Query 030325
Match_columns 179
No_of_seqs 200 out of 813
Neff 5.6
Searched_HMMs 46136
Date Fri Mar 29 12:01:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030325.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030325hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2183 Prolylcarboxypeptidase 100.0 1.7E-39 3.8E-44 291.2 12.3 119 52-178 42-174 (492)
2 PF05577 Peptidase_S28: Serine 100.0 1.7E-38 3.6E-43 284.4 7.7 109 62-178 1-120 (434)
3 KOG2182 Hydrolytic enzymes of 100.0 9.1E-35 2E-39 265.0 11.6 131 40-178 35-179 (514)
4 PF05576 Peptidase_S37: PS-10 99.7 3.4E-16 7.3E-21 141.5 10.4 104 55-178 31-141 (448)
5 PLN02385 hydrolase; alpha/beta 83.6 13 0.00027 32.2 9.8 77 98-177 87-168 (349)
6 TIGR01840 esterase_phb esteras 82.8 3.7 8E-05 33.1 5.8 79 97-177 12-101 (212)
7 PHA02857 monoglyceride lipase; 81.6 7.9 0.00017 31.7 7.4 74 98-177 25-103 (276)
8 TIGR02427 protocat_pcaD 3-oxoa 81.2 5.1 0.00011 30.8 5.8 44 97-144 12-55 (251)
9 PLN02298 hydrolase, alpha/beta 81.0 7.2 0.00016 33.2 7.2 78 98-178 59-141 (330)
10 PF07859 Abhydrolase_3: alpha/ 80.4 4.3 9.3E-05 32.0 5.3 73 101-178 2-78 (211)
11 PRK10566 esterase; Provisional 79.0 7.1 0.00015 31.5 6.2 77 97-177 26-113 (249)
12 TIGR01250 pro_imino_pep_2 prol 78.3 7.8 0.00017 30.7 6.2 45 97-144 25-69 (288)
13 TIGR03100 hydr1_PEP hydrolase, 77.6 12 0.00026 31.4 7.5 75 98-177 27-106 (274)
14 TIGR03695 menH_SHCHC 2-succiny 76.2 14 0.0003 28.2 6.9 47 128-177 27-76 (251)
15 PRK00870 haloalkane dehalogena 74.5 20 0.00042 30.1 7.9 47 128-177 73-121 (302)
16 TIGR03611 RutD pyrimidine util 74.3 12 0.00026 29.2 6.2 47 128-177 39-86 (257)
17 PF12146 Hydrolase_4: Putative 71.6 8.8 0.00019 26.9 4.3 65 85-158 6-78 (79)
18 KOG4391 Predicted alpha/beta h 71.6 19 0.0004 31.5 7.0 78 97-178 77-156 (300)
19 TIGR03056 bchO_mg_che_rel puta 71.1 10 0.00022 30.5 5.2 74 97-177 27-101 (278)
20 TIGR01249 pro_imino_pep_1 prol 70.9 13 0.00028 31.5 6.0 73 97-177 27-101 (306)
21 COG0657 Aes Esterase/lipase [L 69.2 22 0.00049 30.2 7.2 79 97-177 78-158 (312)
22 PF12695 Abhydrolase_5: Alpha/ 69.0 5 0.00011 29.2 2.7 51 119-178 18-68 (145)
23 PRK10749 lysophospholipase L2; 68.6 21 0.00046 30.7 6.9 72 97-177 53-137 (330)
24 KOG1552 Predicted alpha/beta h 68.1 18 0.00038 31.6 6.3 76 98-178 60-137 (258)
25 PLN02511 hydrolase 68.0 21 0.00045 31.9 7.0 76 97-177 99-179 (388)
26 PLN02652 hydrolase; alpha/beta 67.9 14 0.00031 33.4 5.9 71 98-177 136-214 (395)
27 PF07172 GRP: Glycine rich pro 67.4 5.4 0.00012 29.5 2.6 25 1-25 1-25 (95)
28 PRK10673 acyl-CoA esterase; Pr 67.1 19 0.00041 28.7 6.0 46 97-147 16-61 (255)
29 PRK10162 acetyl esterase; Prov 66.8 33 0.00073 29.6 7.9 77 97-178 80-161 (318)
30 TIGR03502 lipase_Pla1_cef extr 63.3 24 0.00051 35.4 6.9 76 97-178 448-562 (792)
31 KOG2564 Predicted acetyltransf 58.4 76 0.0017 28.6 8.5 105 58-178 45-153 (343)
32 PF03403 PAF-AH_p_II: Platelet 58.2 9.5 0.00021 34.5 3.0 40 97-139 99-138 (379)
33 PLN02211 methyl indole-3-aceta 57.3 50 0.0011 27.7 7.1 77 96-177 16-93 (273)
34 PF12697 Abhydrolase_6: Alpha/ 55.7 44 0.00096 24.9 5.9 54 119-177 17-72 (228)
35 PRK11126 2-succinyl-6-hydroxy- 54.3 61 0.0013 25.6 6.8 45 128-177 27-72 (242)
36 PF05677 DUF818: Chlamydia CHL 54.0 49 0.0011 30.3 6.7 81 97-177 137-221 (365)
37 PF09752 DUF2048: Uncharacteri 46.6 55 0.0012 29.8 5.8 87 52-146 50-139 (348)
38 PF10503 Esterase_phd: Esteras 46.0 54 0.0012 27.5 5.5 79 97-177 15-103 (220)
39 TIGR02240 PHA_depoly_arom poly 44.8 94 0.002 25.5 6.7 71 98-177 26-97 (276)
40 TIGR01607 PST-A Plasmodium sub 42.7 1.1E+02 0.0023 26.7 7.0 37 127-163 73-117 (332)
41 PRK03592 haloalkane dehalogena 40.1 66 0.0014 26.6 5.1 72 97-177 27-99 (295)
42 PRK05077 frsA fermentation/res 39.9 1.1E+02 0.0023 27.9 6.7 46 97-145 193-239 (414)
43 PLN03016 sinapoylglucose-malat 38.7 3.2E+02 0.0069 25.2 10.3 50 128-178 115-172 (433)
44 PLN02679 hydrolase, alpha/beta 38.4 86 0.0019 27.4 5.8 44 98-145 88-131 (360)
45 PRK14875 acetoin dehydrogenase 38.3 96 0.0021 26.3 6.0 45 129-177 158-203 (371)
46 TIGR02821 fghA_ester_D S-formy 38.0 2.4E+02 0.0052 23.5 9.1 40 97-136 41-80 (275)
47 PRK10985 putative hydrolase; P 36.3 1.2E+02 0.0026 26.0 6.3 76 97-177 57-137 (324)
48 TIGR03343 biphenyl_bphD 2-hydr 35.3 1.2E+02 0.0026 24.4 5.9 48 127-177 59-107 (282)
49 TIGR03101 hydr2_PEP hydrolase, 34.6 1.9E+02 0.0041 24.8 7.2 73 98-177 25-105 (266)
50 TIGR00976 /NonD putative hydro 32.7 1.3E+02 0.0028 28.2 6.2 79 97-178 21-104 (550)
51 PLN02824 hydrolase, alpha/beta 31.8 1.3E+02 0.0029 24.7 5.7 44 98-145 29-72 (294)
52 PF00975 Thioesterase: Thioest 31.7 1.5E+02 0.0032 23.3 5.8 68 98-177 1-72 (229)
53 cd00312 Esterase_lipase Estera 30.0 2.1E+02 0.0047 25.8 7.1 80 96-177 93-182 (493)
54 PLN02980 2-oxoglutarate decarb 27.4 2.3E+02 0.0051 30.7 7.7 57 80-144 1357-1413(1655)
55 PF08538 DUF1749: Protein of u 26.5 2.3E+02 0.0051 25.2 6.5 76 98-178 33-115 (303)
56 PRK05855 short chain dehydroge 25.7 86 0.0019 28.4 3.7 61 97-161 24-90 (582)
57 PRK10301 hypothetical protein; 25.3 1.5E+02 0.0033 22.6 4.5 11 55-65 47-57 (124)
58 PLN02209 serine carboxypeptida 24.7 5.6E+02 0.012 23.7 11.4 51 128-178 117-174 (437)
59 PLN02894 hydrolase, alpha/beta 24.0 2.7E+02 0.0058 25.0 6.5 43 97-143 104-146 (402)
60 PRK03204 haloalkane dehalogena 22.9 1.9E+02 0.0042 24.1 5.1 46 129-177 61-107 (286)
61 KOG1515 Arylacetamide deacetyl 22.5 81 0.0018 28.3 2.8 42 97-138 89-133 (336)
62 PRK08775 homoserine O-acetyltr 21.0 1.6E+02 0.0036 25.2 4.4 49 97-145 57-116 (343)
63 COG2267 PldB Lysophospholipase 20.9 3.3E+02 0.0071 23.5 6.3 49 126-177 59-113 (298)
No 1
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=100.00 E-value=1.7e-39 Score=291.17 Aligned_cols=119 Identities=29% Similarity=0.470 Sum_probs=110.5
Q ss_pred CCCceeeEEEeecCCCCCCCCCCCceEEEEEEeccccCCCCCCCCCCCEEEEeCCCCcccccccccchHHHHHHhcCCcE
Q 030325 52 SKDFQTFYYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALL 131 (179)
Q Consensus 52 ~~~~~~~~f~Q~lDHF~~~~~~~~TF~QRY~vn~~~~~~~~~~~~ggPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~l 131 (179)
+.+++++||.|+||||+|. ++.||+|||++|++||+++ +||||+|+|+||+++++..|+|||+|+|+++||+|
T Consensus 42 ~~~ye~~yf~q~LDHFsF~--~~~tF~qRylin~~fw~~g-----~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~All 114 (492)
T KOG2183|consen 42 EYNYETRYFQQPLDHFSFT--DNKTFDQRYLINDDFWKKG-----EGPIFFYTGNEGDIEWFANNTGFMWDLAPELKALL 114 (492)
T ss_pred cccceeEEeeccccccccc--CccceeeEEEEecccccCC-----CCceEEEeCCcccHHHHHhccchHHhhhHhhCceE
Confidence 6789999999999999986 7899999999999999872 49999999999999999999999999999999999
Q ss_pred EEEeeeeeecccccCC-------------hhHHHhc-hHHHHHHHHHhCCCCCCcEEEecc
Q 030325 132 VYIEILWEINSIWVKK-------------RSLEKRK-HSWLFQLCTSYNRLCRNSLVYKGK 178 (179)
Q Consensus 132 v~lEHRyYG~S~P~~~-------------~~qal~D-a~fi~~~~~~~~~~~~~~wI~~G~ 178 (179)
|++||||||||+||++ .+|||+| |..|+++|++.. ...+++|++|-
T Consensus 115 VFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~-a~~~pvIafGG 174 (492)
T KOG2183|consen 115 VFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLS-AEASPVIAFGG 174 (492)
T ss_pred EEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccc-cccCcEEEecC
Confidence 9999999999999997 3899999 999999999954 45679999983
No 2
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=100.00 E-value=1.7e-38 Score=284.43 Aligned_cols=109 Identities=29% Similarity=0.414 Sum_probs=87.8
Q ss_pred eecCCCCCCCCCCCceEEEEEEeccccCCCCCCCCCCCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEEeeeeeec
Q 030325 62 QTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEILWEIN 141 (179)
Q Consensus 62 Q~lDHF~~~~~~~~TF~QRY~vn~~~~~~~~~~~~ggPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~ 141 (179)
|+||||| +++.+||+||||+|++||++ +||||||+|||++++..+...|++.++|+++||++|++||||||+
T Consensus 1 Q~lDHf~--~~~~~tf~qRY~~n~~~~~~------~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~ 72 (434)
T PF05577_consen 1 QPLDHFN--PSNNGTFSQRYWVNDQYYKP------GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGK 72 (434)
T ss_dssp EES-SS---SSTT-EEEEEEEEE-TT--T------TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTT
T ss_pred CCCCCCC--CCCCCeEEEEEEEEhhhcCC------CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcC
Confidence 8999999 77899999999999999987 699999999999999988888999999999999999999999999
Q ss_pred ccccCCh----------hHHHhc-hHHHHHHHHHhCCCCCCcEEEecc
Q 030325 142 SIWVKKR----------SLEKRK-HSWLFQLCTSYNRLCRNSLVYKGK 178 (179)
Q Consensus 142 S~P~~~~----------~qal~D-a~fi~~~~~~~~~~~~~~wI~~G~ 178 (179)
|+|++++ +|||+| ++|+.+++.++...+++|||++|-
T Consensus 73 S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~Gg 120 (434)
T PF05577_consen 73 SQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGG 120 (434)
T ss_dssp B-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEE
T ss_pred CCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECC
Confidence 9999873 899999 999999999887777889999983
No 3
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=100.00 E-value=9.1e-35 Score=265.01 Aligned_cols=131 Identities=20% Similarity=0.259 Sum_probs=108.5
Q ss_pred cccCCcc-cccccCCCceeeEEEeecCCCCCCCCCCCceEEEEEEeccccCCCCCCCCCCCEEEEeCCCCccccccc--c
Q 030325 40 ILQNPEI-LSATISKDFQTFYYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYLGAEESLDGDIS--V 116 (179)
Q Consensus 40 ~~~~p~~-~~~~~~~~~~~~~f~Q~lDHF~~~~~~~~TF~QRY~vn~~~~~~~~~~~~ggPIfly~GgE~~~~~~~~--~ 116 (179)
++++++. ......+++++.||+|++|||+ ++++.|.||||++.++|.. ++||||||+||||+++..|+ .
T Consensus 35 ~~~g~~~~~~~~~~~~~~~~~~~Q~lDhF~---~~~~~~~Qq~~y~n~~~~~-----~~gPiFLmIGGEgp~~~~wv~~~ 106 (514)
T KOG2182|consen 35 LLKGPPLELPTTSPANVEQSTFTQKLDHFD---SSNGKFFQQRFYNNNQWAK-----PGGPIFLMIGGEGPESDKWVGNE 106 (514)
T ss_pred ccCCCCccccccccccccccchhhhhhhhh---cchhhhhhhheeecccccc-----CCCceEEEEcCCCCCCCCccccC
Confidence 4555443 2233368899999999999997 4667777777777777732 48999999999999997663 4
Q ss_pred cchHHHHHHhcCCcEEEEeeeeeecccccCCh----------hHHHhc-hHHHHHHHHHhCCCCCCcEEEecc
Q 030325 117 IGFLTDNAARFNALLVYIEILWEINSIWVKKR----------SLEKRK-HSWLFQLCTSYNRLCRNSLVYKGK 178 (179)
Q Consensus 117 ~g~~~~lA~~~~A~lv~lEHRyYG~S~P~~~~----------~qal~D-a~fi~~~~~~~~~~~~~~wI~~G~ 178 (179)
.+.+.++|++|||.|+.+||||||+|.|++++ .|||+| |+||.+++.+++..+++|||++|-
T Consensus 107 ~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGg 179 (514)
T KOG2182|consen 107 NLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGG 179 (514)
T ss_pred cchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECC
Confidence 45789999999999999999999999999873 899999 999999999999877789999994
No 4
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=99.66 E-value=3.4e-16 Score=141.51 Aligned_cols=104 Identities=18% Similarity=0.175 Sum_probs=87.0
Q ss_pred ceeeEEEeecCCCCCCCCCCCceEEEEEEeccccCCCCCCCCCCCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEE
Q 030325 55 FQTFYYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYI 134 (179)
Q Consensus 55 ~~~~~f~Q~lDHF~~~~~~~~TF~QRY~vn~~~~~~~~~~~~ggPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~l 134 (179)
+-..+|+||+||.+ | +.+||+||..+.++-. ..|.++++.|.+-.. +....++++-++|+.|.+
T Consensus 31 ffvl~y~QPvDH~~--P-~~gtF~QRvtLlHk~~--------drPtV~~T~GY~~~~-----~p~r~Ept~Lld~NQl~v 94 (448)
T PF05576_consen 31 FFVLRYTQPVDHRH--P-EKGTFQQRVTLLHKDF--------DRPTVLYTEGYNVST-----SPRRSEPTQLLDGNQLSV 94 (448)
T ss_pred EEEEeeecCCCCCC--C-CCCceEEEEEEEEcCC--------CCCeEEEecCccccc-----CccccchhHhhccceEEE
Confidence 45568999999999 6 7899999999998654 689999999987632 123459999999999999
Q ss_pred eeeeeecccccCC------hhHHHhc-hHHHHHHHHHhCCCCCCcEEEecc
Q 030325 135 EILWEINSIWVKK------RSLEKRK-HSWLFQLCTSYNRLCRNSLVYKGK 178 (179)
Q Consensus 135 EHRyYG~S~P~~~------~~qal~D-a~fi~~~~~~~~~~~~~~wI~~G~ 178 (179)
||||||+|+|-+. ++||..| +..++.+|..|. .|||++|-
T Consensus 95 EhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~----~kWISTG~ 141 (448)
T PF05576_consen 95 EHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYP----GKWISTGG 141 (448)
T ss_pred EEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhcc----CCceecCc
Confidence 9999999999753 5999999 888888888883 48999983
No 5
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=83.58 E-value=13 Score=32.24 Aligned_cols=77 Identities=5% Similarity=-0.243 Sum_probs=42.3
Q ss_pred CCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEEeeeeeeccccc-C---ChhHHHhc-hHHHHHHHHHhCCCCCCc
Q 030325 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEILWEINSIWV-K---KRSLEKRK-HSWLFQLCTSYNRLCRNS 172 (179)
Q Consensus 98 gPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~-~---~~~qal~D-a~fi~~~~~~~~~~~~~~ 172 (179)
.|+++++-|=+.-...+ -..+...+++ .|-.++++.+|-+|+|... + +.+.-..| ..++..++..... ...+
T Consensus 87 ~~~iv~lHG~~~~~~~~-~~~~~~~l~~-~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~-~~~~ 163 (349)
T PLN02385 87 KAAVCFCHGYGDTCTFF-FEGIARKIAS-SGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEF-RGLP 163 (349)
T ss_pred CeEEEEECCCCCccchH-HHHHHHHHHh-CCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhcccc-CCCC
Confidence 45666666643321110 0112233433 3678999999999999632 2 44555566 6666666543222 2346
Q ss_pred EEEec
Q 030325 173 LVYKG 177 (179)
Q Consensus 173 wI~~G 177 (179)
.+.+|
T Consensus 164 ~~LvG 168 (349)
T PLN02385 164 SFLFG 168 (349)
T ss_pred EEEEE
Confidence 77777
No 6
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=82.83 E-value=3.7 Score=33.06 Aligned_cols=79 Identities=16% Similarity=0.042 Sum_probs=49.0
Q ss_pred CCCEEEEeCCCCccccccc-ccchHHHHHHhcCCcEEEEeeeeeeccccc----CC-----hhHHHhc-hHHHHHHHHHh
Q 030325 97 NAPIFVYLGAEESLDGDIS-VIGFLTDNAARFNALLVYIEILWEINSIWV----KK-----RSLEKRK-HSWLFQLCTSY 165 (179)
Q Consensus 97 ggPIfly~GgE~~~~~~~~-~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~----~~-----~~qal~D-a~fi~~~~~~~ 165 (179)
..|+++++-|-+.-..... ..+ +..+|.+.|..+|+.+.|-+|.+... .. ......| ..++.++++.+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~-~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 90 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWG-WKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANY 90 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcC-hHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhc
Confidence 5788888877553322221 122 56788999999999999887654321 00 1223445 56778888877
Q ss_pred CCCCCCcEEEec
Q 030325 166 NRLCRNSLVYKG 177 (179)
Q Consensus 166 ~~~~~~~wI~~G 177 (179)
.... .+.+..|
T Consensus 91 ~id~-~~i~l~G 101 (212)
T TIGR01840 91 SIDP-NRVYVTG 101 (212)
T ss_pred CcCh-hheEEEE
Confidence 6533 4777766
No 7
>PHA02857 monoglyceride lipase; Provisional
Probab=81.61 E-value=7.9 Score=31.74 Aligned_cols=74 Identities=9% Similarity=0.039 Sum_probs=41.8
Q ss_pred CCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEEeeeeeecccccC----ChhHHHhc-hHHHHHHHHHhCCCCCCc
Q 030325 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEILWEINSIWVK----KRSLEKRK-HSWLFQLCTSYNRLCRNS 172 (179)
Q Consensus 98 gPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~~----~~~qal~D-a~fi~~~~~~~~~~~~~~ 172 (179)
.|+++++-|-+.-...+ .-+...+++ .|-.++++.+|=+|.|.+.. +...-+.| ...+..+++.+ ...+
T Consensus 25 ~~~v~llHG~~~~~~~~--~~~~~~l~~-~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~---~~~~ 98 (276)
T PHA02857 25 KALVFISHGAGEHSGRY--EELAENISS-LGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTY---PGVP 98 (276)
T ss_pred CEEEEEeCCCccccchH--HHHHHHHHh-CCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhC---CCCC
Confidence 56777766643321111 112233333 26789999999999997532 23444555 55555555443 2356
Q ss_pred EEEec
Q 030325 173 LVYKG 177 (179)
Q Consensus 173 wI~~G 177 (179)
.+.+|
T Consensus 99 ~~lvG 103 (276)
T PHA02857 99 VFLLG 103 (276)
T ss_pred EEEEE
Confidence 77776
No 8
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=81.18 E-value=5.1 Score=30.84 Aligned_cols=44 Identities=11% Similarity=-0.075 Sum_probs=27.7
Q ss_pred CCCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEEeeeeeecccc
Q 030325 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEILWEINSIW 144 (179)
Q Consensus 97 ggPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P 144 (179)
+.|+++++.|=+.-...+ ..+...+++ +-.++.+++|-+|+|.+
T Consensus 12 ~~~~li~~hg~~~~~~~~--~~~~~~l~~--~~~v~~~d~~G~G~s~~ 55 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMW--DPVLPALTP--DFRVLRYDKRGHGLSDA 55 (251)
T ss_pred CCCeEEEEcCcccchhhH--HHHHHHhhc--ccEEEEecCCCCCCCCC
Confidence 678888887754332222 122333332 56899999999999954
No 9
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=81.00 E-value=7.2 Score=33.24 Aligned_cols=78 Identities=6% Similarity=-0.132 Sum_probs=47.1
Q ss_pred CCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEEeeeeeeccccc----CChhHHHhc-hHHHHHHHHHhCCCCCCc
Q 030325 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEILWEINSIWV----KKRSLEKRK-HSWLFQLCTSYNRLCRNS 172 (179)
Q Consensus 98 gPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~----~~~~qal~D-a~fi~~~~~~~~~~~~~~ 172 (179)
.|+++++-|=+.-. .+....+...+++ .|-.|+++.+|=||+|... .+.+....| ..++.+++...... +.+
T Consensus 59 ~~~VvllHG~~~~~-~~~~~~~~~~L~~-~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~-~~~ 135 (330)
T PLN02298 59 RALIFMVHGYGNDI-SWTFQSTAIFLAQ-MGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQ-GLP 135 (330)
T ss_pred ceEEEEEcCCCCCc-ceehhHHHHHHHh-CCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCC-CCC
Confidence 45666666554211 1111112233443 4778999999999999632 245667788 88888887654332 346
Q ss_pred EEEecc
Q 030325 173 LVYKGK 178 (179)
Q Consensus 173 wI~~G~ 178 (179)
.+.+|.
T Consensus 136 i~l~Gh 141 (330)
T PLN02298 136 RFLYGE 141 (330)
T ss_pred EEEEEe
Confidence 788773
No 10
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=80.42 E-value=4.3 Score=31.98 Aligned_cols=73 Identities=14% Similarity=-0.023 Sum_probs=43.3
Q ss_pred EEEeCCCCcccccccccchHHHHHHhcCCcEEEEeeeeeecccccCChhHHHhc-hHHHHHHHHH---hCCCCCCcEEEe
Q 030325 101 FVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEILWEINSIWVKKRSLEKRK-HSWLFQLCTS---YNRLCRNSLVYK 176 (179)
Q Consensus 101 fly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~~~~~qal~D-a~fi~~~~~~---~~~~~~~~wI~~ 176 (179)
|.+=||=+-.........+...+|.+.|..++.+++|-. |-....+++.| ...+..+.+. ++.+ ..++++.
T Consensus 2 ~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~----p~~~~p~~~~D~~~a~~~l~~~~~~~~~d-~~~i~l~ 76 (211)
T PF07859_consen 2 VYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA----PEAPFPAALEDVKAAYRWLLKNADKLGID-PERIVLI 76 (211)
T ss_dssp EEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T----TTSSTTHHHHHHHHHHHHHHHTHHHHTEE-EEEEEEE
T ss_pred EEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc----ccccccccccccccceeeecccccccccc-ccceEEe
Confidence 444454443322222234567899999999999999975 43345588888 7777777664 4443 3478888
Q ss_pred cc
Q 030325 177 GK 178 (179)
Q Consensus 177 G~ 178 (179)
|.
T Consensus 77 G~ 78 (211)
T PF07859_consen 77 GD 78 (211)
T ss_dssp EE
T ss_pred ec
Confidence 73
No 11
>PRK10566 esterase; Provisional
Probab=79.01 E-value=7.1 Score=31.49 Aligned_cols=77 Identities=8% Similarity=-0.126 Sum_probs=42.6
Q ss_pred CCCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEEeeeeeecccccC----------ChhHHHhc-hHHHHHHHHHh
Q 030325 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEILWEINSIWVK----------KRSLEKRK-HSWLFQLCTSY 165 (179)
Q Consensus 97 ggPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~~----------~~~qal~D-a~fi~~~~~~~ 165 (179)
..|+++++-|-+.-...+ .-+...+++ .|-.++++++|.+|.|.+-. ++.+++.| +..+..+.+..
T Consensus 26 ~~p~vv~~HG~~~~~~~~--~~~~~~l~~-~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 102 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVY--SYFAVALAQ-AGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEG 102 (249)
T ss_pred CCCEEEEeCCCCcccchH--HHHHHHHHh-CCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 468888888753321111 112223333 37789999999999863211 11345566 55666665542
Q ss_pred CCCCCCcEEEec
Q 030325 166 NRLCRNSLVYKG 177 (179)
Q Consensus 166 ~~~~~~~wI~~G 177 (179)
.. +..+.+++|
T Consensus 103 ~~-~~~~i~v~G 113 (249)
T PRK10566 103 WL-LDDRLAVGG 113 (249)
T ss_pred Cc-CccceeEEe
Confidence 22 334677776
No 12
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=78.28 E-value=7.8 Score=30.68 Aligned_cols=45 Identities=9% Similarity=-0.078 Sum_probs=29.9
Q ss_pred CCCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEEeeeeeecccc
Q 030325 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEILWEINSIW 144 (179)
Q Consensus 97 ggPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P 144 (179)
+.||+++-|+-+.....+ ..+..+.++.|-.+|.+++|-+|+|..
T Consensus 25 ~~~vl~~hG~~g~~~~~~---~~~~~~l~~~g~~vi~~d~~G~G~s~~ 69 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYL---ENLRELLKEEGREVIMYDQLGCGYSDQ 69 (288)
T ss_pred CCeEEEEcCCCCccHHHH---HHHHHHHHhcCCEEEEEcCCCCCCCCC
Confidence 457877777644322221 234455555578899999999999974
No 13
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=77.62 E-value=12 Score=31.45 Aligned_cols=75 Identities=9% Similarity=-0.101 Sum_probs=46.0
Q ss_pred CCEEEEeCCCCcccccccccchHHHHHHh---cCCcEEEEeeeeeeccccc-CChhHHHhc-hHHHHHHHHHhCCCCCCc
Q 030325 98 APIFVYLGAEESLDGDISVIGFLTDNAAR---FNALLVYIEILWEINSIWV-KKRSLEKRK-HSWLFQLCTSYNRLCRNS 172 (179)
Q Consensus 98 gPIfly~GgE~~~~~~~~~~g~~~~lA~~---~~A~lv~lEHRyYG~S~P~-~~~~qal~D-a~fi~~~~~~~~~~~~~~ 172 (179)
.+|+++.||-+...+.. ..+..+|+. .|-.++.+..|-+|+|.+. .+.++...| ...+..+++... .-.+
T Consensus 27 ~~vv~i~gg~~~~~g~~---~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~~~~~~~~d~~~~~~~l~~~~~--g~~~ 101 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSH---RQFVLLARRLAEAGFPVLRFDYRGMGDSEGENLGFEGIDADIAAAIDAFREAAP--HLRR 101 (274)
T ss_pred CeEEEEeCCccccCCch---hHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhCC--CCCc
Confidence 46777777553322211 122344443 4678999999999999754 455666778 777887776542 1135
Q ss_pred EEEec
Q 030325 173 LVYKG 177 (179)
Q Consensus 173 wI~~G 177 (179)
.+.+|
T Consensus 102 i~l~G 106 (274)
T TIGR03100 102 IVAWG 106 (274)
T ss_pred EEEEE
Confidence 66666
No 14
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=76.25 E-value=14 Score=28.23 Aligned_cols=47 Identities=11% Similarity=-0.030 Sum_probs=27.5
Q ss_pred CCcEEEEeeeeeecccccCC-hhHHHhc-hHH-HHHHHHHhCCCCCCcEEEec
Q 030325 128 NALLVYIEILWEINSIWVKK-RSLEKRK-HSW-LFQLCTSYNRLCRNSLVYKG 177 (179)
Q Consensus 128 ~A~lv~lEHRyYG~S~P~~~-~~qal~D-a~f-i~~~~~~~~~~~~~~wI~~G 177 (179)
+..++.+++|.+|.|..... ....+++ +.- +..+.+.. ...+.+.+|
T Consensus 27 ~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~G 76 (251)
T TIGR03695 27 HFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL---GIEPFFLVG 76 (251)
T ss_pred cCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc---CCCeEEEEE
Confidence 67899999999999953221 2233334 333 44454443 234676666
No 15
>PRK00870 haloalkane dehalogenase; Provisional
Probab=74.52 E-value=20 Score=30.06 Aligned_cols=47 Identities=4% Similarity=0.005 Sum_probs=27.0
Q ss_pred CCcEEEEeeeeeecccccCC-hhHHHhc-hHHHHHHHHHhCCCCCCcEEEec
Q 030325 128 NALLVYIEILWEINSIWVKK-RSLEKRK-HSWLFQLCTSYNRLCRNSLVYKG 177 (179)
Q Consensus 128 ~A~lv~lEHRyYG~S~P~~~-~~qal~D-a~fi~~~~~~~~~~~~~~wI~~G 177 (179)
+-.+|++.+|-||+|.+.+. ....+.+ +..+..+.+..+. .+.+.+|
T Consensus 73 gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~---~~v~lvG 121 (302)
T PRK00870 73 GHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDL---TDVTLVC 121 (302)
T ss_pred CCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCC---CCEEEEE
Confidence 56799999999999975432 1122334 4445444443322 2455554
No 16
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=74.33 E-value=12 Score=29.19 Aligned_cols=47 Identities=13% Similarity=-0.040 Sum_probs=26.2
Q ss_pred CCcEEEEeeeeeecccccCChhHHHhc-hHHHHHHHHHhCCCCCCcEEEec
Q 030325 128 NALLVYIEILWEINSIWVKKRSLEKRK-HSWLFQLCTSYNRLCRNSLVYKG 177 (179)
Q Consensus 128 ~A~lv~lEHRyYG~S~P~~~~~qal~D-a~fi~~~~~~~~~~~~~~wI~~G 177 (179)
+-.++++++|-+|.|..-......+.| +..+..+.+..+ ..+++.+|
T Consensus 39 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~l~G 86 (257)
T TIGR03611 39 RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALN---IERFHFVG 86 (257)
T ss_pred ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhC---CCcEEEEE
Confidence 578999999999999632221122333 333333333332 23577666
No 17
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=71.59 E-value=8.8 Score=26.92 Aligned_cols=65 Identities=9% Similarity=-0.007 Sum_probs=38.9
Q ss_pred ccccCCCCCCCCCCCEEEEeCCCCcccccccccchHHHHHHh---cCCcEEEEeeeeeeccccc----CChhHHHhc-hH
Q 030325 85 FKYWGGGAGADANAPIFVYLGAEESLDGDISVIGFLTDNAAR---FNALLVYIEILWEINSIWV----KKRSLEKRK-HS 156 (179)
Q Consensus 85 ~~~~~~~~~~~~ggPIfly~GgE~~~~~~~~~~g~~~~lA~~---~~A~lv~lEHRyYG~S~P~----~~~~qal~D-a~ 156 (179)
...|.+ +++...+++++-|-++- .+.+.++|+. .|-.++...||=.|+|-.- ++.++-+.| ..
T Consensus 6 ~~~w~p---~~~~k~~v~i~HG~~eh------~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~ 76 (79)
T PF12146_consen 6 YRRWKP---ENPPKAVVVIVHGFGEH------SGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQ 76 (79)
T ss_pred EEEecC---CCCCCEEEEEeCCcHHH------HHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHH
Confidence 345665 22235566666655432 2334444443 4667999999999999752 345666666 55
Q ss_pred HH
Q 030325 157 WL 158 (179)
Q Consensus 157 fi 158 (179)
|+
T Consensus 77 ~~ 78 (79)
T PF12146_consen 77 FI 78 (79)
T ss_pred Hh
Confidence 54
No 18
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=71.58 E-value=19 Score=31.51 Aligned_cols=78 Identities=13% Similarity=0.047 Sum_probs=49.2
Q ss_pred CCCEEEEeCC-CCcccccccccchHHHHHHhcCCcEEEEeeeeeecccccCChhHHHhc-hHHHHHHHHHhCCCCCCcEE
Q 030325 97 NAPIFVYLGA-EESLDGDISVIGFLTDNAARFNALLVYIEILWEINSIWVKKRSLEKRK-HSWLFQLCTSYNRLCRNSLV 174 (179)
Q Consensus 97 ggPIfly~Gg-E~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~~~~~qal~D-a~fi~~~~~~~~~~~~~~wI 174 (179)
..|.++|..+ -|.+..... ..+-+=..++..++.++-|=||+|-=-++-+--..| ..-++|+.....+ +.+|.|
T Consensus 77 S~pTlLyfh~NAGNmGhr~~---i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs~avldyl~t~~~~-dktkiv 152 (300)
T KOG4391|consen 77 SRPTLLYFHANAGNMGHRLP---IARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDSEAVLDYLMTRPDL-DKTKIV 152 (300)
T ss_pred CCceEEEEccCCCcccchhh---HHHHHHHHcCceEEEEEeeccccCCCCccccceeccHHHHHHHHhcCccC-CcceEE
Confidence 5787777654 444433221 233445688999999999999999643332222334 3445777776665 447999
Q ss_pred Eecc
Q 030325 175 YKGK 178 (179)
Q Consensus 175 ~~G~ 178 (179)
.+|.
T Consensus 153 lfGr 156 (300)
T KOG4391|consen 153 LFGR 156 (300)
T ss_pred EEec
Confidence 9985
No 19
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=71.12 E-value=10 Score=30.45 Aligned_cols=74 Identities=11% Similarity=-0.019 Sum_probs=38.8
Q ss_pred CCCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEEeeeeeecccccCChhHHHhc-hHHHHHHHHHhCCCCCCcEEE
Q 030325 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEILWEINSIWVKKRSLEKRK-HSWLFQLCTSYNRLCRNSLVY 175 (179)
Q Consensus 97 ggPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~~~~~qal~D-a~fi~~~~~~~~~~~~~~wI~ 175 (179)
++|.++++.|=+.-...+ ..+...+++. ..++.+.+|-+|.|.+-......+.+ +..+..+.+.... .+.+.
T Consensus 27 ~~~~vv~~hG~~~~~~~~--~~~~~~l~~~--~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~~~---~~~~l 99 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSW--RDLMPPLARS--FRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAEGL---SPDGV 99 (278)
T ss_pred CCCeEEEEcCCCCCHHHH--HHHHHHHhhC--cEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHcCC---CCceE
Confidence 467677776643221111 1234455553 67999999999999753321123334 4444444443321 24566
Q ss_pred ec
Q 030325 176 KG 177 (179)
Q Consensus 176 ~G 177 (179)
+|
T Consensus 100 vG 101 (278)
T TIGR03056 100 IG 101 (278)
T ss_pred EE
Confidence 55
No 20
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=70.89 E-value=13 Score=31.49 Aligned_cols=73 Identities=10% Similarity=-0.134 Sum_probs=39.9
Q ss_pred CCCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEEeeeeeecccccCCh-hHHHhc-hHHHHHHHHHhCCCCCCcEE
Q 030325 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEILWEINSIWVKKR-SLEKRK-HSWLFQLCTSYNRLCRNSLV 174 (179)
Q Consensus 97 ggPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~~~~-~qal~D-a~fi~~~~~~~~~~~~~~wI 174 (179)
+.||++.-|+.+..... .+......-+-.+|++++|-||.|.+-... .-.+.| +..+..+.+..+. .+++
T Consensus 27 ~~~lvllHG~~~~~~~~-----~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~---~~~~ 98 (306)
T TIGR01249 27 GKPVVFLHGGPGSGTDP-----GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKLGI---KNWL 98 (306)
T ss_pred CCEEEEECCCCCCCCCH-----HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCC---CCEE
Confidence 45788888876553221 111111123457999999999999754321 112233 4444445544432 3577
Q ss_pred Eec
Q 030325 175 YKG 177 (179)
Q Consensus 175 ~~G 177 (179)
++|
T Consensus 99 lvG 101 (306)
T TIGR01249 99 VFG 101 (306)
T ss_pred EEE
Confidence 776
No 21
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=69.22 E-value=22 Score=30.16 Aligned_cols=79 Identities=15% Similarity=0.153 Sum_probs=49.8
Q ss_pred CCCEEEEeCCCCcccccccc-cchHHHHHHhcCCcEEEEeeeeeecccccCChhHHHhc-hHHHHHHHHHhCCCCCCcEE
Q 030325 97 NAPIFVYLGAEESLDGDISV-IGFLTDNAARFNALLVYIEILWEINSIWVKKRSLEKRK-HSWLFQLCTSYNRLCRNSLV 174 (179)
Q Consensus 97 ggPIfly~GgE~~~~~~~~~-~g~~~~lA~~~~A~lv~lEHRyYG~S~P~~~~~qal~D-a~fi~~~~~~~~~~~~~~wI 174 (179)
+.|++||+-|=|=+.+.... ......++...|+.+|.+..|.--+- ||+..-+...+ ..++..-..+++.+. .+.+
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~-~~p~~~~d~~~a~~~l~~~~~~~g~dp-~~i~ 155 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH-PFPAALEDAYAAYRWLRANAAELGIDP-SRIA 155 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC-CCCchHHHHHHHHHHHHhhhHhhCCCc-cceE
Confidence 68988888777655544332 35678999999999999999987765 55532222222 333332233455534 4677
Q ss_pred Eec
Q 030325 175 YKG 177 (179)
Q Consensus 175 ~~G 177 (179)
+.|
T Consensus 156 v~G 158 (312)
T COG0657 156 VAG 158 (312)
T ss_pred EEe
Confidence 666
No 22
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=68.96 E-value=5 Score=29.16 Aligned_cols=51 Identities=10% Similarity=-0.006 Sum_probs=32.0
Q ss_pred hHHHHHHhcCCcEEEEeeeeeecccccCChhHHHhchHHHHHHHHHhCCCCCCcEEEecc
Q 030325 119 FLTDNAARFNALLVYIEILWEINSIWVKKRSLEKRKHSWLFQLCTSYNRLCRNSLVYKGK 178 (179)
Q Consensus 119 ~~~~lA~~~~A~lv~lEHRyYG~S~P~~~~~qal~Da~fi~~~~~~~~~~~~~~wI~~G~ 178 (179)
+...+|++ |-.++.+++|+.|.+.-..+.++.+ ..+.+.+. +..+++.+|-
T Consensus 18 ~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~--~~~~i~l~G~ 68 (145)
T PF12695_consen 18 LAEALAEQ-GYAVVAFDYPGHGDSDGADAVERVL------ADIRAGYP--DPDRIILIGH 68 (145)
T ss_dssp HHHHHHHT-TEEEEEESCTTSTTSHHSHHHHHHH------HHHHHHHC--TCCEEEEEEE
T ss_pred HHHHHHHC-CCEEEEEecCCCCccchhHHHHHHH------HHHHhhcC--CCCcEEEEEE
Confidence 44456666 9999999999999984333333333 33323333 3468888873
No 23
>PRK10749 lysophospholipase L2; Provisional
Probab=68.58 E-value=21 Score=30.71 Aligned_cols=72 Identities=7% Similarity=-0.155 Sum_probs=42.4
Q ss_pred CCCEEEEeCCCCcccccccccchHHHHHH---hcCCcEEEEeeeeeeccccc---------CChhHHHhc-hHHHHHHHH
Q 030325 97 NAPIFVYLGAEESLDGDISVIGFLTDNAA---RFNALLVYIEILWEINSIWV---------KKRSLEKRK-HSWLFQLCT 163 (179)
Q Consensus 97 ggPIfly~GgE~~~~~~~~~~g~~~~lA~---~~~A~lv~lEHRyYG~S~P~---------~~~~qal~D-a~fi~~~~~ 163 (179)
++|+++++.|=+. . .+.+.++|+ +.|-.++.+.+|=+|.|-+. .+.+.-.+| ..++.++.+
T Consensus 53 ~~~~vll~HG~~~---~---~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 126 (330)
T PRK10749 53 HDRVVVICPGRIE---S---YVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQ 126 (330)
T ss_pred CCcEEEEECCccc---h---HHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHh
Confidence 3556666666321 1 223344443 45788999999999999632 134555666 556665544
Q ss_pred HhCCCCCCcEEEec
Q 030325 164 SYNRLCRNSLVYKG 177 (179)
Q Consensus 164 ~~~~~~~~~wI~~G 177 (179)
.+ +..+.+.+|
T Consensus 127 ~~---~~~~~~l~G 137 (330)
T PRK10749 127 PG---PYRKRYALA 137 (330)
T ss_pred cC---CCCCeEEEE
Confidence 32 234677766
No 24
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=68.13 E-value=18 Score=31.61 Aligned_cols=76 Identities=12% Similarity=0.074 Sum_probs=55.1
Q ss_pred CCEEEEeCCCC-cccccccccchHHHHHHhcCCcEEEEeeeeeecccccCChhHHHhchHH-HHHHHHHhCCCCCCcEEE
Q 030325 98 APIFVYLGAEE-SLDGDISVIGFLTDNAARFNALLVYIEILWEINSIWVKKRSLEKRKHSW-LFQLCTSYNRLCRNSLVY 175 (179)
Q Consensus 98 gPIfly~GgE~-~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~~~~~qal~Da~f-i~~~~~~~~~~~~~~wI~ 175 (179)
.+++||+.|-. ++. ...-++..++..+|-.++..--|=||.|.=.++-....+|... .+.+++.++ +..+.|.
T Consensus 60 ~~~lly~hGNa~Dlg---q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g--~~~~Iil 134 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLG---QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYG--SPERIIL 134 (258)
T ss_pred ceEEEEcCCcccchH---HHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcC--CCceEEE
Confidence 58999998872 222 1223566788888999999999999999755555577888433 366777876 4568999
Q ss_pred ecc
Q 030325 176 KGK 178 (179)
Q Consensus 176 ~G~ 178 (179)
+|.
T Consensus 135 ~G~ 137 (258)
T KOG1552|consen 135 YGQ 137 (258)
T ss_pred EEe
Confidence 884
No 25
>PLN02511 hydrolase
Probab=68.01 E-value=21 Score=31.93 Aligned_cols=76 Identities=14% Similarity=0.077 Sum_probs=45.8
Q ss_pred CCCEEEEe-CCCCcccccccccchHHHHHHhcCCcEEEEeeeeeecccccCC---hhHHHhc-hHHHHHHHHHhCCCCCC
Q 030325 97 NAPIFVYL-GAEESLDGDISVIGFLTDNAARFNALLVYIEILWEINSIWVKK---RSLEKRK-HSWLFQLCTSYNRLCRN 171 (179)
Q Consensus 97 ggPIfly~-GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~~~---~~qal~D-a~fi~~~~~~~~~~~~~ 171 (179)
++|+++++ |.+|.....+. .. +...+.+.|-.+|.+.+|=+|.|..... ......| ...+.+++..+. +.
T Consensus 99 ~~p~vvllHG~~g~s~~~y~-~~-~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~---~~ 173 (388)
T PLN02511 99 DAPVLILLPGLTGGSDDSYV-RH-MLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYP---SA 173 (388)
T ss_pred CCCEEEEECCCCCCCCCHHH-HH-HHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCC---CC
Confidence 57766666 55554332111 11 2223345678899999999999964321 1233456 778888887763 35
Q ss_pred cEEEec
Q 030325 172 SLVYKG 177 (179)
Q Consensus 172 ~wI~~G 177 (179)
+.+.+|
T Consensus 174 ~~~lvG 179 (388)
T PLN02511 174 NLYAAG 179 (388)
T ss_pred CEEEEE
Confidence 777776
No 26
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=67.93 E-value=14 Score=33.38 Aligned_cols=71 Identities=8% Similarity=-0.042 Sum_probs=45.4
Q ss_pred CCEEEEeCCCCcccccccccchHHHHHHh---cCCcEEEEeeeeeeccccc----CChhHHHhc-hHHHHHHHHHhCCCC
Q 030325 98 APIFVYLGAEESLDGDISVIGFLTDNAAR---FNALLVYIEILWEINSIWV----KKRSLEKRK-HSWLFQLCTSYNRLC 169 (179)
Q Consensus 98 gPIfly~GgE~~~~~~~~~~g~~~~lA~~---~~A~lv~lEHRyYG~S~P~----~~~~qal~D-a~fi~~~~~~~~~~~ 169 (179)
.|+++++-|=+.- ...+..+|+. .|-.++++.+|=||+|..- .+.++..+| ..++.++..++ +
T Consensus 136 ~~~Vl~lHG~~~~------~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~---~ 206 (395)
T PLN02652 136 RGILIIIHGLNEH------SGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSEN---P 206 (395)
T ss_pred ceEEEEECCchHH------HHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhC---C
Confidence 4566666654321 1122333433 3678999999999999642 245666788 88888887764 2
Q ss_pred CCcEEEec
Q 030325 170 RNSLVYKG 177 (179)
Q Consensus 170 ~~~wI~~G 177 (179)
..+++.+|
T Consensus 207 ~~~i~lvG 214 (395)
T PLN02652 207 GVPCFLFG 214 (395)
T ss_pred CCCEEEEE
Confidence 34787777
No 27
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=67.39 E-value=5.4 Score=29.53 Aligned_cols=25 Identities=28% Similarity=0.137 Sum_probs=11.3
Q ss_pred CCcchhhHHHHHHHHHHHHHhhhhc
Q 030325 1 MHSSIASYQWLLYIFTVISSLQVSA 25 (179)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~ 25 (179)
|.|-.+.++.|++.++||+++.++|
T Consensus 1 MaSK~~llL~l~LA~lLlisSevaa 25 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLLISSEVAA 25 (95)
T ss_pred CchhHHHHHHHHHHHHHHHHhhhhh
Confidence 6655544433333333344444444
No 28
>PRK10673 acyl-CoA esterase; Provisional
Probab=67.07 E-value=19 Score=28.74 Aligned_cols=46 Identities=20% Similarity=0.039 Sum_probs=28.4
Q ss_pred CCCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEEeeeeeecccccCC
Q 030325 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEILWEINSIWVKK 147 (179)
Q Consensus 97 ggPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~~~ 147 (179)
+.||++.-|.-++.... ..+...+++. -.+|.++.|-+|+|.+...
T Consensus 16 ~~~iv~lhG~~~~~~~~---~~~~~~l~~~--~~vi~~D~~G~G~s~~~~~ 61 (255)
T PRK10673 16 NSPIVLVHGLFGSLDNL---GVLARDLVND--HDIIQVDMRNHGLSPRDPV 61 (255)
T ss_pred CCCEEEECCCCCchhHH---HHHHHHHhhC--CeEEEECCCCCCCCCCCCC
Confidence 44566666654443221 1234455554 4899999999999987543
No 29
>PRK10162 acetyl esterase; Provisional
Probab=66.83 E-value=33 Score=29.62 Aligned_cols=77 Identities=9% Similarity=0.064 Sum_probs=44.1
Q ss_pred CCCEEEEeCCCCcccccc-cccchHHHHHHhcCCcEEEEeeeeeecccccCChhHHHhc-hHHHHHHH---HHhCCCCCC
Q 030325 97 NAPIFVYLGAEESLDGDI-SVIGFLTDNAARFNALLVYIEILWEINSIWVKKRSLEKRK-HSWLFQLC---TSYNRLCRN 171 (179)
Q Consensus 97 ggPIfly~GgE~~~~~~~-~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~~~~~qal~D-a~fi~~~~---~~~~~~~~~ 171 (179)
+.|+++|+-|=|-..+.. ........+|++.|..||.++.|=-.+ .|++ +++.| ...+..+. ++++.. ..
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape-~~~p---~~~~D~~~a~~~l~~~~~~~~~d-~~ 154 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPE-ARFP---QAIEEIVAVCCYFHQHAEDYGIN-MS 154 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCC-CCCC---CcHHHHHHHHHHHHHhHHHhCCC-hh
Confidence 468777776544222211 112356788999999999999884332 2343 45555 33444443 345543 24
Q ss_pred cEEEecc
Q 030325 172 SLVYKGK 178 (179)
Q Consensus 172 ~wI~~G~ 178 (179)
+.++.|.
T Consensus 155 ~i~l~G~ 161 (318)
T PRK10162 155 RIGFAGD 161 (318)
T ss_pred HEEEEEE
Confidence 7877773
No 30
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=63.32 E-value=24 Score=35.43 Aligned_cols=76 Identities=9% Similarity=0.049 Sum_probs=46.8
Q ss_pred CCCEEEEeCCCCcccccccccchHHHHHHhc---CCcEEEEeeeeeecccc----------------c----------CC
Q 030325 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARF---NALLVYIEILWEINSIW----------------V----------KK 147 (179)
Q Consensus 97 ggPIfly~GgE~~~~~~~~~~g~~~~lA~~~---~A~lv~lEHRyYG~S~P----------------~----------~~ 147 (179)
+.|+++++-|=+.-.. .+..+|+.+ |-.+|.+.||.+|+|.. | ++
T Consensus 448 g~P~VVllHG~~g~~~------~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn 521 (792)
T TIGR03502 448 GWPVVIYQHGITGAKE------NALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDN 521 (792)
T ss_pred CCcEEEEeCCCCCCHH------HHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccC
Confidence 4467777766544222 233444444 45699999999999922 2 25
Q ss_pred hhHHHhc-hHHHHHHH------HH---hCCCCCCcEEEecc
Q 030325 148 RSLEKRK-HSWLFQLC------TS---YNRLCRNSLVYKGK 178 (179)
Q Consensus 148 ~~qal~D-a~fi~~~~------~~---~~~~~~~~wI~~G~ 178 (179)
+.|+..| ...+..++ +. .+..+..|+.++|-
T Consensus 522 ~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGH 562 (792)
T TIGR03502 522 LRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGH 562 (792)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEec
Confidence 6899999 65656665 22 11134578888873
No 31
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=58.36 E-value=76 Score=28.65 Aligned_cols=105 Identities=10% Similarity=0.089 Sum_probs=64.7
Q ss_pred eEEEeecCCCCCCCCCCCceEEEEEEeccccCCCCCCCCCCCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEEeee
Q 030325 58 FYYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEIL 137 (179)
Q Consensus 58 ~~f~Q~lDHF~~~~~~~~TF~QRY~vn~~~~~~~~~~~~ggPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHR 137 (179)
.||+-+.|--- +.+..||+--|-.+. .+.||||+.+-|-|.-.-.+ .-+..++......-++++.-|
T Consensus 45 ~yFdekedv~i--~~~~~t~n~Y~t~~~---------~t~gpil~l~HG~G~S~LSf--A~~a~el~s~~~~r~~a~DlR 111 (343)
T KOG2564|consen 45 DYFDEKEDVSI--DGSDLTFNVYLTLPS---------ATEGPILLLLHGGGSSALSF--AIFASELKSKIRCRCLALDLR 111 (343)
T ss_pred Hhhcccccccc--CCCcceEEEEEecCC---------CCCccEEEEeecCcccchhH--HHHHHHHHhhcceeEEEeecc
Confidence 36777777655 444557754333332 23799999887665422111 235667788888889999999
Q ss_pred eeecccccC--C--hhHHHhchHHHHHHHHHhCCCCCCcEEEecc
Q 030325 138 WEINSIWVK--K--RSLEKRKHSWLFQLCTSYNRLCRNSLVYKGK 178 (179)
Q Consensus 138 yYG~S~P~~--~--~~qal~Da~fi~~~~~~~~~~~~~~wI~~G~ 178 (179)
=.|+|+--+ + +++-.+| |...+++-|.- ...+.|.+|-
T Consensus 112 gHGeTk~~~e~dlS~eT~~KD--~~~~i~~~fge-~~~~iilVGH 153 (343)
T KOG2564|consen 112 GHGETKVENEDDLSLETMSKD--FGAVIKELFGE-LPPQIILVGH 153 (343)
T ss_pred ccCccccCChhhcCHHHHHHH--HHHHHHHHhcc-CCCceEEEec
Confidence 999997432 2 3444445 33445555643 3357888873
No 32
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=58.19 E-value=9.5 Score=34.47 Aligned_cols=40 Identities=13% Similarity=0.062 Sum_probs=23.3
Q ss_pred CCCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEEeeeee
Q 030325 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEILWE 139 (179)
Q Consensus 97 ggPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyY 139 (179)
.-||+++.-|=+..- ...+.+..+||.. |..|+++|||+-
T Consensus 99 ~~PvvIFSHGlgg~R--~~yS~~~~eLAS~-GyVV~aieHrDg 138 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSR--TSYSAICGELASH-GYVVAAIEHRDG 138 (379)
T ss_dssp -EEEEEEE--TT--T--TTTHHHHHHHHHT-T-EEEEE---SS
T ss_pred CCCEEEEeCCCCcch--hhHHHHHHHHHhC-CeEEEEeccCCC
Confidence 468888887765432 2245577899987 999999999974
No 33
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=57.27 E-value=50 Score=27.73 Aligned_cols=77 Identities=9% Similarity=-0.060 Sum_probs=37.8
Q ss_pred CCCCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEEeeeeeecccccCChhHHHhc-hHHHHHHHHHhCCCCCCcEE
Q 030325 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEILWEINSIWVKKRSLEKRK-HSWLFQLCTSYNRLCRNSLV 174 (179)
Q Consensus 96 ~ggPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~~~~~qal~D-a~fi~~~~~~~~~~~~~~wI 174 (179)
.++|.++++-|=+.-.+.| ......+++ -|=.++.+++|-+|+|.+.......+.| +..+..+.+... ...+.+
T Consensus 16 ~~~p~vvliHG~~~~~~~w--~~~~~~L~~-~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~--~~~~v~ 90 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCW--YKIRCLMEN-SGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLP--ENEKVI 90 (273)
T ss_pred CCCCeEEEECCCCCCcCcH--HHHHHHHHh-CCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcC--CCCCEE
Confidence 3577666666544322222 112223332 2568999999999988543221122333 333333333321 124677
Q ss_pred Eec
Q 030325 175 YKG 177 (179)
Q Consensus 175 ~~G 177 (179)
.+|
T Consensus 91 lvG 93 (273)
T PLN02211 91 LVG 93 (273)
T ss_pred EEE
Confidence 766
No 34
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=55.67 E-value=44 Score=24.91 Aligned_cols=54 Identities=9% Similarity=-0.045 Sum_probs=32.5
Q ss_pred hHHHHHHhcCCcEEEEeeeeeecccccCC-hhHHHhc-hHHHHHHHHHhCCCCCCcEEEec
Q 030325 119 FLTDNAARFNALLVYIEILWEINSIWVKK-RSLEKRK-HSWLFQLCTSYNRLCRNSLVYKG 177 (179)
Q Consensus 119 ~~~~lA~~~~A~lv~lEHRyYG~S~P~~~-~~qal~D-a~fi~~~~~~~~~~~~~~wI~~G 177 (179)
++..++ -|-.+|+++.|-+|.|.+..+ ....+.+ +.-+..+.+.... .+++.+|
T Consensus 17 ~~~~l~--~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~lvG 72 (228)
T PF12697_consen 17 LAEALA--RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGI---KKVILVG 72 (228)
T ss_dssp HHHHHH--TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTT---SSEEEEE
T ss_pred HHHHHh--CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccc---ccccccc
Confidence 444554 378899999999999976442 1122333 4444444454432 4677776
No 35
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=54.25 E-value=61 Score=25.56 Aligned_cols=45 Identities=20% Similarity=0.053 Sum_probs=26.7
Q ss_pred CCcEEEEeeeeeecccccCChhHHHhc-hHHHHHHHHHhCCCCCCcEEEec
Q 030325 128 NALLVYIEILWEINSIWVKKRSLEKRK-HSWLFQLCTSYNRLCRNSLVYKG 177 (179)
Q Consensus 128 ~A~lv~lEHRyYG~S~P~~~~~qal~D-a~fi~~~~~~~~~~~~~~wI~~G 177 (179)
+--+++++.|-||.|.+-.. ..+.+ +..+..+.+... ..+.+.+|
T Consensus 27 ~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~l~~~l~~~~---~~~~~lvG 72 (242)
T PRK11126 27 DYPRLYIDLPGHGGSAAISV--DGFADVSRLLSQTLQSYN---ILPYWLVG 72 (242)
T ss_pred CCCEEEecCCCCCCCCCccc--cCHHHHHHHHHHHHHHcC---CCCeEEEE
Confidence 45799999999999965332 12333 444444444432 23566665
No 36
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=54.02 E-value=49 Score=30.28 Aligned_cols=81 Identities=12% Similarity=0.009 Sum_probs=50.1
Q ss_pred CCCEEEEeCCCCccccccc---ccchHHHHHHhcCCcEEEEeeeeeecccccCChhHHHhc-hHHHHHHHHHhCCCCCCc
Q 030325 97 NAPIFVYLGAEESLDGDIS---VIGFLTDNAARFNALLVYIEILWEINSIWVKKRSLEKRK-HSWLFQLCTSYNRLCRNS 172 (179)
Q Consensus 97 ggPIfly~GgE~~~~~~~~---~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~~~~~qal~D-a~fi~~~~~~~~~~~~~~ 172 (179)
+.=|++..|+-.-.+.... ...-+.++|++.+|.++..--|=+|.|.=-.+.+.-.+| ..-+++++.+.....-..
T Consensus 137 ~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~G~ka~~ 216 (365)
T PF05677_consen 137 QRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEEQGPKAKN 216 (365)
T ss_pred CcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCCHHHHHHHHHHHHHHHHhcccCCChhe
Confidence 4556665655444444211 123578999999999999999999999754455555566 444455554333323335
Q ss_pred EEEec
Q 030325 173 LVYKG 177 (179)
Q Consensus 173 wI~~G 177 (179)
.|.+|
T Consensus 217 Ii~yG 221 (365)
T PF05677_consen 217 IILYG 221 (365)
T ss_pred EEEee
Confidence 66665
No 37
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=46.56 E-value=55 Score=29.79 Aligned_cols=87 Identities=11% Similarity=0.074 Sum_probs=60.9
Q ss_pred CCCceeeEEEeecCCCC--CCCCCCCceEEEEEEeccccCCCCCCCCCCCEEEEeCCCCcccccccccch-HHHHHHhcC
Q 030325 52 SKDFQTFYYNQTLDHFN--YRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYLGAEESLDGDISVIGF-LTDNAARFN 128 (179)
Q Consensus 52 ~~~~~~~~f~Q~lDHF~--~~~~~~~TF~QRY~vn~~~~~~~~~~~~ggPIfly~GgE~~~~~~~~~~g~-~~~lA~~~~ 128 (179)
...+.+..|.-|+++.= .-|.+.++=.-+|.+ .+-|.. +..||.+.+.|-|+. .++-...+ ...|+++ |
T Consensus 50 ~~~~~eG~F~SP~~~~~~~~lP~es~~a~~~~~~-P~~~~~-----~~rp~~IhLagTGDh-~f~rR~~l~a~pLl~~-g 121 (348)
T PF09752_consen 50 DCKIREGEFRSPLAFYLPGLLPEESRTARFQLLL-PKRWDS-----PYRPVCIHLAGTGDH-GFWRRRRLMARPLLKE-G 121 (348)
T ss_pred ceEEEEeEeCCchhhhccccCChhHhheEEEEEE-CCcccc-----CCCceEEEecCCCcc-chhhhhhhhhhHHHHc-C
Confidence 34577889999987752 335555554445555 445532 369999999999884 33333334 4678888 9
Q ss_pred CcEEEEeeeeeecccccC
Q 030325 129 ALLVYIEILWEINSIWVK 146 (179)
Q Consensus 129 A~lv~lEHRyYG~S~P~~ 146 (179)
-.-+.+|.=|||+=+|-.
T Consensus 122 i~s~~le~Pyyg~RkP~~ 139 (348)
T PF09752_consen 122 IASLILENPYYGQRKPKD 139 (348)
T ss_pred cceEEEecccccccChhH
Confidence 999999999999999954
No 38
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=46.02 E-value=54 Score=27.53 Aligned_cols=79 Identities=16% Similarity=0.096 Sum_probs=42.4
Q ss_pred CCCEEEEeCCCCc-ccccccccchHHHHHHhcCCcEEEEeeeeeec----ccccCChhH-HHhch----HHHHHHHHHhC
Q 030325 97 NAPIFVYLGAEES-LDGDISVIGFLTDNAARFNALLVYIEILWEIN----SIWVKKRSL-EKRKH----SWLFQLCTSYN 166 (179)
Q Consensus 97 ggPIfly~GgE~~-~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~----S~P~~~~~q-al~Da----~fi~~~~~~~~ 166 (179)
.-|++|.+=|=+. .+.+.. ..-+.++|.+.|.++|+.|--.-.. ...+.+..+ .-.|. ..|+++.++|+
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~-~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~ 93 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAA-GSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYN 93 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHh-hcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcc
Confidence 4688888765544 233222 2246789999999999998421100 011111111 11123 34455566777
Q ss_pred CCCCCcEEEec
Q 030325 167 RLCRNSLVYKG 177 (179)
Q Consensus 167 ~~~~~~wI~~G 177 (179)
.+. +++.+.|
T Consensus 94 iD~-~RVyv~G 103 (220)
T PF10503_consen 94 IDP-SRVYVTG 103 (220)
T ss_pred cCC-CceeeEE
Confidence 644 4777666
No 39
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=44.82 E-value=94 Score=25.47 Aligned_cols=71 Identities=8% Similarity=0.112 Sum_probs=35.9
Q ss_pred CCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEEeeeeeecccccCChhHHHhc-hHHHHHHHHHhCCCCCCcEEEe
Q 030325 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEILWEINSIWVKKRSLEKRK-HSWLFQLCTSYNRLCRNSLVYK 176 (179)
Q Consensus 98 gPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~~~~~qal~D-a~fi~~~~~~~~~~~~~~wI~~ 176 (179)
.||++.=|--++... | ...+..+++ +-.+|++.+|=+|+|..-. ....+.+ +..+..+.+..+. .+.+.+
T Consensus 26 ~plvllHG~~~~~~~-w--~~~~~~L~~--~~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~~~~~~i~~l~~---~~~~Lv 96 (276)
T TIGR02240 26 TPLLIFNGIGANLEL-V--FPFIEALDP--DLEVIAFDVPGVGGSSTPR-HPYRFPGLAKLAARMLDYLDY---GQVNAI 96 (276)
T ss_pred CcEEEEeCCCcchHH-H--HHHHHHhcc--CceEEEECCCCCCCCCCCC-CcCcHHHHHHHHHHHHHHhCc---CceEEE
Confidence 467776663222211 1 122233333 3589999999999995321 1223344 4444444444332 246665
Q ss_pred c
Q 030325 177 G 177 (179)
Q Consensus 177 G 177 (179)
|
T Consensus 97 G 97 (276)
T TIGR02240 97 G 97 (276)
T ss_pred E
Confidence 5
No 40
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=42.69 E-value=1.1e+02 Score=26.68 Aligned_cols=37 Identities=3% Similarity=-0.254 Sum_probs=28.4
Q ss_pred cCCcEEEEeeeeeecccc----c---CChhHHHhc-hHHHHHHHH
Q 030325 127 FNALLVYIEILWEINSIW----V---KKRSLEKRK-HSWLFQLCT 163 (179)
Q Consensus 127 ~~A~lv~lEHRyYG~S~P----~---~~~~qal~D-a~fi~~~~~ 163 (179)
-|-.|+++.||-.|+|.- . ++.++-..| ..++..+++
T Consensus 73 ~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~ 117 (332)
T TIGR01607 73 NGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRIND 117 (332)
T ss_pred CCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhh
Confidence 377899999999999862 1 356777788 788887766
No 41
>PRK03592 haloalkane dehalogenase; Provisional
Probab=40.14 E-value=66 Score=26.62 Aligned_cols=72 Identities=13% Similarity=-0.024 Sum_probs=38.0
Q ss_pred CCCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEEeeeeeecccccCChhHHHhc-hHHHHHHHHHhCCCCCCcEEE
Q 030325 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEILWEINSIWVKKRSLEKRK-HSWLFQLCTSYNRLCRNSLVY 175 (179)
Q Consensus 97 ggPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~~~~~qal~D-a~fi~~~~~~~~~~~~~~wI~ 175 (179)
+.||+++-|.-+... .| ..++..+++.+ -+|++..|=||.|-+... ...+.+ +.-+..+.+.... .+.++
T Consensus 27 g~~vvllHG~~~~~~-~w--~~~~~~L~~~~--~via~D~~G~G~S~~~~~-~~~~~~~a~dl~~ll~~l~~---~~~~l 97 (295)
T PRK03592 27 GDPIVFLHGNPTSSY-LW--RNIIPHLAGLG--RCLAPDLIGMGASDKPDI-DYTFADHARYLDAWFDALGL---DDVVL 97 (295)
T ss_pred CCEEEEECCCCCCHH-HH--HHHHHHHhhCC--EEEEEcCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHhCC---CCeEE
Confidence 456666666432221 12 13455666664 899999999999954321 122333 3334444433322 35666
Q ss_pred ec
Q 030325 176 KG 177 (179)
Q Consensus 176 ~G 177 (179)
+|
T Consensus 98 vG 99 (295)
T PRK03592 98 VG 99 (295)
T ss_pred EE
Confidence 65
No 42
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=39.87 E-value=1.1e+02 Score=27.88 Aligned_cols=46 Identities=17% Similarity=0.049 Sum_probs=30.8
Q ss_pred CCCEEEEeCCCCccc-ccccccchHHHHHHhcCCcEEEEeeeeeeccccc
Q 030325 97 NAPIFVYLGAEESLD-GDISVIGFLTDNAARFNALLVYIEILWEINSIWV 145 (179)
Q Consensus 97 ggPIfly~GgE~~~~-~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~ 145 (179)
..|++|+.||-+... ..+ ..+.+...+.|-.++.++.|-+|+|...
T Consensus 193 ~~P~Vli~gG~~~~~~~~~---~~~~~~La~~Gy~vl~~D~pG~G~s~~~ 239 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYY---RLFRDYLAPRGIAMLTIDMPSVGFSSKW 239 (414)
T ss_pred CccEEEEeCCcccchhhhH---HHHHHHHHhCCCEEEEECCCCCCCCCCC
Confidence 479999998865421 111 1223333455888999999999999654
No 43
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=38.71 E-value=3.2e+02 Score=25.22 Aligned_cols=50 Identities=16% Similarity=0.137 Sum_probs=30.5
Q ss_pred CCcEEEEe-eeeeecccc------cCChhHHHhc-hHHHHHHHHHhCCCCCCcEEEecc
Q 030325 128 NALLVYIE-ILWEINSIW------VKKRSLEKRK-HSWLFQLCTSYNRLCRNSLVYKGK 178 (179)
Q Consensus 128 ~A~lv~lE-HRyYG~S~P------~~~~~qal~D-a~fi~~~~~~~~~~~~~~wI~~G~ 178 (179)
.|.+|++| -==-|=|.. ..+.++| .| ..|+..+.+.+....+.++.++|.
T Consensus 115 ~anllfiDqPvGtGfSy~~~~~~~~~d~~~a-~~~~~fl~~f~~~~p~~~~~~~yi~GE 172 (433)
T PLN03016 115 MANIIFLDQPVGSGFSYSKTPIDKTGDISEV-KRTHEFLQKWLSRHPQYFSNPLYVVGD 172 (433)
T ss_pred cCcEEEecCCCCCCccCCCCCCCccCCHHHH-HHHHHHHHHHHHhChhhcCCCEEEEcc
Confidence 37888888 111233321 1223445 67 889988888776655668888774
No 44
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=38.43 E-value=86 Score=27.43 Aligned_cols=44 Identities=14% Similarity=-0.150 Sum_probs=25.6
Q ss_pred CCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEEeeeeeeccccc
Q 030325 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEILWEINSIWV 145 (179)
Q Consensus 98 gPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~ 145 (179)
+|.+|++-|-+.-...| ...+..+++ +-.+|++.+|=||+|-+.
T Consensus 88 gp~lvllHG~~~~~~~w--~~~~~~L~~--~~~via~Dl~G~G~S~~~ 131 (360)
T PLN02679 88 GPPVLLVHGFGASIPHW--RRNIGVLAK--NYTVYAIDLLGFGASDKP 131 (360)
T ss_pred CCeEEEECCCCCCHHHH--HHHHHHHhc--CCEEEEECCCCCCCCCCC
Confidence 46666665544221112 112333443 468999999999999643
No 45
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=38.28 E-value=96 Score=26.34 Aligned_cols=45 Identities=4% Similarity=-0.074 Sum_probs=25.8
Q ss_pred CcEEEEeeeeeecccccCChhHHHhc-hHHHHHHHHHhCCCCCCcEEEec
Q 030325 129 ALLVYIEILWEINSIWVKKRSLEKRK-HSWLFQLCTSYNRLCRNSLVYKG 177 (179)
Q Consensus 129 A~lv~lEHRyYG~S~P~~~~~qal~D-a~fi~~~~~~~~~~~~~~wI~~G 177 (179)
-.++.+++|-+|.|.+... ...+.+ +..+..+.+.++ ..+++.+|
T Consensus 158 ~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~lvG 203 (371)
T PRK14875 158 RPVIALDLPGHGASSKAVG-AGSLDELAAAVLAFLDALG---IERAHLVG 203 (371)
T ss_pred CEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHHHHHHhcC---CccEEEEe
Confidence 5799999999999954322 112333 444444444443 13566666
No 46
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=38.03 E-value=2.4e+02 Score=23.54 Aligned_cols=40 Identities=18% Similarity=0.159 Sum_probs=28.3
Q ss_pred CCCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEEee
Q 030325 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEI 136 (179)
Q Consensus 97 ggPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEH 136 (179)
..|+++++.|-+.....+...+.+..+|.+.|-.||+.+-
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~ 80 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDT 80 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCC
Confidence 4798888887665444444334456788888989999885
No 47
>PRK10985 putative hydrolase; Provisional
Probab=36.26 E-value=1.2e+02 Score=25.98 Aligned_cols=76 Identities=17% Similarity=0.107 Sum_probs=42.7
Q ss_pred CCCEEEEeCCC-CcccccccccchHHHHHHhcCCcEEEEeeeeeeccccc-CC--hhHHHhc-hHHHHHHHHHhCCCCCC
Q 030325 97 NAPIFVYLGAE-ESLDGDISVIGFLTDNAARFNALLVYIEILWEINSIWV-KK--RSLEKRK-HSWLFQLCTSYNRLCRN 171 (179)
Q Consensus 97 ggPIfly~GgE-~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~-~~--~~qal~D-a~fi~~~~~~~~~~~~~ 171 (179)
..|+++++-|= +....... .. +.+...+.|-.+|...+|=+|.|... .. ......| ...+.++++.+. ..
T Consensus 57 ~~p~vll~HG~~g~~~~~~~-~~-~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~---~~ 131 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYA-HG-LLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFG---HV 131 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHH-HH-HHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCC---CC
Confidence 46766666543 32222111 11 22333455778999999999876321 11 1223577 667787877653 34
Q ss_pred cEEEec
Q 030325 172 SLVYKG 177 (179)
Q Consensus 172 ~wI~~G 177 (179)
+.+++|
T Consensus 132 ~~~~vG 137 (324)
T PRK10985 132 PTAAVG 137 (324)
T ss_pred CEEEEE
Confidence 677776
No 48
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=35.30 E-value=1.2e+02 Score=24.43 Aligned_cols=48 Identities=8% Similarity=-0.163 Sum_probs=27.7
Q ss_pred cCCcEEEEeeeeeecccccC-ChhHHHhchHHHHHHHHHhCCCCCCcEEEec
Q 030325 127 FNALLVYIEILWEINSIWVK-KRSLEKRKHSWLFQLCTSYNRLCRNSLVYKG 177 (179)
Q Consensus 127 ~~A~lv~lEHRyYG~S~P~~-~~~qal~Da~fi~~~~~~~~~~~~~~wI~~G 177 (179)
-+-.+|++.+|=+|.|.+.. +....+..+..+..+...... .+.+++|
T Consensus 59 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~---~~~~lvG 107 (282)
T TIGR03343 59 AGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDI---EKAHLVG 107 (282)
T ss_pred CCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHcCC---CCeeEEE
Confidence 36889999999999997542 212222224444445544332 3455555
No 49
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=34.64 E-value=1.9e+02 Score=24.78 Aligned_cols=73 Identities=11% Similarity=0.020 Sum_probs=42.1
Q ss_pred CCEEEEeCCCCc-ccccccccchHHHHHHh---cCCcEEEEeeeeeecccc-cC--ChhHHHhc-hHHHHHHHHHhCCCC
Q 030325 98 APIFVYLGAEES-LDGDISVIGFLTDNAAR---FNALLVYIEILWEINSIW-VK--KRSLEKRK-HSWLFQLCTSYNRLC 169 (179)
Q Consensus 98 gPIfly~GgE~~-~~~~~~~~g~~~~lA~~---~~A~lv~lEHRyYG~S~P-~~--~~~qal~D-a~fi~~~~~~~~~~~ 169 (179)
.|+++++-|=+. .... ...+..+|+. .|-.++.+.+|-||+|.. .. +.++...| ...+..+++. .
T Consensus 25 ~~~VlllHG~g~~~~~~---~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~-~--- 97 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKS---RRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQ-G--- 97 (266)
T ss_pred ceEEEEECCCcccccch---hHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhc-C---
Confidence 467777766332 1111 1233444554 366899999999999953 22 34555677 5555655543 1
Q ss_pred CCcEEEec
Q 030325 170 RNSLVYKG 177 (179)
Q Consensus 170 ~~~wI~~G 177 (179)
..+.+.+|
T Consensus 98 ~~~v~LvG 105 (266)
T TIGR03101 98 HPPVTLWG 105 (266)
T ss_pred CCCEEEEE
Confidence 24677776
No 50
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=32.67 E-value=1.3e+02 Score=28.20 Aligned_cols=79 Identities=10% Similarity=-0.143 Sum_probs=48.4
Q ss_pred CCCEEEEeCCCCccccc-c-cccchHHHHHHhcCCcEEEEeeeeeecccc-cCCh-hHHHhc-hHHHHHHHHHhCCCCCC
Q 030325 97 NAPIFVYLGAEESLDGD-I-SVIGFLTDNAARFNALLVYIEILWEINSIW-VKKR-SLEKRK-HSWLFQLCTSYNRLCRN 171 (179)
Q Consensus 97 ggPIfly~GgE~~~~~~-~-~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P-~~~~-~qal~D-a~fi~~~~~~~~~~~~~ 171 (179)
..|++|++.|-+..... . ........++ +.|-.+|...+|-+|+|-- +... .+...| ...|..+.++. .++.
T Consensus 21 ~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~-~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D~~~~i~~l~~q~--~~~~ 97 (550)
T TIGR00976 21 PVPVILSRTPYGKDAGLRWGLDKTEPAWFV-AQGYAVVIQDTRGRGASEGEFDLLGSDEAADGYDLVDWIAKQP--WCDG 97 (550)
T ss_pred CCCEEEEecCCCCchhhccccccccHHHHH-hCCcEEEEEeccccccCCCceEecCcccchHHHHHHHHHHhCC--CCCC
Confidence 47888888776642210 0 0111222333 3488999999999999952 2222 567778 88888887652 1335
Q ss_pred cEEEecc
Q 030325 172 SLVYKGK 178 (179)
Q Consensus 172 ~wI~~G~ 178 (179)
++.++|.
T Consensus 98 ~v~~~G~ 104 (550)
T TIGR00976 98 NVGMLGV 104 (550)
T ss_pred cEEEEEe
Confidence 7877773
No 51
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=31.80 E-value=1.3e+02 Score=24.72 Aligned_cols=44 Identities=14% Similarity=-0.131 Sum_probs=26.4
Q ss_pred CCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEEeeeeeeccccc
Q 030325 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEILWEINSIWV 145 (179)
Q Consensus 98 gPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~ 145 (179)
+|.+|++-|=+.-...| ...+..++++ ..+|++..|=||.|.+.
T Consensus 29 ~~~vlllHG~~~~~~~w--~~~~~~L~~~--~~vi~~DlpG~G~S~~~ 72 (294)
T PLN02824 29 GPALVLVHGFGGNADHW--RKNTPVLAKS--HRVYAIDLLGYGYSDKP 72 (294)
T ss_pred CCeEEEECCCCCChhHH--HHHHHHHHhC--CeEEEEcCCCCCCCCCC
Confidence 45555554432222222 1234556665 38999999999999754
No 52
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=31.74 E-value=1.5e+02 Score=23.31 Aligned_cols=68 Identities=13% Similarity=-0.003 Sum_probs=41.9
Q ss_pred CCEEEEeCCCCcccccccccchHHHHHHhcCCc---EEEEeeeeeecc-cccCChhHHHhchHHHHHHHHHhCCCCCCcE
Q 030325 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNAL---LVYIEILWEINS-IWVKKRSLEKRKHSWLFQLCTSYNRLCRNSL 173 (179)
Q Consensus 98 gPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~---lv~lEHRyYG~S-~P~~~~~qal~Da~fi~~~~~~~~~~~~~~w 173 (179)
.|+|++=++.|.+. .+..+|+.+... ++.+|+...+.. .|..++++...+ ++.++++.. ++.|.
T Consensus 1 ~~lf~~p~~gG~~~-------~y~~la~~l~~~~~~v~~i~~~~~~~~~~~~~si~~la~~--y~~~I~~~~---~~gp~ 68 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS-------SYRPLARALPDDVIGVYGIEYPGRGDDEPPPDSIEELASR--YAEAIRARQ---PEGPY 68 (229)
T ss_dssp -EEEEESSTTCSGG-------GGHHHHHHHTTTEEEEEEECSTTSCTTSHEESSHHHHHHH--HHHHHHHHT---SSSSE
T ss_pred CeEEEEcCCccCHH-------HHHHHHHhCCCCeEEEEEEecCCCCCCCCCCCCHHHHHHH--HHHHhhhhC---CCCCe
Confidence 37888888887543 346778877776 888888877633 334455543333 445565553 23377
Q ss_pred EEec
Q 030325 174 VYKG 177 (179)
Q Consensus 174 I~~G 177 (179)
+..|
T Consensus 69 ~L~G 72 (229)
T PF00975_consen 69 VLAG 72 (229)
T ss_dssp EEEE
T ss_pred eehc
Confidence 7776
No 53
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=29.96 E-value=2.1e+02 Score=25.81 Aligned_cols=80 Identities=13% Similarity=-0.012 Sum_probs=44.3
Q ss_pred CCCCEEEEeCCCCcccccccccchHHHHHHhcC-CcEEEEeeee--ee---cccccCChhHHHhc-hHHHHHHHH---Hh
Q 030325 96 ANAPIFVYLGAEESLDGDISVIGFLTDNAARFN-ALLVYIEILW--EI---NSIWVKKRSLEKRK-HSWLFQLCT---SY 165 (179)
Q Consensus 96 ~ggPIfly~GgE~~~~~~~~~~g~~~~lA~~~~-A~lv~lEHRy--YG---~S~P~~~~~qal~D-a~fi~~~~~---~~ 165 (179)
...||++|+-|-+-..+.... .....++++.+ ..+|.+..|- +| ...+-..-...+.| ..-+..+++ .+
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~-~~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~f 171 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSL-YPGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAF 171 (493)
T ss_pred CCCCEEEEEcCCccccCCCCC-CChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 358999999876544333211 12456677665 8899999992 22 11111112355667 444444444 44
Q ss_pred CCCCCCcEEEec
Q 030325 166 NRLCRNSLVYKG 177 (179)
Q Consensus 166 ~~~~~~~wI~~G 177 (179)
..++ .++.++|
T Consensus 172 ggd~-~~v~~~G 182 (493)
T cd00312 172 GGDP-DSVTIFG 182 (493)
T ss_pred CCCc-ceEEEEe
Confidence 5434 4777776
No 54
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=27.41 E-value=2.3e+02 Score=30.73 Aligned_cols=57 Identities=16% Similarity=0.139 Sum_probs=30.6
Q ss_pred EEEEeccccCCCCCCCCCCCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEEeeeeeecccc
Q 030325 80 RYVINFKYWGGGAGADANAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEILWEINSIW 144 (179)
Q Consensus 80 RY~vn~~~~~~~~~~~~ggPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P 144 (179)
+||+.-.-++. .+++|.++++-|=+.-...| ..++..+++. -.+|.+.+|-||+|..
T Consensus 1357 ~~~i~~~~~G~----~~~~~~vVllHG~~~s~~~w--~~~~~~L~~~--~rVi~~Dl~G~G~S~~ 1413 (1655)
T PLN02980 1357 SCLIKVHEVGQ----NAEGSVVLFLHGFLGTGEDW--IPIMKAISGS--ARCISIDLPGHGGSKI 1413 (1655)
T ss_pred EEEEEEEecCC----CCCCCeEEEECCCCCCHHHH--HHHHHHHhCC--CEEEEEcCCCCCCCCC
Confidence 57775544432 12345444544432221222 1233444443 4799999999999964
No 55
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=26.52 E-value=2.3e+02 Score=25.23 Aligned_cols=76 Identities=12% Similarity=0.147 Sum_probs=41.3
Q ss_pred CCEEEEeCCCCcccccccccchHHHHHHhcCC---cEEEEeeee--eecccccCChhHHHhc-hHHHHHHHHHhCC-CCC
Q 030325 98 APIFVYLGAEESLDGDISVIGFLTDNAARFNA---LLVYIEILW--EINSIWVKKRSLEKRK-HSWLFQLCTSYNR-LCR 170 (179)
Q Consensus 98 gPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A---~lv~lEHRy--YG~S~P~~~~~qal~D-a~fi~~~~~~~~~-~~~ 170 (179)
..++|++||=++- ..+..++.+||+.... .+|-+.-|= -| .=++++++-.+| +..|.|++..... .+.
T Consensus 33 ~~~llfIGGLtDG---l~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G--~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~ 107 (303)
T PF08538_consen 33 PNALLFIGGLTDG---LLTVPYLPDLAEALEETGWSLFQVQLSSSYSG--WGTSSLDRDVEEIAQLVEYLRSEKGGHFGR 107 (303)
T ss_dssp SSEEEEE--TT-----TT-STCHHHHHHHHT-TT-EEEEE--GGGBTT--S-S--HHHHHHHHHHHHHHHHHHS------
T ss_pred CcEEEEECCCCCC---CCCCchHHHHHHHhccCCeEEEEEEecCccCC--cCcchhhhHHHHHHHHHHHHHHhhccccCC
Confidence 4489999987652 2234577788887643 355555442 22 124578999999 9999999887422 245
Q ss_pred CcEEEecc
Q 030325 171 NSLVYKGK 178 (179)
Q Consensus 171 ~~wI~~G~ 178 (179)
.|.|.+|-
T Consensus 108 ~kIVLmGH 115 (303)
T PF08538_consen 108 EKIVLMGH 115 (303)
T ss_dssp S-EEEEEE
T ss_pred ccEEEEec
Confidence 68888873
No 56
>PRK05855 short chain dehydrogenase; Validated
Probab=25.70 E-value=86 Score=28.37 Aligned_cols=61 Identities=11% Similarity=-0.071 Sum_probs=32.7
Q ss_pred CCCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEEeeeeeecccccC-----ChhHHHhc-hHHHHHH
Q 030325 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEILWEINSIWVK-----KRSLEKRK-HSWLFQL 161 (179)
Q Consensus 97 ggPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~P~~-----~~~qal~D-a~fi~~~ 161 (179)
++|.+|++.|=+.-...|. .....+++ +-.++++++|-+|.|.+.. +.+...+| ..+++++
T Consensus 24 ~~~~ivllHG~~~~~~~w~--~~~~~L~~--~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l 90 (582)
T PRK05855 24 DRPTVVLVHGYPDNHEVWD--GVAPLLAD--RFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAV 90 (582)
T ss_pred CCCeEEEEcCCCchHHHHH--HHHHHhhc--ceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHh
Confidence 4665666655432222221 12233332 3469999999999996322 24455555 5555543
No 57
>PRK10301 hypothetical protein; Provisional
Probab=25.31 E-value=1.5e+02 Score=22.56 Aligned_cols=11 Identities=9% Similarity=0.344 Sum_probs=6.1
Q ss_pred ceeeEEEeecC
Q 030325 55 FQTFYYNQTLD 65 (179)
Q Consensus 55 ~~~~~f~Q~lD 65 (179)
.-+.+|+.+++
T Consensus 47 ~V~L~F~e~v~ 57 (124)
T PRK10301 47 ALTLNFSEGIE 57 (124)
T ss_pred EEEEEcCCCcc
Confidence 34456666654
No 58
>PLN02209 serine carboxypeptidase
Probab=24.73 E-value=5.6e+02 Score=23.68 Aligned_cols=51 Identities=16% Similarity=0.167 Sum_probs=31.1
Q ss_pred CCcEEEEee-eeeeccc-----ccCChhHHHhc-hHHHHHHHHHhCCCCCCcEEEecc
Q 030325 128 NALLVYIEI-LWEINSI-----WVKKRSLEKRK-HSWLFQLCTSYNRLCRNSLVYKGK 178 (179)
Q Consensus 128 ~A~lv~lEH-RyYG~S~-----P~~~~~qal~D-a~fi~~~~~~~~~~~~~~wI~~G~ 178 (179)
.|.+|++|- ==-|=|. ...+.+++..| ..|++.+.+.+....+.+|-++|.
T Consensus 117 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GE 174 (437)
T PLN02209 117 TANIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGD 174 (437)
T ss_pred cCcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEec
Confidence 467888771 1112222 11122344578 999998888877666678888774
No 59
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=24.02 E-value=2.7e+02 Score=24.98 Aligned_cols=43 Identities=21% Similarity=0.097 Sum_probs=25.7
Q ss_pred CCCEEEEeCCCCcccccccccchHHHHHHhcCCcEEEEeeeeeeccc
Q 030325 97 NAPIFVYLGAEESLDGDISVIGFLTDNAARFNALLVYIEILWEINSI 143 (179)
Q Consensus 97 ggPIfly~GgE~~~~~~~~~~g~~~~lA~~~~A~lv~lEHRyYG~S~ 143 (179)
++|.++++-|=+.-...+. ..+..+++. -.++++++|=+|.|.
T Consensus 104 ~~p~vvllHG~~~~~~~~~--~~~~~L~~~--~~vi~~D~rG~G~S~ 146 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFF--RNFDALASR--FRVIAIDQLGWGGSS 146 (402)
T ss_pred CCCEEEEECCCCcchhHHH--HHHHHHHhC--CEEEEECCCCCCCCC
Confidence 4566666665432111111 123456654 569999999999985
No 60
>PRK03204 haloalkane dehalogenase; Provisional
Probab=22.93 E-value=1.9e+02 Score=24.11 Aligned_cols=46 Identities=9% Similarity=-0.151 Sum_probs=27.9
Q ss_pred CcEEEEeeeeeecccccCChhHHHhc-hHHHHHHHHHhCCCCCCcEEEec
Q 030325 129 ALLVYIEILWEINSIWVKKRSLEKRK-HSWLFQLCTSYNRLCRNSLVYKG 177 (179)
Q Consensus 129 A~lv~lEHRyYG~S~P~~~~~qal~D-a~fi~~~~~~~~~~~~~~wI~~G 177 (179)
-.+|++.+|=||.|..-.+..-.+.| +..+..+.+..+. .+.+.+|
T Consensus 61 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~lvG 107 (286)
T PRK03204 61 FRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLGL---DRYLSMG 107 (286)
T ss_pred cEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHhCC---CCEEEEE
Confidence 57999999999998643322223445 5555555555432 3455555
No 61
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=22.45 E-value=81 Score=28.33 Aligned_cols=42 Identities=24% Similarity=0.313 Sum_probs=28.9
Q ss_pred CCCEEEEeCCCCccccc---ccccchHHHHHHhcCCcEEEEeeee
Q 030325 97 NAPIFVYLGAEESLDGD---ISVIGFLTDNAARFNALLVYIEILW 138 (179)
Q Consensus 97 ggPIfly~GgE~~~~~~---~~~~g~~~~lA~~~~A~lv~lEHRy 138 (179)
.-|+++|.=|=|=+-+. ....++...+|.+.|+.+|.++-|=
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRL 133 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRL 133 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCccc
Confidence 57877776555544332 2234678899999999999886554
No 62
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=20.98 E-value=1.6e+02 Score=25.25 Aligned_cols=49 Identities=14% Similarity=0.121 Sum_probs=29.2
Q ss_pred CCCEEEEeCCCCcccccc-----cccchHHHHHH---hc---CCcEEEEeeeeeeccccc
Q 030325 97 NAPIFVYLGAEESLDGDI-----SVIGFLTDNAA---RF---NALLVYIEILWEINSIWV 145 (179)
Q Consensus 97 ggPIfly~GgE~~~~~~~-----~~~g~~~~lA~---~~---~A~lv~lEHRyYG~S~P~ 145 (179)
+.|++|+.||-+.-.... .+.+.+..... .+ +--+|++.+|=+|.|.+.
T Consensus 57 ~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~ 116 (343)
T PRK08775 57 GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV 116 (343)
T ss_pred CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC
Confidence 569999989877643210 01123322222 22 346999999999988653
No 63
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=20.92 E-value=3.3e+02 Score=23.54 Aligned_cols=49 Identities=4% Similarity=-0.181 Sum_probs=34.7
Q ss_pred hcCCcEEEEeeeeeeccc--ccC---ChhHHHhc-hHHHHHHHHHhCCCCCCcEEEec
Q 030325 126 RFNALLVYIEILWEINSI--WVK---KRSLEKRK-HSWLFQLCTSYNRLCRNSLVYKG 177 (179)
Q Consensus 126 ~~~A~lv~lEHRyYG~S~--P~~---~~~qal~D-a~fi~~~~~~~~~~~~~~wI~~G 177 (179)
.-|-.++.+.||=.|.|. +-+ +..+-..| ..+++.+... ..+.|++.+|
T Consensus 59 ~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~---~~~~p~~l~g 113 (298)
T COG2267 59 ARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEP---DPGLPVFLLG 113 (298)
T ss_pred hCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhcc---CCCCCeEEEE
Confidence 346679999999999996 333 34666666 6777766654 2457888887
Done!