHHHHHHHCCCc---------
Confidence 468999999999999977 56666666655431 1 23333332221000
Q ss_pred CCCceEEEEecCchHhhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 97 ASDKTLIKATGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 97 ~~~~~~i~aTGGGA~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
......+.+||||.. .++..+..+.|+.|.+.|..++.
T Consensus 54 ~~~~~~~a~t~~~~~--------a~~~~~~~Vne~~aha~a~~~~~ 91 (276)
T 4ehu_A 54 REDIKKVVVTGYGRM--------NYSDADKQISELSCHARGVNFII 91 (276)
T ss_dssp GGGEEEEEEESTTGG--------GCCSCSEECCHHHHHHHHHHHHS
T ss_pred chhccccccCchHHH--------HhhCCCcccchHHHHHHHHHHhC
Confidence 012456788888864 23456778999999999998764
No 5
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=94.68 E-value=0.75 Score=38.34 Aligned_cols=95 Identities=12% Similarity=0.127 Sum_probs=62.3
Q ss_pred CCeEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCCeEEEEEeeccCHHHHHHHHHhhhhhcccccccCCCCCCc
Q 030315 21 ISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSKIIDCLEFIRSKNLHLAGFRHHDASASDK 100 (179)
Q Consensus 21 ~~~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G~LhF~kFeT~~i~~~i~fik~~~l~~~~~~~~~~~~~~~ 100 (179)
...+|||||||-+|++-+.. .+..+.-.+++|..-+++++-+.+.... ... ..
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~------------------~G~il~~~~~~t~~~~~~l~~i~~~~~~-~~i--------~g 55 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGRE------------------DGTIIDRIEFPTXMPDETIEXVIQYFSQ-FSL--------QA 55 (302)
T ss_dssp CCEEEEEECSSEEEEEEECT------------------TSCEEEEEEEECCCHHHHHHHHHHHHTT-SCC--------SE
T ss_pred cEEEEEEECcceeEEEEEEC------------------CCcEEEEEEecCCChHHHHHHHHHHhcc-CCc--------eE
Confidence 35789999999999998651 2334566778887767766655443210 000 01
Q ss_pred eEEEEec-----------C----------chHhhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 101 TLIKATG-----------G----------GAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 101 ~~i~aTG-----------G----------GA~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
.-|.+.| | --+...+.|++++++++..+....|...|-.++-
T Consensus 56 igi~~pG~vd~~~~~~~~G~i~~~~~~~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~G 118 (302)
T 3epq_A 56 IGIGSFGPVDNDXTSQTYGTITATPXAGWRHYPFLQTVXNEMXIPVGFSTDVNAAALGEFLFG 118 (302)
T ss_dssp EEEEECSSEECCTTSTTTTEECCCSSTTTBTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHS
T ss_pred EEEEeceeeccccccccccEEecCCCCCccCCChHHHHHHHhCCCEEEechhHHHHHHHHHhC
Confidence 1122211 1 1145678999999999999999999999877763
No 6
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=92.49 E-value=0.73 Score=37.65 Aligned_cols=91 Identities=15% Similarity=0.123 Sum_probs=57.0
Q ss_pred eEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCCe-EEEEEeecc-----CHHHHHHHHHhhhhhcccccccCCC
Q 030315 23 HLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGR-LHFAKFETS-----KIIDCLEFIRSKNLHLAGFRHHDAS 96 (179)
Q Consensus 23 ~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G~-LhF~kFeT~-----~i~~~i~fik~~~l~~~~~~~~~~~ 96 (179)
.+|||||||-+|++-+. ..|+ +.-.++++. ..+++++.+.+...... .. .
T Consensus 4 ~lgiDiGgt~~~~~l~d-------------------~~g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~--~~--~- 59 (299)
T 2e2o_A 4 IVGVDAGGTKTKAVAYD-------------------CEGNFIGEGSSGPGNYHNVGLTRAIENIKEAVKIAA--KG--E- 59 (299)
T ss_dssp EEEEEECSSCEEEEEEC-------------------TTSCEEEEEEESCCCHHHHCHHHHHHHHHHHHHHHH--TS--C-
T ss_pred EEEEEeCCCcEEEEEEc-------------------CCCCEEEEEeCCCCCcccCCHHHHHHHHHHHHHHHH--hc--C-
Confidence 58999999999999976 3344 445567775 34566655544321111 00 0
Q ss_pred CCCceEEEEecC----chHhhHHHHHHHhCCCcceeehhhHHHHhHH
Q 030315 97 ASDKTLIKATGG----GAYKFADLIKEKLGVVLDKEDEMDCLVTGAN 139 (179)
Q Consensus 97 ~~~~~~i~aTGG----GA~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~ 139 (179)
....-|.++|= |.....+.+++ +++++.......|...|-.
T Consensus 60 -~~~igi~~~G~~~~~~~~~l~~~l~~-~~~pv~v~ND~~aaa~~e~ 104 (299)
T 2e2o_A 60 -ADVVGMGVAGLDSKFDWENFTPLASL-IAPKVIIQHDGVIALFAET 104 (299)
T ss_dssp -CSEEEEEETTCCSHHHHHHHHHHHTT-SSSEEEEEEHHHHHHHHHH
T ss_pred -CCEEEEEcCCCCchhHHHHHHHHHHh-CCCCEEEeCcHHHHHhhcc
Confidence 12344556663 33556777877 8888888888888887743
No 7
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=92.41 E-value=2.3 Score=34.46 Aligned_cols=92 Identities=15% Similarity=0.273 Sum_probs=59.4
Q ss_pred CCeEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCCeEEEEEeec-cCHHHHHHHHHhhhhhcccccccCCCCCC
Q 030315 21 ISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFET-SKIIDCLEFIRSKNLHLAGFRHHDASASD 99 (179)
Q Consensus 21 ~~~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G~LhF~kFeT-~~i~~~i~fik~~~l~~~~~~~~~~~~~~ 99 (179)
+..+|||||||-+|++-+.. .+..+.-.++++ ...+++++.|.+.... . + ..
T Consensus 4 m~~lgidiggt~i~~~l~d~------------------~g~il~~~~~~~~~~~~~~~~~i~~~i~~-~---~-----i~ 56 (292)
T 2gup_A 4 MTIATIDIGGTGIKFASLTP------------------DGKILDKTSISTPENLEDLLAWLDQRLSE-Q---D-----YS 56 (292)
T ss_dssp CCEEEEEEETTEEEEEEECT------------------TCCEEEEEEECCCSSHHHHHHHHHHHHTT-S---C-----CS
T ss_pred cEEEEEEECCCEEEEEEECC------------------CCCEEEEEEEeCCCCHHHHHHHHHHHHHh-C---C-----Cc
Confidence 35799999999999988651 233355566777 4677887777654211 0 0 00
Q ss_pred ceEEEEec------C---------c--hHhhHHHHHHHhCCCcceeehhhHHHHhHHH
Q 030315 100 KTLIKATG------G---------G--AYKFADLIKEKLGVVLDKEDEMDCLVTGANF 140 (179)
Q Consensus 100 ~~~i~aTG------G---------G--A~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~f 140 (179)
...|.+.| | + -+.+.+.| +++++++..+....|...|-.+
T Consensus 57 gigi~~pG~vd~~~g~v~~~~~~~~~~~~~l~~~l-~~~~~pv~v~NDa~aaa~~e~~ 113 (292)
T 2gup_A 57 GIAMSVPGAVNQETGVIDGFSAVPYIHGFSWYEAL-SSYQLPVHLENDANCVGLSELL 113 (292)
T ss_dssp EEEEEESSEECTTTCBEESCCSSGGGSSSBHHHHT-GGGCCCEEEEEHHHHHHHHHHH
T ss_pred EEEEEecCcccCCCCEEEecCCCCcccCCCHHHHH-HHcCCCEEEechHHHHHHHHHH
Confidence 11122222 0 1 13467888 8999999999999999988765
No 8
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=91.92 E-value=1.6 Score=36.31 Aligned_cols=32 Identities=13% Similarity=0.217 Sum_probs=27.5
Q ss_pred HhhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 111 YKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 111 ~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
+...+.|++.+++++..+....|...|-.++-
T Consensus 86 ~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g 117 (321)
T 3vgl_A 86 EPLKDKVEQRVGLPVVVENDANAAAWGEYRFG 117 (321)
T ss_dssp ECHHHHHHHHHCSCEEEEEHHHHHHHHHHHHS
T ss_pred CCHHHHHhhhhCCCEEEEehhhhHHHHHHHhC
Confidence 44678999999999999999999999977664
No 9
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=91.87 E-value=3 Score=34.09 Aligned_cols=31 Identities=13% Similarity=0.296 Sum_probs=26.1
Q ss_pred hhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 112 KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 112 Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
.+.+.|++.+++++..+....|...|-.++-
T Consensus 99 ~l~~~l~~~~~~pv~v~ND~~aaa~~e~~~g 129 (326)
T 2qm1_A 99 PVKEQIESALGIPFALDNDANVAALGERWKG 129 (326)
T ss_dssp CHHHHHHHHHCSCEEEEEHHHHHHHHHHHHS
T ss_pred hHHHHHHHHhCCCEEEecHHHHHHHHHHHhC
Confidence 5588899999999999999999988876653
No 10
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=91.55 E-value=3.7 Score=33.10 Aligned_cols=93 Identities=14% Similarity=0.132 Sum_probs=59.7
Q ss_pred eEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCCe-EEEEEeeccC---HHHHHHHHHhhhhhcccccccCCCCC
Q 030315 23 HLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGR-LHFAKFETSK---IIDCLEFIRSKNLHLAGFRHHDASAS 98 (179)
Q Consensus 23 ~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G~-LhF~kFeT~~---i~~~i~fik~~~l~~~~~~~~~~~~~ 98 (179)
.+|||||||-+|++-+. ..|+ +.-.++++.. .+++++.|.+...... ...
T Consensus 3 ~lgidiggt~~~~~l~d-------------------~~g~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~--~~~----- 56 (289)
T 2aa4_A 3 TLAIDIGGTKLAAALIG-------------------ADGQIRDRRELPTPASQTPEALRDALSALVSPLQ--AHA----- 56 (289)
T ss_dssp EEEEEECSSEEEEEEEC-------------------TTCCEEEEEEEECCSSCCHHHHHHHHHHHHTTTG--GGC-----
T ss_pred EEEEEeCCCEEEEEEEC-------------------CCCCEEEEEEecCCCCCCHHHHHHHHHHHHHHHH--hhC-----
Confidence 58999999999999865 2343 5556677653 6778877766432111 000
Q ss_pred CceEEEEecC-----c------h------HhhHHHHHHHhCCCcceeehhhHHHHhHHHH
Q 030315 99 DKTLIKATGG-----G------A------YKFADLIKEKLGVVLDKEDEMDCLVTGANFL 141 (179)
Q Consensus 99 ~~~~i~aTGG-----G------A------~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fL 141 (179)
...-|.+.|= | . +.+.+.|++.+++++..+....|...|-.++
T Consensus 57 ~~igi~~pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaa~~e~~~ 116 (289)
T 2aa4_A 57 QRVAIASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQA 116 (289)
T ss_dssp SEEEEEESSEEETTEEECSSGGGGGGGTTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHT
T ss_pred CEEEEEeccceeCCCCEEEeCCCCCcccCCChHHHHHHHHCCCEEEechHHHHHHHHHHh
Confidence 1122222220 1 1 2357889999999999999999998887654
No 11
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=91.31 E-value=2.6 Score=34.66 Aligned_cols=102 Identities=19% Similarity=0.287 Sum_probs=59.2
Q ss_pred CCeEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCCe-EEEEEeecc--CHHHHHHHHHhhhhhcc---cc--cc
Q 030315 21 ISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGR-LHFAKFETS--KIIDCLEFIRSKNLHLA---GF--RH 92 (179)
Q Consensus 21 ~~~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G~-LhF~kFeT~--~i~~~i~fik~~~l~~~---~~--~~ 92 (179)
+..+|||||||-+|++-+. ..|+ +.-.++++. .-+++++.+.+...... .+ .-
T Consensus 4 m~~lgiDiGgt~i~~~l~d-------------------~~G~il~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~gigi~~ 64 (297)
T 4htl_A 4 MKIAAFDIGGTALKMGVVL-------------------PHGEIILTKSAEISGSDGDQILAEMKVFLAENTDVTGIAVSA 64 (297)
T ss_dssp CCEEEEEECSSEEEEEEEC-------------------TTSCEEEEEEEECSTTCHHHHHHHHHHHHHTCTTCCEEEEEE
T ss_pred cEEEEEEeCCCeEEEEEEC-------------------CCCCEEEEEEecCCCCCHHHHHHHHHHHHhhcCCeeEEEEec
Confidence 4579999999999999865 2333 444556653 33555554433211100 00 00
Q ss_pred cCCC-CCCceEEEEecC--c--hHhhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 93 HDAS-ASDKTLIKATGG--G--AYKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 93 ~~~~-~~~~~~i~aTGG--G--A~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
.+. +.....+..+.- + -+...+.+++.+++++..+....|...|-.++-
T Consensus 65 -pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~pV~v~NDa~aaal~E~~~g 118 (297)
T 4htl_A 65 -PGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGLPVAIENDANCALLAEKWLG 118 (297)
T ss_dssp -SSEECTTTCEEEECTTCGGGTTEEHHHHHHHHHCSCEEEEEHHHHHHHHHHHHS
T ss_pred -CcceeCCCCEEEeCCCCCCccCCCHHHHHHHHHCcCEEEecHHHHHHHHHHHhC
Confidence 010 001122332221 1 134678899999999999999999999977654
No 12
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=90.68 E-value=0.61 Score=38.90 Aligned_cols=42 Identities=19% Similarity=0.101 Sum_probs=30.3
Q ss_pred CeEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCCeE-EEEEeecc--CHHHHHHHHHhh
Q 030315 22 SHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRL-HFAKFETS--KIIDCLEFIRSK 83 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G~L-hF~kFeT~--~i~~~i~fik~~ 83 (179)
+.++||||+|-+|+..|+ . +++ +-.+++|. .-+++..++++.
T Consensus 3 MlL~IDIGNT~iK~gl~d-------------------~-~~l~~~~r~~T~~~t~de~~~~l~~l 47 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFD-------------------G-DEIKLRFRHTSKVSTSDELGIFLKSV 47 (266)
T ss_dssp CEEEEEECSSEEEEEEEE-------------------T-TEEEEEEEEECSCCCHHHHHHHHHHH
T ss_pred eEEEEEECCCeEEEEEEE-------------------C-CEEEEEEEecCCCCCHHHHHHHHHHH
Confidence 679999999999999988 2 344 44567775 356676666553
No 13
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=90.54 E-value=0.48 Score=38.94 Aligned_cols=44 Identities=9% Similarity=-0.020 Sum_probs=30.5
Q ss_pred CCeEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCCeEEEEEeeccC---HHHHHHHHHhh
Q 030315 21 ISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSK---IIDCLEFIRSK 83 (179)
Q Consensus 21 ~~~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G~LhF~kFeT~~---i~~~i~fik~~ 83 (179)
.++++||||+|-+|+..|+ .+.-+...+++|.. -+++..++++.
T Consensus 3 ~M~L~IDIGNT~ik~gl~~-------------------~~~l~~~~r~~T~~~~t~de~~~~l~~l 49 (249)
T 3bex_A 3 PMYLLVDVGNTHSVFSITE-------------------DGKTFRRWRLSTGVFQTEDELFSHLHPL 49 (249)
T ss_dssp CEEEEEEECSSEEEEEEES-------------------SSSSCEEEEEECCTTCCHHHHHHHHHHH
T ss_pred ceEEEEEECCCeEEEEEEE-------------------CCEEEEEEEecCCCCCCHHHHHHHHHHH
Confidence 3789999999999999987 12223445677743 46777777653
No 14
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=90.19 E-value=3.1 Score=34.01 Aligned_cols=94 Identities=14% Similarity=0.023 Sum_probs=55.9
Q ss_pred eEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCCeEEEEEeecc-----CHHHHHHHHHhhhhhcccccccCCCC
Q 030315 23 HLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETS-----KIIDCLEFIRSKNLHLAGFRHHDASA 97 (179)
Q Consensus 23 ~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G~LhF~kFeT~-----~i~~~i~fik~~~l~~~~~~~~~~~~ 97 (179)
.+|||||||-+|.+-+. . +..+.-.+.+++ ..+++++-|.+......... ...
T Consensus 2 ~lgiDiGGT~~~~~l~d-~------------------g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~---~~~ 59 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-E------------------GKSLGRFQTSGINPFQQDRNEIDTALRSEVLPAIGQK---ASS 59 (291)
T ss_dssp EEEEEECSSEEEEEEEE-T------------------TEEEEEEEEECCCTTTSCHHHHHHHHTTTTHHHHTTS---TTT
T ss_pred EEEEEeCccceEEEEEe-C------------------CeEEEEEECCCCCcccCCHHHHHHHHHHHHHHHhCCC---ccc
Confidence 58999999999998855 1 223444455442 45667776655432111000 011
Q ss_pred CCceEEEEecCch---HhhHHHHHHHhCC--CcceeehhhHHHHhH
Q 030315 98 SDKTLIKATGGGA---YKFADLIKEKLGV--VLDKEDEMDCLVTGA 138 (179)
Q Consensus 98 ~~~~~i~aTGGGA---~Kf~dl~~~~lgv--~~~k~DEMecLI~Gl 138 (179)
....-|.++|=.. ..+.+.+++.++. ++.......|...|-
T Consensus 60 i~~igig~pG~~~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge 105 (291)
T 1zbs_A 60 IRAVYFYGAGCTPAKAPMLNEALDSMLPHCDRIEVAGDMLGAARAL 105 (291)
T ss_dssp CCEEEEEETTCCTTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHH
T ss_pred ccEEEEECCCCChHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhh
Confidence 1234456666331 2477888989984 788888888877663
No 15
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=89.96 E-value=3.2 Score=34.35 Aligned_cols=92 Identities=13% Similarity=0.100 Sum_probs=53.7
Q ss_pred eEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCCe-EEEEEeecc-----CHHHHHHHHHhhhh---hccccccc
Q 030315 23 HLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGR-LHFAKFETS-----KIIDCLEFIRSKNL---HLAGFRHH 93 (179)
Q Consensus 23 ~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G~-LhF~kFeT~-----~i~~~i~fik~~~l---~~~~~~~~ 93 (179)
.+|||||||-+|++-+. ..|+ +.-.++++. ..+++++.+.+... ......
T Consensus 8 ~lgiDiGgt~~~~~l~d-------------------~~g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~-- 66 (347)
T 2ch5_A 8 YGGVEGGGTRSEVLLVS-------------------EDGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVD-- 66 (347)
T ss_dssp EEEEEECTTCEEEEEEE-------------------TTSCEEEEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCC--
T ss_pred EEEEEcCccceEEEEEe-------------------CCCCEEEEEeCCCCCcccCCHHHHHHHHHHHHHHHHHhcCCC--
Confidence 69999999999999876 2343 444455322 33444444433211 111000
Q ss_pred CCCCCCceEEEEecCch------HhhHHHHHHHhC---CCcceeehhhHHHHh
Q 030315 94 DASASDKTLIKATGGGA------YKFADLIKEKLG---VVLDKEDEMDCLVTG 137 (179)
Q Consensus 94 ~~~~~~~~~i~aTGGGA------~Kf~dl~~~~lg---v~~~k~DEMecLI~G 137 (179)
.......|.+.--|. ....+.+++.++ +++..+....|...|
T Consensus 67 --~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a 117 (347)
T 2ch5_A 67 --PLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIAT 117 (347)
T ss_dssp --TTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHH
T ss_pred --cccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHh
Confidence 000123344444443 466778888887 888899999999888
No 16
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=89.93 E-value=1.6 Score=36.39 Aligned_cols=105 Identities=13% Similarity=0.106 Sum_probs=55.6
Q ss_pred CCCCCeEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCCeEEEEEeeccCHHHHHHHHHhhhhhcc-cccc----
Q 030315 18 ESQISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSKIIDCLEFIRSKNLHLA-GFRH---- 92 (179)
Q Consensus 18 ~~~~~~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G~LhF~kFeT~~i~~~i~fik~~~l~~~-~~~~---- 92 (179)
-+....+|+|||||-+|++-+... .+..+...+++|...+.+.+.+++...... ....
T Consensus 11 ~~~~~~lgiDiGGT~i~~~l~dl~-----------------~g~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~gigi~ 73 (332)
T 1sz2_A 11 GSTKYALVGDVGGTNARLALCDIA-----------------SGEISQAKTYSGLDYPSLEAVIRVYLEEHKVEVKDGCIA 73 (332)
T ss_dssp ---CEEEEEEEETTEEEEEEEETT-----------------TCCEEEEEEEEGGGCSCHHHHHHHHHHHSCCCCCEEEEE
T ss_pred CCCCEEEEEEechhheEEEEEECC-----------------CCcEEEEEEecCCCcCCHHHHHHHHHHhcCCCccEEEEE
Confidence 445567899999999999986511 122344567787644444444433211000 0000
Q ss_pred cCCCCCCceEEEEecCc-hHhhHHHHHHHhCCC-cceeehhhHHHHhHHHH
Q 030315 93 HDASASDKTLIKATGGG-AYKFADLIKEKLGVV-LDKEDEMDCLVTGANFL 141 (179)
Q Consensus 93 ~~~~~~~~~~i~aTGGG-A~Kf~dl~~~~lgv~-~~k~DEMecLI~Gl~fL 141 (179)
..++- +...+.+|-=+ .+- .+.++++++++ +..+....|...|-.++
T Consensus 74 ~pG~v-d~~~~~~~nl~w~~~-~~~l~~~~~~p~V~v~NDanaaalgE~~~ 122 (332)
T 1sz2_A 74 IACPI-TGDWVAMTNHTWAFS-IAEMKKNLGFSHLEIINDFTAVSMAIPML 122 (332)
T ss_dssp ESSCC-CSSEECCSSSCCCEE-HHHHHHHHTCSEEEEEEHHHHHHHHGGGC
T ss_pred EeCce-eCCEEeeeCCCCcCC-HHHHHHHhCCCcEEEEeCHhHHhcccccc
Confidence 00100 01111111000 123 46788999997 99999999999886554
No 17
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=89.90 E-value=0.75 Score=38.82 Aligned_cols=44 Identities=11% Similarity=-0.030 Sum_probs=36.4
Q ss_pred ceEEEEecCchHhhHHHHHHHhCCCccee-ehhhHHHHhHHHHHH
Q 030315 100 KTLIKATGGGAYKFADLIKEKLGVVLDKE-DEMDCLVTGANFLLK 143 (179)
Q Consensus 100 ~~~i~aTGGGA~Kf~dl~~~~lgv~~~k~-DEMecLI~Gl~fLL~ 143 (179)
...|.+|||||.-+.+.+++.++.++... |=+.|.+.|+.-++.
T Consensus 279 ~~~IvltGGGA~l~~~~l~~~~~~~v~v~~~P~~a~a~G~~~~~~ 323 (329)
T 4apw_A 279 LDSLIFIGGTTQKLKEQISKTYPNNSIITNNSQWTTCEGLYKVAV 323 (329)
T ss_dssp CSEEEEESTTHHHHHHHHHHHSTTCEECCSSGGGHHHHHHHHHHH
T ss_pred ccEEEEECChHHHHHHHHHHHcCCCCEecCCChhhHHHHHHHHHh
Confidence 35799999999999999999999666554 567799999887764
No 18
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=89.74 E-value=4.8 Score=33.53 Aligned_cols=102 Identities=15% Similarity=0.150 Sum_probs=59.6
Q ss_pred CeEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCC-eEEEEEeecc--CHHHHHHHHHhhhhh---ccccccc--
Q 030315 22 SHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEG-RLHFAKFETS--KIIDCLEFIRSKNLH---LAGFRHH-- 93 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G-~LhF~kFeT~--~i~~~i~fik~~~l~---~~~~~~~-- 93 (179)
..+|||||||-+|++-+. ..| .+.-.++++. ..+++++.|.+.... .......
T Consensus 25 ~~lgiDiGgt~i~~~l~d-------------------~~G~il~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~gig 85 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFN-------------------EKLERVATERVPTPTDDYPLLLETIAGLVAKYDQEFACEGKIG 85 (327)
T ss_dssp CEEEEEECSSEEEEEEEC-------------------TTCCEEEEEEEECCTTCHHHHHHHHHHHHHHHHHHHTSCCEEE
T ss_pred EEEEEEECCCEEEEEEEe-------------------CCCcEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhcCCccEEE
Confidence 689999999999999866 233 3555667765 455665554432110 0000000
Q ss_pred ---CCC-CCCceEEEEecC---chHhhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 94 ---DAS-ASDKTLIKATGG---GAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 94 ---~~~-~~~~~~i~aTGG---GA~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
.+. +.....+..+.= --+.+.+.|++.+++++..+....|...|-.++-
T Consensus 86 i~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pV~v~NDa~aaalgE~~~g 141 (327)
T 4db3_A 86 LGLPGMEDADDATVLTVNVPAAKGKPLRADLEAKIGRSVKIENDANCFALSEAWDE 141 (327)
T ss_dssp EEESEEECTTTCCEEESSSGGGTTSCHHHHHHHHHSSCCEEEEHHHHHHHHHHTST
T ss_pred EEeeccEeCCCCEEEcCCCccccCCCHHHHHHHHHCCCEEEecchhHHHHHHHHhC
Confidence 000 000112222211 1134578999999999999999999998876543
No 19
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=89.62 E-value=4.5 Score=33.32 Aligned_cols=32 Identities=13% Similarity=0.216 Sum_probs=27.2
Q ss_pred HhhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 111 YKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 111 ~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
+...+.|++.+++++..+....|...|-.++-
T Consensus 88 ~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g 119 (302)
T 3vov_A 88 FPIRRILEEATGRPVFLENDANAAALAEHHLG 119 (302)
T ss_dssp CCHHHHHHHHHSSCEEEEEHHHHHHHHHHHHS
T ss_pred CChHHHHHHhhCCCEEEEechHHHHHHHHHhC
Confidence 34578899999999999999999999977654
No 20
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=89.61 E-value=3.3 Score=35.86 Aligned_cols=32 Identities=6% Similarity=0.062 Sum_probs=27.0
Q ss_pred HhhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 111 YKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 111 ~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
+.+.+.|++.+++++..+....|...|-.++-
T Consensus 198 ~~l~~~L~~~~~~pV~v~NDa~aaalaE~~~g 229 (429)
T 1z05_A 198 LALGPEIYKATGLPVFVANDTRAWALAEKLFG 229 (429)
T ss_dssp BCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHhCCCEEEechhHHHHHHHHHhC
Confidence 35678899999999999999999998876653
No 21
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=89.14 E-value=1.7 Score=34.64 Aligned_cols=39 Identities=21% Similarity=0.258 Sum_probs=28.9
Q ss_pred eEEEEecCchH--hhHHHHHHHhCCCcce-eehhhHHHHhHH
Q 030315 101 TLIKATGGGAY--KFADLIKEKLGVVLDK-EDEMDCLVTGAN 139 (179)
Q Consensus 101 ~~i~aTGGGA~--Kf~dl~~~~lgv~~~k-~DEMecLI~Gl~ 139 (179)
..|.+|||+|. .+.+.+++.|+.++.. .+=..+...|+-
T Consensus 228 ~~ivL~GG~a~~~~l~~~l~~~l~~~v~~~~~p~~a~a~Gaa 269 (272)
T 3h1q_A 228 LPVYVVGGTAYLTGFSEEFSRFLGKEVQVPIHPLLVTPLGIA 269 (272)
T ss_dssp CCEEEESGGGGSTTHHHHHHHHHSSCCBCCSSGGGHHHHHHH
T ss_pred CEEEEECCccchhhHHHHHHHHhCCCccccCChHHHHHHHHH
Confidence 46999999994 5789999999988765 333456666653
No 22
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=88.93 E-value=3.7 Score=34.94 Aligned_cols=30 Identities=30% Similarity=0.488 Sum_probs=25.8
Q ss_pred hhHHHHHHHhCCCcceeehhhHHHHhHHHH
Q 030315 112 KFADLIKEKLGVVLDKEDEMDCLVTGANFL 141 (179)
Q Consensus 112 Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fL 141 (179)
.+.+.|++.+++++..++...|...|-.++
T Consensus 179 ~l~~~l~~~~~~pV~v~NDanaaalaE~~~ 208 (380)
T 2hoe_A 179 PLANLLKEKYGIEVWVENDADMGAVGEKWY 208 (380)
T ss_dssp CHHHHHHHHHCSEEEEEEHHHHHHHHHHHH
T ss_pred ChHHHHHHHhCCCEEEechHHHHHHHHHHh
Confidence 457889999999999999999999887655
No 23
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=86.91 E-value=12 Score=31.70 Aligned_cols=32 Identities=6% Similarity=0.211 Sum_probs=26.8
Q ss_pred HhhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 111 YKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 111 ~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
+...+.|++.+++++..++...|...|-.++-
T Consensus 176 ~~l~~~l~~~~~~pv~v~NDa~aaalaE~~~g 207 (406)
T 1z6r_A 176 MPLGEALEQHTGVPVYIQHDISAWTMAEALFG 207 (406)
T ss_dssp BCHHHHHHHHHSSCEEEEEHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHCCCEEEechhHHHHHHHHHhc
Confidence 34678899999999999999999998876653
No 24
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=86.26 E-value=1.3 Score=39.56 Aligned_cols=22 Identities=27% Similarity=0.386 Sum_probs=18.9
Q ss_pred CCCCCeEEEecCCceeEEEEEe
Q 030315 18 ESQISHLALDIGGSLIKVVYFL 39 (179)
Q Consensus 18 ~~~~~~~aiDIGGTL~KlVYf~ 39 (179)
.+.-..+|||||||-+|++.+.
T Consensus 58 ~E~G~~laiDlGGTnirv~lV~ 79 (457)
T 2yhx_A 58 AQAGSFLAIVMGGGDLEVILIS 79 (457)
T ss_dssp CCCEEEEEEEECSSEEEEEEEE
T ss_pred CccceEEEEEeCCCeEEEEEEE
Confidence 4556679999999999999987
No 25
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=85.78 E-value=6.7 Score=32.53 Aligned_cols=31 Identities=6% Similarity=0.180 Sum_probs=26.1
Q ss_pred HhhHHHHHHHhCCCcceeehhhHHHHhHHHH
Q 030315 111 YKFADLIKEKLGVVLDKEDEMDCLVTGANFL 141 (179)
Q Consensus 111 ~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fL 141 (179)
+.+.+.|++.+++++..+....|...|-.++
T Consensus 121 ~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~ 151 (343)
T 2yhw_A 121 VDLRTPLSDTLHLPVWVDNDGNCAALAERKF 151 (343)
T ss_dssp EECHHHHHHHHCSCEEEEEHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHCCCEEEechhHHHHHHHHHh
Confidence 3567899999999999999999998886654
No 26
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=84.84 E-value=2.3 Score=35.30 Aligned_cols=41 Identities=20% Similarity=0.259 Sum_probs=28.8
Q ss_pred CeEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCCe-EEEEEeeccC---HHHHHHHHHh
Q 030315 22 SHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGR-LHFAKFETSK---IIDCLEFIRS 82 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G~-LhF~kFeT~~---i~~~i~fik~ 82 (179)
+.++||||.|-+|+..|+ +++ +.-.+++|.. -+++..++++
T Consensus 1 MlL~IDIGNT~ik~gl~~--------------------~~~l~~~~r~~T~~~~t~de~~~~l~~ 45 (268)
T 2h3g_X 1 MIFVLDVGNTNAVLGVFE--------------------EGELRQHWRMETDRHKTEDEYGMLVKQ 45 (268)
T ss_dssp CEEEEEECSSEEEEEEEE--------------------TTEEEEEEEEECCTTCCHHHHHHHHHH
T ss_pred CEEEEEECcCcEEEEEEE--------------------CCEEEEEEEecCCCcCCHHHHHHHHHH
Confidence 468999999999999987 233 3345667753 4676666655
No 27
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=83.29 E-value=2 Score=34.70 Aligned_cols=22 Identities=9% Similarity=0.101 Sum_probs=18.0
Q ss_pred HHHHhCCCcceeehhhHHHHhH
Q 030315 117 IKEKLGVVLDKEDEMDCLVTGA 138 (179)
Q Consensus 117 ~~~~lgv~~~k~DEMecLI~Gl 138 (179)
+++++++++..+....|...|-
T Consensus 87 l~~~~~~pv~v~NDanaaalge 108 (226)
T 3lm2_A 87 YEGAFGRPVRIVNDALMQAIGS 108 (226)
T ss_dssp HHHHHTSCEEEEEHHHHHHHHH
T ss_pred hHHhcCCeEEEEEHHHHHHHHH
Confidence 4678899999999999888763
No 28
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=82.97 E-value=1.6 Score=42.26 Aligned_cols=22 Identities=27% Similarity=0.502 Sum_probs=18.8
Q ss_pred CCCCCeEEEecCCceeEEEEEe
Q 030315 18 ESQISHLALDIGGSLIKVVYFL 39 (179)
Q Consensus 18 ~~~~~~~aiDIGGTL~KlVYf~ 39 (179)
.+.-..+|||||||-+|++-+.
T Consensus 75 ~E~G~~laiDlGGTnirv~lv~ 96 (917)
T 1cza_N 75 SEKGDFIALDLGGSSFRILRVQ 96 (917)
T ss_dssp CCCEEEEEEEESSSSEEEEEEE
T ss_pred CCcceEEEEEeCCCeEEEEEEE
Confidence 4455679999999999999987
No 29
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=81.24 E-value=18 Score=29.73 Aligned_cols=32 Identities=9% Similarity=0.409 Sum_probs=27.4
Q ss_pred HhhHHHHHHHh-CCCcceeehhhHHHHhHHHHH
Q 030315 111 YKFADLIKEKL-GVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 111 ~Kf~dl~~~~l-gv~~~k~DEMecLI~Gl~fLL 142 (179)
+...+.|++.+ ++++..++...|...|-.++-
T Consensus 107 ~~l~~~l~~~~~~~pV~v~NDa~aaalaE~~~g 139 (321)
T 3r8e_A 107 VPIVEILRSEFPHIHFKIENDAKCAALGEYYFG 139 (321)
T ss_dssp CCHHHHHHHHCTTSEEEEEEHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHcCCCCEEEEchHHHHHHHHHHhC
Confidence 45678899999 999999999999998877663
No 30
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=79.97 E-value=3.2 Score=36.92 Aligned_cols=22 Identities=32% Similarity=0.457 Sum_probs=18.7
Q ss_pred CCCCCeEEEecCCceeEEEEEe
Q 030315 18 ESQISHLALDIGGSLIKVVYFL 39 (179)
Q Consensus 18 ~~~~~~~aiDIGGTL~KlVYf~ 39 (179)
.+.-..+|||+|||-.+++.+.
T Consensus 65 ~E~G~~lalDlGGTn~Rv~~V~ 86 (451)
T 1bdg_A 65 TETGNFLALDLGGTNYRVLSVT 86 (451)
T ss_dssp CCCEEEEEEEESSSSEEEEEEE
T ss_pred CccceEEEEEeCCCeEEEEEEe
Confidence 3445679999999999999987
No 31
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=79.23 E-value=6.5 Score=31.51 Aligned_cols=105 Identities=17% Similarity=0.159 Sum_probs=59.2
Q ss_pred CCCCeEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCCeEE--EEEeecc---CHHHHHHHHHhhhhhccccccc
Q 030315 19 SQISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLH--FAKFETS---KIIDCLEFIRSKNLHLAGFRHH 93 (179)
Q Consensus 19 ~~~~~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G~Lh--F~kFeT~---~i~~~i~fik~~~l~~~~~~~~ 93 (179)
+....+|||||||-+|++-+. ..+|++. -.++++. ..+++++.+.+...........
T Consensus 10 ~~~~~lgidiggt~i~~~l~d------------------l~~g~i~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~ 71 (267)
T 1woq_A 10 KNAPLIGIDIGGTGIKGGIVD------------------LKKGKLLGERFRVPTPQPATPESVAEAVALVVAELSARPEA 71 (267)
T ss_dssp -CCCEEEEEECSSEEEEEEEE------------------TTTTEEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHTSTTC
T ss_pred CCCEEEEEEECCCEEEEEEEE------------------CCCCeEEEEEEecCCCccCCHHHHHHHHHHHHHHHHHhccc
Confidence 344579999999999999866 1235543 3466664 3455555444321111000000
Q ss_pred CCCCCCceEEEEec----C----------c--hHhhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 94 DASASDKTLIKATG----G----------G--AYKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 94 ~~~~~~~~~i~aTG----G----------G--A~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
.......-|.+.| | + -+.+.+.|++++++++..+.+..|...|-.++-
T Consensus 72 -~~~~~~igi~~pG~v~~g~v~~~~~l~~~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~g 135 (267)
T 1woq_A 72 -PAAGSPVGVTFPGIIQHGVVHSAANVDKSWLNTDIDALLTARLGRPVEVINDADAAGLAEARYG 135 (267)
T ss_dssp -CCTTCCEEEEESSCEETTEECCCTTSCGGGTTCBHHHHHHHHHTSCEEEEEHHHHHHHHHHHHS
T ss_pred -cCccceEEEEccceEcCCEEEeCCCCCCCCCCCCHHHHHHHHHCCCEEEeehhHHHHHHHHHhC
Confidence 0000012222222 0 1 134568899999999999999999999876653
No 32
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=78.47 E-value=10 Score=32.37 Aligned_cols=17 Identities=24% Similarity=0.356 Sum_probs=15.6
Q ss_pred eEEEecCCceeEEEEEe
Q 030315 23 HLALDIGGSLIKVVYFL 39 (179)
Q Consensus 23 ~~aiDIGGTL~KlVYf~ 39 (179)
.++||||||-+|++-+.
T Consensus 4 vlgidiGgt~ik~al~d 20 (381)
T 1saz_A 4 ILTINPGSTSTKLSIFE 20 (381)
T ss_dssp EEEEEECSSEEEEEEEE
T ss_pred EEEEECCccceeEEEEe
Confidence 58999999999999976
No 33
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=77.98 E-value=3.5 Score=34.06 Aligned_cols=41 Identities=27% Similarity=0.322 Sum_probs=31.5
Q ss_pred ceEEEEecCchHhhHHHHHHHhCC---Cccee-ehhhHHHHhHHH
Q 030315 100 KTLIKATGGGAYKFADLIKEKLGV---VLDKE-DEMDCLVTGANF 140 (179)
Q Consensus 100 ~~~i~aTGGGA~Kf~dl~~~~lgv---~~~k~-DEMecLI~Gl~f 140 (179)
...|.+|||||.-+.+.+++.++. ++... +=..|.+.|+-.
T Consensus 273 ~~~vvl~GGga~ll~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~ 317 (320)
T 2zgy_A 273 YTHVMVIGGGAELICDAVKKHTQIRDERFFKTNNSQYDLVNGMYL 317 (320)
T ss_dssp CCEEEEESTTHHHHHHHHHHTSCCCGGGEECCSCGGGHHHHHHHH
T ss_pred CCeEEEECChHHHHHHHHHHHhCCCCCceeeCCCcHHHHHHHHHH
Confidence 467999999999889999998887 34443 447788888754
No 34
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=76.57 E-value=7.1 Score=32.09 Aligned_cols=97 Identities=14% Similarity=0.160 Sum_probs=57.6
Q ss_pred CeEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCCe-EEEEEeecc--CHHHHHHHHHhhhhhcccccccCCCCC
Q 030315 22 SHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGR-LHFAKFETS--KIIDCLEFIRSKNLHLAGFRHHDASAS 98 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G~-LhF~kFeT~--~i~~~i~fik~~~l~~~~~~~~~~~~~ 98 (179)
..+|||||||-++++-+. ..|+ +.-.++++. ..+++++.|.+....... .. ...
T Consensus 25 ~~lgiDiGgt~i~~~l~d-------------------~~g~il~~~~~~~~~~~~~~~~~~i~~~i~~~~~--~~--~~i 81 (327)
T 2ap1_A 25 MYYGFDIGGTKIALGVFD-------------------STRRLQWEKRVPTPHTSYSAFLDAVCELVEEADQ--RF--GVK 81 (327)
T ss_dssp EEEEEEECSSEEEEEEEE-------------------TTCCEEEEEEEECCCSCHHHHHHHHHHHHHHHHH--HH--TSC
T ss_pred eEEEEEECCCEEEEEEEe-------------------CCCCEEEEEEecCCCCCHHHHHHHHHHHHHHHHH--hc--CCc
Confidence 579999999999999866 2333 555667764 345666555442211000 00 000
Q ss_pred CceEEEEecC-----c-----------hHhhHHHHHHHhCCCcceeehhhHHHHhHHHH
Q 030315 99 DKTLIKATGG-----G-----------AYKFADLIKEKLGVVLDKEDEMDCLVTGANFL 141 (179)
Q Consensus 99 ~~~~i~aTGG-----G-----------A~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fL 141 (179)
....|.+.|= | -+.+.+.+++.+++++..+....|...|-.++
T Consensus 82 ~~igi~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pv~v~NDa~aaalgE~~~ 140 (327)
T 2ap1_A 82 GSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEAWD 140 (327)
T ss_dssp CEEEEEESSBSCCTTSCCBCTTCTTTTTSCHHHHHHHHHTSCEEEEEHHHHHHHHHHTS
T ss_pred cEEEEEeeeeEECCCCEEEccCCCccCCCChHHHHHHHHCCCEEEecHHHHHHHHHHHh
Confidence 1122222221 1 12446889999999999999999988876544
No 35
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=75.97 E-value=2.8 Score=35.55 Aligned_cols=31 Identities=10% Similarity=0.007 Sum_probs=24.0
Q ss_pred hhHHHHHHHhCC-CcceeehhhHHHHhHHHHH
Q 030315 112 KFADLIKEKLGV-VLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 112 Kf~dl~~~~lgv-~~~k~DEMecLI~Gl~fLL 142 (179)
...+++++.+++ ++..+....|...|...|-
T Consensus 118 ~l~~~l~~~~~~~pv~v~NDa~aaalge~~l~ 149 (373)
T 2q2r_A 118 RLSDYPKALFPPGHSAILNDLEAGGFGVLAVS 149 (373)
T ss_dssp EGGGSCTTTSCTTSEEEEEHHHHHHHHHHHHH
T ss_pred CHHHHHHHhcCCCCEEEEccHhHHhccccccC
Confidence 455667777888 8999999999998865543
No 36
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=73.87 E-value=5.1 Score=36.22 Aligned_cols=22 Identities=36% Similarity=0.564 Sum_probs=18.8
Q ss_pred CCCCCeEEEecCCceeEEEEEe
Q 030315 18 ESQISHLALDIGGSLIKVVYFL 39 (179)
Q Consensus 18 ~~~~~~~aiDIGGTL~KlVYf~ 39 (179)
.+.-..+|||+|||-.|++.+.
T Consensus 77 ~E~G~~LalDlGGTn~Rv~~V~ 98 (485)
T 3o8m_A 77 KETGDFLALDLGGTNLRVVLVK 98 (485)
T ss_dssp CCEEEEEEEEESSSEEEEEEEE
T ss_pred CcceEEEEEEecCCeEEEEEEE
Confidence 3445789999999999999987
No 37
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=73.75 E-value=8 Score=34.20 Aligned_cols=17 Identities=24% Similarity=0.358 Sum_probs=15.5
Q ss_pred eEEEecCCceeEEEEEe
Q 030315 23 HLALDIGGSLIKVVYFL 39 (179)
Q Consensus 23 ~~aiDIGGTL~KlVYf~ 39 (179)
.+|||||||-+|.+-+.
T Consensus 6 ~lgIDiGtT~~k~~l~d 22 (503)
T 2w40_A 6 ILSIDQSTQSTKVFFYD 22 (503)
T ss_dssp EEEEEECSSEEEEEEEE
T ss_pred EEEEEeCCcceEEEEEC
Confidence 58999999999998877
No 38
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=73.44 E-value=7.9 Score=33.99 Aligned_cols=17 Identities=29% Similarity=0.520 Sum_probs=15.4
Q ss_pred eEEEecCCceeEEEEEe
Q 030315 23 HLALDIGGSLIKVVYFL 39 (179)
Q Consensus 23 ~~aiDIGGTL~KlVYf~ 39 (179)
.+|||||||-+|.+-+.
T Consensus 2 ~lgiDiGtt~~k~~l~d 18 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLN 18 (484)
T ss_dssp EEEEEECSSEEEEEEEC
T ss_pred EEEEEecCcccEEEEEC
Confidence 48999999999998877
No 39
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=71.89 E-value=3.5 Score=33.63 Aligned_cols=27 Identities=15% Similarity=0.166 Sum_probs=20.4
Q ss_pred hhHHHHHHHhC--CCcceeehhhHHHHhH
Q 030315 112 KFADLIKEKLG--VVLDKEDEMDCLVTGA 138 (179)
Q Consensus 112 Kf~dl~~~~lg--v~~~k~DEMecLI~Gl 138 (179)
...+.+++.++ .++.......|...|-
T Consensus 75 ~l~~~l~~~~~~~~pv~v~NDa~~aalge 103 (291)
T 1zxo_A 75 VLRRAIADSLPVIGNIKANSDMLAAAHGL 103 (291)
T ss_dssp HHHHHHHHHSCCCSCCEEECSHHHHHHHT
T ss_pred HHHHHHHHhcCCCceEEEECcHHHHHHhh
Confidence 47788888888 4788888888766653
No 40
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=70.35 E-value=10 Score=33.43 Aligned_cols=17 Identities=35% Similarity=0.511 Sum_probs=15.5
Q ss_pred eEEEecCCceeEEEEEe
Q 030315 23 HLALDIGGSLIKVVYFL 39 (179)
Q Consensus 23 ~~aiDIGGTL~KlVYf~ 39 (179)
.+|||||||-+|.+-+.
T Consensus 4 ~lgiDiGtT~~k~~l~d 20 (495)
T 2dpn_A 4 LLALDQGTTSSRAILFT 20 (495)
T ss_dssp EEEEEECSSEEEEEEEC
T ss_pred EEEEeeCCcceEEEEEC
Confidence 58999999999998877
No 41
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=70.28 E-value=4.3 Score=34.67 Aligned_cols=41 Identities=27% Similarity=0.250 Sum_probs=31.6
Q ss_pred eEEEEecCchHhhHH----HHHHHhCCCcceeehhhHHHHhHHHHHHh
Q 030315 101 TLIKATGGGAYKFAD----LIKEKLGVVLDKEDEMDCLVTGANFLLKF 144 (179)
Q Consensus 101 ~~i~aTGGGA~Kf~d----l~~~~lgv~~~k~DEMecLI~Gl~fLL~~ 144 (179)
..|.+|||||.-+.+ .+++.++.. .|=..|.+.|...+...
T Consensus 292 ~~Ivl~GGGa~l~~~~l~~~i~~~~~~~---~~p~~anA~G~~~~~~~ 336 (355)
T 3js6_A 292 DRIIVTGGGANIHFDSLSHYYSDVFEKA---DDSQFSNVRGYEKLGEL 336 (355)
T ss_dssp SEEEEESTTHHHHHHHHHHHSSSCEECC---SSGGGHHHHHHHHHHHH
T ss_pred cEEEEECcchhcchhhHHHHHHHHCCCC---CCcHHHHHHHHHHHHHH
Confidence 579999999998874 566555332 78899999999887753
No 42
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=69.85 E-value=11 Score=30.72 Aligned_cols=18 Identities=17% Similarity=0.255 Sum_probs=16.1
Q ss_pred CeEEEecCCceeEEEEEe
Q 030315 22 SHLALDIGGSLIKVVYFL 39 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~ 39 (179)
..+|||||||-+|++-+.
T Consensus 12 ~~lGiDiGgT~i~~~l~d 29 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHA 29 (305)
T ss_dssp EEEEEEECSSCEEEEEEE
T ss_pred EEEEEEcCccceEEEEEc
Confidence 369999999999999876
No 43
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=69.14 E-value=5.3 Score=34.61 Aligned_cols=84 Identities=19% Similarity=0.260 Sum_probs=38.2
Q ss_pred CeEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCC--eEEEEEeec----cCHHHHHHHHHhhhhhcccccccCC
Q 030315 22 SHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEG--RLHFAKFET----SKIIDCLEFIRSKNLHLAGFRHHDA 95 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G--~LhF~kFeT----~~i~~~i~fik~~~l~~~~~~~~~~ 95 (179)
+.+|+||||=-+|++..+ .+| +.++..||- .++++.++=+.+.
T Consensus 1 ~iiG~DIGGAn~K~a~~~-------------------~~g~~~~~~~~~PlW~~~~~L~~~l~~~~~~------------ 49 (334)
T 3cet_A 1 MILGIDIGGANTKITELH-------------------ENGEFKVHHLYFPMWKNNDKLAEVLKTYSND------------ 49 (334)
T ss_dssp CEEEEEEC--CEEEEEEC-------------------STTCCEEEEC---------------------------------
T ss_pred CeeEEEecccceeeeeec-------------------CCCceEEEEEecCCcCCchHHHHHHHHHHhh------------
Confidence 468999999999998844 234 467777773 3444444333221
Q ss_pred CCCCceEEEEecCchHhhHHHHHHHhCCCcceeehhhHHHHhHHHHHHh----cCCccEEEecCC
Q 030315 96 SASDKTLIKATGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKF----IKKLLLMWMVRR 156 (179)
Q Consensus 96 ~~~~~~~i~aTGGGA~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL~~----i~~E~Fty~~~~ 156 (179)
.....|..||== .|.|. .=-.|+.+++.. .+.++|.|.-.-
T Consensus 50 --~~~~avtMTgEL----aD~f~--------------~k~eGV~~I~~~v~~~~~~~v~i~~~dG 94 (334)
T 3cet_A 50 --VSHVALVTTAEL----ADSYE--------------TKKEGVDNILNAAESAFGSNISVFDSNG 94 (334)
T ss_dssp --CCEEEEEECCC------------------------CTTHHHHHHHHHHHHHHTTCEEEECSSS
T ss_pred --hccEEEEechhh----hhhhc--------------CHHHHHHHHHHHHHHhcCCceEEEecCC
Confidence 013558888732 33333 223577666643 567778776433
No 44
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=68.62 E-value=12 Score=33.09 Aligned_cols=17 Identities=29% Similarity=0.421 Sum_probs=15.5
Q ss_pred eEEEecCCceeEEEEEe
Q 030315 23 HLALDIGGSLIKVVYFL 39 (179)
Q Consensus 23 ~~aiDIGGTL~KlVYf~ 39 (179)
.+|||||||-+|.+-+.
T Consensus 5 ~lgiDiGtt~~k~~l~d 21 (497)
T 2zf5_O 5 VLSLDEGTTSARAIIFD 21 (497)
T ss_dssp EEEEEECSSEEEEEEEC
T ss_pred EEEEecCCchhEEEEEC
Confidence 58999999999998877
No 45
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=68.58 E-value=2.5 Score=35.77 Aligned_cols=44 Identities=23% Similarity=0.112 Sum_probs=33.3
Q ss_pred ceEEEEecCchHhhHHHHHHHhCCCcc---eeehhhHHHHhHHHHHH
Q 030315 100 KTLIKATGGGAYKFADLIKEKLGVVLD---KEDEMDCLVTGANFLLK 143 (179)
Q Consensus 100 ~~~i~aTGGGA~Kf~dl~~~~lgv~~~---k~DEMecLI~Gl~fLL~ 143 (179)
...|.+|||||.-+.+.+++.++.... -.|=..|.+.|+..++.
T Consensus 297 i~~IvL~GGga~ll~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 297 VTSLIPVGGGSNLIGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EEEEEEESTTHHHHGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred ccEEEEECCcHHHHHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 367999999999888888888873222 23557899999987764
No 46
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=68.26 E-value=5.1 Score=33.18 Aligned_cols=27 Identities=15% Similarity=0.331 Sum_probs=22.7
Q ss_pred HhhHHHHHHHhCCCcceeehhhHHHHh
Q 030315 111 YKFADLIKEKLGVVLDKEDEMDCLVTG 137 (179)
Q Consensus 111 ~Kf~dl~~~~lgv~~~k~DEMecLI~G 137 (179)
+.+.+.|++.+++++..+....|...+
T Consensus 97 ~~l~~~l~~~~~~pv~v~NDanaaa~~ 123 (310)
T 3htv_A 97 YDLADKLENTLNCPVEFSRDVNLQLSW 123 (310)
T ss_dssp TTHHHHHHHHHTSCEEEEEHHHHHHHH
T ss_pred ccHHHHHHHHhCCCEEEeeHHHHHHHH
Confidence 356789999999999999999987654
No 47
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=67.69 E-value=13 Score=30.96 Aligned_cols=43 Identities=21% Similarity=0.230 Sum_probs=35.0
Q ss_pred ceEEEEecCch--HhhHHHHHHHh-CCCcce-eehhhHHHHhHHHHH
Q 030315 100 KTLIKATGGGA--YKFADLIKEKL-GVVLDK-EDEMDCLVTGANFLL 142 (179)
Q Consensus 100 ~~~i~aTGGGA--~Kf~dl~~~~l-gv~~~k-~DEMecLI~Gl~fLL 142 (179)
...|.+|||+| -...+.+++.+ +.++.. .+-.+|+..|+-.+-
T Consensus 344 i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a 390 (394)
T 3qfu_A 344 VDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQA 390 (394)
T ss_dssp CCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHH
T ss_pred CCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHH
Confidence 46799999999 46899999999 777755 477889999987653
No 48
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=66.17 E-value=9 Score=32.46 Aligned_cols=44 Identities=11% Similarity=0.086 Sum_probs=36.5
Q ss_pred ceEEEEecCchH--hhHHHHHHHhCCC---------cceeehhhHHHHhHHHHHH
Q 030315 100 KTLIKATGGGAY--KFADLIKEKLGVV---------LDKEDEMDCLVTGANFLLK 143 (179)
Q Consensus 100 ~~~i~aTGGGA~--Kf~dl~~~~lgv~---------~~k~DEMecLI~Gl~fLL~ 143 (179)
...|.+|||+|. ...+.+++.+|.+ ....+=.+|++.|+-+...
T Consensus 345 i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~ 399 (409)
T 4gni_A 345 VDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQAS 399 (409)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHH
T ss_pred CCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhh
Confidence 467999999998 7889999999865 2457888999999998764
No 49
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=66.09 E-value=6.7 Score=32.76 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=27.3
Q ss_pred ceEEEEecCchHh--hHHHHHHHhCCCcceeehhhH
Q 030315 100 KTLIKATGGGAYK--FADLIKEKLGVVLDKEDEMDC 133 (179)
Q Consensus 100 ~~~i~aTGGGA~K--f~dl~~~~lgv~~~k~DEMec 133 (179)
...|.+|||||.- +.+.+++.||.++...+=+++
T Consensus 307 ~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~P~~~ 342 (377)
T 2ych_A 307 PEVGYLLGGGSKLRGLASLLTDTLGVNLEPVNPWEA 342 (377)
T ss_dssp CSEEEEESGGGGSTTHHHHHHHHHTSEEEECCGGGG
T ss_pred cCEEEEECccccchhHHHHHHHHhCCCeEecCchhh
Confidence 4679999999954 899999999988777654444
No 50
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=64.70 E-value=15 Score=32.56 Aligned_cols=17 Identities=29% Similarity=0.536 Sum_probs=15.6
Q ss_pred eEEEecCCceeEEEEEe
Q 030315 23 HLALDIGGSLIKVVYFL 39 (179)
Q Consensus 23 ~~aiDIGGTL~KlVYf~ 39 (179)
.+|||||+|-+|.+-+.
T Consensus 8 ~lgIDiGTts~Ka~l~d 24 (482)
T 3h6e_A 8 TIVIDLGKTLSKVSLWD 24 (482)
T ss_dssp CEEEEECSSEEEEEEEC
T ss_pred EEEEEcCCCCeEEEEEE
Confidence 58999999999998877
No 51
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=64.37 E-value=4.9 Score=33.22 Aligned_cols=43 Identities=23% Similarity=0.479 Sum_probs=35.9
Q ss_pred eEEEEecCchHh--hHHHHHHHhCCCccee-ehhhHHHHhHHHHHH
Q 030315 101 TLIKATGGGAYK--FADLIKEKLGVVLDKE-DEMDCLVTGANFLLK 143 (179)
Q Consensus 101 ~~i~aTGGGA~K--f~dl~~~~lgv~~~k~-DEMecLI~Gl~fLL~ 143 (179)
..|.+|||+|.- +.+.+++.++.++... |=..|...|+..+..
T Consensus 279 ~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~ 324 (344)
T 1jce_A 279 RGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLD 324 (344)
T ss_dssp HCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGG
T ss_pred CcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHh
Confidence 369999999966 8999999999887664 668899999887664
No 52
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=64.12 E-value=16 Score=32.27 Aligned_cols=17 Identities=29% Similarity=0.411 Sum_probs=15.6
Q ss_pred eEEEecCCceeEEEEEe
Q 030315 23 HLALDIGGSLIKVVYFL 39 (179)
Q Consensus 23 ~~aiDIGGTL~KlVYf~ 39 (179)
.+|||||+|-+|.+-+.
T Consensus 4 ~lgiDiGtts~k~~l~d 20 (504)
T 2d4w_A 4 VLAIDQGTTSSRAIVFD 20 (504)
T ss_dssp EEEEEECSSEEEEEEEC
T ss_pred EEEEecCCcceEEEEEC
Confidence 58999999999998877
No 53
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=61.14 E-value=11 Score=33.43 Aligned_cols=17 Identities=24% Similarity=0.419 Sum_probs=15.6
Q ss_pred eEEEecCCceeEEEEEe
Q 030315 23 HLALDIGGSLIKVVYFL 39 (179)
Q Consensus 23 ~~aiDIGGTL~KlVYf~ 39 (179)
.+|||||+|-+|.+-+.
T Consensus 6 ~lgIDiGtts~K~~l~d 22 (504)
T 3ll3_A 6 IIGMDVGTTATKGVLYD 22 (504)
T ss_dssp EEEEEECSSEEEEEEEE
T ss_pred EEEEEecCCceEEEEEc
Confidence 68999999999998877
No 54
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=60.94 E-value=65 Score=26.78 Aligned_cols=40 Identities=15% Similarity=0.024 Sum_probs=30.9
Q ss_pred eEEEE-ecCchH-------hhHHHHHHHhCCCcceeehhhHHHHhHHH
Q 030315 101 TLIKA-TGGGAY-------KFADLIKEKLGVVLDKEDEMDCLVTGANF 140 (179)
Q Consensus 101 ~~i~a-TGGGA~-------Kf~dl~~~~lgv~~~k~DEMecLI~Gl~f 140 (179)
..|.+ +|=|.+ .++.-+...+++++..+++++|.+.+..+
T Consensus 70 d~Ia~~~GPG~~~~lrvg~~~ak~la~~~~~pl~~v~h~~aHa~~a~~ 117 (330)
T 2ivn_A 70 DVIAFSQGPGLGPALRVVATAARALAVKYRKPIVGVNHCIAHVEITKM 117 (330)
T ss_dssp CEEEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHGGGG
T ss_pred cEEEEECCCCchHHHHHHHHHHHHHHHHcCCCEEeeCcHHHHHHHHhh
Confidence 34544 577755 56777777788999999999999999866
No 55
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=60.56 E-value=23 Score=29.45 Aligned_cols=42 Identities=17% Similarity=0.150 Sum_probs=33.8
Q ss_pred ceEEEEecCchHh--hHHHHHHHhCCCcce-eehhhHHHHhHHHH
Q 030315 100 KTLIKATGGGAYK--FADLIKEKLGVVLDK-EDEMDCLVTGANFL 141 (179)
Q Consensus 100 ~~~i~aTGGGA~K--f~dl~~~~lgv~~~k-~DEMecLI~Gl~fL 141 (179)
...|.+|||+|.- +.+.+++.++.++.. .+-.+|+..|+-.+
T Consensus 334 i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~ 378 (383)
T 1dkg_D 334 IDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQ 378 (383)
T ss_dssp CCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHH
T ss_pred CCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHH
Confidence 4679999999965 899999999976654 55678999998764
No 56
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=60.03 E-value=60 Score=25.36 Aligned_cols=19 Identities=21% Similarity=0.186 Sum_probs=16.3
Q ss_pred CCeEEEecCCceeEEEEEe
Q 030315 21 ISHLALDIGGSLIKVVYFL 39 (179)
Q Consensus 21 ~~~~aiDIGGTL~KlVYf~ 39 (179)
-..+|||||.+.+|+|.+.
T Consensus 28 ~~~~gIDiGS~s~k~vi~~ 46 (272)
T 3h1q_A 28 PYKVGVDLGTADIVLVVTD 46 (272)
T ss_dssp CCEEEEECCSSEEEEEEEC
T ss_pred CEEEEEEcccceEEEEEEC
Confidence 3578999999999999854
No 57
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=59.49 E-value=23 Score=29.65 Aligned_cols=43 Identities=23% Similarity=0.315 Sum_probs=34.7
Q ss_pred ceEEEEecCchH--hhHHHHHHHh-CCCcce-eehhhHHHHhHHHHH
Q 030315 100 KTLIKATGGGAY--KFADLIKEKL-GVVLDK-EDEMDCLVTGANFLL 142 (179)
Q Consensus 100 ~~~i~aTGGGA~--Kf~dl~~~~l-gv~~~k-~DEMecLI~Gl~fLL 142 (179)
...|.+|||+|. ...+.+++.+ +.++.. .+=.+|++.|+-..-
T Consensus 352 i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a 398 (404)
T 3i33_A 352 IQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQA 398 (404)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHH
T ss_pred CCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHH
Confidence 467999999994 6899999999 677655 477789999988754
No 58
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=58.56 E-value=11 Score=32.29 Aligned_cols=103 Identities=10% Similarity=0.094 Sum_probs=58.4
Q ss_pred CCCCeEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCCeEEEE-Eeecc--CHHHHHHHHHh---hhhhcccccc
Q 030315 19 SQISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFA-KFETS--KIIDCLEFIRS---KNLHLAGFRH 92 (179)
Q Consensus 19 ~~~~~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G~LhF~-kFeT~--~i~~~i~fik~---~~l~~~~~~~ 92 (179)
+.-..+|+|||||-++++-+. .. ..+.-. ++++. ..+++++.|.+ ....... .+
T Consensus 7 d~~~~lgiDIGgt~i~~~l~d-~G------------------~il~~~~~~~~~~~~~~~~l~~i~~~~~~i~~~~~-~~ 66 (366)
T 3mcp_A 7 DNRIVMTLDAGGTNFVFSAIQ-GG------------------KEIADPVVLPACADCLDKCLGNLVEGFKAIQAGLP-EA 66 (366)
T ss_dssp CCCEEEEEECSSSEEEEEEEE-TT------------------EECSCCEEEECCTTCHHHHHHHHHHHHHHHHTTCS-SC
T ss_pred CCCEEEEEEECcceEEEEEEE-CC------------------EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhh-cC
Confidence 345679999999999999865 21 111112 45554 56777776655 2111100 00
Q ss_pred c-------CCCC-CCceEEE-EecC-c---hHhhHHHHHHHhCCCcceeehhhHHHHhHHHH
Q 030315 93 H-------DASA-SDKTLIK-ATGG-G---AYKFADLIKEKLGVVLDKEDEMDCLVTGANFL 141 (179)
Q Consensus 93 ~-------~~~~-~~~~~i~-aTGG-G---A~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fL 141 (179)
. .++- .....+. ++-= + -+-..+.|++++++++..+.+..|...|-.++
T Consensus 67 i~gIGIavPG~Vd~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g~PV~veNDanaaAlgE~~~ 128 (366)
T 3mcp_A 67 PVAISFAFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFGIPVFINNDGSLFAYGEALT 128 (366)
T ss_dssp CCEEEEECCSSEETTTTEECCCTTCGGGTTCBCHHHHHHHHHCSCEEEECHHHHHHHHHHHT
T ss_pred CeEEEEEecceEeCCCCEEEeCCCcccccCCCCHHHHHHHHHCCCEEEechhhHHHHHHHHh
Confidence 0 0000 0011121 1110 1 13456889999999999999999999887664
No 59
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=57.68 E-value=7.9 Score=34.44 Aligned_cols=18 Identities=22% Similarity=0.325 Sum_probs=16.2
Q ss_pred CeEEEecCCceeEEEEEe
Q 030315 22 SHLALDIGGSLIKVVYFL 39 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~ 39 (179)
..+|||||+|-+|.+-+.
T Consensus 8 ~~lgIDiGtts~k~~l~d 25 (508)
T 3ifr_A 8 QVIGLDIGTTSTIAILVR 25 (508)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred EEEEEEecCcceEEEEEC
Confidence 468999999999999877
No 60
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=57.42 E-value=48 Score=24.62 Aligned_cols=94 Identities=21% Similarity=0.184 Sum_probs=54.3
Q ss_pred CeEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCCeEEEEEeeccCHHHHHHHHHhhhhhcccccccCCCCCCce
Q 030315 22 SHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSKIIDCLEFIRSKNLHLAGFRHHDASASDKT 101 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G~LhF~kFeT~~i~~~i~fik~~~l~~~~~~~~~~~~~~~~ 101 (179)
..+|||.|-.-+=|+-..+.... ..+-.++....+ ...++...+++++.... ..
T Consensus 4 ~iLglD~G~kriGvAvsd~~~~~------------A~pl~ti~~~~~-~~~~~~l~~li~e~~v~-------------~i 57 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRITGT------------ARPLPAIKAQDG-TPDWNIIERLLKEWQPD-------------EI 57 (138)
T ss_dssp EEEEEECCSSEEEEEEEETTTTE------------EEEEEEEEEETT-EECHHHHHHHHHHHCCS-------------EE
T ss_pred eEEEEEeCCCEEEEEEEcCCCCE------------EeeEEEEEcCCc-chHHHHHHHHHHHcCCC-------------EE
Confidence 36899999999999995532110 001223332211 23577788888765311 11
Q ss_pred EEEE----ecCc------hHhhHHHHHHHhCCCcceeehhhHHHHhHHHH
Q 030315 102 LIKA----TGGG------AYKFADLIKEKLGVVLDKEDEMDCLVTGANFL 141 (179)
Q Consensus 102 ~i~a----TGGG------A~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fL 141 (179)
+|-. -|-- +.+|.+.+++.+++++.-.||--+.+.--..|
T Consensus 58 VvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DERlTT~~A~~~l 107 (138)
T 1nu0_A 58 IVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGL 107 (138)
T ss_dssp EEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC----
T ss_pred EEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcCHHHHHHHH
Confidence 1111 1222 26899999999999999999976555443333
No 61
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=57.23 E-value=25 Score=31.31 Aligned_cols=17 Identities=29% Similarity=0.430 Sum_probs=15.7
Q ss_pred eEEEecCCceeEEEEEe
Q 030315 23 HLALDIGGSLIKVVYFL 39 (179)
Q Consensus 23 ~~aiDIGGTL~KlVYf~ 39 (179)
.+|||||+|-+|++-+.
T Consensus 28 ~lgIDiGtts~k~~l~d 44 (520)
T 4e1j_A 28 ILAIDQGTTSTRAIVFD 44 (520)
T ss_dssp EEEEEECSSEEEEEEEC
T ss_pred EEEEEeCCcceEEEEEC
Confidence 69999999999998877
No 62
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=57.07 E-value=17 Score=32.73 Aligned_cols=43 Identities=12% Similarity=0.099 Sum_probs=32.4
Q ss_pred ceEEEEecCch---HhhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 100 KTLIKATGGGA---YKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 100 ~~~i~aTGGGA---~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
...|.++|||| --+..++.+.+|+++.+...-|+...|.-++-
T Consensus 440 ~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA 485 (572)
T 3jvp_A 440 VHELYACGGLPQKNHLLMQIFADVTNREIKVAASKQTPALGAAMFA 485 (572)
T ss_dssp EEEEEEESSHHHHCHHHHHHHHHHHTSCEEEBCCSSHHHHHHHHHH
T ss_pred cCEEEEEcCchhhCHHHHHHHHHHHCCeeEecCCCccHHHHHHHHH
Confidence 46799999999 23566777889999987766667677776654
No 63
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=53.90 E-value=7.8 Score=34.00 Aligned_cols=18 Identities=28% Similarity=0.303 Sum_probs=15.8
Q ss_pred eEEEecCCceeEEEEEee
Q 030315 23 HLALDIGGSLIKVVYFLR 40 (179)
Q Consensus 23 ~~aiDIGGTL~KlVYf~~ 40 (179)
.+|||||+|-+|.+-+..
T Consensus 6 ~lgiDiGtts~k~~l~d~ 23 (489)
T 2uyt_A 6 CVAVDLGASSGRVMLARY 23 (489)
T ss_dssp EEEEEECSSEEEEEEEEE
T ss_pred EEEEEecCCCceEEEEEe
Confidence 689999999999988773
No 64
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=52.99 E-value=33 Score=30.63 Aligned_cols=18 Identities=17% Similarity=0.285 Sum_probs=16.1
Q ss_pred CeEEEecCCceeEEEEEe
Q 030315 22 SHLALDIGGSLIKVVYFL 39 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~ 39 (179)
..+|||+|+|-+|.+-+.
T Consensus 6 ~~lgIDiGtts~ka~l~d 23 (554)
T 3l0q_A 6 YFIGVDVGTGSARAGVFD 23 (554)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred EEEEEEECcccEEEEEEC
Confidence 468999999999998877
No 65
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=52.98 E-value=32 Score=30.44 Aligned_cols=18 Identities=22% Similarity=0.194 Sum_probs=16.0
Q ss_pred CeEEEecCCceeEEEEEe
Q 030315 22 SHLALDIGGSLIKVVYFL 39 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~ 39 (179)
..+|||||+|-+|.+-+.
T Consensus 6 ~~lgIDiGtts~k~~l~d 23 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALAD 23 (511)
T ss_dssp EEEEEEECSSEEEEEEEC
T ss_pred EEEEEEeCCCceEEEEEC
Confidence 368999999999998877
No 66
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=52.06 E-value=18 Score=32.08 Aligned_cols=18 Identities=28% Similarity=0.237 Sum_probs=16.1
Q ss_pred CeEEEecCCceeEEEEEe
Q 030315 22 SHLALDIGGSLIKVVYFL 39 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~ 39 (179)
..+|||+|+|-+|.+-+.
T Consensus 4 ~~lgIDiGtts~k~~l~d 21 (510)
T 2p3r_A 4 YIVALDQGTTSSRAVVMD 21 (510)
T ss_dssp EEEEEEECSSEEEEEEEC
T ss_pred EEEEEEcCCcceEEEEEC
Confidence 368999999999999877
No 67
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=51.50 E-value=19 Score=31.77 Aligned_cols=18 Identities=22% Similarity=0.364 Sum_probs=16.1
Q ss_pred CeEEEecCCceeEEEEEe
Q 030315 22 SHLALDIGGSLIKVVYFL 39 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~ 39 (179)
..+|||+|+|-+|.+-+.
T Consensus 7 ~~lgIDiGtts~k~~l~d 24 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFN 24 (501)
T ss_dssp EEEEEEECSSEEEEEEEC
T ss_pred EEEEEEeCccceEEEEEc
Confidence 368999999999999877
No 68
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=51.38 E-value=52 Score=24.14 Aligned_cols=100 Identities=13% Similarity=0.034 Sum_probs=55.0
Q ss_pred CCCCeEEEecCCceeE-EEEEeecCCCCCCCCCCCCCCCCCCCCeEEEEEeeccCHHHHHHHHHhhhhhcccccccCCCC
Q 030315 19 SQISHLALDIGGSLIK-VVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSKIIDCLEFIRSKNLHLAGFRHHDASA 97 (179)
Q Consensus 19 ~~~~~~aiDIGGTL~K-lVYf~~~~~~~~~~~~~g~~~~~~~~G~LhF~kFeT~~i~~~i~fik~~~l~~~~~~~~~~~~ 97 (179)
..+..+.+|+-|||+- -.|+. ..+++ ...|... -.++++.+++++
T Consensus 6 ~~ik~i~~DlDGTL~~~~~~~~-------------------~~~~~-~~~~~~~-~~~~l~~L~~~G------------- 51 (180)
T 1k1e_A 6 ENIKFVITDVDGVLTDGQLHYD-------------------ANGEA-IKSFHVR-DGLGIKMLMDAD------------- 51 (180)
T ss_dssp GGCCEEEEECTTTTSCSEEEEE-------------------TTEEE-EEEEEHH-HHHHHHHHHHTT-------------
T ss_pred hCCeEEEEeCCCCcCCCCeeec-------------------cCcce-eeeeccc-hHHHHHHHHHCC-------------
Confidence 3467899999999984 33433 12322 2334332 246777777654
Q ss_pred CCceEEEEecCchHhhHHHHHHHhCCCcceeehhhHHHHhHHHHHHh--c-CCccEEEecCC
Q 030315 98 SDKTLIKATGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKF--I-KKLLLMWMVRR 156 (179)
Q Consensus 98 ~~~~~i~aTGGGA~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL~~--i-~~E~Fty~~~~ 156 (179)
...+.+||.... ....+.+.+|+.- ..+....=-.++..+++. + +.++..+-+..
T Consensus 52 --~~~~i~Tg~~~~-~~~~~~~~lgl~~-~~~~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~ 109 (180)
T 1k1e_A 52 --IQVAVLSGRDSP-ILRRRIADLGIKL-FFLGKLEKETACFDLMKQAGVTAEQTAYIGDDS 109 (180)
T ss_dssp --CEEEEEESCCCH-HHHHHHHHHTCCE-EEESCSCHHHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred --CeEEEEeCCCcH-HHHHHHHHcCCce-eecCCCCcHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 356788877544 4555556777642 122222223344455543 2 46777776543
No 69
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=51.07 E-value=21 Score=31.64 Aligned_cols=18 Identities=22% Similarity=0.338 Sum_probs=16.2
Q ss_pred CeEEEecCCceeEEEEEe
Q 030315 22 SHLALDIGGSLIKVVYFL 39 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~ 39 (179)
..+|||||+|-+|.+-+.
T Consensus 6 ~~lgIDiGtts~k~~l~d 23 (506)
T 3h3n_X 6 YVMAIDQGTTSSRAIIFD 23 (506)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred EEEEEEcCCCceEEEEEC
Confidence 468999999999999887
No 70
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=50.73 E-value=23 Score=26.27 Aligned_cols=18 Identities=33% Similarity=0.349 Sum_probs=12.4
Q ss_pred CCCCCeEEEecCCceeEE
Q 030315 18 ESQISHLALDIGGSLIKV 35 (179)
Q Consensus 18 ~~~~~~~aiDIGGTL~Kl 35 (179)
...+..+.+|.-|||++-
T Consensus 11 ~~~~k~~~~D~Dgtl~~~ 28 (176)
T 2fpr_A 11 GSSQKYLFIDRDGTLISE 28 (176)
T ss_dssp --CCEEEEECSBTTTBCC
T ss_pred CCcCcEEEEeCCCCeEcC
Confidence 456777888888888765
No 71
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=50.68 E-value=14 Score=32.50 Aligned_cols=43 Identities=14% Similarity=0.181 Sum_probs=34.9
Q ss_pred ceEEEEecCchH--hhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 100 KTLIKATGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 100 ~~~i~aTGGGA~--Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
...|.++||||. -+..++.+.+|+++.+.+.-|+-..|.-++-
T Consensus 394 ~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~lA 438 (497)
T 2zf5_O 394 IKELRVDGGATANDFLMQFQADILNRKVIRPVVKETTALGAAYLA 438 (497)
T ss_dssp CCCEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHH
T ss_pred cceEEEeCccccCHHHHHHHHhhcCCeEEEcCCCcchHHHHHHHH
Confidence 356999999997 6888888999999988776667777887765
No 72
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=49.56 E-value=24 Score=29.09 Aligned_cols=42 Identities=24% Similarity=0.181 Sum_probs=28.6
Q ss_pred ceEEEEecCchHhhHHHHHHHhCCCcceeehhhHHHHhHHHHHHhcCCc
Q 030315 100 KTLIKATGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKFIKKL 148 (179)
Q Consensus 100 ~~~i~aTGGGA~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL~~i~~E 148 (179)
..++.+|||.|..+... + .....|+. =+.+|+..+.+....|
T Consensus 218 ~~~vi~TGG~a~~l~~~-~-----~~~~~~~~-LvL~GL~~i~~~n~~~ 259 (266)
T 3djc_A 218 QILILATGGFASLFDKQ-G-----LYDHLVPD-LVLQGIRLAAMMNTAE 259 (266)
T ss_dssp CEEEEEESTTGGGGTTT-T-----CCSEECTT-HHHHHHHHHHHTTC--
T ss_pred CCEEEEECCChHHhccC-C-----CCCEECcC-hHHHHHHHHHHhhccc
Confidence 46899999999977765 3 23344543 6789999988654443
No 73
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=48.89 E-value=16 Score=32.74 Aligned_cols=22 Identities=32% Similarity=0.519 Sum_probs=19.1
Q ss_pred CCCCCeEEEecCCceeEEEEEe
Q 030315 18 ESQISHLALDIGGSLIKVVYFL 39 (179)
Q Consensus 18 ~~~~~~~aiDIGGTL~KlVYf~ 39 (179)
.+.-..+|||+|||-.+++...
T Consensus 56 ~E~G~~LAlDlGGTn~RV~~V~ 77 (445)
T 3hm8_A 56 SERGDFLALDLGGTNFRVLLVR 77 (445)
T ss_dssp CCCEEEEEEEESSSSEEEEEEE
T ss_pred ceeeEEEEEEecCCeEEEEEEE
Confidence 4556789999999999999977
No 74
>1v8d_A Hypothetical protein (TT1679); X-RAY craytallography, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.16A {Thermus thermophilus} SCOP: c.140.1.1
Probab=48.47 E-value=5.6 Score=32.74 Aligned_cols=12 Identities=58% Similarity=0.908 Sum_probs=10.9
Q ss_pred eEEEecCCceeE
Q 030315 23 HLALDIGGSLIK 34 (179)
Q Consensus 23 ~~aiDIGGTL~K 34 (179)
+-|||||.||+-
T Consensus 168 ~AGIDIGdTlIG 179 (235)
T 1v8d_A 168 HGGMDIGGVLIG 179 (235)
T ss_dssp SEEEEESSCCCG
T ss_pred cCCcccccceee
Confidence 899999999974
No 75
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=48.44 E-value=16 Score=35.27 Aligned_cols=22 Identities=32% Similarity=0.504 Sum_probs=19.4
Q ss_pred CCCCCeEEEecCCceeEEEEEe
Q 030315 18 ESQISHLALDIGGSLIKVVYFL 39 (179)
Q Consensus 18 ~~~~~~~aiDIGGTL~KlVYf~ 39 (179)
.+.-..+|||+|||-.+++-+.
T Consensus 523 ~E~G~~lalDlGGTn~Rv~~V~ 544 (917)
T 1cza_N 523 TENGDFLALDLGGTNFRVLLVK 544 (917)
T ss_dssp CCCEEEEEEEESSSSEEEEEEE
T ss_pred CcceEEEEEEECCCcEEEEEEE
Confidence 4566789999999999999987
No 76
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=48.41 E-value=22 Score=31.04 Aligned_cols=42 Identities=26% Similarity=0.327 Sum_probs=33.1
Q ss_pred eEEEEecCchH--hhHHHHHHHhCCCcceeehhhH-HHHhHHHHH
Q 030315 101 TLIKATGGGAY--KFADLIKEKLGVVLDKEDEMDC-LVTGANFLL 142 (179)
Q Consensus 101 ~~i~aTGGGA~--Kf~dl~~~~lgv~~~k~DEMec-LI~Gl~fLL 142 (179)
..|.++||||. -+.+++.+.+|+++...+.-++ ...|.-++-
T Consensus 388 ~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~lA 432 (484)
T 2itm_A 388 QSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLA 432 (484)
T ss_dssp SCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHHH
T ss_pred ceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHHH
Confidence 56999999997 6788888899999988776664 566776654
No 77
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=47.98 E-value=28 Score=28.58 Aligned_cols=39 Identities=26% Similarity=0.231 Sum_probs=28.2
Q ss_pred ceEEEEecCchHhhHHHHHHHhCCCcceeehhhHHHHhHHHHHHh
Q 030315 100 KTLIKATGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKF 144 (179)
Q Consensus 100 ~~~i~aTGGGA~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL~~ 144 (179)
..+|.+|||.|..++..++ .....|+ +=+.+|+..+.+.
T Consensus 214 ~~~vi~TGG~a~~l~~~~~-----~~~~~~~-~LvL~GL~~i~~~ 252 (268)
T 2h3g_X 214 EPKVIATGGLAKLISEESN-----VIDVVDP-FLTLKGLYMLYER 252 (268)
T ss_dssp CCEEEEESTTHHHHHHHCS-----SCSEECT-THHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHhhCC-----CCCEECc-chHHHHHHHHHHh
Confidence 4679999999998876654 2345555 4567899988864
No 78
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=47.71 E-value=21 Score=29.30 Aligned_cols=16 Identities=25% Similarity=0.356 Sum_probs=14.7
Q ss_pred CeEEEecCCceeEEEE
Q 030315 22 SHLALDIGGSLIKVVY 37 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVY 37 (179)
+.+|||.|-|-+|+++
T Consensus 1 m~igiD~G~sntK~~~ 16 (320)
T 2zgy_A 1 MLVFIDDGSTNIKLQW 16 (320)
T ss_dssp CEEEEEECSSEEEEEE
T ss_pred CeEEEecCCccceEEE
Confidence 4689999999999998
No 79
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=46.66 E-value=14 Score=33.31 Aligned_cols=18 Identities=17% Similarity=0.172 Sum_probs=16.3
Q ss_pred CeEEEecCCceeEEEEEe
Q 030315 22 SHLALDIGGSLIKVVYFL 39 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~ 39 (179)
..+|||+|+|-+|.+-+.
T Consensus 6 ~~lgIDiGTts~Ka~l~d 23 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLID 23 (572)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred EEEEEecCCcceEEEEEE
Confidence 469999999999999887
No 80
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=45.81 E-value=32 Score=30.74 Aligned_cols=43 Identities=19% Similarity=0.322 Sum_probs=32.6
Q ss_pred ceEEEEecCchH--hhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 100 KTLIKATGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 100 ~~~i~aTGGGA~--Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
...|.++||||- -+..++.+.+|+++.+.+.-|+...|.-++-
T Consensus 443 ~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~~~~e~~alGAA~lA 487 (554)
T 3l0q_A 443 IDTMMASGGGTKNPIFVQEHANATGCAMLLPEESEAMLLGSAMMG 487 (554)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHHCCEEEEESCSCHHHHHHHHHH
T ss_pred CCEEEEeCccccCHHHHHHHHHhhCCeEEecCCCcchHHHHHHHH
Confidence 467999999984 3455667778999988776677777877765
No 81
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=45.47 E-value=92 Score=23.20 Aligned_cols=87 Identities=16% Similarity=0.155 Sum_probs=53.1
Q ss_pred CeEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCCeEE-EEEeecc------CHHHHHHHHHhhhhhcccccccC
Q 030315 22 SHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLH-FAKFETS------KIIDCLEFIRSKNLHLAGFRHHD 94 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G~Lh-F~kFeT~------~i~~~i~fik~~~l~~~~~~~~~ 94 (179)
..+|||.|-.-++++-..+. +.... ...+.+. ..+...+++++..
T Consensus 4 riLGiDpG~~riGvAv~d~~------------------g~~a~p~~~I~~~~~r~~~~~~~l~~li~~~~---------- 55 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDEM------------------GWTAQGIETIKINEAEGDYGLSRLSELIKDYT---------- 55 (150)
T ss_dssp EEEEEEECSSEEEEEEECTT------------------SSSEEEEEEEECBGGGTBCCHHHHHHHHTTSE----------
T ss_pred EEEEEEccCCEEEEEEEECC------------------CCEEeeEEEEEcCCcchHHHHHHHHHHHHHcC----------
Confidence 47999999999999995521 11222 2333322 3455555654432
Q ss_pred CCCCCceEEEEec-------------CchHhhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 95 ASASDKTLIKATG-------------GGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 95 ~~~~~~~~i~aTG-------------GGA~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
....+-| +-|.+|...+...+++++..+||--+.+.--..|.
T Consensus 56 ------~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts~~Ak~~l~ 110 (150)
T 1vhx_A 56 ------IDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTTMAAEKMLI 110 (150)
T ss_dssp ------EEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCHHHHHHHHH
T ss_pred ------CCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCHHHHHHHHH
Confidence 2223333 22367888888888999999999776665544443
No 82
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=44.41 E-value=92 Score=22.96 Aligned_cols=100 Identities=17% Similarity=0.131 Sum_probs=53.9
Q ss_pred CCCCeEEEecCCceeE-EEEEeecCCCCCCCCCCCCCCCCCCCCeEEEEEeeccCHHHHHHHHHhhhhhcccccccCCCC
Q 030315 19 SQISHLALDIGGSLIK-VVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSKIIDCLEFIRSKNLHLAGFRHHDASA 97 (179)
Q Consensus 19 ~~~~~~aiDIGGTL~K-lVYf~~~~~~~~~~~~~g~~~~~~~~G~LhF~kFeT~~i~~~i~fik~~~l~~~~~~~~~~~~ 97 (179)
..+..+.+|+.|||+. -.|+.+ .+.. ...|...+ ...++.+++.+
T Consensus 24 ~~ik~vifD~DGTL~~~~~~~~~-------------------~~~~-~~~~~~~d-~~~l~~L~~~g------------- 69 (188)
T 2r8e_A 24 ENIRLLILDVDGVLSDGLIYMGN-------------------NGEE-LKAFNVRD-GYGIRCALTSD------------- 69 (188)
T ss_dssp HTCSEEEECCCCCCBCSEEEEET-------------------TSCE-EEEEEHHH-HHHHHHHHTTT-------------
T ss_pred hcCCEEEEeCCCCcCCCCEEecC-------------------CCcE-EEEeeccc-HHHHHHHHHCC-------------
Confidence 4578899999999985 455552 2221 12333222 23667776543
Q ss_pred CCceEEEEecCchHhhHHHHHHHhCCCcceeehhhHHHHhHHHHHHh--c-CCccEEEecCC
Q 030315 98 SDKTLIKATGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKF--I-KKLLLMWMVRR 156 (179)
Q Consensus 98 ~~~~~i~aTGGGA~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL~~--i-~~E~Fty~~~~ 156 (179)
...+.+||+... ..+.+.+.+|+.- ..+.-..=...+..+++. + +.++..+-+..
T Consensus 70 --~~v~ivT~~~~~-~~~~~l~~lgl~~-~~~~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~ 127 (188)
T 2r8e_A 70 --IEVAIITGRKAK-LVEDRCATLGITH-LYQGQSNKLIAFSDLLEKLAIAPENVAYVGDDL 127 (188)
T ss_dssp --CEEEEECSSCCH-HHHHHHHHHTCCE-EECSCSCSHHHHHHHHHHHTCCGGGEEEEESSG
T ss_pred --CeEEEEeCCChH-HHHHHHHHcCCce-eecCCCCCHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 356788987654 4445556777642 112111113344445543 2 46777776543
No 83
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=43.04 E-value=43 Score=29.75 Aligned_cols=44 Identities=25% Similarity=0.265 Sum_probs=33.3
Q ss_pred ceEEEEecCchH--hhHHHHHHHhCCCcceeehhhHHHHhHHHHHH
Q 030315 100 KTLIKATGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLLK 143 (179)
Q Consensus 100 ~~~i~aTGGGA~--Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL~ 143 (179)
...|.++||||. -+.+++.+.+|+++.+...-|+...|.-++-.
T Consensus 425 ~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~~~e~~alGAA~lA~ 470 (515)
T 3i8b_A 425 ITRILLIGGGAKSEAIRTLAPSILGMDVTRPATDEYVAIGAARQAA 470 (515)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHHTSCEEEECCCCHHHHHHHHHHH
T ss_pred CCEEEEECchhcCHHHHHHHHHHhCCceEecCCcccHHHHHHHHHH
Confidence 357999999984 23455667789999887777777888887764
No 84
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=41.57 E-value=16 Score=30.35 Aligned_cols=20 Identities=15% Similarity=0.222 Sum_probs=17.2
Q ss_pred CCeEEEecCCceeEEEEEee
Q 030315 21 ISHLALDIGGSLIKVVYFLR 40 (179)
Q Consensus 21 ~~~~aiDIGGTL~KlVYf~~ 40 (179)
-..+|||+|.|.+|++|+.+
T Consensus 18 ~~viGID~GTt~s~va~~~~ 37 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKN 37 (394)
T ss_dssp CSCEEEEECSSEEEEEEECS
T ss_pred CCEEEEEeCcCcEEEEEEEC
Confidence 35699999999999999763
No 85
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=41.27 E-value=16 Score=32.64 Aligned_cols=18 Identities=17% Similarity=-0.095 Sum_probs=16.1
Q ss_pred CeEEEecCCceeEEEEEe
Q 030315 22 SHLALDIGGSLIKVVYFL 39 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~ 39 (179)
..+|||||+|-+|.+-+.
T Consensus 6 ~~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 6 LVAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred EEEEEEeccccEEEEEEE
Confidence 469999999999998876
No 86
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=41.20 E-value=41 Score=29.81 Aligned_cols=43 Identities=16% Similarity=0.346 Sum_probs=34.0
Q ss_pred ceEEEEecCchH--hhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 100 KTLIKATGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 100 ~~~i~aTGGGA~--Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
..+|.++||||- -+..++.+.+|+++.+.+.-|+...|.-++-
T Consensus 403 ~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~~~~E~~alGAA~lA 447 (526)
T 3ezw_A 403 LHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLA 447 (526)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHH
T ss_pred CCEEEEECchhhCHHHHHHHHHHHCCEEEeCCCCchHHHHHHHHH
Confidence 468999999984 3556667788999988877788888888775
No 87
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=40.08 E-value=28 Score=28.14 Aligned_cols=37 Identities=22% Similarity=0.204 Sum_probs=25.6
Q ss_pred ceEEEEecCchHhhHHHHHHHhCCCcceeehhhHHHHhHHHHHH
Q 030315 100 KTLIKATGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLK 143 (179)
Q Consensus 100 ~~~i~aTGGGA~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL~ 143 (179)
..++.+|||.|..++. ++ .....|+ +=+.+|+..+.+
T Consensus 211 ~~~vi~TGG~a~~l~~-~~-----~~~~~~~-~L~l~GL~~i~~ 247 (249)
T 3bex_A 211 DLPVVLTGGQSKIVKD-MI-----KHEIFDE-DLTIKGVYHFCF 247 (249)
T ss_dssp CCCEEEESTTSGGGGG-GS-----CCSEECT-THHHHHHHHHHH
T ss_pred CCEEEEECCChHHHhc-CC-----CCcEECc-CcHHHHHHHHHh
Confidence 3578999999998876 43 3345555 346678877654
No 88
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=38.74 E-value=53 Score=29.01 Aligned_cols=44 Identities=14% Similarity=0.137 Sum_probs=32.8
Q ss_pred ceEEEEecCchH--hhHHHHHHHhCCCcceeehhhHHHHhHHHHHH
Q 030315 100 KTLIKATGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLLK 143 (179)
Q Consensus 100 ~~~i~aTGGGA~--Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL~ 143 (179)
...|.++||||. -+.+++.+.+|+++.+...-|+...|.-++-.
T Consensus 401 ~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~ 446 (508)
T 3ifr_A 401 PQRFFASDGGTRSRVWMGIMADVLQRPVQLLANPLGSAVGAAWVAA 446 (508)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHHTSCEEEEECCSTHHHHHHHHHH
T ss_pred CCEEEEeCCcccCHHHHHHHHHHhCCeEEecCCCCchHHHHHHHHH
Confidence 357999999984 23455567789999887767777788887753
No 89
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=35.68 E-value=62 Score=28.51 Aligned_cols=44 Identities=25% Similarity=0.188 Sum_probs=33.3
Q ss_pred ceEEEEecCchH--hhHHHHHHHhCCCcceeehhhHHHHhHHHHHH
Q 030315 100 KTLIKATGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLLK 143 (179)
Q Consensus 100 ~~~i~aTGGGA~--Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL~ 143 (179)
...|.++||||- -+..++.+.+|+++.+.+.-|+...|.-++-.
T Consensus 394 ~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~ 439 (504)
T 3ll3_A 394 PVAINATGGFLKSDFVRQLCANIFNVPIVTMKEQQSGTLAAMFLAR 439 (504)
T ss_dssp CSEEEEESGGGCSHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHH
T ss_pred CCEEEEeCchhcCHHHHHHHHHhhCCeEEecCCCCchhHHHHHHHH
Confidence 467999999984 24455667789999887777777888887763
No 90
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=33.97 E-value=28 Score=30.92 Aligned_cols=18 Identities=28% Similarity=0.237 Sum_probs=15.9
Q ss_pred CeEEEecCCceeEEEEEe
Q 030315 22 SHLALDIGGSLIKVVYFL 39 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~ 39 (179)
--+|||+|.|.+|.+-|.
T Consensus 5 YvlgID~GTss~Ka~l~d 22 (526)
T 3ezw_A 5 YIVALDQGTTSSRAVVMD 22 (526)
T ss_dssp EEEEEEECSSEEEEEEEC
T ss_pred EEEEEEccccceeeeEEc
Confidence 458999999999988877
No 91
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=33.53 E-value=44 Score=28.94 Aligned_cols=29 Identities=24% Similarity=0.281 Sum_probs=23.4
Q ss_pred eEEEEecCchH--hhHHHHHHHhCCCcceee
Q 030315 101 TLIKATGGGAY--KFADLIKEKLGVVLDKED 129 (179)
Q Consensus 101 ~~i~aTGGGA~--Kf~dl~~~~lgv~~~k~D 129 (179)
..|.+|||||. ...+++++.||+++....
T Consensus 330 ~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~ 360 (419)
T 4a2a_A 330 GGVVLTGGGAKIPRINELATEVFKSPVRTGC 360 (419)
T ss_dssp TCEEEESGGGGSTTHHHHHHHHHTSCEEECC
T ss_pred CEEEEECchhchhhHHHHHHHHHCCCeEEEe
Confidence 46999999995 578999999998775443
No 92
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=33.09 E-value=78 Score=27.82 Aligned_cols=43 Identities=21% Similarity=0.226 Sum_probs=34.2
Q ss_pred ceEEEEecCchHh--hHHHHHHHhCCCcce-eehhhHHHHhHHHHH
Q 030315 100 KTLIKATGGGAYK--FADLIKEKLGVVLDK-EDEMDCLVTGANFLL 142 (179)
Q Consensus 100 ~~~i~aTGGGA~K--f~dl~~~~lgv~~~k-~DEMecLI~Gl~fLL 142 (179)
...|.++||++.- ..+.+++.+|.++.+ .+=.+|+..|+-..-
T Consensus 303 i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a 348 (509)
T 2v7y_A 303 IDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQG 348 (509)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHH
T ss_pred CcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHH
Confidence 4679999999985 889999999976543 566788899987754
No 93
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=32.31 E-value=67 Score=28.45 Aligned_cols=44 Identities=16% Similarity=0.256 Sum_probs=32.0
Q ss_pred ceEEEEecCchH--hhHHHHHHHhCCCcceeehhhHHHHhHHHHHH
Q 030315 100 KTLIKATGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLLK 143 (179)
Q Consensus 100 ~~~i~aTGGGA~--Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL~ 143 (179)
...|.++||||. -+.+++.+.+|+++.+.+.-|+...|.-++-.
T Consensus 426 ~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~~~e~~alGAA~lA~ 471 (520)
T 4e1j_A 426 DTVLRVDGGMVASDWTMQRLSDLLDAPVDRPVILETTALGVAWLAG 471 (520)
T ss_dssp -CCEEEESGGGGCHHHHHHHHHHHTSCEEEESCCCHHHHHHHHHHH
T ss_pred cceEEEeCccccCHHHHHHHHHHhCCeEEecCCCccHHHHHHHHHH
Confidence 356999999984 24455667789999887766777778877653
No 94
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=31.92 E-value=1.3e+02 Score=21.09 Aligned_cols=99 Identities=18% Similarity=0.100 Sum_probs=54.6
Q ss_pred CCCeEEEecCCceeEE-EEEeecCCCCCCCCCCCCCCCCCCCCeEEEEEeeccCHHHHHHHHHhhhhhcccccccCCCCC
Q 030315 20 QISHLALDIGGSLIKV-VYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSKIIDCLEFIRSKNLHLAGFRHHDASAS 98 (179)
Q Consensus 20 ~~~~~aiDIGGTL~Kl-VYf~~~~~~~~~~~~~g~~~~~~~~G~LhF~kFeT~~i~~~i~fik~~~l~~~~~~~~~~~~~ 98 (179)
.+..+.+|+-|||+-- +|+.+ .+ -.+..|...+ ...++.+++.+
T Consensus 3 ~ik~vifD~DGTL~~~~~~~~~-------------------~~-~~~~~~~~~~-~~~l~~l~~~g-------------- 47 (164)
T 3e8m_A 3 EIKLILTDIDGVWTDGGMFYDQ-------------------TG-NEWKKFNTSD-SAGIFWAHNKG-------------- 47 (164)
T ss_dssp CCCEEEECSTTTTSSSEEEECS-------------------SS-CEEEEEEGGG-HHHHHHHHHTT--------------
T ss_pred cceEEEEcCCCceEcCcEEEcC-------------------CC-cEEEEecCCh-HHHHHHHHHCC--------------
Confidence 3567899999999862 23231 11 1234454433 34678887764
Q ss_pred CceEEEEecCchHhhHHHHHHHhCCCcceeehhhHHHHhHHHHHHh---cCCccEEEecCC
Q 030315 99 DKTLIKATGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKF---IKKLLLMWMVRR 156 (179)
Q Consensus 99 ~~~~i~aTGGGA~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL~~---i~~E~Fty~~~~ 156 (179)
.....+||+- ....+.+.+.+|+.- ..+....=-..+..+++. -+.++..+-+..
T Consensus 48 -~~~~i~T~~~-~~~~~~~~~~~gl~~-~~~~~kpk~~~~~~~~~~~~~~~~~~~~vGD~~ 105 (164)
T 3e8m_A 48 -IPVGILTGEK-TEIVRRRAEKLKVDY-LFQGVVDKLSAAEELCNELGINLEQVAYIGDDL 105 (164)
T ss_dssp -CCEEEECSSC-CHHHHHHHHHTTCSE-EECSCSCHHHHHHHHHHHHTCCGGGEEEECCSG
T ss_pred -CEEEEEeCCC-hHHHHHHHHHcCCCE-eecccCChHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 3457888764 455666667888642 222222223344444443 256676665543
No 95
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=30.99 E-value=42 Score=29.40 Aligned_cols=42 Identities=26% Similarity=0.396 Sum_probs=32.4
Q ss_pred eEEEEecCchH--hhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 101 TLIKATGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 101 ~~i~aTGGGA~--Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
..|.++||||. -+.+++.+.+|+++.+.+.-|+...|.-++-
T Consensus 400 ~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~~~~e~~alGaA~la 443 (495)
T 2dpn_A 400 KVLKADGGMAQNRLFLKIQADLLGVPVAVPEVTETTALGAALMA 443 (495)
T ss_dssp CCEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHH
T ss_pred cEEEEecccccCHHHHHHHHHHhCCeeEecCCcccHHHHHHHHH
Confidence 56999999984 3566677888999988777677777877664
No 96
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=30.74 E-value=33 Score=28.66 Aligned_cols=21 Identities=19% Similarity=0.371 Sum_probs=17.6
Q ss_pred CCCeEEEecCCceeEEEEEee
Q 030315 20 QISHLALDIGGSLIKVVYFLR 40 (179)
Q Consensus 20 ~~~~~aiDIGGTL~KlVYf~~ 40 (179)
..+.+|||.|.|-++++|+.+
T Consensus 22 ~~~viGID~GTt~s~va~~~~ 42 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQH 42 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEET
T ss_pred cCCEEEEEcCCccEEEEEEEC
Confidence 456799999999999999764
No 97
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=30.63 E-value=33 Score=28.43 Aligned_cols=18 Identities=39% Similarity=0.541 Sum_probs=16.2
Q ss_pred CeEEEecCCceeEEEEEe
Q 030315 22 SHLALDIGGSLIKVVYFL 39 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~ 39 (179)
..+|||||.|-+|+|..+
T Consensus 14 ~~vgiDiGt~~i~~~~~~ 31 (377)
T 2ych_A 14 EALGLEIGASALKLVEVS 31 (377)
T ss_dssp CCEEEEECSSEEEEEEEE
T ss_pred ceEEEEeCCCeEEEEEEe
Confidence 479999999999999975
No 98
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=30.39 E-value=30 Score=29.16 Aligned_cols=18 Identities=11% Similarity=0.095 Sum_probs=16.5
Q ss_pred CCeEEEecCCceeEEEEE
Q 030315 21 ISHLALDIGGSLIKVVYF 38 (179)
Q Consensus 21 ~~~~aiDIGGTL~KlVYf 38 (179)
...+|||+|.|-++++|.
T Consensus 13 ~~vvGIDlGTt~s~va~~ 30 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHT 30 (409)
T ss_dssp CCEEEEEECSSEEEEEEE
T ss_pred CcEEEEEcCCCeEEEEEE
Confidence 468999999999999997
No 99
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=30.24 E-value=61 Score=26.05 Aligned_cols=44 Identities=25% Similarity=0.246 Sum_probs=32.9
Q ss_pred eEEEEecCch--HhhHHHHHHHhCCCcceeehhh-HHHHhHHHHHHh
Q 030315 101 TLIKATGGGA--YKFADLIKEKLGVVLDKEDEMD-CLVTGANFLLKF 144 (179)
Q Consensus 101 ~~i~aTGGGA--~Kf~dl~~~~lgv~~~k~DEMe-cLI~Gl~fLL~~ 144 (179)
..|.++||+| --+.+.|.+.||.++...+.-+ +-..|+-++-..
T Consensus 210 ~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~ 256 (270)
T 1hux_A 210 KDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYK 256 (270)
T ss_dssp SSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHH
T ss_pred CeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHH
Confidence 4689999998 4577888888999887766555 467788776543
No 100
>1uvq_C Orexin; immunology, MHC class II, diabetes, narcolepsy, autoimmune disease, structural proteomics in europe, spine, structural genomics; HET: NAG FUC BMA; 1.8A {Homo sapiens}
Probab=30.14 E-value=31 Score=19.54 Aligned_cols=19 Identities=32% Similarity=0.503 Sum_probs=15.9
Q ss_pred CCCCCCCCeEEEecCCcee
Q 030315 15 DESESQISHLALDIGGSLI 33 (179)
Q Consensus 15 ~~~~~~~~~~aiDIGGTL~ 33 (179)
|-++.+++|-++-=||||+
T Consensus 7 N~pSTKVsWAaVtgggslv 25 (33)
T 1uvq_C 7 NLPSTKVSWAAVGGGGSLV 25 (33)
T ss_pred CCCccccceEEecCCceee
Confidence 3347889999999999986
No 101
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=29.65 E-value=1e+02 Score=27.48 Aligned_cols=44 Identities=20% Similarity=0.246 Sum_probs=35.1
Q ss_pred ceEEEEecCchH--hhHHHHHHHhC-CCcce-eehhhHHHHhHHHHHH
Q 030315 100 KTLIKATGGGAY--KFADLIKEKLG-VVLDK-EDEMDCLVTGANFLLK 143 (179)
Q Consensus 100 ~~~i~aTGGGA~--Kf~dl~~~~lg-v~~~k-~DEMecLI~Gl~fLL~ 143 (179)
...|.++||++. ...+.+++.++ .++.+ .+=.+|+..|+-..-.
T Consensus 331 i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~ 378 (554)
T 1yuw_A 331 IHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 378 (554)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHH
T ss_pred CcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHH
Confidence 467999999998 58899999996 66544 5777899999987654
No 102
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=29.50 E-value=17 Score=27.12 Aligned_cols=24 Identities=17% Similarity=0.289 Sum_probs=14.4
Q ss_pred CCCCCCCCCCCCeEEEecCCceeE
Q 030315 11 NLNGDESESQISHLALDIGGSLIK 34 (179)
Q Consensus 11 ~~~~~~~~~~~~~~aiDIGGTL~K 34 (179)
++.++.....+..+.+|+.|||+.
T Consensus 9 ~~~~~~~~~~ik~i~fDlDGTL~d 32 (237)
T 4ex6_A 9 HRSSGAPAAADRGVILDLDGTLAD 32 (237)
T ss_dssp --------CCCEEEEECSBTTTBC
T ss_pred hhccCCCcccCCEEEEcCCCCCcC
Confidence 333334367889999999999974
No 103
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=29.07 E-value=1.1e+02 Score=22.76 Aligned_cols=98 Identities=11% Similarity=0.082 Sum_probs=58.2
Q ss_pred CCCCCeEEEecCCceeE-EEEEeecCCCCCCCCCCCCCCCCCCCCeEEEEEeeccCHHHHHHHHHhhhhhcccccccCCC
Q 030315 18 ESQISHLALDIGGSLIK-VVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSKIIDCLEFIRSKNLHLAGFRHHDAS 96 (179)
Q Consensus 18 ~~~~~~~aiDIGGTL~K-lVYf~~~~~~~~~~~~~g~~~~~~~~G~LhF~kFeT~~i~~~i~fik~~~l~~~~~~~~~~~ 96 (179)
...+..+.+|+=|||+- -+|++ ..|+ ....|...+. ..|+++++.+
T Consensus 6 ~~~ikliv~D~DGtL~d~~~~~~-------------------~~g~-~~~~f~~~D~-~~L~~Lk~~G------------ 52 (168)
T 3ewi_A 6 LKEIKLLVCNIDGCLTNGHIYVS-------------------GDQK-EIISYDVKDA-IGISLLKKSG------------ 52 (168)
T ss_dssp -CCCCEEEEECCCCCSCSCCBCC-------------------SSCC-CEEEEEHHHH-HHHHHHHHTT------------
T ss_pred HhcCcEEEEeCccceECCcEEEc-------------------CCCC-EEEEEecCcH-HHHHHHHHCC------------
Confidence 34678999999999875 22333 2232 2355665553 4688888765
Q ss_pred CCCceEEEEecCchHhhHHHHHH--HhCCCcceeehhhHHHHhHHHHHHh--c-CCccEEEecCC
Q 030315 97 ASDKTLIKATGGGAYKFADLIKE--KLGVVLDKEDEMDCLVTGANFLLKF--I-KKLLLMWMVRR 156 (179)
Q Consensus 97 ~~~~~~i~aTGGGA~Kf~dl~~~--~lgv~~~k~DEMecLI~Gl~fLL~~--i-~~E~Fty~~~~ 156 (179)
.....+||. ...+.+.+ .+|+. ...--+-=..++..+++. + +.++..+-+..
T Consensus 53 ---i~~~I~Tg~---~~~~~~l~~l~lgi~--~~~g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~ 109 (168)
T 3ewi_A 53 ---IEVRLISER---ACSKQTLSALKLDCK--TEVSVSDKLATVDEWRKEMGLCWKEVAYLGNEV 109 (168)
T ss_dssp ---CEEEEECSS---CCCHHHHHTTCCCCC--EECSCSCHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred ---CEEEEEeCc---HHHHHHHHHhCCCcE--EEECCCChHHHHHHHHHHcCcChHHEEEEeCCH
Confidence 345789988 45666666 56654 222222234566666665 2 56777775543
No 104
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=28.35 E-value=42 Score=29.91 Aligned_cols=19 Identities=26% Similarity=0.191 Sum_probs=16.9
Q ss_pred CCeEEEecCCceeEEEEEe
Q 030315 21 ISHLALDIGGSLIKVVYFL 39 (179)
Q Consensus 21 ~~~~aiDIGGTL~KlVYf~ 39 (179)
-..+|||+|.|-+|.+-|.
T Consensus 10 ~~~lgID~GTts~Ka~l~d 28 (538)
T 4bc3_A 10 RCCLGWDFSTQQVKVVAVD 28 (538)
T ss_dssp CEEEEEEECSSEEEEEEEE
T ss_pred CEEEEEEEcCcCEEEEEEC
Confidence 3679999999999988877
No 105
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=28.25 E-value=36 Score=27.86 Aligned_cols=16 Identities=19% Similarity=0.387 Sum_probs=14.4
Q ss_pred CeEEEecCCceeEEEE
Q 030315 22 SHLALDIGGSLIKVVY 37 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVY 37 (179)
+.+|||.|.|.+|+.+
T Consensus 4 ~~igIDlGT~~s~v~~ 19 (344)
T 1jce_A 4 KDIGIDLGTANTLVFL 19 (344)
T ss_dssp CEEEEEECSSEEEEEE
T ss_pred ceEEEEcCcCcEEEEE
Confidence 5799999999999976
No 106
>2nrh_A Transcriptional activator, putative, BAF family; structural genomics, unknown function, putative transcription activator, PSI-2; 2.30A {Campylobacter jejuni} SCOP: c.55.1.13 c.55.1.13
Probab=27.74 E-value=28 Score=27.86 Aligned_cols=43 Identities=21% Similarity=0.200 Sum_probs=29.8
Q ss_pred eEEEEecCchHhhHHHHHHHhCCCcceeehhhHHHHhHHHHHHhcCCccE
Q 030315 101 TLIKATGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKFIKKLLL 150 (179)
Q Consensus 101 ~~i~aTGGGA~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL~~i~~E~F 150 (179)
.++.+|||.|..+++.++ ....|+ +=+.+|+..+.+....+.+
T Consensus 169 ~~vi~TGG~a~~l~~~~~------~~~~d~-~LvL~GL~~i~~~n~~~~~ 211 (219)
T 2nrh_A 169 KKLYFTGGDGQFLANYFD------HAIYDK-LLIFRGMKKIIKENPNLLY 211 (219)
T ss_dssp SCEEEESTTHHHHHTTCS------SEEECT-THHHHHHHHHHHHCGGGC-
T ss_pred CeEEEECCCHHHHHhhCC------CCEECc-ChHHHHHHHHHHhcchhcc
Confidence 578999999987775542 245555 4677899999876544444
No 107
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=27.65 E-value=60 Score=28.50 Aligned_cols=42 Identities=19% Similarity=0.304 Sum_probs=32.1
Q ss_pred eEEEEecCchH--hhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 101 TLIKATGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 101 ~~i~aTGGGA~--Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
..|.++||||. -+.+++.+.+|+++.+.+.-|+...|.-++-
T Consensus 405 ~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~lA 448 (504)
T 2d4w_A 405 TELRVDGGMVANELLMQFQADQLGVDVVRPKVAETTALGAAYAA 448 (504)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHH
T ss_pred ceEEEeCCcccCHHHHHHHHHHhCCeEEeCCCCcchHHHHHHHH
Confidence 57999999985 2455667778999988777777777877765
No 108
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=27.58 E-value=51 Score=28.90 Aligned_cols=42 Identities=14% Similarity=0.278 Sum_probs=32.3
Q ss_pred eEEEEecCchH--hhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 101 TLIKATGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 101 ~~i~aTGGGA~--Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
..|.++||||. -+.+++.+.+|+++.+.+.-|+...|.-++-
T Consensus 409 ~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~~~~e~~alGaA~la 452 (503)
T 2w40_A 409 HVLRCDGGMTKNKPFMQFNSDIINTKIEVSKYKEVTSLGAAVLA 452 (503)
T ss_dssp SCEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHH
T ss_pred ceEEEeCccccCHHHHHHHHHHHCCeEEecCCCcchHHHHHHHH
Confidence 56999999994 3556667788999988777677777877765
No 109
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=27.55 E-value=1.2e+02 Score=22.92 Aligned_cols=54 Identities=13% Similarity=0.162 Sum_probs=36.1
Q ss_pred CCeEEEEEeeccCHHHHHHHHHhhhhhcccccccCCCCCCceEEEEecCchHhhHHHHHHHhCCCcceee
Q 030315 60 EGRLHFAKFETSKIIDCLEFIRSKNLHLAGFRHHDASASDKTLIKATGGGAYKFADLIKEKLGVVLDKED 129 (179)
Q Consensus 60 ~G~LhF~kFeT~~i~~~i~fik~~~l~~~~~~~~~~~~~~~~~i~aTGGGA~Kf~dl~~~~lgv~~~k~D 129 (179)
.|++-+.- .-++=++.++|.+...-... .-.|+||||=|- .|++.-|+++.++.
T Consensus 11 ~g~V~lsv-~D~dK~~~v~~ak~~~~ll~-----------Gf~l~AT~gTa~----~L~e~~Gl~v~~v~ 64 (152)
T 1b93_A 11 RKHIALVA-HDHCKQMLMSWVERHQPLLE-----------QHVLYATGTTGN----LISRATGMNVNAML 64 (152)
T ss_dssp SCEEEEEE-CGGGHHHHHHHHHHTHHHHT-----------TSEEEEETTHHH----HHHHHHCCCCEEEC
T ss_pred CCEEEEEE-ehhhHHHHHHHHHHHHHHhC-----------CCEEEEccHHHH----HHHHHhCceeEEEE
Confidence 46665444 44444999999988753322 257999999875 45555788877653
No 110
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=26.21 E-value=1.9e+02 Score=25.63 Aligned_cols=86 Identities=19% Similarity=0.193 Sum_probs=45.2
Q ss_pred CeEEEecCCceeEEEEEeecCCCCCCCCCCCCCCCCCCCCeEEEEEeeccCHHHHHHHHHhhhhhcccccccCCCCCCce
Q 030315 22 SHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSKIIDCLEFIRSKNLHLAGFRHHDASASDKT 101 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~~~~~~~~~~~~~g~~~~~~~~G~LhF~kFeT~~i~~~i~fik~~~l~~~~~~~~~~~~~~~~ 101 (179)
..+-+||||-.+-++++.........+. +-|.+.+..-...+++.+.+|+++.-..... +- ......
T Consensus 141 ~~lvvDIGGGStEl~~~~~~~~~~~~Sl---------~lG~vrl~e~~~~~~~~~~~~i~~~l~~~~~-~~---~~~~~~ 207 (508)
T 3hi0_A 141 DGIAGDLGGGSLELIDIKDKSCGEGITL---------PLGGLRLSEQSDGSLEKAATIARKHVKSFAK-LL---AAGEGR 207 (508)
T ss_dssp EEEEEEECSSCEEEEEEETTEECCCEEE---------SCCHHHHHHHTTTCHHHHHHHHHHHHHTTHH-HH---HTTTTS
T ss_pred CeEEEEeCCCceEEEEeeCCeeeeEEEe---------cceEEehhhcChhHHHHHHHHHHHHHHHHHH-HH---hhcCCC
Confidence 3589999999999999873211111011 1111111111124677888888664211000 00 001235
Q ss_pred EEEEecCchHhhHHHHHHH
Q 030315 102 LIKATGGGAYKFADLIKEK 120 (179)
Q Consensus 102 ~i~aTGGGA~Kf~dl~~~~ 120 (179)
.++++||.+--.+.+....
T Consensus 208 ~~ig~gGt~~~la~i~~~~ 226 (508)
T 3hi0_A 208 TFYAVGGTWRNIAKLHMEI 226 (508)
T ss_dssp EEEEESHHHHHHHHHHHHH
T ss_pred EEEEEehHHHHHHHHHhhc
Confidence 7899999887777666543
No 111
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=26.08 E-value=1e+02 Score=26.08 Aligned_cols=40 Identities=25% Similarity=0.358 Sum_probs=27.2
Q ss_pred CHHHHHHHHHhhhhhcccccccCCCCCCceEEEEecCch---HhhHHHHHHHhCCCcc
Q 030315 72 KIIDCLEFIRSKNLHLAGFRHHDASASDKTLIKATGGGA---YKFADLIKEKLGVVLD 126 (179)
Q Consensus 72 ~i~~~i~fik~~~l~~~~~~~~~~~~~~~~~i~aTGGGA---~Kf~dl~~~~lgv~~~ 126 (179)
...++++++++.+ ...+.+|.++. ..+.+.+.+.||+++.
T Consensus 33 ~a~~~l~~l~~~g---------------~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~ 75 (352)
T 3kc2_A 33 GASDALKLLNRNK---------------IPYILLTNGGGFSERARTEFISSKLDVDVS 75 (352)
T ss_dssp THHHHHHHHHHTT---------------CCEEEECSCCSSCHHHHHHHHHHHHTSCCC
T ss_pred CHHHHHHHHHHCC---------------CEEEEEeCCCCCCchHHHHHHHHhcCCCCC
Confidence 4566777776653 34678888763 6677788777888653
No 112
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=25.46 E-value=65 Score=28.37 Aligned_cols=43 Identities=21% Similarity=0.404 Sum_probs=32.1
Q ss_pred ceEEEEecCchH--hhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 100 KTLIKATGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 100 ~~~i~aTGGGA~--Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
...|.++||||. -+..++.+.+|+++.+.+.-|+...|.-++-
T Consensus 404 ~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA 448 (506)
T 3h3n_X 404 IPLLKVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLA 448 (506)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHHTSEEEECSSSCHHHHHHHHHH
T ss_pred CCEEEEecccccCHHHHHHHHHHhCCeEEecCCCcchhHHHHHHH
Confidence 357999999984 2455667778999987766667777877765
No 113
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=24.95 E-value=29 Score=26.04 Aligned_cols=15 Identities=20% Similarity=0.499 Sum_probs=12.7
Q ss_pred CCCeEEEecCCceeE
Q 030315 20 QISHLALDIGGSLIK 34 (179)
Q Consensus 20 ~~~~~aiDIGGTL~K 34 (179)
.+..|.+|+.|||+.
T Consensus 21 ~ik~i~fDlDGTL~d 35 (254)
T 3umc_A 21 GMRAILFDVFGTLVD 35 (254)
T ss_dssp SCCEEEECCBTTTEE
T ss_pred CCcEEEEeCCCccEe
Confidence 357899999999984
No 114
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=24.39 E-value=71 Score=28.03 Aligned_cols=44 Identities=14% Similarity=0.272 Sum_probs=32.7
Q ss_pred ceEEEEecCchH--hhHHHHHHHhCCCcceeehhhHHHHhHHHHHH
Q 030315 100 KTLIKATGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLLK 143 (179)
Q Consensus 100 ~~~i~aTGGGA~--Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL~ 143 (179)
...|.++||||. -+.+++.+.+|+++.+...-|+...|.-++-.
T Consensus 405 ~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~la~ 450 (501)
T 3g25_A 405 VQSLRVDGGAVKNNFIMQFQADIVNTSVERPEIQETTALGAAFLAG 450 (501)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHHH
T ss_pred CcEEEEecchhcCHHHHHHHHHHhCCceEecCCCcchHHHHHHHHH
Confidence 467999999984 24455667789999877777777788877653
No 115
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=24.28 E-value=1.8e+02 Score=20.24 Aligned_cols=98 Identities=14% Similarity=0.031 Sum_probs=51.5
Q ss_pred CCeEEEecCCceeE-EEEEeecCCCCCCCCCCCCCCCCCCCCeEEEEEeeccCHHHHHHHHHhhhhhcccccccCCCCCC
Q 030315 21 ISHLALDIGGSLIK-VVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSKIIDCLEFIRSKNLHLAGFRHHDASASD 99 (179)
Q Consensus 21 ~~~~aiDIGGTL~K-lVYf~~~~~~~~~~~~~g~~~~~~~~G~LhF~kFeT~~i~~~i~fik~~~l~~~~~~~~~~~~~~ 99 (179)
+..+.+|+-|||+. -.++. ..++ ....|.. ...++++.+++.+
T Consensus 9 ~k~v~~DlDGTL~~~~~~~~-------------------~~~~-~~~~~~~-~~~~~l~~l~~~g--------------- 52 (162)
T 2p9j_A 9 LKLLIMDIDGVLTDGKLYYT-------------------EHGE-TIKVFNV-LDGIGIKLLQKMG--------------- 52 (162)
T ss_dssp CCEEEECCTTTTSCSEEEEE-------------------TTEE-EEEEEEH-HHHHHHHHHHTTT---------------
T ss_pred eeEEEEecCcceECCceeec-------------------CCCc-eeeeecc-cHHHHHHHHHHCC---------------
Confidence 56799999999985 22323 1122 2233432 2346777776653
Q ss_pred ceEEEEecCchHhhHHHHHHHhCCCcceeehhhHHHHhHHHHHHh---cCCccEEEecCC
Q 030315 100 KTLIKATGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKF---IKKLLLMWMVRR 156 (179)
Q Consensus 100 ~~~i~aTGGGA~Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL~~---i~~E~Fty~~~~ 156 (179)
...+.+||+... ..+.+.+.+|+.. .++.-..--..+..+++. -+.++..+-+..
T Consensus 53 ~~~~i~T~~~~~-~~~~~l~~~gl~~-~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~ 110 (162)
T 2p9j_A 53 ITLAVISGRDSA-PLITRLKELGVEE-IYTGSYKKLEIYEKIKEKYSLKDEEIGFIGDDV 110 (162)
T ss_dssp CEEEEEESCCCH-HHHHHHHHTTCCE-EEECC--CHHHHHHHHHHTTCCGGGEEEEECSG
T ss_pred CEEEEEeCCCcH-HHHHHHHHcCCHh-hccCCCCCHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 356788887644 4445556777642 122212222333444443 356777776543
No 116
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=24.24 E-value=1.8e+02 Score=20.06 Aligned_cols=22 Identities=18% Similarity=0.350 Sum_probs=18.4
Q ss_pred chHhhHHHHHHHhCCCcceeehh
Q 030315 109 GAYKFADLIKEKLGVVLDKEDEM 131 (179)
Q Consensus 109 GA~Kf~dl~~~~lgv~~~k~DEM 131 (179)
-+.+|++.+++. ++++...||-
T Consensus 73 ~~~~f~~~L~~~-~lpV~~~DER 94 (98)
T 1iv0_A 73 KVLPLVEALRAR-GVEVELWDER 94 (98)
T ss_dssp TTHHHHHHHHHT-TCEEEEECCS
T ss_pred HHHHHHHHHhcC-CCCEEEECCC
Confidence 456899999888 8999999984
No 117
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=23.61 E-value=2.9e+02 Score=22.65 Aligned_cols=19 Identities=32% Similarity=0.419 Sum_probs=17.0
Q ss_pred CCeEEEecCCceeEEEEEe
Q 030315 21 ISHLALDIGGSLIKVVYFL 39 (179)
Q Consensus 21 ~~~~aiDIGGTL~KlVYf~ 39 (179)
-+.+-+||||-.+-++++.
T Consensus 131 ~~~lviDIGGGStEl~~~~ 149 (315)
T 3mdq_A 131 HISLAMDIGGGSVEFIIGN 149 (315)
T ss_dssp CCEEEEEECSSCEEEEEEC
T ss_pred CCEEEEEeCCCceEEEEEE
Confidence 4679999999999999987
No 118
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=23.60 E-value=74 Score=28.05 Aligned_cols=43 Identities=16% Similarity=0.346 Sum_probs=32.1
Q ss_pred ceEEEEecCchH--hhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 100 KTLIKATGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 100 ~~~i~aTGGGA~--Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
...|.++||||. -+..++.+.+|+++.+...-|+...|.-++-
T Consensus 402 ~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA 446 (510)
T 2p3r_A 402 LHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLA 446 (510)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHH
T ss_pred ccEEEEeCchhcCHHHHHHHHHHhCCceEecCCCCcHHHHHHHHH
Confidence 467999999984 2445566778999987776667777887765
No 119
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=23.47 E-value=1.4e+02 Score=26.94 Aligned_cols=43 Identities=16% Similarity=0.113 Sum_probs=34.1
Q ss_pred ceEEEEecCchH--hhHHHHHHHhCCCcce-eehhhHHHHhHHHHH
Q 030315 100 KTLIKATGGGAY--KFADLIKEKLGVVLDK-EDEMDCLVTGANFLL 142 (179)
Q Consensus 100 ~~~i~aTGGGA~--Kf~dl~~~~lgv~~~k-~DEMecLI~Gl~fLL 142 (179)
...|.++||++. ...+.+++.+|.++.+ .+=.+|++.|+-..-
T Consensus 334 i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a 379 (605)
T 4b9q_A 334 IDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQG 379 (605)
T ss_dssp CSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHH
T ss_pred CcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHH
Confidence 467999999995 6788899999987765 556678999987654
No 120
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=23.43 E-value=43 Score=27.75 Aligned_cols=18 Identities=17% Similarity=0.211 Sum_probs=15.9
Q ss_pred CeEEEecCCceeEEEEEe
Q 030315 22 SHLALDIGGSLIKVVYFL 39 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~ 39 (179)
..+|||+|.|-++++|..
T Consensus 3 ~~vGIDlGTt~s~va~~~ 20 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMD 20 (383)
T ss_dssp CCCEEECCSSEEEEEEEE
T ss_pred cEEEEEcCCCCEEEEEEE
Confidence 368999999999999975
No 121
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=22.68 E-value=1.2e+02 Score=27.90 Aligned_cols=45 Identities=20% Similarity=0.397 Sum_probs=36.1
Q ss_pred ceEEEEecCchH--hhHHHHHHHhCCCcc-eeehhhHHHHhHHHHHHh
Q 030315 100 KTLIKATGGGAY--KFADLIKEKLGVVLD-KEDEMDCLVTGANFLLKF 144 (179)
Q Consensus 100 ~~~i~aTGGGA~--Kf~dl~~~~lgv~~~-k~DEMecLI~Gl~fLL~~ 144 (179)
...|.++||++. ...+.+++.+|.++. -.+=.+|++.|+-+.-..
T Consensus 335 I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ 382 (675)
T 3d2f_A 335 VDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAI 382 (675)
T ss_dssp CCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHH
T ss_pred CcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHH
Confidence 467999999995 488999999997764 367788999999876543
No 122
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=22.50 E-value=1.3e+02 Score=21.23 Aligned_cols=70 Identities=19% Similarity=0.136 Sum_probs=42.5
Q ss_pred CCCeEEEEE-eeccCHHHHHHHHHhhhhhcccccccCCCCCCceEEEEecCch--HhhHHHHHHHhCCCcceeehhhHHH
Q 030315 59 LEGRLHFAK-FETSKIIDCLEFIRSKNLHLAGFRHHDASASDKTLIKATGGGA--YKFADLIKEKLGVVLDKEDEMDCLV 135 (179)
Q Consensus 59 ~~G~LhF~k-FeT~~i~~~i~fik~~~l~~~~~~~~~~~~~~~~~i~aTGGGA--~Kf~dl~~~~lgv~~~k~DEMecLI 135 (179)
.+-++.|.= |+.-.=+++.+.|++.+..... .-...+.+.++|-.| -|+... +.+|+++.-++||..++
T Consensus 34 ~G~~~v~TG~l~~~~R~e~~~~i~~~Gg~v~~------sVSkkTd~LV~G~~~g~sK~~kA--~~lgI~Ii~E~~f~~ll 105 (109)
T 2k6g_A 34 EGLIFVITGVLESIERDEAKSLIERYGGKVTG------NVSKKTNYLVMGRDSGQSKSDKA--AALGTKIIDEDGLLNLI 105 (109)
T ss_dssp TTCEEEEESBCSSCCHHHHHHHHHHTTCEEES------SCCTTCCEEEECBCCCHHHHHHH--HHHTCEEECHHHHHHHH
T ss_pred CCCEEEEeeeCCCCCHHHHHHHHHHcCCEeeC------cccCCceEEEECCCCChHHHHHH--HHcCCeEEeHHHHHHHH
Confidence 444455543 3232338899999888754331 112345566666633 577664 45899998888887766
Q ss_pred H
Q 030315 136 T 136 (179)
Q Consensus 136 ~ 136 (179)
.
T Consensus 106 ~ 106 (109)
T 2k6g_A 106 R 106 (109)
T ss_dssp H
T ss_pred H
Confidence 3
No 123
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=22.40 E-value=2.5e+02 Score=21.62 Aligned_cols=15 Identities=20% Similarity=0.188 Sum_probs=11.7
Q ss_pred CCCeEEEecCCceeE
Q 030315 20 QISHLALDIGGSLIK 34 (179)
Q Consensus 20 ~~~~~aiDIGGTL~K 34 (179)
.+..|.+|+-|||..
T Consensus 13 ~~k~i~~D~DGtL~~ 27 (284)
T 2hx1_A 13 KYKCIFFDAFGVLKT 27 (284)
T ss_dssp GCSEEEECSBTTTEE
T ss_pred cCCEEEEcCcCCcCc
Confidence 466788999999864
No 124
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=21.79 E-value=80 Score=28.06 Aligned_cols=42 Identities=19% Similarity=0.287 Sum_probs=29.1
Q ss_pred eEEEEecCchH--hhHHHHHHHhCCCcceeehhhHHHHhHHHHH
Q 030315 101 TLIKATGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (179)
Q Consensus 101 ~~i~aTGGGA~--Kf~dl~~~~lgv~~~k~DEMecLI~Gl~fLL 142 (179)
..|.++||||- -+..++.+.+|+++.+...-|+...|.-++-
T Consensus 436 ~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA 479 (538)
T 4bc3_A 436 TKILATGGASHNREILQVLADVFDAPVYVIDTANSACVGSAYRA 479 (538)
T ss_dssp CCEEEEEGGGGCHHHHHHHHHHHTSCEEECCCTTHHHHHHHHHH
T ss_pred CeEEEEcchhcCHHHHHHHHHHhCCceEecCCCCchHHHHHHHH
Confidence 57999999984 2344556678999888666666666665543
No 125
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=21.72 E-value=1.3e+02 Score=22.49 Aligned_cols=25 Identities=16% Similarity=0.284 Sum_probs=18.1
Q ss_pred cCHHHHHHHHHhhhhhcccccccCCCCCCceEEEEecCch
Q 030315 71 SKIIDCLEFIRSKNLHLAGFRHHDASASDKTLIKATGGGA 110 (179)
Q Consensus 71 ~~i~~~i~fik~~~l~~~~~~~~~~~~~~~~~i~aTGGGA 110 (179)
..+.++++.+++++ .....+|++..
T Consensus 53 pg~~e~L~~L~~~G---------------~~~~ivTn~~~ 77 (211)
T 2gmw_A 53 DGVIDAMRELKKMG---------------FALVVVTNQSG 77 (211)
T ss_dssp TTHHHHHHHHHHTT---------------CEEEEEEECTH
T ss_pred cCHHHHHHHHHHCC---------------CeEEEEECcCC
Confidence 36778888887764 35678898885
No 126
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=21.59 E-value=1.2e+02 Score=27.36 Aligned_cols=43 Identities=16% Similarity=0.113 Sum_probs=34.7
Q ss_pred ceEEEEecCchH--hhHHHHHHHhCCCcce-eehhhHHHHhHHHHH
Q 030315 100 KTLIKATGGGAY--KFADLIKEKLGVVLDK-EDEMDCLVTGANFLL 142 (179)
Q Consensus 100 ~~~i~aTGGGA~--Kf~dl~~~~lgv~~~k-~DEMecLI~Gl~fLL 142 (179)
...|.++||++. ...+.+++.+|.++.+ .+=.+|+..|+-..-
T Consensus 334 i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a 379 (605)
T 2kho_A 334 IDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQG 379 (605)
T ss_dssp CSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHH
T ss_pred CceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHH
Confidence 467999999996 5889999999976543 666789999998764
No 127
>2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.25 E-value=1.7e+02 Score=20.86 Aligned_cols=55 Identities=22% Similarity=0.195 Sum_probs=36.5
Q ss_pred HHHHHHHHHhhhhhcccccccCCCCCCceEEEEecCch--HhhHHHHHHHhCCCcceeehhhHHH
Q 030315 73 IIDCLEFIRSKNLHLAGFRHHDASASDKTLIKATGGGA--YKFADLIKEKLGVVLDKEDEMDCLV 135 (179)
Q Consensus 73 i~~~i~fik~~~l~~~~~~~~~~~~~~~~~i~aTGGGA--~Kf~dl~~~~lgv~~~k~DEMecLI 135 (179)
=+++.++|++.+..... .-...+.+.++|-.| -|+... +.||+++.-++||..++
T Consensus 39 R~e~~~~i~~~Ggkv~~------sVSkkTd~LV~G~~~g~sKl~KA--~~lgI~IisE~~f~~ll 95 (112)
T 2ebu_A 39 RDEAKSLIERYGGKVTG------NVSKKTNYLVMGRDSGQSKSDKA--AALGTKIIDEDGLLNLI 95 (112)
T ss_dssp HHHHHHHHHHTTCEECS------SCCSSCCEEEECSSCCSHHHHHH--HHHTCEEEEHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEec------cccCCeeEEEecCCCChHHHHHH--HHcCCeEEeHHHHHHHH
Confidence 38899999888754321 122345566667643 577654 45899988888888766
No 128
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=21.23 E-value=63 Score=28.43 Aligned_cols=19 Identities=16% Similarity=0.204 Sum_probs=16.7
Q ss_pred CeEEEecCCceeEEEEEee
Q 030315 22 SHLALDIGGSLIKVVYFLR 40 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~~ 40 (179)
+.+|||.|.|-++++|..+
T Consensus 3 ~~iGIDlGTt~s~va~~~~ 21 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEG 21 (509)
T ss_dssp CEEEEEECSSEEEEEEEET
T ss_pred CEEEEEcCCceEEEEEEEC
Confidence 4799999999999999763
No 129
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=20.70 E-value=48 Score=28.69 Aligned_cols=20 Identities=25% Similarity=0.298 Sum_probs=16.5
Q ss_pred CeEEEecCCceeEEEEEeec
Q 030315 22 SHLALDIGGSLIKVVYFLRS 41 (179)
Q Consensus 22 ~~~aiDIGGTL~KlVYf~~~ 41 (179)
..+|||||.|-+|+|=.+..
T Consensus 9 ~ivglDIGts~I~~vv~~~~ 28 (419)
T 4a2a_A 9 FYTSIDIGSRYIKGLVLGKR 28 (419)
T ss_dssp EEEEEEECSSEEEEEEEEC-
T ss_pred EEEEEEccCCEEEEEEEEEc
Confidence 56899999999999987643
No 130
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=20.59 E-value=60 Score=28.33 Aligned_cols=32 Identities=19% Similarity=0.312 Sum_probs=21.6
Q ss_pred ceEEEEecCchHh--hHHHHHHHhC-CCcceeehh
Q 030315 100 KTLIKATGGGAYK--FADLIKEKLG-VVLDKEDEM 131 (179)
Q Consensus 100 ~~~i~aTGGGA~K--f~dl~~~~lg-v~~~k~DEM 131 (179)
...|.++||||+- .-+.|++.|. +++...||.
T Consensus 284 ~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~ 318 (371)
T 3qbx_A 284 CEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEY 318 (371)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGG
T ss_pred CceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHc
Confidence 3579999999984 3345666664 666665553
No 131
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=20.48 E-value=95 Score=27.35 Aligned_cols=43 Identities=33% Similarity=0.421 Sum_probs=32.1
Q ss_pred eEEEEecCchH--hhHHHHHHHhCCCc-ceeehhhHHHHhHHHHHH
Q 030315 101 TLIKATGGGAY--KFADLIKEKLGVVL-DKEDEMDCLVTGANFLLK 143 (179)
Q Consensus 101 ~~i~aTGGGA~--Kf~dl~~~~lgv~~-~k~DEMecLI~Gl~fLL~ 143 (179)
..|.++||||- -+..++.+.+|+++ .+.+.-|+...|.-++-.
T Consensus 404 ~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~~e~~alGaA~lA~ 449 (511)
T 3hz6_A 404 GLLKVVGGGARSEAWLRMIADNLNVSLLVKPDAHLHPLRGLAALAA 449 (511)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHHTCEEEECCCGGGHHHHHHHHHHH
T ss_pred CEEEEeCchhcCHHHHHHHHHHHCCeeEEecCCCCchHHHHHHHHH
Confidence 57999999984 24455567789999 777777777788877653
No 132
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=20.40 E-value=36 Score=25.57 Aligned_cols=15 Identities=20% Similarity=0.554 Sum_probs=12.5
Q ss_pred CCCeEEEecCCceeE
Q 030315 20 QISHLALDIGGSLIK 34 (179)
Q Consensus 20 ~~~~~aiDIGGTL~K 34 (179)
.+..|.+|+.|||+-
T Consensus 23 ~~k~i~fDlDGTL~d 37 (243)
T 3qxg_A 23 KLKAVLFDMDGVLFN 37 (243)
T ss_dssp CCCEEEECSBTTTBC
T ss_pred cCCEEEEcCCCCCCC
Confidence 457899999999973
No 133
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=20.13 E-value=63 Score=26.98 Aligned_cols=20 Identities=25% Similarity=0.403 Sum_probs=16.6
Q ss_pred CCCCeEEEecCCceeEEEEE
Q 030315 19 SQISHLALDIGGSLIKVVYF 38 (179)
Q Consensus 19 ~~~~~~aiDIGGTL~KlVYf 38 (179)
+..+.++||+|.+.+|+-|.
T Consensus 3 ~~~~~ivID~Gs~~~k~G~~ 22 (375)
T 2fxu_A 3 DETTALVCDNGSGLVKAGFA 22 (375)
T ss_dssp -CCCCEEEEECSSEEEEEET
T ss_pred CCCceEEEECCCCeEEEEEC
Confidence 34578999999999999884
Done!