Query 030319
Match_columns 179
No_of_seqs 148 out of 587
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 19:20:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030319.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030319hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mg1_A OCP, orange carotenoid 99.9 1.4E-24 4.9E-29 188.4 4.1 127 46-173 142-282 (323)
2 4h3u_A Hypothetical protein; s 99.6 3E-16 1E-20 120.6 8.4 83 83-168 24-107 (158)
3 3ff2_A Uncharacterized cystati 99.6 7.4E-15 2.5E-19 107.2 9.9 83 84-169 2-85 (117)
4 3fh1_A Uncharacterized NTF2-li 99.5 4.9E-14 1.7E-18 104.7 9.1 81 84-168 17-101 (129)
5 3f9s_A Putative polyketide cyc 99.5 1.1E-13 3.7E-18 104.2 9.3 83 84-169 6-93 (146)
6 3ebt_A Uncharacterized NTF2-li 99.5 5.1E-14 1.7E-18 103.4 7.2 81 84-167 3-90 (132)
7 3k0z_A Putative polyketide cyc 99.5 1.2E-13 4E-18 107.1 9.5 81 84-168 34-115 (159)
8 3kkg_A Putative snoal-like pol 99.5 8.5E-14 2.9E-18 105.0 7.8 84 83-170 8-95 (146)
9 2gex_A SNOL; alpha+beta barrel 99.5 3.3E-13 1.1E-17 102.6 10.1 79 85-168 5-84 (152)
10 2k54_A Protein ATU0742; protei 99.4 2.4E-13 8.3E-18 99.5 8.4 81 85-169 4-85 (123)
11 2f99_A Aklanonic acid methyl e 99.4 9.4E-14 3.2E-18 106.3 6.3 84 84-169 11-95 (153)
12 3h3h_A Uncharacterized snoal-l 99.4 8.4E-14 2.9E-18 102.5 5.5 79 85-165 9-94 (122)
13 1sjw_A Nogalonic acid methyl e 99.4 8.3E-14 2.8E-18 103.9 5.4 84 85-170 3-87 (144)
14 3ec9_A Uncharacterized NTF2-li 99.4 5.5E-13 1.9E-17 99.4 9.6 82 84-168 12-98 (140)
15 3g8z_A Protein of unknown func 99.4 9.4E-13 3.2E-17 100.5 10.9 89 83-171 19-112 (148)
16 3g16_A Uncharacterized protein 99.4 8.9E-13 3E-17 104.6 10.4 84 84-169 10-96 (156)
17 3ehc_A Snoal-like polyketide c 99.4 2.6E-13 8.7E-18 100.2 6.5 81 84-172 3-84 (128)
18 2a15_A Hypothetical protein RV 99.4 1.4E-12 4.7E-17 96.9 10.4 82 83-168 6-97 (139)
19 3dm8_A Uncharacterized protein 99.4 5.8E-13 2E-17 101.0 8.3 83 84-167 4-93 (143)
20 3f14_A Uncharacterized NTF2-li 99.4 4.1E-13 1.4E-17 98.1 7.0 78 87-168 3-81 (112)
21 3fgy_A Uncharacterized NTF2-li 99.4 1.9E-13 6.4E-18 101.0 5.1 82 84-168 5-90 (135)
22 1oh0_A Steroid delta-isomerase 99.4 5.2E-13 1.8E-17 97.4 7.1 82 84-168 7-90 (131)
23 2gey_A ACLR protein; alpha+bet 99.4 2.3E-12 7.8E-17 98.8 9.4 78 85-168 5-83 (158)
24 1ohp_A Steroid delta-isomerase 99.4 2.2E-12 7.6E-17 92.0 8.1 79 85-168 6-86 (125)
25 1nww_A Limonene-1,2-epoxide hy 99.3 8E-12 2.7E-16 93.8 10.9 79 84-167 22-102 (149)
26 3grd_A Uncharacterized NTF2-su 99.3 4.5E-13 1.5E-17 99.0 3.7 82 84-168 4-92 (134)
27 3g0k_A Putative membrane prote 99.3 2.4E-12 8.3E-17 99.3 7.4 78 84-167 27-106 (148)
28 3mso_A Steroid delta-isomerase 99.3 3.5E-12 1.2E-16 98.0 8.3 84 84-170 9-93 (143)
29 3hk4_A MLR7391 protein; NTF2-l 99.3 8.3E-12 2.8E-16 95.8 10.2 85 83-170 19-107 (136)
30 3dxo_A Uncharacterized snoal-l 99.3 8.1E-12 2.8E-16 92.8 9.5 81 85-169 4-89 (121)
31 3i0y_A Putative polyketide cyc 99.3 4.3E-12 1.5E-16 93.9 7.6 82 84-168 8-90 (140)
32 1s5a_A Hypothetical protein YE 99.3 5.4E-12 1.8E-16 94.2 7.2 82 84-168 10-98 (150)
33 3dmc_A NTF2-like protein; stru 99.3 5.2E-12 1.8E-16 95.7 7.2 87 84-170 12-102 (134)
34 3f8h_A Putative polyketide cyc 99.3 3.9E-12 1.3E-16 97.7 5.5 83 84-168 18-100 (150)
35 2bng_A MB2760; epoxide hydrola 99.3 1.2E-11 4.2E-16 93.5 7.7 77 84-165 15-92 (149)
36 3d9r_A Ketosteroid isomerase-l 99.2 3.4E-11 1.2E-15 87.9 9.2 79 84-165 11-91 (135)
37 1tuh_A BAL32A, hypothetical pr 99.2 5E-11 1.7E-15 90.7 10.4 79 85-165 30-113 (156)
38 3f7x_A Putative polyketide cyc 99.2 2.9E-11 9.7E-16 92.8 8.5 83 84-169 20-103 (151)
39 3flj_A Uncharacterized protein 99.2 3.7E-11 1.3E-15 95.2 8.9 83 84-170 18-100 (155)
40 3rga_A Epoxide hydrolase; NTF2 99.2 6.1E-11 2.1E-15 100.7 10.7 83 84-169 138-221 (283)
41 3en8_A Uncharacterized NTF-2 l 99.2 4.1E-11 1.4E-15 90.1 7.9 80 85-170 6-87 (128)
42 3er7_A Uncharacterized NTF2-li 99.2 1.5E-11 5E-16 94.4 5.1 81 84-168 2-89 (131)
43 1z1s_A Hypothetical protein PA 99.2 1.7E-11 5.9E-16 94.7 5.5 83 84-168 23-110 (163)
44 3f8x_A Putative delta-5-3-keto 99.2 6.4E-11 2.2E-15 92.3 7.7 81 85-170 21-102 (148)
45 3hx8_A MLR2180 protein, putati 99.1 2E-10 6.8E-15 83.0 9.2 83 85-168 7-90 (129)
46 3rga_A Epoxide hydrolase; NTF2 99.1 9.3E-11 3.2E-15 99.5 8.3 80 85-169 7-89 (283)
47 3f40_A Uncharacterized NTF2-li 99.1 3E-10 1E-14 84.0 9.3 78 83-170 5-83 (114)
48 3lyg_A NTF2-like protein of un 99.0 3.4E-09 1.2E-13 80.5 10.0 73 84-156 2-74 (120)
49 3f7s_A Uncharacterized NTF2-li 99.0 5.8E-09 2E-13 77.7 10.6 67 86-152 10-76 (142)
50 2gxf_A Hypothetical protein YY 99.0 6.1E-10 2.1E-14 83.6 5.3 82 86-168 5-89 (142)
51 3gwr_A Putative calcium/calmod 98.9 1.1E-08 3.6E-13 78.7 11.9 85 83-169 7-96 (144)
52 3h51_A Putative calcium/calmod 98.9 1.3E-08 4.4E-13 77.6 10.4 84 84-168 20-105 (156)
53 3jum_A Phenazine biosynthesis 98.8 3.7E-09 1.3E-13 85.9 6.5 82 84-167 41-127 (185)
54 3rob_A Uncharacterized conserv 98.8 1.7E-08 6E-13 77.2 9.2 83 85-169 18-101 (139)
55 3ff0_A Phenazine biosynthesis 98.8 7E-09 2.4E-13 82.9 5.2 82 84-167 19-105 (163)
56 2ux0_A Calcium-calmodulin depe 98.7 5.2E-08 1.8E-12 72.6 8.2 83 85-167 14-100 (143)
57 3cu3_A Domain of unknown funct 98.6 1.2E-07 4.1E-12 73.3 9.1 56 84-140 16-71 (172)
58 4i4k_A Uncharacterized protein 98.6 1.4E-07 4.7E-12 71.6 8.5 66 85-152 20-87 (143)
59 3gzr_A Uncharacterized protein 98.6 1.2E-07 4.3E-12 72.6 7.9 81 86-167 8-92 (146)
60 3bb9_A Putative orphan protein 98.4 8E-07 2.7E-11 67.0 8.7 65 84-151 30-95 (148)
61 1tp6_A Hypothetical protein PA 98.4 4.7E-07 1.6E-11 68.1 6.5 72 90-165 12-91 (128)
62 2chc_A Protein RV3472; hypothe 98.4 1.8E-06 6.2E-11 66.1 8.9 77 85-166 15-93 (170)
63 3b7c_A Uncharacterized protein 98.3 3.3E-06 1.1E-10 61.8 9.3 82 86-169 7-94 (122)
64 2rgq_A Domain of unknown funct 98.3 3.8E-06 1.3E-10 63.1 9.3 65 85-151 11-75 (144)
65 3cnx_A Uncharacterized protein 98.3 3.3E-06 1.1E-10 67.3 9.1 82 85-168 13-114 (170)
66 3b8l_A Uncharacterized protein 98.3 2.5E-06 8.4E-11 65.0 7.6 59 84-142 28-88 (163)
67 3ke7_A Putative ketosteroid is 98.2 4.6E-06 1.6E-10 64.0 8.6 79 85-167 15-96 (134)
68 2rcd_A Uncharacterized protein 98.2 5.4E-06 1.8E-10 61.1 8.5 80 86-169 16-98 (129)
69 2rfr_A Uncharacterized protein 98.2 3.5E-06 1.2E-10 63.0 6.8 52 85-138 20-72 (155)
70 3a76_A Gamma-hexachlorocyclohe 98.1 5.3E-06 1.8E-10 64.7 6.8 57 85-142 32-89 (176)
71 3ef8_A Putative scyalone dehyd 98.0 5.5E-06 1.9E-10 62.8 5.4 80 86-167 13-94 (150)
72 3ejv_A Uncharacterized protein 98.0 6.6E-06 2.2E-10 65.2 5.2 80 85-166 27-120 (179)
73 2owp_A Hypothetical protein BX 97.9 6.5E-05 2.2E-09 56.5 8.9 54 86-139 13-66 (129)
74 3gzb_A Putative snoal-like pol 97.6 0.00045 1.5E-08 53.9 9.5 73 83-156 19-92 (154)
75 2imj_A Hypothetical protein DU 97.6 0.00036 1.2E-08 55.3 9.0 85 84-173 17-102 (166)
76 2r4i_A Uncharacterized protein 97.3 0.00056 1.9E-08 48.4 6.6 48 86-135 8-55 (123)
77 4gb5_A Uncharacterized protein 97.3 0.00045 1.6E-08 52.1 5.9 80 85-166 12-97 (159)
78 2f86_B Hypothetical protein K1 97.2 0.00044 1.5E-08 52.9 5.7 74 86-162 14-91 (143)
79 3fsd_A NTF2-like protein of un 97.1 0.0019 6.5E-08 47.6 7.5 51 83-135 13-63 (134)
80 3blz_A NTF2-like protein of un 96.9 0.0024 8.2E-08 46.8 6.9 79 85-166 13-94 (128)
81 3ecf_A NTF2-like protein; stru 96.7 0.0032 1.1E-07 47.8 6.2 83 86-175 7-90 (130)
82 3soy_A NTF2-like superfamily p 96.7 0.0012 4.1E-08 50.0 3.7 48 86-135 12-61 (145)
83 3duk_A NTF2-like protein of un 95.9 0.031 1.1E-06 41.3 7.5 86 85-176 13-103 (125)
84 2gbw_B Biphenyl 2,3-dioxygenas 95.5 0.074 2.5E-06 41.2 8.6 56 85-140 15-88 (174)
85 3eby_A Beta subunit of A putat 94.9 0.04 1.4E-06 42.3 5.3 54 86-139 16-79 (163)
86 1uli_B Biphenyl dioxygenase sm 94.8 0.21 7.2E-06 39.3 9.6 56 85-140 25-98 (187)
87 2b1x_B Naphthalene dioxygenase 94.6 0.14 4.6E-06 39.3 7.8 55 85-139 14-83 (172)
88 3fka_A Uncharacterized NTF-2 l 94.4 0.16 5.5E-06 37.1 7.5 85 86-176 11-99 (120)
89 3ujm_A Rasputin; NTF2-like fol 94.3 0.15 5.2E-06 37.6 7.1 84 83-171 4-91 (120)
90 2qiy_A UBP3-associated protein 93.7 0.15 5.2E-06 39.2 6.4 85 84-170 13-116 (154)
91 1wql_B Ethylbenzene dioxygenas 93.3 0.68 2.3E-05 36.3 9.8 55 85-139 24-96 (186)
92 3ksp_A Calcium/calmodulin-depe 93.2 0.13 4.6E-06 38.7 5.1 46 85-132 10-55 (129)
93 3e99_A Benzoate 1,2-dioxygenas 92.5 0.87 3E-05 35.2 9.1 53 86-138 10-77 (164)
94 1zo2_A NTF2, nuclear transport 92.1 0.45 1.6E-05 35.5 6.9 81 84-171 13-98 (129)
95 1idp_A Scytalone dehydratase; 91.8 0.069 2.4E-06 42.3 2.1 53 84-136 17-72 (172)
96 1gy6_A Nuclear transport facto 90.9 0.51 1.7E-05 35.1 5.9 80 84-170 9-93 (127)
97 3nv0_B NTF2-related export pro 90.5 0.73 2.5E-05 35.7 6.8 80 84-171 35-125 (154)
98 1gy7_A Nuclear transport facto 90.0 0.76 2.6E-05 34.0 6.2 80 85-171 8-93 (125)
99 1jkg_A P15; NTF2-like domain, 89.3 0.98 3.3E-05 34.0 6.5 51 84-137 15-65 (140)
100 3gzx_B Biphenyl dioxygenase su 89.1 2.8 9.6E-05 33.0 9.3 54 85-138 24-95 (186)
101 2bmo_B Oxygenase-beta NBDO; ni 88.8 2.1 7.1E-05 34.0 8.4 34 86-119 34-68 (194)
102 3q90_A RAS GTPase-activating p 88.5 0.84 2.9E-05 34.5 5.6 84 84-171 11-104 (140)
103 1vqq_A Saupbp2A, penicillin-bi 84.3 1.4 4.7E-05 41.1 5.7 76 85-168 3-81 (646)
104 1jkg_B TAP; NTF2-like domain, 76.4 2 6.9E-05 35.5 3.6 54 84-137 16-100 (250)
105 3k7c_A Putative NTF2-like tran 56.9 56 0.0019 24.1 10.2 78 85-171 8-93 (114)
106 4hyz_A Uncharacterized protein 54.6 56 0.0019 23.3 8.8 50 84-142 14-63 (114)
107 3soa_A Calcium/calmodulin-depe 51.6 34 0.0012 29.6 6.7 67 85-151 319-386 (444)
108 1of5_A MRNA export factor MEX6 47.3 6.2 0.00021 32.3 1.2 33 83-116 11-43 (221)
109 1q40_B MEX67, mRNA export fact 38.1 17 0.00058 29.6 2.4 32 84-116 15-46 (219)
110 1q42_A MTR2, mRNA transport re 35.7 34 0.0012 27.8 3.8 53 83-137 26-98 (201)
111 2cw9_A Translocase of inner mi 31.9 18 0.00062 28.4 1.6 29 86-114 61-90 (194)
No 1
>3mg1_A OCP, orange carotenoid protein; carotenoid binding protein, echinone, phycobilisome; HET: ECH; 1.65A {Synechocystis SP} PDB: 3mg2_A* 3mg3_A* 1m98_A*
Probab=99.89 E-value=1.4e-24 Score=188.35 Aligned_cols=127 Identities=14% Similarity=0.234 Sum_probs=109.3
Q ss_pred cccCCCCCcEEEecccccccccc-------ccCC-CCCCCCCCCC----CCcHHHHHHHHHHHHhCCCHHHHHhhhccCc
Q 030319 46 RKRLAPLSKLRISSSENNRTAVD-------VASP-LPTTSNVDGD----DGGGAVVVRRFYAGINGRDLASVEELIADDC 113 (179)
Q Consensus 46 ~~~l~~~qqi~v~~~~~~~~~~~-------v~~p-~~~t~~~~~~----~~~~~~vVrrfyeA~Na~D~dal~eLfApD~ 113 (179)
.|+||.+|||||+||.|++|||| |+|| |+||++++|. .|..+.+|++|++++|++|++++.+||++|+
T Consensus 142 I~~Ldf~QQItvlR~~V~~MG~dp~~~~~~~~~~~~~~~~~~~~~~~~i~gi~~~tVl~Y~e~lNa~Df~a~aaLFA~Dg 221 (323)
T 3mg1_A 142 IQGLESGQQITVLRNAVVDMGFTAGKDGKRIAEPVVPPQDTASRTKVSIEGVTNATVLNYMDNLNANDFDTLIELFTSDG 221 (323)
T ss_dssp HHTSCHHHHHHHHHHHHHTCCC-------CBCCCCCCCCCGGGCCCCCBBTBCCHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHcCChhhhHHHHHHHHHHcCCCCCcccccccCCccCCCCcccccccCccCcchHHHHHHHHHhcccCHHHHHHHccCCC
Confidence 39999999999999999999999 8999 9999999983 3888999999999999999999999999999
Q ss_pred eEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeeecCCCceEEEEEEEE--eCCcee
Q 030319 114 VYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSANGKESHFL--SAKVAA 173 (179)
Q Consensus 114 v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~egD~~aV~v~w~le--w~~~~~ 173 (179)
+.+ |||+.|++|+|+|++||++.++++...++-.+.+..++++.+++++..++ |-++..
T Consensus 222 ~Le-pPf~~PIvGreAI~~y~~~eaq~~~l~P~~g~~ep~e~g~~qi~vtGkVqTpwfGv~v 282 (323)
T 3mg1_A 222 ALQ-PPFQRPIVGKENVLRFFREECQNLKLIPERGVTEPAEDGFTQIKVTGKVQTPWFGGNV 282 (323)
T ss_dssp EEE-CTTSCCEESHHHHHHHHHHHCTTCEEEEEEEEEEECGGGCEEEEEEEEEECTTTGGGC
T ss_pred eeC-CCCCCCccCHHHHHHHHHHHhccCEEeeccCccccccCCCceEEEEEEEEcccCCccc
Confidence 999 68889999999999999999998776777777777666667766655544 444433
No 2
>4h3u_A Hypothetical protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.15A {Catenulispora acidiphila}
Probab=99.65 E-value=3e-16 Score=120.64 Aligned_cols=83 Identities=18% Similarity=0.203 Sum_probs=72.1
Q ss_pred CCcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCCCceEE
Q 030319 83 DGGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSSANG 161 (179)
Q Consensus 83 ~~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD~~aV~ 161 (179)
.+.+.++|++|++|||++|++++.+||+||++|+||+++++++|++++++|++.+..+++ ++++++.++. +|| .+.
T Consensus 24 ~mt~~eiv~~y~~A~n~~D~d~~~~l~a~D~v~~d~~~g~~~~Greai~~~~~~~~~~~~-d~~~~v~~~~~~gd--~v~ 100 (158)
T 4h3u_A 24 AMTTPEIVTAWAAAWTGTNPNALGTLFAADGTYVDHAIGATMTGREQISGWKARTDAMIE-NVHVTITKAYRAGD--HVT 100 (158)
T ss_dssp -CCCCHHHHHHHHHHHSSCHHHHHTTEEEEEEEEETTTTEEEESHHHHHHHHHHHHHHEE-EEEEEEEEEEEETT--EEE
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHhcccceEeccCCCceEecchhhhhhhhhhhccCC-ccceeEeEEeecCc--eEE
Confidence 366789999999999999999999999999999999998889999999999999999997 8999999864 666 555
Q ss_pred EEEEEEe
Q 030319 162 KESHFLS 168 (179)
Q Consensus 162 v~w~lew 168 (179)
++|+++.
T Consensus 101 ~~~~~~g 107 (158)
T 4h3u_A 101 IEAVYGG 107 (158)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 5555543
No 3
>3ff2_A Uncharacterized cystatin fold protein (YP_497570. NTF2 superfamily; structural genomics; 1.90A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.59 E-value=7.4e-15 Score=107.24 Aligned_cols=83 Identities=12% Similarity=0.017 Sum_probs=72.7
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEee-ecCCCceEEE
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDI-SAEDSSANGK 162 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev-~egD~~aV~v 162 (179)
++++++|++|+++||++|++++.++++||+++|+|+.+....|+++++++++.++.++| +++++++.+ .+|| .|.+
T Consensus 2 m~~~~~v~~~~~a~n~~D~~~~~~~~a~D~v~h~~~~~~~~~G~~~~~~~~~~~~~~~p-~~~~~i~~~~~~Gd--~V~~ 78 (117)
T 3ff2_A 2 MSNLETAKAMIAAYNAQDVDTYVSYMTDDACEANYRGDVVREGKEGTRSGLAAAFARWP-QNHAEIKDAQQVGT--YVLM 78 (117)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEETTSCEEECHHHHHHHHHHHHHHHCT-TCEEEEEEEEEETT--EEEE
T ss_pred cCHHHHHHHHHHHHcccCHHHHHHhcCCcEEEEeCCCCccccCHHHHHHHHHHHHhhCC-CceEEEEEEEEECC--EEEE
Confidence 57899999999999999999999999999999998776668999999999999999997 789999985 5676 6666
Q ss_pred EEEEEeC
Q 030319 163 ESHFLSA 169 (179)
Q Consensus 163 ~w~lew~ 169 (179)
+|+++..
T Consensus 79 ~~~~~~~ 85 (117)
T 3ff2_A 79 REHVTRG 85 (117)
T ss_dssp EEEEECC
T ss_pred EEEEEec
Confidence 7776653
No 4
>3fh1_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.51 E-value=4.9e-14 Score=104.65 Aligned_cols=81 Identities=23% Similarity=0.346 Sum_probs=69.6
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCC---CCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCCCce
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLI---FPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSSA 159 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~---~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD~~a 159 (179)
..++++|++||++||++|++++.+||+||++|++|. .+.+++|++++++++.. +.+++ +++++++++. +|| .
T Consensus 17 ~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~v~~~p~~~~~g~~~~G~~~i~~~~~~-~~~~~-~~~~~i~~~~~~gd--~ 92 (129)
T 3fh1_A 17 EQTAEIMRRFNDVFQLHDPAALPELIAEECVIENTVPAPDGARHAGRQACVQLWSA-IATQP-GTRFDLEETFVAGD--R 92 (129)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGHHHHEEEEEEEECSCSTTTCCEEESHHHHHHHHHH-HHHCT-TCEEEEEEEEEETT--E
T ss_pred hhHHHHHHHHHHHHHccCHHHHHHhcCCCEEEECCCCCCCCCcccCHHHHHHHHHH-HhcCC-CceEEEeEEEEcCC--E
Confidence 468899999999999999999999999999999874 34567999999999999 88897 7899998864 565 6
Q ss_pred EEEEEEEEe
Q 030319 160 NGKESHFLS 168 (179)
Q Consensus 160 V~v~w~lew 168 (179)
+.++|+++-
T Consensus 93 v~~~~~~~~ 101 (129)
T 3fh1_A 93 ATIRWRYWM 101 (129)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEEC
Confidence 777887754
No 5
>3f9s_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative; 1.76A {Acidithiobacillus ferrooxidans atcc 23}
Probab=99.49 E-value=1.1e-13 Score=104.19 Aligned_cols=83 Identities=13% Similarity=0.103 Sum_probs=70.9
Q ss_pred CcHHHHHHHHHH-HHhCCCHHHHHhhhccCce-EeeCC--CCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCCCc
Q 030319 84 GGGAVVVRRFYA-GINGRDLASVEELIADDCV-YEDLI--FPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSS 158 (179)
Q Consensus 84 ~~~~~vVrrfye-A~Na~D~dal~eLfApD~v-~~dp~--~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD~~ 158 (179)
..++++|++||+ +||++|++++.++|+||++ +|+|. ++++..|+++++++++.+..++| +++++++++. +||
T Consensus 6 ~~~~~~v~~~~~~~~~~~d~~~~~~~~a~d~~~~~~p~~~~~g~~~G~~~~~~~~~~~~~~~p-d~~~~i~~~~~~gd-- 82 (146)
T 3f9s_A 6 SKAKEILTQFTREVWSEGNIEASDKYIAPKYTVLHDPGDPWEGRELDVAGYKERVKTLRAAFP-DQCFDIQGLFADGD-- 82 (146)
T ss_dssp TTHHHHHHHHHHHHTTTCCGGGHHHHEEEEEEEEECTTCTTTTCEECHHHHHHHHHHHHHHST-TCEEEEEEEEEETT--
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHcCCCeeeccCCCCCCCCCcCCHHHHHHHHHHHHhhCC-CcEEEEEEEEEeCC--
Confidence 569999999996 8999999999999999999 89884 45678999999999999999997 7999999965 566
Q ss_pred eEEEEEEEEeC
Q 030319 159 ANGKESHFLSA 169 (179)
Q Consensus 159 aV~v~w~lew~ 169 (179)
.|.++|+++..
T Consensus 83 ~v~~~~~~~gt 93 (146)
T 3f9s_A 83 AVVMTWLWTAT 93 (146)
T ss_dssp EEEEEEEEEEE
T ss_pred EEEEEEEEEEE
Confidence 56666666543
No 6
>3ebt_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; 1.30A {Burkholderia pseudomallei K96243} SCOP: d.17.4.9
Probab=99.49 E-value=5.1e-14 Score=103.44 Aligned_cols=81 Identities=16% Similarity=0.242 Sum_probs=69.2
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeC----CCC--CCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCC
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDL----IFP--RPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AED 156 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp----~~~--~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD 156 (179)
..++++|++||++||++|++++.++|+||++|++| |++ ++++|+++++++++.+.+.++ +++++++++. +||
T Consensus 3 ~~~~~~v~~~~~a~~~~d~~~~~~l~a~D~~~~~~~~~~p~~~~~~~~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gd 81 (132)
T 3ebt_A 3 SNNMQTVRESYEAFHRRDLPGVLAALAPDVRWTHPDGMSPYGLGGTKHGHDEVIAFIRHVPTHIA-EMRLAPDEFIESGE 81 (132)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEECGGGGGGTCCEEEEHHHHHHHHHHHGGGTEE-EEEEEEEEEEEETT
T ss_pred chHHHHHHHHHHHHhccCHHHHHHhcCCCEEEEeCCCCCCcccCCcCcCHHHHHHHHHHHHhhCC-ceEEEEeEEEEeCC
Confidence 35899999999999999999999999999999987 333 678999999999999999997 7899998864 666
Q ss_pred CceEEEEEEEE
Q 030319 157 SSANGKESHFL 167 (179)
Q Consensus 157 ~~aV~v~w~le 167 (179)
.|.++|+.+
T Consensus 82 --~v~v~~~~~ 90 (132)
T 3ebt_A 82 --RIVVLGTRR 90 (132)
T ss_dssp --EEEEEEEEE
T ss_pred --EEEEEEEEE
Confidence 555666654
No 7
>3k0z_A Putative polyketide cyclase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS lipoprotein; HET: NHE; 1.91A {Bacillus cereus}
Probab=99.49 E-value=1.2e-13 Score=107.11 Aligned_cols=81 Identities=14% Similarity=0.127 Sum_probs=69.5
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCCCceEEE
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSSANGK 162 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD~~aV~v 162 (179)
..++++|++||++||++|++++.++|+||+++|+|+.+ +..|+++++++++.++.+|| +++++++++. +|| .|.+
T Consensus 34 ~~n~~~v~~~~~a~~~~d~~~l~~~~a~D~v~~~p~~g-~~~G~e~~~~~~~~~~~~~p-d~~~~i~~~~~~gd--~v~~ 109 (159)
T 3k0z_A 34 TEMVHAAQRFYAFWDTGKEELIPQTVTENFFDHTLPKG-RPQGTEGLKFAAQNFRKIVP-NIHCEIEDLLVVGD--KVTA 109 (159)
T ss_dssp HHHHHHHHHHHHHHHHCCGGGHHHHEEEEEEESSCCTT-CCSSHHHHHHHHHHHHTTCC-SEEEEEEEEEEETT--EEEE
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHcCCCeEEecCCCC-CCCCHHHHHHHHHHHHHhCC-CcEEEEEEEEEECC--EEEE
Confidence 56899999999999999999999999999999987644 68999999999999999997 8999999964 666 5555
Q ss_pred EEEEEe
Q 030319 163 ESHFLS 168 (179)
Q Consensus 163 ~w~lew 168 (179)
+|+++.
T Consensus 110 ~~~~~g 115 (159)
T 3k0z_A 110 RLSFTG 115 (159)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555543
No 8
>3kkg_A Putative snoal-like polyketide cyclase; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, lyase; HET: MSE PGE; 1.40A {Jannaschia SP}
Probab=99.47 E-value=8.5e-14 Score=104.97 Aligned_cols=84 Identities=13% Similarity=0.174 Sum_probs=71.7
Q ss_pred CCcHHHHHHHHHH-HHhCCC--HHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCCCc
Q 030319 83 DGGGAVVVRRFYA-GINGRD--LASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSS 158 (179)
Q Consensus 83 ~~~~~~vVrrfye-A~Na~D--~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD~~ 158 (179)
...++++|++||+ +||++| ++++.++|+||+++|+++. ++..|++++++++..++.+|| +++++++++. +||
T Consensus 8 ~~~n~~~v~~~~~~~~~~~d~~~~~~~~~~a~d~~~~~~~~-~~~~G~~~~~~~~~~~~~~~p-d~~~~i~~~~~~gd-- 83 (146)
T 3kkg_A 8 ETQNVETVLRLFDEGWGAQDGWRDVWRETMTPGFRSIFHSN-QAVEGIEQAIAFNAVLFEGFP-RLEVVVENVTVEGD-- 83 (146)
T ss_dssp C-CHHHHHHGGGTTTSTTSTTHHHHHHHHEEEEEEEEETTS-CCEESHHHHHHHHHHHHHHST-TCEEEEEEEEEETT--
T ss_pred hHHHHHHHHHHHHHHHcCCCcHHHHHHHHcCCCeEEecCCC-CCCCCHHHHHHHHHHHHHhCC-CceeEEEEEEEeCC--
Confidence 3679999999999 899999 9999999999999997655 568999999999999999997 7999999965 565
Q ss_pred eEEEEEEEEeCC
Q 030319 159 ANGKESHFLSAK 170 (179)
Q Consensus 159 aV~v~w~lew~~ 170 (179)
.|.++|+++..+
T Consensus 84 ~v~~~~~~~gt~ 95 (146)
T 3kkg_A 84 NVVVQARLTGAQ 95 (146)
T ss_dssp EEEEEEEEEEEC
T ss_pred EEEEEEEEEEEe
Confidence 666777766544
No 9
>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=99.46 E-value=3.3e-13 Score=102.57 Aligned_cols=79 Identities=15% Similarity=0.074 Sum_probs=68.4
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCCCceEEEE
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSSANGKE 163 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD~~aV~v~ 163 (179)
.++++|++||++||++|++++.++|+||+++++| +++.+|+++++++++.++.++| ++++++.++. +|| .|.++
T Consensus 5 ~~~~~v~~~~~a~~~~d~~~~~~~~a~D~v~~~~--~~~~~G~~~~~~~~~~~~~~~~-~~~~~i~~~~~~gd--~v~~~ 79 (152)
T 2gex_A 5 ANKERCLEMVAAWNRWDVSGVVAHWAPDVVHYDD--EDKPVSAEEVVRRMNSAVEAFP-DLRLDVRSIVGEGD--RVMLR 79 (152)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECT--TSCEECHHHHHHHHHHHHHHCT-TCEEEEEEEEEETT--EEEEE
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHcCCCeEEeCC--CCCCCCHHHHHHHHHHHHHhCC-CcEEEEEEEEEeCC--EEEEE
Confidence 4789999999999999999999999999999987 4578999999999999999997 7999999864 666 55566
Q ss_pred EEEEe
Q 030319 164 SHFLS 168 (179)
Q Consensus 164 w~lew 168 (179)
|+++.
T Consensus 80 ~~~~g 84 (152)
T 2gex_A 80 ITCSA 84 (152)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66553
No 10
>2k54_A Protein ATU0742; protein of unknown function, structural genomics, PSI-2, Pro structure initiative; NMR {Agrobacterium tumefaciens str} SCOP: d.17.4.29
Probab=99.45 E-value=2.4e-13 Score=99.52 Aligned_cols=81 Identities=14% Similarity=-0.005 Sum_probs=68.2
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEee-ecCCCceEEEE
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDI-SAEDSSANGKE 163 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev-~egD~~aV~v~ 163 (179)
.+++++++||+|||++|++++.++|+||+++++++.+.+++|++++++|++.++.+ | ++++++.++ .+|| .|.++
T Consensus 4 ~~~~~v~~~~~a~n~~D~~~~~~~~a~D~~~~~~~g~~~~~G~~ai~~~~~~~~~~-~-~~~~~~~~~~~~gd--~v~~~ 79 (123)
T 2k54_A 4 EIELPVQKQLEAYNARDIDAFMAWWADDCQYYAFPATLLAGNAAEIRVRHIERFKE-P-DLYGELLTRVIVGN--VVIDH 79 (123)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHTEEEEEEEEETTTEEEEESHHHHHHHHHHHTTC-T-TCEEEEEEEEEETT--EEEEE
T ss_pred CHHHHHHHHHHHHHhcCHHHHHhhcCCceEEEcCCCCcccCCHHHHHHHHHHHcCC-C-CcEEEEEEEEEECC--EEEEE
Confidence 47889999999999999999999999999999876433589999999999998877 5 789999885 4565 66667
Q ss_pred EEEEeC
Q 030319 164 SHFLSA 169 (179)
Q Consensus 164 w~lew~ 169 (179)
|+++..
T Consensus 80 ~~~~g~ 85 (123)
T 2k54_A 80 ETVTRN 85 (123)
T ss_dssp EEEECC
T ss_pred EEEEeE
Confidence 777653
No 11
>2f99_A Aklanonic acid methyl ester cyclase, AKNH; anthracycline,polyketide cyclase,stereoselectivity, aklavino biosynthetic protein; HET: AKV; 1.90A {Streptomyces galilaeus} SCOP: d.17.4.9 PDB: 2f98_A*
Probab=99.45 E-value=9.4e-14 Score=106.30 Aligned_cols=84 Identities=12% Similarity=0.045 Sum_probs=72.5
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCCCceEEE
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSSANGK 162 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD~~aV~v 162 (179)
..++++|++||++||++|++++.++|+||+++++|+.+.++.|+++++++++.+..++|.+++++++++. +|| .|.+
T Consensus 11 ~~~~~~v~~~~~a~~~~d~~~~~~~~a~D~v~~~p~~~~~~~G~~~~~~~~~~~~~~~p~d~~~~i~~~~~~gd--~v~~ 88 (153)
T 2f99_A 11 SEQIAAVRRMVEAYNTGKTDDVADYIHPEYMNPGTLEFTSLRGPELFAINVAWVKKTFSEEARLEEVGIEERAD--WVRA 88 (153)
T ss_dssp CHHHHHHHHHHHHHHHCCCTTGGGTEEEEEECGGGTTTCCCCHHHHHHHHHHHHHHHHCTTCEEEEEEEEEETT--EEEE
T ss_pred hHHHHHHHHHHHHHhCCCHHHHHHhcCCCeEEecCCCCCCCCCHHHHHHHHHHHHHHCCCCcEEEEEEEEEeCC--EEEE
Confidence 6789999999999999999999999999999999876644689999999999999999647899999964 565 6667
Q ss_pred EEEEEeC
Q 030319 163 ESHFLSA 169 (179)
Q Consensus 163 ~w~lew~ 169 (179)
+|+++..
T Consensus 89 ~~~~~gt 95 (153)
T 2f99_A 89 RLVLYGR 95 (153)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 7776654
No 12
>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}
Probab=99.44 E-value=8.4e-14 Score=102.45 Aligned_cols=79 Identities=15% Similarity=0.155 Sum_probs=66.7
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCC-------CCCccCHHHHHHHHHHHHHhcCCCeEEEEEeeecCCC
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIF-------PRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDS 157 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~-------~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~egD~ 157 (179)
.+++++++|+++||++|++++.+||+||++|++|+. +++++|++++++||+.+++++| ++++++.++..+ .
T Consensus 9 ~~~~~~~~~~~a~n~~D~~~l~~l~a~D~v~~~p~~~~~~g~~~~~~~G~~ai~~~~~~~~~~~~-~~~~~~~~~~~~-~ 86 (122)
T 3h3h_A 9 FAQQFSREWIDAWNAHDLDAILSHYADGFEMSSPMIVQIAGEPSGRLRGKEQVGAYWREALRMIP-DLHFEWIATLAG-V 86 (122)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECHHHHHHHC-CCCEEEHHHHHHHHHHHHHHHCT-TCCCEEEEEEEC-S
T ss_pred HHHHHHHHHHHHHhccCHHHHHHhcCCCEEEECCCcccccCCCCCcEEcHHHHHHHHHHHHHHCC-CcEEEEEEEEec-C
Confidence 357899999999999999999999999999998742 2578999999999999999997 789999886554 2
Q ss_pred ceEEEEEE
Q 030319 158 SANGKESH 165 (179)
Q Consensus 158 ~aV~v~w~ 165 (179)
..+.++|+
T Consensus 87 ~~~~~~~~ 94 (122)
T 3h3h_A 87 DSVAIHYR 94 (122)
T ss_dssp SEEEEEEE
T ss_pred cEEEEEEE
Confidence 45555665
No 13
>1sjw_A Nogalonic acid methyl ester cyclase; anthracyclines, nogalamycin, snoal, aldol condensation, LYAS structural genomics; HET: NGV; 1.35A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=99.44 E-value=8.3e-14 Score=103.95 Aligned_cols=84 Identities=15% Similarity=0.089 Sum_probs=71.1
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCCCceEEEE
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSSANGKE 163 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD~~aV~v~ 163 (179)
.++++|++||++||++|++.+.++|+||+++++|+.+.+..|+++++++++.+.++++.+++++++++. +|| .|.++
T Consensus 3 ~~~~~v~~~~~a~~~~d~~~~~~~~a~d~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~gd--~v~~~ 80 (144)
T 1sjw_A 3 RQTEIVRRMVSAFNTGRTDDVDEYIHPDYLNPATLEHGIHTGPKAFAQLVGWVRATFSEEARLEEVRIEERGP--WVKAY 80 (144)
T ss_dssp HHHHHHHHHHHHHHHCCCTTGGGTEEEEEECGGGGGGTCCSHHHHHHHHHHHHHHHHCTTCEEEEEEEEEETT--EEEEE
T ss_pred hHHHHHHHHHHHHhCCCHHHHHHHcCcCeEEccCCCCCCCCCHHHHHHHHHHHHHhCCCCcEEEEEEEEEeCC--EEEEE
Confidence 578999999999999999999999999999998765543489999999999999999647899999865 565 66677
Q ss_pred EEEEeCC
Q 030319 164 SHFLSAK 170 (179)
Q Consensus 164 w~lew~~ 170 (179)
|+++..+
T Consensus 81 ~~~~gt~ 87 (144)
T 1sjw_A 81 LVLYGRH 87 (144)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 7776544
No 14
>3ec9_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.60A {Burkholderia thailandensis E264} SCOP: d.17.4.10
Probab=99.43 E-value=5.5e-13 Score=99.42 Aligned_cols=82 Identities=15% Similarity=0.245 Sum_probs=68.4
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCC---CCCCccCHHHHH-HHHHHHHHhcCCCeEEEEEeee-cCCCc
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLI---FPRPFLGRKATL-DFFKKFSDSISSDLQFVIDDIS-AEDSS 158 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~---~~~Pi~Greav~-~ff~~~~~afp~dl~~~I~ev~-egD~~ 158 (179)
..++++|++||++++++|++++.+||+||++|++|+ ++++++|+++++ +||+.+...++ +++++++++. +||
T Consensus 12 ~~~~~~v~~~~~a~~~gD~~~~~~l~a~D~~~~~~~~~p~~g~~~G~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~gd-- 88 (140)
T 3ec9_A 12 RTPYQIVADHYAASDRHDPAAMMADIAPAIEWTEMAGFPCAGTYRSADEIVRNVFRRLGEEWD-GYTFKLDALHDAGD-- 88 (140)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEECTTSTTCEEECSHHHHHHHTHHHHHHHEE-EEEEEEEEEEEETT--
T ss_pred chHHHHHHHHHHHHhCCCHHHHHHhcCCCeEEEEcCCCccceEEcCHHHHHHHHHHHHHhhCC-cceeEEEEEEEcCC--
Confidence 568999999999999999999999999999999874 335689999995 79999999996 7899999865 565
Q ss_pred eEEEEEEEEe
Q 030319 159 ANGKESHFLS 168 (179)
Q Consensus 159 aV~v~w~lew 168 (179)
.|.++|++..
T Consensus 89 ~v~v~~~~~~ 98 (140)
T 3ec9_A 89 TVIGVGRYSG 98 (140)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEE
Confidence 5555555544
No 15
>3g8z_A Protein of unknown function with cystatin-like FO; NP_639274.1, snoal-like polyketide cyclase; HET: MSE; 1.90A {Xanthomonas campestris PV}
Probab=99.43 E-value=9.4e-13 Score=100.55 Aligned_cols=89 Identities=15% Similarity=0.120 Sum_probs=70.0
Q ss_pred CCcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCC---CCCccCHHHHHHHHHHHHHhcCCCeEEEE-Eee-ecCCC
Q 030319 83 DGGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIF---PRPFLGRKATLDFFKKFSDSISSDLQFVI-DDI-SAEDS 157 (179)
Q Consensus 83 ~~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~---~~Pi~Greav~~ff~~~~~afp~dl~~~I-~ev-~egD~ 157 (179)
...++++|++||+++|++|++++.+||+||++|++|+. +++++|+++++++++.+...++..++++. +++ .+||.
T Consensus 19 ~~~n~~~v~~~~~a~~~gD~~~l~~l~a~D~v~~~p~~~~~~g~~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~gd~ 98 (148)
T 3g8z_A 19 GMNTIDIAKSYITAIQTGDHATLGSIISPDVIWHQPGNHQFSGTHRGMAVVGPMLGKMMEVSNGTFAISRADDYMASGDW 98 (148)
T ss_dssp -CCHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEECSSSTTCEEEESHHHHHHHHHHHHHHTTTCCEEEEEEEEEEETTE
T ss_pred CcchHHHHHHHHHHHhcCCHHHHHHHcCCCEEEEcCCCCCCCceEcCHHHHHHHHHHHHHhcCCceEEEecceEEecCCE
Confidence 36799999999999999999999999999999998753 24579999999999999999975577764 664 56764
Q ss_pred ceEEEEEEEEeCCc
Q 030319 158 SANGKESHFLSAKV 171 (179)
Q Consensus 158 ~aV~v~w~lew~~~ 171 (179)
+.+..+|+++..+.
T Consensus 99 v~v~~~~~~~~~G~ 112 (148)
T 3g8z_A 99 VAITLEFSGQANGV 112 (148)
T ss_dssp EEEEEEEEEEETTE
T ss_pred EEEEEEEEEEeCCc
Confidence 44444555554443
No 16
>3g16_A Uncharacterized protein with cystatin-like fold; YP_001022489.1, protein of unknown function with cystatin-LI structural genomics; HET: MSE; 1.45A {Methylibium petroleiphilum PM1}
Probab=99.42 E-value=8.9e-13 Score=104.55 Aligned_cols=84 Identities=15% Similarity=0.218 Sum_probs=69.9
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCC-C-CCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCCCceE
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLI-F-PRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSSAN 160 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~-~-~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD~~aV 160 (179)
..++++|++||++||++|++++.+||+|||++|.|+ . +++++|+|+++++|+.+...+ +.+++++.+. +.|+..+
T Consensus 10 ~~~~~~v~ry~~A~n~gD~d~l~~l~aeD~v~~~p~~~p~~~~~Greai~~~f~~~~~~~--d~~~~~e~i~v~~dG~~a 87 (156)
T 3g16_A 10 AAMEKVIRTYYDGCNEADEAKMIACFVPEAVHYFPAGMYGGAFRGAAQIAHRWRTAVETL--GSYWTIDALVIDAETAEA 87 (156)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECBTTSTTSCEESHHHHHHHHHHHHHHH--CEEEEEEEEEEETTTTEE
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHhcCCCEEEecCCCCCCCCccCHHHHHHHHHHHHhhc--CceEEEEEEEEecCCCEE
Confidence 468999999999999999999999999999999765 2 557899999999999999887 4799988853 4223466
Q ss_pred EEEEEEEeC
Q 030319 161 GKESHFLSA 169 (179)
Q Consensus 161 ~v~w~lew~ 169 (179)
.+.|++...
T Consensus 88 v~Ewt~~~T 96 (156)
T 3g16_A 88 AIEWTHFKT 96 (156)
T ss_dssp EEEEEEEEG
T ss_pred EEEEEEEEe
Confidence 788887643
No 17
>3ehc_A Snoal-like polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.12A {Agrobacterium tumefaciens str}
Probab=99.41 E-value=2.6e-13 Score=100.23 Aligned_cols=81 Identities=12% Similarity=0.125 Sum_probs=69.8
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCCCceEEE
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSSANGK 162 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD~~aV~v 162 (179)
..++++|++||++||++|++.+.++++||+++++ +..|+++++++++.++.++| +++++++++. +|| .|.+
T Consensus 3 ~~~~~~v~~~~~~~~~~d~~~~~~~~a~d~~~~~-----~~~G~~~~~~~~~~~~~~~p-d~~~~i~~~~~~gd--~v~~ 74 (128)
T 3ehc_A 3 QTLNDIYLAYLDSLNHQAFDELGTFVDDNVEHNG-----RPFGLSGYRDMLVKDFADIP-DLRFEAEILVSDAT--RLAA 74 (128)
T ss_dssp CCHHHHHHHHHHHHHTTCGGGGGGTEEEEEEETT-----BCCHHHHHHHHHHHHHHHCT-TCCCCEEEEEECSS--EEEE
T ss_pred hHHHHHHHHHHHHHhcCCHHHHHHhcCcceEeCC-----CCCCHHHHHHHHHHHHhhCC-CceEEEEEEEEECC--EEEE
Confidence 3589999999999999999999999999999983 46899999999999999997 7999999965 555 7777
Q ss_pred EEEEEeCCce
Q 030319 163 ESHFLSAKVA 172 (179)
Q Consensus 163 ~w~lew~~~~ 172 (179)
+|+++..+..
T Consensus 75 ~~~~~gt~~g 84 (128)
T 3ehc_A 75 RLFFDCTPKS 84 (128)
T ss_dssp EEEEEECCSS
T ss_pred EEEEEEEEcC
Confidence 8887766543
No 18
>2a15_A Hypothetical protein RV0760C; beta-alpha-barrel, structural genomics, PSI, protein structure initiative; 1.68A {Mycobacterium tuberculosis} SCOP: d.17.4.3 PDB: 2z76_A* 2z77_A* 2z7a_A
Probab=99.41 E-value=1.4e-12 Score=96.91 Aligned_cols=82 Identities=20% Similarity=0.208 Sum_probs=68.6
Q ss_pred CCcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCC-------ccCHHHHHHHHHHHHHhcCCCeEEEEEe-e--
Q 030319 83 DGGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRP-------FLGRKATLDFFKKFSDSISSDLQFVIDD-I-- 152 (179)
Q Consensus 83 ~~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~P-------i~Greav~~ff~~~~~afp~dl~~~I~e-v-- 152 (179)
...+++++++|+++||++|++++.+||+||+++++|..+.| ++|++++++||+.+++.+ ++++++++ .
T Consensus 6 ~~~~~~~v~~~~~a~~~~D~~~~~~l~a~D~v~~~p~~~~~~~~~g~~~~G~~ai~~~~~~~~~~~--~~~~~~~~~~i~ 83 (139)
T 2a15_A 6 QSPALIASQSSWRCVQAHDREGWLALMADDVVIEDPIGKSVTNPDGSGIKGKEAVGAFFDTHIAAN--RLTVTCEETFPS 83 (139)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEESSSSSBTTBTTSSCEESHHHHHHHHHHHTTTT--TCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHhcCCCEEEECCCCCCccCCCCceeecHHHHHHHHHHhcccc--eeEEeccCceEe
Confidence 35688999999999999999999999999999998765545 799999999999999887 68888764 3
Q ss_pred ecCCCceEEEEEEEEe
Q 030319 153 SAEDSSANGKESHFLS 168 (179)
Q Consensus 153 ~egD~~aV~v~w~lew 168 (179)
..| ..+.++|+++.
T Consensus 84 ~~g--~~~~~~~~~~~ 97 (139)
T 2a15_A 84 SSP--DEIAHILVLHS 97 (139)
T ss_dssp SST--TEEEEEEEEEE
T ss_pred ecC--CEEEEEEEEEE
Confidence 344 46778888764
No 19
>3dm8_A Uncharacterized protein RPA4348; siras, putative isomerase, structural genomics, PSI-2, prote structure initiative; HET: CE9; 1.80A {Rhodopseudomonas palustris} SCOP: d.17.4.20
Probab=99.41 E-value=5.8e-13 Score=100.98 Aligned_cols=83 Identities=17% Similarity=0.192 Sum_probs=68.1
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCC------CCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCC
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLI------FPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AED 156 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~------~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD 156 (179)
.+..+++++||+|||++|++++.+||+||++|++|+ +.++++|++++++||+.+.+.++ +.+++++++. +||
T Consensus 4 ~~~~~~v~~~~~a~~~gD~~~l~~l~a~Dv~~~~~g~~~~~p~~g~~~G~~av~~~~~~~~~~~~-~~~~~~~~~~~~gd 82 (143)
T 3dm8_A 4 HSLWRFSRALHRALNDRQTEELATIIDDNIDWAIYGPIDMFPFFGARQGKAAVLEVCRQIADSVR-IYRYHRESVMLGID 82 (143)
T ss_dssp CHHHHHHHHHHHHHHHCCCHHHHHHEEEEEEEEEESCTTTCTTCEEEESHHHHHHHHHHHHHHEE-EEEEEEEEEEECSS
T ss_pred chHHHHHHHHHHHHHCCCHHHHHHhcCCCeEEEecCCCCcCCCCccccCHHHHHHHHHHHHHhcC-cceEEEEEEEEcCC
Confidence 457899999999999999999999999999999864 23568999999999999999996 7899999865 566
Q ss_pred CceEEEEEEEE
Q 030319 157 SSANGKESHFL 167 (179)
Q Consensus 157 ~~aV~v~w~le 167 (179)
.+++..+++..
T Consensus 83 ~v~v~~~~~~~ 93 (143)
T 3dm8_A 83 SAASMVRYSLT 93 (143)
T ss_dssp EEEEEEEEEEE
T ss_pred eEEEEEEEEEE
Confidence 43434455544
No 20
>3f14_A Uncharacterized NTF2-like protein; YP_680363.1, NTF2-like protein of unknown function, structur genomics; HET: MSE TRS PGE; 1.45A {Cytophaga hutchinsonii atcc 33406}
Probab=99.41 E-value=4.1e-13 Score=98.13 Aligned_cols=78 Identities=13% Similarity=0.098 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCCCceEEEEEE
Q 030319 87 AVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSSANGKESH 165 (179)
Q Consensus 87 ~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD~~aV~v~w~ 165 (179)
.++|++||+|||++|++++.++++||++|+.++.+ ++.||++++++++.+...++ +++++++.+. +|| .|.+.++
T Consensus 3 ~~~v~~~~~a~~~gD~~~~~~~ladDv~w~~~g~~-~~~G~~~~~~~~~~~~~~~~-~~~~~i~~~i~~Gd--~Vvv~~~ 78 (112)
T 3f14_A 3 ETTHYSIAQHFSSGDFPAVYACFNDIIEWNIIGNQ-VVKGKADVIDFCNKMLPEMK-GAVLTNDNVIQNEN--QIVIEGK 78 (112)
T ss_dssp HHHHHHHHHHHHTTCGGGTGGGEEEEEEEEETTTE-EEESHHHHHHHHHHHHHHHH-TSEEEEEEEEECSS--EEEEEEE
T ss_pred hHHHHHHHHHHHcCCHHHHHHhcCCceEEEEcCCc-cEecHHHHHHHHHHHHhhcC-CcEEEEEEEEEeCC--EEEEEEE
Confidence 47899999999999999999999999999976654 68999999999999998886 5799999965 565 6777777
Q ss_pred EEe
Q 030319 166 FLS 168 (179)
Q Consensus 166 lew 168 (179)
+.+
T Consensus 79 ~~~ 81 (112)
T 3f14_A 79 CRY 81 (112)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 21
>3fgy_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.59A {Burkholderia xenovorans LB400} SCOP: d.17.4.0
Probab=99.40 E-value=1.9e-13 Score=100.96 Aligned_cols=82 Identities=12% Similarity=0.068 Sum_probs=68.2
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCC---CCCCccCHHHHHHHHHHHHHhcCCCeEEEEEee-ecCCCce
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLI---FPRPFLGRKATLDFFKKFSDSISSDLQFVIDDI-SAEDSSA 159 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~---~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev-~egD~~a 159 (179)
..++++|++||++||++|++++.+||+||++|++|+ ++++++|++++++||+.+...++ ++++++.++ .+|| .
T Consensus 5 ~~~~~~v~~~~~a~~~~d~~~~~~l~a~D~~~~~p~~~p~~g~~~G~~~i~~~~~~~~~~~~-~~~~~~~~~~~~gd--~ 81 (135)
T 3fgy_A 5 QENVQIVKDFFAAMGRGDKKGLLAVSAEDIEWIIPGEWPLAGTHRGHAALAALLQKASEMVE-ISYPEPPEFVAQGE--R 81 (135)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHTEEEEEEEEECSSSTTCEEEEHHHHHHHHHHHHHHHEE-EECSSCCEEEEETT--E
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHhcCCCeEEEEcCCCccceEEeCHHHHHHHHHHHHHhhC-cceeeeEEEEEcCC--E
Confidence 468999999999999999999999999999999875 34567999999999999999986 667787775 4565 5
Q ss_pred EEEEEEEEe
Q 030319 160 NGKESHFLS 168 (179)
Q Consensus 160 V~v~w~lew 168 (179)
|.+.|+++.
T Consensus 82 v~v~~~~~~ 90 (135)
T 3fgy_A 82 VLVVGFATG 90 (135)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEeE
Confidence 566666554
No 22
>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} SCOP: d.17.4.3 PDB: 1e3v_A* 1opy_A 1dmq_A 1dmm_A 1ea2_A 3cpo_A 1e3r_A* 1ogx_A 2inx_A 2pzv_A 1c7h_A 1dmn_A 1k41_A 1oho_A* 3fzw_A* 1cqs_A* 1w00_A 1e97_A 1w6y_A* 3ipt_A* ...
Probab=99.40 E-value=5.2e-13 Score=97.42 Aligned_cols=82 Identities=13% Similarity=0.163 Sum_probs=69.4
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCCCceE-E
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSSAN-G 161 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD~~aV-~ 161 (179)
...++++++|+++||++|++++.+||+||++|++|..+.+++|++++++|++.++..++ ++++++.++. +|| .+ .
T Consensus 7 ~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~~~~~p~~~~~~~G~~~i~~~~~~~~~~~~-~~~~~~~~~~~~g~--~~~~ 83 (131)
T 1oh0_A 7 QEVQGLMARYIELVDVGDIEAIVQMYADDATVEDPFGQPPIHGREQIAAFYRQGLGGGK-VRACLTGPVRASHN--GCGA 83 (131)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEESSTTSCCEEHHHHHHHHHHHHHSSSC-CEEEESSCCEECSS--SEEE
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHcCCCEEEEcCCCCCCcccHHHHHHHHHHHhhccc-eeEeecceEEECCC--eEEE
Confidence 34778999999999999999999999999999987655589999999999999999886 6888887754 454 55 6
Q ss_pred EEEEEEe
Q 030319 162 KESHFLS 168 (179)
Q Consensus 162 v~w~lew 168 (179)
++|+++.
T Consensus 84 ~~~~~~~ 90 (131)
T 1oh0_A 84 MPFRVEM 90 (131)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 7777665
No 23
>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} SCOP: d.17.4.9
Probab=99.37 E-value=2.3e-12 Score=98.84 Aligned_cols=78 Identities=15% Similarity=0.116 Sum_probs=68.1
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCCCceEEEE
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSSANGKE 163 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD~~aV~v~ 163 (179)
.++++|++||++||++|++.+.++|+||+++++| ++..|+++++++++.++.+++ ++++++.++. +|| .|.++
T Consensus 5 ~~~~~v~~~~~a~~~~D~~~~~~~~a~D~v~~~p---~~~~G~~~~~~~~~~~~~~~~-~~~~~i~~~~~~gd--~v~~~ 78 (158)
T 2gey_A 5 ERKALCLEMVAAWNRWDLSGIIKHWSPDIVHYSE---DNEVSSADMVKLMEGGLKAFP-DLQLEVKSIMAEED--RVALR 78 (158)
T ss_dssp HHHHHHHHHHHHHHTTCTHHHHTTEEEEEEEEET---TEEECHHHHHHHHHHHHHHST-TCEEEEEEEEEETT--EEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHcCCCeEEeCC---CCCCCHHHHHHHHHHHHHhCC-CcEEEEEEEEEeCC--EEEEE
Confidence 4789999999999999999999999999999994 357899999999999999997 7999999965 565 66677
Q ss_pred EEEEe
Q 030319 164 SHFLS 168 (179)
Q Consensus 164 w~lew 168 (179)
|+++.
T Consensus 79 ~~~~g 83 (158)
T 2gey_A 79 ITVTA 83 (158)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76654
No 24
>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A* 1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A* 3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A 3ov4_A* 3nm2_A
Probab=99.36 E-value=2.2e-12 Score=91.98 Aligned_cols=79 Identities=20% Similarity=0.246 Sum_probs=65.9
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEE-eee-cCCCceEEE
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVID-DIS-AEDSSANGK 162 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~-ev~-egD~~aV~v 162 (179)
.+++++++|+++||++|++++.+||+||++|++|+.+++++|+++++++++.++..++ ++++. .+. +|| .+.+
T Consensus 6 ~~~~~v~~~~~a~~~~D~~~~~~l~a~D~~~~~~~~~~~~~G~~~i~~~~~~~~~~~~---~~~~~~~~~~~g~--~~~~ 80 (125)
T 1ohp_A 6 HMTAVVQRYVAALNAGDLDGIVALFADDATVENPVGSEPRSGTAAIREFYANSLKLPL---AVELTQEVRAVAN--EAAF 80 (125)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEESSTTSCCEESHHHHHHHHHHHTSSCC---EEEECSCCEEETT--EEEE
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHcCCCeEEECCCCCCCccCHHHHHHHHHHhcccCc---eEEEeeeEEEeCC--EEEE
Confidence 4678999999999999999999999999999987656689999999999999988775 45576 754 555 6666
Q ss_pred EEEEEe
Q 030319 163 ESHFLS 168 (179)
Q Consensus 163 ~w~lew 168 (179)
+|+++.
T Consensus 81 ~~~~~~ 86 (125)
T 1ohp_A 81 AFIVSF 86 (125)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777664
No 25
>1nww_A Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {Rhodococcus erythropolis} SCOP: d.17.4.8 PDB: 1nu3_A*
Probab=99.34 E-value=8e-12 Score=93.78 Aligned_cols=79 Identities=20% Similarity=0.281 Sum_probs=66.3
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCe-EEEEEeee-cCCCceEE
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDL-QFVIDDIS-AEDSSANG 161 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl-~~~I~ev~-egD~~aV~ 161 (179)
..+++++++||++||++|++++.+||+||++|++++.+ +++|++++++|++.+...++ + ++++..+. +|| .+.
T Consensus 22 ~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~~~~~~~~~-~~~G~~~i~~~~~~~~~~~~--~~~~~~~~~~~~gd--~v~ 96 (149)
T 1nww_A 22 TPDEKIVLEFMDALTSNDAAKLIEYFAEDTMYQNMPLP-PAYGRDAVEQTLAGLFTVMS--IDAVETFHIGSSNG--LVY 96 (149)
T ss_dssp SHHHHHHHHHHHHGGGCCHHHHHTTBCSSCEEEETTSC-CEESHHHHHHHHHHHHHHEE--EEEEEEEEEEEETT--EEE
T ss_pred cCHHHHHHHHHHHHhcCCHHHHHHHhCCCEEEEcCCCC-CccCHHHHHHHHHHHHhhCC--cceEEEEEEEecCC--EEE
Confidence 56889999999999999999999999999999997654 68999999999999999886 7 88887754 565 444
Q ss_pred EEEEEE
Q 030319 162 KESHFL 167 (179)
Q Consensus 162 v~w~le 167 (179)
+.|...
T Consensus 97 ~~~~~~ 102 (149)
T 1nww_A 97 TERVDV 102 (149)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 455443
No 26
>3grd_A Uncharacterized NTF2-superfamily protein; NP_977240.1, NTF2-superfamily protein with unknown function, structural genomics; HET: MSE; 1.25A {Bacillus cereus atcc 10987} SCOP: d.17.4.0
Probab=99.34 E-value=4.5e-13 Score=99.00 Aligned_cols=82 Identities=12% Similarity=0.302 Sum_probs=66.9
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCC---CCCCccCHHHHH-HHHHHHHHhcCCCeEEEEEee--e-cCC
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLI---FPRPFLGRKATL-DFFKKFSDSISSDLQFVIDDI--S-AED 156 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~---~~~Pi~Greav~-~ff~~~~~afp~dl~~~I~ev--~-egD 156 (179)
..++++|++||++++++|++++.+||+||++|++|+ ++++++|+++++ +||+.+..+++ +++++++++ . +||
T Consensus 4 ~~~~~~v~~~~~a~~~~D~~~~~~l~a~D~~~~~~~~~p~~g~~~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gd 82 (134)
T 3grd_A 4 KANLEIIRSTYEGSASSNAKHLAEALSEKVEWTEAEGFPYGGTYIGVEAIMENVFSRLGSEWN-DYKASVNMYHEVSGKD 82 (134)
T ss_dssp CCHHHHHHTTTSSCHHHHHHHHHHHEEEEEEEEECTTSTTCEEEESHHHHHHHTHHHHHHHEE-EEEEEEEEEEEBTTSS
T ss_pred chHHHHHHHHHHHHhcCCHHHHHHhcCCCeEEEecCCcccCcEEeCHHHHHHHHHHHHHhhcc-ccccchhheeeecCCC
Confidence 468999999999999999999999999999999874 335689999998 59999999997 688888875 5 455
Q ss_pred CceEEEEEEEEe
Q 030319 157 SSANGKESHFLS 168 (179)
Q Consensus 157 ~~aV~v~w~lew 168 (179)
.|.++|+++.
T Consensus 83 --~v~v~~~~~~ 92 (134)
T 3grd_A 83 --VIIAEGMYSG 92 (134)
T ss_dssp --EEEEEEEEEE
T ss_pred --EEEEEEEEee
Confidence 4445555443
No 27
>3g0k_A Putative membrane protein; snoal-like polyketide cyclase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.30A {Novosphingobium aromaticivorans}
Probab=99.33 E-value=2.4e-12 Score=99.33 Aligned_cols=78 Identities=17% Similarity=0.122 Sum_probs=68.6
Q ss_pred CcHHHHHHHHHH-HHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCCCceEE
Q 030319 84 GGGAVVVRRFYA-GINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSSANG 161 (179)
Q Consensus 84 ~~~~~vVrrfye-A~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD~~aV~ 161 (179)
..++++|++||+ +||++|++++.++++||+++|+|.. ..|+++++++++.++.++| +++++++.+. +|| .|.
T Consensus 27 ~~nk~lV~~f~~~a~~~~D~~~~~~~~a~D~v~h~P~~---~~G~e~~~~~~~~~~~~~p-d~~~~i~~iiaeGD--~V~ 100 (148)
T 3g0k_A 27 QANHDLVIEMYNKVLIAMDSSAVDRYIAPGYVQHSSLA---EPSVEALKGFLDRVRAESP-DARQTIHRSFVDGD--HVI 100 (148)
T ss_dssp HHHHHHHHHHHHHTTTTTCGGGGGGTEEEEEEECCSSS---CSSHHHHHHHHHHHHHHCC-SCEEEEEEEEEETT--EEE
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHhcCcCeEEcCCCC---CCCHHHHHHHHHHHHHhCC-CceEEEEEEEEECC--EEE
Confidence 578999999999 8999999999999999999998654 3799999999999999997 7999999964 666 677
Q ss_pred EEEEEE
Q 030319 162 KESHFL 167 (179)
Q Consensus 162 v~w~le 167 (179)
++|+++
T Consensus 101 ~~~~~~ 106 (148)
T 3g0k_A 101 THTHVE 106 (148)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777766
No 28
>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}
Probab=99.33 E-value=3.5e-12 Score=98.03 Aligned_cols=84 Identities=15% Similarity=0.234 Sum_probs=69.9
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEee-ecCCCceEEE
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDI-SAEDSSANGK 162 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev-~egD~~aV~v 162 (179)
....+++++||++++++|++++.+||+||++|++|..+.|++|++++++||..++..++ .|.++.. ..+|+..+.+
T Consensus 9 ~~~~~~~~~~~~a~~~~D~~~l~~l~a~D~v~~~P~~~~~~~G~~~v~~~~~~~~~~~~---~f~~~~~~~~~dg~~~~~ 85 (143)
T 3mso_A 9 ANAAATLAEWHGLIARRDLSGLPRLLHPDAVFRSPMAHKPYAGAPVVSMILNTVLTVFE---DFAYHRQLASADGRSVVL 85 (143)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTGGGGEEEEEEEECSSCSSCEESHHHHHHHHHHHHHHCE---EEEEEEEEEETTSSEEEE
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHhcCCCEEEECCCCCCCccCHHHHHHHHHHHHhhCC---ceEEEEEEEccCCCEEEE
Confidence 34788999999999999999999999999999998888899999999999999999986 4566554 3344567777
Q ss_pred EEEEEeCC
Q 030319 163 ESHFLSAK 170 (179)
Q Consensus 163 ~w~lew~~ 170 (179)
+|+++.++
T Consensus 86 ~f~~~~~g 93 (143)
T 3mso_A 86 EFSARVGE 93 (143)
T ss_dssp EEEEEETT
T ss_pred EEEEEECC
Confidence 77776544
No 29
>3hk4_A MLR7391 protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, lyase; HET: MSE; 1.96A {Mesorhizobium loti}
Probab=99.32 E-value=8.3e-12 Score=95.83 Aligned_cols=85 Identities=13% Similarity=-0.001 Sum_probs=69.5
Q ss_pred CCcHHHHHHHHHHHHhCCCH-HHHHhhhccCceEeeCCCC--CCccCHHHHHHHHHHHHHhcCCCeEEEEEee-ecCCCc
Q 030319 83 DGGGAVVVRRFYAGINGRDL-ASVEELIADDCVYEDLIFP--RPFLGRKATLDFFKKFSDSISSDLQFVIDDI-SAEDSS 158 (179)
Q Consensus 83 ~~~~~~vVrrfyeA~Na~D~-dal~eLfApD~v~~dp~~~--~Pi~Greav~~ff~~~~~afp~dl~~~I~ev-~egD~~ 158 (179)
...+++++++|+++++++|. +++.+||+|||++++|..+ ++.+|+++++++++.+.++++ ..+++++++ ++||
T Consensus 19 ~~~~kevv~r~~e~~~~gd~~~~l~~lya~D~v~~dp~~~~~~~~~G~eai~~~~~~~~~~~~-~~~~~i~~~~v~gd-- 95 (136)
T 3hk4_A 19 GMTIAEIAKDFTELLKQGDNAGAAEKYNADDIASYEAMEGPMAVSHGKEALRQKSQWWQENHE-VHGGSVEGPYVNGD-- 95 (136)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHEEEEEEEECSSCSTTSEEESHHHHHHHHHHHHHTEE-EEEEEEEEEEEETT--
T ss_pred cccHHHHHHHHHHHHHcCCcHHHHHHHCCCCEEEEcCCCCCccccCCHHHHHHHHHHHHhcCC-eeeeeecceEEcCC--
Confidence 47899999999999999997 6789999999999997532 147999999999998888876 667899874 5676
Q ss_pred eEEEEEEEEeCC
Q 030319 159 ANGKESHFLSAK 170 (179)
Q Consensus 159 aV~v~w~lew~~ 170 (179)
.+.++|+++..+
T Consensus 96 ~v~v~~~~~gth 107 (136)
T 3hk4_A 96 QFALRFKFDVTP 107 (136)
T ss_dssp EEEEEEEEEEEE
T ss_pred EEEEEEEEEEEE
Confidence 677777776543
No 30
>3dxo_A Uncharacterized snoal-like protein; putative isomerase of the snoal-like family; HET: MSE PGE; 2.70A {Agrobacterium tumefaciens str} SCOP: d.17.4.19
Probab=99.32 E-value=8.1e-12 Score=92.78 Aligned_cols=81 Identities=14% Similarity=0.188 Sum_probs=69.2
Q ss_pred cHHHHHHHHHHHHhCCCHH----HHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEE-eeecCCCce
Q 030319 85 GGAVVVRRFYAGINGRDLA----SVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVID-DISAEDSSA 159 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~d----al~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~-ev~egD~~a 159 (179)
..++++++|+++||+.|.+ ++.++|+||++|+||+. +++|++++.+|+..++++++ ++++++. ++.. .+..
T Consensus 4 ~~~~~v~ry~~aw~~~d~~~~~~~l~~l~a~D~~~~dP~~--~~~G~~ai~~~~~~~~~~~~-~~~f~~~~~~~~-~~~~ 79 (121)
T 3dxo_A 4 QHLTIAQTYLAAWNEEDNERRRHLVGQAWAENTRYVDPLM--QGEGQQGIAAMIEAARQKFP-GYRFVLAGTPDG-HGNF 79 (121)
T ss_dssp HHHHHHHHHHHHHHCSCHHHHHHHHHHHEEEEEEEECSSC--EEEHHHHHHHHHHHHHHHST-TCEEEEEEEEEE-ETTE
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHhcCCCeEEECCCC--CcCCHHHHHHHHHHHHHHCC-CcEEEEccCcce-eCCE
Confidence 3678999999999999985 79999999999999875 49999999999999999997 8999998 5432 2347
Q ss_pred EEEEEEEEeC
Q 030319 160 NGKESHFLSA 169 (179)
Q Consensus 160 V~v~w~lew~ 169 (179)
+.++|++..+
T Consensus 80 ~~~~w~~~~~ 89 (121)
T 3dxo_A 80 TRFSWRLISP 89 (121)
T ss_dssp EEEEEEEECT
T ss_pred EEEEEEEeCC
Confidence 8899998754
No 31
>3i0y_A Putative polyketide cyclase; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG, protein structure initiative; HET: MSE UNL; 1.50A {Xanthomonas campestris PV}
Probab=99.31 E-value=4.3e-12 Score=93.93 Aligned_cols=82 Identities=18% Similarity=0.252 Sum_probs=61.7
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEee-ecCCCceEEE
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDI-SAEDSSANGK 162 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev-~egD~~aV~v 162 (179)
+.++++|++||++||++|++++.+||+||++|+.|. +.+++|++++++|++.+...++..++..+..+ .+|| .|.+
T Consensus 8 m~~~~~v~~~~~a~~~~D~~~~~~l~a~D~~~~~p~-~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd--~v~~ 84 (140)
T 3i0y_A 8 QRATGLVQAYYEAFNRGDWDAMLAFLAEDVAHDLNQ-GPREIGRAAFASFLQRMNDSYREQLRDIVVTANDEGT--RVGA 84 (140)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHTEEEEEEEECTT-SCEEESHHHHHHHHHHHHHHEEEEEEEEEEEECTTSS--EEEE
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHcCCcEEEEcCC-CCceEcHHHHHHHHHHHhhhcchhhhheeeeecccCC--EEEE
Confidence 568899999999999999999999999999998654 45799999999999999877642211111112 2344 6666
Q ss_pred EEEEEe
Q 030319 163 ESHFLS 168 (179)
Q Consensus 163 ~w~lew 168 (179)
+|+++.
T Consensus 85 ~~~~~g 90 (140)
T 3i0y_A 85 EYVVHG 90 (140)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 666643
No 32
>1s5a_A Hypothetical protein YESE; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Bacillus subtilis} SCOP: d.17.4.10
Probab=99.29 E-value=5.4e-12 Score=94.19 Aligned_cols=82 Identities=21% Similarity=0.246 Sum_probs=65.7
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCC----CCCCccCHHHHHHHHHHHHHhcCCCeEE--EEEee-ecCC
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLI----FPRPFLGRKATLDFFKKFSDSISSDLQF--VIDDI-SAED 156 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~----~~~Pi~Greav~~ff~~~~~afp~dl~~--~I~ev-~egD 156 (179)
+.++++|++||++||++|++++.+||+||++|++|. .+.+++|+++++++++.+.+.++ ++++ .+..+ .+||
T Consensus 10 m~~~~~v~~~~~a~~~~D~~~l~~l~a~D~~~~~p~~~~g~~~~~~G~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~gd 88 (150)
T 1s5a_A 10 EKACETLRKFMAYMLEKDMKSWTELWDENAVFEFPYAPEGSPKRIEGKAAIYDYIKDYPKQIH-LSSFTAPTVYRSADSN 88 (150)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTCCTTSCSEEESHHHHHHHHTTHHHHEE-EEEECCCEEEEBSSSS
T ss_pred cCHHHHHHHHHHHHhcCCHHHHHHhCCCCEEEEeecCCCCCCccccCHHHHHHHHHHhhhcCC-cccceeEEEEEecCCC
Confidence 368899999999999999999999999999999862 23358999999999999999886 5666 33333 3454
Q ss_pred CceEEEEEEEEe
Q 030319 157 SSANGKESHFLS 168 (179)
Q Consensus 157 ~~aV~v~w~lew 168 (179)
.+.++|+++.
T Consensus 89 --~v~~~~~~~~ 98 (150)
T 1s5a_A 89 --TVIAEFQCDG 98 (150)
T ss_dssp --EEEEEEEEEE
T ss_pred --EEEEEEEEEE
Confidence 6677777764
No 33
>3dmc_A NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, unknow function; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.17.4.10
Probab=99.29 E-value=5.2e-12 Score=95.67 Aligned_cols=87 Identities=14% Similarity=0.162 Sum_probs=69.2
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCC--CCCccCHHHHHHHHHHHHHhcCCCeEEE-EEeee-cCCCce
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIF--PRPFLGRKATLDFFKKFSDSISSDLQFV-IDDIS-AEDSSA 159 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~--~~Pi~Greav~~ff~~~~~afp~dl~~~-I~ev~-egD~~a 159 (179)
...++++++|++|+++||++++.+||+||++|+.|+- +++++|++++++|++.+...++..++++ ++.+. +|+.+.
T Consensus 12 ~~~~~~~~~f~~A~~~gD~~~l~~lla~D~v~~~pg~~~~g~~~G~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~G~~vv 91 (134)
T 3dmc_A 12 KVAHQGFEFFTQGLATGEWQKFLDMLTEDFTFWFPMGEFHGLNVGKERAKEFFTYVSESFHTGIQISSLDRVTSNETTVV 91 (134)
T ss_dssp HHHHHHHHHHHHHHHHSCCHHHHTTEEEEEEEEESSGGGBEEEESHHHHHHHHHHHHHTCTTCEEEEEEEEEEECSSEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHcCCCEEEEecCCCCCccchhHHHHHHHHHHHHHhhcCCceeEEEEEEEecCCEEE
Confidence 5667788889999999999999999999999997653 2568999999999999998887568888 88754 566334
Q ss_pred EEEEEEEEeCC
Q 030319 160 NGKESHFLSAK 170 (179)
Q Consensus 160 V~v~w~lew~~ 170 (179)
+..+.+++..+
T Consensus 92 ve~~~~g~~~g 102 (134)
T 3dmc_A 92 FEFRDEGLFLG 102 (134)
T ss_dssp EEEEEEEEETT
T ss_pred EEEEEEEEEcC
Confidence 44445566665
No 34
>3f8h_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 2.00A {Silicibacter SP}
Probab=99.27 E-value=3.9e-12 Score=97.75 Aligned_cols=83 Identities=12% Similarity=0.139 Sum_probs=63.3
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeeecCCCceEEEE
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSANGKE 163 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~egD~~aV~v~ 163 (179)
..++++|++||++||++|++++.++|+||++++ ++.+++++|++++++|++.+..+|+ +....+..+...++..|.++
T Consensus 18 ~~~~~~v~~~~~a~n~~D~~~l~~l~a~D~v~~-~~~~~~~~G~e~i~~~~~~~~~~~~-~~~~~~~~~~~~~gd~v~~~ 95 (150)
T 3f8h_A 18 QGMNDTIARYFDAFNAGDTDGMLACLSEDVAHH-VNEGNIRVGKEKFAAFCAHMSHCYK-EELTDMVIFATPDATRAAAE 95 (150)
T ss_dssp ECCCCHHHHHHHHHHHTCHHHHHTTEEEEEEEE-EETTEEEESHHHHHHHHHHHHHHEE-EEEEEEEEEECTTSSEEEEE
T ss_pred hhHHHHHHHHHHHHHccCHHHHHHHcCCCeEEe-CCCCcceeCHHHHHHHHHHHHHhCC-ccccceEEEEecCCCEEEEE
Confidence 457889999999999999999999999999954 5555578999999999999999997 33333333321223466667
Q ss_pred EEEEe
Q 030319 164 SHFLS 168 (179)
Q Consensus 164 w~lew 168 (179)
|+++-
T Consensus 96 ~~~~g 100 (150)
T 3f8h_A 96 YTVNG 100 (150)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76653
No 35
>2bng_A MB2760; epoxide hydrolase, limonene, hydrolase, structural proteomics in europe, spine, structural genomics; 2.5A {Mycobacterium tuberculosis} SCOP: d.17.4.8
Probab=99.26 E-value=1.2e-11 Score=93.49 Aligned_cols=77 Identities=21% Similarity=0.372 Sum_probs=63.7
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCCCceEEE
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSSANGK 162 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD~~aV~v 162 (179)
..++++|++||++||++|++++.+||+||++|++++.+ +++|++++++|++.+...+ +.++++.++. +|| .+.+
T Consensus 15 ~~~~~~v~~f~~a~~~gD~~~l~~l~a~D~v~~~~~~~-~~~G~~~i~~~~~~~~~~~--~~~~~i~~~~~~g~--~vv~ 89 (149)
T 2bng_A 15 TEAIRAVEAFLNALQNEDFDTVDAALGDDLVYENVGFS-RIRGGRRTATLLRRMQGRV--GFEVKIHRIGADGA--AVLT 89 (149)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEETTTE-EEECHHHHHHHHHTTTTTC--EEEEEEEEEEEETT--EEEE
T ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHcCCCEEEEeCCCC-CccCHHHHHHHHHHHHhhc--CcEEEEEEEEEeCC--EEEE
Confidence 46789999999999999999999999999999976654 6899999999999987766 5788888864 565 3444
Q ss_pred EEE
Q 030319 163 ESH 165 (179)
Q Consensus 163 ~w~ 165 (179)
.|.
T Consensus 90 ~~~ 92 (149)
T 2bng_A 90 ERT 92 (149)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 36
>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27
Probab=99.24 E-value=3.4e-11 Score=87.91 Aligned_cols=79 Identities=15% Similarity=0.196 Sum_probs=63.5
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee--cCCCceEE
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS--AEDSSANG 161 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~--egD~~aV~ 161 (179)
...++++.+|+++||++|++++.+||+||++++.++.+ +++|+++++++|+.++..++.+++++++++. .|| .+.
T Consensus 11 ~~i~~~~~~~~~a~~~~D~~~~~~l~a~D~v~~~~~~~-~~~G~~ai~~~~~~~~~~~~~~~~~~~~~i~~~~gd--~a~ 87 (135)
T 3d9r_A 11 AVIEAAAIAYLTAFNRADIPAVIATYTDDGVLMGPGRP-AAVGKDELAEVYLSVFETVGFDMAYEIKEVVQTSAD--WAF 87 (135)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEECTTSC-CEESHHHHHHHHHHHHHHEEEEEEEEEEEEEEEETT--EEE
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHhcCCCEEEECCCCC-cccCHHHHHHHHHHHHhhcCCceeEEEEEEEEecCC--EEE
Confidence 34678999999999999999999999999999976544 6789999999999998776546788888863 465 333
Q ss_pred EEEE
Q 030319 162 KESH 165 (179)
Q Consensus 162 v~w~ 165 (179)
++|+
T Consensus 88 ~~~~ 91 (135)
T 3d9r_A 88 VRSA 91 (135)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 37
>1tuh_A BAL32A, hypothetical protein EGC068; unknown function; 1.85A {Uncultured bacterium} SCOP: d.17.4.11
Probab=99.24 E-value=5e-11 Score=90.74 Aligned_cols=79 Identities=20% Similarity=0.282 Sum_probs=62.7
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCC---CCccCHHHHHHHHHHHHHhcCC-CeEEEEEeee-cCCCce
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFP---RPFLGRKATLDFFKKFSDSISS-DLQFVIDDIS-AEDSSA 159 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~---~Pi~Greav~~ff~~~~~afp~-dl~~~I~ev~-egD~~a 159 (179)
.++++|++||++||++|++++.+||+||++|++|+.+ ++++|++++++|++.+. +++. ++++++.++. +|| ..
T Consensus 30 ~~~~~v~~~~~a~~~gD~~~l~~l~a~D~~~~~~~~~~~~g~~~G~~~i~~~~~~~~-~~~~~~~~~~i~~~~~~gd-~~ 107 (156)
T 1tuh_A 30 QNAETVRRGYAAFNSGDMKTLTELFDENASWHTPGRSRIAGDHKGREAIFAQFGRYG-GETGGTFKAVLLHVLKSDD-GR 107 (156)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEECSSSTTCEEEESHHHHHHHHHHHH-HTTTTCCEEEEEEEEECTT-SC
T ss_pred hHHHHHHHHHHHHhCCCHHHHHHhcCCCEEEEccCCCCccceEcCHHHHHHHHHHHH-hhcCCceEEEEEEEEEcCC-CE
Confidence 5789999999999999999999999999999987643 23699999999999964 5543 6899998864 555 13
Q ss_pred EEEEEE
Q 030319 160 NGKESH 165 (179)
Q Consensus 160 V~v~w~ 165 (179)
+.+.|+
T Consensus 108 v~~~~~ 113 (156)
T 1tuh_A 108 VIGIHR 113 (156)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 444444
No 38
>3f7x_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}
Probab=99.23 E-value=2.9e-11 Score=92.85 Aligned_cols=83 Identities=14% Similarity=0.197 Sum_probs=62.2
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEee-ecCCCceEEE
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDI-SAEDSSANGK 162 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev-~egD~~aV~v 162 (179)
...+++|++||++||++|++++.+||+||++|+.| .++++.|++++++|++.+..++...++..+..+ .+|| .|.+
T Consensus 20 ~~~~~lv~~~~~a~~~~D~~~l~~l~a~D~v~~~p-~g~~~~G~e~i~~~~~~~~~~~~~~~~~~~~~~~~~gd--~v~~ 96 (151)
T 3f7x_A 20 MTATELVNAYYAAFNAGDMPAFLALLSEDVIHDIN-QGERQMGKARFAAFMEKMNRCYRERLADIVVMQNADGS--RAAA 96 (151)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHTEEEEEEEECT-TSCEEESHHHHHHHHHHHHHHEEEEEEEEEEEECTTSS--EEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhcCCCEEEECC-CCCCcCCHHHHHHHHHHHHHhhccceeEEEEEEecCCC--EEEE
Confidence 45789999999999999999999999999999753 446799999999999999887632222222121 3454 6666
Q ss_pred EEEEEeC
Q 030319 163 ESHFLSA 169 (179)
Q Consensus 163 ~w~lew~ 169 (179)
+|+++..
T Consensus 97 ~~~~~gt 103 (151)
T 3f7x_A 97 EFTVHGQ 103 (151)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 6666643
No 39
>3flj_A Uncharacterized protein conserved in bacteria WIT cystatin-like fold; YP_168589.1; HET: MSE; 2.00A {Silicibacter pomeroyi dss-3}
Probab=99.22 E-value=3.7e-11 Score=95.15 Aligned_cols=83 Identities=12% Similarity=0.184 Sum_probs=68.8
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeeecCCCceEEEE
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSANGKE 163 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~egD~~aV~v~ 163 (179)
..+.+++++|+++|++||++++.+||+|||++++|...+|++|++++++||......++ ++++..+ ...|+ .+.+.
T Consensus 18 ~~~~~~v~~f~~A~~~gD~~aL~~LlA~Dvv~~sP~~~~p~~Gr~av~~~l~~~~~~~~-df~~~~~-~v~G~--~avl~ 93 (155)
T 3flj_A 18 QGMHPTIARMQEVVAKGDESLIHALLAEDVRFMPPTYYKTWTGRDPVAAVLGHVGQVFS-EFRYRRI-MGEGK--DWALE 93 (155)
T ss_dssp TTCCHHHHHHHHHHTTTCHHHHHTTEEEEEEEECSSSSCCEESHHHHHHHHHHHHHHEE-EEEEEEE-EEETT--EEEEE
T ss_pred hhHHHHHHHHHHHHHhCCHHHHHHhcCCCEEEECCCCCCCcCCHHHHHHHHHHHHhhCC-CcEEEEE-EEcCC--EEEEE
Confidence 45778999999999999999999999999999999888899999999999999999886 6655533 34555 56667
Q ss_pred EEEEeCC
Q 030319 164 SHFLSAK 170 (179)
Q Consensus 164 w~lew~~ 170 (179)
|+++..+
T Consensus 94 f~~~~~g 100 (155)
T 3flj_A 94 FQCKVGE 100 (155)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 7765554
No 40
>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}
Probab=99.21 E-value=6.1e-11 Score=100.66 Aligned_cols=83 Identities=13% Similarity=0.017 Sum_probs=69.2
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCCCceEEE
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSSANGK 162 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD~~aV~v 162 (179)
...++++++|+++||++|++++.+||+||+++++|..++|++|++++++||+.++++ . . ++.+.++. ..++..+.+
T Consensus 138 ~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~v~~~P~~~~~~~G~~ai~~~~~~~~~~-~-~-~~~~~~~~~~~~g~~aa~ 214 (283)
T 3rga_A 138 ERRKELAREHCLRINDGDVDGLLKLYSPRIRFEDPVGSWTRTGLEALRAHATMAVGS-N-V-RETAGLTVAGQDGRHAAV 214 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEESSTTSCEEESHHHHHHHHHHHHHT-T-C-EEEEEEEEECTTSSEEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhcCCCeEEECCCCCCcccCHHHHHHHHHHhhcc-C-c-EEEEeeEEecCCCCEEEE
Confidence 467889999999999999999999999999999987777899999999999999987 3 3 66666643 233457888
Q ss_pred EEEEEeC
Q 030319 163 ESHFLSA 169 (179)
Q Consensus 163 ~w~lew~ 169 (179)
+|+++..
T Consensus 215 ~~~~~~~ 221 (283)
T 3rga_A 215 TVSATMD 221 (283)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 8888864
No 41
>3en8_A Uncharacterized NTF-2 like protein; YP_553245.1, NTF-2 like protein of unknown function, structu genomics; HET: MSE PG4; 1.85A {Burkholderia xenovorans LB400} SCOP: d.17.4.20
Probab=99.20 E-value=4.1e-11 Score=90.08 Aligned_cols=80 Identities=11% Similarity=0.086 Sum_probs=64.5
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCC-eEEEEEeee-cCCCceEEE
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSD-LQFVIDDIS-AEDSSANGK 162 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~d-l~~~I~ev~-egD~~aV~v 162 (179)
.++++|++||++||++|++++.+||+||++++.|+.+.+++|++++++|++.+ +.. ..++++.+. +|+ .+.+
T Consensus 6 ~~~~~v~~~~~a~~~~D~~~l~~llaeD~v~~~P~~~~~~~Gr~~~~~~~~~~----~~~~~~~~i~~~~a~G~--~vv~ 79 (128)
T 3en8_A 6 KIREALNAHWQASAAGDFDAEHDIYDDDAICDYPQSGERILGRMNLQALRSHH----PGKPAGFEVRRIQGEGN--LWIT 79 (128)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHTTTEEEEEEEEETTTTEEEESHHHHHHHHHHT----TCSCSEEEEEEEEEETT--EEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhcCCCEEEECCCCCCEEECHHHHHHHHHHC----CCCCcceEEEEEEECCC--EEEE
Confidence 47899999999999999999999999999999988777899999999887654 332 237888764 555 6667
Q ss_pred EEEEEeCC
Q 030319 163 ESHFLSAK 170 (179)
Q Consensus 163 ~w~lew~~ 170 (179)
.+++...+
T Consensus 80 ~~~~~~~g 87 (128)
T 3en8_A 80 EYSISYNG 87 (128)
T ss_dssp EEEEEETT
T ss_pred EEEEecCC
Confidence 77776544
No 42
>3er7_A Uncharacterized NTF2-like protein; YP_001812677.1, NTF2-like protein of unknown function, struc genomics; HET: MSE; 1.50A {Exiguobacterium sibiricum 255-15} SCOP: d.17.4.24
Probab=99.19 E-value=1.5e-11 Score=94.43 Aligned_cols=81 Identities=11% Similarity=0.124 Sum_probs=60.0
Q ss_pred CcHHHHHHHHHHHHh-----CCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEee--ecCC
Q 030319 84 GGGAVVVRRFYAGIN-----GRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDI--SAED 156 (179)
Q Consensus 84 ~~~~~vVrrfyeA~N-----a~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev--~egD 156 (179)
+.|+++|++||++++ .+|++.+.+||+||+++ .++. .++.|++++++||+.++.+++ ++++.++.. .++
T Consensus 2 ~~n~~~v~ry~~~~d~~~~d~~d~~~l~~Lfa~Dav~-~~~~-~~~~G~~ai~~F~~~~~~a~~-~~~~~~~~~v~~~~- 77 (131)
T 3er7_A 2 MMNTTTLDRYFDLFDASRTDEKAFDDLISLFSDEITF-VLNG-QEQHGIDAWKQFVRMVFTANQ-DIKHMYAGWVPSET- 77 (131)
T ss_dssp ----CHHHHHHHHHHHTTTCHHHHHHHHHTEEEEEEE-EETT-EEEESHHHHHHHHHHHHHHEE-EEEEEECCCEECSS-
T ss_pred CcHHHHHHHHHHHHhhccCCccCHHHHHHHhCCCeEe-cCCC-CCcCChHHHHHHHHHHHhhCc-CceEEEEEEEEecC-
Confidence 458899999999986 35699999999999999 3333 368999999999999999997 788777663 333
Q ss_pred CceEEEEEEEEe
Q 030319 157 SSANGKESHFLS 168 (179)
Q Consensus 157 ~~aV~v~w~lew 168 (179)
+..+.++|++.-
T Consensus 78 gd~~~~~w~~~g 89 (131)
T 3er7_A 78 GDTMETRWAVCG 89 (131)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCEEEEEEEEEE
Confidence 235566666544
No 43
>1z1s_A Hypothetical protein PA3332; beta barrel, conserved hypothetical protein, structural genomics, PSI, protein structure initiative; HET: PGE; 1.49A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.10
Probab=99.19 E-value=1.7e-11 Score=94.69 Aligned_cols=83 Identities=14% Similarity=0.122 Sum_probs=63.0
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCC----CCCCccCHHHHHHHHHHHHHhcCCCeEEE-EEeeecCCCc
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLI----FPRPFLGRKATLDFFKKFSDSISSDLQFV-IDDISAEDSS 158 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~----~~~Pi~Greav~~ff~~~~~afp~dl~~~-I~ev~egD~~ 158 (179)
..++++|++||++|+++|++++.+||+||++|++|. ++..++|++++++|++.+...++ +. +. +......++.
T Consensus 23 ~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~v~~~P~~~~g~~~~~~G~~ai~~~~~~~~~~~~-~~-~~~~~~~~~~~g~ 100 (163)
T 1z1s_A 23 MNAKEILVHSLRLLENGDARGWCDLFHPEGVLEFPYAPPGWKTRFEGRETIWAHMRLFPEHLT-VR-FTDVQFYETADPD 100 (163)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEECSSCCTTSCCEEESHHHHHHTTTTGGGTEE-EE-ECCCEEECCSSTT
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECcCCCCCCCcccCCHHHHHHHHHHHHHhCc-cc-eeeeEEEEEeCCC
Confidence 468999999999999999999999999999999863 23347999999999999988876 43 21 1111113334
Q ss_pred eEEEEEEEEe
Q 030319 159 ANGKESHFLS 168 (179)
Q Consensus 159 aV~v~w~lew 168 (179)
.+.++|+++.
T Consensus 101 ~vv~~~~~~g 110 (163)
T 1z1s_A 101 LAIGEFHGDG 110 (163)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEE
Confidence 6777777764
No 44
>3f8x_A Putative delta-5-3-ketosteroid isomerase; structural genomics, joint center for structural genomics; HET: MSE; 1.55A {Pectobacterium atrosepticum SCRI1043}
Probab=99.16 E-value=6.4e-11 Score=92.35 Aligned_cols=81 Identities=12% Similarity=0.139 Sum_probs=65.9
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEee-ecCCCceEEEE
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDI-SAEDSSANGKE 163 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev-~egD~~aV~v~ 163 (179)
...+++++|+++++++|++++.+||+||+++++|..+.|++|++++++||..++..++ ++ .+... ..|+.. .+.
T Consensus 21 ~~~~~l~~f~~a~~~gD~~aL~~LlA~Dvv~~~P~~~~~~~G~~av~~~~~~~~~~~~-~f--~~~~~~~~g~~~--~l~ 95 (148)
T 3f8x_A 21 AVQSGLQEWHRIIAEADWERLPDLLAEDVVFSNPSTFDPYHGKGPLMVILPAVFSVLE-NF--QYARHFSSKSGY--VLE 95 (148)
T ss_dssp HHHHHHHHHHHHHHHTCGGGSGGGEEEEEEEECSSCSSCEESHHHHHHHHHHHHHHCE-EE--EEEEEEECSSEE--EEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHhCCCEEEECCCCCCCcCCHHHHHHHHHHHHhhCC-CE--EEEEEEEeCCeE--EEE
Confidence 4678999999999999999999999999999999888899999999999999999884 44 44443 345533 566
Q ss_pred EEEEeCC
Q 030319 164 SHFLSAK 170 (179)
Q Consensus 164 w~lew~~ 170 (179)
|+++.++
T Consensus 96 f~~~~~g 102 (148)
T 3f8x_A 96 FNANMGD 102 (148)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 6665544
No 45
>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}
Probab=99.15 E-value=2e-10 Score=82.97 Aligned_cols=83 Identities=17% Similarity=0.108 Sum_probs=63.5
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCCCceEEEE
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSSANGKE 163 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD~~aV~v~ 163 (179)
...+++.+|+++||++|++++.+||+||+++.+|+ +.+++|+++++++|+.++..-...+++...++. .||...+..+
T Consensus 7 ~I~~~~~~~~~a~~~~D~~~~~~l~a~Da~~~~~~-~~~~~G~~~i~~~~~~~~~~~~~~~~~~~~~v~~~gd~A~~~~~ 85 (129)
T 3hx8_A 7 AIEAANADFVKAYNSKDAAGVASKYMDDAAAFPPD-MARVDGRQNIQKLWQGAMDMGISELKLTTLDVQESGDFAFESGS 85 (129)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTT-SCCEESHHHHHHHHHHHHHTTCEEEEEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhCCCeEEeCCC-CCcccCHHHHHHHHHHHHhCCCceEEEEEEEEEcCCCEEEEEEE
Confidence 35789999999999999999999999999998653 446899999999999998742234566655554 5653344456
Q ss_pred EEEEe
Q 030319 164 SHFLS 168 (179)
Q Consensus 164 w~lew 168 (179)
|++..
T Consensus 86 ~~~~~ 90 (129)
T 3hx8_A 86 FSLKA 90 (129)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77765
No 46
>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}
Probab=99.14 E-value=9.3e-11 Score=99.51 Aligned_cols=80 Identities=15% Similarity=0.057 Sum_probs=66.0
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee---cCCCceEE
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS---AEDSSANG 161 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~---egD~~aV~ 161 (179)
.++++|++|++++|++|++++.+||+||+++++|..++|++|++++++||+.+++.+. ++++.++. +|+ .+.
T Consensus 7 ~~~~~v~~~~~~~~~~D~~~l~~l~a~Dav~~~P~~~~~~~Gr~ai~~~~~~~~~~~~---~~~~~~~~~~~~G~--~v~ 81 (283)
T 3rga_A 7 VRKEVALEYCRRVNAGELEGVLQLFAPDARLVDPLGTEPVVGRAALAARLAPALRGAV---HEEPGRPYAAHDGT--SVV 81 (283)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHTEEEEEEEECSSSSCCEESHHHHHHHHHHHHHTTC---EEEECCCBCCSSSS--EEE
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHhcCCCEEEECCCCCCCcCcHHHHHHHHHHHHhhcC---ceEEEEEEeeeeCC--EEE
Confidence 4788999999999999999999999999999998767789999999999999998873 56666643 444 566
Q ss_pred EEEEEEeC
Q 030319 162 KESHFLSA 169 (179)
Q Consensus 162 v~w~lew~ 169 (179)
++|+++..
T Consensus 82 ~~~~~~~~ 89 (283)
T 3rga_A 82 LPATVTVG 89 (283)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEE
Confidence 66655543
No 47
>3f40_A Uncharacterized NTF2-like protein; YP_677363.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.27A {Cytophaga hutchinsonii atcc 33406}
Probab=99.12 E-value=3e-10 Score=83.98 Aligned_cols=78 Identities=8% Similarity=0.122 Sum_probs=62.5
Q ss_pred CCcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEee-ecCCCceEE
Q 030319 83 DGGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDI-SAEDSSANG 161 (179)
Q Consensus 83 ~~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev-~egD~~aV~ 161 (179)
...++++|++||+|||+||++++.+|++||++|+.|. ++++|++++.+|+..+.. +++++.+ .+|+ .+.
T Consensus 5 ~~~~~~~v~~f~~A~~~gD~~~l~~lla~Dvv~~~~~--g~~~G~~~v~~~~~~~~~------~~~~~~~~~~G~--~v~ 74 (114)
T 3f40_A 5 QITTRDLVLEFIHALNTENFPAAKKRLNENFTFNGPM--GHREGSERYMNDMEKMKF------KYVVHKMFEEGN--DVC 74 (114)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEEETT--EEEESHHHHHHHHHHHCC------EEEEEEEEEETT--EEE
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHhcCCCeEEECCC--CcccCHHHHHHHHHHHHh------heEEEEEEecCC--cEE
Confidence 3678999999999999999999999999999999753 368999999999987653 6777775 4555 555
Q ss_pred EEEEEEeCC
Q 030319 162 KESHFLSAK 170 (179)
Q Consensus 162 v~w~lew~~ 170 (179)
+.|+....+
T Consensus 75 ~~~~~~~~g 83 (114)
T 3f40_A 75 LIYDINMNG 83 (114)
T ss_dssp EEEEEEETT
T ss_pred EEEEEecCC
Confidence 667665544
No 48
>3lyg_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE GOL; 1.61A {Colwellia psychrerythraea}
Probab=98.98 E-value=3.4e-09 Score=80.50 Aligned_cols=73 Identities=10% Similarity=0.081 Sum_probs=65.5
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeeecCC
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAED 156 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~egD 156 (179)
|...++|++.+++++++|+|.+.++|+||.+++.|.-.+-++||+++++-|..+.+.+|++..++.-.+++|+
T Consensus 2 M~~~~iVqrlW~al~AgD~D~l~adyaeDaV~i~P~sa~vl~GR~~~r~a~~~L~~~lP~g~~It~lR~i~gg 74 (120)
T 3lyg_A 2 MNLANIVQRGWEALGAGDFDTLVTDYVEKMIFIMPGQADVLKGRQAFRSALDNLGEILPPGFEITGLRQLEGE 74 (120)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHGGGEEEEEEEECSSTTCEEESHHHHHHHHTTHHHHSCTTCEEEEEEEEECS
T ss_pred CCHHHHHHHHHHHHhcCCHHHHHHhcccCeEEEccCccceeecHHHHHHHHHHHHhhCCCCceeeeEEEecCC
Confidence 5678899999999999999999999999999998877778999999999999999999999888877765543
No 49
>3f7s_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Pseudomonas putida KT2440}
Probab=98.96 E-value=5.8e-09 Score=77.75 Aligned_cols=67 Identities=19% Similarity=0.287 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEee
Q 030319 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDI 152 (179)
Q Consensus 86 ~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev 152 (179)
..+++.+|++||+++|++++.++|+||+++.+++.+..+.|+++++++|+.++..++..+++++.++
T Consensus 10 I~~l~~~~~~A~~~~D~~~~~~l~a~D~v~~~~~~~~~~~G~~air~~~~~~~~~~~~~~~~~~~~~ 76 (142)
T 3f7s_A 10 IRQLIERWMQAVRDRDIPGIIAPYADDIVAFDAIQALQFKGKSAYTAHWEMCMGMCTGPMVFELAQL 76 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECSSSSSCEESHHHHHHHHHHHHHTCCSCEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCCCEEEecCCCCccccCHHHHHHHHHHHHHhCCCceEEEEeee
Confidence 5678899999999999999999999999998765554568999999999999988876788888874
No 50
>2gxf_A Hypothetical protein YYBH; alpha-beta protein., structural genomics, PSI, protein structure initiative; HET: MES; 3.10A {Bacillus subtilis} SCOP: d.17.4.22
Probab=98.96 E-value=6.1e-10 Score=83.61 Aligned_cols=82 Identities=11% Similarity=0.032 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEE--Eee-ecCCCceEEE
Q 030319 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVI--DDI-SAEDSSANGK 162 (179)
Q Consensus 86 ~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I--~ev-~egD~~aV~v 162 (179)
..+++.+|++|||++|++++.+||+||+++...+ +.+++|+++|+++|+.++..++...++++ ..+ ..||...+..
T Consensus 5 I~~l~~~~~~A~~~~D~d~~~~lfa~Dav~~~~~-g~~~~G~~aI~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~A~~~~ 83 (142)
T 2gxf_A 5 LKDIISACDLAIQNEDFDTLMNYYSEDAVLVVKP-GMIARGKEEIKKAFITIANYFNHHIVPTQGKMILLEAGDTVLVLS 83 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHTTSEEEEEEEECSS-SCEEEHHHHHHHHHHHTTSCCCSSCCCEEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhcCCCEEEEcCC-CCcccCHHHHHHHHHHHHHhhCCCceEEEEEEEEEEcCCEEEEEE
Confidence 5689999999999999999999999999995444 55799999999999998875543334433 333 3565334455
Q ss_pred EEEEEe
Q 030319 163 ESHFLS 168 (179)
Q Consensus 163 ~w~lew 168 (179)
.|++..
T Consensus 84 ~~~~~~ 89 (142)
T 2gxf_A 84 QTLLDS 89 (142)
T ss_dssp EEECCC
T ss_pred EEEEEE
Confidence 666543
No 51
>3gwr_A Putative calcium/calmodulin-dependent protein KIN II association domain; YP_315894.1; HET: MSE PG4; 2.01A {Thiobacillus denitrificans atcc 25259}
Probab=98.94 E-value=1.1e-08 Score=78.65 Aligned_cols=85 Identities=14% Similarity=0.185 Sum_probs=66.6
Q ss_pred CCcHHHHHHHHHHHHhCCCHHHHHhhhccC--ceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEee--e-cCCC
Q 030319 83 DGGGAVVVRRFYAGINGRDLASVEELIADD--CVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDI--S-AEDS 157 (179)
Q Consensus 83 ~~~~~~vVrrfyeA~Na~D~dal~eLfApD--~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev--~-egD~ 157 (179)
-..++++..+||+|||++|++++.++|++| +++.+|+.+ +++|++++++.|+.++...+ .+++++.++ . .||.
T Consensus 7 ~~~~~~~~~af~~A~~~gD~da~~al~a~d~~v~~v~p~g~-~l~G~~ai~~~w~~~f~~~~-~~~i~~~~v~v~~~gd~ 84 (144)
T 3gwr_A 7 FPTPEAAEDAFYAAFEARSLDDMMAVWARDDHVACIHPLAA-PLNGRAAVAAGWRSMFGAAG-RFRLQVKAVHEIRQADH 84 (144)
T ss_dssp CSSHHHHHHHHHHHHHHTCHHHHHHHBCSSSCCEEECTTCC-CEESHHHHHHHHHHHHHHHC-CEEEEEEEEEEEECSSE
T ss_pred cCCHHHHHHHHHHHHHcCCHHHHHhhccCCCCEEEECCCCC-CcccHHHHHHHHHHHHcCCC-cEEEEEEEEEEEecCCE
Confidence 356999999999999999999999999999 666666544 69999999999999998764 578887774 2 3443
Q ss_pred ceEEEEEEEEeC
Q 030319 158 SANGKESHFLSA 169 (179)
Q Consensus 158 ~aV~v~w~lew~ 169 (179)
--+..++++...
T Consensus 85 A~v~~~e~~~~~ 96 (144)
T 3gwr_A 85 VIRIVDEFLTIG 96 (144)
T ss_dssp EEEEEEEEEEET
T ss_pred EEEEEEEEEEec
Confidence 334446677664
No 52
>3h51_A Putative calcium/calmodulin dependent protein KIN association domain; NP_636218.1; HET: MSE PG4; 1.70A {Xanthomonas campestris PV}
Probab=98.89 E-value=1.3e-08 Score=77.58 Aligned_cols=84 Identities=15% Similarity=0.147 Sum_probs=63.8
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee--cCCCceEE
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS--AEDSSANG 161 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~--egD~~aV~ 161 (179)
....+++.+|+++||++|++++.+||+||+++.++..+.++.|+++++++|+.++...+ ...+.++++. .||.-.+.
T Consensus 20 ~~I~~~~~~~~~A~~~~D~~~l~~l~a~Dav~~~~~~~~~~~G~~~i~~~~~~~~~~~~-~~~i~~~~i~~~~gd~A~~~ 98 (156)
T 3h51_A 20 REVAALFDTWNAALATGNPHKVADLYAPDGVLLPTVSNEVRASREQIENYFEMFLTKKP-KGVINYRTVRLLDDDSAVDA 98 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEECSSCSSCBCSHHHHHHHHHHHGGGCC-EEEEEEEEEEECSSSEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCCCEEEecCCCCccccCHHHHHHHHHHHHhhCC-CCcccceEEEEecCCeEEEE
Confidence 55778899999999999999999999999999864445568999999999999998775 3455555542 35422333
Q ss_pred EEEEEEe
Q 030319 162 KESHFLS 168 (179)
Q Consensus 162 v~w~lew 168 (179)
.+|+++.
T Consensus 99 ~~~~~~~ 105 (156)
T 3h51_A 99 GVYTFTL 105 (156)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 4566665
No 53
>3jum_A Phenazine biosynthesis protein A/B; chirality, drug design, medicinal CH inhibitor, biosynthetic protein; HET: AOD; 1.45A {Burkholderia SP} PDB: 3b4o_A* 3b4p_A* 3dzl_A* 3ex9_A 3cnm_A* 3jun_A* 3juo_A* 3jup_A* 3juq_A*
Probab=98.85 E-value=3.7e-09 Score=85.93 Aligned_cols=82 Identities=13% Similarity=-0.037 Sum_probs=65.5
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeC----CCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCCCc
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDL----IFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSS 158 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp----~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD~~ 158 (179)
..++++|++|++++++ |.+.+.+|||||++|+.| +++..++||+++++||..+.+.|+ +.++....+. .+|..
T Consensus 41 ~~nr~vV~~yl~~~~~-D~~~~~eLfAeDav~e~P~~~~G~P~r~~GReai~~~~~~~~~~~~-d~~~~~~~v~~taDpd 118 (185)
T 3jum_A 41 QHNRKIVEQYMHTRGE-ARLKRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFP-DWVWTDIQIFETQDPN 118 (185)
T ss_dssp HHHHHHHHHHHHCCGG-GGGGGGGGEEEEEEEEESCCTTSSCEEEESHHHHHHHHHHHHHHST-TCEEEEEEEECCSSTT
T ss_pred HHHHHHHHHHHHHhcc-CHHHHHHhCCCCEEEEecCCCCCCCccccCHHHHHHHHHHHHhhCC-CCeeeEEEEEEecCCC
Confidence 5788999999999877 999999999999999974 234458999999999999999997 6787765542 34455
Q ss_pred eEEEEEEEE
Q 030319 159 ANGKESHFL 167 (179)
Q Consensus 159 aV~v~w~le 167 (179)
.|.+.|+++
T Consensus 119 ~VvvE~~~~ 127 (185)
T 3jum_A 119 WFWVECRGE 127 (185)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 666666654
No 54
>3rob_A Uncharacterized conserved protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.48A {Planctomyces limnophilus}
Probab=98.82 E-value=1.7e-08 Score=77.22 Aligned_cols=83 Identities=16% Similarity=0.160 Sum_probs=64.4
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEee-ecCCCceEEEE
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDI-SAEDSSANGKE 163 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev-~egD~~aV~v~ 163 (179)
.-.+++.+|++|+|++|++++.+||+||++|..++ +|..|+++++++|...+..++....++++++ ..||.--+...
T Consensus 18 aI~~l~~~~~~A~~~gD~~~l~al~a~D~v~~~~g--~~~~Gr~ai~a~~~~~~~~~~~~~~~~~~~i~v~GD~A~~~~~ 95 (139)
T 3rob_A 18 AIRTVQYRWLEATRKFDRQVLSSLMTDDVVFLTPG--RLPFGKEEFLAACEQNDQRVIIEASATFEEIVIVEPMAYTRTH 95 (139)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEECTT--SCCBCHHHHHHHHHHHHHHEEEEEEEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHccCcEEEECCC--CCccCHHHHHHHHHHHHHhcCCCCceEEEEEEEcCCeEEEEEE
Confidence 45678999999999999999999999999986433 3556999999999988877665677888886 46763344445
Q ss_pred EEEEeC
Q 030319 164 SHFLSA 169 (179)
Q Consensus 164 w~lew~ 169 (179)
|++...
T Consensus 96 ~~~~~t 101 (139)
T 3rob_A 96 LHIKVT 101 (139)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 665544
No 55
>3ff0_A Phenazine biosynthesis protein PHZB 2; cystatin-like fold, antibiotic biosynthesis, virulence, STRU genomics; 1.90A {Pseudomonas aeruginosa}
Probab=98.76 E-value=7e-09 Score=82.85 Aligned_cols=82 Identities=15% Similarity=0.112 Sum_probs=66.6
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCce---Ee-eCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCCCc
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCV---YE-DLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSS 158 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v---~~-dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD~~ 158 (179)
..|+++|++|++ +..+|.+.+.+||+||++ |+ +++++..++||+++++|+..+.+.|+ +.+|....+. .+|..
T Consensus 19 ~~Nr~vV~~~l~-~~~~D~~~~~~LfAeD~v~~~~e~~~G~P~~~~Gre~l~~~~~~~~~~~~-~~~~~~~~i~~t~Dpd 96 (163)
T 3ff0_A 19 RKNRETVVKYMN-TKGQDRLRRHELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFP-DWEWYNIKVFETDDPN 96 (163)
T ss_dssp HHHHHHHHHHHT-CCGGGGGGGGGGEEEEEEEEESSCSSSSCEEEESHHHHHHHHHHHHHHST-TCEEEEEEEEEBSSTT
T ss_pred HHHHHHHHHHHH-HhcCCHHHHHHhcCCcccceeeEECCCCCcceecHHHHHHHHHHHHhhCC-CceeeeEEEEEcCCCC
Confidence 688999999995 457899999999999999 98 34566668999999999999999997 6777755543 45566
Q ss_pred eEEEEEEEE
Q 030319 159 ANGKESHFL 167 (179)
Q Consensus 159 aV~v~w~le 167 (179)
.+.+.|+++
T Consensus 97 ~vvvE~~~~ 105 (163)
T 3ff0_A 97 HFWVECDGH 105 (163)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 777777764
No 56
>2ux0_A Calcium-calmodulin dependent protein kinase (CAM II gamma; transferase, oligomerisation DOM serine- threonine kinase, ATP-binding; 2.46A {Homo sapiens} SCOP: d.17.4.7 PDB: 2w2c_A 1hkx_A*
Probab=98.70 E-value=5.2e-08 Score=72.57 Aligned_cols=83 Identities=10% Similarity=0.053 Sum_probs=64.4
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCC-CCCCccCHHHHHHHHHHHHHhcCCCeEEEEEe--ee-cCCCceE
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLI-FPRPFLGRKATLDFFKKFSDSISSDLQFVIDD--IS-AEDSSAN 160 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~-~~~Pi~Greav~~ff~~~~~afp~dl~~~I~e--v~-egD~~aV 160 (179)
...++..+|++||+++|++++.++|+||+++-++. .+..+.|+++++++|+.++...+..+++++.+ +. .||..++
T Consensus 14 ~I~~l~~~~~~A~~~~D~~~~~~l~a~d~~~~~~~~~g~~~~G~~~~r~~~~~~~~~~~~~~~~~~~~~~v~~~gd~aav 93 (143)
T 2ux0_A 14 EIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNLVEGMDFHKFYFENLLSKNSKPIHTTILNPHVHVIGEDAAC 93 (143)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECGGGTTCEEEHHHHHHHHHHHTTTTCCSCEEEEEEEEEEEECSTTEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhcCCCcEEEeccCCCcEEEcHHHHHHHHHhhhhcCCCceeEEEeCCEEEEecCcEEE
Confidence 35678899999999999999999999999998653 23468899999999999987665567888877 33 4543454
Q ss_pred EEEEEEE
Q 030319 161 GKESHFL 167 (179)
Q Consensus 161 ~v~w~le 167 (179)
...|+++
T Consensus 94 ~~~~~~~ 100 (143)
T 2ux0_A 94 IAYIRLT 100 (143)
T ss_dssp EEEEEEE
T ss_pred EEEeEee
Confidence 5565555
No 57
>3cu3_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; 2.00A {Nostoc punctiforme} SCOP: d.17.4.28
Probab=98.65 E-value=1.2e-07 Score=73.26 Aligned_cols=56 Identities=13% Similarity=0.122 Sum_probs=49.6
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHh
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDS 140 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~a 140 (179)
....+++.+|+++||++|++.+.++|+||++|.+++ +.++.|+++|+++++..+..
T Consensus 16 ~aI~~~~~~~~~A~~~~D~d~~~~lfa~Da~~~~~~-g~~~~Gr~aI~~~~~~~~~~ 71 (172)
T 3cu3_A 16 SAIRAFHRQMIDAWNRGSGEGFAAPFSETADFITFE-GTHLKGRKEIAAFHQQAFDT 71 (172)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTT-CCEEEHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCCCeEEEeCC-CCeEECHHHHHHHHHHHhhc
Confidence 346788999999999999999999999999999753 35799999999999999876
No 58
>4i4k_A Uncharacterized protein SGCJ; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: CIT PG4 1PE; 1.70A {Streptomyces globisporus}
Probab=98.62 E-value=1.4e-07 Score=71.63 Aligned_cols=66 Identities=14% Similarity=-0.056 Sum_probs=53.3
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCe--EEEEEee
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDL--QFVIDDI 152 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl--~~~I~ev 152 (179)
...+++.+|++|||++|++++.+||+||+++..+ +.+++|+++|+++++..+..+..+. ++++.++
T Consensus 20 ~i~~l~~~y~~A~~~~D~d~~~~lf~~Da~~~~~--g~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~i 87 (143)
T 4i4k_A 20 AVAALPARIVAAWADHDADRFADVFAEDGTMILP--GLFRKGRENIRTHMAAAFAGPYKGTRVIGSPIDA 87 (143)
T ss_dssp HHHTHHHHHHHHHHTTCHHHHHTTEEEEEEEEET--TEEEESHHHHHHHHHHHHHTTTTTCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHhhcCceEEeC--CCeecCHHHHHHHHHHHHhhcCCCCeEEeeeEEE
Confidence 4567899999999999999999999999999843 3568999999999999987662233 4444444
No 59
>3gzr_A Uncharacterized protein with A NTF2-like fold; structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: MSE GOL; 1.40A {Caulobacter vibrioides}
Probab=98.60 E-value=1.2e-07 Score=72.56 Aligned_cols=81 Identities=12% Similarity=0.113 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCC--CeEEEEEeee--cCCCceEE
Q 030319 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISS--DLQFVIDDIS--AEDSSANG 161 (179)
Q Consensus 86 ~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~--dl~~~I~ev~--egD~~aV~ 161 (179)
-.+++.+|.+|||++|++++.+||+||++|.+.+ +.+++|+++|+++++..+..+.. .+++.+.++. .+|.-.+.
T Consensus 8 I~~l~~~~~~A~~~~D~d~~~~lf~~Da~~~~~~-G~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~A~v~ 86 (146)
T 3gzr_A 8 IQALIQAYFTAWNTNAPERFAEIFWPDGSWVNVV-GMHWRGRDQIVFAHTAFLKTIFKDCKQELVTIEARTIAPGSALAV 86 (146)
T ss_dssp HHHHHHHHHHHHHTTCGGGSGGGEEEEEEEECTT-CCEEESHHHHHHHHHHHHHTTTTTCCEEEEEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHhhccCCeEEEcCC-CCeeeCHHHHHHHHHHHhhcccCCCEEEEeEEEEEEcCCCEEEEE
Confidence 4678999999999999999999999999998543 35789999999999998875432 3455555653 45533333
Q ss_pred EEEEEE
Q 030319 162 KESHFL 167 (179)
Q Consensus 162 v~w~le 167 (179)
.+|++.
T Consensus 87 ~~~~l~ 92 (146)
T 3gzr_A 87 VTLIQD 92 (146)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 456553
No 60
>3bb9_A Putative orphan protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Shewanella frigidimarina} SCOP: d.17.4.16
Probab=98.45 E-value=8e-07 Score=66.97 Aligned_cols=65 Identities=12% Similarity=0.029 Sum_probs=54.3
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHH-HHHHHHHhcCCCeEEEEEe
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLD-FFKKFSDSISSDLQFVIDD 151 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~-ff~~~~~afp~dl~~~I~e 151 (179)
....+++.+|++||+++|++++.+||+||+++.+++ + +.+|++++++ .+...+..++ .+++++.+
T Consensus 30 ~~i~~~~~~~~~A~~~~D~~~l~~l~a~Da~~~~~~-g-~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~ 95 (148)
T 3bb9_A 30 SAAGNVVKQFHAALQMGNEAIVRQSLAANVQIYEGG-K-VERSLTEYANHHMLADMAYLK-GLTITPKE 95 (148)
T ss_dssp SHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEETT-E-EECSHHHHHHTHHHHHHHHHH-TEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHhhCCCeEEEeCC-C-ccCCHHHHHHHhHHHHHHhcc-CceEEeee
Confidence 467889999999999999999999999999987554 3 3889999999 8888776554 47777766
No 61
>1tp6_A Hypothetical protein PA1314; structural genomics, alpha-beta sandwich, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.12
Probab=98.41 E-value=4.7e-07 Score=68.10 Aligned_cols=72 Identities=15% Similarity=0.088 Sum_probs=55.8
Q ss_pred HHHHHHHHhC---C--CHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeeec---CCCceEE
Q 030319 90 VRRFYAGING---R--DLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISA---EDSSANG 161 (179)
Q Consensus 90 VrrfyeA~Na---~--D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~e---gD~~aV~ 161 (179)
++.+++.|++ + |++.++++|+||+++..| . +...|+++++++|+..++.+| +++++++++.. |+ ..+.
T Consensus 12 ~~~~ie~W~~~~~~~~dl~~l~a~~a~d~~mv~p-~-G~~~g~~~~~~~~~~~~g~~p-gl~i~i~~l~~~~~~~-d~~v 87 (128)
T 1tp6_A 12 AHVAIRDWLAGDSRADALDALMARFAEDFSMVTP-H-GVVLDKTALGELFRSKGGTRP-GLRIEIDGESLLASGV-DGAT 87 (128)
T ss_dssp HHHHHHHHHHTCCCTTHHHHHHTTEEEEEEEECT-T-SCEEEHHHHHHHHHHHTTCST-TCEEEEEEEEEEEEET-TEEE
T ss_pred HHHHHHHHHcCCCcHhHHHHHHHhcCCCEEEECC-C-CeECCHHHHHHHHHHhhCCCC-CeEEEEEEEEEEeecC-CEEE
Confidence 4556666654 4 899999999999999854 3 358899999999999999997 79999999532 33 3555
Q ss_pred EEEE
Q 030319 162 KESH 165 (179)
Q Consensus 162 v~w~ 165 (179)
++|.
T Consensus 88 v~y~ 91 (128)
T 1tp6_A 88 LAYR 91 (128)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5553
No 62
>2chc_A Protein RV3472; hypothetical protein; 1.69A {Mycobacterium tuberculosis} SCOP: d.17.4.25
Probab=98.36 E-value=1.8e-06 Score=66.13 Aligned_cols=77 Identities=16% Similarity=0.081 Sum_probs=57.5
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEe-e-ecCCCceEEE
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDD-I-SAEDSSANGK 162 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~e-v-~egD~~aV~v 162 (179)
...+++.+|+.+++++|++.+.++|+||+++..|+ .++.|+++++++++..+.. +...|+.-.. | ..|| .+.+
T Consensus 15 ~I~~l~~~y~~a~D~~D~~~~~~lf~~Da~~~~~g--~~~~G~~~i~~~~~~~~~~-~~~~h~~~~~~i~~~gd--~A~~ 89 (170)
T 2chc_A 15 RIQALCARYCLTINTQDGEGWAGCFTEDGAFEFDG--WVIRGRPALREYADAHARV-VRGRHLTTDLLYEVDGD--VATG 89 (170)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHTTEEEEEEEEETT--EEEESHHHHHHHHHHHHHH-CCCCEEEEEEEEEEETT--EEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHHHhcccCcEEEEeCC--CCcCCHHHHHHHHHHhhcc-cceEEecCCeEEEEeCC--EEEE
Confidence 35688999999999999999999999999998653 4688999999999998766 4334443222 2 2454 4555
Q ss_pred EEEE
Q 030319 163 ESHF 166 (179)
Q Consensus 163 ~w~l 166 (179)
+|.+
T Consensus 90 ~~~~ 93 (170)
T 2chc_A 90 RSAS 93 (170)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 63
>3b7c_A Uncharacterized protein; NTF-2 like protein, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.70A {Shewanella oneidensis} SCOP: d.17.4.16
Probab=98.33 E-value=3.3e-06 Score=61.81 Aligned_cols=82 Identities=17% Similarity=0.077 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhh--ccCceEeeCCCCCCccCHHHHHHHHHHHHHh-cC-CCeEEEEEeee-cCCCceE
Q 030319 86 GAVVVRRFYAGINGRDLASVEELI--ADDCVYEDLIFPRPFLGRKATLDFFKKFSDS-IS-SDLQFVIDDIS-AEDSSAN 160 (179)
Q Consensus 86 ~~~vVrrfyeA~Na~D~dal~eLf--ApD~v~~dp~~~~Pi~Greav~~ff~~~~~a-fp-~dl~~~I~ev~-egD~~aV 160 (179)
..+++.+|++|||++|++++.++| +||+++-++. +..+|++++++.++..+.. +. ..+++++.++. .++..++
T Consensus 7 I~~~~~~~~~A~~~~D~~~~~~~y~~~~d~~~~~~~--~~~~G~~~i~~~~~~~f~~~~~~~~l~~~~~~~~~~~~~~a~ 84 (122)
T 3b7c_A 7 IVQLLKGQEEAWNRGDLDAYMQGYWQNEQLMLISNG--KFRNGWDETLAAYKKNYPDKESLGELKFTIKEIKMLSNYAAM 84 (122)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTBCCSTTCEEECSS--CEEECHHHHHHHHHHHCSSGGGSCEEEEEEEEEEEEETTEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhhcCCCCEEEECCC--ccccCHHHHHHHHHHhcCChhhcCeeEEEEEEEEEcCCCEEE
Confidence 567899999999999999999999 8999998654 3689999999988876543 11 23667666643 2332444
Q ss_pred E-EEEEEEeC
Q 030319 161 G-KESHFLSA 169 (179)
Q Consensus 161 ~-v~w~lew~ 169 (179)
. .+|++...
T Consensus 85 v~~~~~~~~~ 94 (122)
T 3b7c_A 85 VVGRWDLKRL 94 (122)
T ss_dssp EEEEEEEECS
T ss_pred EEEEEEEEcc
Confidence 3 35776544
No 64
>2rgq_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.80A {Nostoc punctiforme} SCOP: d.17.4.25
Probab=98.30 E-value=3.8e-06 Score=63.06 Aligned_cols=65 Identities=12% Similarity=0.127 Sum_probs=51.6
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEe
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDD 151 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~e 151 (179)
...+++.+|..+++.+|++.+.+||+||++|..|. ++..|+++++++++.....++...+..+..
T Consensus 11 ~I~~l~~rya~~lD~~d~~~~~~lft~Da~~~~~~--g~~~g~~~i~~~~~~~~~~~~~~t~H~i~n 75 (144)
T 2rgq_A 11 EIMELAARFEMSLDKEDVENYLATFASDGALQGFW--GIAKGKEELRQGFYAMLDTFARGKRHCSSN 75 (144)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEEETT--EEEESHHHHHHHHHHHHHHTTTTEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHHHhhccCcEEEEcCC--CCCCCHHHHHHHHHHHHhhCCCCcEEecCC
Confidence 35678889999999999999999999999998653 456899999999998876665333333443
No 65
>3cnx_A Uncharacterized protein; putative dehydratase, NTF2-like protein, structural genomics center for structural genomics, JCSG; HET: MSE PGE PG6; 2.10A {Streptomyces avermitilis} SCOP: d.17.4.17
Probab=98.29 E-value=3.3e-06 Score=67.32 Aligned_cols=82 Identities=16% Similarity=0.184 Sum_probs=60.0
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCce-----------------EeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEE
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCV-----------------YEDLIFPRPFLGRKATLDFFKKFSDSISSDLQF 147 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v-----------------~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~ 147 (179)
...++..+||+||+++|++++.++|++|.. +-.|+ ..++.|+++|+++|+.++.+.+ .+++
T Consensus 13 ~I~~~~~~~~~A~~~gD~~~l~alwa~d~~~~~~~~~~~~~~~~~v~~v~Pg-~~~l~G~~~I~~~~~~~f~~~~-~~~~ 90 (170)
T 3cnx_A 13 QVGLANTAFYEAMERGDFETLSSLWLTPADLGVDEEYHDPADAGVVSCVHPG-WPVLSGRGEVLRSYALIMANTE-YIQF 90 (170)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHBCCHHHHTC------CCCTTCCEEECTT-CCEEEHHHHHHHHHHHHHHTCS-EEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcCCcccccccccccccccccEEEEcCC-CccccCHHHHHHHHHHHHccCC-eeEE
Confidence 356789999999999999999999999953 22233 3468999999999999998764 4777
Q ss_pred EEEee---ecCCCceEEEEEEEEe
Q 030319 148 VIDDI---SAEDSSANGKESHFLS 168 (179)
Q Consensus 148 ~I~ev---~egD~~aV~v~w~lew 168 (179)
++.++ ..||.-.+...+++..
T Consensus 91 ~~~dv~v~~~gD~A~v~~~~~~~~ 114 (170)
T 3cnx_A 91 FLTDVHVSVTGDTALVTCTENILS 114 (170)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEEEEeCCEEEEEEEEEEec
Confidence 76664 2455333334555554
No 66
>3b8l_A Uncharacterized protein; putative aromatic ring hydroxylase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.75A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=98.26 E-value=2.5e-06 Score=64.97 Aligned_cols=59 Identities=15% Similarity=0.282 Sum_probs=49.3
Q ss_pred CcHHHHHHHHHHHHhC-CCHHHHHhhhccCceEeeCCCC-CCccCHHHHHHHHHHHHHhcC
Q 030319 84 GGGAVVVRRFYAGING-RDLASVEELIADDCVYEDLIFP-RPFLGRKATLDFFKKFSDSIS 142 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na-~D~dal~eLfApD~v~~dp~~~-~Pi~Greav~~ff~~~~~afp 142 (179)
....+++.+|+.++++ +|++.+.+||+||++|..++.+ .++.|+++++++++..+..++
T Consensus 28 ~~I~~l~~~y~~alD~~~D~d~~~~lfteDa~~~~~~~g~~~~~G~~~i~~~~~~~~~~~~ 88 (163)
T 3b8l_A 28 LAIQDLMIAYAHAVDTVSDIDAVLDVFTEDAVFDLSGIGLTPQVGHAGIREFFTNVFANMS 88 (163)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHTTEEEEEEEECGGGTCCCEEHHHHHHHHHHHHHHHEE
T ss_pred HHHHHHHHHHHHHHCcCCCHHHHHhhcCCCEEEEecCCCCCCccCHHHHHHHHHHhhccCC
Confidence 3466889999999999 9999999999999999854432 268999999999998876654
No 67
>3ke7_A Putative ketosteroid isomerase; structural genomics, joint C structural genomics, JCSG, protein structure initiative; HET: MSE BCN; 1.45A {Parabacteroides distasonis atcc 8503}
Probab=98.23 E-value=4.6e-06 Score=63.98 Aligned_cols=79 Identities=13% Similarity=0.082 Sum_probs=58.4
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEee---ecCCCceEE
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDI---SAEDSSANG 161 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev---~egD~~aV~ 161 (179)
...+++.---++++++|++++.++|+||+++.||..+..+.|++++++||..+... ...++++.+. ..|| ...
T Consensus 15 ~~~~i~~~~~~~L~~gD~~~~~~lyapDvt~fDp~~~~~~~G~~a~r~yf~~~~~~--~~~~~ei~~p~V~v~gD--~A~ 90 (134)
T 3ke7_A 15 IPEMIISLEKEALASTDPMAFVELSDTDVIYFDPSLETKIEGLEQLRTYYKGMQLP--PADHFDMIRPVVQVAQN--IAV 90 (134)
T ss_dssp HHHHHHHHHHHHHHCSCTTHHHHHEEEEEEEECTTCSSCEESHHHHHHHHHHHCCC--CCSEEEEEEEEEEEETT--EEE
T ss_pred HHHHHHHHhHHHHhCCCHHHHHHhcCCCEEEEcCCCccccCCHHHHHHHHHhcccC--CcceEEEeCCeEEEeCc--eEE
Confidence 34555555555889999999999999999999987666789999999999885433 2368888774 3444 444
Q ss_pred EEEEEE
Q 030319 162 KESHFL 167 (179)
Q Consensus 162 v~w~le 167 (179)
++|.++
T Consensus 91 ~~y~l~ 96 (134)
T 3ke7_A 91 LTFNLD 96 (134)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 566554
No 68
>2rcd_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.32A {Pectobacterium atrosepticum SCRI1043} SCOP: d.17.4.18
Probab=98.23 E-value=5.4e-06 Score=61.09 Aligned_cols=80 Identities=16% Similarity=0.144 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhccCce--EeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCCCceEEE
Q 030319 86 GAVVVRRFYAGINGRDLASVEELIADDCV--YEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSSANGK 162 (179)
Q Consensus 86 ~~~vVrrfyeA~Na~D~dal~eLfApD~v--~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD~~aV~v 162 (179)
..+++.+|.+||+++|++++.++|++|.. ... .++.+.|++++++ |+..+...+...+.....+. -|+ ..+.+
T Consensus 16 i~~~~~~y~~A~~~~D~~~l~~lf~~d~~~~~~~--~~~~~~G~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~-d~A~~ 91 (129)
T 2rcd_A 16 VTAAFYRYEKALTGNDVAVLDELFWHDEKTVRYG--AGENLYGIEEIRA-FRLARPSAGLDRALRNTVITTYGH-DMAVA 91 (129)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHBCCSTTCEEEE--TTEEEESHHHHHH-HHHHSCCTTCCCEEEEEEEEEBTT-SEEEE
T ss_pred HHHHHHHHHHHHhcCCHHHHHHhccCCCCEEEEC--CCCccCCHHHHHH-HHHhcCCCCCceEEEEEEEEEecC-cEEEE
Confidence 34455555599999999999999999953 232 2346889999999 88887665444454333333 343 33334
Q ss_pred EEEEEeC
Q 030319 163 ESHFLSA 169 (179)
Q Consensus 163 ~w~lew~ 169 (179)
..++...
T Consensus 92 ~~~~~~~ 98 (129)
T 2rcd_A 92 STEFTRT 98 (129)
T ss_dssp EEEEECS
T ss_pred EEEEEEc
Confidence 5555544
No 69
>2rfr_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.16A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=98.18 E-value=3.5e-06 Score=63.05 Aligned_cols=52 Identities=17% Similarity=0.146 Sum_probs=45.4
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCc-cCHHHHHHHHHHHH
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPF-LGRKATLDFFKKFS 138 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi-~Greav~~ff~~~~ 138 (179)
...+++.+|..+++++|++.+.++|+||++|..++ +++ .|+++++++++...
T Consensus 20 ~I~~l~~~y~~a~D~~d~~~~~~lf~~Da~~~~~~--g~~~~G~~~i~~~~~~~~ 72 (155)
T 2rfr_A 20 EIRELIARYGPLADSGDAEALSELWVEDGEYAVVG--FATAKGRAAIAALIDGQT 72 (155)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEETT--SCCEESHHHHHHHHHSHH
T ss_pred HHHHHHHHHHHHhcCCCHHHHHhhcCCceEEEcCC--CccccCHHHHHHHHHhcc
Confidence 35678899999999999999999999999998764 356 89999999998774
No 70
>3a76_A Gamma-hexachlorocyclohexane dehydrochlorinase; barrel fold, lyase, detoxification; HET: SPD; 2.25A {Sphingomonas paucimobilis}
Probab=98.11 E-value=5.3e-06 Score=64.70 Aligned_cols=57 Identities=11% Similarity=0.075 Sum_probs=47.7
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHH-HHHHHhcC
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFF-KKFSDSIS 142 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff-~~~~~afp 142 (179)
...+++.+|..+++++|++.+.+||+||++|.-++.+ ++.|++++++++ +..+..++
T Consensus 32 ~I~~ll~ry~~alD~~d~d~~~~lfteDa~~~~~~~g-~~~G~~~i~~~~~~~~~~~~~ 89 (176)
T 3a76_A 32 AIQDLYSDKLIAVDKRQEGRLASIWWDDAEWTIEGIG-TYKGPEGALDLANNVLWPMFH 89 (176)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEEETTTE-EEEHHHHHHHHHHHTHHHHEE
T ss_pred HHHHHHHHHHHHhcCCCHHHHHhhccCCeEEEcCCCc-cccCHHHHHHHHHHhhhcccC
Confidence 4567888999999999999999999999999755533 689999999999 66665554
No 71
>3ef8_A Putative scyalone dehydratase; YP_496742.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE PG4; 1.50A {Novosphingobium aromaticivorans DSM12444} SCOP: d.17.4.28
Probab=98.04 E-value=5.5e-06 Score=62.81 Aligned_cols=80 Identities=10% Similarity=0.026 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee--cCCCceEEEE
Q 030319 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS--AEDSSANGKE 163 (179)
Q Consensus 86 ~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~--egD~~aV~v~ 163 (179)
..+++.+|..+++.+|++.+.+||+||+++..++.. .+.|++++++++......++...|+.-...+ .|| ..+.++
T Consensus 13 I~~l~~ry~~~~D~~d~~~~~~lFt~D~~~~~~~~~-~~~G~~~i~~~~~~~~~~~~~~~H~~~n~~I~~~gd-d~A~~~ 90 (150)
T 3ef8_A 13 IERMMFDYSYHLDMNHPEELAALFVEDCEVSYAPNF-GATGRDAYKKTLEGIGTFFRGTSHHNSNICIDFVSE-TEANVR 90 (150)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEEETTE-EEESHHHHHHHTTTHHHHEEEEEEEEEEEEEEEEET-TEEEEE
T ss_pred HHHHHHHHHHHhcCCCHHHHHhhccCceEEEccCCC-CCCCHHHHHHHHHHhhcccCceEEecCCEEEEEcCC-CEEEEE
Confidence 467889999999999999999999999998754433 4789999999998876655433344333322 343 355555
Q ss_pred EEEE
Q 030319 164 SHFL 167 (179)
Q Consensus 164 w~le 167 (179)
|.+.
T Consensus 91 ~~~~ 94 (150)
T 3ef8_A 91 SVVL 94 (150)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
No 72
>3ejv_A Uncharacterized protein with cystatin-like fold; structural genomics, joint center for ST genomics, JCSG; HET: MSE PGE; 1.40A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} SCOP: d.17.4.28
Probab=97.99 E-value=6.6e-06 Score=65.16 Aligned_cols=80 Identities=15% Similarity=0.079 Sum_probs=57.3
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeC-CC------CCCccCHHHHHHHHHHHHHh---cCCCeEEEEEe-e-
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDL-IF------PRPFLGRKATLDFFKKFSDS---ISSDLQFVIDD-I- 152 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp-~~------~~Pi~Greav~~ff~~~~~a---fp~dl~~~I~e-v- 152 (179)
...+++.+|..+++.+|++.+.+||+||+++.-+ .. .++++|+++|+++++..+.. ++...|+.-.. |
T Consensus 27 ~I~~l~~~y~~~~D~~d~d~~~~lFt~D~~~~~~~~~Gg~~g~~~~~~Gr~aI~~~~~~~~~~~~~~~~t~H~~~n~~I~ 106 (179)
T 3ejv_A 27 IILNVLGQYTRAHDRRDPDAMAALFAPEATIEIVDAVGGASRSISRLEGRDAIRVAVRQMMAPHGYRAWSQNVVNAPIIV 106 (179)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEEEEECGGGCCEEEEEEESHHHHHHHHHHSSCCCCTTEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCHHHHHhhcCCceEEEEeccCCCcCCCcceecCHHHHHHHHHHhhcccccccceEEEcCCCEEE
Confidence 4678899999999999999999999999997632 11 13689999999999998766 44223433333 2
Q ss_pred ecCCCceE--EEEEEE
Q 030319 153 SAEDSSAN--GKESHF 166 (179)
Q Consensus 153 ~egD~~aV--~v~w~l 166 (179)
..|| .+ .++|.+
T Consensus 107 vdgD--~A~~~~~~y~ 120 (179)
T 3ejv_A 107 IEGD--HAVLDAQFMV 120 (179)
T ss_dssp EETT--EEEEEEEEEE
T ss_pred EcCC--eeEEEEEEEE
Confidence 2455 34 566654
No 73
>2owp_A Hypothetical protein BXE_B1374; cystatin-like fold, DUF3225 family protein, structural genom joint center for structural genomics, JCSG; 2.00A {Burkholderia xenovorans} SCOP: d.17.4.18
Probab=97.89 E-value=6.5e-05 Score=56.54 Aligned_cols=54 Identities=7% Similarity=0.011 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHH
Q 030319 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSD 139 (179)
Q Consensus 86 ~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~ 139 (179)
-.+++.+|++||+++|++++.+||++|..+-..+.++.+.|.++|++|...+..
T Consensus 13 I~~~~~~y~~Al~~~D~~~L~~lf~~d~~~v~~~~g~~l~G~~~I~a~r~~~~~ 66 (129)
T 2owp_A 13 VQAAFVEYERALVENDIEAMNALFWHTPETVRYGIAEVQHGGEAIRAWRERCEP 66 (129)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTBCCSTTCEEECSSCEEESHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHhCCHHHHHhhccCCCcEEEeCCCCccCCHHHHHHHHHhcCC
Confidence 456778889999999999999999999753222335678999999996555544
No 74
>3gzb_A Putative snoal-like polyketide cyclase; YP_001182657.1, STRU genomics, joint center for structural genomics, JCSG; HET: MSE; 1.44A {Shewanella putrefaciens} PDB: 3lza_A*
Probab=97.59 E-value=0.00045 Score=53.86 Aligned_cols=73 Identities=14% Similarity=0.311 Sum_probs=65.0
Q ss_pred CCcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee-cCC
Q 030319 83 DGGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AED 156 (179)
Q Consensus 83 ~~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~-egD 156 (179)
....++++.+|++||..+|...+..+|..|-||.|-..++...|++.|.+|+++..+.+ ....|-+++.. .|-
T Consensus 19 mP~EqqlA~~Yi~AlT~hDy~~L~~FynrdsVf~D~ta~~~YtG~r~Ii~Fl~RaH~gv-Ley~fnieHmfnsGs 92 (154)
T 3gzb_A 19 MPQEQQLAVKYMDALTEHDYKTLITFYNRDSIFFDKTANRKYTGGRFIIDFLERAHQGV-LEYDFNIEHMYNAGS 92 (154)
T ss_dssp SCHHHHHHHHHHHHHHTTCHHHHHTTCCTTCEEEETTTTEEEESHHHHHHHHHHHTTTC-CCCEEEEEEEEEETT
T ss_pred CcHHHHHHHHHHHHHhccCHHHHHHHhCccceeeeeccCcceeCcHHHHHHHHHHhhhh-eeeccChhhhccCCc
Confidence 35677899999999999999999999999999999888888999999999999999887 47889999975 453
No 75
>2imj_A Hypothetical protein DUF1348; alpha beta protein, structural genomics, PSI-2, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5} SCOP: d.17.4.23
Probab=97.58 E-value=0.00036 Score=55.31 Aligned_cols=85 Identities=12% Similarity=0.076 Sum_probs=66.2
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEee-ecCCCceEEE
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDI-SAEDSSANGK 162 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev-~egD~~aV~v 162 (179)
.++.+-|+.--++||.+|.+.+.-.|++|++|.+-. +-+.|+++|.+|+.+-.+.= .+.+.. .++ +-. ...++|
T Consensus 17 EtA~~KVr~AEDaWNsrdP~rValAYT~Ds~WRNR~--eF~~GR~eI~~FLtrKW~rE-~dYrLi-KELwaf~-~nRIAV 91 (166)
T 2imj_A 17 ESAIEKIRLAEDGWNSRDPERVSLAYTLDTQWRNRA--EFAHNREEAKAFLTRKWAKE-LDYRLI-KELWAFT-DNRIAV 91 (166)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHTTEEEEEEEEETT--EEECSHHHHHHHHHHHHHHS-EEEEEE-EEEEEEE-TTEEEE
T ss_pred HHHHHHHHHHHhhhcccChHHHhhccCCCCceeccc--cccCcHHHHHHHHHHHHHhh-ccchhh-hhhheec-CCeEEE
Confidence 567788888889999999999999999999999743 34789999999999987542 244433 443 322 259999
Q ss_pred EEEEEeCCcee
Q 030319 163 ESHFLSAKVAA 173 (179)
Q Consensus 163 ~w~lew~~~~~ 173 (179)
++.-||.+...
T Consensus 92 RFaYEw~D~~g 102 (166)
T 2imj_A 92 RYAYEWHDDSG 102 (166)
T ss_dssp EEEEEEECTTS
T ss_pred EEEeEEecCCC
Confidence 99999988764
No 76
>2r4i_A Uncharacterized protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG; HET: MSE CIT; 1.60A {Cytophaga hutchinsonii atcc 33406} SCOP: d.17.4.15
Probab=97.33 E-value=0.00056 Score=48.42 Aligned_cols=48 Identities=15% Similarity=0.229 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHH
Q 030319 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFK 135 (179)
Q Consensus 86 ~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~ 135 (179)
-.++.++|++|++++|++.+.+|++||+++-.+. +...|++++.+.++
T Consensus 8 i~~l~~~~~~A~~~~D~~~l~~l~~~d~~~~~~~--G~~~~~~~~i~~~~ 55 (123)
T 2r4i_A 8 ILDCEKKLLTAIQNNDVESLEVLLHDDLLFIIPS--GETVTKETDIAAYS 55 (123)
T ss_dssp HTHHHHHHHHHHHHTCHHHHHHHEEEEEEEECTT--SCEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHhhhCcCeEEECCC--CCCccHHHHHHHHh
Confidence 3467889999999999999999999999998764 34679987665554
No 77
>4gb5_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, snoal-like domain, unknown function; HET: PGE; 1.55A {Kribbella flavida}
Probab=97.26 E-value=0.00045 Score=52.11 Aligned_cols=80 Identities=8% Similarity=0.029 Sum_probs=56.2
Q ss_pred cHHHHHHHHHHHHhCCCHHHH-HhhhccCceEeeCC---CCCCccCHHHHHHHHHHHHHhcCCCeEEEEEeee--cCCCc
Q 030319 85 GGAVVVRRFYAGINGRDLASV-EELIADDCVYEDLI---FPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS--AEDSS 158 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal-~eLfApD~v~~dp~---~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev~--egD~~ 158 (179)
...+++.+|..++..+|++.+ .+||+||+++.-.+ ......|++++.+++...+..++...|+.-..++ .||
T Consensus 12 ~I~~L~~rY~~~~D~~d~~~l~~~~ft~Da~~d~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~t~H~~~n~~I~vdgD-- 89 (159)
T 4gb5_A 12 EIIELFGRYADIADLKEFTDLPRRVHTDPLTIDFESVTGMPPMTVPLSDYGAALRASFGAFSATHHAITGHVVTIDSD-- 89 (159)
T ss_dssp HHHHHHHHHHHHHHTTCCSSHHHHHEEEEEEEECHHHHCCCCEEECHHHHHHHHHHHHTTCSEEEEEEEEEEEEEETT--
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHhhCcCCEEEEecCCCCCcccccHHHHHHHHHHHhccCCceEEEecCCceEEEcCC--
Confidence 456889999999999998765 68999999986322 2234679999999999988877644444444333 454
Q ss_pred eEEEEEEE
Q 030319 159 ANGKESHF 166 (179)
Q Consensus 159 aV~v~w~l 166 (179)
....++.+
T Consensus 90 ~A~~~~~~ 97 (159)
T 4gb5_A 90 RATIHAHV 97 (159)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 44455443
No 78
>2f86_B Hypothetical protein K11E8.1D; UNC-43, oligomerization domain, transferase; 2.64A {Caenorhabditis elegans} SCOP: d.17.4.7
Probab=97.24 E-value=0.00044 Score=52.93 Aligned_cols=74 Identities=9% Similarity=0.031 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCC-CCCCccCHHHHHHHHHHHHHhcCCCeEEEEEee---ecCCCceEE
Q 030319 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLI-FPRPFLGRKATLDFFKKFSDSISSDLQFVIDDI---SAEDSSANG 161 (179)
Q Consensus 86 ~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~-~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev---~egD~~aV~ 161 (179)
..+++.+|.+|++++|++++.+|++||+++-+|. .+.-+.|.+.++.||... .. ..+++++.++ ..|+..++.
T Consensus 14 I~~~~~~~~~Ai~~gD~~~~~~l~~~dv~~Fd~~~~g~~~~g~~~~r~~f~~~--~~-~~~~~~~~~~~V~~~g~d~Av~ 90 (143)
T 2f86_B 14 IVRVTQTLLDAISCKDFETYTRLCDTSMTCFEPEALGNLIEGIEFHRFYFDGN--RK-NQVHTTMLNPNVHIIGEDAACV 90 (143)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECGGGTTCCEETTHHHHTTSSSC--SC-CSCEEEEEEEEEEEETTTEEEE
T ss_pred HHHHHHHHHHHHHccCHHHHHHhcCCCEEEEccCcCCccccCHHHHHHHHhcc--cC-CcceeEEEcceEEEeCCCEEEE
Confidence 4578899999999999999999999999998762 344588999888554321 12 2456776662 245335554
Q ss_pred E
Q 030319 162 K 162 (179)
Q Consensus 162 v 162 (179)
.
T Consensus 91 ~ 91 (143)
T 2f86_B 91 A 91 (143)
T ss_dssp E
T ss_pred E
Confidence 4
No 79
>3fsd_A NTF2-like protein of unknown function in nutrient; YP_427473.1, NTF2-like protein of unknown function in nutrie uptake; HET: UNL; 1.70A {Rhodospirillum rubrum atcc 11170} SCOP: d.17.4.0
Probab=97.08 E-value=0.0019 Score=47.58 Aligned_cols=51 Identities=24% Similarity=0.292 Sum_probs=40.8
Q ss_pred CCcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHH
Q 030319 83 DGGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFK 135 (179)
Q Consensus 83 ~~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~ 135 (179)
...-.++.++|++|++++|++++.+|++||+++-.+. + ...+++++.+.++
T Consensus 13 ~~~I~~l~~~~~~A~~~~D~~~l~~L~~~d~~~v~~~-G-~~~~~~~~l~~~~ 63 (134)
T 3fsd_A 13 ADDIAFYEERLRAAMLTGDLKGLETLLADDLAFVDHT-G-CVKTKQTHLEPYR 63 (134)
T ss_dssp -CCHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECTT-S-CEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHhhcCCCEEEECCC-C-cCccHHHHHHHHH
Confidence 3568899999999999999999999999999987643 3 4667776655544
No 80
>3blz_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.75A {Shewanella baltica} SCOP: d.17.4.14
Probab=96.93 E-value=0.0024 Score=46.85 Aligned_cols=79 Identities=11% Similarity=0.121 Sum_probs=51.2
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhc--CCCeEEEEEee-ecCCCceEE
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSI--SSDLQFVIDDI-SAEDSSANG 161 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~af--p~dl~~~I~ev-~egD~~aV~ 161 (179)
...+++.+|+++++.+|.+.+.++|+||+.+......+++.+ ..+.+|+..+...| .+..+..+..+ ..|| ...
T Consensus 13 aI~~~~~~y~~a~~~~D~~~l~~~f~~da~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~i~i~gd--~A~ 89 (128)
T 3blz_A 13 AIVEVLSKYNEGGKKADSTIMRPAFSSQATIFGVDVDNKLTG-GPIQGLFDVIDNVFHPSPEAKAAIARIDIVGT--AAS 89 (128)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHGGGEEEEEEEEEECTTSCEEE-EETHHHHHHHHHTCCCCTTCEEEEEEEEEETT--EEE
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHhhCCCcEEEEEeCCCcEEe-cCHHHHHHHHHhcCCCCccccCeEEEEEEECC--EEE
Confidence 467899999999999999999999999999864321223222 23566666665553 12334446665 3565 444
Q ss_pred EEEEE
Q 030319 162 KESHF 166 (179)
Q Consensus 162 v~w~l 166 (179)
+++.+
T Consensus 90 a~~~~ 94 (128)
T 3blz_A 90 ARIDT 94 (128)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 45555
No 81
>3ecf_A NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Anabaena variabilis atcc 29413} SCOP: d.17.4.21
Probab=96.73 E-value=0.0032 Score=47.79 Aligned_cols=83 Identities=10% Similarity=0.187 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEe-eecCCCceEEEEE
Q 030319 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDD-ISAEDSSANGKES 164 (179)
Q Consensus 86 ~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~e-v~egD~~aV~v~w 164 (179)
..++|..|+.+|..+|+..+- |++|+.|..|--..++.|++.+..|+........ .+.+.+ +++++ .+.-.|
T Consensus 7 ~v~iieqYl~aF~TgdfS~Vq--Fs~~~~F~sPir~~~l~G~~tV~gFlt~V~trVa---~V~i~~hiVeyp--~as~vf 79 (130)
T 3ecf_A 7 YHEILKKYFLSFETGDFSQVQ--FSCNLEFLSPISGNTLKGTEEVIPFLKGVTTRVA---EVNIMSTTVEYP--RASGVW 79 (130)
T ss_dssp HHHHHHHHHHHHHHCCCTTSC--EEEEEEECCTTCSSCEESHHHHHHHHHHHHTTEE---EEEEEEEEEETT--EEEEEE
T ss_pred HHHHHHHHHHHHhcCCeeecc--cccCcEEecCccCCCccCchhHHHHHhhhhhhhh---eeeeeEEEeccC--ccceeE
Confidence 457899999999999998764 9999999977445589999999999999875543 455555 55665 788889
Q ss_pred EEEeCCceeee
Q 030319 165 HFLSAKVAAFI 175 (179)
Q Consensus 165 ~lew~~~~~~~ 175 (179)
.|+..+-.-|+
T Consensus 80 ~m~TtkG~~~~ 90 (130)
T 3ecf_A 80 QMRTTKGTLYT 90 (130)
T ss_dssp EEEETTSCEEE
T ss_pred EEEeccceEEE
Confidence 99887665544
No 82
>3soy_A NTF2-like superfamily protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.00A {Salmonella enterica subsp}
Probab=96.69 E-value=0.0012 Score=50.05 Aligned_cols=48 Identities=13% Similarity=0.024 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhccC--ceEeeCCCCCCccCHHHHHHHHH
Q 030319 86 GAVVVRRFYAGINGRDLASVEELIADD--CVYEDLIFPRPFLGRKATLDFFK 135 (179)
Q Consensus 86 ~~~vVrrfyeA~Na~D~dal~eLfApD--~v~~dp~~~~Pi~Greav~~ff~ 135 (179)
..++..+|++||+++|++++.+||++| +++-.|. + ..+|++++++.|.
T Consensus 12 i~~~~~~~~~Al~~~D~~~l~~l~~~~~~~~~i~~~-g-~~~G~~~i~~~~~ 61 (145)
T 3soy_A 12 ITEGINRYLYSIDKADPTLGKQLFYVSPETSFIHPR-G-HERGWSQIAENFY 61 (145)
T ss_dssp HHHHHHHHHHHHHTTCHHHHTTTBCCSSSCEEEETT-E-EEESHHHHHHHCC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHhCCCCeEEEcCC-C-cccCHHHHHHHHH
Confidence 567889999999999999999999876 5664443 2 4789999987774
No 83
>3duk_A NTF2-like protein of unknown function; structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.20A {Methylobacillus flagellatus KT} SCOP: d.17.4.0
Probab=95.89 E-value=0.031 Score=41.28 Aligned_cols=86 Identities=10% Similarity=0.071 Sum_probs=52.3
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCC-cc--CHHHHHHHHHHHHHhcCCCeEEEEEeee-cCCCceE
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRP-FL--GRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSSAN 160 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~P-i~--Greav~~ff~~~~~afp~dl~~~I~ev~-egD~~aV 160 (179)
.-.+++.+|++++.++|.+.+.++|+||+.+.... .++ +. ..+++.++...- ...+ ..+..|..+. .|| ..
T Consensus 13 aI~~~l~~y~~g~~~~D~~~l~~~f~pda~~~~~~-~G~~l~~~~~~e~~~~v~~~-~p~~-~~~~~I~~I~i~gd--~A 87 (125)
T 3duk_A 13 GITEVLNVYMNAAESGTGEEMSAAFHKDATIFGYV-GDKLAFNGPIKDLYDWHNSN-GPAK-NVQSRITNIDIVGT--VA 87 (125)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHGGGEEEEEEEEEEE-TTEEEEEEETHHHHHHHHHH-CCCT-TCEEEEEEEEEETT--EE
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHhCCCCcEEEEEc-CCCEEeeCCHHHHHHHHhcc-CCCC-cccceEEEEEEECC--EE
Confidence 35678999999999999999999999999986321 223 22 224444443322 2233 4566776653 555 44
Q ss_pred EEEEEEE-eCCceeeee
Q 030319 161 GKESHFL-SAKVAAFIN 176 (179)
Q Consensus 161 ~v~w~le-w~~~~~~~~ 176 (179)
.++..++ +.+ ..|++
T Consensus 88 ~a~v~~~~~~~-~~f~D 103 (125)
T 3duk_A 88 HARVEAENWTN-FKFSD 103 (125)
T ss_dssp EEEEEEECSSS-CCEEE
T ss_pred EEEEEEEEcCC-CeEEE
Confidence 4444444 443 24443
No 84
>2gbw_B Biphenyl 2,3-dioxygenase beta subunit; rieske oxygenase, oxidoreductase, non heme iron; 1.70A {Sphingobium yanoikuyae} PDB: 2gbx_B* 2ckf_B
Probab=95.46 E-value=0.074 Score=41.17 Aligned_cols=56 Identities=9% Similarity=-0.059 Sum_probs=42.0
Q ss_pred cHHHHHHHHHHHHhCCCHHHHH-hhhccCceEeeCCCCC--------C---------ccCHHHHHHHHHHHHHh
Q 030319 85 GGAVVVRRFYAGINGRDLASVE-ELIADDCVYEDLIFPR--------P---------FLGRKATLDFFKKFSDS 140 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~-eLfApD~v~~dp~~~~--------P---------i~Greav~~ff~~~~~a 140 (179)
...+++-+|..+++.+|++... +||+||++|.-|..+. . ..|++.++.....+...
T Consensus 15 ~I~~~l~rya~~lD~~d~d~w~~~lfteD~~y~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~rv~~l~~~ 88 (174)
T 2gbw_B 15 DIEAHYRAEVRMFQTGQYREWLQGMVAEDIHYWMPIYEQRLTRDRRPDPTPDDAAIYNDDFGELKQRVERLYSG 88 (174)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTEEEEEEEEEECCCCCCTTCCCCCCCTTSCEEEEECHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHhccccHHHHHHhhccCCEEEEeeccccccccccccCCCcccceeEcCCHHHHHHHHHHHhcC
Confidence 3456677777789999999999 9999999997544321 0 24788888888877654
No 85
>3eby_A Beta subunit of A putative aromatic-ring-hydroxyl dioxygenase; YP_001165631.1; 1.75A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} SCOP: d.17.4.4
Probab=94.87 E-value=0.04 Score=42.28 Aligned_cols=54 Identities=15% Similarity=0.164 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCC-----CC-----ccCHHHHHHHHHHHHH
Q 030319 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFP-----RP-----FLGRKATLDFFKKFSD 139 (179)
Q Consensus 86 ~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~-----~P-----i~Greav~~ff~~~~~ 139 (179)
..+++-+|-.++..+|++...+||+|||+|.-|+.. .| ..|++.++.....+..
T Consensus 16 I~~ll~rya~~lD~~d~d~w~~lft~D~~y~~p~~~~~~~~~~~~~~~~~~~~~l~~rv~~l~~ 79 (163)
T 3eby_A 16 IDDFNAAYGLCLDDDRLEQWPTLFVDDCLYQVIARENVDNGLPAAVMYCDSKGMLADRVVALRK 79 (163)
T ss_dssp HHHHHHHHHHHHHTTCGGGTGGGEEEEEEEEEEEGGGGGSSSCCEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHhhcCCEEEEeeccccCCCCCCcEEEEcCCHHHHHHHHHHhhc
Confidence 456677777789999999999999999999754321 11 1588888887777654
No 86
>1uli_B Biphenyl dioxygenase small subunit; alpha3 BETA3 hetero hexamer, oxidoreductase; 2.20A {Rhodococcus SP} SCOP: d.17.4.4 PDB: 1ulj_B* 3en1_B* 3eqq_B
Probab=94.84 E-value=0.21 Score=39.31 Aligned_cols=56 Identities=14% Similarity=-0.017 Sum_probs=40.5
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCC-------------C-----ccCHHHHHHHHHHHHHh
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPR-------------P-----FLGRKATLDFFKKFSDS 140 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~-------------P-----i~Greav~~ff~~~~~a 140 (179)
...+++-+|-.+++.+|++...+||+|||+|.-|.... + ..|++.++.....+...
T Consensus 25 eI~~~l~r~A~lLD~~d~d~w~~lfteD~~y~~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Rv~rl~~~ 98 (187)
T 1uli_B 25 EIEQFYYWEAKLLNDRRFQEWFDLLAEDIHYFMPIRTTRIMRETAQEYSGAREYAHFDDNAQMMRGRLRKITSD 98 (187)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEEEECBCCCCGGGGGGSBCCTTSCEEEEECHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHhcCcCHHHHHHHcccCEEEEeeccccccccccccccCCccceeeecCCHHHHHHHHHHHhcc
Confidence 34556666667899999999999999999997554321 0 14777888777776543
No 87
>2b1x_B Naphthalene dioxygenase small subunit; rieske non-heme iron oxygenase, oxidoreductase; 2.00A {Rhodococcus SP} SCOP: d.17.4.4 PDB: 2b24_B
Probab=94.60 E-value=0.14 Score=39.27 Aligned_cols=55 Identities=7% Similarity=-0.155 Sum_probs=41.0
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCC--------C-------ccCHHHHHHHHHHHHH
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPR--------P-------FLGRKATLDFFKKFSD 139 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~--------P-------i~Greav~~ff~~~~~ 139 (179)
...+++-+|..+++.+|++...+||+||++|.-|..+. + ..|++.++.....+..
T Consensus 14 ~I~~ll~rya~~lD~~d~d~w~~lft~D~~y~~p~~~~~~~~~~~d~~~~~~~~~~~~~~l~~rv~~l~~ 83 (172)
T 2b1x_B 14 EITEWLYMEAELLDAGKYREWLALVTEDLSYVVPIRVTREREAVTDVVEGMTHMDDDADSMEMRVLRLET 83 (172)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEEEEECCCCTTSSCCEEEEEEEEEECHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhccCHHHHHHhccCCEEEEEEeecccccccccCCCcccEEEeCCHHHHHHHHHHHhc
Confidence 35667777778899999999999999999997543221 0 1388999887776653
No 88
>3fka_A Uncharacterized NTF-2 like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.69A {Silicibacter pomeroyi dss-3}
Probab=94.44 E-value=0.16 Score=37.08 Aligned_cols=85 Identities=13% Similarity=0.101 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHH--hcC-CCeEEEEEeee-cCCCceEE
Q 030319 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSD--SIS-SDLQFVIDDIS-AEDSSANG 161 (179)
Q Consensus 86 ~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~--afp-~dl~~~I~ev~-egD~~aV~ 161 (179)
-.+++.+|++++..+|.+.+.+.|+||+.+.... .+++... .+.+|+. +.. +.. ...+.+|..+. .|| ...
T Consensus 11 I~~~l~~Y~~g~~~~D~~~l~~~FhpdA~~~~~~-~g~~~~~-~~~~~~~-v~~~p~~~~~~~~~~i~~I~i~gd--~A~ 85 (120)
T 3fka_A 11 LTALVETYVMAMTRGDRPALERIFFGKASEVGHY-EGELLWN-SRDAFIA-MCEDAADAETDPFWAISSVSVQGD--IAM 85 (120)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEEEE-TTEEEEE-EHHHHHH-HHHHHCCSSCCCCEEEEEEEEETT--EEE
T ss_pred HHHHHHHHHHHHHhcCHHHHHhhCCCCeEEEEec-CCcEEEc-CHHHHHh-hcCCccCCCCCceEEEEEEEEECC--EEE
Confidence 5678999999999999999999999999986322 2222211 2445555 432 111 12345566653 454 444
Q ss_pred EEEEEEeCCceeeee
Q 030319 162 KESHFLSAKVAAFIN 176 (179)
Q Consensus 162 v~w~lew~~~~~~~~ 176 (179)
++..+.|.+ ..|++
T Consensus 86 a~v~~~~~~-~~f~D 99 (120)
T 3fka_A 86 LHVENDWAG-MRFDD 99 (120)
T ss_dssp EEEEEEETT-EEEEE
T ss_pred EEEEEEcCC-CceEE
Confidence 555566654 23443
No 89
>3ujm_A Rasputin; NTF2-like fold, RAS signaling, signaling protein; HET: EPE; 2.74A {Drosophila melanogaster}
Probab=94.25 E-value=0.15 Score=37.64 Aligned_cols=84 Identities=11% Similarity=0.178 Sum_probs=59.4
Q ss_pred CCcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEee----ecCCCc
Q 030319 83 DGGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDI----SAEDSS 158 (179)
Q Consensus 83 ~~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev----~egD~~ 158 (179)
+...++-|+.||..++. |.+.|..+|.++..+-.. -+.++.|+++|.+.+..+- +. +.+..|..+ ..+++.
T Consensus 4 ~~vg~~Fv~~YY~~ld~-~r~~L~~~Y~~~s~~~~~-~~~~~~G~~~I~~~l~~Lp--f~-~~~~~I~t~D~Qp~~~~gi 78 (120)
T 3ujm_A 4 MSVGREFVRQYYTLLNK-APNHLHRFYNHNSSYIHG-ESKLVVGQREIHNRIQQLN--FN-DCHAKISQVDAQATLGNGV 78 (120)
T ss_dssp CCHHHHHHHHHHHHHHH-CGGGGGGGEEEEEEEEET-TCCCEESHHHHHHHHHHHC--CC-SCEEEEEEEEEEEEGGGEE
T ss_pred HHHHHHHHHHHHHHHhc-CHHHHhhhecccceEEEc-CCcEecCHHHHHHHHHcCC--Cc-ceEEEEecccceEcCCCCE
Confidence 35678899999999984 788899999999754322 1346899999999998762 32 566666443 234456
Q ss_pred eEEEEEEEEeCCc
Q 030319 159 ANGKESHFLSAKV 171 (179)
Q Consensus 159 aV~v~w~lew~~~ 171 (179)
-|.|...+..++.
T Consensus 79 li~V~G~l~~~~~ 91 (120)
T 3ujm_A 79 VVQVTGELSNDGQ 91 (120)
T ss_dssp EEEEEEEEESTTC
T ss_pred EEEEEEEEEeCCC
Confidence 6677777776664
No 90
>2qiy_A UBP3-associated protein BRE5; deubiquitylation, ubiquitin-specific processing proteases(UB NTF2, protein-protein recognition; 1.69A {Saccharomyces cerevisiae} SCOP: d.17.4.2 PDB: 1zx2_A
Probab=93.69 E-value=0.15 Score=39.16 Aligned_cols=85 Identities=13% Similarity=0.186 Sum_probs=59.3
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCC-------------CCCccCHHHHHHHHHHHHHhcCCCeEEEEE
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIF-------------PRPFLGRKATLDFFKKFSDSISSDLQFVID 150 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~-------------~~Pi~Greav~~ff~~~~~afp~dl~~~I~ 150 (179)
....+.|+.||..++. |-+.|..+|.++..+..... +..+.|+++|.+++..+...|. +.++.|.
T Consensus 13 ~v~~~Fv~~YY~~~d~-~r~~L~~~Y~~~S~~s~~~~~~~s~~~~~d~~~~~~~~G~~~I~~~l~~L~~pf~-~~~h~I~ 90 (154)
T 2qiy_A 13 DICFAFLQNYYERMRT-DPSKLAYFYASTAELTHTNYQSKSTNEKDDVLPTVKVTGRENINKFFSRNDAKVR-SLKLKLD 90 (154)
T ss_dssp HHHHHHHHHHHHHHHH-CGGGGGGGEEEEEEEEEECTTCC----CCSSCCEEEEESHHHHHHHHHHTHHHHT-TEEEEEE
T ss_pred HHHHHHHHHHHHHHhC-CHHHHHHhhCCCcEEEEccccccccccccccccceEeeCHHHHHHHHHhccCCCC-ceEEEEE
Confidence 5678889999999987 78899999999987743321 3468899999999998843343 4566665
Q ss_pred ee----e-cC-CCceEEEEEEEEeCC
Q 030319 151 DI----S-AE-DSSANGKESHFLSAK 170 (179)
Q Consensus 151 ev----~-eg-D~~aV~v~w~lew~~ 170 (179)
.+ . .+ ++.-|.|...+...+
T Consensus 91 s~D~q~~~~~~~~ilI~V~G~~~~~~ 116 (154)
T 2qiy_A 91 TIDFQYTGHLHKSILIMATGEMFWTG 116 (154)
T ss_dssp EEEEEEESGGGCEEEEEEEEEEEETT
T ss_pred EEEEEEccCCCCEEEEEEEEEEEECC
Confidence 53 2 21 445566666666544
No 91
>1wql_B Ethylbenzene dioxygenase small subunit; biphenyl dioxygenase, cumene dioxygenase; 2.20A {Pseudomonas fluorescens} SCOP: d.17.4.4
Probab=93.34 E-value=0.68 Score=36.28 Aligned_cols=55 Identities=11% Similarity=-0.073 Sum_probs=39.0
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCC-----C------CCc-------cCHHHHHHHHHHHHH
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIF-----P------RPF-------LGRKATLDFFKKFSD 139 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~-----~------~Pi-------~Greav~~ff~~~~~ 139 (179)
...+++-+|-.+++.+|++...+||+|||+|.-|.. + .|. .|++.++.-...+..
T Consensus 24 eI~~~l~r~A~lLD~~d~~~w~~lfteD~~y~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~Rv~rl~~ 96 (186)
T 1wql_B 24 AVEQFYYREAQLLDYQNYEAWLALLTQDIQYWMPIRTTHTSRNKAMEYVPPGGNAHFDETYESMRARIRARVS 96 (186)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTBCTTCCEEEECBCCCCGGGGGGSBCCTTSCEEEEECHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCcCHHHHHHHhhCCEEEEeeccccccccccccccCCccceEEEeCCHHHHHHHHHHHhc
Confidence 445566666678999999999999999999975543 1 122 466777766665543
No 92
>3ksp_A Calcium/calmodulin-dependent kinase II associatio; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG; HET: MSE NHE; 2.59A {Exiguobacterium sibiricum 255-15}
Probab=93.16 E-value=0.13 Score=38.71 Aligned_cols=46 Identities=13% Similarity=0.088 Sum_probs=38.0
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHH
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLD 132 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ 132 (179)
.-.++.+++++|+-++|.++|.+|++||.++-.+. + -...|+.+.+
T Consensus 10 ~~~~le~~~~~A~~~~D~~~L~~LL~ddf~~v~~s-G-~~~~K~~~L~ 55 (129)
T 3ksp_A 10 QLQTLLSERHAYLMEGNREAMHQLLSSDFSFIDGQ-G-RQFDAETYLD 55 (129)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECTT-C-CEECHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHhhcCCCEEEECCC-C-CCcCHHHHHH
Confidence 34678889999999999999999999999998543 3 3679987666
No 93
>3e99_A Benzoate 1,2-dioxygenase beta subunit; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Burkholderia mallei atcc 23344} SCOP: d.17.4.4
Probab=92.45 E-value=0.87 Score=35.22 Aligned_cols=53 Identities=11% Similarity=0.075 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCC-------CC--------ccCHHHHHHHHHHHH
Q 030319 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFP-------RP--------FLGRKATLDFFKKFS 138 (179)
Q Consensus 86 ~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~-------~P--------i~Greav~~ff~~~~ 138 (179)
..+++-+|-.+++.+|++...+||+|||.|.-|... .| ..+++.++.-..++.
T Consensus 10 i~~~l~~~a~~lD~~~~~~w~~lf~~D~~Y~~p~~~~~~~~~~d~~~~~~~i~~~~~~~L~~RV~rl~ 77 (164)
T 3e99_A 10 IQAFLYRESRLLDDKAWDAWLDCYRADAVFWMPSWDDADALVTDPQREISLIYYPNRQGLEDRVFRIK 77 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEEECCCC-----------CEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHhcCCCEEEEEeccccccccccCCCCcceEEEcCCHHHHHHHHHHHh
Confidence 456677777789999999999999999999866542 12 256777765555553
No 94
>1zo2_A NTF2, nuclear transport factor 2; structural genomics, structural genomics consortium, SGC, transport protein; 1.60A {Cryptosporidium parvum} SCOP: d.17.4.2
Probab=92.15 E-value=0.45 Score=35.48 Aligned_cols=81 Identities=15% Similarity=0.183 Sum_probs=59.5
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCC-CeEEEEEee----ecCCCc
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISS-DLQFVIDDI----SAEDSS 158 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~-dl~~~I~ev----~egD~~ 158 (179)
....+.|+.||..|+. |.+.|..+|.++..+... +..+.|+++|.+.+..+ |. +.++.|..+ ..+++.
T Consensus 13 ~v~~~Fv~~YY~~~d~-~r~~L~~~Y~~~S~ls~~--g~~~~G~~~I~~~l~~L----p~~~~~h~i~t~D~qp~~~~gi 85 (129)
T 1zo2_A 13 QIGKQFVQHYYQTFQT-NRPALGGLYGPQSMLTWE--DTQFQGQANIVNKFNSL----NFQRVQFEITRVDCQPSPNNGS 85 (129)
T ss_dssp HHHHHHHHHHHHHHHH-CGGGGGGGEEEEEEEEET--TEEEESHHHHHHHHHHH----CCSCEEEEEEEEEEEECTBSSE
T ss_pred HHHHHHHHHHHHHHhC-CHHHHHHhhCCCcEEEEC--CceeccHHHHHHHHHhC----CCcceEEEEEEEEEEEeCCCcE
Confidence 5677889999999987 688999999999888744 34689999999998875 32 356666553 233456
Q ss_pred eEEEEEEEEeCCc
Q 030319 159 ANGKESHFLSAKV 171 (179)
Q Consensus 159 aV~v~w~lew~~~ 171 (179)
.|.|...+..++.
T Consensus 86 lI~V~G~~~~~~~ 98 (129)
T 1zo2_A 86 IVFVTGDVRIDDG 98 (129)
T ss_dssp EEEEEEEEEETTC
T ss_pred EEEEEEEEEECCC
Confidence 6777777766553
No 95
>1idp_A Scytalone dehydratase; lyase, melanine biosynthesis; 1.45A {Magnaporthe grisea} SCOP: d.17.4.1 PDB: 2std_A* 1std_A* 3std_A* 6std_A* 4std_A* 5std_A* 7std_A*
Probab=91.81 E-value=0.069 Score=42.26 Aligned_cols=53 Identities=11% Similarity=0.105 Sum_probs=40.8
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCC---CccCHHHHHHHHHH
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPR---PFLGRKATLDFFKK 136 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~---Pi~Greav~~ff~~ 136 (179)
...+++.-+|..++..+|++.+.++|+||++..=..+.+ ...|++++.++++.
T Consensus 17 ~~I~~l~~rY~Ra~DtkDwd~lr~~fapd~~~Dy~~~~~~~~~~~~~d~~v~~~~~ 72 (172)
T 1idp_A 17 LGLMTCVYEWADSYDSKDWDRLRKVIAPTLRIDYRSFLDKLWEAMPAEEFVGMVSS 72 (172)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEECHHHHSCEEEEEEHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHhCCCEEEEcccccCcccccCCHHHHHHHHhh
Confidence 346778889999999999999999999999875111111 24578988888885
No 96
>1gy6_A Nuclear transport factor 2; 1.6A {Rattus norvegicus} SCOP: d.17.4.2 PDB: 1a2k_A 1oun_A 1ar0_A 1u5o_A 1ask_A 1gy5_A 1jb5_A 1jb4_A 1jb2_A 1qma_A
Probab=90.86 E-value=0.51 Score=35.07 Aligned_cols=80 Identities=11% Similarity=0.192 Sum_probs=57.8
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCC-CeEEEEEee----ecCCCc
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISS-DLQFVIDDI----SAEDSS 158 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~-dl~~~I~ev----~egD~~ 158 (179)
...++.|+.||..++. |.+.|..+|.++..+... +..+.|+++|.+.+..+ |. +.++.|..+ ..+++.
T Consensus 9 ~v~~~Fv~~YY~~~d~-~r~~L~~~Y~~~S~ls~~--g~~~~G~~~I~~~l~~L----p~~~~~h~i~t~d~qp~~~~~i 81 (127)
T 1gy6_A 9 QIGSSFIQHYYQLFDN-DRTQLGAIYIDASCLTWE--GQQFQGKAAIVEKLSSL----PFQKIQHSITAQDHQPTPDSCI 81 (127)
T ss_dssp HHHHHHHHHHHHHHHH-HGGGGGGGEEEEEEEEET--TEEEESHHHHHHHHHHC----SCSCEEEEEEEEEEEECTTSCE
T ss_pred HHHHHHHHHHHHHHhC-CHHHHHHhhCCCcEEEEC--CccccCHHHHHHHHHhC----CCcceEEEEEEEEEEEeCCCcE
Confidence 4567889999999987 688899999999888654 34689999999988764 43 366676553 233456
Q ss_pred eEEEEEEEEeCC
Q 030319 159 ANGKESHFLSAK 170 (179)
Q Consensus 159 aV~v~w~lew~~ 170 (179)
.|.|...+...+
T Consensus 82 li~V~G~~~~~~ 93 (127)
T 1gy6_A 82 ISMVVGQLKADE 93 (127)
T ss_dssp EEEEEEEEEETT
T ss_pred EEEEEEEEEECC
Confidence 666666666554
No 97
>3nv0_B NTF2-related export protein; NTF2-like domain, beta sheet heterodimer interface, nucleopo binding pocket, water mediated interface; 1.84A {Caenorhabditis elegans}
Probab=90.55 E-value=0.73 Score=35.71 Aligned_cols=80 Identities=10% Similarity=0.052 Sum_probs=58.3
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEee----ec-----
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDI----SA----- 154 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~ev----~e----- 154 (179)
....+.|+.||..++. |-+.|..+|.++..+... +.++.|+++|.+++..+ | ..+..|..+ ..
T Consensus 35 ~vg~~FV~qYY~~~d~-~R~~L~~fY~d~S~ls~~--g~~~~G~~~I~~~l~~L----p-~~~h~I~s~D~qp~~~~~~~ 106 (154)
T 3nv0_B 35 NESKKFMDVYYDVMDR-KREKIGFLYTQVSNAVWN--GNPINGYDSICEFMKAL----P-STQHDIQSLDAQRLPEGVTG 106 (154)
T ss_dssp HHHHHHHHHHHHHHHH-CGGGGGGGEEEEEEEEET--TEEEESHHHHHHHHHHS----C-CEEEEEEEEEEEECCTTCCG
T ss_pred HHHHHHHHHHHHHHhC-CHHHHHHHhcCCcEEEEC--CeecccHHHHHHHHHhC----C-CeEEEEEEEEEEEcCccccC
Confidence 4567889999999987 888999999999888643 34689999999988754 4 356666442 22
Q ss_pred --CCCceEEEEEEEEeCCc
Q 030319 155 --EDSSANGKESHFLSAKV 171 (179)
Q Consensus 155 --gD~~aV~v~w~lew~~~ 171 (179)
+++.-|.|...+...+.
T Consensus 107 q~~~~ilI~V~G~l~~~~~ 125 (154)
T 3nv0_B 107 DMSGGMLLNVAGAVTVDGD 125 (154)
T ss_dssp GGTTCEEEEEEEEEEETTS
T ss_pred CCCCeEEEEEEEEEEECCC
Confidence 23466777777777665
No 98
>1gy7_A Nuclear transport factor 2; protein transport; 1.6A {Saccharomyces cerevisiae} SCOP: d.17.4.2 PDB: 1gyb_A
Probab=89.98 E-value=0.76 Score=33.99 Aligned_cols=80 Identities=10% Similarity=0.110 Sum_probs=57.6
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcCC-CeEEEEEee----e-cCCCc
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISS-DLQFVIDDI----S-AEDSS 158 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp~-dl~~~I~ev----~-egD~~ 158 (179)
...+.|+.||..++. |.+.|..+|.++..+... +....|+++|.+.+..+ |. +.+..|..+ . .+++.
T Consensus 8 v~~~Fv~~YY~~~d~-~r~~L~~~Y~~~S~~s~~--g~~~~G~~~I~~~l~~L----p~~~~~h~i~t~D~qp~~~~~gi 80 (125)
T 1gy7_A 8 LAQNFTQFYYNQFDT-DRSQLGNLYRNESMLTFE--TSQLQGAKDIVEKLVSL----PFQKVQHRITTLDAQPASPYGDV 80 (125)
T ss_dssp HHHHHHHHHHHHHHH-HGGGGGGGEEEEEEEEET--TEEEESHHHHHHHHHHS----CCSCEEEEEEEEEEEESSTTSCE
T ss_pred HHHHHHHHHHHHHcC-CHHHHHHhhCCCcEEEEC--CcEecCHHHHHHHHHhC----CCcceEEEEEEEEEEEecCCCeE
Confidence 457789999999977 688899999999887643 34689999999988754 32 566776553 1 22456
Q ss_pred eEEEEEEEEeCCc
Q 030319 159 ANGKESHFLSAKV 171 (179)
Q Consensus 159 aV~v~w~lew~~~ 171 (179)
-|.|...+..+++
T Consensus 81 li~V~G~~~~~~~ 93 (125)
T 1gy7_A 81 LVMITGDLLIDEE 93 (125)
T ss_dssp EEEEEEEEEETTC
T ss_pred EEEEEEEEEECCC
Confidence 6677777766654
No 99
>1jkg_A P15; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_A
Probab=89.34 E-value=0.98 Score=33.98 Aligned_cols=51 Identities=12% Similarity=0.189 Sum_probs=41.5
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHH
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKF 137 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~ 137 (179)
....+.|+.||..++. |-+.|..+|.++..+... +.++.|+++|.+++..+
T Consensus 15 ~v~~~Fv~~YY~~~d~-~r~~L~~~Y~~~S~ls~~--g~~~~G~~~I~~~l~~L 65 (140)
T 1jkg_A 15 RAAEEFVNVYYTTMDK-RRRLLSRLYMGTATLVWN--GNAVSGQESLSEFFEML 65 (140)
T ss_dssp HHHHHHHHHHHHHHHH-CGGGGGGGEEEEEEEEET--TEEEESHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhC-CHHHHHHhcCCCcEEEEC--CeeecCHHHHHHHHHhC
Confidence 3467889999999987 788899999999887643 35689999999988744
No 100
>3gzx_B Biphenyl dioxygenase subunit beta; rieskie, non-heme iron, 2Fe-2S, aromatic hydroc catabolism, iron, iron-sulfur, metal-binding, NAD; HET: BNL MES; 1.58A {Comamonas testosteroni} SCOP: d.17.4.4 PDB: 3gzy_B* 2yfi_B 2xr8_B* 2xrx_B* 2xsh_B 2xso_B 2yfj_B* 2yfl_B*
Probab=89.12 E-value=2.8 Score=33.04 Aligned_cols=54 Identities=11% Similarity=-0.082 Sum_probs=39.3
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCC------------------ccCHHHHHHHHHHHH
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRP------------------FLGRKATLDFFKKFS 138 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~P------------------i~Greav~~ff~~~~ 138 (179)
...+.+-++..+++.+|++...+||+|||.|+-|..... ..|+..++.-..++.
T Consensus 24 ~i~~~l~~~a~llD~~~~~~w~~lft~D~~Y~~p~~~~~~~~d~~~~~~~~~~~~~~~d~r~~L~~RV~rl~ 95 (186)
T 3gzx_B 24 QVEQFYYREAQLLDHHAFQAWFALLAEDIHYWMPIRTVRTAREQGLEYVPAGANAHFDDTHATMYGRIRQKT 95 (186)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEEECBCCCCGGGGGGSBCCTTSCEEEEECHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcccCHHHHHHhCCCCEEEEEecCCCccccccccccCccccceeeeCCHHHHHHHHHHHh
Confidence 344556666668999999999999999999986654321 136777777776664
No 101
>2bmo_B Oxygenase-beta NBDO; nitrobenzene dioxygenase, nitroarene, rieske non-heme dioxygenase, substrate specificity iron- sulfur, metal-binding, NAD; 1.2A {Comamonas SP} SCOP: d.17.4.4 PDB: 2bmq_B 2bmr_B* 1o7n_B 1ndo_B 1o7g_B* 1o7h_B 1o7m_B 1eg9_B 1o7p_B* 1o7w_B 1uuv_B 1uuw_B 2hmj_B 2hmk_B* 2hml_B* 2hmm_B* 2hmn_B* 2hmo_B*
Probab=88.84 E-value=2.1 Score=34.00 Aligned_cols=34 Identities=12% Similarity=0.090 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhCCCHHHHHh-hhccCceEeeCC
Q 030319 86 GAVVVRRFYAGINGRDLASVEE-LIADDCVYEDLI 119 (179)
Q Consensus 86 ~~~vVrrfyeA~Na~D~dal~e-LfApD~v~~dp~ 119 (179)
..+++-+|-.+++.+|++...+ ||+|||+|+-|.
T Consensus 34 I~~fl~reA~lLD~~~~d~W~~~lfteD~~y~~p~ 68 (194)
T 2bmo_B 34 VTTLLTREAHLLDIQAYKAWLEHFVAPEIKYQVIS 68 (194)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcccCHHHHHHhhcCCCEEEEEec
Confidence 3445555557899999999999 999999997543
No 102
>3q90_A RAS GTPase-activating protein-binding protein 1; structural genomics, structural genomics consortium, SGC, NT (A+B proteins); 1.70A {Homo sapiens} SCOP: d.17.4.0
Probab=88.54 E-value=0.84 Score=34.47 Aligned_cols=84 Identities=12% Similarity=0.111 Sum_probs=57.3
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCC---C---CCccCHHHHHHHHHHHHHhcCCCeEEEEEee----e
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIF---P---RPFLGRKATLDFFKKFSDSISSDLQFVIDDI----S 153 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~---~---~Pi~Greav~~ff~~~~~afp~dl~~~I~ev----~ 153 (179)
....+-|+.||..++. |.+.|..+|.++..+.-... + ..+.|+++|.+.+..+- + .+.+..|..+ .
T Consensus 11 ~vg~~Fv~~YY~~ld~-~r~~L~~~Y~~~S~l~~~~~~~ng~~~~~~~G~~~I~~~l~~Lp--~-~~~~~~I~tvD~Qps 86 (140)
T 3q90_A 11 LVGREFVRQYYTLLNQ-APDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQN--F-TNCHTKIRHVDAHAT 86 (140)
T ss_dssp HHHHHHHHHHHHHHHH-CGGGGGGGEEEEEEEC----------CCCEEHHHHHHHHHHHTC--C-CSCEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhc-CHHHHHhhcccCceEEEEccCCCCceeecccCHHHHHHHHHhCC--C-ccceEEEEeEEEEEe
Confidence 4567889999999984 77789999999986642111 1 25789999999888651 2 1456666543 2
Q ss_pred cCCCceEEEEEEEEeCCc
Q 030319 154 AEDSSANGKESHFLSAKV 171 (179)
Q Consensus 154 egD~~aV~v~w~lew~~~ 171 (179)
.+++.-|.|...+.+++.
T Consensus 87 ~~~gilI~V~G~l~~~~~ 104 (140)
T 3q90_A 87 LNDGVVVQVMGLLSNNNQ 104 (140)
T ss_dssp GGGCEEEEEEEEEECTTC
T ss_pred CCCCEEEEEEEEEecCCC
Confidence 344577777777777664
No 103
>1vqq_A Saupbp2A, penicillin-binding protein MECA, low-affinity; beta-lactam, D- transpeptidase, D-carboxypeptidase, biosynthetic protein; 1.80A {Staphylococcus aureus} SCOP: d.17.4.5 d.175.1.1 e.3.1.1 PDB: 1mwu_A* 1mwr_A 1mws_A* 1mwt_A*
Probab=84.30 E-value=1.4 Score=41.12 Aligned_cols=76 Identities=9% Similarity=0.026 Sum_probs=48.8
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcC-CCeEEEEEeee--cCCCceEE
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSIS-SDLQFVIDDIS--AEDSSANG 161 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp-~dl~~~I~ev~--egD~~aV~ 161 (179)
++++.+++|+++|+++|++++.++.+++..- -..++++.+-++.+++++. .++++++..+. +++...+.
T Consensus 3 ~~~~~~~~f~~~~~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 74 (646)
T 1vqq_A 3 SKDKEINNTIDAIEDKNFKQVYKDSSYISKS--------DNGEVEMTERPIKIYNSLGVKDINIQDRKIKKVSKNKKRVD 74 (646)
T ss_dssp --CHHHHHHHHHHHTTCHHHHHHTBCHHHHH--------HHCHHHHHTHHHHHHHHHTCCCEEEEEEEEEEEETTEEEEE
T ss_pred ChHHHHHHHHHHHhcCCHHHHHHhhchhhhh--------cCCHHHHHHHHHHHHhhhccCCceEEeccccccCCCeEEEE
Confidence 3567899999999999999999988764211 1244566666666666553 46777777653 23323455
Q ss_pred EEEEEEe
Q 030319 162 KESHFLS 168 (179)
Q Consensus 162 v~w~lew 168 (179)
+++.++|
T Consensus 75 ~~~~~~~ 81 (646)
T 1vqq_A 75 AQYKIKT 81 (646)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 5555555
No 104
>1jkg_B TAP; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_B 1go5_A
Probab=76.35 E-value=2 Score=35.47 Aligned_cols=54 Identities=15% Similarity=0.185 Sum_probs=40.8
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEee-CCC-C-----------------------------CCccCHHHHHH
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYED-LIF-P-----------------------------RPFLGRKATLD 132 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~d-p~~-~-----------------------------~Pi~Greav~~ 132 (179)
...++.|+.||..|+.+|=..|..+|+++..+.- .+. + ...+|+++|.+
T Consensus 16 ~~~~~Fv~~Yy~~fD~~~R~~L~~lY~~~s~fS~~~~~~~~~~~~~~~~~Y~~~sRNl~~~~~~~~r~~~~~~G~~~I~~ 95 (250)
T 1jkg_B 16 SLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSIPFIPQNPARSSLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVA 95 (250)
T ss_dssp HHHHHHHHHHHHHHTSSCGGGGGGTEEEEEEEEEECCCC------CCCHHHHTTBCCTTTCCCHHHHHHHSEESHHHHHH
T ss_pred HHHHHHHHHHHHHHCcCcHHHHHHhhCcCcEEEEEeCCCCCCccccchhhhhhhccchhcccchhhhhhhhccCHHHHHH
Confidence 3456788889999998888889999999988752 111 1 13689999998
Q ss_pred HHHHH
Q 030319 133 FFKKF 137 (179)
Q Consensus 133 ff~~~ 137 (179)
+|..+
T Consensus 96 ~l~~L 100 (250)
T 1jkg_B 96 FLNEL 100 (250)
T ss_dssp HHTTS
T ss_pred HHHhC
Confidence 88754
No 105
>3k7c_A Putative NTF2-like transpeptidase; structural genomics, JOIN for structural genomics, JCSG, protein structure initiative unknown function; HET: PGE; 2.00A {Campylobacter jejuni}
Probab=56.95 E-value=56 Score=24.06 Aligned_cols=78 Identities=10% Similarity=0.047 Sum_probs=45.4
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHH-------HHHhcCCCeE-EEEEeeecCC
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKK-------FSDSISSDLQ-FVIDDISAED 156 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~-------~~~afp~dl~-~~I~ev~egD 156 (179)
++..++.+||+++-+||.+.+.++++=+-. ..+ ...+-+..-+.+ ..+..+ .++ +++. +...|
T Consensus 8 ~P~~~ak~F~~~l~~GD~e~av~~i~~p~~------~~~-~~~e~~~gki~m~~~~~~~~~ekkG-Gi~~I~~~-~~~~d 78 (114)
T 3k7c_A 8 NPEDLAKNFTKDLYSGDTKSVMSYIDLSEA------KSD-EEKTFVSDKITQVVAENAAKAKRMG-GVKDIQIE-EKTIN 78 (114)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHTBCCSSC------CSH-HHHHHHHHHHHHHHHHHHHHHHHTT-SEEEEEEE-EEEEC
T ss_pred ChHHHHHHHHHHHHcCCHHHHHhhccCCcc------cch-hHHHHHHHHHHHHHHHHHHHHHHcC-CcceEEEE-Eeecc
Confidence 588999999999999999999987542211 111 122223333332 222333 343 2222 23335
Q ss_pred CceEEEEEEEEeCCc
Q 030319 157 SSANGKESHFLSAKV 171 (179)
Q Consensus 157 ~~aV~v~w~lew~~~ 171 (179)
...+.|+.++.+++-
T Consensus 79 ~~~A~V~v~v~~knG 93 (114)
T 3k7c_A 79 KDSAKIRVLVLFNND 93 (114)
T ss_dssp SSEEEEEEEEEETTS
T ss_pred CCEEEEEEEEEECCC
Confidence 668888888877764
No 106
>4hyz_A Uncharacterized protein; PF13026 family protein, DUF3887, structural genomics, joint for structural genomics, JCSG; 2.25A {Ruminococcus gnavus}
Probab=54.57 E-value=56 Score=23.34 Aligned_cols=50 Identities=8% Similarity=-0.064 Sum_probs=38.8
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeCCCCCCccCHHHHHHHHHHHHHhcC
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSIS 142 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp~~~~Pi~Greav~~ff~~~~~afp 142 (179)
...++.++.+++.+|++|++.+.++++++..-+ + -.+.+. .|..+.+.++
T Consensus 14 ~~v~~~A~~~I~~l~~~dy~~i~~~~~~~lk~~---L-----t~e~l~-~~~~~~~~~G 63 (114)
T 4hyz_A 14 ETVRKQAMEDIEIAQSKDYESWKSRFTKDLQSS---L-----TEESYD-SYLKILEKQG 63 (114)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTBCHHHHTT---C-----CHHHHH-HHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHhCHHHHhh---C-----CHHHHH-HHHHHHHhcC
Confidence 356688999999999999999999999996622 2 346677 7777666654
No 107
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=51.57 E-value=34 Score=29.62 Aligned_cols=67 Identities=12% Similarity=0.062 Sum_probs=51.4
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhccCceEeeC-CCCCCccCHHHHHHHHHHHHHhcCCCeEEEEEe
Q 030319 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDL-IFPRPFLGRKATLDFFKKFSDSISSDLQFVIDD 151 (179)
Q Consensus 85 ~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~dp-~~~~Pi~Greav~~ff~~~~~afp~dl~~~I~e 151 (179)
...+..+++.++++.+|++....+..++.+..+| ..+.-+.|.+-.+-||......-....+.++-+
T Consensus 319 e~~~~~~~~l~~i~~gD~~~y~~l~~~~~t~fep~~~~~~~~g~~~~~f~~~~~~~~~~~~~~~~~~~ 386 (444)
T 3soa_A 319 EIIKVTEQLIEAISNGDFESYTKMCDPGMTAFEPEALGNLVEGLDFHRFYFENLWSRNSKPVHTTILN 386 (444)
T ss_dssp HHHHHHHHHHHHHHHTCSHHHHHHEEEEEEEECGGGTTCEEEHHHHTHHHHHHTSTTCSSCCEEEEEE
T ss_pred HHHHHHHHHHhhhhcCCchhhcccCCCCCCccCcccccccccCcchhhhhhhcccccCCCcceEeecC
Confidence 3456778888999999999999999999998777 566678999988888887543333345666655
No 108
>1of5_A MRNA export factor MEX67; nuclear protein, repeat, leucine- rich repeat, nuclear transport; 2.8A {Saccharomyces cerevisiae} SCOP: d.17.4.2
Probab=47.32 E-value=6.2 Score=32.31 Aligned_cols=33 Identities=6% Similarity=0.099 Sum_probs=27.4
Q ss_pred CCcHHHHHHHHHHHHhCCCHHHHHhhhccCceEe
Q 030319 83 DGGGAVVVRRFYAGINGRDLASVEELIADDCVYE 116 (179)
Q Consensus 83 ~~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~ 116 (179)
.....+.|..||..|+. |=..|..||.++..+.
T Consensus 11 ~~~~~~Fv~~Yy~~fDs-dR~~L~~lY~~~S~fS 43 (221)
T 1of5_A 11 GQSSTDFATNFLNLWDN-NREQLLNLYSPQSQFS 43 (221)
T ss_dssp CHHHHHHHHHHHHHHHH-CGGGGGGGEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHcc-CHHHHHHhhCcCcEEE
Confidence 35677899999999987 6788889999998873
No 109
>1q40_B MEX67, mRNA export factor MEX67; NTF2-fold, nuclear export, translation; 1.95A {Candida albicans} SCOP: d.17.4.2
Probab=38.11 E-value=17 Score=29.58 Aligned_cols=32 Identities=3% Similarity=0.099 Sum_probs=26.7
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhccCceEe
Q 030319 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYE 116 (179)
Q Consensus 84 ~~~~~vVrrfyeA~Na~D~dal~eLfApD~v~~ 116 (179)
....+.|..||..|+. |=..|..||.++..+.
T Consensus 15 ~~~~~Fl~~Yy~~fDs-dR~~L~~lY~~~S~fS 46 (219)
T 1q40_B 15 NLATNFIANYLKLWDA-NRSELMILYQNESQFS 46 (219)
T ss_dssp HHHHHHHHHHHHHHHS-CGGGGGGGCCTTCEEE
T ss_pred HHHHHHHHHHHHHHcc-CHHHHHHhhccccEEE
Confidence 4567889999999986 6788889999999874
No 110
>1q42_A MTR2, mRNA transport regulator MTR2; NTF2-fold, nuclear export, translation; 1.75A {Candida albicans} SCOP: d.17.4.2 PDB: 1q40_A
Probab=35.68 E-value=34 Score=27.81 Aligned_cols=53 Identities=9% Similarity=0.023 Sum_probs=38.4
Q ss_pred CCcHHHHHHHHHHHHhCC----------CHHHHHhhh----ccCceEeeCCCCCCc------cCHHHHHHHHHHH
Q 030319 83 DGGGAVVVRRFYAGINGR----------DLASVEELI----ADDCVYEDLIFPRPF------LGRKATLDFFKKF 137 (179)
Q Consensus 83 ~~~~~~vVrrfyeA~Na~----------D~dal~eLf----ApD~v~~dp~~~~Pi------~Greav~~ff~~~ 137 (179)
....++.++.||+.++.+ |++....+| .+.|.+-.- +.|+ .|++++.++|.++
T Consensus 26 ~r~aE~F~K~yyasLD~~r~~~~~~ql~~v~~f~~ly~~~l~~~a~liwN--Gnp~~~~~~~~gr~~fqk~w~~l 98 (201)
T 1q42_A 26 TQQLEPFLKRFLASLDLLYTQPTSQPFPNVESYATQLGSNLKRSSAIIVN--GQPIIPSPQEDCKLQFQKKWLQT 98 (201)
T ss_dssp GGTHHHHHHHHHHHHSCCCCCCTTCSSCCHHHHHTTTTTTEEEEEEEEET--TEECCCCSSCCHHHHHHHHHHTS
T ss_pred chhHHHHHHHHHHHhcccccccchhhccchhHHHHHhccccCCccEEEEc--CcccccccccccHHHHHHHHHhC
Confidence 467899999999999533 677888999 566665421 3344 7999888888763
No 111
>2cw9_A Translocase of inner mitochondrial membrane; structure genomics, TIM, structural genomics, NPPFSA, riken structural genomics/proteomics initiative; HET: 1PE; 1.90A {Homo sapiens} SCOP: d.17.4.13
Probab=31.90 E-value=18 Score=28.41 Aligned_cols=29 Identities=3% Similarity=0.028 Sum_probs=23.7
Q ss_pred HHHH-HHHHHHHHhCCCHHHHHhhhccCce
Q 030319 86 GAVV-VRRFYAGINGRDLASVEELIADDCV 114 (179)
Q Consensus 86 ~~~v-VrrfyeA~Na~D~dal~eLfApD~v 114 (179)
.++. .....+||.++|.+.|.++++|++.
T Consensus 61 ak~~iy~~Iq~A~~~gD~~~Lr~~~t~~~~ 90 (194)
T 2cw9_A 61 CENDIIPNVLEAMISGELDILKDWCYEATY 90 (194)
T ss_dssp HHHTHHHHHHHHHHHTCHHHHHHHBCHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhcCHHHH
Confidence 4454 4677789999999999999998864
Done!