Query 030328
Match_columns 179
No_of_seqs 115 out of 1113
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 12:04:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030328.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030328hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1201 Hydroxysteroid 17-beta 100.0 3.4E-32 7.3E-37 203.8 20.6 144 31-179 32-179 (300)
2 COG4221 Short-chain alcohol de 100.0 4.8E-32 1E-36 198.1 17.4 139 34-178 3-145 (246)
3 KOG1205 Predicted dehydrogenas 100.0 2.8E-32 6E-37 205.5 15.7 144 33-179 8-156 (282)
4 COG0300 DltE Short-chain dehyd 100.0 1.5E-31 3.2E-36 200.2 18.1 143 34-179 3-149 (265)
5 PRK08339 short chain dehydroge 100.0 3.4E-27 7.4E-32 179.5 19.3 142 34-178 5-149 (263)
6 KOG1014 17 beta-hydroxysteroid 100.0 3.7E-27 8E-32 177.4 16.6 141 36-179 48-193 (312)
7 PLN02780 ketoreductase/ oxidor 100.0 6.1E-26 1.3E-30 177.1 22.1 140 35-177 51-197 (320)
8 PRK06139 short chain dehydroge 99.9 6.2E-26 1.3E-30 177.6 18.7 142 33-178 3-148 (330)
9 KOG1200 Mitochondrial/plastidi 99.9 2.5E-26 5.3E-31 162.1 14.5 143 34-179 11-157 (256)
10 PRK07062 short chain dehydroge 99.9 1E-25 2.2E-30 171.3 19.0 144 32-178 3-151 (265)
11 PRK06125 short chain dehydroge 99.9 2.1E-25 4.5E-30 169.1 19.2 143 33-178 3-145 (259)
12 PRK07063 short chain dehydroge 99.9 1.7E-25 3.7E-30 169.6 18.3 142 34-178 4-150 (260)
13 PRK05876 short chain dehydroge 99.9 2E-25 4.3E-30 170.9 18.6 141 35-178 4-148 (275)
14 KOG4169 15-hydroxyprostaglandi 99.9 4.1E-26 9E-31 164.5 12.8 138 34-179 2-143 (261)
15 PRK08415 enoyl-(acyl carrier p 99.9 3.4E-25 7.4E-30 169.5 17.6 138 34-178 2-149 (274)
16 PRK12481 2-deoxy-D-gluconate 3 99.9 5.8E-25 1.3E-29 166.1 17.6 140 34-178 5-148 (251)
17 PRK05854 short chain dehydroge 99.9 4.3E-25 9.3E-30 171.9 17.3 143 31-178 8-155 (313)
18 PRK07791 short chain dehydroge 99.9 5.8E-25 1.3E-29 169.1 17.9 143 35-178 4-162 (286)
19 PRK06114 short chain dehydroge 99.9 7.3E-25 1.6E-29 165.7 18.0 142 33-178 4-150 (254)
20 PRK05872 short chain dehydroge 99.9 8.3E-25 1.8E-29 169.0 18.5 140 33-178 5-148 (296)
21 PRK07109 short chain dehydroge 99.9 1.1E-24 2.5E-29 170.9 18.9 141 34-178 5-149 (334)
22 KOG0725 Reductases with broad 99.9 1.3E-24 2.8E-29 165.3 18.4 143 33-178 4-155 (270)
23 PRK05867 short chain dehydroge 99.9 1.1E-24 2.4E-29 164.6 17.7 141 34-177 6-150 (253)
24 PRK06079 enoyl-(acyl carrier p 99.9 6.4E-25 1.4E-29 166.0 16.3 137 33-178 3-149 (252)
25 PRK08862 short chain dehydroge 99.9 2E-24 4.4E-29 161.0 18.6 141 34-177 2-148 (227)
26 PRK07478 short chain dehydroge 99.9 1.5E-24 3.3E-29 163.8 18.0 140 34-177 3-147 (254)
27 KOG1208 Dehydrogenases with di 99.9 6.2E-25 1.3E-29 169.6 15.8 140 32-176 30-174 (314)
28 PRK07825 short chain dehydroge 99.9 1.8E-24 3.9E-29 165.1 18.0 137 34-178 2-142 (273)
29 PRK08416 7-alpha-hydroxysteroi 99.9 1.8E-24 4E-29 164.1 17.4 143 33-178 4-157 (260)
30 PRK08303 short chain dehydroge 99.9 2.6E-24 5.7E-29 166.9 17.9 141 32-176 3-162 (305)
31 PRK08589 short chain dehydroge 99.9 3.8E-24 8.3E-29 163.4 18.6 138 35-178 4-146 (272)
32 PRK08594 enoyl-(acyl carrier p 99.9 2E-24 4.3E-29 163.8 16.8 138 33-178 3-153 (257)
33 PRK06505 enoyl-(acyl carrier p 99.9 2.9E-24 6.2E-29 164.1 17.3 137 35-178 5-151 (271)
34 PRK06194 hypothetical protein; 99.9 4.7E-24 1E-28 163.8 18.3 143 35-178 4-153 (287)
35 PRK08085 gluconate 5-dehydroge 99.9 5.5E-24 1.2E-28 160.8 18.3 141 34-178 6-150 (254)
36 PRK07792 fabG 3-ketoacyl-(acyl 99.9 8.9E-24 1.9E-28 164.0 19.2 150 28-178 3-160 (306)
37 PRK07533 enoyl-(acyl carrier p 99.9 6.2E-24 1.3E-28 161.1 17.8 139 33-178 6-154 (258)
38 PF00106 adh_short: short chai 99.9 4.2E-24 9.1E-29 151.7 15.9 134 38-179 1-141 (167)
39 PRK06603 enoyl-(acyl carrier p 99.9 5.6E-24 1.2E-28 161.6 17.5 138 34-178 5-152 (260)
40 PRK07523 gluconate 5-dehydroge 99.9 8.3E-24 1.8E-28 159.9 18.3 140 34-177 7-150 (255)
41 PLN02253 xanthoxin dehydrogena 99.9 9.7E-24 2.1E-28 161.6 18.4 140 34-178 15-160 (280)
42 PRK06398 aldose dehydrogenase; 99.9 3.7E-24 8E-29 162.3 15.8 130 34-178 3-136 (258)
43 PRK08265 short chain dehydroge 99.9 1.1E-23 2.3E-28 160.0 18.0 135 35-178 4-142 (261)
44 PRK07097 gluconate 5-dehydroge 99.9 1.5E-23 3.3E-28 159.4 18.7 142 33-178 6-151 (265)
45 PRK05866 short chain dehydroge 99.9 1.6E-23 3.5E-28 161.7 19.0 142 31-176 34-181 (293)
46 PRK09242 tropinone reductase; 99.9 1.7E-23 3.7E-28 158.4 18.7 142 34-178 6-152 (257)
47 PRK07370 enoyl-(acyl carrier p 99.9 5.8E-24 1.2E-28 161.3 16.1 139 34-178 3-153 (258)
48 PLN02730 enoyl-[acyl-carrier-p 99.9 4.1E-24 8.8E-29 165.2 15.3 140 33-178 5-184 (303)
49 PRK07677 short chain dehydroge 99.9 1.5E-23 3.3E-28 158.3 18.0 139 37-178 1-143 (252)
50 PRK07024 short chain dehydroge 99.9 1.1E-23 2.4E-28 159.5 17.3 138 37-179 2-144 (257)
51 PRK05599 hypothetical protein; 99.9 1.1E-23 2.3E-28 158.8 17.0 139 38-179 1-143 (246)
52 PRK06124 gluconate 5-dehydroge 99.9 2.5E-23 5.4E-28 157.3 18.9 143 32-178 6-152 (256)
53 PRK06935 2-deoxy-D-gluconate 3 99.9 1.7E-23 3.6E-28 158.6 17.8 141 33-178 11-155 (258)
54 COG3967 DltE Short-chain dehyd 99.9 6.8E-24 1.5E-28 150.9 14.2 138 34-179 2-145 (245)
55 PRK08690 enoyl-(acyl carrier p 99.9 1.6E-23 3.4E-28 159.2 17.1 138 35-178 4-152 (261)
56 PRK05993 short chain dehydroge 99.9 1.3E-23 2.7E-28 161.0 16.6 133 36-178 3-140 (277)
57 PRK05717 oxidoreductase; Valid 99.9 2.7E-23 5.9E-28 157.1 18.1 139 32-178 5-149 (255)
58 PRK06172 short chain dehydroge 99.9 3.6E-23 7.7E-28 156.2 18.6 142 33-178 3-149 (253)
59 PRK12384 sorbitol-6-phosphate 99.9 3.5E-23 7.6E-28 156.8 18.5 140 37-178 2-146 (259)
60 PRK08267 short chain dehydroge 99.9 2.6E-23 5.7E-28 157.6 17.7 135 38-178 2-141 (260)
61 PRK06138 short chain dehydroge 99.9 3.3E-23 7.2E-28 156.1 18.2 140 34-178 2-145 (252)
62 PRK09072 short chain dehydroge 99.9 3.6E-23 7.7E-28 157.2 18.3 141 34-179 2-145 (263)
63 KOG1610 Corticosteroid 11-beta 99.9 2.3E-23 4.9E-28 157.2 16.8 141 31-178 23-170 (322)
64 PRK08993 2-deoxy-D-gluconate 3 99.9 3E-23 6.5E-28 156.9 17.6 140 34-178 7-150 (253)
65 PRK12747 short chain dehydroge 99.9 2.7E-23 5.8E-28 156.9 17.2 138 35-178 2-150 (252)
66 TIGR01289 LPOR light-dependent 99.9 3.4E-23 7.4E-28 161.3 18.2 140 36-177 2-147 (314)
67 PRK07890 short chain dehydroge 99.9 4.7E-23 1E-27 155.8 18.4 138 35-177 3-145 (258)
68 PRK08277 D-mannonate oxidoredu 99.9 4.6E-23 9.9E-28 157.7 18.5 142 33-178 6-166 (278)
69 PRK07576 short chain dehydroge 99.9 5.3E-23 1.2E-27 156.5 18.7 141 33-178 5-149 (264)
70 PRK06463 fabG 3-ketoacyl-(acyl 99.9 3E-23 6.5E-28 156.9 17.1 136 33-177 3-142 (255)
71 PRK07831 short chain dehydroge 99.9 5.8E-23 1.3E-27 155.9 18.7 143 34-178 14-162 (262)
72 PRK08159 enoyl-(acyl carrier p 99.9 2.7E-23 5.8E-28 158.9 16.8 137 34-177 7-153 (272)
73 PRK08643 acetoin reductase; Va 99.9 6.4E-23 1.4E-27 155.1 18.7 139 37-178 2-144 (256)
74 PRK08278 short chain dehydroge 99.9 4.9E-23 1.1E-27 157.4 18.2 140 34-177 3-153 (273)
75 PRK12823 benD 1,6-dihydroxycyc 99.9 5.6E-23 1.2E-27 155.7 18.3 138 34-176 5-147 (260)
76 PRK07814 short chain dehydroge 99.9 6.9E-23 1.5E-27 155.7 18.8 142 34-178 7-152 (263)
77 PRK08251 short chain dehydroge 99.9 7.5E-23 1.6E-27 153.9 18.7 140 36-178 1-145 (248)
78 PRK07984 enoyl-(acyl carrier p 99.9 2.8E-23 6.1E-28 157.9 16.5 137 35-178 4-151 (262)
79 PRK12859 3-ketoacyl-(acyl-carr 99.9 7E-23 1.5E-27 155.1 18.4 141 34-178 3-160 (256)
80 PRK05855 short chain dehydroge 99.9 4.7E-23 1E-27 171.7 18.7 143 33-178 311-457 (582)
81 PRK07453 protochlorophyllide o 99.9 7.1E-23 1.5E-27 160.0 18.5 141 34-176 3-148 (322)
82 PRK06182 short chain dehydroge 99.9 4.6E-23 1E-27 157.4 17.0 133 36-178 2-138 (273)
83 PRK07035 short chain dehydroge 99.9 1.1E-22 2.4E-27 153.4 18.8 141 34-178 5-150 (252)
84 PRK06180 short chain dehydroge 99.9 7.4E-23 1.6E-27 156.7 17.8 136 36-178 3-142 (277)
85 PRK09186 flagellin modificatio 99.9 7.3E-23 1.6E-27 154.6 17.5 140 35-177 2-149 (256)
86 PRK07904 short chain dehydroge 99.9 5.7E-23 1.2E-27 155.5 16.9 140 36-178 7-151 (253)
87 TIGR01832 kduD 2-deoxy-D-gluco 99.9 7.3E-23 1.6E-27 154.0 17.4 139 34-177 2-144 (248)
88 PRK07102 short chain dehydroge 99.9 9.6E-23 2.1E-27 153.1 17.9 139 37-178 1-140 (243)
89 PRK08936 glucose-1-dehydrogena 99.9 1.5E-22 3.3E-27 153.5 19.1 143 33-178 3-150 (261)
90 KOG1207 Diacetyl reductase/L-x 99.9 2.4E-24 5.1E-29 149.7 8.0 142 32-179 2-143 (245)
91 PRK07856 short chain dehydroge 99.9 8.8E-23 1.9E-27 154.1 17.4 134 34-178 3-140 (252)
92 PLN00015 protochlorophyllide r 99.9 7.1E-23 1.5E-27 159.1 17.0 135 41-177 1-141 (308)
93 PRK12939 short chain dehydroge 99.9 1.6E-22 3.5E-27 152.0 18.5 141 34-178 4-148 (250)
94 PRK05650 short chain dehydroge 99.9 1.2E-22 2.5E-27 155.0 17.9 137 38-178 1-141 (270)
95 PRK06113 7-alpha-hydroxysteroi 99.9 1.8E-22 4E-27 152.6 18.8 140 34-178 8-151 (255)
96 PRK06200 2,3-dihydroxy-2,3-dih 99.9 6.6E-23 1.4E-27 155.7 16.4 136 35-178 4-148 (263)
97 PRK08063 enoyl-(acyl carrier p 99.9 1.5E-22 3.3E-27 152.4 17.9 139 35-177 2-145 (250)
98 PRK06997 enoyl-(acyl carrier p 99.9 9.3E-23 2E-27 154.9 16.8 137 35-178 4-151 (260)
99 PRK07067 sorbitol dehydrogenas 99.9 1.5E-22 3.4E-27 153.1 17.9 139 34-178 3-145 (257)
100 PRK06841 short chain dehydroge 99.9 1.7E-22 3.6E-27 152.7 18.0 139 33-178 11-153 (255)
101 PRK07666 fabG 3-ketoacyl-(acyl 99.9 2.5E-22 5.4E-27 150.4 18.6 141 34-178 4-148 (239)
102 PRK08263 short chain dehydroge 99.9 1.6E-22 3.4E-27 154.7 17.8 136 36-178 2-141 (275)
103 PRK13394 3-hydroxybutyrate deh 99.9 2E-22 4.4E-27 152.6 18.2 140 34-177 4-148 (262)
104 TIGR03325 BphB_TodD cis-2,3-di 99.9 8.4E-23 1.8E-27 155.1 16.0 137 34-178 2-147 (262)
105 PRK06128 oxidoreductase; Provi 99.9 1.6E-22 3.6E-27 156.5 17.9 139 34-178 52-197 (300)
106 KOG1210 Predicted 3-ketosphing 99.9 2.7E-22 5.8E-27 151.2 18.3 140 38-179 34-178 (331)
107 PRK07985 oxidoreductase; Provi 99.9 2.1E-22 4.6E-27 155.5 18.4 138 35-178 47-191 (294)
108 PRK08628 short chain dehydroge 99.9 1.5E-22 3.2E-27 153.3 17.0 140 32-178 2-145 (258)
109 PRK07832 short chain dehydroge 99.9 2.4E-22 5.2E-27 153.4 18.1 139 38-178 1-143 (272)
110 PRK06197 short chain dehydroge 99.9 8.7E-23 1.9E-27 158.4 15.9 140 33-177 12-156 (306)
111 PRK08340 glucose-1-dehydrogena 99.9 1.8E-22 4E-27 153.0 17.2 137 38-178 1-143 (259)
112 PRK06484 short chain dehydroge 99.9 1.4E-22 3.1E-27 167.4 18.0 135 35-178 267-406 (520)
113 PRK07231 fabG 3-ketoacyl-(acyl 99.9 3.1E-22 6.8E-27 150.6 18.3 140 34-178 2-146 (251)
114 PRK12429 3-hydroxybutyrate deh 99.9 2.9E-22 6.4E-27 151.3 17.9 140 35-178 2-145 (258)
115 PRK07774 short chain dehydroge 99.9 3.9E-22 8.4E-27 150.2 18.4 140 34-177 3-149 (250)
116 PRK06179 short chain dehydroge 99.9 1.3E-22 2.8E-27 154.6 15.9 131 36-178 3-137 (270)
117 PRK12938 acetyacetyl-CoA reduc 99.9 3.8E-22 8.2E-27 150.0 18.1 140 35-178 1-145 (246)
118 PRK07889 enoyl-(acyl carrier p 99.9 1.6E-22 3.4E-27 153.3 15.9 132 34-174 4-147 (256)
119 PRK06196 oxidoreductase; Provi 99.9 1.7E-22 3.7E-27 157.4 16.5 133 34-176 23-159 (315)
120 PRK12743 oxidoreductase; Provi 99.9 5E-22 1.1E-26 150.4 18.5 140 36-178 1-145 (256)
121 PRK12935 acetoacetyl-CoA reduc 99.9 4.8E-22 1E-26 149.5 18.3 140 35-178 4-148 (247)
122 PRK06914 short chain dehydroge 99.9 4E-22 8.8E-27 152.6 17.9 139 36-178 2-145 (280)
123 PRK08213 gluconate 5-dehydroge 99.9 5E-22 1.1E-26 150.5 18.1 139 35-177 10-153 (259)
124 PRK08703 short chain dehydroge 99.9 4.8E-22 1E-26 148.9 17.9 142 34-178 3-152 (239)
125 PRK07454 short chain dehydroge 99.9 4.4E-22 9.5E-27 149.3 17.6 138 36-177 5-146 (241)
126 PRK06484 short chain dehydroge 99.9 3.2E-22 7E-27 165.3 18.4 138 35-178 3-146 (520)
127 PRK06500 short chain dehydroge 99.9 4.4E-22 9.5E-27 149.7 17.4 135 35-178 4-142 (249)
128 PRK06701 short chain dehydroge 99.9 6.1E-22 1.3E-26 152.7 18.5 141 32-178 41-187 (290)
129 PRK06483 dihydromonapterin red 99.9 2.9E-22 6.3E-27 149.9 16.1 135 37-178 2-140 (236)
130 PRK06523 short chain dehydroge 99.9 4.7E-22 1E-26 150.7 17.2 133 33-178 5-143 (260)
131 PRK06482 short chain dehydroge 99.9 6.5E-22 1.4E-26 151.2 17.9 134 37-177 2-139 (276)
132 TIGR03206 benzo_BadH 2-hydroxy 99.9 7.6E-22 1.6E-26 148.5 17.9 140 35-178 1-144 (250)
133 PRK08226 short chain dehydroge 99.9 6.7E-22 1.4E-26 150.1 17.7 137 35-176 4-144 (263)
134 PRK05693 short chain dehydroge 99.9 5.1E-22 1.1E-26 151.7 17.1 130 38-178 2-135 (274)
135 TIGR02415 23BDH acetoin reduct 99.9 8.7E-22 1.9E-26 148.6 18.1 138 38-178 1-142 (254)
136 PRK12936 3-ketoacyl-(acyl-carr 99.9 8.6E-22 1.9E-26 147.7 17.9 138 34-178 3-144 (245)
137 PRK06057 short chain dehydroge 99.9 6E-22 1.3E-26 149.8 17.2 135 35-178 5-145 (255)
138 PRK12745 3-ketoacyl-(acyl-carr 99.9 9.5E-22 2.1E-26 148.5 18.0 141 37-178 2-152 (256)
139 PRK12748 3-ketoacyl-(acyl-carr 99.9 1.1E-21 2.3E-26 148.5 18.1 140 34-177 2-158 (256)
140 PRK05875 short chain dehydroge 99.9 1.2E-21 2.7E-26 149.7 18.3 141 34-177 4-150 (276)
141 PRK06123 short chain dehydroge 99.9 1.4E-21 3E-26 147.0 18.3 141 37-178 2-148 (248)
142 PRK09134 short chain dehydroge 99.9 2E-21 4.3E-26 147.2 19.0 138 35-176 7-149 (258)
143 PRK12937 short chain dehydroge 99.9 1.2E-21 2.6E-26 147.0 17.6 138 34-177 2-144 (245)
144 PRK06949 short chain dehydroge 99.9 2.2E-21 4.8E-26 146.7 18.4 143 34-177 6-157 (258)
145 PRK07775 short chain dehydroge 99.9 2E-21 4.3E-26 148.6 18.3 140 35-178 8-151 (274)
146 PRK06947 glucose-1-dehydrogena 99.9 2.5E-21 5.4E-26 145.7 18.3 141 37-178 2-148 (248)
147 PRK06171 sorbitol-6-phosphate 99.9 8E-22 1.7E-26 149.9 15.7 132 34-178 6-150 (266)
148 PRK07326 short chain dehydroge 99.9 2.4E-21 5.1E-26 144.8 17.8 137 35-177 4-144 (237)
149 KOG1209 1-Acyl dihydroxyaceton 99.9 3E-22 6.5E-27 143.4 12.0 134 36-179 6-145 (289)
150 PRK08945 putative oxoacyl-(acy 99.9 2.9E-21 6.3E-26 145.3 18.1 142 34-178 9-157 (247)
151 PRK08264 short chain dehydroge 99.9 2.1E-21 4.5E-26 145.3 17.1 134 34-178 3-138 (238)
152 PRK06300 enoyl-(acyl carrier p 99.9 9.2E-23 2E-27 157.5 10.0 141 32-178 3-183 (299)
153 PRK06198 short chain dehydroge 99.9 3.3E-21 7.1E-26 146.0 18.3 140 35-177 4-148 (260)
154 PRK08220 2,3-dihydroxybenzoate 99.9 2.4E-21 5.2E-26 146.0 17.4 132 33-177 4-139 (252)
155 PRK10538 malonic semialdehyde 99.9 3.3E-21 7.2E-26 145.2 18.1 134 38-178 1-139 (248)
156 PRK09291 short chain dehydroge 99.9 2.5E-21 5.3E-26 146.4 17.4 136 37-178 2-137 (257)
157 PRK12746 short chain dehydroge 99.9 2.6E-21 5.6E-26 146.1 17.5 137 35-177 4-151 (254)
158 PRK12742 oxidoreductase; Provi 99.9 2.4E-21 5.3E-26 144.7 16.9 131 35-176 4-135 (237)
159 PRK12824 acetoacetyl-CoA reduc 99.9 3.6E-21 7.9E-26 144.3 17.9 138 37-178 2-144 (245)
160 PRK05565 fabG 3-ketoacyl-(acyl 99.9 3.6E-21 7.9E-26 144.4 17.9 141 34-178 2-147 (247)
161 PRK07069 short chain dehydroge 99.9 2.7E-21 5.9E-26 145.5 17.1 136 40-178 2-143 (251)
162 TIGR02632 RhaD_aldol-ADH rhamn 99.9 3.3E-21 7.2E-26 163.3 19.3 144 33-178 410-558 (676)
163 PRK06101 short chain dehydroge 99.9 2.6E-21 5.7E-26 145.2 16.7 131 38-178 2-133 (240)
164 PRK12826 3-ketoacyl-(acyl-carr 99.9 5E-21 1.1E-25 144.0 18.1 139 35-177 4-146 (251)
165 PRK07060 short chain dehydroge 99.9 3.8E-21 8.2E-26 144.3 17.4 138 33-178 5-142 (245)
166 TIGR01829 AcAcCoA_reduct aceto 99.9 5.7E-21 1.2E-25 143.0 18.2 137 38-178 1-142 (242)
167 PRK06181 short chain dehydroge 99.9 5.4E-21 1.2E-25 145.1 17.9 137 37-178 1-142 (263)
168 TIGR01500 sepiapter_red sepiap 99.9 3.8E-21 8.3E-26 145.6 16.8 139 39-178 2-156 (256)
169 PRK06550 fabG 3-ketoacyl-(acyl 99.9 2E-21 4.4E-26 145.0 14.6 130 34-178 2-132 (235)
170 TIGR01831 fabG_rel 3-oxoacyl-( 99.9 5.6E-21 1.2E-25 143.0 16.9 136 40-179 1-142 (239)
171 PRK09730 putative NAD(P)-bindi 99.9 9.8E-21 2.1E-25 142.1 18.1 140 38-178 2-147 (247)
172 PRK07201 short chain dehydroge 99.9 5.7E-21 1.2E-25 161.8 18.8 141 34-178 368-514 (657)
173 PRK12828 short chain dehydroge 99.9 8E-21 1.7E-25 141.8 17.4 139 33-177 3-145 (239)
174 TIGR02685 pter_reduc_Leis pter 99.9 4.4E-21 9.5E-26 146.1 16.2 141 38-178 2-165 (267)
175 PRK08642 fabG 3-ketoacyl-(acyl 99.9 1.2E-20 2.6E-25 142.2 18.0 135 35-176 3-149 (253)
176 PRK05653 fabG 3-ketoacyl-(acyl 99.9 1.3E-20 2.8E-25 141.1 18.0 140 34-177 2-145 (246)
177 PRK07074 short chain dehydroge 99.9 1.2E-20 2.7E-25 142.6 17.9 134 37-176 2-139 (257)
178 PRK12827 short chain dehydroge 99.9 1.1E-20 2.4E-25 141.9 17.4 140 35-178 4-152 (249)
179 PRK06940 short chain dehydroge 99.9 8.9E-21 1.9E-25 145.1 16.9 127 37-178 2-131 (275)
180 PRK05557 fabG 3-ketoacyl-(acyl 99.9 2.1E-20 4.5E-25 140.2 18.4 140 35-178 3-147 (248)
181 PRK12744 short chain dehydroge 99.9 1.5E-20 3.2E-25 142.4 17.5 136 34-175 5-149 (257)
182 TIGR01963 PHB_DH 3-hydroxybuty 99.9 2E-20 4.4E-25 141.0 17.9 137 37-177 1-141 (255)
183 PRK05884 short chain dehydroge 99.9 7.7E-21 1.7E-25 141.3 15.3 125 39-175 2-133 (223)
184 PRK12367 short chain dehydroge 99.9 9.4E-21 2E-25 142.8 15.8 132 33-176 10-141 (245)
185 PRK08217 fabG 3-ketoacyl-(acyl 99.9 2.8E-20 6.1E-25 140.0 18.4 138 35-175 3-153 (253)
186 PRK12825 fabG 3-ketoacyl-(acyl 99.9 2.9E-20 6.2E-25 139.4 18.3 139 35-177 4-147 (249)
187 PRK12829 short chain dehydroge 99.9 2E-20 4.3E-25 141.8 17.5 139 34-177 8-151 (264)
188 PRK06077 fabG 3-ketoacyl-(acyl 99.9 3.1E-20 6.7E-25 139.9 18.2 139 34-178 3-146 (252)
189 COG1028 FabG Dehydrogenases wi 99.9 2.2E-20 4.9E-25 140.7 17.3 137 34-177 2-147 (251)
190 PRK07041 short chain dehydroge 99.9 1.2E-20 2.5E-25 140.6 15.4 129 41-178 1-129 (230)
191 PRK06720 hypothetical protein; 99.9 3.5E-20 7.7E-25 132.0 17.0 142 32-177 11-161 (169)
192 PRK07578 short chain dehydroge 99.9 9.3E-21 2E-25 138.4 14.2 116 39-178 2-117 (199)
193 PRK09135 pteridine reductase; 99.9 3.9E-20 8.4E-25 138.9 18.0 138 35-176 4-146 (249)
194 PRK08324 short chain dehydroge 99.9 4.2E-20 9E-25 157.0 18.4 141 34-178 419-563 (681)
195 PF13561 adh_short_C2: Enoyl-( 99.9 1.6E-20 3.5E-25 141.0 13.9 128 44-178 1-139 (241)
196 PRK07023 short chain dehydroge 99.9 3.4E-20 7.4E-25 139.2 14.9 132 38-178 2-142 (243)
197 PRK08261 fabG 3-ketoacyl-(acyl 99.8 8.7E-20 1.9E-24 148.5 17.5 136 34-178 207-348 (450)
198 PRK08017 oxidoreductase; Provi 99.8 1E-19 2.2E-24 137.5 16.7 132 37-178 2-138 (256)
199 PRK09009 C factor cell-cell si 99.8 5.2E-20 1.1E-24 137.5 14.5 127 38-176 1-135 (235)
200 PRK07424 bifunctional sterol d 99.8 1.8E-19 3.9E-24 143.9 17.9 130 34-173 175-305 (406)
201 PRK06953 short chain dehydroge 99.8 1.7E-19 3.7E-24 133.8 16.4 130 38-178 2-135 (222)
202 PRK08177 short chain dehydroge 99.8 7.6E-20 1.7E-24 135.9 14.5 130 38-177 2-135 (225)
203 TIGR01830 3oxo_ACP_reduc 3-oxo 99.8 2.4E-19 5.1E-24 133.9 17.2 135 40-178 1-140 (239)
204 PRK07577 short chain dehydroge 99.8 1.4E-19 3.1E-24 134.9 15.6 125 36-175 2-129 (234)
205 PRK08219 short chain dehydroge 99.8 2.5E-19 5.5E-24 132.8 16.8 131 37-177 3-133 (227)
206 KOG1611 Predicted short chain- 99.8 4.6E-19 9.9E-24 128.1 15.2 142 37-179 3-161 (249)
207 PRK05786 fabG 3-ketoacyl-(acyl 99.8 6.6E-19 1.4E-23 131.6 16.6 134 34-176 2-139 (238)
208 PRK06924 short chain dehydroge 99.8 3.3E-19 7.2E-24 134.3 15.1 134 38-177 2-145 (251)
209 PRK07806 short chain dehydroge 99.8 1.4E-18 3.1E-23 130.6 13.6 130 35-176 4-138 (248)
210 KOG1199 Short-chain alcohol de 99.8 4.3E-19 9.2E-24 123.6 7.9 142 34-179 6-160 (260)
211 TIGR02813 omega_3_PfaA polyket 99.8 5.6E-18 1.2E-22 157.6 16.7 136 36-179 1996-2182(2582)
212 smart00822 PKS_KR This enzymat 99.8 8.2E-18 1.8E-22 119.5 13.9 133 38-178 1-141 (180)
213 PF08659 KR: KR domain; Inter 99.8 9.8E-18 2.1E-22 120.9 14.3 133 39-179 2-142 (181)
214 PLN02989 cinnamyl-alcohol dehy 99.7 9.6E-17 2.1E-21 125.4 13.0 129 36-177 4-133 (325)
215 TIGR02622 CDP_4_6_dhtase CDP-g 99.7 4.8E-16 1E-20 122.8 14.8 128 35-175 2-129 (349)
216 KOG1478 3-keto sterol reductas 99.7 1.3E-15 2.9E-20 112.0 13.7 139 36-177 2-179 (341)
217 PLN02572 UDP-sulfoquinovose sy 99.7 1.8E-15 3.9E-20 122.9 15.6 134 34-175 44-193 (442)
218 COG1086 Predicted nucleoside-d 99.7 1.2E-15 2.6E-20 123.4 14.3 133 35-179 248-382 (588)
219 TIGR03589 PseB UDP-N-acetylglu 99.7 2.7E-15 5.9E-20 117.4 16.0 125 35-176 2-128 (324)
220 PLN03209 translocon at the inn 99.7 2.5E-15 5.5E-20 123.5 15.9 126 35-176 78-211 (576)
221 PLN02896 cinnamyl-alcohol dehy 99.7 3.5E-15 7.6E-20 118.0 16.0 131 35-176 8-141 (353)
222 PLN02653 GDP-mannose 4,6-dehyd 99.7 2.2E-15 4.8E-20 118.5 13.1 134 34-174 3-140 (340)
223 TIGR01472 gmd GDP-mannose 4,6- 99.7 2.2E-15 4.8E-20 118.7 12.9 128 38-174 1-133 (343)
224 PLN02986 cinnamyl-alcohol dehy 99.6 3.8E-15 8.3E-20 116.3 13.6 128 35-176 3-131 (322)
225 KOG1502 Flavonol reductase/cin 99.6 4E-15 8.7E-20 114.3 13.3 128 36-178 5-134 (327)
226 PLN00198 anthocyanidin reducta 99.6 5.9E-15 1.3E-19 116.0 14.4 128 34-176 6-134 (338)
227 PF02719 Polysacc_synt_2: Poly 99.6 8.5E-16 1.8E-20 116.9 8.1 127 40-178 1-133 (293)
228 PLN02214 cinnamoyl-CoA reducta 99.6 5E-15 1.1E-19 116.7 12.9 122 35-176 8-130 (342)
229 PLN02240 UDP-glucose 4-epimera 99.6 2.5E-14 5.5E-19 112.8 15.0 129 34-174 2-133 (352)
230 PLN02583 cinnamoyl-CoA reducta 99.6 1.4E-14 3.1E-19 112.1 13.2 126 36-177 5-132 (297)
231 PRK10217 dTDP-glucose 4,6-dehy 99.6 1.6E-14 3.5E-19 114.2 13.1 130 38-174 2-135 (355)
232 PLN02650 dihydroflavonol-4-red 99.6 3.3E-14 7.1E-19 112.4 14.0 126 36-175 4-130 (351)
233 PLN02662 cinnamyl-alcohol dehy 99.6 3E-14 6.5E-19 111.1 12.4 125 36-175 3-129 (322)
234 COG0623 FabI Enoyl-[acyl-carri 99.6 2.1E-13 4.6E-18 99.1 15.0 132 34-172 3-144 (259)
235 COG1087 GalE UDP-glucose 4-epi 99.6 3.8E-14 8.3E-19 106.9 11.0 120 38-175 1-120 (329)
236 PRK10675 UDP-galactose-4-epime 99.6 1.7E-13 3.8E-18 107.5 14.5 125 39-175 2-126 (338)
237 KOG1204 Predicted dehydrogenas 99.6 6.5E-15 1.4E-19 106.8 5.7 138 36-179 5-151 (253)
238 PRK15181 Vi polysaccharide bio 99.5 2.6E-13 5.6E-18 107.3 13.7 129 33-175 11-143 (348)
239 PRK10084 dTDP-glucose 4,6 dehy 99.5 2.5E-13 5.4E-18 107.3 12.8 129 39-175 2-135 (352)
240 KOG1371 UDP-glucose 4-epimeras 99.5 3.8E-13 8.2E-18 102.5 12.1 127 37-175 2-130 (343)
241 PLN02427 UDP-apiose/xylose syn 99.5 4.8E-13 1E-17 107.0 12.7 126 35-175 12-138 (386)
242 PLN02657 3,8-divinyl protochlo 99.5 1.1E-12 2.4E-17 105.2 12.4 125 35-176 58-185 (390)
243 PF01073 3Beta_HSD: 3-beta hyd 99.5 6E-13 1.3E-17 102.2 10.4 118 41-177 1-120 (280)
244 TIGR01181 dTDP_gluc_dehyt dTDP 99.4 1.5E-12 3.2E-17 101.0 11.8 123 39-174 1-126 (317)
245 TIGR03466 HpnA hopanoid-associ 99.4 1E-12 2.2E-17 102.5 10.2 116 38-176 1-116 (328)
246 TIGR01179 galE UDP-glucose-4-e 99.4 2.5E-12 5.4E-17 100.1 12.3 123 39-175 1-123 (328)
247 PRK13656 trans-2-enoyl-CoA red 99.4 1.1E-11 2.4E-16 97.8 15.5 86 36-123 40-143 (398)
248 PRK12428 3-alpha-hydroxysteroi 99.4 7.2E-13 1.6E-17 99.5 8.4 100 53-177 1-101 (241)
249 PLN00141 Tic62-NAD(P)-related 99.4 6.5E-12 1.4E-16 94.9 13.5 120 34-175 14-134 (251)
250 PLN02686 cinnamoyl-CoA reducta 99.4 8.3E-12 1.8E-16 99.4 14.7 128 34-175 50-182 (367)
251 PF01370 Epimerase: NAD depend 99.4 9.3E-12 2E-16 92.6 11.5 117 40-174 1-117 (236)
252 PLN02260 probable rhamnose bio 99.4 1.3E-11 2.9E-16 105.2 13.8 127 35-175 4-134 (668)
253 PRK11908 NAD-dependent epimera 99.4 2.1E-11 4.5E-16 96.3 13.3 117 38-175 2-120 (347)
254 CHL00194 ycf39 Ycf39; Provisio 99.3 1.6E-11 3.5E-16 95.8 11.5 110 39-174 2-111 (317)
255 PRK09987 dTDP-4-dehydrorhamnos 99.3 1.9E-11 4.2E-16 94.7 11.3 105 38-174 1-105 (299)
256 PRK08125 bifunctional UDP-gluc 99.3 4E-11 8.7E-16 102.1 12.4 120 35-175 313-434 (660)
257 COG0451 WcaG Nucleoside-diphos 99.3 4.2E-11 9E-16 92.8 10.8 117 39-175 2-118 (314)
258 PLN02695 GDP-D-mannose-3',5'-e 99.3 1.5E-10 3.3E-15 92.3 13.9 120 36-175 20-139 (370)
259 TIGR01746 Thioester-redct thio 99.3 8.5E-11 1.8E-15 92.7 11.9 121 39-176 1-139 (367)
260 PF13460 NAD_binding_10: NADH( 99.3 2.7E-10 5.8E-15 81.9 13.5 100 40-175 1-100 (183)
261 TIGR01214 rmlD dTDP-4-dehydror 99.3 8.8E-11 1.9E-15 90.1 11.6 102 39-175 1-102 (287)
262 COG1088 RfbB dTDP-D-glucose 4, 99.2 1.1E-10 2.3E-15 88.3 10.4 123 38-174 1-127 (340)
263 PRK05865 hypothetical protein; 99.2 2.6E-10 5.7E-15 98.4 13.4 104 38-174 1-104 (854)
264 TIGR02197 heptose_epim ADP-L-g 99.2 2.1E-10 4.6E-15 89.0 11.3 114 40-175 1-116 (314)
265 PLN02206 UDP-glucuronate decar 99.2 2.6E-10 5.6E-15 92.9 12.0 118 36-175 118-235 (442)
266 PF04321 RmlD_sub_bind: RmlD s 99.2 6.6E-11 1.4E-15 91.2 7.5 103 38-175 1-103 (286)
267 PRK11150 rfaD ADP-L-glycero-D- 99.2 3.3E-10 7.1E-15 88.0 10.6 111 40-175 2-118 (308)
268 PLN02996 fatty acyl-CoA reduct 99.2 6.3E-10 1.4E-14 91.7 12.1 127 33-175 7-163 (491)
269 PLN02725 GDP-4-keto-6-deoxyman 99.1 3.3E-10 7.1E-15 87.6 9.8 102 41-174 1-102 (306)
270 PLN02166 dTDP-glucose 4,6-dehy 99.1 7.3E-10 1.6E-14 90.1 11.7 117 37-175 120-236 (436)
271 COG1091 RfbD dTDP-4-dehydrorha 99.1 8E-10 1.7E-14 84.0 11.0 100 40-175 3-102 (281)
272 PLN02503 fatty acyl-CoA reduct 99.1 2.3E-09 4.9E-14 89.9 13.6 125 35-175 117-270 (605)
273 TIGR02114 coaB_strep phosphopa 99.1 3E-10 6.5E-15 84.7 7.5 101 35-151 13-117 (227)
274 PRK07201 short chain dehydroge 99.1 1.9E-09 4E-14 91.9 13.3 118 39-175 2-127 (657)
275 PLN02778 3,5-epimerase/4-reduc 99.1 2.2E-09 4.8E-14 83.2 11.9 91 37-154 9-99 (298)
276 PRK08309 short chain dehydroge 99.1 3.5E-09 7.6E-14 76.0 11.0 81 38-121 1-85 (177)
277 PRK12320 hypothetical protein; 99.0 5.2E-09 1.1E-13 88.8 12.3 104 39-176 2-105 (699)
278 KOG1430 C-3 sterol dehydrogena 99.0 1.5E-09 3.3E-14 85.2 8.1 124 36-175 3-128 (361)
279 TIGR01777 yfcH conserved hypot 99.0 3.8E-09 8.3E-14 81.0 10.2 97 40-153 1-97 (292)
280 PF07993 NAD_binding_4: Male s 99.0 3.3E-09 7.2E-14 80.1 9.1 115 42-173 1-135 (249)
281 PRK12548 shikimate 5-dehydroge 98.9 1.9E-08 4.1E-13 77.7 11.1 84 34-122 123-210 (289)
282 PRK05579 bifunctional phosphop 98.9 1.3E-08 2.9E-13 81.6 9.4 80 34-125 185-281 (399)
283 PLN02260 probable rhamnose bio 98.9 2.6E-08 5.7E-13 85.2 11.4 91 37-154 380-470 (668)
284 cd01078 NAD_bind_H4MPT_DH NADP 98.9 7.1E-08 1.5E-12 70.2 11.8 85 33-122 24-108 (194)
285 TIGR03649 ergot_EASG ergot alk 98.8 2.4E-08 5.2E-13 76.7 9.6 73 39-121 1-77 (285)
286 COG1089 Gmd GDP-D-mannose dehy 98.8 9.7E-09 2.1E-13 77.4 6.6 129 36-174 1-132 (345)
287 KOG1202 Animal-type fatty acid 98.8 1.5E-08 3.1E-13 88.5 7.3 139 36-179 1767-1911(2376)
288 PLN00016 RNA-binding protein; 98.7 1.2E-07 2.5E-12 75.9 10.7 82 35-120 50-139 (378)
289 PF08643 DUF1776: Fungal famil 98.7 6.4E-07 1.4E-11 68.9 13.5 122 36-161 2-143 (299)
290 TIGR00521 coaBC_dfp phosphopan 98.7 9.4E-08 2E-12 76.5 8.9 80 35-126 183-280 (390)
291 PRK06732 phosphopantothenate-- 98.7 2.4E-07 5.2E-12 69.2 9.6 97 39-145 17-115 (229)
292 COG1090 Predicted nucleoside-d 98.6 5.7E-07 1.2E-11 67.8 9.9 114 40-177 1-114 (297)
293 TIGR03443 alpha_am_amid L-amin 98.6 1.1E-06 2.5E-11 80.7 13.9 123 36-175 970-1111(1389)
294 KOG1429 dTDP-glucose 4-6-dehyd 98.6 3.3E-07 7.1E-12 69.3 7.6 119 34-174 24-142 (350)
295 COG1748 LYS9 Saccharopine dehy 98.6 4.9E-07 1.1E-11 71.9 9.0 78 38-123 2-80 (389)
296 COG3320 Putative dehydrogenase 98.5 2.3E-06 4.9E-11 67.2 12.2 121 38-175 1-137 (382)
297 PF01488 Shikimate_DH: Shikima 98.5 1.3E-06 2.9E-11 59.9 8.9 79 34-124 9-88 (135)
298 PF03435 Saccharop_dh: Sacchar 98.4 1.5E-06 3.2E-11 69.8 9.2 76 40-122 1-78 (386)
299 PRK09620 hypothetical protein; 98.4 5.3E-07 1.1E-11 67.3 5.6 83 35-123 1-99 (229)
300 COG0702 Predicted nucleoside-d 98.4 4.5E-06 9.8E-11 63.4 10.6 75 38-123 1-75 (275)
301 KOG1221 Acyl-CoA reductase [Li 98.4 4.2E-06 9.1E-11 67.9 10.0 126 34-175 9-157 (467)
302 PF05368 NmrA: NmrA-like famil 98.4 2.8E-06 6.2E-11 63.3 8.5 76 40-123 1-76 (233)
303 PRK14106 murD UDP-N-acetylmura 98.4 3.1E-06 6.6E-11 69.3 9.3 78 34-123 2-80 (450)
304 PRK14982 acyl-ACP reductase; P 98.3 6E-06 1.3E-10 64.9 9.5 74 34-123 152-227 (340)
305 COG2910 Putative NADH-flavin r 98.3 1.4E-05 3.1E-10 56.9 9.5 74 38-123 1-74 (211)
306 PTZ00325 malate dehydrogenase; 98.2 1.3E-05 2.9E-10 62.7 9.3 118 36-174 7-126 (321)
307 COG4982 3-oxoacyl-[acyl-carrie 98.1 0.00022 4.8E-09 59.5 15.3 126 30-156 389-537 (866)
308 PLN00106 malate dehydrogenase 98.1 2.3E-05 5E-10 61.4 8.6 105 35-153 16-122 (323)
309 KOG2733 Uncharacterized membra 98.1 2.6E-05 5.6E-10 60.9 8.3 81 39-123 7-95 (423)
310 cd01065 NAD_bind_Shikimate_DH 98.0 5.2E-05 1.1E-09 52.9 9.0 76 35-123 17-93 (155)
311 KOG2865 NADH:ubiquinone oxidor 98.0 4E-05 8.7E-10 58.3 8.3 120 35-175 59-179 (391)
312 KOG1203 Predicted dehydrogenas 98.0 3.8E-05 8.1E-10 61.5 8.6 127 35-177 77-205 (411)
313 KOG0747 Putative NAD+-dependen 98.0 1.2E-05 2.7E-10 60.9 5.5 124 38-174 7-133 (331)
314 KOG1372 GDP-mannose 4,6 dehydr 97.9 3.6E-05 7.9E-10 57.4 6.5 112 37-153 28-144 (376)
315 PLN02520 bifunctional 3-dehydr 97.9 8.4E-05 1.8E-09 62.1 9.1 47 34-81 376-422 (529)
316 TIGR00507 aroE shikimate 5-deh 97.9 0.00018 3.8E-09 55.1 10.0 76 35-123 115-190 (270)
317 cd01336 MDH_cytoplasmic_cytoso 97.9 4.5E-05 9.7E-10 59.9 6.5 116 39-172 4-128 (325)
318 PRK02472 murD UDP-N-acetylmura 97.8 5.2E-05 1.1E-09 62.0 6.9 80 34-124 2-81 (447)
319 TIGR00518 alaDH alanine dehydr 97.8 0.00087 1.9E-08 53.7 13.4 76 35-121 165-240 (370)
320 PRK12549 shikimate 5-dehydroge 97.8 0.00017 3.6E-09 55.7 8.4 76 34-119 124-200 (284)
321 TIGR01809 Shik-DH-AROM shikima 97.8 0.00019 4.1E-09 55.3 8.7 79 35-123 123-202 (282)
322 PRK14027 quinate/shikimate deh 97.8 0.00057 1.2E-08 52.7 11.0 80 35-122 125-205 (283)
323 COG0169 AroE Shikimate 5-dehyd 97.8 0.00021 4.5E-09 54.9 8.4 79 34-123 123-202 (283)
324 COG0604 Qor NADPH:quinone redu 97.7 0.0011 2.5E-08 52.1 12.5 76 37-120 143-220 (326)
325 PRK12475 thiamine/molybdopteri 97.7 0.00049 1.1E-08 54.4 10.3 72 33-106 20-114 (338)
326 cd05291 HicDH_like L-2-hydroxy 97.7 0.0011 2.3E-08 51.8 12.1 112 38-172 1-117 (306)
327 KOG1198 Zinc-binding oxidoredu 97.7 0.0004 8.7E-09 55.1 9.6 79 35-121 156-235 (347)
328 cd08293 PTGR2 Prostaglandin re 97.7 0.00036 7.9E-09 54.9 9.2 43 37-79 155-198 (345)
329 PRK12749 quinate/shikimate deh 97.7 0.00076 1.7E-08 52.2 10.4 82 34-121 121-206 (288)
330 TIGR02356 adenyl_thiF thiazole 97.6 0.00072 1.6E-08 49.6 9.7 83 33-120 17-120 (202)
331 COG2130 Putative NADP-dependen 97.6 0.00093 2E-08 51.4 10.2 78 36-121 150-229 (340)
332 PRK00258 aroE shikimate 5-dehy 97.6 0.00019 4.2E-09 55.2 6.7 76 34-122 120-196 (278)
333 COG0569 TrkA K+ transport syst 97.6 0.00063 1.4E-08 50.7 9.2 75 38-120 1-75 (225)
334 PRK13940 glutamyl-tRNA reducta 97.6 0.00044 9.6E-09 56.1 8.9 76 34-123 178-254 (414)
335 KOG1431 GDP-L-fucose synthetas 97.6 0.00025 5.5E-09 52.3 6.5 84 37-143 1-88 (315)
336 TIGR02853 spore_dpaA dipicolin 97.6 0.00052 1.1E-08 53.1 8.6 72 33-120 147-218 (287)
337 TIGR02825 B4_12hDH leukotriene 97.6 0.00081 1.7E-08 52.6 9.8 42 36-77 138-179 (325)
338 PF04127 DFP: DNA / pantothena 97.6 0.00056 1.2E-08 49.4 8.0 76 36-123 2-94 (185)
339 cd08295 double_bond_reductase_ 97.6 0.00097 2.1E-08 52.4 9.9 43 36-78 151-193 (338)
340 cd01075 NAD_bind_Leu_Phe_Val_D 97.5 0.00032 6.9E-09 51.4 6.5 48 32-80 23-70 (200)
341 cd08259 Zn_ADH5 Alcohol dehydr 97.5 0.0011 2.3E-08 51.6 9.7 75 36-121 162-236 (332)
342 PLN03154 putative allyl alcoho 97.5 0.0012 2.6E-08 52.3 10.0 42 36-77 158-199 (348)
343 COG1064 AdhP Zn-dependent alco 97.5 0.0013 2.7E-08 51.8 9.8 41 36-77 166-206 (339)
344 TIGR01758 MDH_euk_cyt malate d 97.5 0.0011 2.4E-08 52.1 9.5 99 39-160 1-114 (324)
345 COG3268 Uncharacterized conser 97.5 0.00044 9.6E-09 53.7 6.9 78 37-123 6-83 (382)
346 PRK00066 ldh L-lactate dehydro 97.5 0.0051 1.1E-07 48.2 13.1 77 36-123 5-85 (315)
347 cd05276 p53_inducible_oxidored 97.5 0.00093 2E-08 51.4 8.8 78 36-121 139-218 (323)
348 cd08266 Zn_ADH_like1 Alcohol d 97.5 0.0014 3.1E-08 50.9 10.0 77 36-120 166-244 (342)
349 PRK05086 malate dehydrogenase; 97.5 0.00078 1.7E-08 52.7 8.2 101 38-152 1-104 (312)
350 cd08294 leukotriene_B4_DH_like 97.4 0.0012 2.7E-08 51.4 9.1 42 36-77 143-184 (329)
351 PRK07688 thiamine/molybdopteri 97.4 0.0021 4.6E-08 50.9 10.4 37 34-71 21-58 (339)
352 PF02826 2-Hacid_dh_C: D-isome 97.4 0.0012 2.5E-08 47.4 8.2 47 28-75 27-73 (178)
353 cd00704 MDH Malate dehydrogena 97.4 0.0018 3.9E-08 50.9 9.8 108 39-172 2-126 (323)
354 PRK14968 putative methyltransf 97.4 0.0053 1.2E-07 43.9 11.4 78 36-123 23-102 (188)
355 PF00899 ThiF: ThiF family; I 97.4 0.0042 9.1E-08 42.4 10.3 79 37-120 2-101 (135)
356 PF00056 Ldh_1_N: lactate/mala 97.4 0.0069 1.5E-07 41.8 11.3 112 39-172 2-118 (141)
357 cd08253 zeta_crystallin Zeta-c 97.4 0.0016 3.6E-08 50.1 9.1 78 36-121 144-223 (325)
358 TIGR00715 precor6x_red precorr 97.3 0.00076 1.7E-08 51.2 6.6 75 38-121 1-75 (256)
359 PRK06849 hypothetical protein; 97.3 0.0029 6.2E-08 51.0 10.3 79 36-120 3-85 (389)
360 PRK14192 bifunctional 5,10-met 97.3 0.0011 2.3E-08 51.2 7.3 43 32-74 154-196 (283)
361 PRK08306 dipicolinate synthase 97.3 0.002 4.3E-08 50.1 8.8 41 33-74 148-188 (296)
362 cd05188 MDR Medium chain reduc 97.3 0.0022 4.7E-08 48.2 8.9 77 36-121 134-211 (271)
363 PRK08762 molybdopterin biosynt 97.3 0.003 6.5E-08 50.7 10.0 36 34-70 132-168 (376)
364 cd05288 PGDH Prostaglandin deh 97.2 0.0028 6E-08 49.4 9.0 42 36-77 145-186 (329)
365 PRK08644 thiamine biosynthesis 97.2 0.0054 1.2E-07 45.3 10.0 81 34-119 25-125 (212)
366 PRK09880 L-idonate 5-dehydroge 97.2 0.0027 5.8E-08 50.2 8.9 76 36-121 169-245 (343)
367 PRK00045 hemA glutamyl-tRNA re 97.2 0.0028 6E-08 51.7 9.1 45 35-80 180-225 (423)
368 cd00757 ThiF_MoeB_HesA_family 97.2 0.0055 1.2E-07 45.8 10.0 81 34-119 18-119 (228)
369 TIGR01035 hemA glutamyl-tRNA r 97.2 0.003 6.5E-08 51.4 9.2 45 35-80 178-223 (417)
370 cd01080 NAD_bind_m-THF_DH_Cycl 97.2 0.0012 2.7E-08 46.9 6.1 43 33-75 40-82 (168)
371 PRK09496 trkA potassium transp 97.2 0.0028 6.1E-08 51.9 9.0 71 39-118 2-72 (453)
372 PRK09424 pntA NAD(P) transhydr 97.2 0.0065 1.4E-07 50.6 11.0 42 35-77 163-204 (509)
373 TIGR02354 thiF_fam2 thiamine b 97.2 0.0069 1.5E-07 44.4 10.0 37 33-70 17-54 (200)
374 PRK04148 hypothetical protein; 97.1 0.0016 3.5E-08 44.4 5.8 56 36-100 16-71 (134)
375 KOG1196 Predicted NAD-dependen 97.1 0.0076 1.6E-07 46.4 9.9 79 36-121 153-233 (343)
376 TIGR02824 quinone_pig3 putativ 97.1 0.0037 8E-08 48.2 8.7 77 36-120 139-217 (325)
377 COG0373 HemA Glutamyl-tRNA red 97.1 0.0046 1E-07 49.9 9.0 47 35-82 176-223 (414)
378 cd01487 E1_ThiF_like E1_ThiF_l 97.1 0.0089 1.9E-07 42.8 9.7 76 39-119 1-96 (174)
379 PLN00203 glutamyl-tRNA reducta 97.1 0.0054 1.2E-07 51.2 9.4 46 35-81 264-310 (519)
380 PRK05597 molybdopterin biosynt 97.1 0.01 2.2E-07 47.3 10.6 81 34-119 25-126 (355)
381 PF02254 TrkA_N: TrkA-N domain 97.1 0.0046 9.9E-08 40.8 7.4 71 40-120 1-71 (116)
382 PRK09310 aroDE bifunctional 3- 97.0 0.002 4.3E-08 53.4 6.7 72 34-121 329-400 (477)
383 cd08289 MDR_yhfp_like Yhfp put 97.0 0.0056 1.2E-07 47.6 9.0 42 36-77 146-187 (326)
384 PRK05690 molybdopterin biosynt 97.0 0.013 2.8E-07 44.3 10.5 37 33-70 28-65 (245)
385 TIGR01470 cysG_Nterm siroheme 97.0 0.0092 2E-07 43.9 9.5 40 32-72 4-43 (205)
386 cd05213 NAD_bind_Glutamyl_tRNA 97.0 0.0055 1.2E-07 47.9 8.8 72 35-121 176-248 (311)
387 cd08268 MDR2 Medium chain dehy 97.0 0.0059 1.3E-07 47.1 9.0 42 36-77 144-185 (328)
388 PRK05600 thiamine biosynthesis 97.0 0.013 2.8E-07 47.1 10.6 36 34-70 38-74 (370)
389 PRK13982 bifunctional SbtC-lik 97.0 0.0059 1.3E-07 50.3 8.8 78 34-123 253-346 (475)
390 PRK08223 hypothetical protein; 97.0 0.008 1.7E-07 46.4 9.0 36 34-70 24-60 (287)
391 cd00650 LDH_MDH_like NAD-depen 97.0 0.0065 1.4E-07 46.3 8.6 79 40-124 1-83 (263)
392 PTZ00117 malate dehydrogenase; 97.0 0.0086 1.9E-07 47.0 9.3 78 36-123 4-85 (319)
393 TIGR02355 moeB molybdopterin s 96.9 0.014 3.1E-07 43.9 10.0 37 34-71 21-58 (240)
394 cd08244 MDR_enoyl_red Possible 96.9 0.0084 1.8E-07 46.5 9.1 77 36-120 142-220 (324)
395 cd08239 THR_DH_like L-threonin 96.9 0.0078 1.7E-07 47.2 9.0 40 36-76 163-203 (339)
396 cd05294 LDH-like_MDH_nadp A la 96.9 0.01 2.3E-07 46.4 9.3 115 38-173 1-122 (309)
397 cd08292 ETR_like_2 2-enoyl thi 96.9 0.0079 1.7E-07 46.7 8.7 42 36-77 139-180 (324)
398 PF12242 Eno-Rase_NADH_b: NAD( 96.9 0.0013 2.7E-08 40.0 3.1 34 36-70 37-73 (78)
399 PRK08328 hypothetical protein; 96.9 0.022 4.7E-07 42.7 10.4 37 33-70 23-60 (231)
400 cd08250 Mgc45594_like Mgc45594 96.9 0.01 2.2E-07 46.2 9.1 42 36-77 139-180 (329)
401 PF02737 3HCDH_N: 3-hydroxyacy 96.9 0.0045 9.9E-08 44.5 6.5 43 39-82 1-43 (180)
402 cd08243 quinone_oxidoreductase 96.8 0.014 3.1E-07 44.9 9.6 40 36-75 142-181 (320)
403 cd01483 E1_enzyme_family Super 96.8 0.028 6.2E-07 38.6 10.1 77 39-120 1-98 (143)
404 KOG0023 Alcohol dehydrogenase, 96.8 0.012 2.5E-07 45.9 8.6 74 36-117 181-256 (360)
405 KOG4039 Serine/threonine kinas 96.8 0.0059 1.3E-07 43.6 6.5 80 33-123 14-95 (238)
406 PRK03562 glutathione-regulated 96.8 0.022 4.7E-07 48.8 11.0 60 37-104 400-459 (621)
407 PRK15116 sulfur acceptor prote 96.8 0.027 5.8E-07 43.2 10.3 37 33-70 26-63 (268)
408 PTZ00082 L-lactate dehydrogena 96.8 0.055 1.2E-06 42.6 12.4 80 35-124 4-87 (321)
409 cd05212 NAD_bind_m-THF_DH_Cycl 96.8 0.0048 1E-07 42.5 5.7 45 32-76 23-67 (140)
410 PRK10669 putative cation:proto 96.8 0.0064 1.4E-07 51.4 7.6 71 38-118 418-488 (558)
411 PRK14175 bifunctional 5,10-met 96.8 0.0053 1.1E-07 47.3 6.4 43 33-75 154-196 (286)
412 PLN02740 Alcohol dehydrogenase 96.7 0.014 3.1E-07 46.7 9.2 41 36-77 198-239 (381)
413 COG0111 SerA Phosphoglycerate 96.7 0.014 2.9E-07 46.0 8.7 83 34-119 139-233 (324)
414 TIGR01915 npdG NADPH-dependent 96.7 0.0057 1.2E-07 45.3 6.4 41 39-79 2-42 (219)
415 cd08281 liver_ADH_like1 Zinc-d 96.7 0.012 2.7E-07 46.9 8.7 76 36-120 191-268 (371)
416 cd08241 QOR1 Quinone oxidoredu 96.7 0.016 3.5E-07 44.5 9.0 41 36-76 139-179 (323)
417 PF01113 DapB_N: Dihydrodipico 96.7 0.017 3.8E-07 38.8 8.0 74 39-121 2-101 (124)
418 COG1052 LdhA Lactate dehydroge 96.7 0.023 4.9E-07 44.8 9.7 84 33-119 142-236 (324)
419 PLN02586 probable cinnamyl alc 96.7 0.026 5.5E-07 45.0 10.2 39 36-75 183-221 (360)
420 PLN02819 lysine-ketoglutarate 96.7 0.014 3.1E-07 52.4 9.2 77 36-121 568-658 (1042)
421 cd05282 ETR_like 2-enoyl thioe 96.7 0.014 3E-07 45.2 8.4 41 36-76 138-178 (323)
422 PF00107 ADH_zinc_N: Zinc-bind 96.7 0.021 4.6E-07 38.3 8.3 65 48-120 1-67 (130)
423 cd01485 E1-1_like Ubiquitin ac 96.7 0.041 8.9E-07 40.2 10.3 36 34-70 16-52 (198)
424 cd05286 QOR2 Quinone oxidoredu 96.6 0.016 3.4E-07 44.5 8.5 41 36-76 136-176 (320)
425 PRK14194 bifunctional 5,10-met 96.6 0.005 1.1E-07 47.8 5.5 44 32-75 154-197 (301)
426 KOG1197 Predicted quinone oxid 96.6 0.099 2.1E-06 39.7 12.1 76 36-119 146-223 (336)
427 PRK09496 trkA potassium transp 96.6 0.012 2.6E-07 48.2 8.2 64 35-104 229-292 (453)
428 PF13241 NAD_binding_7: Putati 96.6 0.00084 1.8E-08 43.8 1.1 38 33-71 3-40 (103)
429 TIGR03366 HpnZ_proposed putati 96.6 0.052 1.1E-06 41.6 11.1 39 36-75 120-159 (280)
430 TIGR00561 pntA NAD(P) transhyd 96.6 0.052 1.1E-06 45.3 11.7 42 35-77 162-203 (511)
431 PRK03659 glutathione-regulated 96.6 0.038 8.2E-07 47.2 11.2 60 37-104 400-459 (601)
432 cd08291 ETR_like_1 2-enoyl thi 96.6 0.021 4.7E-07 44.5 9.2 76 37-120 144-221 (324)
433 cd08297 CAD3 Cinnamyl alcohol 96.6 0.023 4.9E-07 44.6 9.3 41 36-76 165-205 (341)
434 cd01489 Uba2_SUMO Ubiquitin ac 96.6 0.024 5.1E-07 44.4 9.1 77 39-119 1-98 (312)
435 PRK08410 2-hydroxyacid dehydro 96.6 0.017 3.6E-07 45.3 8.3 84 33-119 141-232 (311)
436 PRK06718 precorrin-2 dehydroge 96.6 0.029 6.3E-07 41.1 9.0 40 31-71 4-43 (202)
437 TIGR03451 mycoS_dep_FDH mycoth 96.6 0.021 4.5E-07 45.3 9.0 41 36-77 176-217 (358)
438 PRK12480 D-lactate dehydrogena 96.6 0.07 1.5E-06 42.2 11.7 65 33-98 142-210 (330)
439 PF02882 THF_DHG_CYH_C: Tetrah 96.6 0.0053 1.2E-07 43.3 4.8 45 32-76 31-75 (160)
440 PRK13243 glyoxylate reductase; 96.5 0.025 5.5E-07 44.7 9.1 40 33-73 146-185 (333)
441 PRK12550 shikimate 5-dehydroge 96.5 0.0083 1.8E-07 46.1 6.2 43 37-80 122-165 (272)
442 cd08290 ETR 2-enoyl thioester 96.5 0.016 3.5E-07 45.4 8.1 36 36-71 146-181 (341)
443 cd01492 Aos1_SUMO Ubiquitin ac 96.5 0.034 7.4E-07 40.6 9.2 38 32-70 16-54 (197)
444 PLN02178 cinnamyl-alcohol dehy 96.5 0.026 5.6E-07 45.3 9.3 37 36-73 178-214 (375)
445 PRK01438 murD UDP-N-acetylmura 96.5 0.022 4.8E-07 47.1 9.2 77 35-124 14-91 (480)
446 PF00670 AdoHcyase_NAD: S-aden 96.5 0.0091 2E-07 42.1 5.8 42 32-74 18-59 (162)
447 KOG0069 Glyoxylate/hydroxypyru 96.5 0.023 4.9E-07 44.7 8.6 86 33-119 158-253 (336)
448 cd08230 glucose_DH Glucose deh 96.5 0.024 5.2E-07 44.9 9.0 34 36-70 172-205 (355)
449 TIGR02818 adh_III_F_hyde S-(hy 96.5 0.024 5.2E-07 45.2 9.0 41 36-77 185-226 (368)
450 COG2227 UbiG 2-polyprenyl-3-me 96.5 0.016 3.4E-07 43.4 7.2 75 35-119 58-132 (243)
451 PRK15469 ghrA bifunctional gly 96.5 0.038 8.3E-07 43.3 9.7 39 33-72 132-170 (312)
452 PLN02602 lactate dehydrogenase 96.5 0.17 3.7E-06 40.4 13.4 76 38-123 38-117 (350)
453 PRK06487 glycerate dehydrogena 96.5 0.011 2.4E-07 46.4 6.5 64 34-100 145-211 (317)
454 cd05311 NAD_bind_2_malic_enz N 96.4 0.018 4E-07 42.9 7.5 36 34-70 22-60 (226)
455 TIGR03736 PRTRC_ThiF PRTRC sys 96.4 0.052 1.1E-06 41.0 9.9 36 35-71 9-55 (244)
456 PLN02928 oxidoreductase family 96.4 0.03 6.6E-07 44.5 9.0 38 33-71 155-192 (347)
457 cd00755 YgdL_like Family of ac 96.4 0.045 9.7E-07 41.0 9.5 82 34-119 8-110 (231)
458 TIGR03201 dearomat_had 6-hydro 96.4 0.046 1E-06 43.2 10.1 41 36-77 166-206 (349)
459 cd08231 MDR_TM0436_like Hypoth 96.4 0.048 1E-06 43.2 10.2 39 36-75 177-216 (361)
460 cd08277 liver_alcohol_DH_like 96.4 0.04 8.6E-07 43.9 9.7 41 36-77 184-225 (365)
461 cd05293 LDH_1 A subgroup of L- 96.4 0.24 5.1E-06 38.9 13.7 113 38-172 4-120 (312)
462 PTZ00075 Adenosylhomocysteinas 96.4 0.029 6.3E-07 46.3 8.9 41 33-74 250-290 (476)
463 PTZ00354 alcohol dehydrogenase 96.4 0.032 6.8E-07 43.4 8.9 42 36-77 140-181 (334)
464 cd08238 sorbose_phosphate_red 96.4 0.043 9.3E-07 44.5 9.9 43 36-78 175-220 (410)
465 cd01484 E1-2_like Ubiquitin ac 96.4 0.053 1.2E-06 40.7 9.6 77 39-119 1-99 (234)
466 PLN00112 malate dehydrogenase 96.4 0.097 2.1E-06 43.0 11.7 101 39-159 102-214 (444)
467 PRK13771 putative alcohol dehy 96.4 0.042 9.1E-07 42.9 9.5 42 36-77 162-203 (334)
468 cd08296 CAD_like Cinnamyl alco 96.4 0.035 7.6E-07 43.5 9.0 41 36-77 163-203 (333)
469 TIGR02817 adh_fam_1 zinc-bindi 96.3 0.041 8.9E-07 43.0 9.3 41 37-77 149-190 (336)
470 cd08233 butanediol_DH_like (2R 96.3 0.035 7.7E-07 43.8 8.9 76 36-120 172-250 (351)
471 PRK14851 hypothetical protein; 96.3 0.052 1.1E-06 46.9 10.4 81 34-119 40-141 (679)
472 PRK14191 bifunctional 5,10-met 96.3 0.017 3.6E-07 44.6 6.6 43 33-75 153-195 (285)
473 cd00300 LDH_like L-lactate deh 96.3 0.075 1.6E-06 41.4 10.3 111 40-172 1-115 (300)
474 TIGR01759 MalateDH-SF1 malate 96.3 0.048 1E-06 42.9 9.3 116 39-172 5-129 (323)
475 cd08274 MDR9 Medium chain dehy 96.3 0.054 1.2E-06 42.6 9.7 36 36-71 177-212 (350)
476 PRK10309 galactitol-1-phosphat 96.3 0.047 1E-06 43.0 9.4 40 36-76 160-200 (347)
477 PRK07411 hypothetical protein; 96.3 0.055 1.2E-06 43.8 9.8 36 34-70 35-71 (390)
478 PRK10754 quinone oxidoreductas 96.3 0.037 8E-07 43.1 8.6 41 36-76 140-180 (327)
479 PF01262 AlaDh_PNT_C: Alanine 96.3 0.015 3.2E-07 41.3 5.8 42 35-77 18-59 (168)
480 cd05191 NAD_bind_amino_acid_DH 96.3 0.03 6.6E-07 35.0 6.6 36 33-69 19-55 (86)
481 cd08248 RTN4I1 Human Reticulon 96.3 0.056 1.2E-06 42.4 9.7 75 36-120 162-236 (350)
482 cd05280 MDR_yhdh_yhfp Yhdh and 96.3 0.046 9.9E-07 42.4 9.1 40 37-76 147-186 (325)
483 COG0039 Mdh Malate/lactate deh 96.3 0.033 7.1E-07 43.5 8.0 93 38-146 1-98 (313)
484 PRK07878 molybdopterin biosynt 96.3 0.065 1.4E-06 43.4 10.1 36 34-70 39-75 (392)
485 PF12076 Wax2_C: WAX2 C-termin 96.2 0.013 2.8E-07 40.8 5.2 42 40-83 1-42 (164)
486 cd00401 AdoHcyase S-adenosyl-L 96.2 0.015 3.3E-07 47.2 6.4 42 34-76 199-240 (413)
487 PRK14188 bifunctional 5,10-met 96.2 0.012 2.6E-07 45.6 5.5 39 33-71 154-193 (296)
488 cd05290 LDH_3 A subgroup of L- 96.2 0.35 7.6E-06 37.9 13.7 104 39-161 1-110 (307)
489 PRK06223 malate dehydrogenase; 96.2 0.13 2.8E-06 40.1 11.3 76 38-123 3-82 (307)
490 cd08300 alcohol_DH_class_III c 96.2 0.07 1.5E-06 42.6 10.0 76 36-120 186-265 (368)
491 PRK06932 glycerate dehydrogena 96.2 0.032 7E-07 43.7 7.9 83 34-119 144-233 (314)
492 PRK08655 prephenate dehydrogen 96.2 0.015 3.2E-07 47.7 6.2 38 39-76 2-39 (437)
493 cd08246 crotonyl_coA_red croto 96.2 0.054 1.2E-06 43.5 9.4 42 36-77 193-234 (393)
494 PRK15409 bifunctional glyoxyla 96.2 0.071 1.5E-06 42.0 9.8 83 34-119 142-236 (323)
495 PF03807 F420_oxidored: NADP o 96.2 0.025 5.4E-07 35.9 6.1 41 40-81 2-46 (96)
496 PRK07530 3-hydroxybutyryl-CoA 96.2 0.024 5.2E-07 43.9 7.0 42 37-79 4-45 (292)
497 cd08299 alcohol_DH_class_I_II_ 96.2 0.056 1.2E-06 43.3 9.3 41 36-77 190-231 (373)
498 PRK07574 formate dehydrogenase 96.2 0.055 1.2E-06 43.7 9.1 38 33-71 188-225 (385)
499 PRK06719 precorrin-2 dehydroge 96.2 0.01 2.2E-07 41.8 4.4 39 30-69 6-44 (157)
500 cd01338 MDH_choloroplast_like 96.2 0.024 5.3E-07 44.6 7.0 114 38-172 3-128 (322)
No 1
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.4e-32 Score=203.83 Aligned_cols=144 Identities=33% Similarity=0.468 Sum_probs=132.6
Q ss_pred CCcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh--
Q 030328 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (179)
Q Consensus 31 ~~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~-- 108 (179)
...+.+|+.+|||||++|+|+++|++|+++|++++++|.+.+..+++.+++... | +++.+.||+++.+++.+..++
T Consensus 32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~-g-~~~~y~cdis~~eei~~~a~~Vk 109 (300)
T KOG1201|consen 32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI-G-EAKAYTCDISDREEIYRLAKKVK 109 (300)
T ss_pred chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc-C-ceeEEEecCCCHHHHHHHHHHHH
Confidence 444579999999999999999999999999999999999999999999988765 3 899999999999998776544
Q ss_pred --hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcccC
Q 030328 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQVG 179 (179)
Q Consensus 109 --~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~g 179 (179)
.|++|++|||||.....++.+.++|++++++++|+.|.++++++++|.|.++++| .||.++|++|..|
T Consensus 110 ~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~G---HIV~IaS~aG~~g 179 (300)
T KOG1201|consen 110 KEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNG---HIVTIASVAGLFG 179 (300)
T ss_pred HhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCc---eEEEehhhhcccC
Confidence 6899999999999999999999999999999999999999999999999998877 9999999999765
No 2
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=100.00 E-value=4.8e-32 Score=198.10 Aligned_cols=139 Identities=37% Similarity=0.506 Sum_probs=127.3
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHH----hh
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD----EA 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~----~~ 109 (179)
.+++|.++|||||+|||.++|++|+++|++|++++|+.+++++...++.. ..+.....|++|.++++..++ ++
T Consensus 3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~---~~~~~~~~DVtD~~~~~~~i~~~~~~~ 79 (246)
T COG4221 3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA---GAALALALDVTDRAAVEAAIEALPEEF 79 (246)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc---CceEEEeeccCCHHHHHHHHHHHHHhh
Confidence 35789999999999999999999999999999999999999998888753 568889999999999766654 57
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|+||||||.....++.+.+.++|++++++|+.|.++.+++++|.|.+++.| .|||+||++|..
T Consensus 80 g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G---~IiN~~SiAG~~ 145 (246)
T COG4221 80 GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSG---HIINLGSIAGRY 145 (246)
T ss_pred CcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCc---eEEEeccccccc
Confidence 899999999999888999999999999999999999999999999999999876 999999999865
No 3
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.8e-32 Score=205.55 Aligned_cols=144 Identities=40% Similarity=0.593 Sum_probs=130.8
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCce-EEEEEeeCCCHHHHHHHHH----
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIE-VATYSADVRDFDAVKTALD---- 107 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-v~~~~~D~~~~~~v~~~~~---- 107 (179)
..+.||+++|||||+|||.++|++|+++|++++++.|+.+++++..+++......+ +..+++|++|.+++++.++
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR 87 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999988887655555 9999999999999988774
Q ss_pred hhCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcccC
Q 030328 108 EAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQVG 179 (179)
Q Consensus 108 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~g 179 (179)
.+|++|+||||||.......++.+.++.+..|++|++|+.+++++++|+|++++.| .||++||++|..+
T Consensus 88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~G---hIVvisSiaG~~~ 156 (282)
T KOG1205|consen 88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDG---HIVVISSIAGKMP 156 (282)
T ss_pred hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCC---eEEEEeccccccC
Confidence 46899999999999887777888999999999999999999999999999999855 9999999999864
No 4
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=100.00 E-value=1.5e-31 Score=200.25 Aligned_cols=143 Identities=40% Similarity=0.559 Sum_probs=133.8
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
.+++++++|||||+|||.++|++|+++|++|+++.|+++++++..+++....+.++..+++|++++++++++.++ .
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 357899999999999999999999999999999999999999999999987889999999999999999887764 2
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcccC
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQVG 179 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~g 179 (179)
.++|+||||||....+++.+.++++.++++++|+.++..+++.++|.|.+++.| .|+||+|.+|..+
T Consensus 83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G---~IiNI~S~ag~~p 149 (265)
T COG0300 83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAG---HIINIGSAAGLIP 149 (265)
T ss_pred CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc---eEEEEechhhcCC
Confidence 579999999999999999999999999999999999999999999999998876 9999999998764
No 5
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.96 E-value=3.4e-27 Score=179.50 Aligned_cols=142 Identities=23% Similarity=0.390 Sum_probs=125.3
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh---hC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---AG 110 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---~~ 110 (179)
++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++....+.++..+.+|++|++++++++++ ++
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g 84 (263)
T PRK08339 5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIG 84 (263)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence 468999999999999999999999999999999999998888777776544456788899999999999887765 47
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.| +||++||.++..
T Consensus 85 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g---~Ii~isS~~~~~ 149 (263)
T PRK08339 85 EPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFG---RIIYSTSVAIKE 149 (263)
T ss_pred CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC---EEEEEcCccccC
Confidence 89999999998777778889999999999999999999999999999876544 999999987654
No 6
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=99.95 E-value=3.7e-27 Score=177.38 Aligned_cols=141 Identities=30% Similarity=0.397 Sum_probs=125.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHH-HHHHHhh--CCC
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAV-KTALDEA--GPV 112 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v-~~~~~~~--~~i 112 (179)
.|++++||||+.|||+++|++||++|.+|++++|++++++.+.+|+....+.++..+.+|+++.+.+ +++.+.. .++
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~V 127 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDV 127 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence 4699999999999999999999999999999999999999999999988889999999999988763 3344433 366
Q ss_pred cEEEecCCCCC--CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcccC
Q 030328 113 DVLVVNQGVFV--PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQVG 179 (179)
Q Consensus 113 d~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~g 179 (179)
.+||||+|... |..+.+.+.+.+++.+.+|..++..+++..+|.|.++++| .|+|+||.+|..+
T Consensus 128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G---~IvnigS~ag~~p 193 (312)
T KOG1014|consen 128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKG---IIVNIGSFAGLIP 193 (312)
T ss_pred EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCc---eEEEecccccccc
Confidence 78999999887 5567788888999999999999999999999999998876 9999999998764
No 7
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.95 E-value=6.1e-26 Score=177.07 Aligned_cols=140 Identities=29% Similarity=0.389 Sum_probs=118.8
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhc-CceEEEEEeeCCC--HHHHHHHHHhhC-
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLAT-GIEVATYSADVRD--FDAVKTALDEAG- 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~--~~~v~~~~~~~~- 110 (179)
..|++++||||++|||+++|++|+++|++|++++|+++++++..+++.... +.++..+.+|+++ .+.++++.+..+
T Consensus 51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 469999999999999999999999999999999999999988888876543 3577888999985 455566666554
Q ss_pred -CCcEEEecCCCCCC--CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 111 -PVDVLVVNQGVFVP--GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 111 -~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
++|++|||||...+ .++.+.+++++++.+++|+.|++.+++.++|.|.+++.| +||++||.+|.
T Consensus 131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g---~IV~iSS~a~~ 197 (320)
T PLN02780 131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKG---AIINIGSGAAI 197 (320)
T ss_pred CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCc---EEEEEechhhc
Confidence 46699999998653 457788999999999999999999999999999887654 99999998874
No 8
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.95 E-value=6.2e-26 Score=177.63 Aligned_cols=142 Identities=37% Similarity=0.488 Sum_probs=126.2
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
..+++|+++||||++|||++++++|+++|++|++++|+++.+++..+++.. .+.++..+.+|++|.++++++++.
T Consensus 3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (330)
T PRK06139 3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRA-LGAEVLVVPTDVTDADQVKALATQAASF 81 (330)
T ss_pred cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence 356899999999999999999999999999999999999988888777754 366788889999999999887754
Q ss_pred hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||....+++.+.+.+++++.+++|+.+++++++.++|.|++++.+ .||++||..+..
T Consensus 82 ~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g---~iV~isS~~~~~ 148 (330)
T PRK06139 82 GGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHG---IFINMISLGGFA 148 (330)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCC---EEEEEcChhhcC
Confidence 4789999999998888888899999999999999999999999999999887654 999999987754
No 9
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=99.95 E-value=2.5e-26 Score=162.10 Aligned_cols=143 Identities=31% Similarity=0.387 Sum_probs=124.8
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
.++.|.++|||+++|||+++++.|++.|++|.+.|++....+++...+..- .+...+.||+++.++++..+++ .
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~--~~h~aF~~DVS~a~~v~~~l~e~~k~~ 88 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY--GDHSAFSCDVSKAHDVQNTLEEMEKSL 88 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC--CccceeeeccCcHHHHHHHHHHHHHhc
Confidence 357899999999999999999999999999999999988888777766421 3556789999999998776654 5
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcccC
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQVG 179 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~g 179 (179)
+++++++||||...+..+..++.++|++.+.+|+.|.|.++|++.+.|...+. .+.+|||+||+.|.+|
T Consensus 89 g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~-~~~sIiNvsSIVGkiG 157 (256)
T KOG1200|consen 89 GTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQ-QGLSIINVSSIVGKIG 157 (256)
T ss_pred CCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcC-CCceEEeehhhhcccc
Confidence 89999999999999999999999999999999999999999999998766554 3569999999999876
No 10
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.95 E-value=1e-25 Score=171.28 Aligned_cols=144 Identities=28% Similarity=0.348 Sum_probs=125.4
Q ss_pred CcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhc-CceEEEEEeeCCCHHHHHHHHHh--
Q 030328 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE-- 108 (179)
Q Consensus 32 ~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~v~~~~~~-- 108 (179)
..++++|+++||||++|||+++|++|+++|++|++++|++++.++..+++.... +.++..+.+|++|.+++++++++
T Consensus 3 ~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T PRK07062 3 QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE 82 (265)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence 345789999999999999999999999999999999999988877777665443 34788899999999998887654
Q ss_pred --hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 --~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.+ +|+++||.++..
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g---~iv~isS~~~~~ 151 (265)
T PRK07062 83 ARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAA---SIVCVNSLLALQ 151 (265)
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCc---EEEEeccccccC
Confidence 5789999999998777788888999999999999999999999999999876544 999999988754
No 11
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.94 E-value=2.1e-25 Score=169.07 Aligned_cols=143 Identities=30% Similarity=0.458 Sum_probs=127.2
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCC
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~i 112 (179)
+++++|+++|||+++|||++++++|+++|++|++++|++++.++..+++....+.++..+.+|+++++++++++++++++
T Consensus 3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i 82 (259)
T PRK06125 3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDI 82 (259)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCC
Confidence 45689999999999999999999999999999999999888877777776544567888999999999999999988899
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
|++|||+|.....++.+.+.++|+.++++|+.+++.+++.++|.|.+++.+ +|+++||..+..
T Consensus 83 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g---~iv~iss~~~~~ 145 (259)
T PRK06125 83 DILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSG---VIVNVIGAAGEN 145 (259)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc---EEEEecCccccC
Confidence 999999998777788889999999999999999999999999999876544 899999987653
No 12
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.94 E-value=1.7e-25 Score=169.57 Aligned_cols=142 Identities=30% Similarity=0.398 Sum_probs=122.9
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhh-cCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLA-TGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
.+++|+++||||++|||++++++|+++|++|++++|++++.++..+++... .+.++..+.+|+++++++++++++
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA 83 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999999998888777776532 355688899999999998877664
Q ss_pred hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||.....+..+.+.++|++.+++|+.+++.++++++|.|.+++. ++||++||..+..
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~---g~iv~isS~~~~~ 150 (260)
T PRK07063 84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGR---GSIVNIASTHAFK 150 (260)
T ss_pred hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCC---eEEEEECChhhcc
Confidence 578999999999876666677889999999999999999999999999987654 3999999987654
No 13
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.94 E-value=2e-25 Score=170.87 Aligned_cols=141 Identities=35% Similarity=0.507 Sum_probs=123.6
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
+++|+++||||++|||+++|++|+++|++|++++|+++.+++..+++.. .+.++..+.+|++|.+++++++++ ++
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRA-EGFDVHGVMCDVRHREEVTHLADEAFRLLG 82 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 6799999999999999999999999999999999999888877766643 255788899999999999887655 47
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|++|||||....+++.+.+.++|+..+++|+.+++.+++.++|.|.+++. .++||++||.++..
T Consensus 83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~--~g~iv~isS~~~~~ 148 (275)
T PRK05876 83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGT--GGHVVFTASFAGLV 148 (275)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--CCEEEEeCChhhcc
Confidence 8999999999887788888999999999999999999999999999977642 24999999987754
No 14
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=99.94 E-value=4.1e-26 Score=164.49 Aligned_cols=138 Identities=28% Similarity=0.446 Sum_probs=121.4
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
+++||++++||+.||||++++++|+++|.++.+++.+.|..+...+--...+...+.++++|+++..++++.+++ +
T Consensus 2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f 81 (261)
T KOG4169|consen 2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF 81 (261)
T ss_pred cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence 468999999999999999999999999999999998888766554433334578899999999999998888776 5
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcccC
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQVG 179 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~g 179 (179)
|.+|++||+||.. ++++|++++.+|+.|.++-++.++|+|.+++.|.++-|||+||++|.-|
T Consensus 82 g~iDIlINgAGi~--------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P 143 (261)
T KOG4169|consen 82 GTIDILINGAGIL--------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDP 143 (261)
T ss_pred CceEEEEcccccc--------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCc
Confidence 8999999999974 4577999999999999999999999999999888899999999998754
No 15
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.94 E-value=3.4e-25 Score=169.47 Aligned_cols=138 Identities=18% Similarity=0.303 Sum_probs=111.9
Q ss_pred CcCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh---
Q 030328 34 PIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (179)
Q Consensus 34 ~~~~k~vlItGa~--~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~--- 108 (179)
.+++|+++||||+ +|||+++|++|+++|++|++++|+++. ++..+++....+.. ..+.+|++|.+++++++++
T Consensus 2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~-~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~ 79 (274)
T PRK08415 2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEAL-KKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKK 79 (274)
T ss_pred ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH-HHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHH
Confidence 3579999999997 899999999999999999999998542 22233332222333 5689999999998887755
Q ss_pred -hCCCcEEEecCCCCCC----CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 -AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 -~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||...+ .++.+.+.++|++.+++|+.+++++++.++|.|+++ + +|+++||.++..
T Consensus 80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~--g---~Iv~isS~~~~~ 149 (274)
T PRK08415 80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG--A---SVLTLSYLGGVK 149 (274)
T ss_pred HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC--C---cEEEEecCCCcc
Confidence 5899999999997642 467788999999999999999999999999999642 3 899999987753
No 16
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.94 E-value=5.8e-25 Score=166.12 Aligned_cols=140 Identities=21% Similarity=0.290 Sum_probs=117.7
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
++++|+++||||++|||+++|++|+++|++|++++|++. ++..+++. ..+.++..+.+|+++++++++++++ +
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12481 5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVE-ALGRKFHFITADLIQQKDIDSIVSQAVEVM 81 (251)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHH-HcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 468999999999999999999999999999999988643 22233332 2356788899999999999888765 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||||.....++.+.++++|++++++|+.+++.+++.+.|.|.+++. .++||++||.++..
T Consensus 82 g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~--~g~ii~isS~~~~~ 148 (251)
T PRK12481 82 GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGN--GGKIINIASMLSFQ 148 (251)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCC--CCEEEEeCChhhcC
Confidence 78999999999887778888999999999999999999999999999976542 24999999987754
No 17
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.94 E-value=4.3e-25 Score=171.88 Aligned_cols=143 Identities=27% Similarity=0.408 Sum_probs=120.9
Q ss_pred CCcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhc-CceEEEEEeeCCCHHHHHHHHHh-
Q 030328 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE- 108 (179)
Q Consensus 31 ~~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~v~~~~~~- 108 (179)
...++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.... +.++.++.+|+++.+++++++++
T Consensus 8 ~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~ 87 (313)
T PRK05854 8 TVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQL 87 (313)
T ss_pred cCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHH
Confidence 3446789999999999999999999999999999999999988887777775433 45688899999999999887765
Q ss_pred ---hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 ---AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 ---~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
.+++|++|||||.... +..+.+.++++..+++|+.|++.+++.++|.|++. . ++||++||.++..
T Consensus 88 ~~~~~~iD~li~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~---~riv~vsS~~~~~ 155 (313)
T PRK05854 88 RAEGRPIHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-R---ARVTSQSSIAARR 155 (313)
T ss_pred HHhCCCccEEEECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-C---CCeEEEechhhcC
Confidence 4789999999998654 33356788999999999999999999999999764 2 3899999987643
No 18
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.94 E-value=5.8e-25 Score=169.15 Aligned_cols=143 Identities=29% Similarity=0.360 Sum_probs=120.7
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh---------hHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHH
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG---------EKLEEAKQSIQLATGIEVATYSADVRDFDAVKTA 105 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~---------~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~ 105 (179)
+++|+++||||++|||+++|++|+++|++|++++++. +..++..+++.. .+.++..+.+|++|.++++++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~~v~~~ 82 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVA-AGGEAVANGDDIADWDGAANL 82 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHh-cCCceEEEeCCCCCHHHHHHH
Confidence 5799999999999999999999999999999998875 556666665543 355678889999999998877
Q ss_pred HHh----hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCC---CCcEEEEecccCccc
Q 030328 106 LDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNG---GPASIALMSSQAGQV 178 (179)
Q Consensus 106 ~~~----~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~~~iv~iss~~g~~ 178 (179)
+++ ++++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|.|+++... ..++||++||.++..
T Consensus 83 ~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~ 162 (286)
T PRK07791 83 VDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ 162 (286)
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc
Confidence 654 5899999999998877778889999999999999999999999999999765321 135899999988754
No 19
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.94 E-value=7.3e-25 Score=165.70 Aligned_cols=142 Identities=24% Similarity=0.379 Sum_probs=121.0
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChh-HHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh---
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGE-KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~--- 108 (179)
+++++|+++|||+++|||+++|++|+++|++|++++|+.+ ..++..+++.. .+.++..+.+|+++++++++++++
T Consensus 4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~ 82 (254)
T PRK06114 4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEA-AGRRAIQIAADVTSKADLRAAVARTEA 82 (254)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999764 34555555543 255678889999999998887655
Q ss_pred -hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 -~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||.....++.+.+.++|++++++|+.+++.+++.++|.|++++.+ +|+++||.++..
T Consensus 83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~iv~isS~~~~~ 150 (254)
T PRK06114 83 ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGG---SIVNIASMSGII 150 (254)
T ss_pred HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCc---EEEEECchhhcC
Confidence 5789999999998877778888999999999999999999999999999876544 999999987754
No 20
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.94 E-value=8.3e-25 Score=169.03 Aligned_cols=140 Identities=31% Similarity=0.477 Sum_probs=121.9
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
.++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.. +.++..+.+|++|.+++++++++
T Consensus 5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 82 (296)
T PRK05872 5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG--DDRVLTVVADVTDLAAMQAAAEEAVER 82 (296)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC--CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999888777666532 34566778999999999887765
Q ss_pred hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||.....++.+.++++|++.+++|+.+++++++.++|.|.++. ++||++||.++..
T Consensus 83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~----g~iv~isS~~~~~ 148 (296)
T PRK05872 83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERR----GYVLQVSSLAAFA 148 (296)
T ss_pred cCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC----CEEEEEeCHhhcC
Confidence 47899999999998878888899999999999999999999999999997743 3899999987754
No 21
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.93 E-value=1.1e-24 Score=170.86 Aligned_cols=141 Identities=38% Similarity=0.480 Sum_probs=124.8
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++.. .+.++..+.+|++|.+++++++++ +
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~-~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRA-AGGEALAVVADVADAEAVQAAADRAEEEL 83 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-cCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence 46789999999999999999999999999999999999888877777653 366788899999999999887654 5
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||||.....++.+.+.+++++.+++|+.+++++++.++|.|++++.+ +||++||..+..
T Consensus 84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g---~iV~isS~~~~~ 149 (334)
T PRK07109 84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRG---AIIQVGSALAYR 149 (334)
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc---EEEEeCChhhcc
Confidence 789999999998777788889999999999999999999999999999886544 999999988754
No 22
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=99.93 E-value=1.3e-24 Score=165.31 Aligned_cols=143 Identities=35% Similarity=0.440 Sum_probs=120.6
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhc--CceEEEEEeeCCCHHHHHHHHH---
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLAT--GIEVATYSADVRDFDAVKTALD--- 107 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~--- 107 (179)
..+.+|+++|||+++|||+++|++|++.|++|++++|+++..++..+++.... +.++..+.+|+++.++++++++
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~ 83 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV 83 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999888887765422 4568899999999888776653
Q ss_pred -h-hCCCcEEEecCCCCCCC-CcccCCHHHHHHHHHhhhhH-HHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 108 -E-AGPVDVLVVNQGVFVPG-ELEVQSLDEVRLMIDVNIIG-SFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 108 -~-~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+ +|++|+||||||..... ++.+.++|+|++++++|+.| .+.+.+.+.|++++.+++ .|+++||.++..
T Consensus 84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg---~I~~~ss~~~~~ 155 (270)
T KOG0725|consen 84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGG---SIVNISSVAGVG 155 (270)
T ss_pred HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCc---eEEEEecccccc
Confidence 4 58999999999988755 68899999999999999995 666677777777665554 999999987763
No 23
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.93 E-value=1.1e-24 Score=164.59 Aligned_cols=141 Identities=28% Similarity=0.416 Sum_probs=122.4
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++... +.++..+.+|+++++++++++++ +
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS-GGKVVPVCCDVSQHQQVTSMLDQVTAEL 84 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 367999999999999999999999999999999999988888777766543 45678899999999998887654 5
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
+++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|.|.+++. .++|+++||.++.
T Consensus 85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~ 150 (253)
T PRK05867 85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQ--GGVIINTASMSGH 150 (253)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCC--CcEEEEECcHHhc
Confidence 79999999999887777888899999999999999999999999999977543 2389999998764
No 24
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.93 E-value=6.4e-25 Score=166.02 Aligned_cols=137 Identities=19% Similarity=0.232 Sum_probs=113.3
Q ss_pred cCcCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh--
Q 030328 33 IPIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (179)
Q Consensus 33 ~~~~~k~vlItGa~--~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~-- 108 (179)
..+++|+++||||+ +|||+++|++|+++|++|++++|+. +.++..+++. +.++..+.+|++|++++++++++
T Consensus 3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~ 78 (252)
T PRK06079 3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV---DEEDLLVECDVASDESIERAFATIK 78 (252)
T ss_pred cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc---cCceeEEeCCCCCHHHHHHHHHHHH
Confidence 44689999999999 7999999999999999999999984 3333333332 34577889999999999887654
Q ss_pred --hCCCcEEEecCCCCCC----CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 --AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 --~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||...+ .++.+.+.++|+..+++|+.+++.+++.++|.|.+ + ++|+++||.++..
T Consensus 79 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~---g~Iv~iss~~~~~ 149 (252)
T PRK06079 79 ERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--G---ASIVTLTYFGSER 149 (252)
T ss_pred HHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--C---ceEEEEeccCccc
Confidence 5899999999997653 56778899999999999999999999999999853 2 3899999987754
No 25
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.93 E-value=2e-24 Score=160.96 Aligned_cols=141 Identities=18% Similarity=0.198 Sum_probs=120.3
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
++++|+++||||++|||+++|++|+++|++|++++|++++.++..+++... +.++..+.+|+++++++++++++ +
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL-TDNVYSFQLKDFSQESIRHLFDAIEQQF 80 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence 468999999999999999999999999999999999998888877776543 55677889999999999887654 4
Q ss_pred C-CCcEEEecCCCC-CCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 110 G-PVDVLVVNQGVF-VPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 110 ~-~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
+ ++|++|||||.. .+.++.+.+.++|++.+++|..+++.+++.++|+|.++++ .+.||++||..+.
T Consensus 81 g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~--~g~Iv~isS~~~~ 148 (227)
T PRK08862 81 NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNK--KGVIVNVISHDDH 148 (227)
T ss_pred CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CceEEEEecCCCC
Confidence 6 899999999854 3457788899999999999999999999999999987542 2499999997654
No 26
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.93 E-value=1.5e-24 Score=163.83 Aligned_cols=140 Identities=31% Similarity=0.410 Sum_probs=121.0
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
.+++|+++||||++|||++++++|+++|++|++++|++++.++..+++.. .+.++..+.+|+++++++++++++ +
T Consensus 3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRA-EGGEAVALAGDVRDEAYAKALVALAVERF 81 (254)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 46789999999999999999999999999999999999888877776653 355788899999999998877654 5
Q ss_pred CCCcEEEecCCCCC-CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 110 GPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 110 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
+++|++|||||... ..++.+.++++|++.+++|+.+++.+++.++|.|++++.+ +|+++||.++.
T Consensus 82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~---~iv~~sS~~~~ 147 (254)
T PRK07478 82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGG---SLIFTSTFVGH 147 (254)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc---eEEEEechHhh
Confidence 78999999999764 3567788999999999999999999999999999876544 89999998764
No 27
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.93 E-value=6.2e-25 Score=169.63 Aligned_cols=140 Identities=32% Similarity=0.508 Sum_probs=123.6
Q ss_pred CcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHh-hcCceEEEEEeeCCCHHHHHHHHHh--
Q 030328 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQL-ATGIEVATYSADVRDFDAVKTALDE-- 108 (179)
Q Consensus 32 ~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~v~~~~~~-- 108 (179)
..+.++++++||||++|||.++|++|+++|++|++.+|+.++.++..+++.. ....++.++.+|+++.+++.++.++
T Consensus 30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~ 109 (314)
T KOG1208|consen 30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK 109 (314)
T ss_pred cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 3457899999999999999999999999999999999999988888888875 3466788899999999999887665
Q ss_pred --hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 109 --~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
.+++|++|||||+..++. ..+.|.++.++.+|..|++.+++.++|.|++... .|||++||..+
T Consensus 110 ~~~~~ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~---~RIV~vsS~~~ 174 (314)
T KOG1208|consen 110 KKEGPLDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAP---SRIVNVSSILG 174 (314)
T ss_pred hcCCCccEEEeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCC---CCEEEEcCccc
Confidence 468999999999987655 5677899999999999999999999999987653 59999999875
No 28
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.93 E-value=1.8e-24 Score=165.10 Aligned_cols=137 Identities=34% Similarity=0.432 Sum_probs=119.8
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
++++++++||||+||||++++++|+++|++|++++|+++..++..+++. ++..+.+|+++++++++++++ +
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-----LVVGGPLDVTDPASFAAFLDAVEADL 76 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-----cceEEEccCCCHHHHHHHHHHHHHHc
Confidence 3578999999999999999999999999999999999887766555442 467789999999998877655 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||||.....++.+.+.+++++++++|+.+++.+++.++|.|.+++.+ +|+++||.++..
T Consensus 77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g---~iv~isS~~~~~ 142 (273)
T PRK07825 77 GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRG---HVVNVASLAGKI 142 (273)
T ss_pred CCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---EEEEEcCccccC
Confidence 789999999999887788888999999999999999999999999999887654 999999998764
No 29
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.93 E-value=1.8e-24 Score=164.11 Aligned_cols=143 Identities=17% Similarity=0.232 Sum_probs=119.1
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh---
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~--- 108 (179)
..+++|+++||||++|||+++|++|+++|++|++++| +++..++..+++....+.++..+.+|++|++++++++++
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE 83 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999998865 555666666666544466788999999999999887765
Q ss_pred -hCCCcEEEecCCCCC------CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 -AGPVDVLVVNQGVFV------PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 -~~~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||... ..++.+.+++++++.+++|+.+++.+++.++|.|++++. ++||++||..+..
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~---g~iv~isS~~~~~ 157 (260)
T PRK08416 84 DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGG---GSIISLSSTGNLV 157 (260)
T ss_pred hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCC---EEEEEEecccccc
Confidence 478999999998642 245667888999999999999999999999999987654 3999999987643
No 30
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.93 E-value=2.6e-24 Score=166.87 Aligned_cols=141 Identities=23% Similarity=0.316 Sum_probs=115.5
Q ss_pred CcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh----------hHHHHHHHHHHhhcCceEEEEEeeCCCHHH
Q 030328 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG----------EKLEEAKQSIQLATGIEVATYSADVRDFDA 101 (179)
Q Consensus 32 ~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~----------~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 101 (179)
..++++|+++||||++|||+++|++|+++|++|++++|+. +..++..+++.. .+.++..+.+|++++++
T Consensus 3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~~ 81 (305)
T PRK08303 3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTA-AGGRGIAVQVDHLVPEQ 81 (305)
T ss_pred CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHh-cCCceEEEEcCCCCHHH
Confidence 3457899999999999999999999999999999999974 344455455533 35567789999999999
Q ss_pred HHHHHHh----hCCCcEEEecC-CCCC----CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEec
Q 030328 102 VKTALDE----AGPVDVLVVNQ-GVFV----PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMS 172 (179)
Q Consensus 102 v~~~~~~----~~~id~li~~a-g~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~is 172 (179)
+++++++ ++++|++|||| |... ..++.+.+.++|++.+++|+.+++.++++++|.|++++.| +||++|
T Consensus 82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g---~IV~is 158 (305)
T PRK08303 82 VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGG---LVVEIT 158 (305)
T ss_pred HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCc---EEEEEC
Confidence 9887765 58899999999 7431 2456678889999999999999999999999999765443 999999
Q ss_pred ccCc
Q 030328 173 SQAG 176 (179)
Q Consensus 173 s~~g 176 (179)
|..+
T Consensus 159 S~~~ 162 (305)
T PRK08303 159 DGTA 162 (305)
T ss_pred Cccc
Confidence 9654
No 31
>PRK08589 short chain dehydrogenase; Validated
Probab=99.93 E-value=3.8e-24 Score=163.40 Aligned_cols=138 Identities=36% Similarity=0.474 Sum_probs=118.4
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
+++|+++||||++|||+++|++|+++|++|++++|+ ++.++..+++.. .+.++..+.+|+++.+++++++++ ++
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKS-NGGKAKAYHVDISDEQQVKDFASEIKEQFG 81 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHh-cCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 579999999999999999999999999999999999 666666666643 355688899999999998877654 57
Q ss_pred CCcEEEecCCCCC-CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 111 PVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 111 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|++|||||... ..++.+.+.+.|++++++|+.+++.++++++|.|++++ + +||++||.++..
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g---~iv~isS~~~~~ 146 (272)
T PRK08589 82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-G---SIINTSSFSGQA 146 (272)
T ss_pred CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C---EEEEeCchhhcC
Confidence 8999999999864 35677788999999999999999999999999998653 3 999999987654
No 32
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.93 E-value=2e-24 Score=163.81 Aligned_cols=138 Identities=15% Similarity=0.238 Sum_probs=112.9
Q ss_pred cCcCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecChh---HHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHH
Q 030328 33 IPIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGE---KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD 107 (179)
Q Consensus 33 ~~~~~k~vlItGa~--~~iG~~la~~l~~~g~~v~~~~r~~~---~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~ 107 (179)
+++++|+++||||+ +|||+++|++|+++|++|++++|+.+ .+++..+++ .+.++..+.+|++|+++++++++
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~ 79 (257)
T PRK08594 3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTL---EGQESLLLPCDVTSDEEITACFE 79 (257)
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHc---CCCceEEEecCCCCHHHHHHHHH
Confidence 45689999999997 89999999999999999999987643 333333322 24567889999999999888765
Q ss_pred h----hCCCcEEEecCCCCC----CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 108 E----AGPVDVLVVNQGVFV----PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 108 ~----~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+ ++++|++|||||... ..++.+.+.++|+..+++|+.+++.+++.++|.|.+ + ++||++||.++..
T Consensus 80 ~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~---g~Iv~isS~~~~~ 153 (257)
T PRK08594 80 TIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--G---GSIVTLTYLGGER 153 (257)
T ss_pred HHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--C---ceEEEEcccCCcc
Confidence 4 589999999999754 245677899999999999999999999999999954 2 3999999998764
No 33
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.93 E-value=2.9e-24 Score=164.13 Aligned_cols=137 Identities=16% Similarity=0.220 Sum_probs=111.5
Q ss_pred cCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 35 IKDRHVFITGGSS--GIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 35 ~~~k~vlItGa~~--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
+++|++|||||++ |||+++|++|+++|++|++++|+++..++ .+++....+. ...+++|++|.+++++++++
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~~ 82 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESLGS-DFVLPCDVEDIASVDAVFEALEKK 82 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHHH
Confidence 6789999999996 99999999999999999999988644333 2333222232 34689999999999887765
Q ss_pred hCCCcEEEecCCCCCC----CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 ~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||.... .++.+.+.++|++.+++|+.+++.++|.++|.|++ + ++||++||.++..
T Consensus 83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~---G~Iv~isS~~~~~ 151 (271)
T PRK06505 83 WGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--G---GSMLTLTYGGSTR 151 (271)
T ss_pred hCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--C---ceEEEEcCCCccc
Confidence 5899999999997653 45678899999999999999999999999999963 2 3899999987753
No 34
>PRK06194 hypothetical protein; Provisional
Probab=99.93 E-value=4.7e-24 Score=163.83 Aligned_cols=143 Identities=29% Similarity=0.373 Sum_probs=122.5
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
+++|++|||||+||||+++|++|+++|++|++++|+.+..++..+++... +.++..+.+|++|.++++++++. ++
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ-GAEVLGVRTDVSDAAQVEALADAALERFG 82 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 56899999999999999999999999999999999988777766665432 55788899999999999887664 47
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCC---CCcEEEEecccCccc
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNG---GPASIALMSSQAGQV 178 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~~~iv~iss~~g~~ 178 (179)
++|++|||||.....++.+.+.++|+..+++|+.|++.+++.++|.|.++... ..++||++||.++..
T Consensus 83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 153 (287)
T PRK06194 83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL 153 (287)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc
Confidence 89999999999887777788999999999999999999999999999876531 124899999987754
No 35
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.93 E-value=5.5e-24 Score=160.79 Aligned_cols=141 Identities=27% Similarity=0.376 Sum_probs=121.9
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
.+++|++|||||+++||++++++|+++|++|++++|++++.++..+++... +.++..+.+|++++++++++++. +
T Consensus 6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE-GIKAHAAPFNVTHKQEVEAAIEHIEKDI 84 (254)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 468999999999999999999999999999999999988877776666432 45677889999999998887654 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.+.+.|.+++. ++|+++||..+..
T Consensus 85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~~iv~isS~~~~~ 150 (254)
T PRK08085 85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQA---GKIINICSMQSEL 150 (254)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC---cEEEEEccchhcc
Confidence 78999999999877677888899999999999999999999999999976644 3899999987643
No 36
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.92 E-value=8.9e-24 Score=164.01 Aligned_cols=150 Identities=21% Similarity=0.267 Sum_probs=124.4
Q ss_pred CCCCCcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-hHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHH
Q 030328 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG-EKLEEAKQSIQLATGIEVATYSADVRDFDAVKTAL 106 (179)
Q Consensus 28 ~~~~~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~ 106 (179)
+.++...+++|+++||||++|||+++|++|+++|++|++++++. +..++..+++.. .+.++..+.+|+++.+++++++
T Consensus 3 ~~~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~-~g~~~~~~~~Dv~d~~~~~~~~ 81 (306)
T PRK07792 3 RTTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRA-AGAKAVAVAGDISQRATADELV 81 (306)
T ss_pred cccCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHh-cCCeEEEEeCCCCCHHHHHHHH
Confidence 34566778999999999999999999999999999999998754 445555555543 3667888999999999988876
Q ss_pred Hh---hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCC----CCcEEEEecccCccc
Q 030328 107 DE---AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNG----GPASIALMSSQAGQV 178 (179)
Q Consensus 107 ~~---~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~----~~~~iv~iss~~g~~ 178 (179)
++ ++++|++|||||......+.+.+.++|+..+++|+.+++++++++.|+|+++.+. ..++||++||.++..
T Consensus 82 ~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 160 (306)
T PRK07792 82 ATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV 160 (306)
T ss_pred HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc
Confidence 54 5799999999998877777888999999999999999999999999999764211 125899999987754
No 37
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.92 E-value=6.2e-24 Score=161.13 Aligned_cols=139 Identities=17% Similarity=0.210 Sum_probs=111.1
Q ss_pred cCcCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh--
Q 030328 33 IPIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (179)
Q Consensus 33 ~~~~~k~vlItGa~--~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~-- 108 (179)
.++++|+++||||+ +|||+++|++|+++|++|++++|+++..+ ..+++....+ .+..+.+|++|.+++++++++
T Consensus 6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~ 83 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEELD-APIFLPLDVREPGQLEAVFARIA 83 (258)
T ss_pred cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhc-cceEEecCcCCHHHHHHHHHHHH
Confidence 34689999999998 59999999999999999999999865322 2222322212 245688999999999887755
Q ss_pred --hCCCcEEEecCCCCCC----CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 --AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 --~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||.... .++.+.+.++|++++++|+.+++++++.++|.|++ + ++|+++||.++..
T Consensus 84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~---g~Ii~iss~~~~~ 154 (258)
T PRK07533 84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--G---GSLLTMSYYGAEK 154 (258)
T ss_pred HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--C---CEEEEEecccccc
Confidence 4899999999997643 45677899999999999999999999999999953 2 3899999987643
No 38
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.92 E-value=4.2e-24 Score=151.66 Aligned_cols=134 Identities=38% Similarity=0.599 Sum_probs=116.8
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecC--hhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGA-RVSILARS--GEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
|+++||||++|||++++++|+++|+ +|++++|+ .+..++..+++. ..+.++.++.+|++++++++++++. .+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELK-APGAKITFIECDLSDPESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHH-HTTSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccc-ccccccccccccccccccccccccccccccc
Confidence 7899999999999999999999965 57888888 566777766666 3468899999999999999887765 47
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcccC
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQVG 179 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~g 179 (179)
++|++|||+|....+++.+.+.++|++++++|+.+++.+.+.+.| ++ .+.||++||.+|..|
T Consensus 80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~---~g~iv~~sS~~~~~~ 141 (167)
T PF00106_consen 80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QG---GGKIVNISSIAGVRG 141 (167)
T ss_dssp SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HT---TEEEEEEEEGGGTSS
T ss_pred cccccccccccccccccccccchhhhhccccccceeeeeeehhee----cc---ccceEEecchhhccC
Confidence 999999999999888899999999999999999999999999999 22 349999999998764
No 39
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.92 E-value=5.6e-24 Score=161.59 Aligned_cols=138 Identities=20% Similarity=0.261 Sum_probs=111.4
Q ss_pred CcCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh---
Q 030328 34 PIKDRHVFITGGSS--GIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (179)
Q Consensus 34 ~~~~k~vlItGa~~--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~--- 108 (179)
.+++|+++||||++ |||+++|++|+++|++|++++|++ ..++..+++....+.. ..+.+|++|++++++++++
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~-~~~~~Dv~~~~~v~~~~~~~~~ 82 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCN-FVSELDVTNPKSISNLFDDIKE 82 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCc-eEEEccCCCHHHHHHHHHHHHH
Confidence 36789999999997 999999999999999999998874 3333444443332332 4578999999999887754
Q ss_pred -hCCCcEEEecCCCCCC----CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 -AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 -~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||.... .++.+.+.++|++.+++|+.+++.+++.+.|.|++ + ++||++||.++..
T Consensus 83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~---G~Iv~isS~~~~~ 152 (260)
T PRK06603 83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--G---GSIVTLTYYGAEK 152 (260)
T ss_pred HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--C---ceEEEEecCcccc
Confidence 5899999999997542 45678899999999999999999999999999953 2 3899999987653
No 40
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.92 E-value=8.3e-24 Score=159.91 Aligned_cols=140 Identities=33% Similarity=0.461 Sum_probs=122.3
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
++++|+++||||+++||++++++|+++|++|++++|++++.++..+++.. .+.++..+.+|+++.+++++++++ +
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKG-QGLSAHALAFDVTDHDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-cCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 46899999999999999999999999999999999998877766666643 256788899999999999887765 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
+++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.+.+.|.+++.+ +||++||..+.
T Consensus 86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g---~iv~iss~~~~ 150 (255)
T PRK07523 86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAG---KIINIASVQSA 150 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCe---EEEEEccchhc
Confidence 789999999998877788888999999999999999999999999999876544 99999998654
No 41
>PLN02253 xanthoxin dehydrogenase
Probab=99.92 E-value=9.7e-24 Score=161.62 Aligned_cols=140 Identities=28% Similarity=0.404 Sum_probs=118.4
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
.+++|+++||||+++||++++++|+++|++|++++|+++..++..+++. .+.++..+.+|++|.++++++++. +
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 92 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG--GEPNVCFFHCDVTVEDDVSRAVDFTVDKF 92 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc--CCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence 4679999999999999999999999999999999998877666555542 235688899999999998877654 5
Q ss_pred CCCcEEEecCCCCCC--CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVP--GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||||.... .++.+.+.++|+.++++|+.+++.+++++.|.|.+++.+ +|+++||.++..
T Consensus 93 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g---~ii~isS~~~~~ 160 (280)
T PLN02253 93 GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKG---SIVSLCSVASAI 160 (280)
T ss_pred CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCc---eEEEecChhhcc
Confidence 789999999997643 356778999999999999999999999999999876544 899999987754
No 42
>PRK06398 aldose dehydrogenase; Validated
Probab=99.92 E-value=3.7e-24 Score=162.35 Aligned_cols=130 Identities=30% Similarity=0.447 Sum_probs=113.7
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
++++|+++||||++|||+++|++|+++|++|++++|+++.. ..+..+.+|+++++++++++++ +
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------------~~~~~~~~D~~~~~~i~~~~~~~~~~~ 70 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------------NDVDYFKVDVSNKEQVIKGIDYVISKY 70 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc------------CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46799999999999999999999999999999999986431 2467889999999998887765 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++.+ +||++||.++..
T Consensus 71 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g---~iv~isS~~~~~ 136 (258)
T PRK06398 71 GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKG---VIINIASVQSFA 136 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe---EEEEeCcchhcc
Confidence 789999999998777788889999999999999999999999999999876543 999999987653
No 43
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.92 E-value=1.1e-23 Score=160.04 Aligned_cols=135 Identities=25% Similarity=0.369 Sum_probs=114.7
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
+++|+++||||++|||++++++|+++|++|++++|++++.++..+++ +.++..+.+|+++.+++++++++ ++
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 79 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL----GERARFIATDITDDAAIERAVATVVARFG 79 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCeeEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 57899999999999999999999999999999999987766655443 45678899999999998877655 57
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|++|||||....... +.+.++|++.+++|+.+++.+++.+.|.|+ ++. ++||++||.++..
T Consensus 80 ~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~---g~ii~isS~~~~~ 142 (261)
T PRK08265 80 RVDILVNLACTYLDDGL-ASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGG---GAIVNFTSISAKF 142 (261)
T ss_pred CCCEEEECCCCCCCCcC-cCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCC---cEEEEECchhhcc
Confidence 89999999997654433 568899999999999999999999999997 333 3999999987754
No 44
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.92 E-value=1.5e-23 Score=159.41 Aligned_cols=142 Identities=30% Similarity=0.462 Sum_probs=123.7
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
+++.+|+++|||++++||++++++|+++|++|++++|++++.++..+++.. .+.++..+++|+++.+++++++++
T Consensus 6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (265)
T PRK07097 6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRE-LGIEAHGYVCDVTDEDGVQAMVSQIEKE 84 (265)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 456899999999999999999999999999999999998887776666543 355788899999999999887765
Q ss_pred hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
.+++|++|||||.....++.+.+++++++++++|+.+++.+++.++|.|++++.+ +|+++||..+..
T Consensus 85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g---~iv~isS~~~~~ 151 (265)
T PRK07097 85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHG---KIINICSMMSEL 151 (265)
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCc---EEEEEcCccccC
Confidence 4789999999998877788888999999999999999999999999999876543 999999987654
No 45
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.92 E-value=1.6e-23 Score=161.68 Aligned_cols=142 Identities=27% Similarity=0.414 Sum_probs=119.8
Q ss_pred CCcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh--
Q 030328 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (179)
Q Consensus 31 ~~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~-- 108 (179)
....+.+|+++||||+||||+++|++|+++|++|++++|+++..++..+++.. .+.++..+.+|++|.++++++++.
T Consensus 34 ~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~ 112 (293)
T PRK05866 34 QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITR-AGGDAMAVPCDLSDLDAVDALVADVE 112 (293)
T ss_pred CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 34456789999999999999999999999999999999999888777766643 255678899999999999888764
Q ss_pred --hCCCcEEEecCCCCCCCCcccC--CHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 109 --AGPVDVLVVNQGVFVPGELEVQ--SLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 109 --~~~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
++++|++|||||.....++.+. +.++++..+++|+.|++.++++++|.|++++.+ +||++||.++
T Consensus 113 ~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g---~iv~isS~~~ 181 (293)
T PRK05866 113 KRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDG---HIINVATWGV 181 (293)
T ss_pred HHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc---EEEEECChhh
Confidence 5789999999998776655442 467889999999999999999999999876544 9999999654
No 46
>PRK09242 tropinone reductase; Provisional
Probab=99.92 E-value=1.7e-23 Score=158.38 Aligned_cols=142 Identities=30% Similarity=0.396 Sum_probs=123.0
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhh-cCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLA-TGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
.+++|+++||||+++||++++++|+++|++|++++|+.+..++..+++... .+.++..+.+|+++++++++++++
T Consensus 6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (257)
T PRK09242 6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH 85 (257)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999999988877776666543 256788899999999998777654
Q ss_pred hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++||++|.....+..+.+.+++++.+++|+.+++.+++++.|.|++++.+ +|+++||.++..
T Consensus 86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~ii~~sS~~~~~ 152 (257)
T PRK09242 86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASS---AIVNIGSVSGLT 152 (257)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc---eEEEECccccCC
Confidence 5789999999998766677788999999999999999999999999999876543 899999987754
No 47
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.92 E-value=5.8e-24 Score=161.34 Aligned_cols=139 Identities=20% Similarity=0.285 Sum_probs=112.4
Q ss_pred CcCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecChh--HHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh-
Q 030328 34 PIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGE--KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (179)
Q Consensus 34 ~~~~k~vlItGa~--~~iG~~la~~l~~~g~~v~~~~r~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~- 108 (179)
.+++|+++||||+ +|||+++|++|+++|++|++++++.+ +.++..+++... +..+..+.+|++|++++++++++
T Consensus 3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~ 81 (258)
T PRK07370 3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP-LNPSLFLPCDVQDDAQIEETFETI 81 (258)
T ss_pred ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc-cCcceEeecCcCCHHHHHHHHHHH
Confidence 3679999999986 89999999999999999998876543 233344444332 23466789999999999887755
Q ss_pred ---hCCCcEEEecCCCCCC----CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 ---AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 ---~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||.... .++.+.+.++|++++++|+.+++.+++.++|.|++. + +|+++||..+..
T Consensus 82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~--g---~Iv~isS~~~~~ 153 (258)
T PRK07370 82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG--G---SIVTLTYLGGVR 153 (258)
T ss_pred HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC--C---eEEEEecccccc
Confidence 4799999999997642 567788999999999999999999999999999642 3 899999987753
No 48
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.92 E-value=4.1e-24 Score=165.15 Aligned_cols=140 Identities=19% Similarity=0.236 Sum_probs=110.9
Q ss_pred cCcCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhh--------c-Cc---eEEEEEeeC--
Q 030328 33 IPIKDRHVFITGG--SSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLA--------T-GI---EVATYSADV-- 96 (179)
Q Consensus 33 ~~~~~k~vlItGa--~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--------~-~~---~v~~~~~D~-- 96 (179)
++++||++||||| ++|||+++|+.|++.|++|++ +|+.+++++...++... . +. ....+.+|+
T Consensus 5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T PLN02730 5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF 83 (303)
T ss_pred cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence 4579999999999 899999999999999999998 77777777666555321 1 11 145678888
Q ss_pred CC------------------HHHHHHHHH----hhCCCcEEEecCCCCC--CCCcccCCHHHHHHHHHhhhhHHHHHHHH
Q 030328 97 RD------------------FDAVKTALD----EAGPVDVLVVNQGVFV--PGELEVQSLDEVRLMIDVNIIGSFHMIKA 152 (179)
Q Consensus 97 ~~------------------~~~v~~~~~----~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 152 (179)
++ +++++++++ +++++|+||||||... ..++.+.+.++|++++++|+.+++.++|.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~ 163 (303)
T PLN02730 84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH 163 (303)
T ss_pred CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 32 336666554 3689999999997543 36788899999999999999999999999
Q ss_pred HcHHHHhccCCCCcEEEEecccCccc
Q 030328 153 ALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 153 ~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|.|+++ | +||++||.++..
T Consensus 164 ~~p~m~~~--G---~II~isS~a~~~ 184 (303)
T PLN02730 164 FGPIMNPG--G---ASISLTYIASER 184 (303)
T ss_pred HHHHHhcC--C---EEEEEechhhcC
Confidence 99999653 3 999999987754
No 49
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.92 E-value=1.5e-23 Score=158.28 Aligned_cols=139 Identities=32% Similarity=0.360 Sum_probs=118.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCCC
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~i 112 (179)
+|+++||||++|||++++++|+++|++|++++|+.++.++..+++... +.++..+.+|+++++++++++++ ++++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF-PGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 589999999999999999999999999999999988777766665432 45688899999999999887765 4789
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
|++|||+|.....++.+.+.++|++++++|+.+++.++++++|.|.++.. .++|+++||..+..
T Consensus 80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~g~ii~isS~~~~~ 143 (252)
T PRK07677 80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGI--KGNIINMVATYAWD 143 (252)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC--CEEEEEEcChhhcc
Confidence 99999999765567778899999999999999999999999999876432 24899999987753
No 50
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.92 E-value=1.1e-23 Score=159.47 Aligned_cols=138 Identities=34% Similarity=0.503 Sum_probs=115.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCCC
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~i 112 (179)
+|+++||||++|||++++++|+++|++|++++|+.+..++..+++... + ++..+.+|+++++++++++++ .+++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA-A-RVSVYAADVRDADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC-C-eeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 578999999999999999999999999999999988777665555321 2 788899999999999877654 4789
Q ss_pred cEEEecCCCCCCCCcc-cCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcccC
Q 030328 113 DVLVVNQGVFVPGELE-VQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQVG 179 (179)
Q Consensus 113 d~li~~ag~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~g 179 (179)
|++|||+|........ +.+.++++.++++|+.|++.+++.++|.|++++.+ +||++||.++..|
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~---~iv~isS~~~~~~ 144 (257)
T PRK07024 80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRG---TLVGIASVAGVRG 144 (257)
T ss_pred CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCC---EEEEEechhhcCC
Confidence 9999999976544333 36889999999999999999999999999876544 9999999887643
No 51
>PRK05599 hypothetical protein; Provisional
Probab=99.92 E-value=1.1e-23 Score=158.77 Aligned_cols=139 Identities=22% Similarity=0.294 Sum_probs=116.9
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCCCc
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVD 113 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~id 113 (179)
|+++||||++|||+++|++|+ +|++|++++|+++++++..+++....+..+..+.+|++|++++++++++ ++++|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999999 5999999999999888888777654333577889999999999887655 47899
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcccC
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQVG 179 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~g 179 (179)
++|||||.....+..+.+.+.+.+.+++|+.+++.+++.+.|.|.+++. .++||++||.+|..+
T Consensus 80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~--~g~Iv~isS~~~~~~ 143 (246)
T PRK05599 80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTA--PAAIVAFSSIAGWRA 143 (246)
T ss_pred EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC--CCEEEEEeccccccC
Confidence 9999999876655666777888899999999999999999999976532 239999999988653
No 52
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.92 E-value=2.5e-23 Score=157.32 Aligned_cols=143 Identities=26% Similarity=0.414 Sum_probs=124.1
Q ss_pred CcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh---
Q 030328 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (179)
Q Consensus 32 ~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~--- 108 (179)
+..+++|+++||||+++||++++++|+++|++|++++|+++..++..+++.. .+.++..+.+|+++++++.+++++
T Consensus 6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (256)
T PRK06124 6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRA-AGGAAEALAFDIADEEAVAAAFARIDA 84 (256)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 3447899999999999999999999999999999999998877777666643 355688899999999998877764
Q ss_pred -hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 -~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||+|.....++.+.+.++|++.+++|+.+++.+.+.++|.|.+.+.+ ++|++||..+..
T Consensus 85 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---~iv~~ss~~~~~ 152 (256)
T PRK06124 85 EHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYG---RIIAITSIAGQV 152 (256)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc---EEEEEeechhcc
Confidence 4789999999998777778888999999999999999999999999999776544 899999987654
No 53
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.92 E-value=1.7e-23 Score=158.58 Aligned_cols=141 Identities=23% Similarity=0.387 Sum_probs=119.5
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
..+++|+++||||+++||++++++|+++|++|++++|+ ++.++..+.+.. .+.++..+.+|+++.+++++++++
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 88 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEK-EGRKVTFVQVDLTKPESAEKVVKEALEE 88 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 34789999999999999999999999999999999998 444555444432 345688899999999998887764
Q ss_pred hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||+|.....++.+.+.++|++.+++|+.+++.++++++|.|++++.+ +|+++||..+..
T Consensus 89 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g---~iv~isS~~~~~ 155 (258)
T PRK06935 89 FGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSG---KIINIASMLSFQ 155 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCe---EEEEECCHHhcc
Confidence 4789999999998777777788899999999999999999999999999876544 899999987653
No 54
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.92 E-value=6.8e-24 Score=150.90 Aligned_cols=138 Identities=31% Similarity=0.420 Sum_probs=116.8
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHH----hh
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD----EA 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~----~~ 109 (179)
+..|-++||||+++|||+++|++|.+.|-+|+++.|+++++++..++. .......||+.|.++.+++++ .+
T Consensus 2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~-----p~~~t~v~Dv~d~~~~~~lvewLkk~~ 76 (245)
T COG3967 2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN-----PEIHTEVCDVADRDSRRELVEWLKKEY 76 (245)
T ss_pred cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC-----cchheeeecccchhhHHHHHHHHHhhC
Confidence 467889999999999999999999999999999999999988877754 345667899999988776654 46
Q ss_pred CCCcEEEecCCCCCCCCcc--cCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcccC
Q 030328 110 GPVDVLVVNQGVFVPGELE--VQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQVG 179 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~g 179 (179)
..++++|||||...+-.+. +...++.+..+++|+.+|+++++.++|++.+++.. .||++||-.++.|
T Consensus 77 P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a---~IInVSSGLafvP 145 (245)
T COG3967 77 PNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEA---TIINVSSGLAFVP 145 (245)
T ss_pred CchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCc---eEEEeccccccCc
Confidence 7899999999998765543 34556678899999999999999999999988765 9999999877654
No 55
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.92 E-value=1.6e-23 Score=159.23 Aligned_cols=138 Identities=19% Similarity=0.276 Sum_probs=109.9
Q ss_pred cCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 35 IKDRHVFITGG--SSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 35 ~~~k~vlItGa--~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
+++|+++|||| ++|||+++|++|+++|++|++++|+++ .++..+++....+ ....+++|++|++++++++++
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK-LEERVRKMAAELD-SELVFRCDVASDDEINQVFADLGKH 81 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH-HHHHHHHHHhccC-CceEEECCCCCHHHHHHHHHHHHHH
Confidence 67999999996 679999999999999999999887643 3333444433223 245689999999999887654
Q ss_pred hCCCcEEEecCCCCCCC----C-cccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 AGPVDVLVVNQGVFVPG----E-LEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 ~~~id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||..... + +++.+.++|+..+++|+.+++++++.+.|.|++++ ++|+++||.++..
T Consensus 82 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~----g~Iv~iss~~~~~ 152 (261)
T PRK08690 82 WDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRN----SAIVALSYLGAVR 152 (261)
T ss_pred hCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcC----cEEEEEccccccc
Confidence 58999999999986532 2 35678899999999999999999999999986542 3899999987753
No 56
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.92 E-value=1.3e-23 Score=160.96 Aligned_cols=133 Identities=26% Similarity=0.400 Sum_probs=115.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh-----C
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-----G 110 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~-----~ 110 (179)
.+|+++||||+||||++++++|+++|++|++++|+++..++..+ ..+..+.+|++|.+++++++++. +
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~-------~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g 75 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA-------EGLEAFQLDYAEPESIAALVAQVLELSGG 75 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------CCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999999876654322 13567899999999988877653 6
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|++|||||....+++.+.+.++++.++++|+.|++.+++.++|.|.+.+.+ +||++||.+|..
T Consensus 76 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g---~iv~isS~~~~~ 140 (277)
T PRK05993 76 RLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQG---RIVQCSSILGLV 140 (277)
T ss_pred CccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCC---EEEEECChhhcC
Confidence 89999999998888888889999999999999999999999999999876544 899999988754
No 57
>PRK05717 oxidoreductase; Validated
Probab=99.92 E-value=2.7e-23 Score=157.13 Aligned_cols=139 Identities=25% Similarity=0.353 Sum_probs=115.8
Q ss_pred CcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh---
Q 030328 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (179)
Q Consensus 32 ~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~--- 108 (179)
+..+++|+++||||+|+||+++|++|+++|++|++++|++++.++..+++ +.++.++.+|+++.+++++++++
T Consensus 5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (255)
T PRK05717 5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL----GENAWFIAMDVADEAQVAAGVAEVLG 80 (255)
T ss_pred CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 34568999999999999999999999999999999999877655543332 44677899999999998766544
Q ss_pred -hCCCcEEEecCCCCCC--CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 -AGPVDVLVVNQGVFVP--GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 -~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||...+ .++.+.+.++|+..+++|+.+++.+++++.|.|.+.. ++|+++||.++..
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----g~ii~~sS~~~~~ 149 (255)
T PRK05717 81 QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHN----GAIVNLASTRARQ 149 (255)
T ss_pred HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC----cEEEEEcchhhcC
Confidence 5789999999997643 4667789999999999999999999999999997643 3899999987754
No 58
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.92 E-value=3.6e-23 Score=156.21 Aligned_cols=142 Identities=30% Similarity=0.402 Sum_probs=121.1
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
+.+++|+++||||+|+||.+++++|+++|++|++++|++++.++..+++.. .+.++..+.+|+++.+++++++++
T Consensus 3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 81 (253)
T PRK06172 3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIRE-AGGEALFVACDVTRDAEVKALVEQTIAA 81 (253)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 346799999999999999999999999999999999998887777666643 356788899999999998887654
Q ss_pred hCCCcEEEecCCCCCC-CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 AGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||+|.... .++.+.+.+++++.+++|+.+++.++++++|.|.+++.+ +++++||..+..
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---~ii~~sS~~~~~ 149 (253)
T PRK06172 82 YGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGG---AIVNTASVAGLG 149 (253)
T ss_pred hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc---EEEEECchhhcc
Confidence 4789999999997654 346778999999999999999999999999999876544 899999987654
No 59
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.92 E-value=3.5e-23 Score=156.77 Aligned_cols=140 Identities=25% Similarity=0.339 Sum_probs=120.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcC-ceEEEEEeeCCCHHHHHHHHHh----hCC
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATG-IEVATYSADVRDFDAVKTALDE----AGP 111 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~v~~~~~~----~~~ 111 (179)
+|+++||||+++||++++++|+++|++|++++|+.+..++..+++....+ .++..+.+|+++.+++.+++++ +++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999999998877766666544333 4688899999999998877655 478
Q ss_pred CcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 112 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+|++|||||.....++.+.+.++|+..+++|+.+++.++|.+.|.|++++. .++|+++||.++..
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~~~iv~~ss~~~~~ 146 (259)
T PRK12384 82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGI--QGRIIQINSKSGKV 146 (259)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC--CcEEEEecCccccc
Confidence 999999999888778888999999999999999999999999999987641 23999999977654
No 60
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.92 E-value=2.6e-23 Score=157.61 Aligned_cols=135 Identities=32% Similarity=0.386 Sum_probs=118.4
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh-----hCCC
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-----AGPV 112 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~-----~~~i 112 (179)
|+++||||+|+||++++++|+++|++|++++|+.+..++..+++. +.++.++.+|+++.++++++++. .+++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG---AGNAWTGALDVTDRAAWDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 789999999999999999999999999999999887776655443 45788899999999999887664 4689
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
|++|||||.....++.+.+.++++.++++|+.+++.+++++.+.|++++.+ +|+++||..+..
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~iv~isS~~~~~ 141 (260)
T PRK08267 79 DVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGA---RVINTSSASAIY 141 (260)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC---EEEEeCchhhCc
Confidence 999999998887788888999999999999999999999999999876554 999999987654
No 61
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.92 E-value=3.3e-23 Score=156.06 Aligned_cols=140 Identities=31% Similarity=0.403 Sum_probs=121.3
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
++++|+++||||+|+||.+++++|+++|++|++++|+.+..++..+++. .+.++..+.+|++|++++++++++ .
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA--AGGRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh--cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999999887766665554 356688899999999999887765 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||+|.....++.+.+.++++..+++|+.+++.+++.++|.|++.+. ++|+++||..+..
T Consensus 80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~~ii~~sS~~~~~ 145 (252)
T PRK06138 80 GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGG---GSIVNTASQLALA 145 (252)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC---eEEEEECChhhcc
Confidence 78999999999877777778899999999999999999999999999987654 3999999986643
No 62
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.92 E-value=3.6e-23 Score=157.17 Aligned_cols=141 Identities=29% Similarity=0.441 Sum_probs=121.9
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh---hC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---AG 110 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---~~ 110 (179)
.+++++++||||+|+||.+++++|+++|++|++++|+++..++...++ ..+.++.++.+|++|.++++++++. .+
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL--PYPGRHRWVVADLTSEAGREAVLARAREMG 79 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--hcCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence 357899999999999999999999999999999999988777766665 2355788899999999998887665 47
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcccC
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQVG 179 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~g 179 (179)
++|++|||||.....++.+.+.+++++++++|+.|++.+++.+.|.|.+++.+ .++++||..+..|
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~---~iv~isS~~~~~~ 145 (263)
T PRK09072 80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSA---MVVNVGSTFGSIG 145 (263)
T ss_pred CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC---EEEEecChhhCcC
Confidence 89999999998777778888999999999999999999999999999876544 8999999876543
No 63
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=99.92 E-value=2.3e-23 Score=157.17 Aligned_cols=141 Identities=30% Similarity=0.376 Sum_probs=119.9
Q ss_pred CCcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh--
Q 030328 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (179)
Q Consensus 31 ~~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~-- 108 (179)
...+..+|.|+|||+.+|.|+.+|++|.++|++|+...-+++..+....+.. ..+......|++++++++++.+.
T Consensus 23 ~~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~---s~rl~t~~LDVT~~esi~~a~~~V~ 99 (322)
T KOG1610|consen 23 VLDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK---SPRLRTLQLDVTKPESVKEAAQWVK 99 (322)
T ss_pred cccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc---CCcceeEeeccCCHHHHHHHHHHHH
Confidence 3445789999999999999999999999999999998887777666555542 56677789999999999876543
Q ss_pred -h---CCCcEEEecCCCCC-CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 -A---GPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 -~---~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
. .++..||||||+.. .++.+..+.+++.+++++|..|++.++++++|.+++.++ |||++||.+|..
T Consensus 100 ~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arG----RvVnvsS~~GR~ 170 (322)
T KOG1610|consen 100 KHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARG----RVVNVSSVLGRV 170 (322)
T ss_pred HhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccC----eEEEecccccCc
Confidence 1 35899999999664 578888999999999999999999999999999987654 999999999864
No 64
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.92 E-value=3e-23 Score=156.86 Aligned_cols=140 Identities=21% Similarity=0.300 Sum_probs=116.7
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
++++|+++|||+++|||+++|++|+++|++|++++++.. ++..+++.. .+.++..+.+|++|.+++++++++ .
T Consensus 7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (253)
T PRK08993 7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTA-LGRRFLSLTADLRKIDGIPALLERAVAEF 83 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 478999999999999999999999999999998887543 233334432 255678899999999999887765 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||||.....++.+.++++|++.+++|+.+++.+++.+.|.|.+++. .++|+++||.++..
T Consensus 84 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--~g~iv~isS~~~~~ 150 (253)
T PRK08993 84 GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGN--GGKIINIASMLSFQ 150 (253)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC--CeEEEEECchhhcc
Confidence 78999999999877777788899999999999999999999999999977532 24899999987654
No 65
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.92 E-value=2.7e-23 Score=156.88 Aligned_cols=138 Identities=28% Similarity=0.396 Sum_probs=114.4
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh-----
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILA-RSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----- 108 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----- 108 (179)
+++|+++||||++|||+++|++|+++|++|++++ ++++..++...++.. .+.++..+.+|+++.+++++++++
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQS-NGGSAFSIGANLESLHGVEALYSSLDNEL 80 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHh-cCCceEEEecccCCHHHHHHHHHHHHHHh
Confidence 3689999999999999999999999999998875 566666666555543 355677889999999888766543
Q ss_pred ---hC--CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 ---AG--PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 ---~~--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
.+ ++|++|||||.....++.+.++++|++++++|+.+++.+++.++|.|++. ++||++||.++..
T Consensus 81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-----g~iv~isS~~~~~ 150 (252)
T PRK12747 81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-----SRIINISSAATRI 150 (252)
T ss_pred hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-----CeEEEECCccccc
Confidence 13 79999999998766677888999999999999999999999999999653 3999999998754
No 66
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.92 E-value=3.4e-23 Score=161.30 Aligned_cols=140 Identities=27% Similarity=0.391 Sum_probs=116.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
.+|+++||||++|||+++|++|+++| ++|++++|++++.++..+++.. .+..+..+.+|+++.+++++++++ .+
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 80 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM-PKDSYTIMHLDLGSLDSVRQFVQQFRESGR 80 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC-CCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 47899999999999999999999999 9999999998877776666532 245677889999999999887765 47
Q ss_pred CCcEEEecCCCCCC-CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 111 PVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 111 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
++|++|||||...+ .+..+.++++|+.++++|+.+++.+++.++|.|++++. +.++||++||.++.
T Consensus 81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-~~g~IV~vsS~~~~ 147 (314)
T TIGR01289 81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPN-KDKRLIIVGSITGN 147 (314)
T ss_pred CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCC-CCCeEEEEecCccc
Confidence 89999999997543 23345688999999999999999999999999987532 13499999998764
No 67
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.92 E-value=4.7e-23 Score=155.84 Aligned_cols=138 Identities=28% Similarity=0.404 Sum_probs=118.5
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
+.+|+++||||+++||+++|++|+++|++|++++|++++.++..+++.. .+.++..+.+|+++.+++++++++ ++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDD-LGRRALAVPTDITDEDQCANLVALALERFG 81 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHH-hCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999999998877776666543 245678899999999998877654 47
Q ss_pred CCcEEEecCCCCCC-CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 111 PVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 111 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
++|++|||||...+ .++.+.+.+++++++++|+.+++.+++++.+.|.+.+ ++|+++||..+.
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~~ii~~sS~~~~ 145 (258)
T PRK07890 82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG----GSIVMINSMVLR 145 (258)
T ss_pred CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC----CEEEEEechhhc
Confidence 89999999997654 5677788999999999999999999999999987654 299999998764
No 68
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.91 E-value=4.6e-23 Score=157.74 Aligned_cols=142 Identities=28% Similarity=0.397 Sum_probs=120.3
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
..+++|+++||||+++||++++++|+++|++|++++|+.+..++..+++.. .+.++..+.+|+++++++++++++
T Consensus 6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (278)
T PRK08277 6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKA-AGGEALAVKADVLDKESLEQARQQILED 84 (278)
T ss_pred eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999998877777666643 355788899999999998877654
Q ss_pred hCCCcEEEecCCCCCC---------------CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecc
Q 030328 109 AGPVDVLVVNQGVFVP---------------GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (179)
Q Consensus 109 ~~~id~li~~ag~~~~---------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss 173 (179)
++++|++|||||...+ .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.+ +||++||
T Consensus 85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g---~ii~isS 161 (278)
T PRK08277 85 FGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGG---NIINISS 161 (278)
T ss_pred cCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc---EEEEEcc
Confidence 5789999999996543 245678899999999999999999999999999876544 9999999
Q ss_pred cCccc
Q 030328 174 QAGQV 178 (179)
Q Consensus 174 ~~g~~ 178 (179)
.++..
T Consensus 162 ~~~~~ 166 (278)
T PRK08277 162 MNAFT 166 (278)
T ss_pred chhcC
Confidence 87754
No 69
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.91 E-value=5.3e-23 Score=156.47 Aligned_cols=141 Identities=35% Similarity=0.575 Sum_probs=119.8
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
+.+++|+++||||+++||.+++++|+++|++|++++|+.++.++..+++... +.++.++.+|+++++++++++++
T Consensus 5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 83 (264)
T PRK07576 5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA-GPEGLGVSADVRDYAAVEAAFAQIADE 83 (264)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999988776665555432 44567889999999999887765
Q ss_pred hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|.|++++ + +|+++||.++..
T Consensus 84 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~-g---~iv~iss~~~~~ 149 (264)
T PRK07576 84 FGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPG-A---SIIQISAPQAFV 149 (264)
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-C---EEEEECChhhcc
Confidence 47899999999876666777889999999999999999999999999987543 3 899999987643
No 70
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.91 E-value=3e-23 Score=156.91 Aligned_cols=136 Identities=35% Similarity=0.474 Sum_probs=113.3
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
+.+++|+++||||++|||+++|++|+++|++|++++++.++.. +++.. ..+..+.+|++|++++++++++
T Consensus 3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~---~~l~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~ 76 (255)
T PRK06463 3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA---KELRE---KGVFTIKCDVGNRDQVKKSKEVVEKE 76 (255)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHh---CCCeEEEecCCCHHHHHHHHHHHHHH
Confidence 4568999999999999999999999999999998877654322 22221 1367789999999999887765
Q ss_pred hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 109 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
++++|++|||||.....++.+.++++|++.+++|+.+++.+++.++|.|++++.+ +||++||.++.
T Consensus 77 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g---~iv~isS~~~~ 142 (255)
T PRK06463 77 FGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNG---AIVNIASNAGI 142 (255)
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCc---EEEEEcCHHhC
Confidence 4789999999998776777888999999999999999999999999999865543 99999998764
No 71
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.91 E-value=5.8e-23 Score=155.94 Aligned_cols=143 Identities=29% Similarity=0.360 Sum_probs=121.9
Q ss_pred CcCCcEEEEEcCCC-chHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcC-ceEEEEEeeCCCHHHHHHHHHh---
Q 030328 34 PIKDRHVFITGGSS-GIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATG-IEVATYSADVRDFDAVKTALDE--- 108 (179)
Q Consensus 34 ~~~~k~vlItGa~~-~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~v~~~~~~--- 108 (179)
.+++|+++||||+| |||++++++|+++|++|++++|+.++.++..+++....+ .++..+.+|+++++++++++++
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 45789999999985 999999999999999999999998887777776654333 4678899999999999887765
Q ss_pred -hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 -~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||.....++.+.+.++|++.+++|+.+++.+++.+.|.|++... .++|+++||..+..
T Consensus 94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~g~iv~~ss~~~~~ 162 (262)
T PRK07831 94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGH--GGVIVNNASVLGWR 162 (262)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CcEEEEeCchhhcC
Confidence 478999999999877777888899999999999999999999999999987641 23899999987653
No 72
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.91 E-value=2.7e-23 Score=158.86 Aligned_cols=137 Identities=16% Similarity=0.238 Sum_probs=109.6
Q ss_pred CcCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh---
Q 030328 34 PIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (179)
Q Consensus 34 ~~~~k~vlItGa~--~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~--- 108 (179)
.+++|+++||||+ +|||+++|++|+++|++|++++|+++. ++..+++....+ ....+++|++|++++++++++
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~-~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~ 84 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDAL-KKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLEK 84 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH-HHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHHH
Confidence 3578999999997 899999999999999999999886432 222233322223 245689999999999887754
Q ss_pred -hCCCcEEEecCCCCCC----CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 109 -AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 109 -~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
++++|++|||||.... .++.+.+.++|++.+++|+.+++.+++.+.|.|.+ + ++|+++||.++.
T Consensus 85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~---g~Iv~iss~~~~ 153 (272)
T PRK08159 85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--G---GSILTLTYYGAE 153 (272)
T ss_pred hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--C---ceEEEEeccccc
Confidence 5789999999997642 46678899999999999999999999999999853 2 389999998764
No 73
>PRK08643 acetoin reductase; Validated
Probab=99.91 E-value=6.4e-23 Score=155.07 Aligned_cols=139 Identities=29% Similarity=0.392 Sum_probs=119.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCCC
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~i 112 (179)
+|+++||||+++||++++++|+++|++|++++|+.+..++..+++.. .+.++..+.+|+++++++++++++ ++++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 80 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSK-DGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL 80 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999999999998877777666643 245778899999999998887665 4789
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
|++|||||.....++.+.+.++++..+++|+.+++.+++.+.+.|++.+. .++|+++||..+..
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~ 144 (256)
T PRK08643 81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGH--GGKIINATSQAGVV 144 (256)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CCEEEEECcccccc
Confidence 99999999877777888899999999999999999999999999976532 24899999987654
No 74
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.91 E-value=4.9e-23 Score=157.41 Aligned_cols=140 Identities=33% Similarity=0.498 Sum_probs=117.5
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhH-------HHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHH
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEK-------LEEAKQSIQLATGIEVATYSADVRDFDAVKTAL 106 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~-------~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~ 106 (179)
++++|+++||||++|||+++|++|+++|++|++++|+.+. +++..+++.. .+.++..+.+|+++.+++++++
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~ 81 (273)
T PRK08278 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEA-AGGQALPLVGDVRDEDQVAAAV 81 (273)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHH
Confidence 3678999999999999999999999999999999997653 3333344432 3557888999999999988876
Q ss_pred Hh----hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 107 DE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 107 ~~----~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
++ ++++|++|||||.....++.+.+.++|++++++|+.+++.+++.+.|.|+++..+ +|+++||..+.
T Consensus 82 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g---~iv~iss~~~~ 153 (273)
T PRK08278 82 AKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENP---HILTLSPPLNL 153 (273)
T ss_pred HHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCC---EEEEECCchhc
Confidence 64 4789999999998777778888999999999999999999999999999876543 89999987653
No 75
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.91 E-value=5.6e-23 Score=155.71 Aligned_cols=138 Identities=28% Similarity=0.414 Sum_probs=115.2
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
++++|+++||||++|||++++++|+++|++|++++|++. .++..+++.. .+.++..+.+|+++.+++++++++ +
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRA-AGGEALALTADLETYAGAQAAMAAAVEAF 82 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHh-cCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 468999999999999999999999999999999999853 3344444432 355678899999999988777654 5
Q ss_pred CCCcEEEecCCCCC-CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 110 GPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 110 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
+++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++.+ +||++||.++
T Consensus 83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g---~iv~~sS~~~ 147 (260)
T PRK12823 83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGG---AIVNVSSIAT 147 (260)
T ss_pred CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC---eEEEEcCccc
Confidence 78999999998643 4577788999999999999999999999999999876544 8999999865
No 76
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.91 E-value=6.9e-23 Score=155.71 Aligned_cols=142 Identities=27% Similarity=0.390 Sum_probs=121.6
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
++++|+++||||+++||.+++++|+++|++|++++|++++.++..+++.. .+.++.++.+|+++++++++++++ +
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRA-AGRRAHVVAADLAHPEATAGLAGQAVEAF 85 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999999998877766666543 245688889999999998877654 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++||+||.....++.+.+.++++..+++|+.+++.+++.+.|.|.+... .++|+++||..+..
T Consensus 86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~g~iv~~sS~~~~~ 152 (263)
T PRK07814 86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG--GGSVINISSTMGRL 152 (263)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC--CeEEEEEccccccC
Confidence 78999999999876677778899999999999999999999999999987432 24899999988754
No 77
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.91 E-value=7.5e-23 Score=153.95 Aligned_cols=140 Identities=28% Similarity=0.443 Sum_probs=120.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhh-cCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLA-TGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
++|+++||||++|||++++++|+++|++|++++|++++.++..+++... .+.++.++.+|+++.+++++++++ .+
T Consensus 1 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK08251 1 TRQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG 80 (248)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999999999999998887776666543 256788899999999998887664 47
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|++|||||.....++.+.+.+.+++++++|+.+++.+++.+.|.|++.+.+ +||++||..+..
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---~iv~~sS~~~~~ 145 (248)
T PRK08251 81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSG---HLVLISSVSAVR 145 (248)
T ss_pred CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC---eEEEEecccccc
Confidence 89999999998877777777889999999999999999999999999876543 899999987654
No 78
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.91 E-value=2.8e-23 Score=157.94 Aligned_cols=137 Identities=15% Similarity=0.230 Sum_probs=109.1
Q ss_pred cCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 35 IKDRHVFITGGSS--GIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 35 ~~~k~vlItGa~~--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
+++|+++||||++ |||+++|++|+++|++|++++|+. +.++..+++.... .....+.+|++|++++++++++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~ 81 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQL-GSDIVLPCDVAEDASIDAMFAELGKV 81 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhcc-CCceEeecCCCCHHHHHHHHHHHHhh
Confidence 5789999999986 999999999999999999999873 3334444443322 2456788999999999887754
Q ss_pred hCCCcEEEecCCCCCCCC-----cccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 AGPVDVLVVNQGVFVPGE-----LEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 ~~~id~li~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||.....+ +.+.+.++|+..+++|+.+++.+++.+.|.|.+ + ++|+++||.++..
T Consensus 82 ~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~---g~Iv~iss~~~~~ 151 (262)
T PRK07984 82 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--G---SALLTLSYLGAER 151 (262)
T ss_pred cCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC--C---cEEEEEecCCCCC
Confidence 578999999999754322 556789999999999999999999999886632 2 3899999987653
No 79
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.91 E-value=7e-23 Score=155.12 Aligned_cols=141 Identities=22% Similarity=0.276 Sum_probs=116.3
Q ss_pred CcCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecC-----------hhHHHHHHHHHHhhcCceEEEEEeeCCCHH
Q 030328 34 PIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARS-----------GEKLEEAKQSIQLATGIEVATYSADVRDFD 100 (179)
Q Consensus 34 ~~~~k~vlItGa~--~~iG~~la~~l~~~g~~v~~~~r~-----------~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 100 (179)
.+++|+++||||+ +|||+++|++|+++|++|++++++ .++.++..+++. ..+.++..+.+|+++.+
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~D~~~~~ 81 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELL-KNGVKVSSMELDLTQND 81 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHH-hcCCeEEEEEcCCCCHH
Confidence 4789999999998 499999999999999999987542 122223333333 33667888999999999
Q ss_pred HHHHHHHh----hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 101 AVKTALDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 101 ~v~~~~~~----~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
+++++++. ++++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++.+ +||++||.++
T Consensus 82 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g---~iv~isS~~~ 158 (256)
T PRK12859 82 APKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGG---RIINMTSGQF 158 (256)
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCe---EEEEEccccc
Confidence 99887754 5789999999998777778889999999999999999999999999999876544 9999999887
Q ss_pred cc
Q 030328 177 QV 178 (179)
Q Consensus 177 ~~ 178 (179)
..
T Consensus 159 ~~ 160 (256)
T PRK12859 159 QG 160 (256)
T ss_pred CC
Confidence 54
No 80
>PRK05855 short chain dehydrogenase; Validated
Probab=99.91 E-value=4.7e-23 Score=171.74 Aligned_cols=143 Identities=27% Similarity=0.329 Sum_probs=125.2
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
....+++++||||+||||++++++|+++|++|++++|+.+..++..+++.. .+.++..+.+|++|++++++++++
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 389 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRA-AGAVAHAYRVDVSDADAMEAFAEWVRAE 389 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 346789999999999999999999999999999999999888877776643 355788899999999998887765
Q ss_pred hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
.+++|++|||||....+++.+.+.+++++++++|+.|++.+++.++|.|.+++. .++||++||.++..
T Consensus 390 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~ 457 (582)
T PRK05855 390 HGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGT--GGHIVNVASAAAYA 457 (582)
T ss_pred cCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CcEEEEECChhhcc
Confidence 478999999999988888888999999999999999999999999999987642 24999999998764
No 81
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.91 E-value=7.1e-23 Score=159.96 Aligned_cols=141 Identities=28% Similarity=0.390 Sum_probs=117.7
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
+..+|+++||||++|||.+++++|+++|++|++++|+.++.++..+++.. .+.++.++.+|+++.+++++++++ .
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGI-PPDSYTIIHIDLGDLDSVRRFVDDFRALG 81 (322)
T ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc-cCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 35789999999999999999999999999999999998887777666642 245678899999999999887765 3
Q ss_pred CCCcEEEecCCCCCCC-CcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 110 GPVDVLVVNQGVFVPG-ELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 110 ~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
+++|++|||||..... ...+.++++++..+++|+.|++.+++.++|.|++.+.+ .++||++||.+.
T Consensus 82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~~riV~vsS~~~ 148 (322)
T PRK07453 82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAP-DPRLVILGTVTA 148 (322)
T ss_pred CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCC-CceEEEEccccc
Confidence 5799999999976542 23456889999999999999999999999999876431 248999999754
No 82
>PRK06182 short chain dehydrogenase; Validated
Probab=99.91 E-value=4.6e-23 Score=157.39 Aligned_cols=133 Identities=35% Similarity=0.509 Sum_probs=114.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCC
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~ 111 (179)
++|+++||||+||||++++++|+++|++|++++|+++++++..+ ..+..+.+|++|.+++++++++ .++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~-------~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~ 74 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-------LGVHPLSLDVTDEASIKAAVDTIIAEEGR 74 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-------CCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 57899999999999999999999999999999999876554321 2367789999999998877664 478
Q ss_pred CcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 112 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+|++|||||....+++.+.+.++++..+++|+.+++.+++.++|.|++++.+ +||++||..+..
T Consensus 75 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g---~iv~isS~~~~~ 138 (273)
T PRK06182 75 IDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSG---RIINISSMGGKI 138 (273)
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCC---EEEEEcchhhcC
Confidence 9999999999877788888999999999999999999999999999876544 899999987643
No 83
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.91 E-value=1.1e-22 Score=153.44 Aligned_cols=141 Identities=26% Similarity=0.385 Sum_probs=119.8
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
++++|+++||||+++||++++++|+++|++|++++|+.++.++..+++.. .+.++..+.+|+++.+++++++++ +
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVA-AGGKAEALACHIGEMEQIDALFAHIRERH 83 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 57899999999999999999999999999999999998887777776643 245677889999999998877654 4
Q ss_pred CCCcEEEecCCCCC-CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||||... ..++.+.+.++++..+++|+.+++.++++++|+|++++.+ +|+++||..+..
T Consensus 84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~iv~~sS~~~~~ 150 (252)
T PRK07035 84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGG---SIVNVASVNGVS 150 (252)
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCc---EEEEECchhhcC
Confidence 78999999998643 3456678899999999999999999999999999876543 999999987653
No 84
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.91 E-value=7.4e-23 Score=156.66 Aligned_cols=136 Identities=35% Similarity=0.476 Sum_probs=116.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCC
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~ 111 (179)
.+|+++||||+|+||++++++|+++|++|++++|+++..+...+ ..+.++..+.+|++|.+++.+++++ +++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~----~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~ 78 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEA----LHPDRALARLLDVTDFDAIDAVVADAEATFGP 78 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHh----hcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 47899999999999999999999999999999999876554332 2244677889999999998877665 468
Q ss_pred CcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 112 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+|++|||||.....++.+.+.+++++.+++|+.|++.++++++|.|++++.+ +||++||.++..
T Consensus 79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~---~iv~iSS~~~~~ 142 (277)
T PRK06180 79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRG---HIVNITSMGGLI 142 (277)
T ss_pred CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCC---EEEEEecccccC
Confidence 9999999998877788888999999999999999999999999999876544 899999987754
No 85
>PRK09186 flagellin modification protein A; Provisional
Probab=99.91 E-value=7.3e-23 Score=154.61 Aligned_cols=140 Identities=22% Similarity=0.233 Sum_probs=117.7
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhc-CceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
+++|+++||||+++||+++|++|+++|++|++++|+++..++..+++.... +..+.++.+|++|++++.+++++ +
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 468999999999999999999999999999999999888877777664332 33456679999999998887764 4
Q ss_pred CCCcEEEecCCCCC---CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 110 GPVDVLVVNQGVFV---PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 110 ~~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
+++|++|||||... ..++.+.+.++++..+++|+.+++.++++++|.|++++.+ +||++||.++.
T Consensus 82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---~iv~~sS~~~~ 149 (256)
T PRK09186 82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGG---NLVNISSIYGV 149 (256)
T ss_pred CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCc---eEEEEechhhh
Confidence 77999999997643 2456778999999999999999999999999999876543 99999998764
No 86
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.91 E-value=5.7e-23 Score=155.49 Aligned_cols=140 Identities=25% Similarity=0.308 Sum_probs=113.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChhH-HHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh---hC
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGEK-LEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---AG 110 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g-~~v~~~~r~~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---~~ 110 (179)
.+|+++||||++|||+++|++|+++| ++|++++|+++. .++..+++....+.++.++.+|++|.++++++++. .+
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 46899999999999999999999995 999999999875 77776766554334788899999999987776654 36
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|++|||+|...+..-...++++..+.+++|+.+++.+++.++|.|.+++.+ +|+++||.+|..
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~---~iv~isS~~g~~ 151 (253)
T PRK07904 87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFG---QIIAMSSVAGER 151 (253)
T ss_pred CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCc---eEEEEechhhcC
Confidence 89999999998654322223455566789999999999999999999887654 999999987754
No 87
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.91 E-value=7.3e-23 Score=154.01 Aligned_cols=139 Identities=25% Similarity=0.382 Sum_probs=115.7
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
++++|+++||||+++||+++|++|+++|++|++++|++. ++..+++.. .+.++..+.+|+++.+++++++++ .
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEA-LGRRFLSLTADLSDIEAIKALVDSAVEEF 78 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 368999999999999999999999999999999998753 233333322 345688899999999999877664 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
+++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|.|.+++. .++||++||..+.
T Consensus 79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~ 144 (248)
T TIGR01832 79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGR--GGKIINIASMLSF 144 (248)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--CeEEEEEecHHhc
Confidence 78999999999887777778889999999999999999999999999976541 2389999998654
No 88
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.91 E-value=9.6e-23 Score=153.08 Aligned_cols=139 Identities=23% Similarity=0.275 Sum_probs=121.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh-CCCcEE
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-GPVDVL 115 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~-~~id~l 115 (179)
+|+++||||+++||++++++|+++|++|++++|++++.++..+++....+.++.++++|+++++++++++++. .++|++
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 4789999999999999999999999999999999988777766665545667889999999999999988764 457999
Q ss_pred EecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 116 VVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 116 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
|||+|.....+..+.+.+++.+.+++|+.+++.+++.+.|.|.+++.+ +++++||..+..
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~iv~~sS~~~~~ 140 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSG---TIVGISSVAGDR 140 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCC---EEEEEecccccC
Confidence 999998776777778899999999999999999999999999876654 899999987654
No 89
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.91 E-value=1.5e-22 Score=153.53 Aligned_cols=143 Identities=29% Similarity=0.364 Sum_probs=118.9
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-hHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh---
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG-EKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~--- 108 (179)
.++++|+++||||+++||+++|++|+++|++|++++|+. +..+...+++.. .+.++..+.+|+++.+++++++++
T Consensus 3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~i~~~~~~~~~ 81 (261)
T PRK08936 3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKK-AGGEAIAVKGDVTVESDVVNLIQTAVK 81 (261)
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 347899999999999999999999999999999888854 344445555533 356778899999999998877654
Q ss_pred -hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 -~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||...+.++.+.+.++|++.+++|+.+++.+++.++|.|.+++. .++|+++||..+..
T Consensus 82 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~--~g~iv~~sS~~~~~ 150 (261)
T PRK08936 82 EFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDI--KGNIINMSSVHEQI 150 (261)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CcEEEEEccccccC
Confidence 578999999999877777778899999999999999999999999999987642 24899999986643
No 90
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.91 E-value=2.4e-24 Score=149.73 Aligned_cols=142 Identities=23% Similarity=0.247 Sum_probs=126.7
Q ss_pred CcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCC
Q 030328 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (179)
Q Consensus 32 ~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~ 111 (179)
..++.|+.+++||++.|||+++++.|++.|++|+.+.|+++.+....++.. ..+..+..|+++.+.+.+.+...++
T Consensus 2 ~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p----~~I~Pi~~Dls~wea~~~~l~~v~p 77 (245)
T KOG1207|consen 2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP----SLIIPIVGDLSAWEALFKLLVPVFP 77 (245)
T ss_pred cccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC----cceeeeEecccHHHHHHHhhcccCc
Confidence 456789999999999999999999999999999999999998887777653 3378889999998888888877889
Q ss_pred CcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcccC
Q 030328 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQVG 179 (179)
Q Consensus 112 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~g 179 (179)
+|.++||||.....++.+.+.+++++.|++|+.+++.+.|...+.+..++. .+.|+|+||.++.++
T Consensus 78 idgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~--~GaIVNvSSqas~R~ 143 (245)
T KOG1207|consen 78 IDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQI--KGAIVNVSSQASIRP 143 (245)
T ss_pred hhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccC--CceEEEecchhcccc
Confidence 999999999999999999999999999999999999999998888887765 347999999988753
No 91
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.91 E-value=8.8e-23 Score=154.10 Aligned_cols=134 Identities=28% Similarity=0.375 Sum_probs=114.5
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
++++|+++||||++|||++++++|+++|++|++++|+++. + ..+..+..+.+|+++++++++++++ +
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 73 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----T----VDGRPAEFHAADVRDPDQVAALVDAIVERH 73 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----h----hcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999998754 1 1245678899999999998887655 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||||.....++.+.+.++|++.+++|+.+++.+++.+.|.|.++.. .++||++||.++..
T Consensus 74 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~g~ii~isS~~~~~ 140 (252)
T PRK07856 74 GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPG--GGSIVNIGSVSGRR 140 (252)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CcEEEEEcccccCC
Confidence 78999999999877667777899999999999999999999999999976432 24899999987754
No 92
>PLN00015 protochlorophyllide reductase
Probab=99.91 E-value=7.1e-23 Score=159.09 Aligned_cols=135 Identities=30% Similarity=0.427 Sum_probs=112.8
Q ss_pred EEEcCCCchHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCCCcEE
Q 030328 41 FITGGSSGIGLALAHQAAKEG-ARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVDVL 115 (179)
Q Consensus 41 lItGa~~~iG~~la~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~id~l 115 (179)
+||||++|||++++++|+++| ++|++++|+++..++..+++.. .+.++..+.+|+++.+++++++++ .+++|++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 79 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGM-PKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVL 79 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcC-CCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 699999999999999999999 9999999998877766666532 244677889999999999887765 3689999
Q ss_pred EecCCCCCC-CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 116 VVNQGVFVP-GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 116 i~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
|||||.... .+..+.+.++|++++++|+.|++.+++.++|.|++.+. ..++||++||.++.
T Consensus 80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~-~~g~IV~vsS~~~~ 141 (308)
T PLN00015 80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDY-PSKRLIIVGSITGN 141 (308)
T ss_pred EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-CCCEEEEEeccccc
Confidence 999997543 34567789999999999999999999999999987641 12499999998764
No 93
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.91 E-value=1.6e-22 Score=152.05 Aligned_cols=141 Identities=26% Similarity=0.403 Sum_probs=122.0
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
.+++|+++||||+|+||++++++|+++|++|++++|+++..++..+++.. .+.++..+.+|+++++++++++++ +
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEA-AGGRAHAIAADLADPASVQRFFDAAAAAL 82 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 35789999999999999999999999999999999998877776666543 245688899999999999887765 3
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||+|.....++.+.+.++++..++.|+.+++.+++.+.|.|.+++.+ +++++||..+..
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g---~iv~isS~~~~~ 148 (250)
T PRK12939 83 GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRG---RIVNLASDTALW 148 (250)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe---EEEEECchhhcc
Confidence 789999999998877777888999999999999999999999999999876544 999999976643
No 94
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.91 E-value=1.2e-22 Score=154.97 Aligned_cols=137 Identities=34% Similarity=0.467 Sum_probs=119.8
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCCCc
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVD 113 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~id 113 (179)
|+++||||+|+||++++++|+++|++|++++|+.++.++..+++... +.++..+.+|++++++++++++. .+++|
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA-GGDGFYQRCDVRDYSQLTALAQACEEKWGGID 79 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 47999999999999999999999999999999988877777766533 56788899999999998887654 46899
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|||||.....++.+.+.+++++.+++|+.+++.+++.++|.|++.+.+ +|+++||.++..
T Consensus 80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---~iv~vsS~~~~~ 141 (270)
T PRK05650 80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSG---RIVNIASMAGLM 141 (270)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCC---EEEEECChhhcC
Confidence 99999998887788889999999999999999999999999999876543 899999987754
No 95
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.91 E-value=1.8e-22 Score=152.61 Aligned_cols=140 Identities=24% Similarity=0.341 Sum_probs=119.3
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
.+.+|+++||||+++||++++++|+++|+++++++|+.+..++..+++.. .+.++..+.+|+++.++++++++. .
T Consensus 8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ-LGGQAFACRCDITSEQELSALADFALSKL 86 (255)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46799999999999999999999999999999999998887776666643 355778889999999998876654 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||||...+.++ +.+.++|+..+++|+.+++++++.+.|.|.+.+.+ +||++||.++..
T Consensus 87 ~~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~iv~isS~~~~~ 151 (255)
T PRK06113 87 GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGG---VILTITSMAAEN 151 (255)
T ss_pred CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCc---EEEEEecccccC
Confidence 789999999997665554 57889999999999999999999999999765443 899999988754
No 96
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.91 E-value=6.6e-23 Score=155.68 Aligned_cols=136 Identities=33% Similarity=0.464 Sum_probs=113.0
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
+++|+++||||++|||+++|++|+++|++|++++|+++..++..+++ +.++..+.+|+++.+++++++++ ++
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 79 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF----GDHVLVVEGDVTSYADNQRAVDQTVDAFG 79 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCcceEEEccCCCHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999988776655443 34577889999999998877654 57
Q ss_pred CCcEEEecCCCCC-CCCcccCCHHH----HHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 111 PVDVLVVNQGVFV-PGELEVQSLDE----VRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 111 ~id~li~~ag~~~-~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|++|||||... ..++.+.++++ |++++++|+.+++.+++.++|.|++++ ++||++||.++..
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----g~iv~~sS~~~~~ 148 (263)
T PRK06200 80 KLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG----GSMIFTLSNSSFY 148 (263)
T ss_pred CCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC----CEEEEECChhhcC
Confidence 8999999999754 34555556554 889999999999999999999987643 3899999987754
No 97
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.91 E-value=1.5e-22 Score=152.37 Aligned_cols=139 Identities=26% Similarity=0.330 Sum_probs=118.4
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEE-EecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSI-LARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
+.+|+++||||+|+||++++++|+++|++|++ .+|+.+..++..+++.. .+.++..+.+|+++++++++++++ +
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEA-LGRKALAVKANVGDVEKIKEMFAQIDEEF 80 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999876 47777766666666543 356788899999999999887765 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
+++|++|||||.....++.+.+.++++..+++|+.+++.+++++.|.|.+++.+ +||++||..+.
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g---~iv~~sS~~~~ 145 (250)
T PRK08063 81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGG---KIISLSSLGSI 145 (250)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCe---EEEEEcchhhc
Confidence 789999999998877788888999999999999999999999999999876543 99999997654
No 98
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.91 E-value=9.3e-23 Score=154.89 Aligned_cols=137 Identities=20% Similarity=0.271 Sum_probs=106.7
Q ss_pred cCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 35 IKDRHVFITGG--SSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 35 ~~~k~vlItGa--~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
+++|+++|||| ++|||+++|++|+++|++|++++|..+..+. .+++....+. ...+.+|++|++++++++++
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR-ITEFAAEFGS-DLVFPCDVASDEQIDALFASLGQH 81 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHH-HHHHHHhcCC-cceeeccCCCHHHHHHHHHHHHHH
Confidence 57899999996 6899999999999999999998765332222 2223222222 24678999999999887765
Q ss_pred hCCCcEEEecCCCCCCC----C-cccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 AGPVDVLVVNQGVFVPG----E-LEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 ~~~id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||..... + +++.+.++|+..+++|+.+++.+++.++|+|.+ + ++|+++||.++..
T Consensus 82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--~---g~Ii~iss~~~~~ 151 (260)
T PRK06997 82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD--D---ASLLTLSYLGAER 151 (260)
T ss_pred hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--C---ceEEEEecccccc
Confidence 58999999999976432 2 346788999999999999999999999999942 2 3899999987754
No 99
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.91 E-value=1.5e-22 Score=153.12 Aligned_cols=139 Identities=28% Similarity=0.362 Sum_probs=118.6
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
.+.+|+++||||+++||.++|++|+++|++|++++|+.+..++..+++ +..+..+.+|+++.+++++++++ +
T Consensus 3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07067 3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI----GPAAIAVSLDVTRQDSIDRIVAAAVERF 78 (257)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh----CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 367899999999999999999999999999999999988776655543 34577889999999999887765 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||||.....++.+.+.++++..+++|+.+++.+++++.+.|.++.. .++||++||..+..
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~~iv~~sS~~~~~ 145 (257)
T PRK07067 79 GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGR--GGKIINMASQAGRR 145 (257)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCC--CcEEEEeCCHHhCC
Confidence 78999999999877777888899999999999999999999999999976542 24899999976543
No 100
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.91 E-value=1.7e-22 Score=152.67 Aligned_cols=139 Identities=34% Similarity=0.451 Sum_probs=116.7
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
+++++|+++||||+++||.++|++|+++|++|++++|+++.. +..+++ .+..+..+.+|+++.+++++++++
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQL---LGGNAKGLVCDVSDSQSVEAAVAAVISA 86 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHh---hCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999987632 222222 234567899999999998887665
Q ss_pred hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||+|.....++.+.+.+++++.+++|+.+++.+++.+.|.|++++.+ +|+++||..+..
T Consensus 87 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~iv~~sS~~~~~ 153 (255)
T PRK06841 87 FGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGG---KIVNLASQAGVV 153 (255)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCc---eEEEEcchhhcc
Confidence 4689999999998777777778899999999999999999999999999876543 999999987653
No 101
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.91 E-value=2.5e-22 Score=150.39 Aligned_cols=141 Identities=35% Similarity=0.575 Sum_probs=120.9
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
.+++++++|||++|+||++++++|+++|++|++++|++++.++..+++.. .+.++..+.+|+++++++++++++ .
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEA-YGVKVVIATADVSDYEEVTAAIEQLKNEL 82 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-hCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35789999999999999999999999999999999998877766666643 356788899999999998887764 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||+|....+++.+.+++++++.+++|+.+++.+++.+.|.|.+...+ +++++||..+..
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~iv~~ss~~~~~ 148 (239)
T PRK07666 83 GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSG---DIINISSTAGQK 148 (239)
T ss_pred CCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCc---EEEEEcchhhcc
Confidence 689999999998766677778999999999999999999999999999776543 899999987653
No 102
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.91 E-value=1.6e-22 Score=154.68 Aligned_cols=136 Identities=32% Similarity=0.454 Sum_probs=117.1
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCC
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~ 111 (179)
.+|+++||||+|+||++++++|+++|++|++++|+++..++..+.. +..+..+.+|+++.+++++++++ .++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY----GDRLLPLALDVTDRAAVFAAVETAVEHFGR 77 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----cCCeeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999999987765544332 34577889999999998877655 478
Q ss_pred CcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 112 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+|++|||||....+++.+.+.+++++.+++|+.+++.+++.++|.|++++.+ ++|++||.++..
T Consensus 78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~iv~vsS~~~~~ 141 (275)
T PRK08263 78 LDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSG---HIIQISSIGGIS 141 (275)
T ss_pred CCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC---EEEEEcChhhcC
Confidence 9999999999888888889999999999999999999999999999876543 899999987653
No 103
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.91 E-value=2e-22 Score=152.60 Aligned_cols=140 Identities=28% Similarity=0.415 Sum_probs=120.3
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
.+++|+++||||+|+||++++++|+++|++|++++|++++.++..+++.. .+.++..+.+|+++.+++++++++ .
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINK-AGGKAIGVAMDVTNEDAVNAGIDKVAERF 82 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHh-cCceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35789999999999999999999999999999999999887777776643 356788899999999999887765 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHH-HhccCCCCcEEEEecccCcc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLI-KKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~~~~~iv~iss~~g~ 177 (179)
+++|++|||||.....+..+.+.++++..+++|+.+++.+++.+++.| ++.+ .++|+++||..+.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~---~~~iv~~ss~~~~ 148 (262)
T PRK13394 83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR---GGVVIYMGSVHSH 148 (262)
T ss_pred CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC---CcEEEEEcchhhc
Confidence 689999999998877777778889999999999999999999999999 5433 3499999997654
No 104
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.90 E-value=8.4e-23 Score=155.10 Aligned_cols=137 Identities=32% Similarity=0.487 Sum_probs=110.4
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
++++|+++||||++|||+++|++|+++|++|++++|+++..++..+. .+.++..+.+|+++.+++++++++ +
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA----HGDAVVGVEGDVRSLDDHKEAVARCVAAF 77 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh----cCCceEEEEeccCCHHHHHHHHHHHHHHh
Confidence 35799999999999999999999999999999999998766554332 245678889999999888776654 5
Q ss_pred CCCcEEEecCCCCCC-CCcccCCH----HHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVP-GELEVQSL----DEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~-~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||||.... .++.+.+. ++|++.+++|+.+++.+++++.|.|.+.+ + ++|++||.++..
T Consensus 78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g---~iv~~sS~~~~~ 147 (262)
T TIGR03325 78 GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-G---SVIFTISNAGFY 147 (262)
T ss_pred CCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-C---CEEEEeccceec
Confidence 899999999997532 23333333 57999999999999999999999997643 3 788998887654
No 105
>PRK06128 oxidoreductase; Provisional
Probab=99.90 E-value=1.6e-22 Score=156.48 Aligned_cols=139 Identities=27% Similarity=0.344 Sum_probs=114.4
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChh--HHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh---
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGE--KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~--- 108 (179)
.+++|++|||||++|||++++++|+++|++|++++++.+ ..++..+.+.. .+.++..+.+|+++.+++++++++
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 130 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQA-EGRKAVALPGDLKDEAFCRQLVERAVK 130 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 367899999999999999999999999999998887543 33444444432 356788899999999998887665
Q ss_pred -hCCCcEEEecCCCCC-CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 -AGPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 -~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+ + ++||++||.++..
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~---~~iv~~sS~~~~~ 197 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--G---ASIINTGSIQSYQ 197 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--C---CEEEEECCccccC
Confidence 478999999999754 456778899999999999999999999999999854 2 2899999987653
No 106
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.90 E-value=2.7e-22 Score=151.16 Aligned_cols=140 Identities=48% Similarity=0.696 Sum_probs=128.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCce-EEEEEeeCCCHHHHHHHHHhh----CCC
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIE-VATYSADVRDFDAVKTALDEA----GPV 112 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-v~~~~~D~~~~~~v~~~~~~~----~~i 112 (179)
++++|||+++|+|+++|.++..+|++|.++.|+.+.+++..+++....+.. +.+..+|+.|.++++..+++. +++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 899999999999999999999999999999999999999999887655444 889999999999999988875 799
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcccC
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQVG 179 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~g 179 (179)
|.+|+|||...++.+.+.++++++..+++|+.|+++.+++.+|.|+++.+ .++|+.+||.++..|
T Consensus 114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~--~g~I~~vsS~~a~~~ 178 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREH--LGRIILVSSQLAMLG 178 (331)
T ss_pred ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhcccc--CcEEEEehhhhhhcC
Confidence 99999999999999999999999999999999999999999999988764 339999999987654
No 107
>PRK07985 oxidoreductase; Provisional
Probab=99.90 E-value=2.1e-22 Score=155.49 Aligned_cols=138 Identities=29% Similarity=0.418 Sum_probs=112.8
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh--hHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG--EKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
+++|+++||||++|||+++|++|+++|++|++++|+. +..++..+.+. ..+.++..+.+|+++.+++.+++++
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIE-ECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHH-HcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999999988653 23444433332 2356678899999999998877654
Q ss_pred hCCCcEEEecCCCCC-CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 AGPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||... ..++.+.++++|++.+++|+.+++.+++++.|.|.+. ++||++||.++..
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----g~iv~iSS~~~~~ 191 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-----ASIITTSSIQAYQ 191 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-----CEEEEECCchhcc
Confidence 578999999999753 3567788999999999999999999999999998542 3899999987754
No 108
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.90 E-value=1.5e-22 Score=153.28 Aligned_cols=140 Identities=29% Similarity=0.382 Sum_probs=115.9
Q ss_pred CcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh---
Q 030328 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (179)
Q Consensus 32 ~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~--- 108 (179)
..++++|+++||||+++||+++|++|+++|++|++++|+++.. +..+++.. .+.++..+.+|+++.+++++++++
T Consensus 2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (258)
T PRK08628 2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRA-LQPRAEFVQVDLTDDAQCRDAVEQTVA 79 (258)
T ss_pred CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999999988765 44455533 355688899999999998887765
Q ss_pred -hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 -~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||......+++.+ ++|+..+++|+.+++.+++.+.|.|++.. ++|+++||..+..
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~iv~~ss~~~~~ 145 (258)
T PRK08628 80 KFGRIDGLVNNAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKASR----GAIVNISSKTALT 145 (258)
T ss_pred hcCCCCEEEECCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhccC----cEEEEECCHHhcc
Confidence 47899999999976555555444 89999999999999999999999887543 3899999987654
No 109
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.90 E-value=2.4e-22 Score=153.44 Aligned_cols=139 Identities=28% Similarity=0.446 Sum_probs=116.9
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCCCc
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVD 113 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~id 113 (179)
|+++||||++|||++++++|+++|++|++++|+++..++..+++....+.....+.+|+++++++++++++ .+++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 57999999999999999999999999999999988777776666543333345578999999998877655 47899
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|||+|.....++.+.+.++++..+++|+.+++.+++.++|.|.+.+. .++|+++||..+..
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~g~ii~isS~~~~~ 143 (272)
T PRK07832 81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGR--GGHLVNVSSAAGLV 143 (272)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--CcEEEEEccccccC
Confidence 9999999877677888999999999999999999999999999976532 24999999987653
No 110
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.90 E-value=8.7e-23 Score=158.38 Aligned_cols=140 Identities=24% Similarity=0.335 Sum_probs=116.9
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhh-cCceEEEEEeeCCCHHHHHHHHHh---
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLA-TGIEVATYSADVRDFDAVKTALDE--- 108 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~v~~~~~~--- 108 (179)
.++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++... .+.++.++.+|++|.+++++++++
T Consensus 12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 91 (306)
T PRK06197 12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA 91 (306)
T ss_pred ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 3568999999999999999999999999999999999988777666665432 245688899999999999887765
Q ss_pred -hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 109 -~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
++++|++|||||...+. .+.+.++++..+++|+.|++.+++.++|.|++.+.+ +||++||.++.
T Consensus 92 ~~~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~---~iV~vSS~~~~ 156 (306)
T PRK06197 92 AYPRIDLLINNAGVMYTP--KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGS---RVVTVSSGGHR 156 (306)
T ss_pred hCCCCCEEEECCccccCC--CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCC---EEEEECCHHHh
Confidence 47899999999976532 345678889999999999999999999999876543 99999997643
No 111
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.90 E-value=1.8e-22 Score=152.99 Aligned_cols=137 Identities=26% Similarity=0.320 Sum_probs=114.9
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCCCc
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVD 113 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~id 113 (179)
++++||||++|||+++|++|+++|++|++++|+++..++..+++... .++..+.+|++|++++++++++ ++++|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id 78 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY--GEVYAVKADLSDKDDLKNLVKEAWELLGGID 78 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 37999999999999999999999999999999998887777776432 3577899999999999887754 57899
Q ss_pred EEEecCCCCC--CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 114 VLVVNQGVFV--PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 114 ~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|||||... +.++.+.+.++|.+.+++|+.+++.+++.++|.|.+++. .++||++||.++..
T Consensus 79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~--~g~iv~isS~~~~~ 143 (259)
T PRK08340 79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKM--KGVLVYLSSVSVKE 143 (259)
T ss_pred EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCC--CCEEEEEeCcccCC
Confidence 9999999754 335667888999999999999999999999998864322 24999999987753
No 112
>PRK06484 short chain dehydrogenase; Validated
Probab=99.90 E-value=1.4e-22 Score=167.40 Aligned_cols=135 Identities=34% Similarity=0.427 Sum_probs=115.8
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
..+|+++||||++|||+++|++|+++|++|++++|++++.++..+++ +.++..+.+|++|++++++++++ ++
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 342 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL----GDEHLSVQADITDEAAVESAFAQIQARWG 342 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999999988776665543 45567789999999998887654 58
Q ss_pred CCcEEEecCCCCC-CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 111 PVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 111 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|++|||||... ..++.+.+.++|++++++|+.+++++++.++|.|. +. ++||++||.++..
T Consensus 343 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~---g~iv~isS~~~~~ 406 (520)
T PRK06484 343 RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS--QG---GVIVNLGSIASLL 406 (520)
T ss_pred CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc--cC---CEEEEECchhhcC
Confidence 9999999999864 35677889999999999999999999999999992 22 3999999998764
No 113
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.90 E-value=3.1e-22 Score=150.59 Aligned_cols=140 Identities=31% Similarity=0.410 Sum_probs=119.1
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
.+++|+++||||+|+||.+++++|+++|++|++++|+++..++...++.. +.++.++.+|+++.+++++++++ .
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA--GGRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 35789999999999999999999999999999999998877766555533 45688899999999999887654 4
Q ss_pred CCCcEEEecCCCCC-CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++||++|... ..++.+.+.+++++.+++|+.+++.+++.+.+.|.+++. ++|+++||..+..
T Consensus 80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~~iv~~sS~~~~~ 146 (251)
T PRK07231 80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGG---GAIVNVASTAGLR 146 (251)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC---cEEEEEcChhhcC
Confidence 78999999999754 345777889999999999999999999999999987554 3899999987643
No 114
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.90 E-value=2.9e-22 Score=151.31 Aligned_cols=140 Identities=34% Similarity=0.472 Sum_probs=121.8
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
+++|+++|||++|+||++++++|+++|++|++++|+++..++..+++.. .+.++..+.+|+++.++++++++. ++
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQK-AGGKAIGVAMDVTDEEAINAGIDYAVETFG 80 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999999998887776666543 356788899999999999887765 46
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|++|||||.....+..+.+.++++..+++|+.+++.+++.++|.|++++. ++|+++||..+..
T Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~~iv~iss~~~~~ 145 (258)
T PRK12429 81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGG---GRIINMASVHGLV 145 (258)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCC---eEEEEEcchhhcc
Confidence 8999999999887777788899999999999999999999999999987654 3999999987654
No 115
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.90 E-value=3.9e-22 Score=150.18 Aligned_cols=140 Identities=29% Similarity=0.364 Sum_probs=117.4
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
.+++|+++||||+|+||++++++|+++|++|++++|+++..+...+++... +.++..+.+|+++.+++++++++ .
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD-GGTAIAVQVDVSDPDSAKAMADATVSAF 81 (250)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 357899999999999999999999999999999999987766666555432 34567789999999998776654 4
Q ss_pred CCCcEEEecCCCCC---CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 110 GPVDVLVVNQGVFV---PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 110 ~~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
+++|++|||||... ..++.+.+.+++++.+++|+.+++.++++++|.|.+.+.+ +|+++||.++.
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~iv~~sS~~~~ 149 (250)
T PRK07774 82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGG---AIVNQSSTAAW 149 (250)
T ss_pred CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCc---EEEEEeccccc
Confidence 78999999999764 3456677889999999999999999999999999876543 99999998764
No 116
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.90 E-value=1.3e-22 Score=154.63 Aligned_cols=131 Identities=35% Similarity=0.484 Sum_probs=113.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCC
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~ 111 (179)
.+++++||||+|+||++++++|+++|++|++++|++++.+. ...+..+.+|++|+++++++++. +++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 73 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP---------IPGVELLELDVTDDASVQAAVDEVIARAGR 73 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---------cCCCeeEEeecCCHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999999999999998754321 13467789999999999887765 478
Q ss_pred CcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 112 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+|++|||||.....++.+.+.++++..+++|+.|++.+++.++|.|++++.+ +||++||.++..
T Consensus 74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~---~iv~isS~~~~~ 137 (270)
T PRK06179 74 IDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSG---RIINISSVLGFL 137 (270)
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc---eEEEECCccccC
Confidence 9999999998877788888999999999999999999999999999876544 999999987754
No 117
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.90 E-value=3.8e-22 Score=149.96 Aligned_cols=140 Identities=25% Similarity=0.387 Sum_probs=115.1
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILA-RSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
+++|+++|||++++||+++|++|+++|++|++.. ++.+..++..+++.. .+.++..+.+|++|.+++++++++ .
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKA-LGFDFIASEGNVGDWDSTKAAFDKVKAEV 79 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 3689999999999999999999999999988754 444444444444432 356677889999999998877654 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||||.....++.+.++++|++++++|+.+++.+++.+.|.|.+.+. ++|+++||..+..
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~---~~iv~isS~~~~~ 145 (246)
T PRK12938 80 GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGW---GRIINISSVNGQK 145 (246)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC---eEEEEEechhccC
Confidence 78999999999877667788899999999999999999999999999976543 3899999987654
No 118
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.90 E-value=1.6e-22 Score=153.28 Aligned_cols=132 Identities=20% Similarity=0.284 Sum_probs=107.8
Q ss_pred CcCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecCh--hHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh-
Q 030328 34 PIKDRHVFITGG--SSGIGLALAHQAAKEGARVSILARSG--EKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (179)
Q Consensus 34 ~~~~k~vlItGa--~~~iG~~la~~l~~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~- 108 (179)
.+++|+++|||| ++|||+++|++|+++|++|++++|+. +..++..+++ +.++..+.+|++|++++++++++
T Consensus 4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~i~~~~~~~ 79 (256)
T PRK07889 4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL----PEPAPVLELDVTNEEHLASLADRV 79 (256)
T ss_pred cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc----CCCCcEEeCCCCCHHHHHHHHHHH
Confidence 467899999999 89999999999999999999998764 3334333332 23567789999999999887654
Q ss_pred ---hCCCcEEEecCCCCCC----CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEeccc
Q 030328 109 ---AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (179)
Q Consensus 109 ---~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~ 174 (179)
++++|++|||||.... .++.+.+.++|++.+++|+.+++.+++.++|.|++ ++ +|+++|+.
T Consensus 80 ~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g---~Iv~is~~ 147 (256)
T PRK07889 80 REHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GG---SIVGLDFD 147 (256)
T ss_pred HHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--Cc---eEEEEeec
Confidence 5789999999997643 35667789999999999999999999999999963 23 88888764
No 119
>PRK06196 oxidoreductase; Provisional
Probab=99.90 E-value=1.7e-22 Score=157.39 Aligned_cols=133 Identities=26% Similarity=0.399 Sum_probs=112.1
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
++++|+++||||++|||+++|++|+++|++|++++|++++.++..+++. ++..+.+|++|.+++++++++ .
T Consensus 23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~-----~v~~~~~Dl~d~~~v~~~~~~~~~~~ 97 (315)
T PRK06196 23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID-----GVEVVMLDLADLESVRAFAERFLDSG 97 (315)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----hCeEEEccCCCHHHHHHHHHHHHhcC
Confidence 4678999999999999999999999999999999999887766655542 267789999999999887765 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
+++|++|||||..... .+.+.++|+..+++|+.+++.+++.++|.|.+.+. ++||++||..+
T Consensus 98 ~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~---~~iV~vSS~~~ 159 (315)
T PRK06196 98 RRIDILINNAGVMACP--ETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAG---ARVVALSSAGH 159 (315)
T ss_pred CCCCEEEECCCCCCCC--CccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCC---CeEEEECCHHh
Confidence 7899999999975432 34567889999999999999999999999987643 39999999754
No 120
>PRK12743 oxidoreductase; Provisional
Probab=99.90 E-value=5e-22 Score=150.39 Aligned_cols=140 Identities=25% Similarity=0.327 Sum_probs=116.1
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
.+|+++||||+++||++++++|+++|++|+++++ +.+..++..+++.. .+.++..+.+|+++++++++++++ ++
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRS-HGVRAEIRQLDLSDLPEGAQALDKLIQRLG 79 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999999988865 44555555555543 356788899999999998777654 57
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++.+.|.+++. .++||++||..+..
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~g~ii~isS~~~~~ 145 (256)
T PRK12743 80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQ--GGRIINITSVHEHT 145 (256)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CeEEEEEeeccccC
Confidence 8999999999877667777899999999999999999999999999976532 24899999987643
No 121
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.90 E-value=4.8e-22 Score=149.47 Aligned_cols=140 Identities=31% Similarity=0.459 Sum_probs=117.7
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
+++|+++|||++++||.++|++|+++|++|+++++ +++..++..+++.. .+.++.++.+|+++++++++++++ +
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGK-EGHDVYAVQADVSKVEDANRLVEEAVNHF 82 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56899999999999999999999999999987665 44555555555542 356788899999999999887766 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||||......+.+.+.+++++.+++|+.+++.++++++|.|.++..+ +++++||..+..
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~iv~~sS~~~~~ 148 (247)
T PRK12935 83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEG---RIISISSIIGQA 148 (247)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc---EEEEEcchhhcC
Confidence 789999999998777777778899999999999999999999999999766543 999999987654
No 122
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.90 E-value=4e-22 Score=152.61 Aligned_cols=139 Identities=29% Similarity=0.422 Sum_probs=118.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhc-CceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
++|+++||||+|++|++++++|+++|++|++++|+++..++..+++.... +.++..+.+|++|++++++ +++ .+
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~ 80 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG 80 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence 57899999999999999999999999999999999887776665554322 3468889999999999876 443 57
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|++|||||......+.+.+.+++++.+++|+.+++.+++.++|.|++.+.+ +|+++||..+..
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~iv~vsS~~~~~ 145 (280)
T PRK06914 81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSG---KIINISSISGRV 145 (280)
T ss_pred CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC---EEEEECcccccC
Confidence 89999999998877777888999999999999999999999999999876543 899999986654
No 123
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.90 E-value=5e-22 Score=150.52 Aligned_cols=139 Identities=31% Similarity=0.447 Sum_probs=117.6
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
+++|+++||||+|+||.++|++|+++|++|++++|+.++.+...+++.. .+.++..+.+|++|++++++++++ .+
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~-~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEA-LGIDALWIAADVADEADIERLAEETLERFG 88 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5789999999999999999999999999999999998877766665543 345677899999999999776654 47
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHH-HHhccCCCCcEEEEecccCcc
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPL-IKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~~~~~iv~iss~~g~ 177 (179)
++|++|||||.....+..+.+.+.|++.+++|+.+++.+++++.|. |.+++. ++++++||..+.
T Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~---~~~v~~sS~~~~ 153 (259)
T PRK08213 89 HVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGY---GRIINVASVAGL 153 (259)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCC---eEEEEECChhhc
Confidence 8999999999876667777889999999999999999999999998 655433 489999997654
No 124
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.90 E-value=4.8e-22 Score=148.93 Aligned_cols=142 Identities=25% Similarity=0.375 Sum_probs=116.4
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCC--HHHHHHHHH----
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRD--FDAVKTALD---- 107 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~v~~~~~---- 107 (179)
++++|+++||||+++||++++++|+++|++|++++|++++.++..+++....+.++..+.+|+++ .++++++++
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~ 82 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE 82 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999999888777777654434456778899875 445555443
Q ss_pred hh-CCCcEEEecCCCCC-CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 108 EA-GPVDVLVVNQGVFV-PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 108 ~~-~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+. +++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.+.|.|.+.+.+ +++++||..+..
T Consensus 83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~---~iv~~ss~~~~~ 152 (239)
T PRK08703 83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDA---SVIFVGESHGET 152 (239)
T ss_pred HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCC---EEEEEecccccc
Confidence 34 68999999999754 3567788999999999999999999999999999876543 899999987654
No 125
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.90 E-value=4.4e-22 Score=149.26 Aligned_cols=138 Identities=34% Similarity=0.468 Sum_probs=118.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCC
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~ 111 (179)
++|+++|||++|++|++++++|+++|++|++++|+++..++..+++.. .+.++.++.+|+++++++.+.++. +++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRS-TGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-CCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999999999999998877766665543 345688899999999998776654 578
Q ss_pred CcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 112 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
+|++|||+|.....++.+.+.++++..+++|+.+++.+++.+.|.|.+++.+ +|+++||..+.
T Consensus 84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---~iv~isS~~~~ 146 (241)
T PRK07454 84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGG---LIINVSSIAAR 146 (241)
T ss_pred CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCc---EEEEEccHHhC
Confidence 9999999998777777788899999999999999999999999999876543 99999998754
No 126
>PRK06484 short chain dehydrogenase; Validated
Probab=99.90 E-value=3.2e-22 Score=165.30 Aligned_cols=138 Identities=30% Similarity=0.458 Sum_probs=117.7
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
.++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++..+.+|+++++++++++++ ++
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL----GPDHHALAMDVSDEAQIREGFEQLHREFG 78 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEeccCCHHHHHHHHHHHHHHhC
Confidence 47899999999999999999999999999999999988776655544 45677899999999998887755 57
Q ss_pred CCcEEEecCCCCC--CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 111 PVDVLVVNQGVFV--PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 111 ~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|.|.+++.+ .+||++||.++..
T Consensus 79 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g--~~iv~isS~~~~~ 146 (520)
T PRK06484 79 RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHG--AAIVNVASGAGLV 146 (520)
T ss_pred CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC--CeEEEECCcccCC
Confidence 8999999999743 2456778999999999999999999999999999775432 3899999988764
No 127
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.90 E-value=4.4e-22 Score=149.72 Aligned_cols=135 Identities=34% Similarity=0.474 Sum_probs=113.7
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
+++|+++||||+++||++++++|+++|++|++++|+++..++..+++ +.++..+.+|+++.+++.++++. .+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL----GESALVIRADAGDVAAQKALAQALAEAFG 79 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 57899999999999999999999999999999999877665544433 45677889999999988776553 47
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|++|||||.....++.+.+.++++..+++|+.+++.+++++.|.|.+. ++++++||.++..
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~i~~~S~~~~~ 142 (249)
T PRK06500 80 RLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANP-----ASIVLNGSINAHI 142 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-----CEEEEEechHhcc
Confidence 89999999998776777788999999999999999999999999988532 2788888876543
No 128
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.90 E-value=6.1e-22 Score=152.67 Aligned_cols=141 Identities=35% Similarity=0.462 Sum_probs=116.0
Q ss_pred CcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChh-HHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh--
Q 030328 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGE-KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (179)
Q Consensus 32 ~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~-- 108 (179)
...+++|+++||||+++||.+++++|+++|++|++++|+.+ ..++..+.+. ..+.++.++.+|+++.+++++++++
T Consensus 41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~i~ 119 (290)
T PRK06701 41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVE-KEGVKCLLIPGDVSDEAFCKDAVEETV 119 (290)
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999864 3444444332 2356788899999999998887765
Q ss_pred --hCCCcEEEecCCCCCC-CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 --AGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 --~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
.+++|++|||||.... .++.+.+.++|.+++++|+.+++.+++++.+.|++. +++|++||.++..
T Consensus 120 ~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~-----g~iV~isS~~~~~ 187 (290)
T PRK06701 120 RELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG-----SAIINTGSITGYE 187 (290)
T ss_pred HHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhC-----CeEEEEecccccC
Confidence 4789999999997643 567778999999999999999999999999988542 2899999987654
No 129
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.90 E-value=2.9e-22 Score=149.85 Aligned_cols=135 Identities=17% Similarity=0.246 Sum_probs=110.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCCC
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~i 112 (179)
+|+++||||++|||++++++|+++|++|++++|++++.. +++.. .+ +..+.+|+++.+++++++++ ++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~-~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~i 75 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQ-AG--AQCIQADFSTNAGIMAFIDELKQHTDGL 75 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHH-cC--CEEEEcCCCCHHHHHHHHHHHHhhCCCc
Confidence 689999999999999999999999999999999876432 22221 12 56789999999999887765 4679
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
|++|||||........+.+.++|++++++|+.+++.+++.+.|.|.+.+. ..++|+++||.++..
T Consensus 76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~-~~g~iv~~ss~~~~~ 140 (236)
T PRK06483 76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGH-AASDIIHITDYVVEK 140 (236)
T ss_pred cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCC-CCceEEEEcchhhcc
Confidence 99999999765555566788999999999999999999999999987541 124899999987643
No 130
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.90 E-value=4.7e-22 Score=150.66 Aligned_cols=133 Identities=25% Similarity=0.337 Sum_probs=111.9
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
.++++|+++||||++|||++++++|+++|++|++++|+++.. .+.++.++.+|++|.+++++++++
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD----------LPEGVEFVAADLTTAEGCAAVARAVLER 74 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh----------cCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence 347899999999999999999999999999999999986531 134577889999999998876544
Q ss_pred hCCCcEEEecCCCCC--CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 AGPVDVLVVNQGVFV--PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 ~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+ +||++||..+..
T Consensus 75 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g---~ii~isS~~~~~ 143 (260)
T PRK06523 75 LGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSG---VIIHVTSIQRRL 143 (260)
T ss_pred cCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCc---EEEEEecccccC
Confidence 578999999999653 3456678899999999999999999999999999876543 899999987653
No 131
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.90 E-value=6.5e-22 Score=151.24 Aligned_cols=134 Identities=36% Similarity=0.538 Sum_probs=114.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCCC
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~i 112 (179)
.|+++||||+|+||++++++|+++|++|++++|+++..++..++. +.++.++.+|++|.+++++++++ .+++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY----GDRLWVLQLDVTDSAAVRAVVDRAFAALGRI 77 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999999999999987665544332 34678889999999998877654 5789
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
|++|||||.....+..+.+++++++.+++|+.+++.++++++|.|++++.+ +||++||..+.
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~---~iv~~sS~~~~ 139 (276)
T PRK06482 78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGG---RIVQVSSEGGQ 139 (276)
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC---EEEEEcCcccc
Confidence 999999998877777778899999999999999999999999999776543 89999998764
No 132
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.90 E-value=7.6e-22 Score=148.50 Aligned_cols=140 Identities=34% Similarity=0.499 Sum_probs=119.9
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
+++|+++||||+|+||++++++|+++|++|++++|+.+..++..+++.. .+.++..+.+|+++.++++++++. .+
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 79 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRA-KGGNAQAFACDITDRDSVDTAVAAAEQALG 79 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999999999999998877766665543 255688899999999998887654 46
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|++||++|.....++.+.+.++++..+++|+.+++.+++.+.|.|++.+. .+|+++||.++..
T Consensus 80 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~~ii~iss~~~~~ 144 (250)
T TIGR03206 80 PVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGA---GRIVNIASDAARV 144 (250)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC---eEEEEECchhhcc
Confidence 8999999999876677777889999999999999999999999999977643 3899999987653
No 133
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.90 E-value=6.7e-22 Score=150.07 Aligned_cols=137 Identities=34% Similarity=0.515 Sum_probs=116.2
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
+++|+++||||+++||++++++|+++|++|++++|+++ .++..+++. ..+.++..+.+|+++++++++++++ ++
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELC-GRGHRCTAVVADVRDPASVAAAIKRAKEKEG 81 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHH-HhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999999999999999875 333334443 2356678899999999998887765 47
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
++|++|||||.....++.+.+.+++++.+++|+.+++.+++.+.|.|.+.+.+ +|+++||..+
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---~iv~isS~~~ 144 (263)
T PRK08226 82 RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDG---RIVMMSSVTG 144 (263)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc---EEEEECcHHh
Confidence 89999999998777778888999999999999999999999999998765443 8999999765
No 134
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.90 E-value=5.1e-22 Score=151.70 Aligned_cols=130 Identities=29% Similarity=0.385 Sum_probs=110.8
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCCCc
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVD 113 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~id 113 (179)
|+++||||+||||++++++|+++|++|++++|++++.++..+ ..+..+.+|+++.++++++++. .+++|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 74 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA-------AGFTAVQLDVNDGAALARLAEELEAEHGGLD 74 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 789999999999999999999999999999999876543321 1256788999999998877765 47899
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|||||....+++.+.+.++++..+++|+.|++.+++.++|.|++.. ++|+++||.++..
T Consensus 75 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~----g~iv~isS~~~~~ 135 (274)
T PRK05693 75 VLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSR----GLVVNIGSVSGVL 135 (274)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC----CEEEEECCccccC
Confidence 999999987777777889999999999999999999999999997542 3899999988754
No 135
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.89 E-value=8.7e-22 Score=148.58 Aligned_cols=138 Identities=32% Similarity=0.441 Sum_probs=118.7
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCCCc
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVD 113 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~id 113 (179)
|+++|||++|+||++++++|+++|++|++++|++++.++..+++.. .+.++..+.+|+++++++.+++++ .+++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id 79 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQ-AGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFD 79 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 6899999999999999999999999999999998777766666543 356788899999999998887654 47899
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|||+|.....++.+.+.+++++.+++|+.+++.+++.+.+.|++.+.+ ++++++||..+..
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~~~ 142 (254)
T TIGR02415 80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHG--GKIINAASIAGHE 142 (254)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCC--eEEEEecchhhcC
Confidence 99999998777777888999999999999999999999999999876532 4899999987654
No 136
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.89 E-value=8.6e-22 Score=147.70 Aligned_cols=138 Identities=28% Similarity=0.402 Sum_probs=116.9
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
++++|+++||||+|+||++++++|+++|+.|++.+|+.++.++..+++ +.++..+.+|+++.+++++++++ +
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL----GERVKIFPANLSDRDEVKALGQKAEADL 78 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999999999887766554432 44677889999999999887654 5
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||||.....++.+.++++++..+++|+.+++++++++.+.+.+++.+ +||++||..+..
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~iv~~sS~~~~~ 144 (245)
T PRK12936 79 EGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYG---RIINITSVVGVT 144 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCC---EEEEECCHHhCc
Confidence 789999999998776677778889999999999999999999999988765443 899999987654
No 137
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.89 E-value=6e-22 Score=149.78 Aligned_cols=135 Identities=34% Similarity=0.415 Sum_probs=113.2
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
+++|+++||||+|+||.+++++|+++|++|++++|+.+..++..+++. . ..+.+|+++.+++++++++ .+
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~--~~~~~D~~~~~~~~~~~~~~~~~~~ 78 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG----G--LFVPTDVTDEDAVNALFDTAAETYG 78 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC----C--cEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 689999999999999999999999999999999998876655444331 1 4678999999999888765 36
Q ss_pred CCcEEEecCCCCCC--CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 111 PVDVLVVNQGVFVP--GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 111 ~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|++|||||...+ .++.+.+.+.+++.+++|+.+++.+++.++|.|++++.+ +|+++||..+..
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g---~iv~~sS~~~~~ 145 (255)
T PRK06057 79 SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKG---SIINTASFVAVM 145 (255)
T ss_pred CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCc---EEEEEcchhhcc
Confidence 89999999997643 356677889999999999999999999999999876544 899999976544
No 138
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.89 E-value=9.5e-22 Score=148.53 Aligned_cols=141 Identities=30% Similarity=0.449 Sum_probs=115.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChh-HHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCC
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGE-KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~ 111 (179)
+|+++||||+|+||++++++|+++|++|++++|+.+ ..++..+++.. .+.++.++.+|+++++++.+++++ +++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRA-LGVEVIFFPADVADLSAHEAMLDAAQAAWGR 80 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 589999999999999999999999999999998753 33444444432 245688899999999998887765 378
Q ss_pred CcEEEecCCCCCC--CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCC---CcEEEEecccCccc
Q 030328 112 VDVLVVNQGVFVP--GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGG---PASIALMSSQAGQV 178 (179)
Q Consensus 112 id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~---~~~iv~iss~~g~~ 178 (179)
+|++|||+|.... .++.+.++++++..+++|+.+++.+++.+.+.|.+++.+. ..+|+++||..+..
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~ 152 (256)
T PRK12745 81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM 152 (256)
T ss_pred CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc
Confidence 9999999997543 4567788999999999999999999999999998765432 45799999987653
No 139
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.89 E-value=1.1e-21 Score=148.55 Aligned_cols=140 Identities=19% Similarity=0.252 Sum_probs=114.7
Q ss_pred CcCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecC-----------hhHHHHHHHHHHhhcCceEEEEEeeCCCHH
Q 030328 34 PIKDRHVFITGGSS--GIGLALAHQAAKEGARVSILARS-----------GEKLEEAKQSIQLATGIEVATYSADVRDFD 100 (179)
Q Consensus 34 ~~~~k~vlItGa~~--~iG~~la~~l~~~g~~v~~~~r~-----------~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 100 (179)
++++|+++||||++ |||.+++++|+++|++|++++|+ .+......+++. ..+.++.++.+|+++.+
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~ 80 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIE-SYGVRCEHMEIDLSQPY 80 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHH-hcCCeEEEEECCCCCHH
Confidence 46789999999994 99999999999999999999987 222222333332 23567889999999999
Q ss_pred HHHHHHHh----hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 101 AVKTALDE----AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 101 ~v~~~~~~----~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
++++++++ ++++|++|||||.....++.+.++++++..+++|+.+++.+.+++.|.|.++..+ +|+++||..+
T Consensus 81 ~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~iv~~ss~~~ 157 (256)
T PRK12748 81 APNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGG---RIINLTSGQS 157 (256)
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCe---EEEEECCccc
Confidence 98877665 4789999999998766777788999999999999999999999999998765443 8999999876
Q ss_pred c
Q 030328 177 Q 177 (179)
Q Consensus 177 ~ 177 (179)
.
T Consensus 158 ~ 158 (256)
T PRK12748 158 L 158 (256)
T ss_pred c
Confidence 4
No 140
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.89 E-value=1.2e-21 Score=149.65 Aligned_cols=141 Identities=31% Similarity=0.388 Sum_probs=118.1
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhc-CceEEEEEeeCCCHHHHHHHHHh----
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
.+++|+++||||+|+||.+++++|+++|++|++++|++++.++..+++.... +.++..+.+|+++++++.+++++
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW 83 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999999999887776666554322 35678889999999998877665
Q ss_pred hCCCcEEEecCCCCCC-CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 109 AGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 109 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
.+++|++|||+|.... .++.+.+.++++.++++|+.+++.+++++.+.|.+++.+ +|+++||..+.
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g---~iv~~sS~~~~ 150 (276)
T PRK05875 84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGG---SFVGISSIAAS 150 (276)
T ss_pred cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc---EEEEEechhhc
Confidence 4789999999996542 466678899999999999999999999999999766543 89999998654
No 141
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.89 E-value=1.4e-21 Score=146.97 Aligned_cols=141 Identities=30% Similarity=0.382 Sum_probs=114.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCC
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~ 111 (179)
+|+++|||++++||++++++|+++|++|+++++ +++..++..+++.. .+.++..+.+|+++.+++++++++ +++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRR-QGGEALAVAADVADEADVLRLFEAVDRELGR 80 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHh-CCCcEEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 578999999999999999999999999988874 44444444444432 345677899999999998887764 478
Q ss_pred CcEEEecCCCCCC-CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 112 VDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 112 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+|++|||||.... .++.+.++++|+..+++|+.+++.+++.+++.|.++..+..++|+++||.++..
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 148 (248)
T PRK06123 81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARL 148 (248)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcC
Confidence 9999999998654 456778899999999999999999999999999765433345899999987654
No 142
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2e-21 Score=147.19 Aligned_cols=138 Identities=21% Similarity=0.265 Sum_probs=114.6
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC-hhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS-GEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
..+|+++||||+++||++++++|+++|++|++++++ .+..++..+++.. .+.++..+.+|++|.+++++++++ .
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRA-LGRRAVALQADLADEAEVRALVARASAAL 85 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 368899999999999999999999999999887764 4445555554432 255688899999999999887765 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
+++|++|||||.....++.+.+.+++++++++|+.+++.+++.+.+.|.+...+ ++++++|..+
T Consensus 86 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~iv~~~s~~~ 149 (258)
T PRK09134 86 GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARG---LVVNMIDQRV 149 (258)
T ss_pred CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc---eEEEECchhh
Confidence 789999999998777777788999999999999999999999999998765443 8999988644
No 143
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.89 E-value=1.2e-21 Score=147.00 Aligned_cols=138 Identities=28% Similarity=0.391 Sum_probs=115.0
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChh-HHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGE-KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
..++|+++||||+++||+++|++|+++|++++++.++.+ ..++..+++.. .+.++..+.+|+++.+++++++++
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEA-AGGRAIAVQADVADAAAVTRLFDAAETA 80 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999988877544 34444444433 356788899999999999887765
Q ss_pred hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 109 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
++++|++|||||.....++.+.+.+++++++++|+.+++.+++++.|.|.+. ++|+++||.++.
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~iv~~ss~~~~ 144 (245)
T PRK12937 81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-----GRIINLSTSVIA 144 (245)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-----cEEEEEeecccc
Confidence 5789999999998777777788899999999999999999999999988542 389999987654
No 144
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2.2e-21 Score=146.68 Aligned_cols=143 Identities=29% Similarity=0.456 Sum_probs=121.4
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
.+++|+++||||+|+||++++++|+++|++|++++|++++.++..+++... +.++..+.+|+++.+++++++++ .
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE-GGAAHVVSLDVTDYQSIKAAVAHAETEA 84 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 368999999999999999999999999999999999998877776665432 45678899999999998887654 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCC-----CCcEEEEecccCcc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNG-----GPASIALMSSQAGQ 177 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----~~~~iv~iss~~g~ 177 (179)
+++|++|||+|.....++.+.+.++|+.++++|+.+++.+++.+.|.|.++..+ ..++++++||..+.
T Consensus 85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 157 (258)
T PRK06949 85 GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGL 157 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECccccc
Confidence 789999999998776777778889999999999999999999999999876531 13589999998764
No 145
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2e-21 Score=148.61 Aligned_cols=140 Identities=30% Similarity=0.426 Sum_probs=118.5
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
...|+++||||+|+||++++++|+++|++|++++|+.+..++..+++.. .+.++..+.+|+++++++.+++++ .+
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRA-DGGEAVAFPLDVTDPDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4678999999999999999999999999999999988776655555433 245678889999999999888765 46
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|++|||||.....+..+.+++.+++.+++|+.+++.+++.++|.|.+++.+ +|+++||.++..
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g---~iv~isS~~~~~ 151 (274)
T PRK07775 87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRG---DLIFVGSDVALR 151 (274)
T ss_pred CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc---eEEEECChHhcC
Confidence 89999999998766667778899999999999999999999999999776543 899999986643
No 146
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.89 E-value=2.5e-21 Score=145.68 Aligned_cols=141 Identities=30% Similarity=0.398 Sum_probs=115.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCC
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILA-RSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~ 111 (179)
.|+++||||+++||.+++++|+++|++|++++ |+++..++..+++.. .+.++..+.+|+++.+++++++++ +++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRA-AGGRACVVAGDVANEADVIAMFDAVQSAFGR 80 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 47899999999999999999999999998765 555555555555533 355788999999999998887764 468
Q ss_pred CcEEEecCCCCCC-CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 112 VDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 112 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+|++|||||.... .++.+.++++++..+++|+.+++.+++.+++.|..++.+..++||++||.++..
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~ 148 (248)
T PRK06947 81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRL 148 (248)
T ss_pred CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcC
Confidence 9999999997654 456678899999999999999999999999998766543345899999987654
No 147
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.89 E-value=8e-22 Score=149.92 Aligned_cols=132 Identities=30% Similarity=0.388 Sum_probs=111.2
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
.+++|+++||||++|||++++++|+++|++|++++++++..+ ..++..+.+|+++++++++++++ +
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----------HENYQFVPTDVSSAEEVNHTVAEIIEKF 75 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----------cCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 468999999999999999999999999999999999875432 23567789999999999887765 4
Q ss_pred CCCcEEEecCCCCCCC---------CcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPG---------ELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||||..... +..+.+.++|++.+++|+.+++.+++++.|.|.+++.+ +||++||.++..
T Consensus 76 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g---~iv~isS~~~~~ 150 (266)
T PRK06171 76 GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDG---VIVNMSSEAGLE 150 (266)
T ss_pred CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCc---EEEEEccccccC
Confidence 7899999999975432 23457899999999999999999999999999876544 899999988754
No 148
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2.4e-21 Score=144.79 Aligned_cols=137 Identities=42% Similarity=0.556 Sum_probs=117.2
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
+.+++++||||+|++|++++++|+++|++|++++|++++.++..+++... .++..+.+|+++.+++.+.+++ ++
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK--GNVLGLAADVRDEADVQRAVDAIVAAFG 81 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999999988777666665432 5678899999999998887764 46
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
++|++||++|....+++.+.+.+++++++++|+.+++.+++++++.|.+ +. +++|++||.++.
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~---~~iv~~ss~~~~ 144 (237)
T PRK07326 82 GLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR-GG---GYIINISSLAGT 144 (237)
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH-CC---eEEEEECChhhc
Confidence 8999999999877777778899999999999999999999999999833 22 389999998654
No 149
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.89 E-value=3e-22 Score=143.41 Aligned_cols=134 Identities=31% Similarity=0.375 Sum_probs=113.2
Q ss_pred CCcEEEEEcCC-CchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh-----h
Q 030328 36 KDRHVFITGGS-SGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-----A 109 (179)
Q Consensus 36 ~~k~vlItGa~-~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~-----~ 109 (179)
..|.++|||++ ||||.+++++|.++|+.|+.+.|+.+.-.....+ ........|+++++++.++..+ .
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~------~gl~~~kLDV~~~~~V~~v~~evr~~~~ 79 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ------FGLKPYKLDVSKPEEVVTVSGEVRANPD 79 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh------hCCeeEEeccCChHHHHHHHHHHhhCCC
Confidence 46788999776 8999999999999999999999988765544332 2367789999999998776543 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcccC
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQVG 179 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~g 179 (179)
|.+|+|+||||.....|..+.+.++.+++|++|+.|.+++++++...+.+. +| .|||++|.++..+
T Consensus 80 Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika-KG---tIVnvgSl~~~vp 145 (289)
T KOG1209|consen 80 GKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA-KG---TIVNVGSLAGVVP 145 (289)
T ss_pred CceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc-cc---eEEEecceeEEec
Confidence 899999999999998899999999999999999999999999999666554 44 9999999988653
No 150
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.89 E-value=2.9e-21 Score=145.35 Aligned_cols=142 Identities=31% Similarity=0.441 Sum_probs=117.1
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCC--CHHHHHHHHH----
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVR--DFDAVKTALD---- 107 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~--~~~~v~~~~~---- 107 (179)
.+++|+++|||++++||.+++++|+++|++|++++|+.+..++..+++....+.++.++.+|++ +.++++++++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999888777767665443445667777875 6677666544
Q ss_pred hhCCCcEEEecCCCCCC-CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 108 EAGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 108 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
.++++|++|||||.... .++.+.+.+.+++.+++|+.+++.+++++.|.|.+.+.+ +|+++||..+..
T Consensus 89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~---~iv~~ss~~~~~ 157 (247)
T PRK08945 89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAA---SLVFTSSSVGRQ 157 (247)
T ss_pred HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCC---EEEEEccHhhcC
Confidence 35789999999997543 456677889999999999999999999999999876543 899999987654
No 151
>PRK08264 short chain dehydrogenase; Validated
Probab=99.89 E-value=2.1e-21 Score=145.27 Aligned_cols=134 Identities=31% Similarity=0.401 Sum_probs=116.6
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~i 112 (179)
.+.+|+++||||+|++|+++|++|+++|+ +|++++|++++.++ .+.++..+.+|+++.++++++++..+++
T Consensus 3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~~~i 74 (238)
T PRK08264 3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------LGPRVVPLQLDVTDPASVAAAAEAASDV 74 (238)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--------cCCceEEEEecCCCHHHHHHHHHhcCCC
Confidence 46789999999999999999999999999 99999998765443 2456888999999999999999988889
Q ss_pred cEEEecCCC-CCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 113 DVLVVNQGV-FVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 113 d~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
|++||++|. ....++.+.+.++++..+++|+.+++.+++++.|.+++.+.+ +++++||..+..
T Consensus 75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~v~~sS~~~~~ 138 (238)
T PRK08264 75 TILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGG---AIVNVLSVLSWV 138 (238)
T ss_pred CEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC---EEEEEcChhhcc
Confidence 999999998 455667788999999999999999999999999998876543 899999976643
No 152
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.89 E-value=9.2e-23 Score=157.50 Aligned_cols=141 Identities=18% Similarity=0.216 Sum_probs=99.6
Q ss_pred CcCcCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHH---------hhcCc-------------
Q 030328 32 RIPIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQ---------LATGI------------- 87 (179)
Q Consensus 32 ~~~~~~k~vlItGa~--~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~---------~~~~~------------- 87 (179)
...+++|+++|||++ +|||+++|+.|+++|++|++.++.+. +....+... ...+.
T Consensus 3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 81 (299)
T PRK06300 3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPI-YKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDAS 81 (299)
T ss_pred CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccch-hhhhhhhcccccccccccccccchhhhhhHHHhhhh
Confidence 456789999999996 99999999999999999999876420 110000000 00000
Q ss_pred --eEEEEEeeCCC--------HHHHHHH----HHhhCCCcEEEecCCCCC--CCCcccCCHHHHHHHHHhhhhHHHHHHH
Q 030328 88 --EVATYSADVRD--------FDAVKTA----LDEAGPVDVLVVNQGVFV--PGELEVQSLDEVRLMIDVNIIGSFHMIK 151 (179)
Q Consensus 88 --~v~~~~~D~~~--------~~~v~~~----~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 151 (179)
....+.+|+.+ .++++++ .++++++|++|||||... ..++.+.+.++|++.+++|+.|++++++
T Consensus 82 ~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~ 161 (299)
T PRK06300 82 FDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLS 161 (299)
T ss_pred cCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 11112222222 1234444 445689999999998653 4678889999999999999999999999
Q ss_pred HHcHHHHhccCCCCcEEEEecccCccc
Q 030328 152 AALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 152 ~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|.|+++ | +|+++||.++..
T Consensus 162 a~~p~m~~~--G---~ii~iss~~~~~ 183 (299)
T PRK06300 162 HFGPIMNPG--G---STISLTYLASMR 183 (299)
T ss_pred HHHHHhhcC--C---eEEEEeehhhcC
Confidence 999999642 3 899999987754
No 153
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.89 E-value=3.3e-21 Score=145.96 Aligned_cols=140 Identities=25% Similarity=0.421 Sum_probs=119.5
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
+++|+++||||+++||++++++|+++|++ |++++|++++.+...+++. ..+.++.++.+|+++++++.++++. +
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELE-ALGAKAVFVQADLSDVEDCRRVVAAADEAF 82 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 57899999999999999999999999999 9999999877666555553 2356788899999999998887765 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
+++|++||++|....+++.+.+++.++.++++|+.+++.++++++|.|.+++. .++++++||..+.
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~g~iv~~ss~~~~ 148 (260)
T PRK06198 83 GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKA--EGTIVNIGSMSAH 148 (260)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CCEEEEECCcccc
Confidence 78999999999877777777899999999999999999999999999976542 2489999998764
No 154
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.89 E-value=2.4e-21 Score=146.00 Aligned_cols=132 Identities=28% Similarity=0.473 Sum_probs=114.1
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
+.+++|+++||||+++||++++++|+++|++|++++|+. . ...+.++..+.+|+++.+++++++++
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 73 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------L-TQEDYPFATFVLDVSDAAAVAQVCQRLLAE 73 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------h-hhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999986 1 11245678899999999999887765
Q ss_pred hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 109 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
.+++|++|||+|.....++.+.+.++++..+++|+.+++.+++++.|.|++++.+ +|+++||..+.
T Consensus 74 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g---~iv~~ss~~~~ 139 (252)
T PRK08220 74 TGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSG---AIVTVGSNAAH 139 (252)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC---EEEEECCchhc
Confidence 4789999999998777778888999999999999999999999999999876543 89999997654
No 155
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.88 E-value=3.3e-21 Score=145.22 Aligned_cols=134 Identities=30% Similarity=0.419 Sum_probs=113.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCCCc
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVD 113 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~id 113 (179)
++++||||+|+||.+++++|+++|++|++++|+++..++..+++ +.++..+.+|+++.+++++++++ ++++|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id 76 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----GDNLYIAQLDVRNRAAIEEMLASLPAEWRNID 76 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----ccceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999999999999999999987766554433 34678899999999998887664 46899
Q ss_pred EEEecCCCCC-CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 114 VLVVNQGVFV-PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 114 ~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|||||... ..+..+.+.+++++.+++|+.+++.+++.+.|.|.+++.+ +|+++||.++..
T Consensus 77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~iv~isS~~~~~ 139 (248)
T PRK10538 77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHG---HIINIGSTAGSW 139 (248)
T ss_pred EEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc---EEEEECCcccCC
Confidence 9999999754 3456678899999999999999999999999999876543 899999987653
No 156
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.88 E-value=2.5e-21 Score=146.36 Aligned_cols=136 Identities=23% Similarity=0.354 Sum_probs=116.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEE
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li 116 (179)
+|+++||||+|+||++++++|+++|++|++++|+++..++..+... ..+.++..+.+|+++++++.+.++ +++|++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~--~~id~vi 78 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAA-RRGLALRVEKLDLTDAIDRAQAAE--WDVDVLL 78 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-hcCCcceEEEeeCCCHHHHHHHhc--CCCCEEE
Confidence 5789999999999999999999999999999999876665554433 234567888999999999887765 3799999
Q ss_pred ecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 117 VNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 117 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
||||.....++.+.+.++++..+++|+.+++.+++.++|.+.+.+.+ +||++||..+..
T Consensus 79 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---~iv~~SS~~~~~ 137 (257)
T PRK09291 79 NNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKG---KVVFTSSMAGLI 137 (257)
T ss_pred ECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc---eEEEEcChhhcc
Confidence 99998887788888999999999999999999999999999776543 999999987653
No 157
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.88 E-value=2.6e-21 Score=146.08 Aligned_cols=137 Identities=28% Similarity=0.462 Sum_probs=114.4
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh----
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSIL-ARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA---- 109 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~---- 109 (179)
+++++++||||+|+||+++|++|+++|++|++. .|+.++.++..+++.. .+.++..+.+|++|.+++.+++++.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIES-NGGKAFLIEADLNSIDGVKKLVEQLKNEL 82 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-cCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence 568999999999999999999999999998775 6777666655555532 2456788999999999998877653
Q ss_pred ------CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 110 ------GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 110 ------~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
+++|++|||||.....++.+.+.+.|+..+++|+.+++++++.+.|.|.+. ++++++||..+.
T Consensus 83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~v~~sS~~~~ 151 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE-----GRVINISSAEVR 151 (254)
T ss_pred ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC-----CEEEEECCHHhc
Confidence 469999999998777777788999999999999999999999999988543 289999998664
No 158
>PRK12742 oxidoreductase; Provisional
Probab=99.88 E-value=2.4e-21 Score=144.73 Aligned_cols=131 Identities=27% Similarity=0.446 Sum_probs=109.3
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC-hhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS-GEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
+++|+++||||+|+||++++++|+++|++|++++++ ++..++..++. + +..+.+|+++.+++.+.+++.+++|
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~----~--~~~~~~D~~~~~~~~~~~~~~~~id 77 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET----G--ATAVQTDSADRDAVIDVVRKSGALD 77 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh----C--CeEEecCCCCHHHHHHHHHHhCCCc
Confidence 578999999999999999999999999999888764 44444332222 2 3567899999999999888888899
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
++|||||.....+..+.++++|+..+++|+.+++.+++.+.|.|.+. +++|++||..+
T Consensus 78 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----g~iv~isS~~~ 135 (237)
T PRK12742 78 ILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-----GRIIIIGSVNG 135 (237)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-----CeEEEEecccc
Confidence 99999998766666778899999999999999999999999988532 28999999876
No 159
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.88 E-value=3.6e-21 Score=144.29 Aligned_cols=138 Identities=27% Similarity=0.330 Sum_probs=113.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhH-HHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCC
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEK-LEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGP 111 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~ 111 (179)
.|+++|||++++||+++|++|+++|++|++++|++++ .++..+... ..+.++.++.+|+++.+++++++++ .++
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 80 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYG-FTEDQVRLKELDVTDTEECAEALAEIEEEEGP 80 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhh-ccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3689999999999999999999999999999998542 222222221 2245688899999999998887655 478
Q ss_pred CcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 112 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+|++|||+|.....++.+.+.++|+.++++|+.+++.+++.++|.|++.+. ++||++||..+..
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~~iv~iss~~~~~ 144 (245)
T PRK12824 81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGY---GRIINISSVNGLK 144 (245)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCC---eEEEEECChhhcc
Confidence 999999999887777778899999999999999999999999999987654 3999999987653
No 160
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.88 E-value=3.6e-21 Score=144.37 Aligned_cols=141 Identities=32% Similarity=0.428 Sum_probs=119.4
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSIL-ARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
++++|+++||||+|+||++++++|+++|++|+++ +|+++..++..+++.. .+.++..+.+|++++++++++++.
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKE-EGGDAIAVKADVSSEEDVENLVEQIVEK 80 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999998 8988776666665543 355688899999999998887654
Q ss_pred hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
.+++|++||++|.....++.+.+.+++++.+++|+.+++.+++.+.|.+.+++. ++++++||..+..
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~~~v~~sS~~~~~ 147 (247)
T PRK05565 81 FGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKS---GVIVNISSIWGLI 147 (247)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC---cEEEEECCHhhcc
Confidence 468999999999876666777889999999999999999999999999977654 3899999976543
No 161
>PRK07069 short chain dehydrogenase; Validated
Probab=99.88 E-value=2.7e-21 Score=145.55 Aligned_cols=136 Identities=33% Similarity=0.394 Sum_probs=114.3
Q ss_pred EEEEcCCCchHHHHHHHHHHcCCeEEEEecC-hhHHHHHHHHHHhhcC-ceEEEEEeeCCCHHHHHHHHHh----hCCCc
Q 030328 40 VFITGGSSGIGLALAHQAAKEGARVSILARS-GEKLEEAKQSIQLATG-IEVATYSADVRDFDAVKTALDE----AGPVD 113 (179)
Q Consensus 40 vlItGa~~~iG~~la~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~v~~~~~~----~~~id 113 (179)
++||||+++||++++++|+++|++|++++|+ .+..++..+++....+ ..+..+.+|+++.+++++++++ ++++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 7999999999999999999999999999998 6666666555543322 2355678999999998877654 57899
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|||||.....++.+.+.+++++.+++|+.+++.+++.++|.|++++.+ +|+++||.++..
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---~ii~~ss~~~~~ 143 (251)
T PRK07069 82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPA---SIVNISSVAAFK 143 (251)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCc---EEEEecChhhcc
Confidence 99999998877778888999999999999999999999999999876543 999999987653
No 162
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.88 E-value=3.3e-21 Score=163.26 Aligned_cols=144 Identities=28% Similarity=0.397 Sum_probs=122.4
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcC-ceEEEEEeeCCCHHHHHHHHHh---
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATG-IEVATYSADVRDFDAVKTALDE--- 108 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~v~~~~~~--- 108 (179)
.++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++....+ ..+..+.+|+++.+++++++++
T Consensus 410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~ 489 (676)
T TIGR02632 410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL 489 (676)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 346899999999999999999999999999999999998887776666653322 3567789999999999887764
Q ss_pred -hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 -~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||.....++.+.+.++|+..+++|+.+++.+++.++|.|++++. .++||++||..+..
T Consensus 490 ~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~--~g~IV~iSS~~a~~ 558 (676)
T TIGR02632 490 AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGL--GGNIVFIASKNAVY 558 (676)
T ss_pred hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CCEEEEEeChhhcC
Confidence 578999999999877777888899999999999999999999999999987542 24899999987654
No 163
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.88 E-value=2.6e-21 Score=145.17 Aligned_cols=131 Identities=25% Similarity=0.305 Sum_probs=108.8
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh-CCCcEEE
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-GPVDVLV 116 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~-~~id~li 116 (179)
++++||||+||||++++++|+++|++|++++|+++..++..+. ..++..+.+|+++.+++++++++. ..+|.+|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i 76 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ-----SANIFTLAFDVTDHPGTKAALSQLPFIPELWI 76 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh-----cCCCeEEEeeCCCHHHHHHHHHhcccCCCEEE
Confidence 7899999999999999999999999999999998766544332 235778899999999999998875 3479999
Q ss_pred ecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 117 VNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 117 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
||||.....+..+.++++|++++++|+.+++++++.+.|.|.+. ++++++||..+..
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~iv~isS~~~~~ 133 (240)
T PRK06101 77 FNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCG-----HRVVIVGSIASEL 133 (240)
T ss_pred EcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CeEEEEechhhcc
Confidence 99986543344457889999999999999999999999998532 2899999987654
No 164
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.88 E-value=5e-21 Score=143.95 Aligned_cols=139 Identities=32% Similarity=0.495 Sum_probs=119.7
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
+++|+++||||+|++|++++++|+++|++|++++|+.++.++..+++.. .+.++..+.+|+++.+++++++++ ++
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEA-AGGKARARQVDVRDRAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 4689999999999999999999999999999999998776666665543 345688899999999999888765 46
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
++|++||++|.....++.+.+.++++..++.|+.+++.+.+.+.|.|.+++. .+++++||..+.
T Consensus 83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~~ii~~ss~~~~ 146 (251)
T PRK12826 83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGG---GRIVLTSSVAGP 146 (251)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC---cEEEEEechHhh
Confidence 8999999999887777778899999999999999999999999999977653 389999998764
No 165
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.88 E-value=3.8e-21 Score=144.29 Aligned_cols=138 Identities=29% Similarity=0.307 Sum_probs=116.5
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCC
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~i 112 (179)
+++++|+++|||++++||+++++.|+++|++|++++|+++..++..++. ....+.+|+++.+++++.++..+++
T Consensus 5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~~~ 78 (245)
T PRK07060 5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET------GCEPLRLDVGDDAAIRAALAAAGAF 78 (245)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCeEEEecCCCHHHHHHHHHHhCCC
Confidence 4568899999999999999999999999999999999987665443322 2456789999999999999888889
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
|++|||+|.....+..+.+.+++++.+++|+.+++.+++.+.+.+.+++. .++|+++||..+..
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~~iv~~sS~~~~~ 142 (245)
T PRK07060 79 DGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGR--GGSIVNVSSQAALV 142 (245)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--CcEEEEEccHHHcC
Confidence 99999999877666667888999999999999999999999999875432 24899999986643
No 166
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.88 E-value=5.7e-21 Score=142.98 Aligned_cols=137 Identities=30% Similarity=0.463 Sum_probs=114.7
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCCC
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~i 112 (179)
|+++||||+++||++++++|+++|++|+++.| +++..++..++... .+.++..+.+|++++++++++++. .+++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGA-LGFDFRVVEGDVSSFESCKAAVAKVEAELGPI 79 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-hCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999999888 55555544444432 245688899999999998887654 4789
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
|++|||+|...+.++.+.+.+++++.+++|+.+++.+++.+.|.|++.+.+ +|+++||..+..
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---~iv~iss~~~~~ 142 (242)
T TIGR01829 80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWG---RIINISSVNGQK 142 (242)
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc---EEEEEcchhhcC
Confidence 999999998777777788999999999999999999999999999876543 899999987654
No 167
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.88 E-value=5.4e-21 Score=145.07 Aligned_cols=137 Identities=32% Similarity=0.456 Sum_probs=117.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCCC
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~i 112 (179)
+++++||||+|+||++++++|+++|++|++++|++++.++..+++... +.++..+.+|+++.+++++++++ ++++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 79 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH-GGEALVVPTDVSDAEACERLIEAAVARFGGI 79 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999999999999988777666655432 45788899999999998887764 4689
Q ss_pred cEEEecCCCCCCCCcccC-CHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 113 DVLVVNQGVFVPGELEVQ-SLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
|++|||+|.....++.+. +++++++.+++|+.+++.+++.+.|.|.++. ++++++||..+..
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~----~~iv~~sS~~~~~ 142 (263)
T PRK06181 80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASR----GQIVVVSSLAGLT 142 (263)
T ss_pred CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CEEEEEecccccC
Confidence 999999998777777777 8999999999999999999999999987543 3899999987643
No 168
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.88 E-value=3.8e-21 Score=145.57 Aligned_cols=139 Identities=22% Similarity=0.285 Sum_probs=111.9
Q ss_pred EEEEEcCCCchHHHHHHHHHH----cCCeEEEEecChhHHHHHHHHHHhh-cCceEEEEEeeCCCHHHHHHHHHhh----
Q 030328 39 HVFITGGSSGIGLALAHQAAK----EGARVSILARSGEKLEEAKQSIQLA-TGIEVATYSADVRDFDAVKTALDEA---- 109 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~----~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~v~~~~~~~---- 109 (179)
+++||||++|||+++|++|++ +|++|++++|+++..++..+++... .+.++..+.+|+++.+++++++++.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 689999999999999999997 7999999999998888877777542 3557888999999999998877653
Q ss_pred CC----CcEEEecCCCCCCC--CcccC-CHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GP----VDVLVVNQGVFVPG--ELEVQ-SLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~----id~li~~ag~~~~~--~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++ .|++|||||..... ...+. +.++|++.+++|+.+++.+++.++|.|.+.. +..++|+++||.++..
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~-~~~~~iv~isS~~~~~ 156 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSP-GLNRTVVNISSLCAIQ 156 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcC-CCCCEEEEECCHHhCC
Confidence 22 26999999975432 23323 5789999999999999999999999997652 2234899999987754
No 169
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.88 E-value=2e-21 Score=145.03 Aligned_cols=130 Identities=29% Similarity=0.360 Sum_probs=110.3
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
++++|+++|||++++||++++++|+++|++|++++|++... ...++..+.+|++++ ++++++..+++|
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------~~~~~~~~~~D~~~~--~~~~~~~~~~id 69 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD----------LSGNFHFLQLDLSDD--LEPLFDWVPSVD 69 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc----------cCCcEEEEECChHHH--HHHHHHhhCCCC
Confidence 36789999999999999999999999999999999975421 123577889999887 777788888999
Q ss_pred EEEecCCCCC-CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 114 VLVVNQGVFV-PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 114 ~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|||||... ..++.+.+.+++++.+++|+.+++.++++++|.|++++.+ +|+++||.++..
T Consensus 70 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~iv~~sS~~~~~ 132 (235)
T PRK06550 70 ILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSG---IIINMCSIASFV 132 (235)
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc---EEEEEcChhhcc
Confidence 9999999754 3566778899999999999999999999999999876544 899999987654
No 170
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.88 E-value=5.6e-21 Score=143.03 Aligned_cols=136 Identities=29% Similarity=0.447 Sum_probs=110.4
Q ss_pred EEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-hHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCCCcE
Q 030328 40 VFITGGSSGIGLALAHQAAKEGARVSILARSG-EKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVDV 114 (179)
Q Consensus 40 vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~id~ 114 (179)
++||||+++||+++|++|+++|++|++++|+. +..++..+++.. .+.++..+.+|+++.+++++++++ ++++|+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~ 79 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQA-QGGNARLLQFDVADRVACRTLLEADIAEHGAYYG 79 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH-cCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 58999999999999999999999999988754 445555555433 255788899999999998877654 578999
Q ss_pred EEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHc-HHHHhccCCCCcEEEEecccCcccC
Q 030328 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAAL-PLIKKRQNGGPASIALMSSQAGQVG 179 (179)
Q Consensus 115 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~~~~~~iv~iss~~g~~g 179 (179)
+|||+|.....++.+.+.++|+.++++|+.++++++++++ |.+++++. ++|+++||.++..|
T Consensus 80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~iv~vsS~~~~~~ 142 (239)
T TIGR01831 80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQG---GRIITLASVSGVMG 142 (239)
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCC---eEEEEEcchhhccC
Confidence 9999998877777788999999999999999999999876 44444443 38999999876543
No 171
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.88 E-value=9.8e-21 Score=142.11 Aligned_cols=140 Identities=25% Similarity=0.358 Sum_probs=115.9
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCCC
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSIL-ARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~i 112 (179)
|+++||||+|+||++++++|+++|++|+++ .|+++..++...++.. .+.++..+.+|++|++++++++++ .+++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i 80 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQ-AGGKAFVLQADISDENQVVAMFTAIDQHDEPL 80 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh-CCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 689999999999999999999999999774 5666666655555543 355688899999999999888765 4789
Q ss_pred cEEEecCCCC-CCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 113 DVLVVNQGVF-VPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 113 d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
|++|||+|.. ...+..+.+.++++..+++|+.+++.+++.+++.|.++..+..++||++||.++..
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~ 147 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRL 147 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcc
Confidence 9999999975 34556778899999999999999999999999999877554456899999987654
No 172
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.88 E-value=5.7e-21 Score=161.82 Aligned_cols=141 Identities=34% Similarity=0.496 Sum_probs=119.3
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
.+++|+++||||++|||++++++|+++|++|++++|+++..++..+++.. .+.++..+.+|++|.+++++++++ +
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 446 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRA-KGGTAHAYTCDLTDSAAVDHTVKDILAEH 446 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 56799999999999999999999999999999999999888877776643 356788899999999998887764 5
Q ss_pred CCCcEEEecCCCCCCCCcccC--CHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQ--SLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||||......+.+. +.++++.++++|+.+++.+++.++|.|++++.+ +||++||.++..
T Consensus 447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g---~iv~isS~~~~~ 514 (657)
T PRK07201 447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFG---HVVNVSSIGVQT 514 (657)
T ss_pred CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC---EEEEECChhhcC
Confidence 789999999997654443322 357899999999999999999999999877544 999999987653
No 173
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.88 E-value=8e-21 Score=141.76 Aligned_cols=139 Identities=29% Similarity=0.375 Sum_probs=116.4
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
+.+++|+++||||+|+||++++++|+++|++|++++|+++..++..+++.. ..+..+.+|++|.+++++++++
T Consensus 3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (239)
T PRK12828 3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA---DALRIGGIDLVDPQAARRAVDEVNRQ 79 (239)
T ss_pred CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh---cCceEEEeecCCHHHHHHHHHHHHHH
Confidence 346799999999999999999999999999999999988766555554432 2356678999999998887764
Q ss_pred hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 109 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
++++|++||++|.....++.+.+++++++.+++|+.+++.+++++.|.|.+++. ++++++||..+.
T Consensus 80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~---~~iv~~sS~~~~ 145 (239)
T PRK12828 80 FGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGG---GRIVNIGAGAAL 145 (239)
T ss_pred hCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCC---CEEEEECchHhc
Confidence 578999999999876666677789999999999999999999999999987654 399999997654
No 174
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.88 E-value=4.4e-21 Score=146.10 Aligned_cols=141 Identities=21% Similarity=0.237 Sum_probs=107.2
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC-hhHHHHHHHHHHhhcCceEEEEEeeCCCHHHH----HHHH----Hh
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARS-GEKLEEAKQSIQLATGIEVATYSADVRDFDAV----KTAL----DE 108 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v----~~~~----~~ 108 (179)
++++||||++|||++++++|+++|++|++++|+ ++..++..+++....+.++..+.+|++|.+++ ++++ +.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 689999999999999999999999999988754 55666666666433345667789999998754 3333 33
Q ss_pred hCCCcEEEecCCCCCCCCcccCCH-----------HHHHHHHHhhhhHHHHHHHHHcHHHHhcc---CCCCcEEEEeccc
Q 030328 109 AGPVDVLVVNQGVFVPGELEVQSL-----------DEVRLMIDVNIIGSFHMIKAALPLIKKRQ---NGGPASIALMSSQ 174 (179)
Q Consensus 109 ~~~id~li~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~~~~iv~iss~ 174 (179)
++++|+||||||...+.++.+.+. ++|.+++++|+.+++.+++.+.|.|.... .+....|++++|.
T Consensus 82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~ 161 (267)
T TIGR02685 82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA 161 (267)
T ss_pred cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence 578999999999766555443333 35889999999999999999999986542 1223589999988
Q ss_pred Cccc
Q 030328 175 AGQV 178 (179)
Q Consensus 175 ~g~~ 178 (179)
.+..
T Consensus 162 ~~~~ 165 (267)
T TIGR02685 162 MTDQ 165 (267)
T ss_pred hccC
Confidence 7643
No 175
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.87 E-value=1.2e-20 Score=142.23 Aligned_cols=135 Identities=26% Similarity=0.389 Sum_probs=109.3
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
+++|+++||||+++||+++|++|+++|++|+++++ +++..++...++ +.++..+.+|+++++++++++++ +
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL----GDRAIALQADVTDREQVQAMFATATEHF 78 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 57899999999999999999999999999988765 444444333322 35678889999999998887765 3
Q ss_pred CC-CcEEEecCCCCC------CCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 110 GP-VDVLVVNQGVFV------PGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 110 ~~-id~li~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
++ +|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|.+.+.+ +|+++||..+
T Consensus 79 g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g---~iv~iss~~~ 149 (253)
T PRK08642 79 GKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFG---RIINIGTNLF 149 (253)
T ss_pred CCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCe---EEEEECCccc
Confidence 55 999999998632 2356778899999999999999999999999999765543 9999998754
No 176
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.87 E-value=1.3e-20 Score=141.14 Aligned_cols=140 Identities=32% Similarity=0.473 Sum_probs=119.1
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
.+.+|+++||||+|++|++++++|+++|++|++++|++++.+....++.. .+.++.++.+|+++++++.+++++ .
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRA-AGGEARVLVFDVSDEAAVRALIEAAVEAF 80 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 35678999999999999999999999999999999998877666655543 356688889999999998887765 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
+++|++||++|.....+..+.+.++++..++.|+.+++.+++++.|.|.+.+. .+|+++||..+.
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~---~~ii~~ss~~~~ 145 (246)
T PRK05653 81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARY---GRIVNISSVSGV 145 (246)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC---cEEEEECcHHhc
Confidence 78999999999877767777889999999999999999999999999876553 399999997654
No 177
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.87 E-value=1.2e-20 Score=142.63 Aligned_cols=134 Identities=28% Similarity=0.395 Sum_probs=115.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCCC
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~i 112 (179)
+|+++||||+|+||++++++|+++|++|++++|+.+..++..+++ .+.++..+.+|+++.+++.+.+++ .+++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADAL---GDARFVPVACDLTDAASLAAALANAAAERGPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 689999999999999999999999999999999988776665554 245678899999999998776654 4679
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
|++||++|.....++.+.++++|...+++|+.+++.+.+++.+.+.+++.+ +|+++||..+
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---~iv~~sS~~~ 139 (257)
T PRK07074 79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRG---AVVNIGSVNG 139 (257)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe---EEEEEcchhh
Confidence 999999998776677778899999999999999999999999999776543 8999999754
No 178
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.87 E-value=1.1e-20 Score=141.89 Aligned_cols=140 Identities=36% Similarity=0.547 Sum_probs=113.5
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC----hhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh--
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS----GEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-- 108 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~----~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~-- 108 (179)
+++|+++||||+|+||+++|++|+++|++|++++|. ++..++..+++.. .+.++.++.+|+++.++++++++.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 82 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEA-AGGKALGLAFDVRDFAATRAALDAGV 82 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 568999999999999999999999999999987764 3333333333322 355788899999999998887754
Q ss_pred --hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHc-HHHHhccCCCCcEEEEecccCccc
Q 030328 109 --AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAAL-PLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 --~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
.+++|++|||+|.....++.+.+.++|+..+++|+.+++.+++++. |.|++.+. .+++++||..+..
T Consensus 83 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~iv~~sS~~~~~ 152 (249)
T PRK12827 83 EEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRG---GRIVNIASVAGVR 152 (249)
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCC---eEEEEECCchhcC
Confidence 4689999999998887788888999999999999999999999999 55554433 4899999987653
No 179
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.87 E-value=8.9e-21 Score=145.14 Aligned_cols=127 Identities=28% Similarity=0.417 Sum_probs=105.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh---hCCCc
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---AGPVD 113 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---~~~id 113 (179)
+|+++|||| ||||+++|++|+ +|++|++++|+++..++..+++.. .+.++..+.+|++|.++++++++. ++++|
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLRE-AGFDVSTQEVDVSSRESVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence 689999998 699999999996 899999999998877766666643 356788899999999999888765 47899
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++|||||... ..++|++++++|+.+++.+++.+.|.|.++ + +++++||.++..
T Consensus 79 ~li~nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g---~iv~isS~~~~~ 131 (275)
T PRK06940 79 GLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAPG--G---AGVVIASQSGHR 131 (275)
T ss_pred EEEECCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhhC--C---CEEEEEeccccc
Confidence 9999999642 236789999999999999999999999643 2 678889887653
No 180
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.87 E-value=2.1e-20 Score=140.16 Aligned_cols=140 Identities=34% Similarity=0.438 Sum_probs=115.8
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhH-HHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEK-LEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
+.+|+++|||++|++|++++++|+++|++|+++.|+.++ .+...+++. ..+.++..+.+|+++.+++.+++++ +
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIG-ALGGKALAVQGDVSDAESVERAVDEAKAEF 81 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHH-hcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999999999999888876553 444444443 2356788889999999998887765 3
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++||++|.....+..+.+.+.+++.+++|+.+++.+.+++.|.+.+.+.+ +++++||.++..
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~v~iss~~~~~ 147 (248)
T PRK05557 82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSG---RIINISSVVGLM 147 (248)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCe---EEEEEcccccCc
Confidence 689999999998777777778899999999999999999999999998765433 899999986543
No 181
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.87 E-value=1.5e-20 Score=142.38 Aligned_cols=136 Identities=24% Similarity=0.364 Sum_probs=108.0
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh----hHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh-
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG----EKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE- 108 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~----~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~- 108 (179)
.+++|+++||||+++||.++|++|+++|++|++++++. +..++..+++.. .+.++..+++|+++++++++++++
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 83 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKA-AGAKAVAFQADLTTAAAVEKLFDDA 83 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHH-hCCcEEEEecCcCCHHHHHHHHHHH
Confidence 35789999999999999999999999999977766543 233334444432 245688899999999999887765
Q ss_pred ---hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEe-cccC
Q 030328 109 ---AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALM-SSQA 175 (179)
Q Consensus 109 ---~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~i-ss~~ 175 (179)
++++|++|||||.....++.+.+.+++++++++|+.+++.+++.+.|.|++. + +++++ ||..
T Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~---~iv~~~ss~~ 149 (257)
T PRK12744 84 KAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN--G---KIVTLVTSLL 149 (257)
T ss_pred HHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC--C---CEEEEecchh
Confidence 4789999999998776777788999999999999999999999999998643 2 45554 5543
No 182
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.87 E-value=2e-20 Score=141.02 Aligned_cols=137 Identities=30% Similarity=0.390 Sum_probs=116.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCCC
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPV 112 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~i 112 (179)
+|++|||||+|++|++++++|+++|++|++++|+++..++..+++.. .+.++..+.+|+++.++++++++. .+++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 79 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATD-AGGSVIYLVADVTKEDEIADMIAAAAAEFGGL 79 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 47899999999999999999999999999999998877766665543 245688899999999998877654 4679
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
|++||++|.....+..+.++++++..++.|+.+++.++++++|.|++.+. .+++++||.++.
T Consensus 80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~---~~~v~~ss~~~~ 141 (255)
T TIGR01963 80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGW---GRIINIASAHGL 141 (255)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC---eEEEEEcchhhc
Confidence 99999999877767777889999999999999999999999999977654 389999987654
No 183
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.87 E-value=7.7e-21 Score=141.32 Aligned_cols=125 Identities=18% Similarity=0.267 Sum_probs=103.1
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh-CCCcEEEe
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-GPVDVLVV 117 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~-~~id~li~ 117 (179)
+++||||++|||++++++|+++|++|++++|+++++++..+++ .+..+.+|+++++++++++++. +++|++||
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~ 75 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL------DVDAIVCDNTDPASLEEARGLFPHHLDTIVN 75 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence 5899999999999999999999999999999988776655443 2456789999999999988775 36999999
Q ss_pred cCCCCCC------CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 118 NQGVFVP------GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 118 ~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
|+|.... .++.+ ++++|++++++|+.+++++++.++|.|++ + ++||++||.+
T Consensus 76 ~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~---g~Iv~isS~~ 133 (223)
T PRK05884 76 VPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--G---GSIISVVPEN 133 (223)
T ss_pred CCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--C---CeEEEEecCC
Confidence 9985321 12333 57899999999999999999999999964 2 3899999865
No 184
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.87 E-value=9.4e-21 Score=142.76 Aligned_cols=132 Identities=19% Similarity=0.238 Sum_probs=99.6
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCC
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~i 112 (179)
.++++|+++||||++|||++++++|+++|++|++++|++.+..+ ... . +. ...+.+|+++.+++++. .+++
T Consensus 10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~--~~~--~-~~-~~~~~~D~~~~~~~~~~---~~~i 80 (245)
T PRK12367 10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE--SND--E-SP-NEWIKWECGKEESLDKQ---LASL 80 (245)
T ss_pred HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh--hhc--c-CC-CeEEEeeCCCHHHHHHh---cCCC
Confidence 35789999999999999999999999999999999998632111 111 1 11 24678999999887654 4579
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
|++|||||.... .+.++++|++.+++|+.+++.++|.++|.|++++.++...+++.||.++
T Consensus 81 DilVnnAG~~~~---~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~ 141 (245)
T PRK12367 81 DVLILNHGINPG---GRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAE 141 (245)
T ss_pred CEEEECCccCCc---CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccc
Confidence 999999997432 3467899999999999999999999999997643211223444455544
No 185
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.87 E-value=2.8e-20 Score=140.03 Aligned_cols=138 Identities=33% Similarity=0.498 Sum_probs=115.0
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh----C
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA----G 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~----~ 110 (179)
+++++++|||++++||.+++++|+++|++|++++|++++.++..+++... +.++..+.+|+++.++++++++.. +
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL-GTEVRGYAANVTDEEDVEATFAQIAEDFG 81 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999999999988777766665432 567888999999999988877653 6
Q ss_pred CCcEEEecCCCCCCCCc---------ccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 111 PVDVLVVNQGVFVPGEL---------EVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
++|++|||+|....... .+.+.++++.++++|+.+++.+.+.+.|.|.++.. ...|+++||..
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~--~~~iv~~ss~~ 153 (253)
T PRK08217 82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGS--KGVIINISSIA 153 (253)
T ss_pred CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--CeEEEEEcccc
Confidence 89999999997553221 56788999999999999999999999999976532 24789998864
No 186
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.87 E-value=2.9e-20 Score=139.37 Aligned_cols=139 Identities=37% Similarity=0.539 Sum_probs=114.7
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChh-HHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh----
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGE-KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA---- 109 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~---- 109 (179)
+++|+++||||+|++|++++++|+++|++|++..|+.+ ..+...+.+. ..+.++..+.+|+++++++++++++.
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVE-ALGRRAQAVQADVTDKAALEAAVAAAVERF 82 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHH-hcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999888676654 3333433333 23556888999999999998887653
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
+++|++||++|.....++.+.+.++++..+++|+.+++.+++.+.|.+.+.+. .+++++||..+.
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~~~i~~SS~~~~ 147 (249)
T PRK12825 83 GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRG---GRIVNISSVAGL 147 (249)
T ss_pred CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC---CEEEEECccccC
Confidence 68999999999877777778889999999999999999999999999877653 399999998764
No 187
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.87 E-value=2e-20 Score=141.83 Aligned_cols=139 Identities=35% Similarity=0.512 Sum_probs=115.7
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
.+++|+++||||+|+||++++++|+++|++|++++|+++..++..++.. +.++..+.+|+++++++++++++ .
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP---GAKVTATVADVADPAQVERVFDTAVERF 84 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh---cCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4688999999999999999999999999999999998876665544442 22567889999999998887765 4
Q ss_pred CCCcEEEecCCCC-CCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 110 GPVDVLVVNQGVF-VPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 110 ~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
+++|++||++|.. ...+..+.+.++++..+++|+.+++.+++.+.+.+.+.+. ..+++++||.++.
T Consensus 85 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~vv~~ss~~~~ 151 (264)
T PRK12829 85 GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGH--GGVIIALSSVAGR 151 (264)
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--CeEEEEecccccc
Confidence 7899999999987 4455667889999999999999999999999998876543 1479999887654
No 188
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.87 E-value=3.1e-20 Score=139.87 Aligned_cols=139 Identities=25% Similarity=0.285 Sum_probs=113.1
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC-hhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARS-GEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---- 108 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---- 108 (179)
.+++++++||||+|+||++++++|+++|+++++..++ .+..+...+.+.. .+.++..+.+|+++++++++++++
T Consensus 3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (252)
T PRK06077 3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKE-NGGEGIGVLADVSTREGCETLAKATIDR 81 (252)
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHH-cCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999998877654 3444433333332 245677889999999998777665
Q ss_pred hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
.+++|++|||||.....++.+.+.+.++..+++|+.+++.+++++.|.|++. ++|+++||.++..
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~iv~~sS~~~~~ 146 (252)
T PRK06077 82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-----GAIVNIASVAGIR 146 (252)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-----cEEEEEcchhccC
Confidence 4789999999998777777778889999999999999999999999998652 2899999987653
No 189
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.87 E-value=2.2e-20 Score=140.71 Aligned_cols=137 Identities=39% Similarity=0.584 Sum_probs=112.3
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhH--HHHHHHHHHhhcC-ceEEEEEeeCCC-HHHHHHHHHh-
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEK--LEEAKQSIQLATG-IEVATYSADVRD-FDAVKTALDE- 108 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~-~~v~~~~~D~~~-~~~v~~~~~~- 108 (179)
.+.+|+++||||++|||+++|++|+++|++|+++.++.+. .+...+... ..+ ..+....+|+++ .++++.+++.
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~~v~~~~~~~ 80 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADVSDDEESVEALVAAA 80 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence 3578999999999999999999999999998888887654 333333333 222 367778899998 8888776654
Q ss_pred ---hCCCcEEEecCCCCCC-CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 109 ---AGPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 109 ---~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
+|++|++|||||.... .++.+.+.++|+..+++|+.+++.+++.+.|.++++ +|+++||..+.
T Consensus 81 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~------~Iv~isS~~~~ 147 (251)
T COG1028 81 EEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ------RIVNISSVAGL 147 (251)
T ss_pred HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC------eEEEECCchhc
Confidence 5789999999999887 488889999999999999999999999888887721 99999998764
No 190
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.86 E-value=1.2e-20 Score=140.55 Aligned_cols=129 Identities=33% Similarity=0.485 Sum_probs=110.2
Q ss_pred EEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEecCC
Q 030328 41 FITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQG 120 (179)
Q Consensus 41 lItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~~ag 120 (179)
+||||+++||++++++|+++|++|++++|+++..++..+++. .+.++.++.+|+++.+++++++++.+++|++|||+|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag 78 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALG--GGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAA 78 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh--cCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 699999999999999999999999999999877766655553 245678899999999999999998889999999999
Q ss_pred CCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 121 VFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
.....++.+.+.+++++++++|+.+++.+++ .+.+. + .++|+++||.++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~---~g~iv~~ss~~~~~ 129 (230)
T PRK07041 79 DTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA--P---GGSLTFVSGFAAVR 129 (230)
T ss_pred CCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc--C---CeEEEEECchhhcC
Confidence 8777777788999999999999999999999 34442 2 23999999987653
No 191
>PRK06720 hypothetical protein; Provisional
Probab=99.86 E-value=3.5e-20 Score=131.99 Aligned_cols=142 Identities=20% Similarity=0.237 Sum_probs=111.5
Q ss_pred CcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHH----
Q 030328 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD---- 107 (179)
Q Consensus 32 ~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~---- 107 (179)
.+.+++|+++||||++|||.++|+.|+++|++|++++|+++..++..+++.. .+.+...+.+|+++.++++++++
T Consensus 11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~v~~~~~ 89 (169)
T PRK06720 11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITN-LGGEALFVSYDMEKQGDWQRVISITLN 89 (169)
T ss_pred ccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3457899999999999999999999999999999999998877766666653 34567778999999999877654
Q ss_pred hhCCCcEEEecCCCCCCC-CcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCC----CCcEEEEecccCcc
Q 030328 108 EAGPVDVLVVNQGVFVPG-ELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNG----GPASIALMSSQAGQ 177 (179)
Q Consensus 108 ~~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~----~~~~iv~iss~~g~ 177 (179)
.++++|++|||||..... ++.+.++++ ++ .+|+.+++..++.+.+.|.+++.. +.+++..+||.+..
T Consensus 90 ~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (169)
T PRK06720 90 AFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS 161 (169)
T ss_pred HcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence 468999999999987643 444434444 33 777788888899999998876532 55689999887643
No 192
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.86 E-value=9.3e-21 Score=138.36 Aligned_cols=116 Identities=18% Similarity=0.310 Sum_probs=103.5
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEec
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~~ 118 (179)
+++||||++|||++++++|+++ ++|++++|+.. .+.+|+++++++++++++.+++|++|||
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ 62 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------------DVQVDITDPASIRALFEKVGKVDAVVSA 62 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------------ceEecCCChHHHHHHHHhcCCCCEEEEC
Confidence 6999999999999999999999 99999998752 2578999999999999988899999999
Q ss_pred CCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 119 QGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 119 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
||.....++.+.++++|++.+++|+.+++++++.+.|.|.+. ++|+++||..+..
T Consensus 63 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----g~iv~iss~~~~~ 117 (199)
T PRK07578 63 AGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG-----GSFTLTSGILSDE 117 (199)
T ss_pred CCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CeEEEEcccccCC
Confidence 998777778788999999999999999999999999999642 2899999987753
No 193
>PRK09135 pteridine reductase; Provisional
Probab=99.86 E-value=3.9e-20 Score=138.94 Aligned_cols=138 Identities=24% Similarity=0.317 Sum_probs=112.5
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-hHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG-EKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
.++++++||||+|+||++++++|+++|++|++++|+. +..++..+.+....+..+..+.+|+++.+++.++++. .
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4678999999999999999999999999999999864 3444444444433344577889999999998887765 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
+++|++||+||.....++.+.+.++++..+++|+.+++.+++++.|.+.++. +.++++++..+
T Consensus 84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~----~~~~~~~~~~~ 146 (249)
T PRK09135 84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQR----GAIVNITDIHA 146 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCC----eEEEEEeChhh
Confidence 6899999999987777777778899999999999999999999999887653 27787776543
No 194
>PRK08324 short chain dehydrogenase; Validated
Probab=99.86 E-value=4.2e-20 Score=157.04 Aligned_cols=141 Identities=30% Similarity=0.425 Sum_probs=121.8
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
.+.+|+++||||+|+||++++++|+++|++|++++|+++..++..+++... .++..+.+|+++.+++++++++ +
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~--~~v~~v~~Dvtd~~~v~~~~~~~~~~~ 496 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP--DRALGVACDVTDEAAVQAAFEEAALAF 496 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc--CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 357899999999999999999999999999999999988777666655432 4678899999999998877664 5
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||||.....++.+.+.++|+..+++|+.+++.+++.+.|.|++++. .++|+++||..+..
T Consensus 497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~--~g~iV~vsS~~~~~ 563 (681)
T PRK08324 497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGL--GGSIVFIASKNAVN 563 (681)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CcEEEEECCccccC
Confidence 78999999999988888888999999999999999999999999999987553 14999999987654
No 195
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=99.86 E-value=1.6e-20 Score=140.99 Aligned_cols=128 Identities=38% Similarity=0.523 Sum_probs=111.1
Q ss_pred cCC--CchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h-CCCcEEE
Q 030328 44 GGS--SGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A-GPVDVLV 116 (179)
Q Consensus 44 Ga~--~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~-~~id~li 116 (179)
|++ +|||+++|++|+++|++|++++|+.++.+...+++....+.+ .+.+|+++++++++++++ + +++|++|
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV 78 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILV 78 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence 566 999999999999999999999999998777777776665655 499999999999887654 6 8999999
Q ss_pred ecCCCCCC----CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 117 VNQGVFVP----GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 117 ~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
||+|.... .++.+.+.++|++.+++|+.+++.++|++.|.|.+. ++||++||.++..
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----gsii~iss~~~~~ 139 (241)
T PF13561_consen 79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG-----GSIINISSIAAQR 139 (241)
T ss_dssp EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE-----EEEEEEEEGGGTS
T ss_pred ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-----CCcccccchhhcc
Confidence 99998765 678888999999999999999999999999988775 2899999987643
No 196
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.85 E-value=3.4e-20 Score=139.23 Aligned_cols=132 Identities=25% Similarity=0.277 Sum_probs=108.7
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh-----h---
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-----A--- 109 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~-----~--- 109 (179)
++++||||+|+||++++++|+++|++|++++|+.+.. . ....+.++..+.+|+++.+++++++++ +
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 75 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDG 75 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccC
Confidence 4799999999999999999999999999999986531 1 112345688899999999999885543 2
Q ss_pred CCCcEEEecCCCCCC-CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|++|||+|.... .++.+.+.++++..+++|+.+++.+++.+.|.|.+++.+ +|+++||..+..
T Consensus 76 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~iv~isS~~~~~ 142 (243)
T PRK07023 76 ASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAER---RILHISSGAARN 142 (243)
T ss_pred CCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCC---EEEEEeChhhcC
Confidence 378999999997654 466678899999999999999999999999999875443 999999987653
No 197
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.85 E-value=8.7e-20 Score=148.54 Aligned_cols=136 Identities=24% Similarity=0.350 Sum_probs=111.1
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh--hHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh---
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG--EKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~--- 108 (179)
.+++|+++|||++++||++++++|+++|++|++++++. +..++..+++ + ...+.+|+++.++++++++.
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~----~--~~~~~~Dv~~~~~~~~~~~~~~~ 280 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV----G--GTALALDITAPDAPARIAEHLAE 280 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc----C--CeEEEEeCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999998853 2233222221 2 34678999999998887764
Q ss_pred -hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 109 -AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 109 -~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
++++|++|||||......+.+.++++|+.++++|+.+++++.+.+.+.+..++. ++||++||.++..
T Consensus 281 ~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~---g~iv~~SS~~~~~ 348 (450)
T PRK08261 281 RHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDG---GRIVGVSSISGIA 348 (450)
T ss_pred hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCC---CEEEEECChhhcC
Confidence 468999999999888778888999999999999999999999999996544433 3999999987654
No 198
>PRK08017 oxidoreductase; Provisional
Probab=99.85 E-value=1e-19 Score=137.47 Aligned_cols=132 Identities=28% Similarity=0.380 Sum_probs=110.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh-----CC
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-----GP 111 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~-----~~ 111 (179)
.|+++||||+|+||++++++|+++|++|++++|++++.+...+ ..+..+.+|+++.+++++++++. ++
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~ 74 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-------LGFTGILLDLDDPESVERAADEVIALTDNR 74 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-------CCCeEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence 3689999999999999999999999999999999876543321 12567889999999987776653 57
Q ss_pred CcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 112 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+|.++||+|.....++.+.+.+++++.+++|+.|++.+++.++|.|.+.+.+ +|+++||.++..
T Consensus 75 ~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~---~iv~~ss~~~~~ 138 (256)
T PRK08017 75 LYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEG---RIVMTSSVMGLI 138 (256)
T ss_pred CeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCC---EEEEEcCccccc
Confidence 8999999998766677788999999999999999999999999999876543 899999987654
No 199
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.85 E-value=5.2e-20 Score=137.51 Aligned_cols=127 Identities=24% Similarity=0.282 Sum_probs=104.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEE
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEG--ARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~l 115 (179)
|+++||||++|||+++|++|+++| ..+++.+|+.... ..+.++.++++|+++.++++++.++++++|++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---------~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~l 71 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---------FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWL 71 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---------cccCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence 479999999999999999999985 5566666654321 11346788999999999999988888899999
Q ss_pred EecCCCCCC------CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 116 VVNQGVFVP------GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 116 i~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
|||||.... .++.+.+.+.|+..+++|+.+++.+++.++|.|++.+.+ +++++||..|
T Consensus 72 i~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~---~i~~iss~~~ 135 (235)
T PRK09009 72 INCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESA---KFAVISAKVG 135 (235)
T ss_pred EECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCc---eEEEEeeccc
Confidence 999998742 346678889999999999999999999999999765433 8999988655
No 200
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.84 E-value=1.8e-19 Score=143.89 Aligned_cols=130 Identities=22% Similarity=0.341 Sum_probs=103.5
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
++++|+++||||+||||++++++|+++|++|++++|++++.++..+ .....+..+.+|++|.+++.+.+ +++|
T Consensus 175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~----~~~~~v~~v~~Dvsd~~~v~~~l---~~ID 247 (406)
T PRK07424 175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEIN----GEDLPVKTLHWQVGQEAALAELL---EKVD 247 (406)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----hcCCCeEEEEeeCCCHHHHHHHh---CCCC
Confidence 4578999999999999999999999999999999998765543221 11234667889999998877655 4799
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCC-CCcEEEEecc
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNG-GPASIALMSS 173 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~iv~iss 173 (179)
++|||||.... .+.+.|++++.+++|+.|++.+++.++|.|++++.+ ....++++|+
T Consensus 248 iLInnAGi~~~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss 305 (406)
T PRK07424 248 ILIINHGINVH---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE 305 (406)
T ss_pred EEEECCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc
Confidence 99999997543 356889999999999999999999999999876532 2345677765
No 201
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.84 E-value=1.7e-19 Score=133.80 Aligned_cols=130 Identities=25% Similarity=0.419 Sum_probs=107.2
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh--CCCcEE
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVDVL 115 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~--~~id~l 115 (179)
|+++|||++++||++++++|+++|++|++++|+++..++... ..+..+.+|+++.+++++++++. +++|++
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~v 74 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA-------LGAEALALDVADPASVAGLAWKLDGEALDAA 74 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh-------ccceEEEecCCCHHHHHHHHHHhcCCCCCEE
Confidence 689999999999999999999999999999999776544321 12457899999999999887654 369999
Q ss_pred EecCCCCCC--CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 116 VVNQGVFVP--GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 116 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
|||+|.... .+..+.+.++++..+++|+.+++.+++++.|.|.+.. ++++++||.++..
T Consensus 75 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----g~iv~isS~~~~~ 135 (222)
T PRK06953 75 VYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAG----GVLAVLSSRMGSI 135 (222)
T ss_pred EECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccC----CeEEEEcCccccc
Confidence 999998642 3455678999999999999999999999999886532 3899999987644
No 202
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.84 E-value=7.6e-20 Score=135.93 Aligned_cols=130 Identities=25% Similarity=0.349 Sum_probs=108.2
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh--CCCcEE
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVDVL 115 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~--~~id~l 115 (179)
|+++||||++++|++++++|+++|++|++++|++++.++..+ . .++....+|++|+++++++++.. +++|++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~-----~~~~~~~~D~~d~~~~~~~~~~~~~~~id~v 75 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L-----PGVHIEKLDMNDPASLDQLLQRLQGQRFDLL 75 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c-----cccceEEcCCCCHHHHHHHHHHhhcCCCCEE
Confidence 789999999999999999999999999999999876543321 1 24567789999999999888764 479999
Q ss_pred EecCCCCCC--CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 116 VVNQGVFVP--GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 116 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
|||||...+ .++.+.+.++++..+++|+.+++.+++.+.|.|++.. +.++++||..|.
T Consensus 76 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~~iv~~ss~~g~ 135 (225)
T PRK08177 76 FVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQ----GVLAFMSSQLGS 135 (225)
T ss_pred EEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcC----CEEEEEccCccc
Confidence 999998643 3566788999999999999999999999999886432 389999987664
No 203
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.84 E-value=2.4e-19 Score=133.91 Aligned_cols=135 Identities=36% Similarity=0.522 Sum_probs=111.3
Q ss_pred EEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-hHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCCCcE
Q 030328 40 VFITGGSSGIGLALAHQAAKEGARVSILARSG-EKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVDV 114 (179)
Q Consensus 40 vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~id~ 114 (179)
++|||++++||++++++|+++|++|++++|+. +..++..+.+. ..+.++..+.+|+++.+++++++++ .+++|+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELK-AYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI 79 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 58999999999999999999999999999875 34444444443 2355688899999999998887765 378999
Q ss_pred EEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 115 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+||++|.....++.+.+.+++++.+++|+.+++.+++.+.+.+.+.+. ++++++||.++..
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~~~v~~sS~~~~~ 140 (239)
T TIGR01830 80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRS---GRIINISSVVGLM 140 (239)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC---eEEEEECCccccC
Confidence 999999876666667788999999999999999999999999876543 3899999987654
No 204
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.84 E-value=1.4e-19 Score=134.94 Aligned_cols=125 Identities=30% Similarity=0.429 Sum_probs=106.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh---CCC
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA---GPV 112 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~---~~i 112 (179)
.+|+++||||+++||++++++|+++|++|++++|+.+.. . . ..++.+|+++.+++++++++. .++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~----~--~~~~~~D~~~~~~~~~~~~~~~~~~~~ 69 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------F----P--GELFACDLADIEQTAATLAQINEIHPV 69 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------c----C--ceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence 578999999999999999999999999999999986530 0 1 145789999999988776642 368
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
|++|||+|.....++.+.+.+++++.+++|+.+++.+.+.++|.|++.+. ++|+++||..
T Consensus 70 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~~iv~~sS~~ 129 (234)
T PRK07577 70 DAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQ---GRIVNICSRA 129 (234)
T ss_pred cEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC---cEEEEEcccc
Confidence 99999999887777778899999999999999999999999999987654 3899999975
No 205
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.84 E-value=2.5e-19 Score=132.83 Aligned_cols=131 Identities=28% Similarity=0.481 Sum_probs=112.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEE
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li 116 (179)
+|+++||||+|++|++++++|+++ ++|++++|+.+..++..++. ..+.++.+|++|.++++++++..+++|++|
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~id~vi 76 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL-----PGATPFPVDLTDPEAIAAAVEQLGRLDVLV 76 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh-----ccceEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence 579999999999999999999999 99999999976654443322 246778999999999999998877899999
Q ss_pred ecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 117 VNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 117 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
|++|.....++.+.+++++++.+++|+.+++.+++.+++.+++.. ++++++||..+.
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~~v~~ss~~~~ 133 (227)
T PRK08219 77 HNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH----GHVVFINSGAGL 133 (227)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC----CeEEEEcchHhc
Confidence 999987766777788999999999999999999999999887753 389999987764
No 206
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=99.83 E-value=4.6e-19 Score=128.13 Aligned_cols=142 Identities=28% Similarity=0.385 Sum_probs=109.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHc-CCeEE-EEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh-----
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKE-GARVS-ILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA----- 109 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~-g~~v~-~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~----- 109 (179)
-|.++||||++|||..++++|.+. |-.++ ...|+++.+.+..+.. .....+++.++.|+++.++++.+.++.
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k-~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg 81 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALK-SKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG 81 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHh-hccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence 456999999999999999999964 55554 4556666642222211 123578999999999999998887763
Q ss_pred -CCCcEEEecCCCCCC-CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCC--------CCcEEEEecccCcccC
Q 030328 110 -GPVDVLVVNQGVFVP-GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNG--------GPASIALMSSQAGQVG 179 (179)
Q Consensus 110 -~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--------~~~~iv~iss~~g~~g 179 (179)
.++++++||||.... ....+.+.+.|.+++++|+.|++.++|+++|.+++.... .+..|+|+||.+|.+|
T Consensus 82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~ 161 (249)
T KOG1611|consen 82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG 161 (249)
T ss_pred cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccC
Confidence 368999999998764 344456788899999999999999999999999876532 3457999999988653
No 207
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.83 E-value=6.6e-19 Score=131.65 Aligned_cols=134 Identities=30% Similarity=0.425 Sum_probs=109.7
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
.+++|+++||||+|+||.+++++|+++|++|++++|+++..++..+++.. ...+..+.+|+++.+++++++++ +
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSK--YGNIHYVVGDVSSTESARNVIEKAAKVL 79 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 35789999999999999999999999999999999998877665554432 23577889999999999887765 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
+++|.+++++|.....+.. +.++++..+++|+.+++.+.+.++|.|.+. ++++++||..+
T Consensus 80 ~~id~ii~~ag~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~iv~~ss~~~ 139 (238)
T PRK05786 80 NAIDGLVVTVGGYVEDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKEG-----SSIVLVSSMSG 139 (238)
T ss_pred CCCCEEEEcCCCcCCCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhcC-----CEEEEEecchh
Confidence 6789999999875543333 348899999999999999999999988542 28999998765
No 208
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.83 E-value=3.3e-19 Score=134.33 Aligned_cols=134 Identities=24% Similarity=0.351 Sum_probs=107.7
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-hHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh----C--
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSG-EKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA----G-- 110 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~----~-- 110 (179)
|+++||||+|+||++++++|+++|++|++++|++ +..++ +....+.++..+.+|+++.+++++++++. +
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 77 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTK----LAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQED 77 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHH----HHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcc
Confidence 6899999999999999999999999999999986 33332 22223456788999999999998887653 2
Q ss_pred CC--cEEEecCCCCCC-CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 111 PV--DVLVVNQGVFVP-GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 111 ~i--d~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
++ +++|+|+|...+ .++.+.+.++|++.+++|+.+++.+++.++|.|++.+. .++|+++||..+.
T Consensus 78 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~ 145 (251)
T PRK06924 78 NVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKV--DKRVINISSGAAK 145 (251)
T ss_pred cCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCC--CceEEEecchhhc
Confidence 12 279999997543 46778899999999999999999999999999976432 2489999997654
No 209
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.80 E-value=1.4e-18 Score=130.62 Aligned_cols=130 Identities=24% Similarity=0.351 Sum_probs=101.6
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChh-HHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGE-KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
+.+|+++||||+|+||++++++|+++|++|++++|+.+ ..+....++.. .+.++..+.+|+++++++++++++ +
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEA-AGGRASAVGADLTDEESVAALMDTAREEF 82 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 57899999999999999999999999999999998754 34444444433 245678899999999998887764 3
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
+++|++|||||...... .+++..+++|+.+++.+++.+.|.|.+ . +++|++||..+
T Consensus 83 ~~~d~vi~~ag~~~~~~------~~~~~~~~vn~~~~~~l~~~~~~~~~~--~---~~iv~isS~~~ 138 (248)
T PRK07806 83 GGLDALVLNASGGMESG------MDEDYAMRLNRDAQRNLARAALPLMPA--G---SRVVFVTSHQA 138 (248)
T ss_pred CCCcEEEECCCCCCCCC------CCcceeeEeeeHHHHHHHHHHHhhccC--C---ceEEEEeCchh
Confidence 67999999998643211 124567899999999999999998853 2 28999998543
No 210
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.79 E-value=4.3e-19 Score=123.58 Aligned_cols=142 Identities=32% Similarity=0.439 Sum_probs=117.7
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHH----hh
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD----EA 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~----~~ 109 (179)
..+|-+.+|||+.+|+|++.|.+|+++|+.|++.|-.....++..+++ |.++.+.++|++++.++...+. ++
T Consensus 6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel----g~~~vf~padvtsekdv~aala~ak~kf 81 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL----GGKVVFTPADVTSEKDVRAALAKAKAKF 81 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh----CCceEEeccccCcHHHHHHHHHHHHhhc
Confidence 357889999999999999999999999999999999887777666665 6789999999999999887654 47
Q ss_pred CCCcEEEecCCCCCCC------CcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhc---cCCCCcEEEEecccCcccC
Q 030328 110 GPVDVLVVNQGVFVPG------ELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKR---QNGGPASIALMSSQAGQVG 179 (179)
Q Consensus 110 ~~id~li~~ag~~~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~~~~iv~iss~~g~~g 179 (179)
|++|.++||||..... .-...+-|++++++++|+.|+|+..+.....|.+. +.|.++.|||..|++.+-|
T Consensus 82 grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdg 160 (260)
T KOG1199|consen 82 GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDG 160 (260)
T ss_pred cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecC
Confidence 9999999999975321 12235789999999999999999998888887543 3456779999999987644
No 211
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.78 E-value=5.6e-18 Score=157.60 Aligned_cols=136 Identities=24% Similarity=0.310 Sum_probs=110.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChh------------------------------------------
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKE-GARVSILARSGE------------------------------------------ 72 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~-g~~v~~~~r~~~------------------------------------------ 72 (179)
+++++|||||++|||.++|++|+++ |++|++++|+..
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 5899999999999999999999998 699999999820
Q ss_pred -----HHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh---CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhh
Q 030328 73 -----KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA---GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNII 144 (179)
Q Consensus 73 -----~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~---~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 144 (179)
+.++..+++ ...|.++.++.+|++|.+++++++++. +++|++|||||....+.+.+.+.++|++++++|+.
T Consensus 2076 ~~~~~ei~~~la~l-~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813 2076 VLSSLEIAQALAAF-KAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred cchhHHHHHHHHHH-HhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence 011111122 124677889999999999998887653 57999999999988888899999999999999999
Q ss_pred HHHHHHHHHcHHHHhccCCCCcEEEEecccCcccC
Q 030328 145 GSFHMIKAALPLIKKRQNGGPASIALMSSQAGQVG 179 (179)
Q Consensus 145 ~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~g 179 (179)
|++++++++.+.+. ..||++||++|..|
T Consensus 2155 G~~~Ll~al~~~~~-------~~IV~~SSvag~~G 2182 (2582)
T TIGR02813 2155 GLLSLLAALNAENI-------KLLALFSSAAGFYG 2182 (2582)
T ss_pred HHHHHHHHHHHhCC-------CeEEEEechhhcCC
Confidence 99999988755321 27999999998765
No 212
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.78 E-value=8.2e-18 Score=119.50 Aligned_cols=133 Identities=29% Similarity=0.413 Sum_probs=105.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHHHHH---HHHHhhcCceEEEEEeeCCCHHHHHHHHHh----h
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLEEAK---QSIQLATGIEVATYSADVRDFDAVKTALDE----A 109 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~---~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~ 109 (179)
|+++||||+++||.+++++|+++|+ .|++++|+++..+... +++. ..+.++..+.+|+++++++++++++ .
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELE-ALGAEVTVVACDVADRAALAAALAAIPARL 79 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999999997 5788888765433222 2232 2356778899999999998877665 4
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|.+||++|.....++.+.+.++++..+++|+.+++.+.+.+.+ . +..+++++||..+..
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~---~~~~ii~~ss~~~~~ 141 (180)
T smart00822 80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD----L---PLDFFVLFSSVAGVL 141 (180)
T ss_pred CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc----C---CcceEEEEccHHHhc
Confidence 7899999999987766777889999999999999999999998732 2 234899999976643
No 213
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.78 E-value=9.8e-18 Score=120.89 Aligned_cols=133 Identities=31% Similarity=0.451 Sum_probs=98.9
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChh---HHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh----C
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGA-RVSILARSGE---KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA----G 110 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~---~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~----~ 110 (179)
+++|||+.|+||..++++|+++|+ +++++.|+.. +.++..+++.. .+.++.++.+|++|++++.+++++. +
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~-~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELES-AGARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHH-TT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHh-CCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 789999999999999999999985 5899999832 33444555544 3789999999999999999998763 6
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcccC
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQVG 179 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~g 179 (179)
+++.+||.||...+.++.+.++++++.++...+.|..++.+.+.+ .+...++.+||+++..|
T Consensus 81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~-------~~l~~~i~~SSis~~~G 142 (181)
T PF08659_consen 81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN-------RPLDFFILFSSISSLLG 142 (181)
T ss_dssp -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT-------TTTSEEEEEEEHHHHTT
T ss_pred CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc-------CCCCeEEEECChhHhcc
Confidence 899999999998888999999999999999999999999887744 23459999999987765
No 214
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.72 E-value=9.6e-17 Score=125.41 Aligned_cols=129 Identities=16% Similarity=0.191 Sum_probs=98.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhh-cCceEEEEEeeCCCHHHHHHHHHhhCCCcE
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLA-TGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~v~~~~~~~~~id~ 114 (179)
.+|+++||||+|+||++++++|+++|++|++++|+.+..++........ ...++.++.+|+++.++++++++ ++|+
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~ 80 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID---GCET 80 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc---CCCE
Confidence 4789999999999999999999999999999888876544332222111 12457888999999999888876 5899
Q ss_pred EEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 115 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
+||+||.... ..+.+.+...+++|+.+++++++++.+.+ + ..+||++||.++.
T Consensus 81 vih~A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~---~~~iv~~SS~~~~ 133 (325)
T PLN02989 81 VFHTASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVS---S---VKRVILTSSMAAV 133 (325)
T ss_pred EEEeCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcC---C---ceEEEEecchhhe
Confidence 9999996432 22345577889999999999999886642 1 2389999997653
No 215
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.71 E-value=4.8e-16 Score=122.76 Aligned_cols=128 Identities=14% Similarity=0.150 Sum_probs=98.6
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcE
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~ 114 (179)
++||+++||||+|+||++++++|+++|++|++++|+.+........+. .+.++..+.+|+++.+++.+++++. ++|+
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~ 78 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN--LAKKIEDHFGDIRDAAKLRKAIAEF-KPEI 78 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh--hcCCceEEEccCCCHHHHHHHHhhc-CCCE
Confidence 468999999999999999999999999999999998765443333222 1235667899999999999998865 5899
Q ss_pred EEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 115 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
+||+|+.... ..+.+++...+++|+.++..+++++.+ .+ ...++|++||.+
T Consensus 79 vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~~----~~--~~~~iv~~SS~~ 129 (349)
T TIGR02622 79 VFHLAAQPLV----RKSYADPLETFETNVMGTVNLLEAIRA----IG--SVKAVVNVTSDK 129 (349)
T ss_pred EEECCccccc----ccchhCHHHHHHHhHHHHHHHHHHHHh----cC--CCCEEEEEechh
Confidence 9999985322 234456778899999999999998632 11 124899999864
No 216
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=99.68 E-value=1.3e-15 Score=112.01 Aligned_cols=139 Identities=24% Similarity=0.354 Sum_probs=112.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcC-----CeEEEEecChhHHHHHHHHHHhhc---CceEEEEEeeCCCHHHHHHHH-
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEG-----ARVSILARSGEKLEEAKQSIQLAT---GIEVATYSADVRDFDAVKTAL- 106 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g-----~~v~~~~r~~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~v~~~~- 106 (179)
.-|+++|||+++|+|.++|.+|.+.. .++.+++|+.+++++..+.+..-. ..++.+...|+++..++.+..
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 35899999999999999999998653 346788999999998888876432 457888999999999986654
Q ss_pred ---HhhCCCcEEEecCCCCCCCCc---------------------------ccCCHHHHHHHHHhhhhHHHHHHHHHcHH
Q 030328 107 ---DEAGPVDVLVVNQGVFVPGEL---------------------------EVQSLDEVRLMIDVNIIGSFHMIKAALPL 156 (179)
Q Consensus 107 ---~~~~~id~li~~ag~~~~~~~---------------------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 156 (179)
+++.++|.+..|||....+.+ ...+.|++...|+.|+.|++++.+.+.|.
T Consensus 82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl 161 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL 161 (341)
T ss_pred HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence 446799999999998654311 12466888999999999999999999999
Q ss_pred HHhccCCCCcEEEEecccCcc
Q 030328 157 IKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 157 ~~~~~~~~~~~iv~iss~~g~ 177 (179)
+-.+... .+|.+||..+.
T Consensus 162 l~~~~~~---~lvwtSS~~a~ 179 (341)
T KOG1478|consen 162 LCHSDNP---QLVWTSSRMAR 179 (341)
T ss_pred hhcCCCC---eEEEEeecccc
Confidence 8776543 89999998653
No 217
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.68 E-value=1.8e-15 Score=122.93 Aligned_cols=134 Identities=19% Similarity=0.278 Sum_probs=97.5
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHH----------------HHHHHHHHhhcCceEEEEEeeCC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKL----------------EEAKQSIQLATGIEVATYSADVR 97 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~----------------~~~~~~~~~~~~~~v~~~~~D~~ 97 (179)
..++|++|||||+|+||++++++|+++|++|+++|+..... .+..+.+....+.++.++.+|++
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 123 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC 123 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence 35789999999999999999999999999999987532110 00011111112345788999999
Q ss_pred CHHHHHHHHHhhCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 98 DFDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 98 ~~~~v~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
|.+.+++++++. ++|++||+|+... .+....++++++..+++|+.|+.++++++... +...++|++||.+
T Consensus 124 d~~~v~~~l~~~-~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~------gv~~~~V~~SS~~ 193 (442)
T PLN02572 124 DFEFLSEAFKSF-EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF------APDCHLVKLGTMG 193 (442)
T ss_pred CHHHHHHHHHhC-CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh------CCCccEEEEecce
Confidence 999999999875 5899999997533 23334456667788999999999999987432 1113789888864
No 218
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.68 E-value=1.2e-15 Score=123.45 Aligned_cols=133 Identities=23% Similarity=0.338 Sum_probs=111.8
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChhHHHHHHHHHHhhc-CceEEEEEeeCCCHHHHHHHHHhhCCC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGEKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDEAGPV 112 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~v~~~~~~~~~i 112 (179)
+.||+++||||+|.||+++|+++++.+.+ +++.+|++-++.....++.... ..+..++.+|+.|.+.++++++++ ++
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-kv 326 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-KV 326 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-CC
Confidence 68999999999999999999999999865 8889999999988888887643 367888999999999999999987 69
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcccC
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQVG 179 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~g 179 (179)
|+++|.|+.-|.+..+..+ .+.+.+|+.|+.++.+++... +...+|.+|+-.+..|
T Consensus 327 d~VfHAAA~KHVPl~E~nP----~Eai~tNV~GT~nv~~aa~~~-------~V~~~V~iSTDKAV~P 382 (588)
T COG1086 327 DIVFHAAALKHVPLVEYNP----EEAIKTNVLGTENVAEAAIKN-------GVKKFVLISTDKAVNP 382 (588)
T ss_pred ceEEEhhhhccCcchhcCH----HHHHHHhhHhHHHHHHHHHHh-------CCCEEEEEecCcccCC
Confidence 9999999998876555433 345899999999999998442 2448999999876543
No 219
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.68 E-value=2.7e-15 Score=117.41 Aligned_cols=125 Identities=22% Similarity=0.274 Sum_probs=95.2
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEG--ARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~i 112 (179)
+++|+++||||+|+||++++++|+++| ++|++.+|+....++..+++ .+.++.++.+|++|.+++.++++ ++
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~---~~~~~~~v~~Dl~d~~~l~~~~~---~i 75 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF---PAPCLRFFIGDVRDKERLTRALR---GV 75 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh---CCCcEEEEEccCCCHHHHHHHHh---cC
Confidence 368999999999999999999999986 78999998766543333222 12457788999999999988876 58
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
|++||+||.... +..+.++ ...+++|+.++.++++++.+ .+ ..+||++||...
T Consensus 76 D~Vih~Ag~~~~-~~~~~~~---~~~~~~Nv~g~~~ll~aa~~----~~---~~~iV~~SS~~~ 128 (324)
T TIGR03589 76 DYVVHAAALKQV-PAAEYNP---FECIRTNINGAQNVIDAAID----NG---VKRVVALSTDKA 128 (324)
T ss_pred CEEEECcccCCC-chhhcCH---HHHHHHHHHHHHHHHHHHHH----cC---CCEEEEEeCCCC
Confidence 999999996543 2222233 45799999999999998754 22 238999998654
No 220
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.68 E-value=2.5e-15 Score=123.51 Aligned_cols=126 Identities=19% Similarity=0.244 Sum_probs=98.5
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhh--------cCceEEEEEeeCCCHHHHHHHH
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLA--------TGIEVATYSADVRDFDAVKTAL 106 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--------~~~~v~~~~~D~~~~~~v~~~~ 106 (179)
..+|+++||||+|+||++++++|+++|++|++++|+.++.+...+++... ...++.++.+|+++.+++++.+
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL 157 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL 157 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence 36889999999999999999999999999999999998877665544321 0134788999999998877655
Q ss_pred HhhCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 107 DEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 107 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
+++|+||||+|.... ...++...+++|+.++.++++++.. .+ .++||++||..+
T Consensus 158 ---ggiDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~~----ag---VgRIV~VSSiga 211 (576)
T PLN03209 158 ---GNASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAATV----AK---VNHFILVTSLGT 211 (576)
T ss_pred ---cCCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHHH----hC---CCEEEEEccchh
Confidence 479999999986432 1124677889999999999888643 22 349999999865
No 221
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.67 E-value=3.5e-15 Score=117.99 Aligned_cols=131 Identities=18% Similarity=0.179 Sum_probs=97.9
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcE
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~ 114 (179)
..++++|||||+|.||++++++|+++|++|++++|+.+..+...+.+. .+.++.++.+|+++.++++++++ ++|+
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~---~~d~ 82 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWK--EGDRLRLFRADLQEEGSFDEAVK---GCDG 82 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhc--cCCeEEEEECCCCCHHHHHHHHc---CCCE
Confidence 467899999999999999999999999999999998765554433332 13567889999999998888776 5899
Q ss_pred EEecCCCCCCCC-cccCCHHHH--HHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 115 LVVNQGVFVPGE-LEVQSLDEV--RLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 115 li~~ag~~~~~~-~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
+||+|+...... ....+++.+ ..++++|+.++..+++++.+.. ...+||++||.+.
T Consensus 83 Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~------~~~~~v~~SS~~v 141 (353)
T PLN02896 83 VFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK------TVKRVVFTSSIST 141 (353)
T ss_pred EEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC------CccEEEEEechhh
Confidence 999999754322 122233333 4577888899999999874421 1348999998653
No 222
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.66 E-value=2.2e-15 Score=118.52 Aligned_cols=134 Identities=16% Similarity=0.116 Sum_probs=99.0
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHH-HHHHHHH---hhcCceEEEEEeeCCCHHHHHHHHHhh
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLE-EAKQSIQ---LATGIEVATYSADVRDFDAVKTALDEA 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~-~~~~~~~---~~~~~~v~~~~~D~~~~~~v~~~~~~~ 109 (179)
+.++|++|||||+|+||++++++|.++|++|++++|+++... ...+.+. ...+.++.++.+|++|.++++++++..
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 82 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI 82 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence 467899999999999999999999999999999998754211 1111111 011345788999999999999998876
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEeccc
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~ 174 (179)
++|+|||+|+...... ..+..+..+++|+.++.++++++.+.+.++ +...++|++||.
T Consensus 83 -~~d~Vih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~--~~~~~~v~~Ss~ 140 (340)
T PLN02653 83 -KPDEVYNLAAQSHVAV----SFEMPDYTADVVATGALRLLEAVRLHGQET--GRQIKYYQAGSS 140 (340)
T ss_pred -CCCEEEECCcccchhh----hhhChhHHHHHHHHHHHHHHHHHHHhcccc--ccceeEEEeccH
Confidence 5899999999754321 223446678999999999999987765432 223478888774
No 223
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.66 E-value=2.2e-15 Score=118.68 Aligned_cols=128 Identities=18% Similarity=0.137 Sum_probs=92.7
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhH-----HHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCC
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEK-----LEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~i 112 (179)
|++|||||+|+||++++++|+++|++|++++|+.+. .+...+......+..+.++.+|++|.+++.++++.. ++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-~~ 79 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI-KP 79 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC-CC
Confidence 689999999999999999999999999999987642 111111111111345788999999999999999876 48
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEeccc
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~ 174 (179)
|++||+|+...... ..+.....+++|+.|+..+++++.+.-.+ ...++|++||.
T Consensus 80 d~ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~----~~~~~v~~SS~ 133 (343)
T TIGR01472 80 TEIYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGLI----KSVKFYQASTS 133 (343)
T ss_pred CEEEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCCC----cCeeEEEeccH
Confidence 99999999755322 12223456788999999999988553111 11378898886
No 224
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.65 E-value=3.8e-15 Score=116.30 Aligned_cols=128 Identities=16% Similarity=0.174 Sum_probs=94.9
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhh-cCceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLA-TGIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
-++|+++||||+|.||++++++|+++|++|+++.|+.+..+...+..... ...++.++.+|+++.+.++++++ ++|
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d 79 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE---GCD 79 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh---CCC
Confidence 36899999999999999999999999999998888876544332222111 12357888999999998888887 589
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
++||+|+..... ..+.....+++|+.++.++++++.. . .+..+||++||.+.
T Consensus 80 ~vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~~~~~----~--~~v~rvV~~SS~~~ 131 (322)
T PLN02986 80 AVFHTASPVFFT-----VKDPQTELIDPALKGTINVLNTCKE----T--PSVKRVILTSSTAA 131 (322)
T ss_pred EEEEeCCCcCCC-----CCCchhhhhHHHHHHHHHHHHHHHh----c--CCccEEEEecchhh
Confidence 999999864321 1122345789999999999988632 1 12348999999764
No 225
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.65 E-value=4e-15 Score=114.31 Aligned_cols=128 Identities=19% Similarity=0.181 Sum_probs=100.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHH--HHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEA--KQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
.++.++||||+|.||++++++|+++|++|..+.|+++..+.. ..++.. ...+...+.+|+.|++++++.++ +.|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~-a~~~l~l~~aDL~d~~sf~~ai~---gcd 80 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEG-AKERLKLFKADLLDEGSFDKAID---GCD 80 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhccc-CcccceEEeccccccchHHHHHh---CCC
Confidence 678999999999999999999999999999999999874332 222321 23458899999999999999988 589
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+|+|.|.+...... +...++++..+.|+.++++++... + ...+||++||.++..
T Consensus 81 gVfH~Asp~~~~~~-----~~e~~li~pav~Gt~nVL~ac~~~----~--sVkrvV~TSS~aAv~ 134 (327)
T KOG1502|consen 81 GVFHTASPVDFDLE-----DPEKELIDPAVKGTKNVLEACKKT----K--SVKRVVYTSSTAAVR 134 (327)
T ss_pred EEEEeCccCCCCCC-----CcHHhhhhHHHHHHHHHHHHHhcc----C--CcceEEEeccHHHhc
Confidence 99999996554221 122368999999999999998432 1 356999999988754
No 226
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.65 E-value=5.9e-15 Score=115.99 Aligned_cols=128 Identities=19% Similarity=0.238 Sum_probs=93.3
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhc-CceEEEEEeeCCCHHHHHHHHHhhCCC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLAT-GIEVATYSADVRDFDAVKTALDEAGPV 112 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~v~~~~~~~~~i 112 (179)
+.++++++||||+|.||++++++|.++|++|+++.|+.+....... +.... ..++.++.+|++|.+++.+.++ ++
T Consensus 6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~ 81 (338)
T PLN00198 6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQELGDLKIFGADLTDEESFEAPIA---GC 81 (338)
T ss_pred CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCCCCceEEEEcCCCChHHHHHHHh---cC
Confidence 4568999999999999999999999999999988887654332211 11101 1257788999999998888776 58
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
|++||+|+... .. ..+.....+++|+.++..+++++.+. . +..+++++||.+.
T Consensus 82 d~vih~A~~~~---~~--~~~~~~~~~~~nv~g~~~ll~a~~~~----~--~~~~~v~~SS~~~ 134 (338)
T PLN00198 82 DLVFHVATPVN---FA--SEDPENDMIKPAIQGVHNVLKACAKA----K--SVKRVILTSSAAA 134 (338)
T ss_pred CEEEEeCCCCc---cC--CCChHHHHHHHHHHHHHHHHHHHHhc----C--CccEEEEeeccee
Confidence 99999998532 11 11233456899999999999987442 1 2348999999753
No 227
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.63 E-value=8.5e-16 Score=116.86 Aligned_cols=127 Identities=20% Similarity=0.324 Sum_probs=91.3
Q ss_pred EEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhc-C--c--eEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 40 VFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLEEAKQSIQLAT-G--I--EVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 40 vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~-~--~--~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
+|||||+|.||+++|+++++.+. +++++|+++..+-+..+++.... + . .+..+.+|+.|.+.++++++++ ++|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~-~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY-KPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT---T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc-CCC
Confidence 69999999999999999999985 59999999999988888885432 2 2 2345688999999999999877 699
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCccc
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQV 178 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~ 178 (179)
+++|.|+.-|.+..+. . ..+.+++|+.|+.++++++..+ +..++|++||-.+..
T Consensus 80 iVfHaAA~KhVpl~E~-~---p~eav~tNv~GT~nv~~aa~~~-------~v~~~v~ISTDKAv~ 133 (293)
T PF02719_consen 80 IVFHAAALKHVPLMED-N---PFEAVKTNVLGTQNVAEAAIEH-------GVERFVFISTDKAVN 133 (293)
T ss_dssp EEEE------HHHHCC-C---HHHHHHHHCHHHHHHHHHHHHT-------T-SEEEEEEECGCSS
T ss_pred EEEEChhcCCCChHHh-C---HHHHHHHHHHHHHHHHHHHHHc-------CCCEEEEccccccCC
Confidence 9999999887654443 2 3446999999999999988542 244999999976553
No 228
>PLN02214 cinnamoyl-CoA reductase
Probab=99.63 E-value=5e-15 Score=116.73 Aligned_cols=122 Identities=19% Similarity=0.257 Sum_probs=93.1
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHH-HHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEA-KQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
.++|+++||||+|.||++++++|.++|++|.+++|+.+..... ..++. ....++.++.+|+++.++++++++ ++|
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~---~~d 83 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELE-GGKERLILCKADLQDYEALKAAID---GCD 83 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhh-CCCCcEEEEecCcCChHHHHHHHh---cCC
Confidence 4678999999999999999999999999999999986543221 11221 112357788899999999888876 589
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
++||+|+... +++...+++|+.++.++++++.. .+ ..+||++||.++
T Consensus 84 ~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~~----~~---v~r~V~~SS~~a 130 (342)
T PLN02214 84 GVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAAE----AK---VKRVVITSSIGA 130 (342)
T ss_pred EEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHHh----cC---CCEEEEecccee
Confidence 9999998532 23456799999999999998743 21 338999999654
No 229
>PLN02240 UDP-glucose 4-epimerase
Probab=99.62 E-value=2.5e-14 Score=112.85 Aligned_cols=129 Identities=22% Similarity=0.341 Sum_probs=95.1
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHh---hcCceEEEEEeeCCCHHHHHHHHHhhC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQL---ATGIEVATYSADVRDFDAVKTALDEAG 110 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~~v~~~~~D~~~~~~v~~~~~~~~ 110 (179)
.+++|+++||||+|++|++++++|.++|++|++++|......+..+.+.. ..+.++..+.+|+++.+++.+++++.
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~- 80 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST- 80 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence 46789999999999999999999999999999998754322211111211 11345778899999999999988764
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEeccc
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~ 174 (179)
++|++||+|+..... .+.+.+...+++|+.++..+++++ .+.+ ..+++++||.
T Consensus 81 ~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~---~~~~v~~Ss~ 133 (352)
T PLN02240 81 RFDAVIHFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVM----AKHG---CKKLVFSSSA 133 (352)
T ss_pred CCCEEEEccccCCcc----ccccCHHHHHHHHHHHHHHHHHHH----HHcC---CCEEEEEccH
Confidence 689999999864322 123456778999999999988865 2222 2389999985
No 230
>PLN02583 cinnamoyl-CoA reductase
Probab=99.61 E-value=1.4e-14 Score=112.06 Aligned_cols=126 Identities=14% Similarity=0.176 Sum_probs=92.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhH--HHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEK--LEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
.+|+++||||+|+||++++++|+++|++|++++|+.+. ..+...++.. .+.++.++.+|++|.+++.+.+. ..|
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~d~~~~~~~l~---~~d 80 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSC-EEERLKVFDVDPLDYHSILDALK---GCS 80 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhccc-CCCceEEEEecCCCHHHHHHHHc---CCC
Confidence 47899999999999999999999999999999986432 2222222211 13457788999999988877765 578
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
.++|.++.... .+ ++++..+++|+.|++++++++.+.+ ...+||++||.++.
T Consensus 81 ~v~~~~~~~~~-----~~-~~~~~~~~~nv~gt~~ll~aa~~~~------~v~riV~~SS~~a~ 132 (297)
T PLN02583 81 GLFCCFDPPSD-----YP-SYDEKMVDVEVRAAHNVLEACAQTD------TIEKVVFTSSLTAV 132 (297)
T ss_pred EEEEeCccCCc-----cc-ccHHHHHHHHHHHHHHHHHHHHhcC------CccEEEEecchHhe
Confidence 88887653221 11 2457789999999999999986542 12389999998653
No 231
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.61 E-value=1.6e-14 Score=114.18 Aligned_cols=130 Identities=20% Similarity=0.239 Sum_probs=92.7
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEE-EEecChhHHHHHHHHHHh-hcCceEEEEEeeCCCHHHHHHHHHhhCCCcEE
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVS-ILARSGEKLEEAKQSIQL-ATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~-~~~r~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~l 115 (179)
|++|||||+|+||++++++|.++|++++ +.++.++. .... .+.. ..+.++.++.+|++|.+++++++++. ++|++
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~D~V 78 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNLM-SLAPVAQSERFAFEKVDICDRAELARVFTEH-QPDCV 78 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cchh-hhhhcccCCceEEEECCCcChHHHHHHHhhc-CCCEE
Confidence 6899999999999999999999998855 45554321 1111 1111 11335677899999999999998864 58999
Q ss_pred EecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhcc--CCCCcEEEEeccc
Q 030328 116 VVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQ--NGGPASIALMSSQ 174 (179)
Q Consensus 116 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~~~~iv~iss~ 174 (179)
||+||.... +.+.+.++..+++|+.++..+++++.+.|.... ..+..+++++||.
T Consensus 79 ih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~ 135 (355)
T PRK10217 79 MHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTD 135 (355)
T ss_pred EECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecch
Confidence 999986432 123456688999999999999999876542111 1123489999985
No 232
>PLN02650 dihydroflavonol-4-reductase
Probab=99.60 E-value=3.3e-14 Score=112.36 Aligned_cols=126 Identities=18% Similarity=0.185 Sum_probs=93.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhh-cCceEEEEEeeCCCHHHHHHHHHhhCCCcE
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLA-TGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~v~~~~~~~~~id~ 114 (179)
.+|++|||||+|.||++++++|+++|++|++++|+.+..+......... ...++.++.+|+++.+.++++++ .+|+
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~---~~d~ 80 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR---GCTG 80 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh---CCCE
Confidence 5679999999999999999999999999999999876554433222111 11357788999999998888876 5899
Q ss_pred EEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 115 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
+||+|+..... .. +.++..+++|+.++.++++++.+.. ...+||++||..
T Consensus 81 ViH~A~~~~~~---~~--~~~~~~~~~Nv~gt~~ll~aa~~~~------~~~r~v~~SS~~ 130 (351)
T PLN02650 81 VFHVATPMDFE---SK--DPENEVIKPTVNGMLSIMKACAKAK------TVRRIVFTSSAG 130 (351)
T ss_pred EEEeCCCCCCC---CC--CchhhhhhHHHHHHHHHHHHHHhcC------CceEEEEecchh
Confidence 99999854311 11 2235678999999999999875431 123899999874
No 233
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.58 E-value=3e-14 Score=111.09 Aligned_cols=125 Identities=14% Similarity=0.203 Sum_probs=92.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhc--CceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLAT--GIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
++|+++||||+|.||++++++|.++|++|.+++|+.+...... .+.... ..++.++.+|+++++.++++++ ++|
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d 78 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTE-HLLALDGAKERLHLFKANLLEEGSFDSVVD---GCE 78 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHH-HHHhccCCCCceEEEeccccCcchHHHHHc---CCC
Confidence 4689999999999999999999999999999998765432221 111111 2367889999999988888876 589
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
++||+|+..... . ..+ ....+++|+.++.++++++.... +..++|++||.+
T Consensus 79 ~Vih~A~~~~~~-~--~~~--~~~~~~~nv~gt~~ll~a~~~~~------~~~~~v~~SS~~ 129 (322)
T PLN02662 79 GVFHTASPFYHD-V--TDP--QAELIDPAVKGTLNVLRSCAKVP------SVKRVVVTSSMA 129 (322)
T ss_pred EEEEeCCcccCC-C--CCh--HHHHHHHHHHHHHHHHHHHHhCC------CCCEEEEccCHH
Confidence 999999864321 1 111 24678999999999999864321 123899999975
No 234
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=99.57 E-value=2.1e-13 Score=99.14 Aligned_cols=132 Identities=20% Similarity=0.311 Sum_probs=109.2
Q ss_pred CcCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh---
Q 030328 34 PIKDRHVFITGGS--SGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--- 108 (179)
Q Consensus 34 ~~~~k~vlItGa~--~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~--- 108 (179)
.++||++||+|-+ +.|+..+|+.|.++|+++..++.++ ++++..+++.+..+. ...++||+++.+++++++++
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s-~~v~~cDV~~d~~i~~~f~~i~~ 80 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGS-DLVLPCDVTNDESIDALFATIKK 80 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccC-CeEEecCCCCHHHHHHHHHHHHH
Confidence 5789999999865 8999999999999999999999887 455555556554444 45689999999999988865
Q ss_pred -hCCCcEEEecCCCCCC----CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEec
Q 030328 109 -AGPVDVLVVNQGVFVP----GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMS 172 (179)
Q Consensus 109 -~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~is 172 (179)
.+++|.++|+-+.... +.+.+++.|.|...+++...+...+.+++.|.|.+ +| +++.++
T Consensus 81 ~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~--gg---SiltLt 144 (259)
T COG0623 81 KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN--GG---SILTLT 144 (259)
T ss_pred hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC--CC---cEEEEE
Confidence 5899999999887653 45677999999999999999999999999999965 33 666665
No 235
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.57 E-value=3.8e-14 Score=106.94 Aligned_cols=120 Identities=24% Similarity=0.336 Sum_probs=94.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEe
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~ 117 (179)
+++||||++|.||++.+.+|.+.|++|+++|.-.....+..... ...++..|+.|.+.++++|++. ++|.+||
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~------~~~f~~gDi~D~~~L~~vf~~~-~idaViH 73 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL------QFKFYEGDLLDRALLTAVFEEN-KIDAVVH 73 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc------cCceEEeccccHHHHHHHHHhc-CCCEEEE
Confidence 47999999999999999999999999999998665443333221 1578899999999999999987 7999999
Q ss_pred cCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 118 NQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 118 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
.||....++ +.+...+.++.|+.|++.+++++.. .+ ...||+-||.+
T Consensus 74 FAa~~~VgE----Sv~~Pl~Yy~NNv~gTl~Ll~am~~----~g---v~~~vFSStAa 120 (329)
T COG1087 74 FAASISVGE----SVQNPLKYYDNNVVGTLNLIEAMLQ----TG---VKKFIFSSTAA 120 (329)
T ss_pred Cccccccch----hhhCHHHHHhhchHhHHHHHHHHHH----hC---CCEEEEecchh
Confidence 999765543 4466677899999999999987633 32 33677666543
No 236
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.55 E-value=1.7e-13 Score=107.51 Aligned_cols=125 Identities=23% Similarity=0.300 Sum_probs=90.5
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEec
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~~ 118 (179)
+++||||+|+||++++++|+++|++|++++|..+........+....+.++.++.+|++|.+.+.++++.. ++|++||+
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~vvh~ 80 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDH-AIDTVIHF 80 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcC-CCCEEEEC
Confidence 68999999999999999999999999998875433222222222222345667889999999998888754 69999999
Q ss_pred CCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 119 QGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 119 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
|+...... ..+.....+++|+.++..+++++ ++.+ ..++|++||..
T Consensus 81 a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~---~~~~v~~Ss~~ 126 (338)
T PRK10675 81 AGLKAVGE----SVQKPLEYYDNNVNGTLRLISAM----RAAN---VKNLIFSSSAT 126 (338)
T ss_pred Cccccccc----hhhCHHHHHHHHHHHHHHHHHHH----HHcC---CCEEEEeccHH
Confidence 98654322 12234457899999999988865 3322 23899999864
No 237
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.55 E-value=6.5e-15 Score=106.80 Aligned_cols=138 Identities=20% Similarity=0.263 Sum_probs=92.1
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCe--EEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHH----Hhh
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGAR--VSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTAL----DEA 109 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~----~~~ 109 (179)
..|++|+||+|+|||..++..+...+-. +++..|...+ .+.+....+........|++...-+.+++ ++.
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~----~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~ 80 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE----LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKG 80 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc----ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcC
Confidence 5689999999999998888887766533 2333332221 11111111222222334444444344433 335
Q ss_pred CCCcEEEecCCCCCCC---CcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcccC
Q 030328 110 GPVDVLVVNQGVFVPG---ELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQVG 179 (179)
Q Consensus 110 ~~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~g 179 (179)
++.|++|||||...+- ..+..+.++|++.++.|+++++.+.+.++|.+++++ -.+.+||+||.+...+
T Consensus 81 gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p--~~~~vVnvSS~aav~p 151 (253)
T KOG1204|consen 81 GKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSP--VNGNVVNVSSLAAVRP 151 (253)
T ss_pred CceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCC--ccCeEEEecchhhhcc
Confidence 7899999999987652 233678899999999999999999999999998874 1239999999887643
No 238
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.53 E-value=2.6e-13 Score=107.26 Aligned_cols=129 Identities=19% Similarity=0.165 Sum_probs=93.0
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHH----hhcCceEEEEEeeCCCHHHHHHHHHh
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQ----LATGIEVATYSADVRDFDAVKTALDE 108 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~v~~~~~D~~~~~~v~~~~~~ 108 (179)
..+++|+++||||+|.||.+++++|.++|++|++++|............. .....++.++.+|+.|.+.++++++
T Consensus 11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~- 89 (348)
T PRK15181 11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK- 89 (348)
T ss_pred ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-
Confidence 34577999999999999999999999999999999986543222111111 1111357788999999988888876
Q ss_pred hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 109 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
.+|++||.|+...... +.++....+++|+.|+.++++++. +.+ ..++|++||.+
T Consensus 90 --~~d~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~nll~~~~----~~~---~~~~v~~SS~~ 143 (348)
T PRK15181 90 --NVDYVLHQAALGSVPR----SLKDPIATNSANIDGFLNMLTAAR----DAH---VSSFTYAASSS 143 (348)
T ss_pred --CCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHHH----HcC---CCeEEEeechH
Confidence 5899999998644211 122334569999999999998762 221 33899999863
No 239
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.52 E-value=2.5e-13 Score=107.29 Aligned_cols=129 Identities=16% Similarity=0.216 Sum_probs=91.7
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChh--HHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEE
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGAR-VSILARSGE--KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~l 115 (179)
+++||||+|+||++++++|.++|.+ |+.+++... ..+... .+ ..+.++.++.+|++|.+++.+++++. .+|++
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~v 77 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DV--SDSERYVFEHADICDRAELDRIFAQH-QPDAV 77 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hc--ccCCceEEEEecCCCHHHHHHHHHhc-CCCEE
Confidence 6899999999999999999999977 555665321 122111 11 11345677899999999999998864 69999
Q ss_pred EecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCC--CCcEEEEecccC
Q 030328 116 VVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNG--GPASIALMSSQA 175 (179)
Q Consensus 116 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~~~~iv~iss~~ 175 (179)
||+|+...... +.+..+..+++|+.++..+++++.+.|.+...+ +..++|++||.+
T Consensus 78 ih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~ 135 (352)
T PRK10084 78 MHLAAESHVDR----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDE 135 (352)
T ss_pred EECCcccCCcc----hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchh
Confidence 99998654211 112345679999999999999998766433211 234899998853
No 240
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.51 E-value=3.8e-13 Score=102.47 Aligned_cols=127 Identities=21% Similarity=0.307 Sum_probs=99.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhc--CceEEEEEeeCCCHHHHHHHHHhhCCCcE
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLAT--GIEVATYSADVRDFDAVKTALDEAGPVDV 114 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~~~~id~ 114 (179)
.+++|||||+|.||+|.+.+|.++|+.|+++|.-.....+.....+... +..+.++..|++|.+.++++|+.. ++|.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-~fd~ 80 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-KFDA 80 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-CCce
Confidence 5789999999999999999999999999999975554433333333322 477999999999999999999988 5999
Q ss_pred EEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 115 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
|+|-|+....++. .+...+..+.|+.|++.+++.+ ++.+ ...+|+.||.+
T Consensus 81 V~Hfa~~~~vgeS----~~~p~~Y~~nNi~gtlnlLe~~----~~~~---~~~~V~sssat 130 (343)
T KOG1371|consen 81 VMHFAALAAVGES----MENPLSYYHNNIAGTLNLLEVM----KAHN---VKALVFSSSAT 130 (343)
T ss_pred EEeehhhhccchh----hhCchhheehhhhhHHHHHHHH----HHcC---CceEEEeccee
Confidence 9999987665543 2344778999999999988875 3333 34788877753
No 241
>PLN02427 UDP-apiose/xylose synthase
Probab=99.50 E-value=4.8e-13 Score=107.04 Aligned_cols=126 Identities=13% Similarity=0.155 Sum_probs=88.7
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKE-GARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
.+.++++||||+|.||++++++|.++ |++|++++|+.+..+............++.++.+|++|.+.+.++++ .+|
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~---~~d 88 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK---MAD 88 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh---cCC
Confidence 45568999999999999999999998 59999999876543322111000012357889999999998888776 479
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
+|||.|+...+..... + ....+..|+.++.++++++.. .+ .++|++||.+
T Consensus 89 ~ViHlAa~~~~~~~~~-~---~~~~~~~n~~gt~~ll~aa~~----~~----~r~v~~SS~~ 138 (386)
T PLN02427 89 LTINLAAICTPADYNT-R---PLDTIYSNFIDALPVVKYCSE----NN----KRLIHFSTCE 138 (386)
T ss_pred EEEEcccccChhhhhh-C---hHHHHHHHHHHHHHHHHHHHh----cC----CEEEEEeeee
Confidence 9999998654322211 1 123466799999998887622 21 3899999863
No 242
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.46 E-value=1.1e-12 Score=105.19 Aligned_cols=125 Identities=22% Similarity=0.268 Sum_probs=90.0
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHH--HHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhC-C
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEE--AKQSIQLATGIEVATYSADVRDFDAVKTALDEAG-P 111 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~--~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~-~ 111 (179)
..+++++||||+|.||++++++|.++|++|++++|+....+. ..++... ....+..+.+|++|.++++++++..+ +
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~-~~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKK-ELPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhh-hcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 357799999999999999999999999999999998754321 1111111 12357788999999999999988654 6
Q ss_pred CcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 112 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
+|++||+++..... ..+ .+++|+.++..+++++ ++.+ ..++|++||.+.
T Consensus 137 ~D~Vi~~aa~~~~~-----~~~----~~~vn~~~~~~ll~aa----~~~g---v~r~V~iSS~~v 185 (390)
T PLN02657 137 VDVVVSCLASRTGG-----VKD----SWKIDYQATKNSLDAG----REVG---AKHFVLLSAICV 185 (390)
T ss_pred CcEEEECCccCCCC-----Ccc----chhhHHHHHHHHHHHH----HHcC---CCEEEEEeeccc
Confidence 99999998743211 112 2466777887777765 2222 348999998753
No 243
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.46 E-value=6e-13 Score=102.16 Aligned_cols=118 Identities=24% Similarity=0.232 Sum_probs=89.5
Q ss_pred EEEcCCCchHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEec
Q 030328 41 FITGGSSGIGLALAHQAAKEG--ARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (179)
Q Consensus 41 lItGa~~~iG~~la~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~~ 118 (179)
|||||+|.+|++++++|.++| ++|.+.++++...... .... .....++.+|++|.++++++++ +.|++||.
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~--~~~~--~~~~~~~~~Di~d~~~l~~a~~---g~d~V~H~ 73 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK--DLQK--SGVKEYIQGDITDPESLEEALE---GVDVVFHT 73 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch--hhhc--ccceeEEEeccccHHHHHHHhc---CCceEEEe
Confidence 699999999999999999999 7888888876532211 1111 1223388999999999999887 58999999
Q ss_pred CCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 119 QGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 119 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
|+...... ....+.++++|+.|+-++++++.. . +..++|++||.+..
T Consensus 74 Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa~~----~---~VkrlVytSS~~vv 120 (280)
T PF01073_consen 74 AAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAARK----A---GVKRLVYTSSISVV 120 (280)
T ss_pred CccccccC-----cccHHHHHHHHHHHHHHHHHHHHH----c---CCCEEEEEcCccee
Confidence 99654322 344567899999999999998743 1 24599999998653
No 244
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.45 E-value=1.5e-12 Score=100.99 Aligned_cols=123 Identities=18% Similarity=0.232 Sum_probs=88.6
Q ss_pred EEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChh-HHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEE
Q 030328 39 HVFITGGSSGIGLALAHQAAKEG--ARVSILARSGE-KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g--~~v~~~~r~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~l 115 (179)
+++||||+|+||++++++|+++| .+|++.+|... ...+..+.+. ....+.++.+|+++++++.++++.. ++|++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~v 77 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE--DNPRYRFVKGDIGDRELVSRLFTEH-QPDAV 77 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc--cCCCcEEEEcCCcCHHHHHHHHhhc-CCCEE
Confidence 48999999999999999999987 78888876421 1111111221 1235677889999999999988865 58999
Q ss_pred EecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEeccc
Q 030328 116 VVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (179)
Q Consensus 116 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~ 174 (179)
||+|+..... .+.+.++..+++|+.++..+++++...+. ..+++++||.
T Consensus 78 i~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~~i~~Ss~ 126 (317)
T TIGR01181 78 VHFAAESHVD----RSISGPAAFIETNVVGTYTLLEAVRKYWH------EFRFHHISTD 126 (317)
T ss_pred EEcccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhcCC------CceEEEeecc
Confidence 9999865421 22344567799999999999987744321 1279999885
No 245
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.43 E-value=1e-12 Score=102.52 Aligned_cols=116 Identities=22% Similarity=0.300 Sum_probs=88.6
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEe
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~ 117 (179)
++++||||+|+||++++++|.++|++|++++|+++..... ....+..+.+|+++.+++.++++ .+|++||
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~D~~~~~~l~~~~~---~~d~vi~ 70 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL-------EGLDVEIVEGDLRDPASLRKAVA---GCRALFH 70 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc-------ccCCceEEEeeCCCHHHHHHHHh---CCCEEEE
Confidence 4699999999999999999999999999999986543211 12246788999999998888776 5899999
Q ss_pred cCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 118 NQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 118 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
+|+.... ..++++..+++|+.++..+++++.. .+ ..++|++||.+.
T Consensus 71 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~---~~~~v~~SS~~~ 116 (328)
T TIGR03466 71 VAADYRL------WAPDPEEMYAANVEGTRNLLRAALE----AG---VERVVYTSSVAT 116 (328)
T ss_pred eceeccc------CCCCHHHHHHHHHHHHHHHHHHHHH----hC---CCeEEEEechhh
Confidence 9975321 1123456789999999999887632 22 238999998643
No 246
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.43 E-value=2.5e-12 Score=100.06 Aligned_cols=123 Identities=21% Similarity=0.303 Sum_probs=88.8
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEec
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~~ 118 (179)
+++||||+|.||++++++|.++|++|+++++......+...+... ...+..+.+|+++.++++++++. +++|++||+
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~-~~~d~vv~~ 77 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER--ITRVTFVEGDLRDRELLDRLFEE-HKIDAVIHF 77 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc--ccceEEEECCCCCHHHHHHHHHh-CCCcEEEEC
Confidence 479999999999999999999999999887654332222222211 11467788999999999998875 379999999
Q ss_pred CCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 119 QGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 119 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
||.....+ +.++....++.|+.++..+++++. +.+ ..+++++||..
T Consensus 78 ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~---~~~~v~~ss~~ 123 (328)
T TIGR01179 78 AGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAMQ----QTG---VKKFIFSSSAA 123 (328)
T ss_pred ccccCcch----hhcCchhhhhhhHHHHHHHHHHHH----hcC---CCEEEEecchh
Confidence 99654322 223345678899999999988752 222 23888888753
No 247
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=99.43 E-value=1.1e-11 Score=97.76 Aligned_cols=86 Identities=22% Similarity=0.230 Sum_probs=66.2
Q ss_pred CCcEEEEEcCCCchHHH--HHHHHHHcCCeEEEEecChhHHH------------HHHHHHHhhcCceEEEEEeeCCCHHH
Q 030328 36 KDRHVFITGGSSGIGLA--LAHQAAKEGARVSILARSGEKLE------------EAKQSIQLATGIEVATYSADVRDFDA 101 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~--la~~l~~~g~~v~~~~r~~~~~~------------~~~~~~~~~~~~~v~~~~~D~~~~~~ 101 (179)
-+|++||||+++|+|.+ +|+.| +.|++++++++..+..+ ...+.+ ...+..+..+.+|+++.++
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a-~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFA-KAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHH-HhcCCceEEEEcCCCCHHH
Confidence 47999999999999999 89999 99999888885432211 222223 2335667788999999999
Q ss_pred HHHHHHh----hCCCcEEEecCCCCC
Q 030328 102 VKTALDE----AGPVDVLVVNQGVFV 123 (179)
Q Consensus 102 v~~~~~~----~~~id~li~~ag~~~ 123 (179)
+++++++ +|++|+||||+|...
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~~ 143 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASPR 143 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccCC
Confidence 8877655 589999999998763
No 248
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.42 E-value=7.2e-13 Score=99.54 Aligned_cols=100 Identities=28% Similarity=0.315 Sum_probs=81.6
Q ss_pred HHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh-CCCcEEEecCCCCCCCCcccCC
Q 030328 53 LAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-GPVDVLVVNQGVFVPGELEVQS 131 (179)
Q Consensus 53 la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~-~~id~li~~ag~~~~~~~~~~~ 131 (179)
+|++|+++|++|++++|++++.+ . ..++.+|+++.+++++++++. +++|++|||||....
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~-------~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~------- 61 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----L-------DGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGT------- 61 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----h-------hHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC-------
Confidence 47899999999999999876532 1 134689999999999998875 679999999996421
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 132 LDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 132 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
+.++..+++|+.+++.+++.++|.|.+. ++||++||.++.
T Consensus 62 -~~~~~~~~vN~~~~~~l~~~~~~~~~~~-----g~Iv~isS~~~~ 101 (241)
T PRK12428 62 -APVELVARVNFLGLRHLTEALLPRMAPG-----GAIVNVASLAGA 101 (241)
T ss_pred -CCHHHhhhhchHHHHHHHHHHHHhccCC-----cEEEEeCcHHhh
Confidence 3478899999999999999999998532 399999998764
No 249
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.42 E-value=6.5e-12 Score=94.90 Aligned_cols=120 Identities=20% Similarity=0.262 Sum_probs=84.7
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCH-HHHHHHHHhhCCC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDF-DAVKTALDEAGPV 112 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~~~~i 112 (179)
+..+++++||||+|++|++++++|+++|++|+++.|++++.+.... .+..+.++.+|+++. +.+.+.+. .++
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-----~~~~~~~~~~Dl~d~~~~l~~~~~--~~~ 86 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP-----QDPSLQIVRADVTEGSDKLVEAIG--DDS 86 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc-----cCCceEEEEeeCCCCHHHHHHHhh--cCC
Confidence 4567899999999999999999999999999999998765432211 123577889999983 43333331 369
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
|++|+++|...... . ...+++|..++..+++++ .+.+ ..+||++||..
T Consensus 87 d~vi~~~g~~~~~~----~----~~~~~~n~~~~~~ll~a~----~~~~---~~~iV~iSS~~ 134 (251)
T PLN00141 87 DAVICATGFRRSFD----P----FAPWKVDNFGTVNLVEAC----RKAG---VTRFILVSSIL 134 (251)
T ss_pred CEEEECCCCCcCCC----C----CCceeeehHHHHHHHHHH----HHcC---CCEEEEEcccc
Confidence 99999988642111 0 112467888888888875 2222 24899999975
No 250
>PLN02686 cinnamoyl-CoA reductase
Probab=99.42 E-value=8.3e-12 Score=99.40 Aligned_cols=128 Identities=20% Similarity=0.250 Sum_probs=91.2
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhh-----cCceEEEEEeeCCCHHHHHHHHHh
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLA-----TGIEVATYSADVRDFDAVKTALDE 108 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-----~~~~v~~~~~D~~~~~~v~~~~~~ 108 (179)
..++|+++||||+|+||++++++|+++|++|+++.|+.+..+.. +++... ....+.++.+|++|.++++++++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~- 127 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD- 127 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH-
Confidence 35789999999999999999999999999999888886654433 222110 01246788999999999988887
Q ss_pred hCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 109 AGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 109 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
.+|.++|.|+...+..... ..+...++|+.++..+++++.. . .+..++|++||.+
T Consensus 128 --~~d~V~hlA~~~~~~~~~~----~~~~~~~~nv~gt~~llea~~~----~--~~v~r~V~~SS~~ 182 (367)
T PLN02686 128 --GCAGVFHTSAFVDPAGLSG----YTKSMAELEAKASENVIEACVR----T--ESVRKCVFTSSLL 182 (367)
T ss_pred --hccEEEecCeeeccccccc----ccchhhhhhHHHHHHHHHHHHh----c--CCccEEEEeccHH
Confidence 4789999888654322111 1123457789999888887622 1 1234899999863
No 251
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.37 E-value=9.3e-12 Score=92.65 Aligned_cols=117 Identities=25% Similarity=0.362 Sum_probs=90.6
Q ss_pred EEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEecC
Q 030328 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQ 119 (179)
Q Consensus 40 vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~~a 119 (179)
|+||||+|.+|.+++++|.++|..|+.+.|+.........+ .++.++.+|+.+.+.++++++.. .+|.+||.|
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~------~~~~~~~~dl~~~~~~~~~~~~~-~~d~vi~~a 73 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK------LNVEFVIGDLTDKEQLEKLLEKA-NIDVVIHLA 73 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH------TTEEEEESETTSHHHHHHHHHHH-TESEEEEEB
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc------ceEEEEEeecccccccccccccc-CceEEEEee
Confidence 79999999999999999999999998888876643322211 16788999999999999999887 799999999
Q ss_pred CCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEeccc
Q 030328 120 GVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (179)
Q Consensus 120 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~ 174 (179)
+.... ..+.+.....++.|+.++..+++.+.. .+. .+++++||.
T Consensus 74 ~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~---~~~i~~sS~ 117 (236)
T PF01370_consen 74 AFSSN----PESFEDPEEIIEANVQGTRNLLEAARE----AGV---KRFIFLSSA 117 (236)
T ss_dssp SSSSH----HHHHHSHHHHHHHHHHHHHHHHHHHHH----HTT---SEEEEEEEG
T ss_pred ccccc----ccccccccccccccccccccccccccc----ccc---ccccccccc
Confidence 86431 112245567788999999888887633 222 489999985
No 252
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.37 E-value=1.3e-11 Score=105.22 Aligned_cols=127 Identities=15% Similarity=0.185 Sum_probs=90.3
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChh--HHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKE--GARVSILARSGE--KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAG 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~--g~~v~~~~r~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~ 110 (179)
.++|+||||||+|.||++++++|.++ |++|+++++... ...... .......+.++.+|++|.+.+++.+...
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~---~~~~~~~v~~~~~Dl~d~~~~~~~~~~~- 79 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLN---PSKSSPNFKFVKGDIASADLVNYLLITE- 79 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhh---hcccCCCeEEEECCCCChHHHHHHHhhc-
Confidence 46789999999999999999999998 688998887531 111111 1111345788899999998887766443
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
++|++||+|+...... ..++....+++|+.++..+++++.. . +...++|++||..
T Consensus 80 ~~D~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~--~~vkr~I~~SS~~ 134 (668)
T PLN02260 80 GIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKV----T--GQIRRFIHVSTDE 134 (668)
T ss_pred CCCEEEECCCccCchh----hhhCHHHHHHHHHHHHHHHHHHHHh----c--CCCcEEEEEcchH
Confidence 6999999999654321 1222345679999999999887622 1 2234899999863
No 253
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.36 E-value=2.1e-11 Score=96.29 Aligned_cols=117 Identities=12% Similarity=0.232 Sum_probs=85.0
Q ss_pred cEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCC-CHHHHHHHHHhhCCCcEE
Q 030328 38 RHVFITGGSSGIGLALAHQAAKE-GARVSILARSGEKLEEAKQSIQLATGIEVATYSADVR-DFDAVKTALDEAGPVDVL 115 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~v~~~~~~~~~id~l 115 (179)
++++||||+|.||++++++|.+. |++|++++|+.+.... +. ....+.++.+|+. +.+.++++++ ++|++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~--~~~~~~~~~~Dl~~~~~~~~~~~~---~~d~V 72 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LV--NHPRMHFFEGDITINKEWIEYHVK---KCDVI 72 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hc--cCCCeEEEeCCCCCCHHHHHHHHc---CCCEE
Confidence 57999999999999999999986 6999999987643221 11 1234778899997 6666666655 58999
Q ss_pred EecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 116 VVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 116 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
||.|+...+... .++.+..+++|+.++.++++++.. .+ .++|++||..
T Consensus 73 iH~aa~~~~~~~----~~~p~~~~~~n~~~~~~ll~aa~~----~~----~~~v~~SS~~ 120 (347)
T PRK11908 73 LPLVAIATPATY----VKQPLRVFELDFEANLPIVRSAVK----YG----KHLVFPSTSE 120 (347)
T ss_pred EECcccCChHHh----hcCcHHHHHHHHHHHHHHHHHHHh----cC----CeEEEEecce
Confidence 999986543221 123345689999999998887632 22 3899999863
No 254
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.34 E-value=1.6e-11 Score=95.81 Aligned_cols=110 Identities=15% Similarity=0.187 Sum_probs=81.9
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEec
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~~ 118 (179)
+++||||+|.+|++++++|.++|++|.+++|+.+.... +. ...+.++.+|++|++++.+.++ ++|++||.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~---~~~v~~v~~Dl~d~~~l~~al~---g~d~Vi~~ 71 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LK---EWGAELVYGDLSLPETLPPSFK---GVTAIIDA 71 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hh---hcCCEEEECCCCCHHHHHHHHC---CCCEEEEC
Confidence 69999999999999999999999999999998654321 11 1246778999999998888776 58999998
Q ss_pred CCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEeccc
Q 030328 119 QGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (179)
Q Consensus 119 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~ 174 (179)
++.... + .....++|..++.++.+++.. .+ ..++|++||.
T Consensus 72 ~~~~~~------~---~~~~~~~~~~~~~~l~~aa~~----~g---vkr~I~~Ss~ 111 (317)
T CHL00194 72 STSRPS------D---LYNAKQIDWDGKLALIEAAKA----AK---IKRFIFFSIL 111 (317)
T ss_pred CCCCCC------C---ccchhhhhHHHHHHHHHHHHH----cC---CCEEEEeccc
Confidence 763211 1 122456788888888877622 22 3489999985
No 255
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.33 E-value=1.9e-11 Score=94.68 Aligned_cols=105 Identities=19% Similarity=0.205 Sum_probs=80.5
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEe
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~ 117 (179)
+++|||||+|.||++++++|.++| +|++++|... .+..|++|.+.+++++++. ++|++||
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------------~~~~Dl~d~~~~~~~~~~~-~~D~Vih 60 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------------DYCGDFSNPEGVAETVRKI-RPDVIVN 60 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------------cccCCCCCHHHHHHHHHhc-CCCEEEE
Confidence 369999999999999999999999 8888887531 1347999999999988865 5899999
Q ss_pred cCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEeccc
Q 030328 118 NQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (179)
Q Consensus 118 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~ 174 (179)
+|+....... .++.+..+++|+.++..+++++.. . + .++|.+||.
T Consensus 61 ~Aa~~~~~~~----~~~~~~~~~~N~~~~~~l~~aa~~----~--g--~~~v~~Ss~ 105 (299)
T PRK09987 61 AAAHTAVDKA----ESEPEFAQLLNATSVEAIAKAANE----V--G--AWVVHYSTD 105 (299)
T ss_pred CCccCCcchh----hcCHHHHHHHHHHHHHHHHHHHHH----c--C--CeEEEEccc
Confidence 9987553221 122345678999999999988732 2 1 278888885
No 256
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.30 E-value=4e-11 Score=102.14 Aligned_cols=120 Identities=13% Similarity=0.167 Sum_probs=87.0
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHH-HHHHHHhhCCC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKE-GARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDA-VKTALDEAGPV 112 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-v~~~~~~~~~i 112 (179)
-++++++||||+|.||++++++|.++ |++|++++|....... .. ....+.++.+|++|.++ +++.++ ++
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~--~~~~~~~~~gDl~d~~~~l~~~l~---~~ 383 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FL--GHPRFHFVEGDISIHSEWIEYHIK---KC 383 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hc--CCCceEEEeccccCcHHHHHHHhc---CC
Confidence 36889999999999999999999985 7999999997643221 11 12357778899998654 455554 68
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
|++||.|+...+.... +..+..+++|+.++..+++++.. .+ .++|++||.+
T Consensus 384 D~ViHlAa~~~~~~~~----~~~~~~~~~Nv~~t~~ll~a~~~----~~----~~~V~~SS~~ 434 (660)
T PRK08125 384 DVVLPLVAIATPIEYT----RNPLRVFELDFEENLKIIRYCVK----YN----KRIIFPSTSE 434 (660)
T ss_pred CEEEECccccCchhhc----cCHHHHHHhhHHHHHHHHHHHHh----cC----CeEEEEcchh
Confidence 9999999865532211 22344689999999999988742 21 3899999863
No 257
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.28 E-value=4.2e-11 Score=92.77 Aligned_cols=117 Identities=22% Similarity=0.269 Sum_probs=85.8
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEec
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~~ 118 (179)
.+||||++|.||++++++|.++|++|..++|......... ..+..+.+|+++.+...+..+... |.+||.
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~--d~vih~ 71 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--------SGVEFVVLDLTDRDLVDELAKGVP--DAVIHL 71 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--------cccceeeecccchHHHHHHHhcCC--CEEEEc
Confidence 3999999999999999999999999999999766433211 346678889998866666665332 999999
Q ss_pred CCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 119 QGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 119 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
|+........ .. .....+++|+.++.++++++.. .+..++++.||.+
T Consensus 72 aa~~~~~~~~--~~-~~~~~~~~nv~gt~~ll~aa~~-------~~~~~~v~~ss~~ 118 (314)
T COG0451 72 AAQSSVPDSN--AS-DPAEFLDVNVDGTLNLLEAARA-------AGVKRFVFASSVS 118 (314)
T ss_pred cccCchhhhh--hh-CHHHHHHHHHHHHHHHHHHHHH-------cCCCeEEEeCCCc
Confidence 9976543211 11 3455799999999999998733 1234888866644
No 258
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.27 E-value=1.5e-10 Score=92.26 Aligned_cols=120 Identities=16% Similarity=0.064 Sum_probs=85.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEE
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~l 115 (179)
.+|+++||||+|.||++++++|.++|++|++++|...... . . ......++.+|+++.+.+.+.++ ++|++
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~---~---~-~~~~~~~~~~Dl~d~~~~~~~~~---~~D~V 89 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM---S---E-DMFCHEFHLVDLRVMENCLKVTK---GVDHV 89 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc---c---c-ccccceEEECCCCCHHHHHHHHh---CCCEE
Confidence 6789999999999999999999999999999998643211 0 0 01124567889999888777665 58999
Q ss_pred EecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 116 VVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 116 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
||.|+......... +.....++.|+.++.++++++.. .+ ..++|++||..
T Consensus 90 ih~Aa~~~~~~~~~---~~~~~~~~~N~~~t~nll~aa~~----~~---vk~~V~~SS~~ 139 (370)
T PLN02695 90 FNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAARI----NG---VKRFFYASSAC 139 (370)
T ss_pred EEcccccCCccccc---cCchhhHHHHHHHHHHHHHHHHH----hC---CCEEEEeCchh
Confidence 99998543222111 11234567899999999887632 22 33899999863
No 259
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.26 E-value=8.5e-11 Score=92.73 Aligned_cols=121 Identities=16% Similarity=0.209 Sum_probs=83.3
Q ss_pred EEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChhHH---HHHHHHHHhh------cC-ceEEEEEeeCCCH------H
Q 030328 39 HVFITGGSSGIGLALAHQAAKEG--ARVSILARSGEKL---EEAKQSIQLA------TG-IEVATYSADVRDF------D 100 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g--~~v~~~~r~~~~~---~~~~~~~~~~------~~-~~v~~~~~D~~~~------~ 100 (179)
+++||||+|++|++++++|+++| ++|+++.|+.+.. +...+.+... .. .++..+.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 48999999999999999999999 7799999976532 2222222111 01 4688889998864 2
Q ss_pred HHHHHHHhhCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 101 AVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 101 ~v~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
...++. ..+|++||+|+..... ..++...+.|+.++..+++.+.. .+ ...++++||.+.
T Consensus 81 ~~~~~~---~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a~~----~~---~~~~v~iSS~~v 139 (367)
T TIGR01746 81 EWERLA---ENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLAAS----GR---AKPLHYVSTISV 139 (367)
T ss_pred HHHHHH---hhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHHhh----CC---CceEEEEccccc
Confidence 333333 4699999999864321 12355678999999998887633 11 236999998754
No 260
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.26 E-value=2.7e-10 Score=81.86 Aligned_cols=100 Identities=29% Similarity=0.354 Sum_probs=78.3
Q ss_pred EEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEecC
Q 030328 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQ 119 (179)
Q Consensus 40 vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~~a 119 (179)
|+|+||+|.+|+.++++|.++|++|+++.|++++.++ ...+..+.+|+.|++++.+.++ +.|++|+++
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---------~~~~~~~~~d~~d~~~~~~al~---~~d~vi~~~ 68 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---------SPGVEIIQGDLFDPDSVKAALK---GADAVIHAA 68 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---------CTTEEEEESCTTCHHHHHHHHT---TSSEEEECC
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---------ccccccceeeehhhhhhhhhhh---hcchhhhhh
Confidence 6899999999999999999999999999999886654 3568889999999988888877 689999999
Q ss_pred CCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 120 GVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 120 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
|.... + ...++.++..+++.+ ..+++.+|+..
T Consensus 69 ~~~~~--------~-------------~~~~~~~~~a~~~~~---~~~~v~~s~~~ 100 (183)
T PF13460_consen 69 GPPPK--------D-------------VDAAKNIIEAAKKAG---VKRVVYLSSAG 100 (183)
T ss_dssp HSTTT--------H-------------HHHHHHHHHHHHHTT---SSEEEEEEETT
T ss_pred hhhcc--------c-------------ccccccccccccccc---cccceeeeccc
Confidence 75332 1 222344444555544 33899998865
No 261
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.26 E-value=8.8e-11 Score=90.14 Aligned_cols=102 Identities=23% Similarity=0.278 Sum_probs=80.2
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEec
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~~ 118 (179)
+++||||+|.||++++++|.++|++|++++|+ .+|+.+.+++++.++.. .+|++||+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------------~~d~~~~~~~~~~~~~~-~~d~vi~~ 57 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------------QLDLTDPEALERLLRAI-RPDAVVNT 57 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------------ccCCCCHHHHHHHHHhC-CCCEEEEC
Confidence 37999999999999999999999999998884 36999999999888764 58999999
Q ss_pred CCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 119 QGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 119 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
|+...... ..+..+..+++|+.++..+++++.. .+ .++|++||.+
T Consensus 58 a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~----~~~v~~Ss~~ 102 (287)
T TIGR01214 58 AAYTDVDG----AESDPEKAFAVNALAPQNLARAAAR----HG----ARLVHISTDY 102 (287)
T ss_pred Cccccccc----cccCHHHHHHHHHHHHHHHHHHHHH----cC----CeEEEEeeee
Confidence 98653221 1123456789999999999888632 21 2789998853
No 262
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.24 E-value=1.1e-10 Score=88.29 Aligned_cols=123 Identities=20% Similarity=0.251 Sum_probs=91.2
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChh--HHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGE--KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~--~v~~~~r~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
+++||||++|.||+++++.+.++.. +|+.+|.-.- ..+.. +.+. ...+..++++|+.|.+.+.++++++ .+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~~--~~~~~~fv~~DI~D~~~v~~~~~~~-~~D 76 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADVE--DSPRYRFVQGDICDRELVDRLFKEY-QPD 76 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-Hhhh--cCCCceEEeccccCHHHHHHHHHhc-CCC
Confidence 4789999999999999999998764 4677776321 12222 2221 2457889999999999999999987 699
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEeccc
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~ 174 (179)
+++|-|+-.|.. .+-++.+.-+++|+.|++.+++++..++.+ .+++.||+-
T Consensus 77 ~VvhfAAESHVD----RSI~~P~~Fi~TNv~GT~~LLEaar~~~~~------frf~HISTD 127 (340)
T COG1088 77 AVVHFAAESHVD----RSIDGPAPFIQTNVVGTYTLLEAARKYWGK------FRFHHISTD 127 (340)
T ss_pred eEEEechhcccc----ccccChhhhhhcchHHHHHHHHHHHHhccc------ceEEEeccc
Confidence 999999876632 233333445999999999999998665432 378888864
No 263
>PRK05865 hypothetical protein; Provisional
Probab=99.22 E-value=2.6e-10 Score=98.45 Aligned_cols=104 Identities=26% Similarity=0.265 Sum_probs=81.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEe
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~ 117 (179)
++++||||+|.||++++++|.++|++|++++|+.+.. . ...+.++.+|++|.+++.++++ ++|++||
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~----~~~v~~v~gDL~D~~~l~~al~---~vD~VVH 67 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W----PSSADFIAADIRDATAVESAMT---GADVVAH 67 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c----ccCceEEEeeCCCHHHHHHHHh---CCCEEEE
Confidence 3699999999999999999999999999999975321 1 1246778999999999988886 5899999
Q ss_pred cCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEeccc
Q 030328 118 NQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (179)
Q Consensus 118 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~ 174 (179)
+|+...+ .+++|+.++.++++++ .+.+ ..++|++||.
T Consensus 68 lAa~~~~-------------~~~vNv~GT~nLLeAa----~~~g---vkr~V~iSS~ 104 (854)
T PRK05865 68 CAWVRGR-------------NDHINIDGTANVLKAM----AETG---TGRIVFTSSG 104 (854)
T ss_pred CCCcccc-------------hHHHHHHHHHHHHHHH----HHcC---CCeEEEECCc
Confidence 9975321 3678999998877664 3332 2389999985
No 264
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.21 E-value=2.1e-10 Score=89.00 Aligned_cols=114 Identities=13% Similarity=0.150 Sum_probs=80.6
Q ss_pred EEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh-hCCCcEEEe
Q 030328 40 VFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-AGPVDVLVV 117 (179)
Q Consensus 40 vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~-~~~id~li~ 117 (179)
+|||||+|.||.+++++|.++|+ .|++++|+.+.. .. .++ . ...+..|+++.+.++.+.+. ..++|++||
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~----~--~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh 72 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNL----A--DLVIADYIDKEDFLDRLEKGAFGKIEAIFH 72 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhh----h--heeeeccCcchhHHHHHHhhccCCCCEEEE
Confidence 58999999999999999999998 688887754321 11 111 1 12356678887777666552 357999999
Q ss_pred cCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 118 NQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 118 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
+|+.... +.++.+..+++|+.++..+++++.. .+ .++|++||..
T Consensus 73 ~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~~----~~----~~~v~~SS~~ 116 (314)
T TIGR02197 73 QGACSDT------TETDGEYMMENNYQYSKRLLDWCAE----KG----IPFIYASSAA 116 (314)
T ss_pred CccccCc------cccchHHHHHHHHHHHHHHHHHHHH----hC----CcEEEEccHH
Confidence 9986432 2234566789999999999987632 21 2799999854
No 265
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.20 E-value=2.6e-10 Score=92.86 Aligned_cols=118 Identities=21% Similarity=0.180 Sum_probs=81.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEE
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~l 115 (179)
++++++||||+|.||++++++|.++|++|+++++......+..... ....++..+..|+.+.. ++ ++|+|
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~--~~~~~~~~i~~D~~~~~-----l~---~~D~V 187 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHH--FSNPNFELIRHDVVEPI-----LL---EVDQI 187 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhh--ccCCceEEEECCccChh-----hc---CCCEE
Confidence 5689999999999999999999999999999987533211111111 11234667778876542 22 58999
Q ss_pred EecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 116 VVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 116 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
||.|+...+.... ++....+++|+.++.++++++.. . + .++|++||..
T Consensus 188 iHlAa~~~~~~~~----~~p~~~~~~Nv~gt~nLleaa~~----~--g--~r~V~~SS~~ 235 (442)
T PLN02206 188 YHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----V--G--ARFLLTSTSE 235 (442)
T ss_pred EEeeeecchhhhh----cCHHHHHHHHHHHHHHHHHHHHH----h--C--CEEEEECChH
Confidence 9999865432211 12356789999999999988732 2 1 2799999864
No 266
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.19 E-value=6.6e-11 Score=91.22 Aligned_cols=103 Identities=23% Similarity=0.242 Sum_probs=76.6
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEe
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~ 117 (179)
+++|||||+|.+|.++.+.|.++|++++.++|+ ..|++|.+.+.+++++. ++|++||
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------------~~dl~d~~~~~~~~~~~-~pd~Vin 57 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS----------------------DLDLTDPEAVAKLLEAF-KPDVVIN 57 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------------CS-TTSHHHHHHHHHHH---SEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------------hcCCCCHHHHHHHHHHh-CCCeEec
Confidence 479999999999999999999999999998776 47999999999999887 5899999
Q ss_pred cCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 118 NQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 118 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
+|+...... -.++.+..+.+|+.++..+.+.+.. . ..++|++||..
T Consensus 58 ~aa~~~~~~----ce~~p~~a~~iN~~~~~~la~~~~~----~----~~~li~~STd~ 103 (286)
T PF04321_consen 58 CAAYTNVDA----CEKNPEEAYAINVDATKNLAEACKE----R----GARLIHISTDY 103 (286)
T ss_dssp ------HHH----HHHSHHHHHHHHTHHHHHHHHHHHH----C----T-EEEEEEEGG
T ss_pred cceeecHHh----hhhChhhhHHHhhHHHHHHHHHHHH----c----CCcEEEeeccE
Confidence 998653211 1233556799999999999988732 2 23999999863
No 267
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.17 E-value=3.3e-10 Score=87.95 Aligned_cols=111 Identities=18% Similarity=0.225 Sum_probs=71.4
Q ss_pred EEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh------hCCCc
Q 030328 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE------AGPVD 113 (179)
Q Consensus 40 vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~------~~~id 113 (179)
++||||+|.||++++++|.++|++++++.++.+..... .. ...+|+.|..+.+.++++ ++++|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~~----------~~~~~~~d~~~~~~~~~~~~~~~~~~~~d 70 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VN----------LVDLDIADYMDKEDFLAQIMAGDDFGDIE 70 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-Hh----------hhhhhhhhhhhHHHHHHHHhcccccCCcc
Confidence 79999999999999999999999766655443321110 00 112355554443333322 24799
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
++||.|+...... .++ +..++.|+.++..+++++. +.+ .++|++||.+
T Consensus 71 ~Vih~A~~~~~~~---~~~---~~~~~~n~~~t~~ll~~~~----~~~----~~~i~~SS~~ 118 (308)
T PRK11150 71 AIFHEGACSSTTE---WDG---KYMMDNNYQYSKELLHYCL----ERE----IPFLYASSAA 118 (308)
T ss_pred EEEECceecCCcC---CCh---HHHHHHHHHHHHHHHHHHH----HcC----CcEEEEcchH
Confidence 9999998543321 122 3468999999999888863 222 2689999864
No 268
>PLN02996 fatty acyl-CoA reductase
Probab=99.15 E-value=6.3e-10 Score=91.73 Aligned_cols=127 Identities=9% Similarity=0.175 Sum_probs=86.5
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCC---eEEEEecChhH---HHHHHHHH---------Hhhc--------CceE
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA---RVSILARSGEK---LEEAKQSI---------QLAT--------GIEV 89 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~---~v~~~~r~~~~---~~~~~~~~---------~~~~--------~~~v 89 (179)
..+++|+++||||+|.+|++++.+|++.+. +|++..|.... .+....++ .... ..++
T Consensus 7 ~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv 86 (491)
T PLN02996 7 QFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKV 86 (491)
T ss_pred HHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCE
Confidence 346899999999999999999999997653 57888886531 11111111 0000 1468
Q ss_pred EEEEeeCCC-------HHHHHHHHHhhCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccC
Q 030328 90 ATYSADVRD-------FDAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQN 162 (179)
Q Consensus 90 ~~~~~D~~~-------~~~v~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 162 (179)
.++.+|+++ .+.++++++ .+|++||+|+..... +..+..+++|+.|+..+++.+...
T Consensus 87 ~~i~GDl~~~~LGLs~~~~~~~l~~---~vD~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~------ 150 (491)
T PLN02996 87 TPVPGDISYDDLGVKDSNLREEMWK---EIDIVVNLAATTNFD-------ERYDVALGINTLGALNVLNFAKKC------ 150 (491)
T ss_pred EEEecccCCcCCCCChHHHHHHHHh---CCCEEEECccccCCc-------CCHHHHHHHHHHHHHHHHHHHHhc------
Confidence 899999984 344555554 589999999865421 234567899999999998876321
Q ss_pred CCCcEEEEecccC
Q 030328 163 GGPASIALMSSQA 175 (179)
Q Consensus 163 ~~~~~iv~iss~~ 175 (179)
+...+++.+||..
T Consensus 151 ~~~k~~V~vST~~ 163 (491)
T PLN02996 151 VKVKMLLHVSTAY 163 (491)
T ss_pred CCCCeEEEEeeeE
Confidence 1133788888864
No 269
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.15 E-value=3.3e-10 Score=87.64 Aligned_cols=102 Identities=14% Similarity=0.130 Sum_probs=76.1
Q ss_pred EEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEecCC
Q 030328 41 FITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQG 120 (179)
Q Consensus 41 lItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~~ag 120 (179)
|||||+|.||+++++.|.++|++|+++.++ ..+|+++.++++++++.. ++|++||+|+
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------------~~~Dl~~~~~l~~~~~~~-~~d~Vih~A~ 58 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------------KELDLTRQADVEAFFAKE-KPTYVILAAA 58 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------------ccCCCCCHHHHHHHHhcc-CCCEEEEeee
Confidence 699999999999999999999987765432 137999999999988875 5799999998
Q ss_pred CCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEeccc
Q 030328 121 VFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (179)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~ 174 (179)
........ .+.....++.|+.++..+++++.. .+ ..++|++||.
T Consensus 59 ~~~~~~~~---~~~~~~~~~~n~~~~~~ll~~~~~----~~---~~~~i~~SS~ 102 (306)
T PLN02725 59 KVGGIHAN---MTYPADFIRENLQIQTNVIDAAYR----HG---VKKLLFLGSS 102 (306)
T ss_pred eecccchh---hhCcHHHHHHHhHHHHHHHHHHHH----cC---CCeEEEeCce
Confidence 64321111 112234688999999999888732 22 2389999885
No 270
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.14 E-value=7.3e-10 Score=90.10 Aligned_cols=117 Identities=19% Similarity=0.156 Sum_probs=80.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEE
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li 116 (179)
.++++||||+|.||++++++|.++|++|++++|......+...... ...++.++..|+.+.. + .++|+||
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~--~~~~~~~~~~Di~~~~-----~---~~~D~Vi 189 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF--GNPRFELIRHDVVEPI-----L---LEVDQIY 189 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc--cCCceEEEECcccccc-----c---cCCCEEE
Confidence 4689999999999999999999999999999986432111111111 1234666777776532 2 2589999
Q ss_pred ecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 117 VNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 117 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
|.|+...+.... ++....+++|+.++..+++++.. .+ .++|++||.+
T Consensus 190 HlAa~~~~~~~~----~~p~~~~~~Nv~gT~nLleaa~~----~g----~r~V~~SS~~ 236 (436)
T PLN02166 190 HLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG----ARFLLTSTSE 236 (436)
T ss_pred ECceeccchhhc----cCHHHHHHHHHHHHHHHHHHHHH----hC----CEEEEECcHH
Confidence 999865432211 12356789999999999887632 21 2799998863
No 271
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.13 E-value=8e-10 Score=83.96 Aligned_cols=100 Identities=24% Similarity=0.279 Sum_probs=81.6
Q ss_pred EEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEecC
Q 030328 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQ 119 (179)
Q Consensus 40 vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~~a 119 (179)
+||||++|.+|.++++.|. .++.|+.++|.+ .|++|++.+.+++++. ++|++||+|
T Consensus 3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------------~Ditd~~~v~~~i~~~-~PDvVIn~A 58 (281)
T COG1091 3 ILITGANGQLGTELRRALP-GEFEVIATDRAE----------------------LDITDPDAVLEVIRET-RPDVVINAA 58 (281)
T ss_pred EEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------------ccccChHHHHHHHHhh-CCCEEEECc
Confidence 9999999999999999999 778999888854 7999999999999887 699999999
Q ss_pred CCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 120 GVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 120 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
+......- .++.+..+.+|+.++.++.+++-. . ...+|.+||-.
T Consensus 59 Ayt~vD~a----E~~~e~A~~vNa~~~~~lA~aa~~------~--ga~lVhiSTDy 102 (281)
T COG1091 59 AYTAVDKA----ESEPELAFAVNATGAENLARAAAE------V--GARLVHISTDY 102 (281)
T ss_pred cccccccc----cCCHHHHHHhHHHHHHHHHHHHHH------h--CCeEEEeecce
Confidence 97654322 233466799999999999998722 1 23899998753
No 272
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.11 E-value=2.3e-09 Score=89.89 Aligned_cols=125 Identities=17% Similarity=0.246 Sum_probs=86.1
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCC---eEEEEecChhH---HHHHHHHH---------Hhhc--------CceEEE
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGA---RVSILARSGEK---LEEAKQSI---------QLAT--------GIEVAT 91 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~---~v~~~~r~~~~---~~~~~~~~---------~~~~--------~~~v~~ 91 (179)
+++|+++||||+|.+|+.++++|++.+. +|++..|.... .+...+++ .... ..++..
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 5799999999999999999999998764 57888885432 22221121 1111 236888
Q ss_pred EEeeCCCH------HHHHHHHHhhCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCC
Q 030328 92 YSADVRDF------DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGP 165 (179)
Q Consensus 92 ~~~D~~~~------~~v~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 165 (179)
+..|++++ +..+.+.+ .+|++||+|+.... .+..+..+++|+.|+.++++.+... + ..
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~~---~vDiVIH~AA~v~f-------~~~~~~a~~vNV~GT~nLLelA~~~----~--~l 260 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIAK---EVDVIINSAANTTF-------DERYDVAIDINTRGPCHLMSFAKKC----K--KL 260 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHHh---cCCEEEECcccccc-------ccCHHHHHHHHHHHHHHHHHHHHHc----C--CC
Confidence 99999986 23344433 58999999986542 1335667899999999999876321 1 12
Q ss_pred cEEEEecccC
Q 030328 166 ASIALMSSQA 175 (179)
Q Consensus 166 ~~iv~iss~~ 175 (179)
.+++.+||..
T Consensus 261 k~fV~vSTay 270 (605)
T PLN02503 261 KLFLQVSTAY 270 (605)
T ss_pred CeEEEccCce
Confidence 3788888853
No 273
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=99.10 E-value=3e-10 Score=84.66 Aligned_cols=101 Identities=13% Similarity=0.184 Sum_probs=72.4
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHH----hhC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD----EAG 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~----~~~ 110 (179)
+..-+.+=..++||||.++|++|+++|++|+++++... +... . ...+|+++.++++++++ .++
T Consensus 13 iD~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~-~----~~~~Dv~d~~s~~~l~~~v~~~~g 79 (227)
T TIGR02114 13 IDSVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPE-P----HPNLSIREIETTKDLLITLKELVQ 79 (227)
T ss_pred CCCceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------cccc-c----CCcceeecHHHHHHHHHHHHHHcC
Confidence 33334444467899999999999999999999876311 1000 1 13478888888776654 357
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHH
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIK 151 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 151 (179)
++|++|||||.....++.+.+.++|++++.. +.+.+.+
T Consensus 80 ~iDiLVnnAgv~d~~~~~~~s~e~~~~~~~~---~~~~~~~ 117 (227)
T TIGR02114 80 EHDILIHSMAVSDYTPVYMTDLEQVQASDNL---NEFLSKQ 117 (227)
T ss_pred CCCEEEECCEeccccchhhCCHHHHhhhcch---hhhhccc
Confidence 8999999999877778888999999877544 5555554
No 274
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.10 E-value=1.9e-09 Score=91.87 Aligned_cols=118 Identities=20% Similarity=0.223 Sum_probs=81.8
Q ss_pred EEEEEcCCCchHHHHHHHHH--HcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCH------HHHHHHHHhhC
Q 030328 39 HVFITGGSSGIGLALAHQAA--KEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDF------DAVKTALDEAG 110 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~--~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~------~~v~~~~~~~~ 110 (179)
++|||||+|.||++++++|. ++|++|++++|+... +............++..+.+|++++ +.++++ .
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~ 76 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----G 76 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----c
Confidence 69999999999999999999 589999999996532 1111111111124678889999984 333333 4
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
++|++||+|+..... .+ .....++|+.++..+++++.. .+ ..+++++||..
T Consensus 77 ~~D~Vih~Aa~~~~~----~~---~~~~~~~nv~gt~~ll~~a~~----~~---~~~~v~~SS~~ 127 (657)
T PRK07201 77 DIDHVVHLAAIYDLT----AD---EEAQRAANVDGTRNVVELAER----LQ---AATFHHVSSIA 127 (657)
T ss_pred CCCEEEECceeecCC----CC---HHHHHHHHhHHHHHHHHHHHh----cC---CCeEEEEeccc
Confidence 799999999864321 12 234578899999988887632 22 23899999864
No 275
>PLN02778 3,5-epimerase/4-reductase
Probab=99.08 E-value=2.2e-09 Score=83.19 Aligned_cols=91 Identities=13% Similarity=0.155 Sum_probs=67.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEE
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li 116 (179)
.+++|||||+|.||++++++|.++|++|+... .|+.+.+.+...++.. ++|++|
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------------~~~~~~~~v~~~l~~~-~~D~Vi 62 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------------GRLENRASLEADIDAV-KPTHVF 62 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------------CccCCHHHHHHHHHhc-CCCEEE
Confidence 46899999999999999999999999986432 2344555566555544 589999
Q ss_pred ecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHc
Q 030328 117 VNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAAL 154 (179)
Q Consensus 117 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 154 (179)
|.||....... +...++....+++|+.++..+++++.
T Consensus 63 H~Aa~~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~ 99 (298)
T PLN02778 63 NAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCR 99 (298)
T ss_pred ECCcccCCCCc-hhhhhCHHHHHHHHHHHHHHHHHHHH
Confidence 99997653221 11223445679999999999999873
No 276
>PRK08309 short chain dehydrogenase; Provisional
Probab=99.05 E-value=3.5e-09 Score=75.97 Aligned_cols=81 Identities=28% Similarity=0.391 Sum_probs=64.7
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hCCCc
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AGPVD 113 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~~id 113 (179)
++++||||+ |+|.+++++|+++|++|.+++|++++.+.....+.. ...+..+.+|++|.+++.+++++ .+++|
T Consensus 1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~--~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id 77 (177)
T PRK08309 1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT--PESITPLPLDYHDDDALKLAIKSTIEKNGPFD 77 (177)
T ss_pred CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence 368999997 777889999999999999999998776665544432 34677889999999999887765 47889
Q ss_pred EEEecCCC
Q 030328 114 VLVVNQGV 121 (179)
Q Consensus 114 ~li~~ag~ 121 (179)
++|+..-.
T Consensus 78 ~lv~~vh~ 85 (177)
T PRK08309 78 LAVAWIHS 85 (177)
T ss_pred EEEEeccc
Confidence 99887654
No 277
>PRK12320 hypothetical protein; Provisional
Probab=99.02 E-value=5.2e-09 Score=88.85 Aligned_cols=104 Identities=22% Similarity=0.269 Sum_probs=77.1
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEec
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~~ 118 (179)
+++||||+|.||++++++|.++|++|++++|++... ....+.++.+|+++.. +.+.++ ++|++||.
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~----------~~~~ve~v~~Dl~d~~-l~~al~---~~D~VIHL 67 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA----------LDPRVDYVCASLRNPV-LQELAG---EADAVIHL 67 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc----------ccCCceEEEccCCCHH-HHHHhc---CCCEEEEc
Confidence 699999999999999999999999999999875321 1234677889999874 555444 68999999
Q ss_pred CCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCc
Q 030328 119 QGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAG 176 (179)
Q Consensus 119 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g 176 (179)
|+.... + ..++|+.++.++++++. +. + .++|++||..|
T Consensus 68 Aa~~~~--------~----~~~vNv~Gt~nLleAA~----~~--G--vRiV~~SS~~G 105 (699)
T PRK12320 68 APVDTS--------A----PGGVGITGLAHVANAAA----RA--G--ARLLFVSQAAG 105 (699)
T ss_pred CccCcc--------c----hhhHHHHHHHHHHHHHH----Hc--C--CeEEEEECCCC
Confidence 975311 1 12478999998888762 22 2 27999998754
No 278
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.01 E-value=1.5e-09 Score=85.15 Aligned_cols=124 Identities=20% Similarity=0.271 Sum_probs=87.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEG--ARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
+..+++||||+|.+|++++++|.+++ .++.++|..+....-..++... ...++.++.+|+.+..++...++ +.
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~---~~- 77 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF-RSGRVTVILGDLLDANSISNAFQ---GA- 77 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc-cCCceeEEecchhhhhhhhhhcc---Cc-
Confidence 56799999999999999999999998 7799999876421111111111 35678899999998887777765 45
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
.++|+|+...+. ....+-+..+++|+.|+.++.+++.. . +..++|.+||..
T Consensus 78 ~Vvh~aa~~~~~----~~~~~~~~~~~vNV~gT~nvi~~c~~----~---~v~~lIYtSs~~ 128 (361)
T KOG1430|consen 78 VVVHCAASPVPD----FVENDRDLAMRVNVNGTLNVIEACKE----L---GVKRLIYTSSAY 128 (361)
T ss_pred eEEEeccccCcc----ccccchhhheeecchhHHHHHHHHHH----h---CCCEEEEecCce
Confidence 566665543321 22224567899999999888887733 2 234899999864
No 279
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.00 E-value=3.8e-09 Score=81.02 Aligned_cols=97 Identities=22% Similarity=0.226 Sum_probs=66.5
Q ss_pred EEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEecC
Q 030328 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQ 119 (179)
Q Consensus 40 vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~~a 119 (179)
+|||||+|.||++++++|.++|++|++++|+++...... . .. ..|... . ...+...++|++||+|
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~---~~----~~~~~~-~---~~~~~~~~~D~Vvh~a 65 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----W---EG----YKPWAP-L---AESEALEGADAVINLA 65 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----c---ee----eecccc-c---chhhhcCCCCEEEECC
Confidence 589999999999999999999999999999876432110 0 00 112221 1 1223345799999999
Q ss_pred CCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHH
Q 030328 120 GVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAA 153 (179)
Q Consensus 120 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 153 (179)
|..... .+.+.+..+..+++|+.++..+++++
T Consensus 66 ~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~ 97 (292)
T TIGR01777 66 GEPIAD--KRWTEERKQEIRDSRIDTTRALVEAI 97 (292)
T ss_pred CCCccc--ccCCHHHHHHHHhcccHHHHHHHHHH
Confidence 864321 12344555677899999998888876
No 280
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=98.99 E-value=3.3e-09 Score=80.13 Aligned_cols=115 Identities=17% Similarity=0.245 Sum_probs=69.9
Q ss_pred EEcCCCchHHHHHHHHHHcCC--eEEEEecChhH---HHHHHHHHH-----h----hcCceEEEEEeeCCCHH------H
Q 030328 42 ITGGSSGIGLALAHQAAKEGA--RVSILARSGEK---LEEAKQSIQ-----L----ATGIEVATYSADVRDFD------A 101 (179)
Q Consensus 42 ItGa~~~iG~~la~~l~~~g~--~v~~~~r~~~~---~~~~~~~~~-----~----~~~~~v~~~~~D~~~~~------~ 101 (179)
||||+|.+|.++.++|++++. +|++..|..+. .++..+.+. . ....++.++.+|++++. +
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999986 89999997643 222222211 0 12568999999999843 3
Q ss_pred HHHHHHhhCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecc
Q 030328 102 VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (179)
Q Consensus 102 v~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss 173 (179)
.+++.+ .+|++||+|+...... ..++..++|+.|+..+++.+.. +...+++++||
T Consensus 81 ~~~L~~---~v~~IiH~Aa~v~~~~-------~~~~~~~~NV~gt~~ll~la~~-------~~~~~~~~iST 135 (249)
T PF07993_consen 81 YQELAE---EVDVIIHCAASVNFNA-------PYSELRAVNVDGTRNLLRLAAQ-------GKRKRFHYIST 135 (249)
T ss_dssp HHHHHH---H--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHTS-------SS---EEEEEE
T ss_pred hhcccc---ccceeeecchhhhhcc-------cchhhhhhHHHHHHHHHHHHHh-------ccCcceEEecc
Confidence 344433 6899999998654211 2233578999999999998731 11238999998
No 281
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.92 E-value=1.9e-08 Score=77.71 Aligned_cols=84 Identities=24% Similarity=0.346 Sum_probs=63.7
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecCh---hHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSG---EKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~~---~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~ 109 (179)
.+++|+++|+|| ||+|++++..|++.|++ |++++|+. ++.++..+++... +..+....+|+++.+++++.++
T Consensus 123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~-~~~~~~~~~d~~~~~~~~~~~~-- 198 (289)
T PRK12548 123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQE-VPECIVNVYDLNDTEKLKAEIA-- 198 (289)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhc-CCCceeEEechhhhhHHHhhhc--
Confidence 357899999999 69999999999999997 99999986 5666666655432 2334455678887777766555
Q ss_pred CCCcEEEecCCCC
Q 030328 110 GPVDVLVVNQGVF 122 (179)
Q Consensus 110 ~~id~li~~ag~~ 122 (179)
..|++||+....
T Consensus 199 -~~DilINaTp~G 210 (289)
T PRK12548 199 -SSDILVNATLVG 210 (289)
T ss_pred -cCCEEEEeCCCC
Confidence 469999987544
No 282
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.88 E-value=1.3e-08 Score=81.58 Aligned_cols=80 Identities=25% Similarity=0.329 Sum_probs=62.2
Q ss_pred CcCCcEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCC
Q 030328 34 PIKDRHVFITGG----------------SSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVR 97 (179)
Q Consensus 34 ~~~~k~vlItGa----------------~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 97 (179)
+++||+++|||| +|.+|.++|++|+++|++|++++++.+ .+ . + .. ...+|++
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-------~-~-~~--~~~~dv~ 252 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-------T-P-AG--VKRIDVE 252 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-------C-C-CC--cEEEccC
Confidence 368999999999 555999999999999999999998752 11 0 1 11 2467999
Q ss_pred CHHHHHHHHHh-hCCCcEEEecCCCCCCC
Q 030328 98 DFDAVKTALDE-AGPVDVLVVNQGVFVPG 125 (179)
Q Consensus 98 ~~~~v~~~~~~-~~~id~li~~ag~~~~~ 125 (179)
+.+++.+.+++ ++++|++|||||+....
T Consensus 253 ~~~~~~~~v~~~~~~~DilI~~Aav~d~~ 281 (399)
T PRK05579 253 SAQEMLDAVLAALPQADIFIMAAAVADYR 281 (399)
T ss_pred CHHHHHHHHHHhcCCCCEEEEcccccccc
Confidence 98888776654 67899999999986543
No 283
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.87 E-value=2.6e-08 Score=85.19 Aligned_cols=91 Identities=14% Similarity=0.144 Sum_probs=69.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEE
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li 116 (179)
.+++|||||+|.||++++++|.++|++|.. ...|++|.+.+.+.++.. ++|++|
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~-------------------------~~~~l~d~~~v~~~i~~~-~pd~Vi 433 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY-------------------------GKGRLEDRSSLLADIRNV-KPTHVF 433 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCeEEe-------------------------eccccccHHHHHHHHHhh-CCCEEE
Confidence 457999999999999999999999988631 113577888888887765 589999
Q ss_pred ecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHc
Q 030328 117 VNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAAL 154 (179)
Q Consensus 117 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 154 (179)
|+|+....... +...++....+++|+.++.++++++.
T Consensus 434 h~Aa~~~~~~~-~~~~~~~~~~~~~N~~gt~~l~~a~~ 470 (668)
T PLN02260 434 NAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCR 470 (668)
T ss_pred ECCcccCCCCC-ChHHhCHHHHHHHHhHHHHHHHHHHH
Confidence 99997653221 12233456779999999999999873
No 284
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.86 E-value=7.1e-08 Score=70.24 Aligned_cols=85 Identities=25% Similarity=0.319 Sum_probs=67.0
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCC
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~i 112 (179)
..+++++++|+|++|++|+++++.|+++|++|++++|+.++.++..+++....+.. ....|..+.+++.+.++ +.
T Consensus 24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~--~~~~~~~~~~~~~~~~~---~~ 98 (194)
T cd01078 24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEG--VGAVETSDDAARAAAIK---GA 98 (194)
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCc--EEEeeCCCHHHHHHHHh---cC
Confidence 35688999999999999999999999999999999999888877776664333333 44578888887777665 57
Q ss_pred cEEEecCCCC
Q 030328 113 DVLVVNQGVF 122 (179)
Q Consensus 113 d~li~~ag~~ 122 (179)
|++|++.+..
T Consensus 99 diVi~at~~g 108 (194)
T cd01078 99 DVVFAAGAAG 108 (194)
T ss_pred CEEEECCCCC
Confidence 8888876543
No 285
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=98.85 E-value=2.4e-08 Score=76.73 Aligned_cols=73 Identities=15% Similarity=0.197 Sum_probs=58.2
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh---hCC-CcE
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE---AGP-VDV 114 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~---~~~-id~ 114 (179)
+++||||+|.+|++++++|.++|++|.+..|+++... ...+....+|+.|++++++.++. ... +|.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~ 70 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISA 70 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----------CCCCccccccCCCHHHHHHHHhcccCcCCceeE
Confidence 3899999999999999999999999999999876431 01234467899999999988842 234 899
Q ss_pred EEecCCC
Q 030328 115 LVVNQGV 121 (179)
Q Consensus 115 li~~ag~ 121 (179)
++++++.
T Consensus 71 v~~~~~~ 77 (285)
T TIGR03649 71 VYLVAPP 77 (285)
T ss_pred EEEeCCC
Confidence 9888763
No 286
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.84 E-value=9.7e-09 Score=77.40 Aligned_cols=129 Identities=17% Similarity=0.168 Sum_probs=94.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHH--HHH-HHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCC
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKL--EEA-KQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~--~~~-~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~i 112 (179)
.+|++||||-+|.=|.=+|+.|.++|+.|..+.|+.... ..+ ..+..-..+.++..+.+|++|...+.++++.. .+
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v-~P 79 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV-QP 79 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc-Cc
Confidence 368999999999999999999999999999998874422 111 01111123456889999999999999999887 58
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEeccc
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~ 174 (179)
|-+.|-|+..+.+ .+.++...+.+++..|+++++++. +.+. . ...++-.-||.
T Consensus 80 dEIYNLaAQS~V~----vSFe~P~~T~~~~~iGtlrlLEai-R~~~-~---~~~rfYQAStS 132 (345)
T COG1089 80 DEIYNLAAQSHVG----VSFEQPEYTADVDAIGTLRLLEAI-RILG-E---KKTRFYQASTS 132 (345)
T ss_pred hhheecccccccc----ccccCcceeeeechhHHHHHHHHH-HHhC-C---cccEEEecccH
Confidence 9899988866654 344555667899999999999875 2221 1 12466666553
No 287
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=98.80 E-value=1.5e-08 Score=88.46 Aligned_cols=139 Identities=20% Similarity=0.325 Sum_probs=110.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChhHHHHHHHHHHh--hcCceEEEEEeeCCCHHHHHHHHHh---h
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGEKLEEAKQSIQL--ATGIEVATYSADVRDFDAVKTALDE---A 109 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~~v~~~~~~---~ 109 (179)
..|.++|+|+-||.|..+|+||..+|++ +++++|+.-+.......+.. +.|..+..-..|++..+...++++. .
T Consensus 1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl 1846 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKL 1846 (2376)
T ss_pred ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhc
Confidence 4789999999999999999999999998 77888887554433333332 3478888888888888888888765 5
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcccC
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQVG 179 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~~g 179 (179)
+++..++|-|.+..+.-+++.+++.|++.-+..+.++.++-+..-..- ....++|..||++.-+|
T Consensus 1847 ~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C-----~~LdyFv~FSSvscGRG 1911 (2376)
T KOG1202|consen 1847 GPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREIC-----PELDYFVVFSSVSCGRG 1911 (2376)
T ss_pred ccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhC-----cccceEEEEEeecccCC
Confidence 788999999999999999999999999999999999999876542211 13458999999865443
No 288
>PLN00016 RNA-binding protein; Provisional
Probab=98.75 E-value=1.2e-07 Score=75.94 Aligned_cols=82 Identities=29% Similarity=0.438 Sum_probs=57.2
Q ss_pred cCCcEEEEE----cCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHH----HHHhhcCceEEEEEeeCCCHHHHHHHH
Q 030328 35 IKDRHVFIT----GGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQ----SIQLATGIEVATYSADVRDFDAVKTAL 106 (179)
Q Consensus 35 ~~~k~vlIt----Ga~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~----~~~~~~~~~v~~~~~D~~~~~~v~~~~ 106 (179)
...++++|| ||+|.||.+++++|.++|++|++++|+......... .........+..+.+|+.| +++++
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~ 126 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKV 126 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhh
Confidence 346789999 999999999999999999999999998754322110 0000011236677888765 45555
Q ss_pred HhhCCCcEEEecCC
Q 030328 107 DEAGPVDVLVVNQG 120 (179)
Q Consensus 107 ~~~~~id~li~~ag 120 (179)
. ...+|++||+++
T Consensus 127 ~-~~~~d~Vi~~~~ 139 (378)
T PLN00016 127 A-GAGFDVVYDNNG 139 (378)
T ss_pred c-cCCccEEEeCCC
Confidence 3 236899999876
No 289
>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function. One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].
Probab=98.72 E-value=6.4e-07 Score=68.86 Aligned_cols=122 Identities=16% Similarity=0.240 Sum_probs=90.3
Q ss_pred CCcEEEEEcC-CCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh----hC
Q 030328 36 KDRHVFITGG-SSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE----AG 110 (179)
Q Consensus 36 ~~k~vlItGa-~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~----~~ 110 (179)
+.+.|+|.|. ...+++.+|.-|-++|+-|+++..+.++......+- ..++.....|..++.+++..+++ ..
T Consensus 2 R~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~----~~dI~~L~ld~~~~~~~~~~l~~f~~~L~ 77 (299)
T PF08643_consen 2 RKEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED----RPDIRPLWLDDSDPSSIHASLSRFASLLS 77 (299)
T ss_pred ceeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc----CCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence 3568899996 799999999999999999999999987665544432 34466666777555554443332 21
Q ss_pred --------------CCcEEEecCC-CCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhcc
Q 030328 111 --------------PVDVLVVNQG-VFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQ 161 (179)
Q Consensus 111 --------------~id~li~~ag-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 161 (179)
.+..+|.-.. ....+|++.++.++|.+.++.|+..++.++|.++|+++.+.
T Consensus 78 ~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~ 143 (299)
T PF08643_consen 78 RPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRS 143 (299)
T ss_pred CCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2344444333 23567889999999999999999999999999999998844
No 290
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=98.70 E-value=9.4e-08 Score=76.47 Aligned_cols=80 Identities=34% Similarity=0.432 Sum_probs=61.9
Q ss_pred cCCcEEEEEcC---------------CCc-hHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCC
Q 030328 35 IKDRHVFITGG---------------SSG-IGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRD 98 (179)
Q Consensus 35 ~~~k~vlItGa---------------~~~-iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 98 (179)
++||+++|||+ |+| +|.++|+++..+|++|++++++.+.. . ...+ ...|+++
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------~----~~~~--~~~~v~~ 250 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------T----PPGV--KSIKVST 250 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------C----CCCc--EEEEecc
Confidence 68999999999 556 99999999999999999988765321 1 1112 4579999
Q ss_pred HHHH-HHHHHh-hCCCcEEEecCCCCCCCC
Q 030328 99 FDAV-KTALDE-AGPVDVLVVNQGVFVPGE 126 (179)
Q Consensus 99 ~~~v-~~~~~~-~~~id~li~~ag~~~~~~ 126 (179)
.+++ ++++++ .+.+|++|+|||+....+
T Consensus 251 ~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~ 280 (390)
T TIGR00521 251 AEEMLEAALNELAKDFDIFISAAAVADFKP 280 (390)
T ss_pred HHHHHHHHHHhhcccCCEEEEccccccccc
Confidence 8888 667644 467999999999876543
No 291
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.67 E-value=2.4e-07 Score=69.21 Aligned_cols=97 Identities=16% Similarity=0.121 Sum_probs=63.5
Q ss_pred EEEEEc-CCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHH-HHHHHHhhCCCcEEE
Q 030328 39 HVFITG-GSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDA-VKTALDEAGPVDVLV 116 (179)
Q Consensus 39 ~vlItG-a~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-v~~~~~~~~~id~li 116 (179)
+=.||. ++|++|.++|++|+++|++|++++|+.... ......+..+.++ +.++ .+.+.+..+.+|++|
T Consensus 17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--------~~~~~~v~~i~v~--s~~~m~~~l~~~~~~~DivI 86 (229)
T PRK06732 17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--------PEPHPNLSIIEIE--NVDDLLETLEPLVKDHDVLI 86 (229)
T ss_pred ceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc--------CCCCCCeEEEEEe--cHHHHHHHHHHHhcCCCEEE
Confidence 445664 455699999999999999999998764210 0011234444443 2222 233334456789999
Q ss_pred ecCCCCCCCCcccCCHHHHHHHHHhhhhH
Q 030328 117 VNQGVFVPGELEVQSLDEVRLMIDVNIIG 145 (179)
Q Consensus 117 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 145 (179)
|+||.....+....+.+++..++++|...
T Consensus 87 h~AAvsd~~~~~~~~~~~~~~~~~v~~~~ 115 (229)
T PRK06732 87 HSMAVSDYTPVYMTDLEEVSASDNLNEFL 115 (229)
T ss_pred eCCccCCceehhhhhhhhhhhhhhhhhhh
Confidence 99998765555566788888888886544
No 292
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=98.60 E-value=5.7e-07 Score=67.76 Aligned_cols=114 Identities=22% Similarity=0.283 Sum_probs=67.0
Q ss_pred EEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEecC
Q 030328 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQ 119 (179)
Q Consensus 40 vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~~a 119 (179)
++|||++|.||++++.+|.+.|..|+++.|++...+... ...+ ...+.+.+..+. ++|+|||-|
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~-------~~~v-------~~~~~~~~~~~~--~~DavINLA 64 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL-------HPNV-------TLWEGLADALTL--GIDAVINLA 64 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc-------Cccc-------cccchhhhcccC--CCCEEEECC
Confidence 589999999999999999999999999999987544211 1111 112223333222 699999999
Q ss_pred CCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 120 GVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 120 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
|..-... ..+++.=+..++.- +..++.+.....+... .+..+++-| ..|.
T Consensus 65 G~~I~~r--rWt~~~K~~i~~SR----i~~T~~L~e~I~~~~~-~P~~~isaS-AvGy 114 (297)
T COG1090 65 GEPIAER--RWTEKQKEEIRQSR----INTTEKLVELIAASET-KPKVLISAS-AVGY 114 (297)
T ss_pred CCccccc--cCCHHHHHHHHHHH----hHHHHHHHHHHHhccC-CCcEEEecc-eEEE
Confidence 9543211 03444333444433 3444555555554433 233455443 4443
No 293
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=98.60 E-value=1.1e-06 Score=80.70 Aligned_cols=123 Identities=15% Similarity=0.186 Sum_probs=82.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcC----CeEEEEecChhHHHH---HHHHHHh------hcCceEEEEEeeCCCH---
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEG----ARVSILARSGEKLEE---AKQSIQL------ATGIEVATYSADVRDF--- 99 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g----~~v~~~~r~~~~~~~---~~~~~~~------~~~~~v~~~~~D~~~~--- 99 (179)
..++++||||+|.+|.+++++|.+++ .+|++..|+....+. ..+.... ....++.++.+|++++
T Consensus 970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 35799999999999999999999887 789988887543221 2111110 0113688889999754
Q ss_pred ---HHHHHHHHhhCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 100 ---DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 100 ---~~v~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
+..+++. ..+|++||+|+.... ..+ .......|+.|+..+++.+.. . ...+++++||.+
T Consensus 1050 l~~~~~~~l~---~~~d~iiH~Aa~~~~----~~~---~~~~~~~nv~gt~~ll~~a~~----~---~~~~~v~vSS~~ 1111 (1389)
T TIGR03443 1050 LSDEKWSDLT---NEVDVIIHNGALVHW----VYP---YSKLRDANVIGTINVLNLCAE----G---KAKQFSFVSSTS 1111 (1389)
T ss_pred cCHHHHHHHH---hcCCEEEECCcEecC----ccC---HHHHHHhHHHHHHHHHHHHHh----C---CCceEEEEeCee
Confidence 3333333 368999999986531 112 233456799999999887632 1 123899999864
No 294
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.56 E-value=3.3e-07 Score=69.29 Aligned_cols=119 Identities=24% Similarity=0.266 Sum_probs=80.5
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
+..+++++||||+|.||+++|.+|..+|..|++.|.-...-.+..+- +.....+..+.-|+.. ++++ .+|
T Consensus 24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~--~~~~~~fel~~hdv~~-----pl~~---evD 93 (350)
T KOG1429|consen 24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEH--WIGHPNFELIRHDVVE-----PLLK---EVD 93 (350)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcch--hccCcceeEEEeechh-----HHHH---Hhh
Confidence 35679999999999999999999999999999998754322111111 1123445566666643 3554 578
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEeccc
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~ 174 (179)
-++|-|+...+......+ -+++.+|..++..++..+.+- + .+++..|+.
T Consensus 94 ~IyhLAapasp~~y~~np----vktIktN~igtln~lglakrv----~----aR~l~aSTs 142 (350)
T KOG1429|consen 94 QIYHLAAPASPPHYKYNP----VKTIKTNVIGTLNMLGLAKRV----G----ARFLLASTS 142 (350)
T ss_pred hhhhhccCCCCcccccCc----cceeeecchhhHHHHHHHHHh----C----ceEEEeecc
Confidence 888888876654433222 346889999999988776332 2 278777764
No 295
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.56 E-value=4.9e-07 Score=71.92 Aligned_cols=78 Identities=29% Similarity=0.503 Sum_probs=66.5
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEE
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li 116 (179)
++++|.|| |++|+.+|+.|+++| .+|++.||+.+++.++.... +.++.....|..+.+.+.+++++ .|++|
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~----~~~v~~~~vD~~d~~al~~li~~---~d~VI 73 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI----GGKVEALQVDAADVDALVALIKD---FDLVI 73 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc----cccceeEEecccChHHHHHHHhc---CCEEE
Confidence 67899999 999999999999999 89999999988877665543 33788899999999999998885 49999
Q ss_pred ecCCCCC
Q 030328 117 VNQGVFV 123 (179)
Q Consensus 117 ~~ag~~~ 123 (179)
|++....
T Consensus 74 n~~p~~~ 80 (389)
T COG1748 74 NAAPPFV 80 (389)
T ss_pred EeCCchh
Confidence 9987544
No 296
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.54 E-value=2.3e-06 Score=67.25 Aligned_cols=121 Identities=19% Similarity=0.288 Sum_probs=80.8
Q ss_pred cEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChh---HHHHHHHHHH------hhcCceEEEEEeeCCCH------HH
Q 030328 38 RHVFITGGSSGIGLALAHQAAKE-GARVSILARSGE---KLEEAKQSIQ------LATGIEVATYSADVRDF------DA 101 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~-g~~v~~~~r~~~---~~~~~~~~~~------~~~~~~v~~~~~D~~~~------~~ 101 (179)
+++++|||+|.+|..+..+|..+ .++|++..|... ..++..+.+. .....++..+..|++.+ ..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 57999999999999999998855 579999888554 2222222222 13366899999999853 22
Q ss_pred HHHHHHhhCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 102 VKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 102 v~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
..++.+ .+|.++||++..+-- .+ ..+....|+.|+..+++.+.. |....+.++||++
T Consensus 81 ~~~La~---~vD~I~H~gA~Vn~v----~p---Ys~L~~~NVlGT~evlrLa~~-------gk~Kp~~yVSsis 137 (382)
T COG3320 81 WQELAE---NVDLIIHNAALVNHV----FP---YSELRGANVLGTAEVLRLAAT-------GKPKPLHYVSSIS 137 (382)
T ss_pred HHHHhh---hcceEEecchhhccc----Cc---HHHhcCcchHhHHHHHHHHhc-------CCCceeEEEeeee
Confidence 333333 599999999865411 12 234578899999998887622 1223577888764
No 297
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.50 E-value=1.3e-06 Score=59.93 Aligned_cols=79 Identities=24% Similarity=0.458 Sum_probs=59.5
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~i 112 (179)
++++++++|.|| ||.|++++..|.+.|++ |+++.|+.++.++..+++. +..+... ++.+ +.+..+ ..
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~---~~~~~~~--~~~~---~~~~~~---~~ 76 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG---GVNIEAI--PLED---LEEALQ---EA 76 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT---GCSEEEE--EGGG---HCHHHH---TE
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC---cccccee--eHHH---HHHHHh---hC
Confidence 579999999998 99999999999999988 9999999998888877762 2334333 3333 333444 68
Q ss_pred cEEEecCCCCCC
Q 030328 113 DVLVVNQGVFVP 124 (179)
Q Consensus 113 d~li~~ag~~~~ 124 (179)
|++||+.+....
T Consensus 77 DivI~aT~~~~~ 88 (135)
T PF01488_consen 77 DIVINATPSGMP 88 (135)
T ss_dssp SEEEE-SSTTST
T ss_pred CeEEEecCCCCc
Confidence 999999876543
No 298
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.44 E-value=1.5e-06 Score=69.79 Aligned_cols=76 Identities=28% Similarity=0.454 Sum_probs=59.6
Q ss_pred EEEEcCCCchHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEe
Q 030328 40 VFITGGSSGIGLALAHQAAKEGA--RVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (179)
Q Consensus 40 vlItGa~~~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~ 117 (179)
|+|.|+ |.+|+.+++.|++++- +|++.+|+.+++++..+++ .+.++....+|+.|.++++++++ +.|++||
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~l~~~~~---~~dvVin 73 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL---LGDRVEAVQVDVNDPESLAELLR---GCDVVIN 73 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT-----TTTTEEEEE--TTTHHHHHHHHT---TSSEEEE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc---cccceeEEEEecCCHHHHHHHHh---cCCEEEE
Confidence 689999 9999999999998874 7999999999888776654 35678999999999999988887 4599999
Q ss_pred cCCCC
Q 030328 118 NQGVF 122 (179)
Q Consensus 118 ~ag~~ 122 (179)
++|..
T Consensus 74 ~~gp~ 78 (386)
T PF03435_consen 74 CAGPF 78 (386)
T ss_dssp -SSGG
T ss_pred CCccc
Confidence 99864
No 299
>PRK09620 hypothetical protein; Provisional
Probab=98.42 E-value=5.3e-07 Score=67.28 Aligned_cols=83 Identities=22% Similarity=0.305 Sum_probs=53.3
Q ss_pred cCCcEEEEEcCC----------------CchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCC
Q 030328 35 IKDRHVFITGGS----------------SGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRD 98 (179)
Q Consensus 35 ~~~k~vlItGa~----------------~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 98 (179)
+.||+++||+|+ |.+|.++|++|.++|++|+++++....... ... .+.....+..|...
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~--~~~~~~~V~s~~d~ 75 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN--NQLELHPFEGIIDL 75 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC--CceeEEEEecHHHH
Confidence 368999999886 999999999999999999988864321110 000 12222233332222
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCCC
Q 030328 99 FDAVKTALDEAGPVDVLVVNQGVFV 123 (179)
Q Consensus 99 ~~~v~~~~~~~~~id~li~~ag~~~ 123 (179)
.+.+.+++++. ++|++||.|+...
T Consensus 76 ~~~l~~~~~~~-~~D~VIH~AAvsD 99 (229)
T PRK09620 76 QDKMKSIITHE-KVDAVIMAAAGSD 99 (229)
T ss_pred HHHHHHHhccc-CCCEEEECccccc
Confidence 23455555433 5899999999754
No 300
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.40 E-value=4.5e-06 Score=63.35 Aligned_cols=75 Identities=20% Similarity=0.259 Sum_probs=61.5
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEe
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~ 117 (179)
+.++||||+|.+|++++++|.++|++|.+..|+++...... ..+.....|+.+++.+...++ +.+.+++
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--------~~v~~~~~d~~~~~~l~~a~~---G~~~~~~ 69 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--------GGVEVVLGDLRDPKSLVAGAK---GVDGVLL 69 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--------CCcEEEEeccCCHhHHHHHhc---cccEEEE
Confidence 46899999999999999999999999999999988765443 456778899999988877776 5777777
Q ss_pred cCCCCC
Q 030328 118 NQGVFV 123 (179)
Q Consensus 118 ~ag~~~ 123 (179)
..+...
T Consensus 70 i~~~~~ 75 (275)
T COG0702 70 ISGLLD 75 (275)
T ss_pred Eecccc
Confidence 666433
No 301
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=98.36 E-value=4.2e-06 Score=67.92 Aligned_cols=126 Identities=15% Similarity=0.263 Sum_probs=84.1
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcC---CeEEEEecChh---HHHHHH--------HHHHhh---cCceEEEEEeeC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEG---ARVSILARSGE---KLEEAK--------QSIQLA---TGIEVATYSADV 96 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g---~~v~~~~r~~~---~~~~~~--------~~~~~~---~~~~v~~~~~D~ 96 (179)
.+++|+++||||+|.+|+-+..++++.- -++++.-|... ..+... +.+.+. .-.++..+.+|+
T Consensus 9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi 88 (467)
T KOG1221|consen 9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI 88 (467)
T ss_pred HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence 4689999999999999999999999653 24677666432 111111 122211 124677788888
Q ss_pred CCH------HHHHHHHHhhCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEE
Q 030328 97 RDF------DAVKTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIAL 170 (179)
Q Consensus 97 ~~~------~~v~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~ 170 (179)
+++ .+...+. ..+|++||.|+.... .|..+..+.+|..|+..+.+.+.. |.+- ..++.
T Consensus 89 ~~~~LGis~~D~~~l~---~eV~ivih~AAtvrF-------de~l~~al~iNt~Gt~~~l~lak~-~~~l-----~~~vh 152 (467)
T KOG1221|consen 89 SEPDLGISESDLRTLA---DEVNIVIHSAATVRF-------DEPLDVALGINTRGTRNVLQLAKE-MVKL-----KALVH 152 (467)
T ss_pred cCcccCCChHHHHHHH---hcCCEEEEeeeeecc-------chhhhhhhhhhhHhHHHHHHHHHH-hhhh-----heEEE
Confidence 763 2333222 379999999985442 255677799999999999986643 3322 27888
Q ss_pred ecccC
Q 030328 171 MSSQA 175 (179)
Q Consensus 171 iss~~ 175 (179)
+|++-
T Consensus 153 VSTAy 157 (467)
T KOG1221|consen 153 VSTAY 157 (467)
T ss_pred eehhh
Confidence 88764
No 302
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=98.36 E-value=2.8e-06 Score=63.34 Aligned_cols=76 Identities=22% Similarity=0.261 Sum_probs=57.7
Q ss_pred EEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEecC
Q 030328 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQ 119 (179)
Q Consensus 40 vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~~a 119 (179)
|+|+||+|.+|+.+++.|.+.+++|.+..|++... ..+++.. .+. ..+.+|+.|.+++.+.++ ++|.++.+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~--~~~~l~~-~g~--~vv~~d~~~~~~l~~al~---g~d~v~~~~ 72 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSD--RAQQLQA-LGA--EVVEADYDDPESLVAALK---GVDAVFSVT 72 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHH--HHHHHHH-TTT--EEEES-TT-HHHHHHHHT---TCSEEEEES
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchh--hhhhhhc-ccc--eEeecccCCHHHHHHHHc---CCceEEeec
Confidence 68999999999999999999999999999987422 2222322 243 456999999999888887 689998888
Q ss_pred CCCC
Q 030328 120 GVFV 123 (179)
Q Consensus 120 g~~~ 123 (179)
+...
T Consensus 73 ~~~~ 76 (233)
T PF05368_consen 73 PPSH 76 (233)
T ss_dssp SCSC
T ss_pred Ccch
Confidence 7543
No 303
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.36 E-value=3.1e-06 Score=69.29 Aligned_cols=78 Identities=27% Similarity=0.401 Sum_probs=56.9
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-hHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG-EKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~i 112 (179)
.+++|+++|+|+++ +|.++|+.|+++|++|.++|++. +..++..+++.. ..+..+..|..+ +..++.
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~---~~~~~~~~~~~~--------~~~~~~ 69 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE---LGIELVLGEYPE--------EFLEGV 69 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh---cCCEEEeCCcch--------hHhhcC
Confidence 46789999999877 99999999999999999999975 334433344432 124456666654 123478
Q ss_pred cEEEecCCCCC
Q 030328 113 DVLVVNQGVFV 123 (179)
Q Consensus 113 d~li~~ag~~~ 123 (179)
|++|+++|...
T Consensus 70 d~vv~~~g~~~ 80 (450)
T PRK14106 70 DLVVVSPGVPL 80 (450)
T ss_pred CEEEECCCCCC
Confidence 99999998643
No 304
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.31 E-value=6e-06 Score=64.90 Aligned_cols=74 Identities=22% Similarity=0.325 Sum_probs=54.0
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHc-C-CeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKE-G-ARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGP 111 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~-g-~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~ 111 (179)
++.+|+++||||+|.||+.+|++|+++ | .+++++.|+++++++..+++.. .|+ .++++.+ ..
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~----------~~i---~~l~~~l---~~ 215 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG----------GKI---LSLEEAL---PE 215 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc----------ccH---HhHHHHH---cc
Confidence 578999999999999999999999864 5 5799999998877766554321 122 2233333 36
Q ss_pred CcEEEecCCCCC
Q 030328 112 VDVLVVNQGVFV 123 (179)
Q Consensus 112 id~li~~ag~~~ 123 (179)
.|++++.++...
T Consensus 216 aDiVv~~ts~~~ 227 (340)
T PRK14982 216 ADIVVWVASMPK 227 (340)
T ss_pred CCEEEECCcCCc
Confidence 889999888643
No 305
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=98.26 E-value=1.4e-05 Score=56.87 Aligned_cols=74 Identities=23% Similarity=0.328 Sum_probs=60.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEe
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~ 117 (179)
+++.|.||+|-.|+.++++..++|..|+++.|++.+.... ..+...+.|+.|++++.+.+. +.|++|.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---------~~~~i~q~Difd~~~~a~~l~---g~DaVIs 68 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---------QGVTILQKDIFDLTSLASDLA---GHDAVIS 68 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---------ccceeecccccChhhhHhhhc---CCceEEE
Confidence 3678999999999999999999999999999998754321 235567899999988866665 6899999
Q ss_pred cCCCCC
Q 030328 118 NQGVFV 123 (179)
Q Consensus 118 ~ag~~~ 123 (179)
.-|...
T Consensus 69 A~~~~~ 74 (211)
T COG2910 69 AFGAGA 74 (211)
T ss_pred eccCCC
Confidence 887643
No 306
>PTZ00325 malate dehydrogenase; Provisional
Probab=98.20 E-value=1.3e-05 Score=62.66 Aligned_cols=118 Identities=17% Similarity=0.155 Sum_probs=73.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEG--ARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
+.+++.|+|++|.+|..++..++.++ .++.++|++.. +....++.. ... .....+.+++.+..+.++ ..|
T Consensus 7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~--~g~a~Dl~~-~~~--~~~v~~~td~~~~~~~l~---gaD 78 (321)
T PTZ00325 7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGA--PGVAADLSH-IDT--PAKVTGYADGELWEKALR---GAD 78 (321)
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCC--cccccchhh-cCc--CceEEEecCCCchHHHhC---CCC
Confidence 56699999999999999999999655 56999999322 111112211 111 223345555444333333 789
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEeccc
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~ 174 (179)
++|+++|....+ .+++.+.+..|+...-.+.+++ ++.+ +.+++.++|.
T Consensus 79 vVVitaG~~~~~------~~tR~dll~~N~~i~~~i~~~i----~~~~---~~~iviv~SN 126 (321)
T PTZ00325 79 LVLICAGVPRKP------GMTRDDLFNTNAPIVRDLVAAV----ASSA---PKAIVGIVSN 126 (321)
T ss_pred EEEECCCCCCCC------CCCHHHHHHHHHHHHHHHHHHH----HHHC---CCeEEEEecC
Confidence 999999974321 1234566888887776666654 4333 2367777653
No 307
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=98.14 E-value=0.00022 Score=59.54 Aligned_cols=126 Identities=17% Similarity=0.158 Sum_probs=88.7
Q ss_pred CCCcCcCCcEEEEEcCC-CchHHHHHHHHHHcCCeEEEEecChhH-HHHHHHHHHh---hcCceEEEEEeeCCCHHHHHH
Q 030328 30 PVRIPIKDRHVFITGGS-SGIGLALAHQAAKEGARVSILARSGEK-LEEAKQSIQL---ATGIEVATYSADVRDFDAVKT 104 (179)
Q Consensus 30 ~~~~~~~~k~vlItGa~-~~iG~~la~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~---~~~~~v~~~~~D~~~~~~v~~ 104 (179)
+...+..+++++||||+ +.||.+++.+|+..|++|+++..+-.+ --+..+.+.. .++.....+++++.+..+++.
T Consensus 389 p~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdA 468 (866)
T COG4982 389 PNGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDA 468 (866)
T ss_pred CCCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHH
Confidence 44556789999999998 889999999999999999998766442 2233334433 346678888999999999988
Q ss_pred HHHhh------------------CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHH
Q 030328 105 ALDEA------------------GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPL 156 (179)
Q Consensus 105 ~~~~~------------------~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 156 (179)
+++-. -.++.++-.|.+...+.+.+..++. +..+.+-+++..+++-.+.+.
T Consensus 469 lIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsra-E~~~rilLw~V~Rliggl~~~ 537 (866)
T COG4982 469 LIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRA-EFAMRILLWNVLRLIGGLKKQ 537 (866)
T ss_pred HHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchH-HHHHHHHHHHHHHHHHHhhhh
Confidence 87521 1357777778777666666655433 344566666666766655444
No 308
>PLN00106 malate dehydrogenase
Probab=98.09 E-value=2.3e-05 Score=61.42 Aligned_cols=105 Identities=13% Similarity=0.091 Sum_probs=66.5
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~i 112 (179)
...+++.|+|++|.+|.+++..|+.++. ++.++|.++. +....++.. ..... ...++++.+++.+.+ ...
T Consensus 16 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~--~g~a~Dl~~-~~~~~--~i~~~~~~~d~~~~l---~~a 87 (323)
T PLN00106 16 APGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANT--PGVAADVSH-INTPA--QVRGFLGDDQLGDAL---KGA 87 (323)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCC--CeeEchhhh-CCcCc--eEEEEeCCCCHHHHc---CCC
Confidence 4567999999999999999999997664 6999999772 111112211 11111 223433333333433 479
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHH
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAA 153 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 153 (179)
|++|+.||....+ .+.+++.+..|+.....+.+.+
T Consensus 88 DiVVitAG~~~~~------g~~R~dll~~N~~i~~~i~~~i 122 (323)
T PLN00106 88 DLVIIPAGVPRKP------GMTRDDLFNINAGIVKTLCEAV 122 (323)
T ss_pred CEEEEeCCCCCCC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999975431 1235567888888776666654
No 309
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=98.07 E-value=2.6e-05 Score=60.90 Aligned_cols=81 Identities=23% Similarity=0.291 Sum_probs=69.1
Q ss_pred EEEEEcCCCchHHHHHHHHHH----cCCeEEEEecChhHHHHHHHHHHhhc----CceEEEEEeeCCCHHHHHHHHHhhC
Q 030328 39 HVFITGGSSGIGLALAHQAAK----EGARVSILARSGEKLEEAKQSIQLAT----GIEVATYSADVRDFDAVKTALDEAG 110 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~----~g~~v~~~~r~~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~v~~~~~~~~ 110 (179)
-++|-||+|..|.-+..++.+ .|.+.-+..|+++++++..++..... ...+ .+.+|.+|++++++..+
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak--- 82 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAK--- 82 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHh---
Confidence 478999999999999999998 78889999999999999988876543 3344 78999999999999988
Q ss_pred CCcEEEecCCCCC
Q 030328 111 PVDVLVVNQGVFV 123 (179)
Q Consensus 111 ~id~li~~ag~~~ 123 (179)
...+++|++|+..
T Consensus 83 ~~~vivN~vGPyR 95 (423)
T KOG2733|consen 83 QARVIVNCVGPYR 95 (423)
T ss_pred hhEEEEeccccce
Confidence 4689999999753
No 310
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=98.05 E-value=5.2e-05 Score=52.89 Aligned_cols=76 Identities=24% Similarity=0.332 Sum_probs=54.5
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
.++++++|+|+ |++|.++++.|.+.| .+|.+++|++++.++..+++... . +..+..+.++ . ....|
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~-~-----~~~~~~~~~~---~---~~~~D 83 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL-G-----IAIAYLDLEE---L---LAEAD 83 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc-c-----cceeecchhh---c---cccCC
Confidence 56889999998 899999999999996 78999999988777666554321 0 1223333322 2 34789
Q ss_pred EEEecCCCCC
Q 030328 114 VLVVNQGVFV 123 (179)
Q Consensus 114 ~li~~ag~~~ 123 (179)
++|++.....
T Consensus 84 vvi~~~~~~~ 93 (155)
T cd01065 84 LIINTTPVGM 93 (155)
T ss_pred EEEeCcCCCC
Confidence 9999987543
No 311
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=98.02 E-value=4e-05 Score=58.35 Aligned_cols=120 Identities=18% Similarity=0.157 Sum_probs=83.4
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcE
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~ 114 (179)
..|-++=|.||+|.+|+-++.+|++.|-.|++-+|-.+......+-... -+++-+...|+.|+++++++++ +-++
T Consensus 59 ~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGd--LGQvl~~~fd~~DedSIr~vvk---~sNV 133 (391)
T KOG2865|consen 59 VSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGD--LGQVLFMKFDLRDEDSIRAVVK---HSNV 133 (391)
T ss_pred ccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccc--ccceeeeccCCCCHHHHHHHHH---hCcE
Confidence 3455778889999999999999999999999999866532222111111 2457888999999999999987 5689
Q ss_pred EEecCCCCCC-CCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccC
Q 030328 115 LVVNQGVFVP-GELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQA 175 (179)
Q Consensus 115 li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~ 175 (179)
+||-.|---+ +.+ +- -++|..++-.+.+.+-. .+..++|.+|+..
T Consensus 134 VINLIGrd~eTknf---~f------~Dvn~~~aerlAricke-------~GVerfIhvS~Lg 179 (391)
T KOG2865|consen 134 VINLIGRDYETKNF---SF------EDVNVHIAERLARICKE-------AGVERFIHVSCLG 179 (391)
T ss_pred EEEeeccccccCCc---cc------ccccchHHHHHHHHHHh-------hChhheeehhhcc
Confidence 9999884221 111 11 35677777776666522 2355788887654
No 312
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=98.02 E-value=3.8e-05 Score=61.54 Aligned_cols=127 Identities=20% Similarity=0.262 Sum_probs=77.9
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCH-HHHHHHHHhhC-CC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDF-DAVKTALDEAG-PV 112 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~~~-~i 112 (179)
.+...++|+||+|++|+-+.+.|.++|+.|.+..|+.++.+......... .....+..|.... +......+... ..
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d--~~~~~v~~~~~~~~d~~~~~~~~~~~~~ 154 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVD--LGLQNVEADVVTAIDILKKLVEAVPKGV 154 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccc--cccceeeeccccccchhhhhhhhccccc
Confidence 45678999999999999999999999999999999988776654411111 1122233333333 33344444432 23
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecccCcc
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQAGQ 177 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~~g~ 177 (179)
.+++-++|...... + ...-..+...|+.++.+++.. . +..+++++||+.+.
T Consensus 155 ~~v~~~~ggrp~~e--d-----~~~p~~VD~~g~knlvdA~~~----a---Gvk~~vlv~si~~~ 205 (411)
T KOG1203|consen 155 VIVIKGAGGRPEEE--D-----IVTPEKVDYEGTKNLVDACKK----A---GVKRVVLVGSIGGT 205 (411)
T ss_pred eeEEecccCCCCcc--c-----CCCcceecHHHHHHHHHHHHH----h---CCceEEEEEeecCc
Confidence 45666665433221 1 111235566777777887722 1 24489999887653
No 313
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=98.02 E-value=1.2e-05 Score=60.87 Aligned_cols=124 Identities=15% Similarity=0.151 Sum_probs=85.8
Q ss_pred cEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChhHH-HHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcE
Q 030328 38 RHVFITGGSSGIGLALAHQAAKE--GARVSILARSGEKL-EEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~--g~~v~~~~r~~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~ 114 (179)
+.++|||+.|.||...+..++.. .++.+.+|.-.-.. ....++.. ...+..++..|+.+...+.-+++.- ++|.
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~--n~p~ykfv~~di~~~~~~~~~~~~~-~id~ 83 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVR--NSPNYKFVEGDIADADLVLYLFETE-EIDT 83 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhc--cCCCceEeeccccchHHHHhhhccC-chhh
Confidence 89999999999999999999975 45555555422111 11222222 2466788999999988887777654 8999
Q ss_pred EEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEeccc
Q 030328 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSSQ 174 (179)
Q Consensus 115 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss~ 174 (179)
++|.|...+.....-.+ -...+.|+.++..+++...- -|+..++|.+|+.
T Consensus 84 vihfaa~t~vd~s~~~~----~~~~~nnil~t~~Lle~~~~------sg~i~~fvhvSTd 133 (331)
T KOG0747|consen 84 VIHFAAQTHVDRSFGDS----FEFTKNNILSTHVLLEAVRV------SGNIRRFVHVSTD 133 (331)
T ss_pred hhhhHhhhhhhhhcCch----HHHhcCCchhhhhHHHHHHh------ccCeeEEEEeccc
Confidence 99999866542211112 23367899999999988733 2356699999975
No 314
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=97.92 E-value=3.6e-05 Score=57.43 Aligned_cols=112 Identities=14% Similarity=0.116 Sum_probs=82.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHH-HH----hhcCceEEEEEeeCCCHHHHHHHHHhhCC
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQS-IQ----LATGIEVATYSADVRDFDAVKTALDEAGP 111 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~-~~----~~~~~~v~~~~~D~~~~~~v~~~~~~~~~ 111 (179)
.|++||||=+|.=|+-++..|+++|++|..+-|+........-+ +. ...+........|++|...+.+++... +
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i-k 106 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI-K 106 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc-C
Confidence 46899999999999999999999999999887766543322222 11 233667888899999999999998876 4
Q ss_pred CcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHH
Q 030328 112 VDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAA 153 (179)
Q Consensus 112 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 153 (179)
++=+.|-|+..+..-..++ .+.+-++.+.|++.++.+.
T Consensus 107 PtEiYnLaAQSHVkvSFdl----peYTAeVdavGtLRlLdAi 144 (376)
T KOG1372|consen 107 PTEVYNLAAQSHVKVSFDL----PEYTAEVDAVGTLRLLDAI 144 (376)
T ss_pred chhhhhhhhhcceEEEeec----ccceeeccchhhhhHHHHH
Confidence 5667777776665432222 2445678899999988765
No 315
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=97.90 E-value=8.4e-05 Score=62.13 Aligned_cols=47 Identities=34% Similarity=0.537 Sum_probs=41.2
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHH
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSI 81 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~ 81 (179)
.+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.++..+++
T Consensus 376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l 422 (529)
T PLN02520 376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV 422 (529)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 467899999999 69999999999999999999999988777665544
No 316
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.88 E-value=0.00018 Score=55.13 Aligned_cols=76 Identities=25% Similarity=0.326 Sum_probs=54.6
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcE
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~ 114 (179)
.++|+++|+|+ ||+|++++..|++.|++|.+++|++++.++..+++... + ..... + .++ . .....|+
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~-~-~~~~~--~---~~~---~--~~~~~Di 181 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY-G-EIQAF--S---MDE---L--PLHRVDL 181 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc-C-ceEEe--c---hhh---h--cccCccE
Confidence 46889999999 69999999999999999999999988877776665421 1 11211 1 111 1 1236899
Q ss_pred EEecCCCCC
Q 030328 115 LVVNQGVFV 123 (179)
Q Consensus 115 li~~ag~~~ 123 (179)
+||+.+...
T Consensus 182 vInatp~gm 190 (270)
T TIGR00507 182 IINATSAGM 190 (270)
T ss_pred EEECCCCCC
Confidence 999987643
No 317
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.86 E-value=4.5e-05 Score=59.94 Aligned_cols=116 Identities=16% Similarity=0.123 Sum_probs=63.4
Q ss_pred EEEEEcCCCchHHHHHHHHHHcC-------CeEEEEecChhH--HHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh
Q 030328 39 HVFITGGSSGIGLALAHQAAKEG-------ARVSILARSGEK--LEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA 109 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g-------~~v~~~~r~~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~ 109 (179)
+++||||+|.+|.+++..|..++ .++.++|+++.. ++....++.. -......|+....++.+.+
T Consensus 4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d----~~~~~~~~~~~~~~~~~~l--- 76 (325)
T cd01336 4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQD----CAFPLLKSVVATTDPEEAF--- 76 (325)
T ss_pred EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhh----ccccccCCceecCCHHHHh---
Confidence 58999999999999999999854 589999996531 1111111100 0001111332223333333
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEec
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMS 172 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~is 172 (179)
...|++|+.||..... ..+. .+.++.|+.= .+...+.+.+... ..+.++++|
T Consensus 77 ~~aDiVI~tAG~~~~~---~~~R---~~l~~~N~~i----~~~i~~~i~~~~~-~~~iiivvs 128 (325)
T cd01336 77 KDVDVAILVGAMPRKE---GMER---KDLLKANVKI----FKEQGEALDKYAK-KNVKVLVVG 128 (325)
T ss_pred CCCCEEEEeCCcCCCC---CCCH---HHHHHHHHHH----HHHHHHHHHHhCC-CCeEEEEec
Confidence 4799999999975432 1233 3346666643 3444444544421 123555554
No 318
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.85 E-value=5.2e-05 Score=62.01 Aligned_cols=80 Identities=23% Similarity=0.259 Sum_probs=53.0
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
.+++|+++|||+++ +|.+.|+.|+++|++|++.|++........+++.. .+.+ ....+ +..++ .+ .++|
T Consensus 2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~-~g~~--~~~~~--~~~~~---~~--~~~d 70 (447)
T PRK02472 2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE-EGIK--VICGS--HPLEL---LD--EDFD 70 (447)
T ss_pred CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh-cCCE--EEeCC--CCHHH---hc--CcCC
Confidence 35789999999975 99999999999999999999876443333333432 2332 22211 12221 22 1489
Q ss_pred EEEecCCCCCC
Q 030328 114 VLVVNQGVFVP 124 (179)
Q Consensus 114 ~li~~ag~~~~ 124 (179)
.+|+++|....
T Consensus 71 ~vV~s~gi~~~ 81 (447)
T PRK02472 71 LMVKNPGIPYT 81 (447)
T ss_pred EEEECCCCCCC
Confidence 99999997654
No 319
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.83 E-value=0.00087 Score=53.68 Aligned_cols=76 Identities=22% Similarity=0.288 Sum_probs=55.5
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcE
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~ 114 (179)
+..++++|.|+ |.+|+..++.+...|++|+++++++++.+...... +.. +..+..+.+++.+.++ ..|+
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~----g~~---v~~~~~~~~~l~~~l~---~aDv 233 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF----GGR---IHTRYSNAYEIEDAVK---RADL 233 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc----Cce---eEeccCCHHHHHHHHc---cCCE
Confidence 56778999988 79999999999999999999999987665443322 222 2234455666655544 6899
Q ss_pred EEecCCC
Q 030328 115 LVVNQGV 121 (179)
Q Consensus 115 li~~ag~ 121 (179)
+|++++.
T Consensus 234 VI~a~~~ 240 (370)
T TIGR00518 234 LIGAVLI 240 (370)
T ss_pred EEEcccc
Confidence 9998865
No 320
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.79 E-value=0.00017 Score=55.70 Aligned_cols=76 Identities=18% Similarity=0.189 Sum_probs=54.2
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~i 112 (179)
.+.+|+++|.|+ ||.|++++..|++.|+ +|++++|+.++.+...+++...... .... .. +++.+. ....
T Consensus 124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~-~~~~--~~---~~~~~~---~~~a 193 (284)
T PRK12549 124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPA-ARAT--AG---SDLAAA---LAAA 193 (284)
T ss_pred CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCC-eEEE--ec---cchHhh---hCCC
Confidence 357899999999 8899999999999997 6999999999888877776433221 1211 11 112222 2368
Q ss_pred cEEEecC
Q 030328 113 DVLVVNQ 119 (179)
Q Consensus 113 d~li~~a 119 (179)
|++||+.
T Consensus 194 DiVInaT 200 (284)
T PRK12549 194 DGLVHAT 200 (284)
T ss_pred CEEEECC
Confidence 9999994
No 321
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.78 E-value=0.00019 Score=55.33 Aligned_cols=79 Identities=15% Similarity=0.113 Sum_probs=54.9
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
+++|+++|.|+ ||.+++++..|++.|+ +|+++.|+.++.++..+++... ..+ ..+...+++.. .....|
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~--~~~----~~~~~~~~~~~---~~~~~D 192 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQV--GVI----TRLEGDSGGLA---IEKAAE 192 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhc--Ccc----eeccchhhhhh---cccCCC
Confidence 57899999998 9999999999999997 5999999998888777665321 111 11111122222 224689
Q ss_pred EEEecCCCCC
Q 030328 114 VLVVNQGVFV 123 (179)
Q Consensus 114 ~li~~ag~~~ 123 (179)
++||+.....
T Consensus 193 iVInaTp~g~ 202 (282)
T TIGR01809 193 VLVSTVPADV 202 (282)
T ss_pred EEEECCCCCC
Confidence 9999976543
No 322
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.76 E-value=0.00057 Score=52.73 Aligned_cols=80 Identities=19% Similarity=0.239 Sum_probs=55.2
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
.++|+++|.|| ||.+++++..|++.|+ ++++++|+.++.++..+.+....+.... ...+ ..++++.. ...|
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~-~~~~---~~~~~~~~---~~~d 196 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAV-VGVD---ARGIEDVI---AAAD 196 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceE-EecC---HhHHHHHH---hhcC
Confidence 56899999999 8999999999999997 5889999998888877765432222211 1122 22222222 2579
Q ss_pred EEEecCCCC
Q 030328 114 VLVVNQGVF 122 (179)
Q Consensus 114 ~li~~ag~~ 122 (179)
++||+....
T Consensus 197 ivINaTp~G 205 (283)
T PRK14027 197 GVVNATPMG 205 (283)
T ss_pred EEEEcCCCC
Confidence 999986543
No 323
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.75 E-value=0.00021 Score=54.94 Aligned_cols=79 Identities=25% Similarity=0.399 Sum_probs=56.2
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~i 112 (179)
..++++++|.|| ||.+++++..|++.|+ +++++.|+.++.++..+.+..... .+ ...+..+.+..+ ..
T Consensus 123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~-~~--~~~~~~~~~~~~-------~~ 191 (283)
T COG0169 123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA-AV--EAAALADLEGLE-------EA 191 (283)
T ss_pred ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-cc--cccccccccccc-------cc
Confidence 346899999999 8999999999999995 699999999998888877654321 11 112222222211 57
Q ss_pred cEEEecCCCCC
Q 030328 113 DVLVVNQGVFV 123 (179)
Q Consensus 113 d~li~~ag~~~ 123 (179)
|++||+.....
T Consensus 192 dliINaTp~Gm 202 (283)
T COG0169 192 DLLINATPVGM 202 (283)
T ss_pred CEEEECCCCCC
Confidence 99999876543
No 324
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=97.73 E-value=0.0011 Score=52.13 Aligned_cols=76 Identities=29% Similarity=0.401 Sum_probs=49.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh--CCCcE
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVDV 114 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~--~~id~ 114 (179)
++++||+||+||+|....+.....|++++++..++++.+ ..+++ +.+.. .|..+.+-.+++.+.. .++|+
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l----GAd~v---i~y~~~~~~~~v~~~t~g~gvDv 214 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL----GADHV---INYREEDFVEQVRELTGGKGVDV 214 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc----CCCEE---EcCCcccHHHHHHHHcCCCCceE
Confidence 999999999999999999999999988777777766554 33322 33321 2333322222222221 25788
Q ss_pred EEecCC
Q 030328 115 LVVNQG 120 (179)
Q Consensus 115 li~~ag 120 (179)
++...|
T Consensus 215 v~D~vG 220 (326)
T COG0604 215 VLDTVG 220 (326)
T ss_pred EEECCC
Confidence 877776
No 325
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.72 E-value=0.00049 Score=54.41 Aligned_cols=72 Identities=24% Similarity=0.406 Sum_probs=49.9
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecCh---------------------hHHHHHHHHHHhh-cCceE
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG---------------------EKLEEAKQSIQLA-TGIEV 89 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~---------------------~~~~~~~~~~~~~-~~~~v 89 (179)
..+++++|+|.|+ ||+|.++|+.|+..|. ++.++|++. .+.+...+.+... +..++
T Consensus 20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i 98 (338)
T PRK12475 20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEI 98 (338)
T ss_pred HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEE
Confidence 3578899999998 8899999999999997 688899874 1233333444332 35666
Q ss_pred EEEEeeCCCHHHHHHHH
Q 030328 90 ATYSADVRDFDAVKTAL 106 (179)
Q Consensus 90 ~~~~~D~~~~~~v~~~~ 106 (179)
..+..|++. +.+++++
T Consensus 99 ~~~~~~~~~-~~~~~~~ 114 (338)
T PRK12475 99 VPVVTDVTV-EELEELV 114 (338)
T ss_pred EEEeccCCH-HHHHHHh
Confidence 667767653 3444443
No 326
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.72 E-value=0.0011 Score=51.80 Aligned_cols=112 Identities=21% Similarity=0.273 Sum_probs=67.8
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhc---CceEEEEEeeCCCHHHHHHHHHhhCCC
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEG--ARVSILARSGEKLEEAKQSIQLAT---GIEVATYSADVRDFDAVKTALDEAGPV 112 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~v~~~~~~~~~i 112 (179)
+++.|.|+ |++|.++|..|+.+| .+++++|++++..+....++.... +...... . .+.+ .....
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~-------~l~~a 69 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYS-------DCKDA 69 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHH-------HhCCC
Confidence 36889997 899999999999999 479999999887776666654221 1222111 1 2222 12478
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEec
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMS 172 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~is 172 (179)
|++|+++|....+ .++..+ .++.|+.- .+...+.+.+... .+.++++|
T Consensus 70 DIVIitag~~~~~---g~~R~d---ll~~N~~i----~~~~~~~i~~~~~--~~~vivvs 117 (306)
T cd05291 70 DIVVITAGAPQKP---GETRLD---LLEKNAKI----MKSIVPKIKASGF--DGIFLVAS 117 (306)
T ss_pred CEEEEccCCCCCC---CCCHHH---HHHHHHHH----HHHHHHHHHHhCC--CeEEEEec
Confidence 9999999975432 123333 35555433 3444444444332 33555554
No 327
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=97.70 E-value=0.0004 Score=55.07 Aligned_cols=79 Identities=32% Similarity=0.347 Sum_probs=56.4
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh-hCCCc
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE-AGPVD 113 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~-~~~id 113 (179)
-+++.+||.||+||+|.+.+|-....|+..+++.++.+..+ .. +..|.+ ...|..+++-++++.+. .+++|
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~----k~lGAd---~vvdy~~~~~~e~~kk~~~~~~D 227 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LV----KKLGAD---EVVDYKDENVVELIKKYTGKGVD 227 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HH----HHcCCc---EeecCCCHHHHHHHHhhcCCCcc
Confidence 46889999999999999999999999955566666555443 22 223443 34577776555555443 56899
Q ss_pred EEEecCCC
Q 030328 114 VLVVNQGV 121 (179)
Q Consensus 114 ~li~~ag~ 121 (179)
+++-+.|.
T Consensus 228 vVlD~vg~ 235 (347)
T KOG1198|consen 228 VVLDCVGG 235 (347)
T ss_pred EEEECCCC
Confidence 99999886
No 328
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=97.68 E-value=0.00036 Score=54.86 Aligned_cols=43 Identities=21% Similarity=0.275 Sum_probs=36.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHHHHHH
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLEEAKQ 79 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~ 79 (179)
+.+++|+||+|++|.+.++.+...|+ +|+++++++++.+...+
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~ 198 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKS 198 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 38999999999999999998889999 79999988776554443
No 329
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=97.66 E-value=0.00076 Score=52.16 Aligned_cols=82 Identities=23% Similarity=0.327 Sum_probs=52.1
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChh---HHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGE---KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA 109 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~---~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~ 109 (179)
.+++|+++|.|| ||-+++++..|++.|+ +++++.|+++ +.++..+++....+..+.. .+. ++.+.+.+..
T Consensus 121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~--~~~---~~~~~l~~~~ 194 (288)
T PRK12749 121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTV--TDL---ADQQAFAEAL 194 (288)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEE--ech---hhhhhhhhhc
Confidence 468899999998 6669999999999996 5889999853 5555555543222222222 122 1111122233
Q ss_pred CCCcEEEecCCC
Q 030328 110 GPVDVLVVNQGV 121 (179)
Q Consensus 110 ~~id~li~~ag~ 121 (179)
...|++||+...
T Consensus 195 ~~aDivINaTp~ 206 (288)
T PRK12749 195 ASADILTNGTKV 206 (288)
T ss_pred ccCCEEEECCCC
Confidence 468999998654
No 330
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.65 E-value=0.00072 Score=49.56 Aligned_cols=83 Identities=23% Similarity=0.360 Sum_probs=56.3
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecCh-------------------hHHHHHHHHHHh-hcCceEEE
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG-------------------EKLEEAKQSIQL-ATGIEVAT 91 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~-~~~~~v~~ 91 (179)
..+.+++++|.|+ ||+|..+++.|+..|. ++.++|.+. .+.+...+.+.. .+..++..
T Consensus 17 ~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~ 95 (202)
T TIGR02356 17 QRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTA 95 (202)
T ss_pred HHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence 4578899999997 8999999999999997 688998872 233444444433 23445555
Q ss_pred EEeeCCCHHHHHHHHHhhCCCcEEEecCC
Q 030328 92 YSADVRDFDAVKTALDEAGPVDVLVVNQG 120 (179)
Q Consensus 92 ~~~D~~~~~~v~~~~~~~~~id~li~~ag 120 (179)
+..++++ +++++.++ ..|++|.+..
T Consensus 96 ~~~~i~~-~~~~~~~~---~~D~Vi~~~d 120 (202)
T TIGR02356 96 LKERVTA-ENLELLIN---NVDLVLDCTD 120 (202)
T ss_pred ehhcCCH-HHHHHHHh---CCCEEEECCC
Confidence 5555543 44555544 6788887764
No 331
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=97.63 E-value=0.00093 Score=51.39 Aligned_cols=78 Identities=22% Similarity=0.322 Sum_probs=58.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHH-hh-CCCc
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALD-EA-GPVD 113 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~-~~-~~id 113 (179)
.|++++|++|+|..|.-..+--.-+|++|+.+...+++..-..+++ +.+. ..|..+. ++.+.++ .. ..+|
T Consensus 150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l----GfD~---~idyk~~-d~~~~L~~a~P~GID 221 (340)
T COG2130 150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL----GFDA---GIDYKAE-DFAQALKEACPKGID 221 (340)
T ss_pred CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc----CCce---eeecCcc-cHHHHHHHHCCCCeE
Confidence 5999999999999999888887789999999999998877666655 3332 2344444 4444443 33 4799
Q ss_pred EEEecCCC
Q 030328 114 VLVVNQGV 121 (179)
Q Consensus 114 ~li~~ag~ 121 (179)
+.+-|.|.
T Consensus 222 vyfeNVGg 229 (340)
T COG2130 222 VYFENVGG 229 (340)
T ss_pred EEEEcCCc
Confidence 99999984
No 332
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.63 E-value=0.00019 Score=55.20 Aligned_cols=76 Identities=21% Similarity=0.358 Sum_probs=54.6
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~i 112 (179)
.+++|+++|+|+ ||+|++++..|.+.| .+|++++|+.++.++..+++... . .+.+ +. +.. +.....
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~-~-~~~~---~~----~~~---~~~~~~ 186 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGAL-G-KAEL---DL----ELQ---EELADF 186 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc-c-ceee---cc----cch---hccccC
Confidence 468899999998 899999999999999 78999999998887776665321 1 1111 11 111 222468
Q ss_pred cEEEecCCCC
Q 030328 113 DVLVVNQGVF 122 (179)
Q Consensus 113 d~li~~ag~~ 122 (179)
|++||+....
T Consensus 187 DivInaTp~g 196 (278)
T PRK00258 187 DLIINATSAG 196 (278)
T ss_pred CEEEECCcCC
Confidence 9999987544
No 333
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.63 E-value=0.00063 Score=50.73 Aligned_cols=75 Identities=24% Similarity=0.416 Sum_probs=55.9
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEe
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~ 117 (179)
+.++|.|+ |.+|..+|+.|.++|++|++++++++..++...+ ......+.+|-++++-++++ .....|+++-
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~-----~~~~~~v~gd~t~~~~L~~a--gi~~aD~vva 72 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD-----ELDTHVVIGDATDEDVLEEA--GIDDADAVVA 72 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh-----hcceEEEEecCCCHHHHHhc--CCCcCCEEEE
Confidence 46788888 8999999999999999999999999877653331 13456788899988766554 1235677766
Q ss_pred cCC
Q 030328 118 NQG 120 (179)
Q Consensus 118 ~ag 120 (179)
..|
T Consensus 73 ~t~ 75 (225)
T COG0569 73 ATG 75 (225)
T ss_pred eeC
Confidence 555
No 334
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.62 E-value=0.00044 Score=56.10 Aligned_cols=76 Identities=14% Similarity=0.275 Sum_probs=54.1
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~i 112 (179)
++.+++++|.|+ |++|++++..|++.|+ +++++.|+.++.+...+++. ... . ...+++.+.+ ...
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~---~~~--~-----~~~~~l~~~l---~~a 243 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR---NAS--A-----HYLSELPQLI---KKA 243 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc---CCe--E-----ecHHHHHHHh---ccC
Confidence 468899999999 9999999999999996 58899999887766655442 111 1 1123333333 367
Q ss_pred cEEEecCCCCC
Q 030328 113 DVLVVNQGVFV 123 (179)
Q Consensus 113 d~li~~ag~~~ 123 (179)
|++|++.+..+
T Consensus 244 DiVI~aT~a~~ 254 (414)
T PRK13940 244 DIIIAAVNVLE 254 (414)
T ss_pred CEEEECcCCCC
Confidence 99999887643
No 335
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.60 E-value=0.00025 Score=52.35 Aligned_cols=84 Identities=15% Similarity=0.281 Sum_probs=56.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCe---EEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGAR---VSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~---v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
.++++|||++|-+|+|+.+.+.++|.. .+.... -.+|+++.++.+++|++-.+ -
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s----------------------kd~DLt~~a~t~~lF~~ekP-t 57 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS----------------------KDADLTNLADTRALFESEKP-T 57 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc----------------------ccccccchHHHHHHHhccCC-c
Confidence 378999999999999999999999862 222111 24799999999999988754 4
Q ss_pred EEEecCCCCC-CCCcccCCHHHHHHHHHhhh
Q 030328 114 VLVVNQGVFV-PGELEVQSLDEVRLMIDVNI 143 (179)
Q Consensus 114 ~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~ 143 (179)
.+|+.|+..+ --.-...+.+.|...+++|-
T Consensus 58 hVIhlAAmVGGlf~N~~ynldF~r~Nl~ind 88 (315)
T KOG1431|consen 58 HVIHLAAMVGGLFHNNTYNLDFIRKNLQIND 88 (315)
T ss_pred eeeehHhhhcchhhcCCCchHHHhhcceech
Confidence 4566554332 11112235566666666654
No 336
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.59 E-value=0.00052 Score=53.05 Aligned_cols=72 Identities=21% Similarity=0.352 Sum_probs=50.6
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCC
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPV 112 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~i 112 (179)
.++++++++|.|+ |++|+++|+.|...|++|++++|++++.+...+ .+.. . . ..+++.+.+ ...
T Consensus 147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~-----~g~~--~--~---~~~~l~~~l---~~a 210 (287)
T TIGR02853 147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITE-----MGLI--P--F---PLNKLEEKV---AEI 210 (287)
T ss_pred CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----CCCe--e--e---cHHHHHHHh---ccC
Confidence 3678999999999 779999999999999999999998765433211 1211 1 1 123344444 368
Q ss_pred cEEEecCC
Q 030328 113 DVLVVNQG 120 (179)
Q Consensus 113 d~li~~ag 120 (179)
|++||+..
T Consensus 211 DiVint~P 218 (287)
T TIGR02853 211 DIVINTIP 218 (287)
T ss_pred CEEEECCC
Confidence 99999763
No 337
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=97.59 E-value=0.00081 Score=52.57 Aligned_cols=42 Identities=21% Similarity=0.287 Sum_probs=36.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEA 77 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~ 77 (179)
.+.+++|+|++|++|...++.+...|++|+.+++++++.+..
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~ 179 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL 179 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 588999999999999999999999999999999887765443
No 338
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=97.58 E-value=0.00056 Score=49.44 Aligned_cols=76 Identities=26% Similarity=0.376 Sum_probs=44.9
Q ss_pred CCcEEEEEc----------------CCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCH
Q 030328 36 KDRHVFITG----------------GSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDF 99 (179)
Q Consensus 36 ~~k~vlItG----------------a~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 99 (179)
+||++|||+ +||.+|.++|+++..+|++|+++..... .+. ...+.. .++.+.
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~---------p~~~~~--i~v~sa 69 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP---------PPGVKV--IRVESA 69 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------TTEEE--EE-SSH
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc---------cccceE--EEecch
Confidence 566777765 4788999999999999999999888742 110 123333 345555
Q ss_pred HHHHHHH-HhhCCCcEEEecCCCCC
Q 030328 100 DAVKTAL-DEAGPVDVLVVNQGVFV 123 (179)
Q Consensus 100 ~~v~~~~-~~~~~id~li~~ag~~~ 123 (179)
++..+.+ +.....|++|++|++..
T Consensus 70 ~em~~~~~~~~~~~Di~I~aAAVsD 94 (185)
T PF04127_consen 70 EEMLEAVKELLPSADIIIMAAAVSD 94 (185)
T ss_dssp HHHHHHHHHHGGGGSEEEE-SB--S
T ss_pred hhhhhhhccccCcceeEEEecchhh
Confidence 6655443 33445699999998765
No 339
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=97.55 E-value=0.00097 Score=52.44 Aligned_cols=43 Identities=30% Similarity=0.371 Sum_probs=37.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAK 78 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~ 78 (179)
.|.+++|+||+|++|..+++.+...|++|+.+++++++.+...
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~ 193 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLK 193 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 6899999999999999999999999999999998877655443
No 340
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.54 E-value=0.00032 Score=51.36 Aligned_cols=48 Identities=21% Similarity=0.323 Sum_probs=41.4
Q ss_pred CcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHH
Q 030328 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQS 80 (179)
Q Consensus 32 ~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~ 80 (179)
..++++|+++|+|.+ .+|+.+|+.|.+.|++|++.|+++++.++..++
T Consensus 23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~ 70 (200)
T cd01075 23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL 70 (200)
T ss_pred CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 345799999999994 899999999999999999999998877665554
No 341
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=97.52 E-value=0.0011 Score=51.63 Aligned_cols=75 Identities=29% Similarity=0.417 Sum_probs=51.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEE
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~l 115 (179)
.+.+++|+|+++++|+++++.+...|++|+++.+++++.+.. ++ .+.. .. .|..+ +.+.+++..++|++
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~----~~~~-~~--~~~~~---~~~~~~~~~~~d~v 230 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KE----LGAD-YV--IDGSK---FSEDVKKLGGADVV 230 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HH----cCCc-EE--EecHH---HHHHHHhccCCCEE
Confidence 578999999999999999999999999999999887655443 21 1221 11 12211 33333444468999
Q ss_pred EecCCC
Q 030328 116 VVNQGV 121 (179)
Q Consensus 116 i~~ag~ 121 (179)
++++|.
T Consensus 231 ~~~~g~ 236 (332)
T cd08259 231 IELVGS 236 (332)
T ss_pred EECCCh
Confidence 988764
No 342
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=97.52 E-value=0.0012 Score=52.35 Aligned_cols=42 Identities=26% Similarity=0.331 Sum_probs=36.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEA 77 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~ 77 (179)
.+.+++|.|++|++|...++.+...|++|+.+++++++.+..
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~ 199 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLL 199 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 588999999999999999999999999999998887765543
No 343
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=97.51 E-value=0.0013 Score=51.80 Aligned_cols=41 Identities=37% Similarity=0.474 Sum_probs=36.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEA 77 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~ 77 (179)
.+++++|+|++ |+|....+.....|++|+++++++++.+..
T Consensus 166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a 206 (339)
T COG1064 166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELA 206 (339)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHH
Confidence 59999999997 999998888888999999999999876533
No 344
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=97.51 E-value=0.0011 Score=52.15 Aligned_cols=99 Identities=18% Similarity=0.121 Sum_probs=59.6
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHH-HH-------H
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGA-------RVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFD-AV-------K 103 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~v-------~ 103 (179)
++.|+||+|.+|.+++..|+.+|. .++++|++++... ......|+.+.. .. .
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~-------------a~g~~~Dl~d~~~~~~~~~~~~~ 67 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKV-------------LEGVVMELMDCAFPLLDGVVPTH 67 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccc-------------cceeEeehhcccchhcCceeccC
Confidence 478999999999999999998653 5899998654210 111223333322 00 0
Q ss_pred HHHHhhCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhc
Q 030328 104 TALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKR 160 (179)
Q Consensus 104 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 160 (179)
...+.....|++|+.||....+ .+++.+.++.|+.- .+...+.+.+.
T Consensus 68 ~~~~~~~~aDiVVitAG~~~~~------~~tr~~ll~~N~~i----~k~i~~~i~~~ 114 (324)
T TIGR01758 68 DPAVAFTDVDVAILVGAFPRKE------GMERRDLLSKNVKI----FKEQGRALDKL 114 (324)
T ss_pred ChHHHhCCCCEEEEcCCCCCCC------CCcHHHHHHHHHHH----HHHHHHHHHhh
Confidence 1123445799999999975431 12245567777644 44455555554
No 345
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=97.50 E-value=0.00044 Score=53.72 Aligned_cols=78 Identities=22% Similarity=0.305 Sum_probs=62.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEE
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLV 116 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li 116 (179)
-...+|-||+|..|.-+|++|++.|.+-.+..|+..+++...+++. .+...++++ +++.+++..+ ..++|+
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG----~~~~~~p~~--~p~~~~~~~~---~~~VVl 76 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG----PEAAVFPLG--VPAALEAMAS---RTQVVL 76 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC----ccccccCCC--CHHHHHHHHh---cceEEE
Confidence 3468899999999999999999999999999999999888877663 333334443 3777777666 689999
Q ss_pred ecCCCCC
Q 030328 117 VNQGVFV 123 (179)
Q Consensus 117 ~~ag~~~ 123 (179)
|++|+..
T Consensus 77 ncvGPyt 83 (382)
T COG3268 77 NCVGPYT 83 (382)
T ss_pred ecccccc
Confidence 9999754
No 346
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.50 E-value=0.0051 Score=48.24 Aligned_cols=77 Identities=19% Similarity=0.310 Sum_probs=54.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhcC--ceEEEEEeeCCCHHHHHHHHHhhCC
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGEKLEEAKQSIQLATG--IEVATYSADVRDFDAVKTALDEAGP 111 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~v~~~~~~~~~ 111 (179)
.++++.|+|+ |.+|.++|..++.+|. ++.++|++++.++....++..... ..+.. .. .+. +....
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i-~~--~~~-------~~~~~ 73 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKI-YA--GDY-------SDCKD 73 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEE-Ee--CCH-------HHhCC
Confidence 5679999998 9999999999999886 699999998877666666643211 12222 11 221 22347
Q ss_pred CcEEEecCCCCC
Q 030328 112 VDVLVVNQGVFV 123 (179)
Q Consensus 112 id~li~~ag~~~ 123 (179)
.|++|..||...
T Consensus 74 adivIitag~~~ 85 (315)
T PRK00066 74 ADLVVITAGAPQ 85 (315)
T ss_pred CCEEEEecCCCC
Confidence 899999999754
No 347
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=97.48 E-value=0.00093 Score=51.37 Aligned_cols=78 Identities=33% Similarity=0.429 Sum_probs=52.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh--hCCCc
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--AGPVD 113 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~--~~~id 113 (179)
.+++++|+|+++++|.++++.+...|+++++++++++..+.. +++ +.+ ...|..+.+..+++.+. .+++|
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~----g~~---~~~~~~~~~~~~~~~~~~~~~~~d 210 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL----GAD---VAINYRTEDFAEEVKEATGGRGVD 210 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc----CCC---EEEeCCchhHHHHHHHHhCCCCeE
Confidence 578999999999999999999999999999999987665543 222 222 12333333333333222 13688
Q ss_pred EEEecCCC
Q 030328 114 VLVVNQGV 121 (179)
Q Consensus 114 ~li~~ag~ 121 (179)
.+++++|.
T Consensus 211 ~vi~~~g~ 218 (323)
T cd05276 211 VILDMVGG 218 (323)
T ss_pred EEEECCch
Confidence 88888763
No 348
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=97.48 E-value=0.0014 Score=50.91 Aligned_cols=77 Identities=35% Similarity=0.451 Sum_probs=55.1
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh--CCCc
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~--~~id 113 (179)
.+++++|+|+++++|.++++.+...|++++++++++++.+.. .+. +.. ...|..+.+..+.+.+.. +++|
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~d 237 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KEL----GAD---YVIDYRKEDFVREVRELTGKRGVD 237 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc----CCC---eEEecCChHHHHHHHHHhCCCCCc
Confidence 578999999999999999999999999999999987765433 211 222 123555554444444332 3689
Q ss_pred EEEecCC
Q 030328 114 VLVVNQG 120 (179)
Q Consensus 114 ~li~~ag 120 (179)
++++++|
T Consensus 238 ~~i~~~g 244 (342)
T cd08266 238 VVVEHVG 244 (342)
T ss_pred EEEECCc
Confidence 9999887
No 349
>PRK05086 malate dehydrogenase; Provisional
Probab=97.47 E-value=0.00078 Score=52.71 Aligned_cols=101 Identities=18% Similarity=0.153 Sum_probs=55.9
Q ss_pred cEEEEEcCCCchHHHHHHHHHH-c--CCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcE
Q 030328 38 RHVFITGGSSGIGLALAHQAAK-E--GARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~-~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~ 114 (179)
++++|.||+|++|.+++..+.. . +..+.+.++++. .+...-++. ...... .+.. .+.+++.+. ....|+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~-~~~~~~-~i~~--~~~~d~~~~---l~~~Di 72 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLS-HIPTAV-KIKG--FSGEDPTPA---LEGADV 72 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-Ccceehhhh-cCCCCc-eEEE--eCCCCHHHH---cCCCCE
Confidence 4789999999999999998865 2 346788888743 211111111 101111 1222 111222222 236999
Q ss_pred EEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHH
Q 030328 115 LVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKA 152 (179)
Q Consensus 115 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 152 (179)
+|.++|..+.+. .++ ...+..|+...-.+.+.
T Consensus 73 VIitaG~~~~~~---~~R---~dll~~N~~i~~~ii~~ 104 (312)
T PRK05086 73 VLISAGVARKPG---MDR---SDLFNVNAGIVKNLVEK 104 (312)
T ss_pred EEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHH
Confidence 999999865432 222 23466676555554444
No 350
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=97.44 E-value=0.0012 Score=51.36 Aligned_cols=42 Identities=21% Similarity=0.291 Sum_probs=36.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEA 77 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~ 77 (179)
.+.+++|.||+|++|.++++.+...|++|+.+++++++.+..
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l 184 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL 184 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 588999999999999999999999999999999887765443
No 351
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.44 E-value=0.0021 Score=50.86 Aligned_cols=37 Identities=30% Similarity=0.586 Sum_probs=33.4
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecCh
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSG 71 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~ 71 (179)
.+.+++|+|.|+ ||+|..++..|+..|. ++.++|.+.
T Consensus 21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 578899999999 8999999999999998 799999863
No 352
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.43 E-value=0.0012 Score=47.43 Aligned_cols=47 Identities=28% Similarity=0.212 Sum_probs=38.7
Q ss_pred CCCCCcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHH
Q 030328 28 PKPVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLE 75 (179)
Q Consensus 28 ~~~~~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~ 75 (179)
.......+.++++.|.|. |.||+++|+.+...|++|+..+|+....+
T Consensus 27 ~~~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~ 73 (178)
T PF02826_consen 27 ERFPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE 73 (178)
T ss_dssp TTTTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred cCCCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence 344445689999999998 99999999999999999999999887544
No 353
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.42 E-value=0.0018 Score=50.91 Aligned_cols=108 Identities=18% Similarity=0.206 Sum_probs=63.0
Q ss_pred EEEEEcCCCchHHHHHHHHHHcC-C------eEEEEecCh--hHHHHHHHHHHhhcCceEEEEEeeCCCHH-------HH
Q 030328 39 HVFITGGSSGIGLALAHQAAKEG-A------RVSILARSG--EKLEEAKQSIQLATGIEVATYSADVRDFD-------AV 102 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g-~------~v~~~~r~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-------~v 102 (179)
++.|+||+|.+|..++..|+.+| + .+.++|+++ +.++. ...|+.+.. .+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g---------------~~~Dl~d~~~~~~~~~~i 66 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEG---------------VVMELQDCAFPLLKGVVI 66 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccce---------------eeeehhhhcccccCCcEE
Confidence 58999999999999999999765 2 489999976 32221 122333221 00
Q ss_pred -HHHHHhhCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEec
Q 030328 103 -KTALDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMS 172 (179)
Q Consensus 103 -~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~is 172 (179)
....+.....|++|+.||....+ ..+..+ .++.|+. +.+...+.+.+... ....++++|
T Consensus 67 ~~~~~~~~~~aDiVVitAG~~~~~---g~tR~d---ll~~N~~----i~~~i~~~i~~~~~-~~~iiivvs 126 (323)
T cd00704 67 TTDPEEAFKDVDVAILVGAFPRKP---GMERAD---LLRKNAK----IFKEQGEALNKVAK-PTVKVLVVG 126 (323)
T ss_pred ecChHHHhCCCCEEEEeCCCCCCc---CCcHHH---HHHHhHH----HHHHHHHHHHHhCC-CCeEEEEeC
Confidence 11223345799999999975432 123333 4555553 44555566655421 123555553
No 354
>PRK14968 putative methyltransferase; Provisional
Probab=97.40 E-value=0.0053 Score=43.93 Aligned_cols=78 Identities=27% Similarity=0.244 Sum_probs=52.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCce--EEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIE--VATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~--v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
.+++++-.|++.|. ++..+++++.+++.++.+++..+...+.+....-.. +.+..+|..+. +.+ ..+|
T Consensus 23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~~~--~~~d 92 (188)
T PRK14968 23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP-----FRG--DKFD 92 (188)
T ss_pred CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc-----ccc--cCce
Confidence 57789999988776 566666668999999999887766655554322111 66777776432 112 2689
Q ss_pred EEEecCCCCC
Q 030328 114 VLVVNQGVFV 123 (179)
Q Consensus 114 ~li~~ag~~~ 123 (179)
.++.|.....
T Consensus 93 ~vi~n~p~~~ 102 (188)
T PRK14968 93 VILFNPPYLP 102 (188)
T ss_pred EEEECCCcCC
Confidence 9998876544
No 355
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.40 E-value=0.0042 Score=42.40 Aligned_cols=79 Identities=23% Similarity=0.430 Sum_probs=56.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecCh-------------------hHHHHHHHHHHh-hcCceEEEEEee
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSG-------------------EKLEEAKQSIQL-ATGIEVATYSAD 95 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~~-------------------~~~~~~~~~~~~-~~~~~v~~~~~D 95 (179)
+++++|.|+ |++|..+++.|+..|.. +.++|.+. .+.+...+.+.. .+..++..+..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 678999999 89999999999999985 88887752 134444555543 346778888888
Q ss_pred CCCHHHHHHHHHhhCCCcEEEecCC
Q 030328 96 VRDFDAVKTALDEAGPVDVLVVNQG 120 (179)
Q Consensus 96 ~~~~~~v~~~~~~~~~id~li~~ag 120 (179)
+ +.+..+++++ ..|++|.+..
T Consensus 81 ~-~~~~~~~~~~---~~d~vi~~~d 101 (135)
T PF00899_consen 81 I-DEENIEELLK---DYDIVIDCVD 101 (135)
T ss_dssp C-SHHHHHHHHH---TSSEEEEESS
T ss_pred c-cccccccccc---CCCEEEEecC
Confidence 7 3455666665 5798888764
No 356
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=97.39 E-value=0.0069 Score=41.78 Aligned_cols=112 Identities=21% Similarity=0.253 Sum_probs=67.8
Q ss_pred EEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhh--c-CceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 39 HVFITGGSSGIGLALAHQAAKEG--ARVSILARSGEKLEEAKQSIQLA--T-GIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~--~-~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
++.|+||+|.+|.++|..|..++ .+++++|++++.++....++... . ........ .+. +.....|
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~-------~~~~~aD 71 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDY-------EALKDAD 71 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSG-------GGGTTES
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccc-------ccccccc
Confidence 68899999999999999999887 45999999988776666655421 1 12222222 222 2344789
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEec
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMS 172 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~is 172 (179)
++|..+|....+ ..+..+ .++.|+.-. +...+.+.+... ...++.+|
T Consensus 72 ivvitag~~~~~---g~sR~~---ll~~N~~i~----~~~~~~i~~~~p--~~~vivvt 118 (141)
T PF00056_consen 72 IVVITAGVPRKP---GMSRLD---LLEANAKIV----KEIAKKIAKYAP--DAIVIVVT 118 (141)
T ss_dssp EEEETTSTSSST---TSSHHH---HHHHHHHHH----HHHHHHHHHHST--TSEEEE-S
T ss_pred EEEEeccccccc---cccHHH---HHHHhHhHH----HHHHHHHHHhCC--ccEEEEeC
Confidence 999999975421 123333 356565443 444444444432 23555543
No 357
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=97.38 E-value=0.0016 Score=50.10 Aligned_cols=78 Identities=28% Similarity=0.323 Sum_probs=53.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh--hCCCc
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--AGPVD 113 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~--~~~id 113 (179)
.+++++|+|+++++|.++++.+...|++|+++++++++.+... ++ +.+. ..|..+.+..+++.+. .+.+|
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~----g~~~---~~~~~~~~~~~~~~~~~~~~~~d 215 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA----GADA---VFNYRAEDLADRILAATAGQGVD 215 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc----CCCE---EEeCCCcCHHHHHHHHcCCCceE
Confidence 5899999999999999999999999999999999876554432 11 2221 2344443333333322 23689
Q ss_pred EEEecCCC
Q 030328 114 VLVVNQGV 121 (179)
Q Consensus 114 ~li~~ag~ 121 (179)
.+++++|.
T Consensus 216 ~vi~~~~~ 223 (325)
T cd08253 216 VIIEVLAN 223 (325)
T ss_pred EEEECCch
Confidence 99988653
No 358
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=97.34 E-value=0.00076 Score=51.23 Aligned_cols=75 Identities=17% Similarity=0.206 Sum_probs=54.8
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEe
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~ 117 (179)
++++|+||++- |+.++++|.++|++|++..+++...+...+ .+ ...+..+.-+.+++.+++++. ++|++|+
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~-----~g--~~~v~~g~l~~~~l~~~l~~~-~i~~VID 71 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI-----HQ--ALTVHTGALDPQELREFLKRH-SIDILVD 71 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc-----cC--CceEEECCCCHHHHHHHHHhc-CCCEEEE
Confidence 46999999988 999999999999999998888764332211 11 122445666777787777665 5899998
Q ss_pred cCCC
Q 030328 118 NQGV 121 (179)
Q Consensus 118 ~ag~ 121 (179)
.+.+
T Consensus 72 AtHP 75 (256)
T TIGR00715 72 ATHP 75 (256)
T ss_pred cCCH
Confidence 8764
No 359
>PRK06849 hypothetical protein; Provisional
Probab=97.34 E-value=0.0029 Score=51.00 Aligned_cols=79 Identities=19% Similarity=0.210 Sum_probs=51.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCH----HHHHHHHHhhCC
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDF----DAVKTALDEAGP 111 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~----~~v~~~~~~~~~ 111 (179)
+.|+|||||++..+|.++++.|.+.|++|++++.++.......... .....++..-.+. +.+.++.++. +
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~-----d~~~~~p~p~~d~~~~~~~L~~i~~~~-~ 76 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV-----DGFYTIPSPRWDPDAYIQALLSIVQRE-N 76 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh-----hheEEeCCCCCCHHHHHHHHHHHHHHc-C
Confidence 4689999999999999999999999999999999865443222211 1111222122333 2233444444 5
Q ss_pred CcEEEecCC
Q 030328 112 VDVLVVNQG 120 (179)
Q Consensus 112 id~li~~ag 120 (179)
+|++|-...
T Consensus 77 id~vIP~~e 85 (389)
T PRK06849 77 IDLLIPTCE 85 (389)
T ss_pred CCEEEECCh
Confidence 898887664
No 360
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.33 E-value=0.0011 Score=51.18 Aligned_cols=43 Identities=23% Similarity=0.356 Sum_probs=36.8
Q ss_pred CcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHH
Q 030328 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKL 74 (179)
Q Consensus 32 ~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~ 74 (179)
..+++||+++|.|+++-.|+.++..|.++|++|.++.|+.+.+
T Consensus 154 ~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L 196 (283)
T PRK14192 154 NIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNL 196 (283)
T ss_pred CCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhH
Confidence 3467999999999987799999999999999999888854433
No 361
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.32 E-value=0.002 Score=50.09 Aligned_cols=41 Identities=32% Similarity=0.444 Sum_probs=36.4
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHH
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKL 74 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~ 74 (179)
.++++++++|.|+ |++|+.+++.|...|++|.+++|+++..
T Consensus 148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~ 188 (296)
T PRK08306 148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL 188 (296)
T ss_pred CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 4568999999998 7799999999999999999999997653
No 362
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=97.32 E-value=0.0022 Score=48.22 Aligned_cols=77 Identities=32% Similarity=0.451 Sum_probs=51.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHH-HHhhCCCcE
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTA-LDEAGPVDV 114 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~-~~~~~~id~ 114 (179)
.+++++|+|+++ +|+++++.+...|.+|+++++++++.+.. ++. +.... .|..+.+...++ ....+++|+
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~----g~~~~---~~~~~~~~~~~~~~~~~~~~d~ 204 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL----GADHV---IDYKEEDLEEELRLTGGGGADV 204 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh----CCcee---ccCCcCCHHHHHHHhcCCCCCE
Confidence 678999999988 99999999999999999999987655433 221 22211 232222222222 222357999
Q ss_pred EEecCCC
Q 030328 115 LVVNQGV 121 (179)
Q Consensus 115 li~~ag~ 121 (179)
++++++.
T Consensus 205 vi~~~~~ 211 (271)
T cd05188 205 VIDAVGG 211 (271)
T ss_pred EEECCCC
Confidence 9999873
No 363
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.31 E-value=0.003 Score=50.75 Aligned_cols=36 Identities=22% Similarity=0.422 Sum_probs=31.9
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARS 70 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~ 70 (179)
.+++++++|.|+ ||+|..+++.|+..|. ++.++|++
T Consensus 132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 467889999988 8999999999999997 48899887
No 364
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=97.25 E-value=0.0028 Score=49.39 Aligned_cols=42 Identities=26% Similarity=0.283 Sum_probs=36.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEA 77 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~ 77 (179)
.+.+++|.|+++++|.++++.+...|++|+.+++++++.+..
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~ 186 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWL 186 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 578999999999999999999999999999999887665443
No 365
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.24 E-value=0.0054 Score=45.32 Aligned_cols=81 Identities=20% Similarity=0.335 Sum_probs=54.7
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecCh------------------hHHHHHHHHHHh-hcCceEEEEE
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSG------------------EKLEEAKQSIQL-ATGIEVATYS 93 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~~------------------~~~~~~~~~~~~-~~~~~v~~~~ 93 (179)
.+++++++|.|+ ||+|..+++.|+..|.. +.++|.+. .+.+...+.+.. .+..++..+.
T Consensus 25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~ 103 (212)
T PRK08644 25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN 103 (212)
T ss_pred HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence 478899999998 89999999999999976 88888872 123333333432 2345666666
Q ss_pred eeCCCHHHHHHHHHhhCCCcEEEecC
Q 030328 94 ADVRDFDAVKTALDEAGPVDVLVVNQ 119 (179)
Q Consensus 94 ~D~~~~~~v~~~~~~~~~id~li~~a 119 (179)
..+++ +.+++.++ ..|++|.+.
T Consensus 104 ~~i~~-~~~~~~~~---~~DvVI~a~ 125 (212)
T PRK08644 104 EKIDE-DNIEELFK---DCDIVVEAF 125 (212)
T ss_pred eecCH-HHHHHHHc---CCCEEEECC
Confidence 66654 33444443 577777664
No 366
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=97.24 E-value=0.0027 Score=50.16 Aligned_cols=76 Identities=21% Similarity=0.274 Sum_probs=50.1
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcE
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~ 114 (179)
.+++++|+|+ |++|...++.+...|+ +|+++++++++.+... ++ |.+.. .|..+. ++.+..+..+.+|+
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~l----Ga~~v---i~~~~~-~~~~~~~~~g~~D~ 238 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EM----GADKL---VNPQND-DLDHYKAEKGYFDV 238 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-Hc----CCcEE---ecCCcc-cHHHHhccCCCCCE
Confidence 5889999997 8999999998889998 5888999887665332 22 33321 232221 23333333345788
Q ss_pred EEecCCC
Q 030328 115 LVVNQGV 121 (179)
Q Consensus 115 li~~ag~ 121 (179)
++.++|.
T Consensus 239 vid~~G~ 245 (343)
T PRK09880 239 SFEVSGH 245 (343)
T ss_pred EEECCCC
Confidence 8888773
No 367
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.23 E-value=0.0028 Score=51.74 Aligned_cols=45 Identities=22% Similarity=0.487 Sum_probs=38.6
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHHHHHHH
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLEEAKQS 80 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~ 80 (179)
+.+++++|.|+ |.+|..+++.|...|+ +|++++|++++.+...++
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~ 225 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE 225 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence 67899999998 9999999999999997 689999998776655544
No 368
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=97.22 E-value=0.0055 Score=45.76 Aligned_cols=81 Identities=17% Similarity=0.348 Sum_probs=51.0
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecCh-------------------hHHHHHHHHHHhh-cCceEEEE
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSG-------------------EKLEEAKQSIQLA-TGIEVATY 92 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~~-------------------~~~~~~~~~~~~~-~~~~v~~~ 92 (179)
.+.+++++|.|+ ||+|.++|+.|+..|.. +.++|.+. .+.+...+.+... +..++..+
T Consensus 18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~ 96 (228)
T cd00757 18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY 96 (228)
T ss_pred HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 578899999998 89999999999999975 77776542 1334444444432 23456666
Q ss_pred EeeCCCHHHHHHHHHhhCCCcEEEecC
Q 030328 93 SADVRDFDAVKTALDEAGPVDVLVVNQ 119 (179)
Q Consensus 93 ~~D~~~~~~v~~~~~~~~~id~li~~a 119 (179)
..+++ .++++++++ ..|++|.+.
T Consensus 97 ~~~i~-~~~~~~~~~---~~DvVi~~~ 119 (228)
T cd00757 97 NERLD-AENAEELIA---GYDLVLDCT 119 (228)
T ss_pred cceeC-HHHHHHHHh---CCCEEEEcC
Confidence 65553 333444443 345554443
No 369
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.22 E-value=0.003 Score=51.43 Aligned_cols=45 Identities=20% Similarity=0.446 Sum_probs=38.5
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChhHHHHHHHH
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGEKLEEAKQS 80 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g-~~v~~~~r~~~~~~~~~~~ 80 (179)
+.+++++|.|+ |.+|..+++.|...| .+|++++|+.++.++..++
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~ 223 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKE 223 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 67899999998 999999999999999 6799999998776555443
No 370
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.21 E-value=0.0012 Score=46.93 Aligned_cols=43 Identities=23% Similarity=0.349 Sum_probs=37.4
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHH
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLE 75 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~ 75 (179)
.++++|+++|.|++.-+|..+++.|.++|++|.++.|+.++..
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~ 82 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLK 82 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHH
Confidence 4589999999999666799999999999999999999865444
No 371
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.21 E-value=0.0028 Score=51.93 Aligned_cols=71 Identities=23% Similarity=0.401 Sum_probs=49.8
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEec
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVN 118 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~~ 118 (179)
+++|.|+ |.+|.++++.|.++|..+++++++++..++..+. ..+..+..|.++.+.+++. ...+.|.+|..
T Consensus 2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~------~~~~~~~gd~~~~~~l~~~--~~~~a~~vi~~ 72 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR------LDVRTVVGNGSSPDVLREA--GAEDADLLIAV 72 (453)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh------cCEEEEEeCCCCHHHHHHc--CCCcCCEEEEe
Confidence 6888998 9999999999999999999999998876654321 2245566777766555443 01245555544
No 372
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=97.19 E-value=0.0065 Score=50.58 Aligned_cols=42 Identities=26% Similarity=0.299 Sum_probs=37.4
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEA 77 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~ 77 (179)
..+.+++|.|+ |.+|...++.+...|++|+++|+++++.+..
T Consensus 163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~a 204 (509)
T PRK09424 163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQV 204 (509)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 45889999999 9999999999999999999999998876644
No 373
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.19 E-value=0.0069 Score=44.36 Aligned_cols=37 Identities=22% Similarity=0.353 Sum_probs=33.5
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecC
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARS 70 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~ 70 (179)
..+..++++|.|+ ||+|..+|..|+..|. +++++|.+
T Consensus 17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3578899999999 8999999999999998 59999988
No 374
>PRK04148 hypothetical protein; Provisional
Probab=97.15 E-value=0.0016 Score=44.41 Aligned_cols=56 Identities=16% Similarity=0.272 Sum_probs=43.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFD 100 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 100 (179)
+++++++.|.+ .|.++|..|.+.|++|+++|.+++..+...+. .+..+..|+.+++
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~-------~~~~v~dDlf~p~ 71 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL-------GLNAFVDDLFNPN 71 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh-------CCeEEECcCCCCC
Confidence 45789999997 77889999999999999999999866544332 2456777877644
No 375
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=97.14 E-value=0.0076 Score=46.43 Aligned_cols=79 Identities=25% Similarity=0.323 Sum_probs=57.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh--CCCc
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~--~~id 113 (179)
++++++|+||+|..|+-.-|.-.-.|++|+....+.++..-...++ |.+.. .|..++.++.+.+++. ..+|
T Consensus 153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~----G~d~a---fNYK~e~~~~~aL~r~~P~GID 225 (343)
T KOG1196|consen 153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKF----GFDDA---FNYKEESDLSAALKRCFPEGID 225 (343)
T ss_pred CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhcc----CCccc---eeccCccCHHHHHHHhCCCcce
Confidence 6799999999999999887777778999999999888766544433 33322 3444554566666654 3699
Q ss_pred EEEecCCC
Q 030328 114 VLVVNQGV 121 (179)
Q Consensus 114 ~li~~ag~ 121 (179)
+.+-|.|.
T Consensus 226 iYfeNVGG 233 (343)
T KOG1196|consen 226 IYFENVGG 233 (343)
T ss_pred EEEeccCc
Confidence 99999983
No 376
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=97.13 E-value=0.0037 Score=48.20 Aligned_cols=77 Identities=34% Similarity=0.447 Sum_probs=51.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh--CCCc
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~--~~id 113 (179)
.+++++|+|+++++|.++++.+...|++|+++.+++++.+.. .+. +.+. ..+..+.+..+++.+.. +++|
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~----g~~~---~~~~~~~~~~~~~~~~~~~~~~d 210 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL----GADI---AINYREEDFVEVVKAETGGKGVD 210 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc----CCcE---EEecCchhHHHHHHHHcCCCCeE
Confidence 578999999999999999999999999999999887665432 222 2221 12222233223333221 3588
Q ss_pred EEEecCC
Q 030328 114 VLVVNQG 120 (179)
Q Consensus 114 ~li~~ag 120 (179)
.+++++|
T Consensus 211 ~~i~~~~ 217 (325)
T TIGR02824 211 VILDIVG 217 (325)
T ss_pred EEEECCc
Confidence 8888765
No 377
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=97.10 E-value=0.0046 Score=49.94 Aligned_cols=47 Identities=28% Similarity=0.534 Sum_probs=41.3
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHH
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGEKLEEAKQSIQ 82 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g-~~v~~~~r~~~~~~~~~~~~~ 82 (179)
+++++++|.|| |-+|.-.|++|.++| .+|+++-|+.++.++..+++.
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~ 223 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG 223 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence 78999999999 889999999999999 558889999988887777653
No 378
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.10 E-value=0.0089 Score=42.78 Aligned_cols=76 Identities=17% Similarity=0.311 Sum_probs=50.0
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCe-EEEEecCh------------------hHHHHHHHHHHh-hcCceEEEEEeeCCC
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGAR-VSILARSG------------------EKLEEAKQSIQL-ATGIEVATYSADVRD 98 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~~------------------~~~~~~~~~~~~-~~~~~v~~~~~D~~~ 98 (179)
+++|.|+ ||+|..+++.|+..|.. +.++|.+. .+.+...+.+.. .+..++..+...++.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~ 79 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE 79 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence 3788887 89999999999999985 89998875 122333333332 234556666555544
Q ss_pred HHHHHHHHHhhCCCcEEEecC
Q 030328 99 FDAVKTALDEAGPVDVLVVNQ 119 (179)
Q Consensus 99 ~~~v~~~~~~~~~id~li~~a 119 (179)
+.++++++ ..|++|.+.
T Consensus 80 -~~~~~~l~---~~DlVi~~~ 96 (174)
T cd01487 80 -NNLEGLFG---DCDIVVEAF 96 (174)
T ss_pred -hhHHHHhc---CCCEEEECC
Confidence 34445554 578887774
No 379
>PLN00203 glutamyl-tRNA reductase
Probab=97.07 E-value=0.0054 Score=51.25 Aligned_cols=46 Identities=17% Similarity=0.419 Sum_probs=40.0
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHH
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLEEAKQSI 81 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~ 81 (179)
+.+++++|.|+ |.+|..+++.|...|+ +|+++.|+.++.+...+++
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~ 310 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF 310 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence 67899999999 9999999999999997 5999999988877665544
No 380
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.06 E-value=0.01 Score=47.31 Aligned_cols=81 Identities=19% Similarity=0.270 Sum_probs=52.2
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecCh-------------------hHHHHHHHHHHh-hcCceEEEE
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSG-------------------EKLEEAKQSIQL-ATGIEVATY 92 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~~-------------------~~~~~~~~~~~~-~~~~~v~~~ 92 (179)
.+++++++|.|+ ||+|..+++.|+..|.. +.++|.+. .+.+...+.+.. .+..++..+
T Consensus 25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~ 103 (355)
T PRK05597 25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS 103 (355)
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence 478899999999 89999999999999965 78888764 234444444443 235556666
Q ss_pred EeeCCCHHHHHHHHHhhCCCcEEEecC
Q 030328 93 SADVRDFDAVKTALDEAGPVDVLVVNQ 119 (179)
Q Consensus 93 ~~D~~~~~~v~~~~~~~~~id~li~~a 119 (179)
...++. ++..++++ ..|++|.+.
T Consensus 104 ~~~i~~-~~~~~~~~---~~DvVvd~~ 126 (355)
T PRK05597 104 VRRLTW-SNALDELR---DADVILDGS 126 (355)
T ss_pred EeecCH-HHHHHHHh---CCCEEEECC
Confidence 656653 23333333 345554443
No 381
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=97.05 E-value=0.0046 Score=40.83 Aligned_cols=71 Identities=28% Similarity=0.419 Sum_probs=51.4
Q ss_pred EEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEecC
Q 030328 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVVNQ 119 (179)
Q Consensus 40 vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~~a 119 (179)
++|.|. |.+|..+++.|.+.+.+|++++++++..++..++ + +..+.+|.++++.+++. ...+.+.++-..
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~-----~--~~~i~gd~~~~~~l~~a--~i~~a~~vv~~~ 70 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE-----G--VEVIYGDATDPEVLERA--GIEKADAVVILT 70 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT-----T--SEEEES-TTSHHHHHHT--TGGCESEEEEES
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc-----c--cccccccchhhhHHhhc--CccccCEEEEcc
Confidence 567788 6899999999999877999999998875544321 2 56788999998877665 223567666655
Q ss_pred C
Q 030328 120 G 120 (179)
Q Consensus 120 g 120 (179)
.
T Consensus 71 ~ 71 (116)
T PF02254_consen 71 D 71 (116)
T ss_dssp S
T ss_pred C
Confidence 4
No 382
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=97.05 E-value=0.002 Score=53.37 Aligned_cols=72 Identities=24% Similarity=0.373 Sum_probs=51.5
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
.+++++++|+|+ ||+|++++..|.+.|+++.+++|+.++.++..++.. ... .+. +++. .....|
T Consensus 329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~----~~~----~~~---~~~~----~l~~~D 392 (477)
T PRK09310 329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQ----GKA----FPL---ESLP----ELHRID 392 (477)
T ss_pred CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----cce----ech---hHhc----ccCCCC
Confidence 467899999997 799999999999999999999999877665544321 111 111 1111 134689
Q ss_pred EEEecCCC
Q 030328 114 VLVVNQGV 121 (179)
Q Consensus 114 ~li~~ag~ 121 (179)
++||+...
T Consensus 393 iVInatP~ 400 (477)
T PRK09310 393 IIINCLPP 400 (477)
T ss_pred EEEEcCCC
Confidence 99999754
No 383
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=97.05 E-value=0.0056 Score=47.61 Aligned_cols=42 Identities=21% Similarity=0.286 Sum_probs=36.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEA 77 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~ 77 (179)
.+++++|.|+++++|.++++.....|++|+++++++++.+..
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~ 187 (326)
T cd08289 146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL 187 (326)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence 467999999999999999999999999999999988765544
No 384
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=97.04 E-value=0.013 Score=44.34 Aligned_cols=37 Identities=22% Similarity=0.380 Sum_probs=32.0
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecC
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARS 70 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~ 70 (179)
..+++++++|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 3578899999999 9999999999999996 47777765
No 385
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.04 E-value=0.0092 Score=43.87 Aligned_cols=40 Identities=28% Similarity=0.439 Sum_probs=35.3
Q ss_pred CcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChh
Q 030328 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGE 72 (179)
Q Consensus 32 ~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~ 72 (179)
..++.||+++|.|+ |.+|..-++.|.+.|++|++++.+..
T Consensus 4 ~l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~ 43 (205)
T TIGR01470 4 FANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE 43 (205)
T ss_pred EEEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence 34678999999998 89999999999999999999987654
No 386
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.04 E-value=0.0055 Score=47.95 Aligned_cols=72 Identities=26% Similarity=0.456 Sum_probs=50.9
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
+.+++++|.|+ |.+|..+++.|...| .+|++++|++++.++..+++ +.. . .+.+++.+.+. ..|
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~----g~~--~-----~~~~~~~~~l~---~aD 240 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL----GGN--A-----VPLDELLELLN---EAD 240 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc----CCe--E-----EeHHHHHHHHh---cCC
Confidence 57899999998 999999999999877 56889999988776655543 221 1 11233333333 568
Q ss_pred EEEecCCC
Q 030328 114 VLVVNQGV 121 (179)
Q Consensus 114 ~li~~ag~ 121 (179)
++|.+.+.
T Consensus 241 vVi~at~~ 248 (311)
T cd05213 241 VVISATGA 248 (311)
T ss_pred EEEECCCC
Confidence 88888774
No 387
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=97.04 E-value=0.0059 Score=47.12 Aligned_cols=42 Identities=36% Similarity=0.425 Sum_probs=37.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEA 77 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~ 77 (179)
.+++++|+|+++++|.++++.+...|++++++++++++.+..
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~ 185 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL 185 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 578999999999999999999999999999999887665543
No 388
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=97.00 E-value=0.013 Score=47.06 Aligned_cols=36 Identities=17% Similarity=0.485 Sum_probs=32.2
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARS 70 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~ 70 (179)
.+++++++|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 467889999999 8999999999999996 68888876
No 389
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=96.99 E-value=0.0059 Score=50.30 Aligned_cols=78 Identities=28% Similarity=0.414 Sum_probs=54.9
Q ss_pred CcCCcEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCC
Q 030328 34 PIKDRHVFITGG----------------SSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVR 97 (179)
Q Consensus 34 ~~~~k~vlItGa----------------~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~ 97 (179)
+++||++|||+| ||.+|.++|+.+..+|++|+++..... +. ....+..+ ++.
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~--------~~--~p~~v~~i--~V~ 320 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD--------LA--DPQGVKVI--HVE 320 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC--------CC--CCCCceEE--Eec
Confidence 479999999975 578999999999999999999886432 11 11224443 344
Q ss_pred CHHHHHHHHHhhCCCcEEEecCCCCC
Q 030328 98 DFDAVKTALDEAGPVDVLVVNQGVFV 123 (179)
Q Consensus 98 ~~~~v~~~~~~~~~id~li~~ag~~~ 123 (179)
+.++..+.+++.-+.|++|.+|.+..
T Consensus 321 ta~eM~~av~~~~~~Di~I~aAAVaD 346 (475)
T PRK13982 321 SARQMLAAVEAALPADIAIFAAAVAD 346 (475)
T ss_pred CHHHHHHHHHhhCCCCEEEEeccccc
Confidence 55555555544335799999998754
No 390
>PRK08223 hypothetical protein; Validated
Probab=96.99 E-value=0.008 Score=46.36 Aligned_cols=36 Identities=22% Similarity=0.269 Sum_probs=31.8
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARS 70 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~ 70 (179)
.+++.+++|.|+ ||+|..++..|+..|.. +.++|.+
T Consensus 24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 478999999999 89999999999999965 7788776
No 391
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=96.99 E-value=0.0065 Score=46.33 Aligned_cols=79 Identities=23% Similarity=0.226 Sum_probs=51.9
Q ss_pred EEEEcCCCchHHHHHHHHHHcC----CeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEE
Q 030328 40 VFITGGSSGIGLALAHQAAKEG----ARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (179)
Q Consensus 40 vlItGa~~~iG~~la~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~l 115 (179)
+.|.||+|.+|..++..++..| .+++++|.+++.++....++....... ....++..++..+.+ ...|++
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~---~~~~i~~~~d~~~~~---~~aDiV 74 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL---ADIKVSITDDPYEAF---KDADVV 74 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc---cCcEEEECCchHHHh---CCCCEE
Confidence 4689998899999999999988 689999999887776666654221111 011111111222333 368999
Q ss_pred EecCCCCCC
Q 030328 116 VVNQGVFVP 124 (179)
Q Consensus 116 i~~ag~~~~ 124 (179)
|..+|....
T Consensus 75 v~t~~~~~~ 83 (263)
T cd00650 75 IITAGVGRK 83 (263)
T ss_pred EECCCCCCC
Confidence 999986543
No 392
>PTZ00117 malate dehydrogenase; Provisional
Probab=96.97 E-value=0.0086 Score=47.04 Aligned_cols=78 Identities=15% Similarity=0.219 Sum_probs=49.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHhh---cCceEEEEEeeCCCHHHHHHHHHhhCC
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGEKLEEAKQSIQLA---TGIEVATYSADVRDFDAVKTALDEAGP 111 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~~v~~~~~~~~~ 111 (179)
+.+++.|+|| |.+|..++..++..| .+++++|.+++.++....++... .+.... +.. .++ .+ .+ ..
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~-i~~-~~d---~~-~l---~~ 73 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNIN-ILG-TNN---YE-DI---KD 73 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeE-EEe-CCC---HH-Hh---CC
Confidence 5678999997 889999999999988 78999999887544322222110 011111 111 122 22 22 36
Q ss_pred CcEEEecCCCCC
Q 030328 112 VDVLVVNQGVFV 123 (179)
Q Consensus 112 id~li~~ag~~~ 123 (179)
.|++|.++|...
T Consensus 74 ADiVVitag~~~ 85 (319)
T PTZ00117 74 SDVVVITAGVQR 85 (319)
T ss_pred CCEEEECCCCCC
Confidence 799999998654
No 393
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=96.94 E-value=0.014 Score=43.94 Aligned_cols=37 Identities=27% Similarity=0.426 Sum_probs=31.7
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecCh
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSG 71 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~~ 71 (179)
.+++++++|.|+ ||+|..+++.|+..|.. ++++|.+.
T Consensus 21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 467889999999 89999999999999965 77777753
No 394
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=96.94 E-value=0.0084 Score=46.47 Aligned_cols=77 Identities=25% Similarity=0.299 Sum_probs=51.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh--CCCc
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVD 113 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~--~~id 113 (179)
.+.+++|+|+++++|.++++.+...|++|+.+++++++.+.. +++ +.+. ..|..+.+..+++.+.. .++|
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~----g~~~---~~~~~~~~~~~~~~~~~~~~~~d 213 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL----GADV---AVDYTRPDWPDQVREALGGGGVT 213 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc----CCCE---EEecCCccHHHHHHHHcCCCCce
Confidence 478999999999999999999999999999999887765443 222 3221 12333333333333222 2588
Q ss_pred EEEecCC
Q 030328 114 VLVVNQG 120 (179)
Q Consensus 114 ~li~~ag 120 (179)
.++++.|
T Consensus 214 ~vl~~~g 220 (324)
T cd08244 214 VVLDGVG 220 (324)
T ss_pred EEEECCC
Confidence 8888765
No 395
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=96.94 E-value=0.0078 Score=47.24 Aligned_cols=40 Identities=30% Similarity=0.324 Sum_probs=34.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChhHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGEKLEE 76 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~~~~~~~ 76 (179)
.+.+++|+|+ |++|...++.+...|++ |+++++++++.+.
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~ 203 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLEL 203 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 4889999986 89999999999999999 9999988776543
No 396
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=96.91 E-value=0.01 Score=46.38 Aligned_cols=115 Identities=23% Similarity=0.234 Sum_probs=63.9
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCe--EEEEecCh--hHHHHHHHHHHhh---cCceEEEEEeeCCCHHHHHHHHHhhC
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGAR--VSILARSG--EKLEEAKQSIQLA---TGIEVATYSADVRDFDAVKTALDEAG 110 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~--v~~~~r~~--~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~~v~~~~~~~~ 110 (179)
+++.|+|++|.+|..++..++..|.. |+++|+++ +.++....++... .+.... ...++ +.+ ...
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~---i~~~~--d~~----~l~ 71 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAE---IKISS--DLS----DVA 71 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcE---EEECC--CHH----HhC
Confidence 46899999999999999999999864 99999954 3333333222210 111111 11111 112 234
Q ss_pred CCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEecc
Q 030328 111 PVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMSS 173 (179)
Q Consensus 111 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~iss 173 (179)
..|++|.++|....+ ..+.. +.++.|+.-. +.+.+.+.+.. ..+.++++++
T Consensus 72 ~aDiViitag~p~~~---~~~r~---dl~~~n~~i~----~~~~~~i~~~~--~~~~viv~~n 122 (309)
T cd05294 72 GSDIVIITAGVPRKE---GMSRL---DLAKKNAKIV----KKYAKQIAEFA--PDTKILVVTN 122 (309)
T ss_pred CCCEEEEecCCCCCC---CCCHH---HHHHHHHHHH----HHHHHHHHHHC--CCeEEEEeCC
Confidence 789999999964321 22322 2345454433 44444444432 2346666665
No 397
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=96.90 E-value=0.0079 Score=46.67 Aligned_cols=42 Identities=21% Similarity=0.264 Sum_probs=36.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEA 77 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~ 77 (179)
.+.+++|.|+++.+|.++++.....|++++++.++.+..+..
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~ 180 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL 180 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence 578999999999999999999999999999998887654443
No 398
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=96.89 E-value=0.0013 Score=40.01 Aligned_cols=34 Identities=29% Similarity=0.441 Sum_probs=23.4
Q ss_pred CC-cEEEEEcCCCchHHH--HHHHHHHcCCeEEEEecC
Q 030328 36 KD-RHVFITGGSSGIGLA--LAHQAAKEGARVSILARS 70 (179)
Q Consensus 36 ~~-k~vlItGa~~~iG~~--la~~l~~~g~~v~~~~r~ 70 (179)
.+ |++||+|+|+|.|++ ++..+ ..|++.+.++..
T Consensus 37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE 73 (78)
T PF12242_consen 37 NGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE 73 (78)
T ss_dssp TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred CCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence 44 899999999999999 55555 677887777654
No 399
>PRK08328 hypothetical protein; Provisional
Probab=96.86 E-value=0.022 Score=42.69 Aligned_cols=37 Identities=22% Similarity=0.353 Sum_probs=31.9
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecC
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARS 70 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~ 70 (179)
..+++++++|.|+ ||+|.++++.|+..|.. +.++|.+
T Consensus 23 ~~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 23 EKLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred HHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 3478899999999 89999999999999965 7788765
No 400
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=96.86 E-value=0.01 Score=46.20 Aligned_cols=42 Identities=26% Similarity=0.249 Sum_probs=36.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEA 77 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~ 77 (179)
.+.+++|.|+++.+|.++++.....|++|+++++++++.+..
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~ 180 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL 180 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH
Confidence 578999999999999999999999999999999887655433
No 401
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=96.86 E-value=0.0045 Score=44.52 Aligned_cols=43 Identities=33% Similarity=0.500 Sum_probs=35.0
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHH
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQ 82 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 82 (179)
++.|.|| |.+|..+|..++..|++|.+.|++++.+++..+.+.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~ 43 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE 43 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence 4778898 999999999999999999999999987766555543
No 402
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=96.83 E-value=0.014 Score=44.92 Aligned_cols=40 Identities=35% Similarity=0.483 Sum_probs=35.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLE 75 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~ 75 (179)
.+.+++|.|+++++|.++++.....|++|+.+.+++++.+
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 181 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAA 181 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 5789999999999999999999999999999988876544
No 403
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.82 E-value=0.028 Score=38.61 Aligned_cols=77 Identities=18% Similarity=0.335 Sum_probs=49.9
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCC-eEEEEecCh-------------------hHHHHHHHHHHhh-cCceEEEEEeeCC
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGA-RVSILARSG-------------------EKLEEAKQSIQLA-TGIEVATYSADVR 97 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~-~~~~v~~~~~D~~ 97 (179)
+++|.|+ ||+|..+++.|+..|. ++.++|.+. .+.+...+.+... +..++..+..++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 4788998 8999999999999998 588887652 1233333344332 2456666666655
Q ss_pred CHHHHHHHHHhhCCCcEEEecCC
Q 030328 98 DFDAVKTALDEAGPVDVLVVNQG 120 (179)
Q Consensus 98 ~~~~v~~~~~~~~~id~li~~ag 120 (179)
+... .+. ..+.|++|.+..
T Consensus 80 ~~~~-~~~---~~~~diVi~~~d 98 (143)
T cd01483 80 EDNL-DDF---LDGVDLVIDAID 98 (143)
T ss_pred hhhH-HHH---hcCCCEEEECCC
Confidence 4322 222 346888888775
No 404
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.82 E-value=0.012 Score=45.88 Aligned_cols=74 Identities=30% Similarity=0.408 Sum_probs=51.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCC-CHHHHHHHHHhh-CCCc
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVR-DFDAVKTALDEA-GPVD 113 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~v~~~~~~~-~~id 113 (179)
.|+++-|+|++| +|.--.+.-...|++|+++++...+-++..+.+ |.+.. .|.+ |++.++++.+.. +.+|
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L----GAd~f---v~~~~d~d~~~~~~~~~dg~~~ 252 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL----GADVF---VDSTEDPDIMKAIMKTTDGGID 252 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc----Cccee---EEecCCHHHHHHHHHhhcCcce
Confidence 799999999977 987766666678999999999986655554443 55543 3555 677777777653 3344
Q ss_pred EEEe
Q 030328 114 VLVV 117 (179)
Q Consensus 114 ~li~ 117 (179)
.+.|
T Consensus 253 ~v~~ 256 (360)
T KOG0023|consen 253 TVSN 256 (360)
T ss_pred eeee
Confidence 4443
No 405
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=96.82 E-value=0.0059 Score=43.62 Aligned_cols=80 Identities=18% Similarity=0.169 Sum_probs=56.3
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhC
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEG--ARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAG 110 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~ 110 (179)
+.+.++.++|.||+|-.|..+.+++.+++ .+|+++.|++...+++ ...+.-...|+++. ++..+...
T Consensus 14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at--------~k~v~q~~vDf~Kl---~~~a~~~q 82 (238)
T KOG4039|consen 14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT--------DKVVAQVEVDFSKL---SQLATNEQ 82 (238)
T ss_pred HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc--------cceeeeEEechHHH---HHHHhhhc
Confidence 34678999999999999999999999987 4599999985322211 22233345565544 45555555
Q ss_pred CCcEEEecCCCCC
Q 030328 111 PVDVLVVNQGVFV 123 (179)
Q Consensus 111 ~id~li~~ag~~~ 123 (179)
.+|+++.+-|...
T Consensus 83 g~dV~FcaLgTTR 95 (238)
T KOG4039|consen 83 GPDVLFCALGTTR 95 (238)
T ss_pred CCceEEEeecccc
Confidence 7899999877654
No 406
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=96.79 E-value=0.022 Score=48.84 Aligned_cols=60 Identities=17% Similarity=0.387 Sum_probs=46.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHH
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKT 104 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~ 104 (179)
.++++|.|. |.+|+.+++.|.++|.+++++|+++++.++..+ .+ ...+..|.++++-+++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-----~g--~~v~~GDat~~~~L~~ 459 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK-----FG--MKVFYGDATRMDLLES 459 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-----cC--CeEEEEeCCCHHHHHh
Confidence 467888888 899999999999999999999999987765533 12 3457788887765543
No 407
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.78 E-value=0.027 Score=43.16 Aligned_cols=37 Identities=22% Similarity=0.410 Sum_probs=32.4
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecC
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARS 70 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g-~~v~~~~r~ 70 (179)
..+++++++|.|+ ||+|..+|..|+..| -++.++|.+
T Consensus 26 ~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 26 QLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred HHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3478899999999 899999999999999 568888876
No 408
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=96.77 E-value=0.055 Score=42.60 Aligned_cols=80 Identities=18% Similarity=0.260 Sum_probs=50.3
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChhHHHHHHHHHHh---hcCceEEEEEeeCCCHHHHHHHHHhhC
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEG-ARVSILARSGEKLEEAKQSIQL---ATGIEVATYSADVRDFDAVKTALDEAG 110 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~---~~~~~v~~~~~D~~~~~~v~~~~~~~~ 110 (179)
++.+++.|.|| |.+|..+|..++.+| .+++++|.+++..+....++.. ..+....... .+|. + ...
T Consensus 4 ~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~---~----~l~ 73 (321)
T PTZ00082 4 IKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNY---E----DIA 73 (321)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCH---H----HhC
Confidence 34578999996 889999999999999 4899999988754322111111 0111111111 1222 1 234
Q ss_pred CCcEEEecCCCCCC
Q 030328 111 PVDVLVVNQGVFVP 124 (179)
Q Consensus 111 ~id~li~~ag~~~~ 124 (179)
..|++|+.+|....
T Consensus 74 ~aDiVI~tag~~~~ 87 (321)
T PTZ00082 74 GSDVVIVTAGLTKR 87 (321)
T ss_pred CCCEEEECCCCCCC
Confidence 68999999997553
No 409
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.77 E-value=0.0048 Score=42.54 Aligned_cols=45 Identities=20% Similarity=0.317 Sum_probs=38.9
Q ss_pred CcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHH
Q 030328 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEE 76 (179)
Q Consensus 32 ~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~ 76 (179)
..+++||+++|.|.+.-.|+.++..|.++|++|..++++...+++
T Consensus 23 ~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~ 67 (140)
T cd05212 23 GVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS 67 (140)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence 446899999999999999999999999999999999876544443
No 410
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.76 E-value=0.0064 Score=51.37 Aligned_cols=71 Identities=13% Similarity=0.258 Sum_probs=52.5
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEEEe
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVLVV 117 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~li~ 117 (179)
.+++|.|+ |.+|++++++|.++|.+++++|+++++.++..+ .....+.+|.+|++.+++. ...+.|.++-
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~-------~g~~~i~GD~~~~~~L~~a--~i~~a~~viv 487 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE-------RGIRAVLGNAANEEIMQLA--HLDCARWLLL 487 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-------CCCeEEEcCCCCHHHHHhc--CccccCEEEE
Confidence 46788888 899999999999999999999999887665432 1355678899987766543 1235665554
Q ss_pred c
Q 030328 118 N 118 (179)
Q Consensus 118 ~ 118 (179)
.
T Consensus 488 ~ 488 (558)
T PRK10669 488 T 488 (558)
T ss_pred E
Confidence 3
No 411
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.75 E-value=0.0053 Score=47.34 Aligned_cols=43 Identities=19% Similarity=0.365 Sum_probs=37.6
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHH
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLE 75 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~ 75 (179)
.+++||+++|+|+|.-+|+.++..|.++|++|+++.++...++
T Consensus 154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~ 196 (286)
T PRK14175 154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMA 196 (286)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH
Confidence 3689999999999998999999999999999998888654443
No 412
>PLN02740 Alcohol dehydrogenase-like
Probab=96.74 E-value=0.014 Score=46.74 Aligned_cols=41 Identities=32% Similarity=0.390 Sum_probs=35.1
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLEEA 77 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~ 77 (179)
.+++++|.|+ |++|...++.+...|+ +|+++++++++.+..
T Consensus 198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a 239 (381)
T PLN02740 198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG 239 (381)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH
Confidence 5889999996 9999999999999999 599999988765543
No 413
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=96.74 E-value=0.014 Score=46.03 Aligned_cols=83 Identities=17% Similarity=0.168 Sum_probs=56.1
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChhHHHH--------HHHHHHhhcCceEEEEEeeCCCHHH--H
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR-SGEKLEE--------AKQSIQLATGIEVATYSADVRDFDA--V 102 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r-~~~~~~~--------~~~~~~~~~~~~v~~~~~D~~~~~~--v 102 (179)
.+.||++.|.|. |.||+++|+++...|++|++.|+ ..+..+. ..+++. ...++....+.+++... +
T Consensus 139 el~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL--~~sDiv~lh~PlT~eT~g~i 215 (324)
T COG0111 139 ELAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELL--AEADILTLHLPLTPETRGLI 215 (324)
T ss_pred cccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHH--hhCCEEEEcCCCCcchhccc
Confidence 578999999999 89999999999999999999999 3332111 112221 24667777788876543 1
Q ss_pred -HHHHHhhCCCcEEEecC
Q 030328 103 -KTALDEAGPVDVLVVNQ 119 (179)
Q Consensus 103 -~~~~~~~~~id~li~~a 119 (179)
.+.+++.++-.++||++
T Consensus 216 ~~~~~a~MK~gailIN~a 233 (324)
T COG0111 216 NAEELAKMKPGAILINAA 233 (324)
T ss_pred CHHHHhhCCCCeEEEECC
Confidence 23344444334677765
No 414
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.74 E-value=0.0057 Score=45.34 Aligned_cols=41 Identities=37% Similarity=0.475 Sum_probs=35.9
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHH
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQ 79 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~ 79 (179)
++.|.|++|.+|.+++..|++.|++|.+.+|++++.+...+
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~ 42 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAA 42 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHH
Confidence 58899988999999999999999999999999887665544
No 415
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=96.73 E-value=0.012 Score=46.90 Aligned_cols=76 Identities=26% Similarity=0.360 Sum_probs=48.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh-CCCc
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA-GPVD 113 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~-~~id 113 (179)
.+++++|.|+ |++|...++.+...|+ +|+++++++++.+.. +++ +.+. ..|..+.+..+++.+.. +++|
T Consensus 191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~----Ga~~---~i~~~~~~~~~~i~~~~~~g~d 261 (371)
T cd08281 191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL----GATA---TVNAGDPNAVEQVRELTGGGVD 261 (371)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc----CCce---EeCCCchhHHHHHHHHhCCCCC
Confidence 5789999986 8999999998889999 599999888765533 222 3321 12333332223332221 2578
Q ss_pred EEEecCC
Q 030328 114 VLVVNQG 120 (179)
Q Consensus 114 ~li~~ag 120 (179)
++|.+.|
T Consensus 262 ~vid~~G 268 (371)
T cd08281 262 YAFEMAG 268 (371)
T ss_pred EEEECCC
Confidence 8888776
No 416
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=96.71 E-value=0.016 Score=44.53 Aligned_cols=41 Identities=39% Similarity=0.491 Sum_probs=36.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEE 76 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~ 76 (179)
.+++++|+|+++++|.++++.+...|++|+.++++.++.+.
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 179 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLAL 179 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHH
Confidence 57899999999999999999999999999999988765443
No 417
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.70 E-value=0.017 Score=38.85 Aligned_cols=74 Identities=27% Similarity=0.334 Sum_probs=48.3
Q ss_pred EEEEEcCCCchHHHHHHHHHH-cCCeEE-EEecCh----------------------hHHHHHHHHHHhhcCceEEEEEe
Q 030328 39 HVFITGGSSGIGLALAHQAAK-EGARVS-ILARSG----------------------EKLEEAKQSIQLATGIEVATYSA 94 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~-~g~~v~-~~~r~~----------------------~~~~~~~~~~~~~~~~~v~~~~~ 94 (179)
++.|.|++|.+|+.+++.+.+ .+.++. .+++++ +..++..+ . .+ +..
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~----~--~D---VvI 72 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLE----E--AD---VVI 72 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTT----H---S---EEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcc----c--CC---EEE
Confidence 689999999999999999998 778854 566766 11222211 1 23 456
Q ss_pred eCCCHHHHHHHHHhh--CCCcEEEecCCC
Q 030328 95 DVRDFDAVKTALDEA--GPVDVLVVNQGV 121 (179)
Q Consensus 95 D~~~~~~v~~~~~~~--~~id~li~~ag~ 121 (179)
|+|.++.+.+.++.. .+..+++-+.|.
T Consensus 73 DfT~p~~~~~~~~~~~~~g~~~ViGTTG~ 101 (124)
T PF01113_consen 73 DFTNPDAVYDNLEYALKHGVPLVIGTTGF 101 (124)
T ss_dssp EES-HHHHHHHHHHHHHHT-EEEEE-SSS
T ss_pred EcCChHHhHHHHHHHHhCCCCEEEECCCC
Confidence 999988877665542 257778777773
No 418
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=96.70 E-value=0.023 Score=44.78 Aligned_cols=84 Identities=18% Similarity=0.241 Sum_probs=56.4
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChh-HHHHH-------HHHHHhhcCceEEEEEeeCCCHHH--H
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGE-KLEEA-------KQSIQLATGIEVATYSADVRDFDA--V 102 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~-~~~~~-------~~~~~~~~~~~v~~~~~D~~~~~~--v 102 (179)
..++||++.|.|- |.||+++|+++..-|++|+..+|++. ..++. .+++ ....++..+.+.++.... +
T Consensus 142 ~~l~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~l~el--l~~sDii~l~~Plt~~T~hLi 218 (324)
T COG1052 142 FDLRGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVDLDEL--LAESDIISLHCPLTPETRHLI 218 (324)
T ss_pred cCCCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCChHHHhhcCceeccHHHH--HHhCCEEEEeCCCChHHhhhc
Confidence 4689999999998 99999999999999999999998863 11111 1122 124677778888876443 1
Q ss_pred -HHHHHhhCCCcEEEecC
Q 030328 103 -KTALDEAGPVDVLVVNQ 119 (179)
Q Consensus 103 -~~~~~~~~~id~li~~a 119 (179)
.+.+++.++=-++||.+
T Consensus 219 n~~~l~~mk~ga~lVNta 236 (324)
T COG1052 219 NAEELAKMKPGAILVNTA 236 (324)
T ss_pred CHHHHHhCCCCeEEEECC
Confidence 23445554434555554
No 419
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=96.69 E-value=0.026 Score=45.01 Aligned_cols=39 Identities=21% Similarity=0.387 Sum_probs=32.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLE 75 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~ 75 (179)
.+++++|.|+ |++|...++.+...|++|++++.+.++..
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~ 221 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKED 221 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhh
Confidence 5889999776 89999999999999999988887765443
No 420
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=96.66 E-value=0.014 Score=52.41 Aligned_cols=77 Identities=19% Similarity=0.208 Sum_probs=59.1
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcC-Ce-------------EEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEG-AR-------------VSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDA 101 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g-~~-------------v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 101 (179)
+.|+++|.|| |.+|+..++.|++.. +. |.++|++.+.+++..+... .+..+..|++|.++
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~-----~~~~v~lDv~D~e~ 641 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE-----NAEAVQLDVSDSES 641 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC-----CCceEEeecCCHHH
Confidence 4779999998 999999999998753 33 7888998877766554331 34567889999988
Q ss_pred HHHHHHhhCCCcEEEecCCC
Q 030328 102 VKTALDEAGPVDVLVVNQGV 121 (179)
Q Consensus 102 v~~~~~~~~~id~li~~ag~ 121 (179)
+.++++ ++|+||++...
T Consensus 642 L~~~v~---~~DaVIsalP~ 658 (1042)
T PLN02819 642 LLKYVS---QVDVVISLLPA 658 (1042)
T ss_pred HHHhhc---CCCEEEECCCc
Confidence 777766 58999998754
No 421
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=96.66 E-value=0.014 Score=45.23 Aligned_cols=41 Identities=24% Similarity=0.292 Sum_probs=36.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEE 76 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~ 76 (179)
.+.+++|.|+++++|.++++.+...|++++++.+++++.+.
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~ 178 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEE 178 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHH
Confidence 57899999999999999999999999999999888765443
No 422
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=96.65 E-value=0.021 Score=38.25 Aligned_cols=65 Identities=37% Similarity=0.395 Sum_probs=43.7
Q ss_pred chHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh--CCCcEEEecCC
Q 030328 48 GIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVDVLVVNQG 120 (179)
Q Consensus 48 ~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~--~~id~li~~ag 120 (179)
|+|...++.+...|++|+++++++++.+... +.|.+. ..|.++.+-.+++.+.. .++|++|.++|
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-----~~Ga~~---~~~~~~~~~~~~i~~~~~~~~~d~vid~~g 67 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-----ELGADH---VIDYSDDDFVEQIRELTGGRGVDVVIDCVG 67 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-----HTTESE---EEETTTSSHHHHHHHHTTTSSEEEEEESSS
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-----hhcccc---cccccccccccccccccccccceEEEEecC
Confidence 5899999999999999999999987655432 234332 23444433333333332 36999999998
No 423
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=96.65 E-value=0.041 Score=40.20 Aligned_cols=36 Identities=19% Similarity=0.461 Sum_probs=30.9
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARS 70 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~ 70 (179)
.+++.+++|.|+ ||+|.++++.|+..|.. +.++|.+
T Consensus 16 ~L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 16 KLRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred HHhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence 467889999999 56999999999999977 7788765
No 424
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=96.64 E-value=0.016 Score=44.48 Aligned_cols=41 Identities=32% Similarity=0.350 Sum_probs=36.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEE 76 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~ 76 (179)
.+++++|.|+++++|.++++.....|++|+++++++++.+.
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 176 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAEL 176 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 57899999999999999999999999999999888766543
No 425
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.64 E-value=0.005 Score=47.78 Aligned_cols=44 Identities=14% Similarity=0.224 Sum_probs=38.3
Q ss_pred CcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHH
Q 030328 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLE 75 (179)
Q Consensus 32 ~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~ 75 (179)
..+++||++.+.|.++-+|+.+|..|.++|++|.++.++....+
T Consensus 154 ~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~ 197 (301)
T PRK14194 154 CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAK 197 (301)
T ss_pred CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHH
Confidence 34689999999999999999999999999999999977655433
No 426
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=96.64 E-value=0.099 Score=39.70 Aligned_cols=76 Identities=26% Similarity=0.285 Sum_probs=51.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHh--hCCCc
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDE--AGPVD 113 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~--~~~id 113 (179)
.|-++|+--|+||+|..+||++...|++++.+..+.++.+...+ .|.+ +..|.+..|-++++.+- ...+|
T Consensus 146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ake-----nG~~---h~I~y~~eD~v~~V~kiTngKGVd 217 (336)
T KOG1197|consen 146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKE-----NGAE---HPIDYSTEDYVDEVKKITNGKGVD 217 (336)
T ss_pred CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHh-----cCCc---ceeeccchhHHHHHHhccCCCCce
Confidence 57899999999999999999999999999999888766543322 3433 23455555555554331 12445
Q ss_pred EEEecC
Q 030328 114 VLVVNQ 119 (179)
Q Consensus 114 ~li~~a 119 (179)
++.-..
T Consensus 218 ~vyDsv 223 (336)
T KOG1197|consen 218 AVYDSV 223 (336)
T ss_pred eeeccc
Confidence 544433
No 427
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.63 E-value=0.012 Score=48.19 Aligned_cols=64 Identities=28% Similarity=0.405 Sum_probs=49.1
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHH
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKT 104 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~ 104 (179)
...++++|.|+ |.+|+.+++.|.++|.+|++++++++..++..++. ..+..+..|.++.+.+++
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~-----~~~~~i~gd~~~~~~L~~ 292 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL-----PNTLVLHGDGTDQELLEE 292 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC-----CCCeEEECCCCCHHHHHh
Confidence 45789999999 99999999999999999999999988666544321 234556777777665543
No 428
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.62 E-value=0.00084 Score=43.76 Aligned_cols=38 Identities=21% Similarity=0.442 Sum_probs=32.8
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~ 71 (179)
.++++++++|.|+ |.+|..-++.|.+.|++|++++.+.
T Consensus 3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence 3578999999999 9999999999999999999999985
No 429
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=96.62 E-value=0.052 Score=41.60 Aligned_cols=39 Identities=36% Similarity=0.469 Sum_probs=33.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChhHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGEKLE 75 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~~~~~~ 75 (179)
.+++++|.|+ |++|...++.+...|++ |+++++++++.+
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~ 159 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRE 159 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 6889999987 89999999999899997 888888776554
No 430
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=96.61 E-value=0.052 Score=45.27 Aligned_cols=42 Identities=26% Similarity=0.286 Sum_probs=36.4
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEA 77 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~ 77 (179)
..+.+++|.|+ |.+|...++.+...|++|+++++++++.+..
T Consensus 162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a 203 (511)
T TIGR00561 162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 203 (511)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 45679999998 9999999999999999999999998865533
No 431
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=96.61 E-value=0.038 Score=47.22 Aligned_cols=60 Identities=17% Similarity=0.330 Sum_probs=46.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHH
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKT 104 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~ 104 (179)
..+++|.|. |.+|+.+++.|.++|.+++++|++++..++..+ .+ ...+..|.++++-+++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-----~g--~~v~~GDat~~~~L~~ 459 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRK-----YG--YKVYYGDATQLELLRA 459 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-----CC--CeEEEeeCCCHHHHHh
Confidence 357888887 899999999999999999999999887665432 12 3456778887766544
No 432
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=96.61 E-value=0.021 Score=44.51 Aligned_cols=76 Identities=20% Similarity=0.255 Sum_probs=46.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh--CCCcE
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPVDV 114 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~--~~id~ 114 (179)
++.++++|++|++|...++.....|++|+++++++++.+...+ .+.+.. .|..+.+..+++.+.. .++|+
T Consensus 144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-----~g~~~~---i~~~~~~~~~~v~~~~~~~~~d~ 215 (324)
T cd08291 144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-----IGAEYV---LNSSDPDFLEDLKELIAKLNATI 215 (324)
T ss_pred CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----cCCcEE---EECCCccHHHHHHHHhCCCCCcE
Confidence 3445555999999999999888899999999988776544322 233321 2222222222332221 25888
Q ss_pred EEecCC
Q 030328 115 LVVNQG 120 (179)
Q Consensus 115 li~~ag 120 (179)
++++.|
T Consensus 216 vid~~g 221 (324)
T cd08291 216 FFDAVG 221 (324)
T ss_pred EEECCC
Confidence 888765
No 433
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=96.60 E-value=0.023 Score=44.58 Aligned_cols=41 Identities=32% Similarity=0.379 Sum_probs=36.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEE 76 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~ 76 (179)
.+.+++|.|+++++|.++++.+...|++|+++.+++++.+.
T Consensus 165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~ 205 (341)
T cd08297 165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLEL 205 (341)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 57899999999999999999999999999999998766543
No 434
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=96.60 E-value=0.024 Score=44.40 Aligned_cols=77 Identities=21% Similarity=0.347 Sum_probs=48.4
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChh-------------------HHHHHHHHHHh-hcCceEEEEEeeCC
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGAR-VSILARSGE-------------------KLEEAKQSIQL-ATGIEVATYSADVR 97 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~~~-------------------~~~~~~~~~~~-~~~~~v~~~~~D~~ 97 (179)
+++|.|+ ||+|..+++.|+..|.. +.++|.+.- +.+...+.+.. .+..++..+..+++
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~ 79 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK 79 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence 4789998 89999999999999966 778876531 23333333332 23556666666776
Q ss_pred CHHHHHHHHHhhCCCcEEEecC
Q 030328 98 DFDAVKTALDEAGPVDVLVVNQ 119 (179)
Q Consensus 98 ~~~~v~~~~~~~~~id~li~~a 119 (179)
+.+...++++ ..|++|++.
T Consensus 80 ~~~~~~~f~~---~~DvVv~a~ 98 (312)
T cd01489 80 DPDFNVEFFK---QFDLVFNAL 98 (312)
T ss_pred CccchHHHHh---cCCEEEECC
Confidence 5322233443 466666654
No 435
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=96.58 E-value=0.017 Score=45.28 Aligned_cols=84 Identities=20% Similarity=0.191 Sum_probs=55.6
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHH-----HHHHHHhhcCceEEEEEeeCCCHHH--H-HH
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEE-----AKQSIQLATGIEVATYSADVRDFDA--V-KT 104 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~-----~~~~~~~~~~~~v~~~~~D~~~~~~--v-~~ 104 (179)
..+.||++.|.|- |.||+++|+.+...|++|+..++.....+. ..+++. ...++..+.+.+++... + ++
T Consensus 141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell--~~sDvv~lh~Plt~~T~~li~~~ 217 (311)
T PRK08410 141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELL--KTSDIISIHAPLNEKTKNLIAYK 217 (311)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHh--hcCCEEEEeCCCCchhhcccCHH
Confidence 3589999999999 999999999999999999999885421110 111221 24677778888776442 2 34
Q ss_pred HHHhhCCCcEEEecC
Q 030328 105 ALDEAGPVDVLVVNQ 119 (179)
Q Consensus 105 ~~~~~~~id~li~~a 119 (179)
.+++.++=-++||.+
T Consensus 218 ~~~~Mk~~a~lIN~a 232 (311)
T PRK08410 218 ELKLLKDGAILINVG 232 (311)
T ss_pred HHHhCCCCeEEEECC
Confidence 455554333455544
No 436
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.57 E-value=0.029 Score=41.13 Aligned_cols=40 Identities=23% Similarity=0.336 Sum_probs=35.5
Q ss_pred CCcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q 030328 31 VRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (179)
Q Consensus 31 ~~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~ 71 (179)
...++++|+++|.|+ |.+|...++.|.+.|++|++++++.
T Consensus 4 l~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~ 43 (202)
T PRK06718 4 LMIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL 43 (202)
T ss_pred eEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 345689999999999 9999999999999999999998754
No 437
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=96.57 E-value=0.021 Score=45.34 Aligned_cols=41 Identities=32% Similarity=0.349 Sum_probs=34.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChhHHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGEKLEEA 77 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~~~~~~~~ 77 (179)
.+++++|.|+ |++|...++.+...|++ |+++++++++.+..
T Consensus 176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~ 217 (358)
T TIGR03451 176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA 217 (358)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 5789999986 99999999998899996 88898887765543
No 438
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=96.56 E-value=0.07 Score=42.16 Aligned_cols=65 Identities=22% Similarity=0.221 Sum_probs=46.9
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHH---HHH-hhcCceEEEEEeeCCC
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQ---SIQ-LATGIEVATYSADVRD 98 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~---~~~-~~~~~~v~~~~~D~~~ 98 (179)
..++++++.|.|. |.||+++|+.|...|++|++.+++++......+ .+. .....++....+..+.
T Consensus 142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~ 210 (330)
T PRK12480 142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANK 210 (330)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcH
Confidence 3579999999998 889999999999999999999998754322111 111 1225567777777664
No 439
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.55 E-value=0.0053 Score=43.27 Aligned_cols=45 Identities=29% Similarity=0.423 Sum_probs=34.4
Q ss_pred CcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHH
Q 030328 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEE 76 (179)
Q Consensus 32 ~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~ 76 (179)
..+++||+++|.|.+.-+|+.++..|.++|++|..+..+.+..++
T Consensus 31 ~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~ 75 (160)
T PF02882_consen 31 GIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE 75 (160)
T ss_dssp T-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred CCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence 345899999999999999999999999999999988776554443
No 440
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.54 E-value=0.025 Score=44.70 Aligned_cols=40 Identities=25% Similarity=0.307 Sum_probs=35.8
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhH
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEK 73 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~ 73 (179)
..+.||++.|.|. |.||+++|+.+...|++|++.+|+.+.
T Consensus 146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~ 185 (333)
T PRK13243 146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKP 185 (333)
T ss_pred cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence 3579999999999 999999999999999999999987543
No 441
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.54 E-value=0.0083 Score=46.08 Aligned_cols=43 Identities=23% Similarity=0.271 Sum_probs=37.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChhHHHHHHHH
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGEKLEEAKQS 80 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~ 80 (179)
+++++|.|| ||.+++++..|++.|+. |++++|+.++.++..+.
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~ 165 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAEL 165 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 578999998 99999999999999975 99999998877766554
No 442
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=96.54 E-value=0.016 Score=45.36 Aligned_cols=36 Identities=22% Similarity=0.282 Sum_probs=32.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~ 71 (179)
.+++++|.|+++++|.++++.+...|++++++.++.
T Consensus 146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~ 181 (341)
T cd08290 146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDR 181 (341)
T ss_pred CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 578999999999999999999999999998888765
No 443
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.53 E-value=0.034 Score=40.60 Aligned_cols=38 Identities=18% Similarity=0.420 Sum_probs=31.8
Q ss_pred CcCcCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecC
Q 030328 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARS 70 (179)
Q Consensus 32 ~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~ 70 (179)
...+++++++|.|+ ||+|.++++.|+..|.. +.++|.+
T Consensus 16 Q~~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 16 QKRLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HHHHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence 34578899999997 66999999999999976 7788765
No 444
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=96.53 E-value=0.026 Score=45.30 Aligned_cols=37 Identities=27% Similarity=0.443 Sum_probs=32.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEK 73 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~ 73 (179)
.+.+++|.|+ |++|...++.....|++|+++++++++
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~ 214 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEK 214 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHH
Confidence 5789999987 899999999999999999998877554
No 445
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.53 E-value=0.022 Score=47.15 Aligned_cols=77 Identities=17% Similarity=0.173 Sum_probs=50.7
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhH-HHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEK-LEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
.++++++|.|+ |++|.++|+.|.++|++|.+++++++. .+...+.+.. .+.. ++..+-.. .....|
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~-~gv~--~~~~~~~~---------~~~~~D 80 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA-LGAT--VRLGPGPT---------LPEDTD 80 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH-cCCE--EEECCCcc---------ccCCCC
Confidence 56889999998 789999999999999999999976542 2222333332 2333 32222111 112579
Q ss_pred EEEecCCCCCC
Q 030328 114 VLVVNQGVFVP 124 (179)
Q Consensus 114 ~li~~ag~~~~ 124 (179)
.+|...|....
T Consensus 81 ~Vv~s~Gi~~~ 91 (480)
T PRK01438 81 LVVTSPGWRPD 91 (480)
T ss_pred EEEECCCcCCC
Confidence 99999887543
No 446
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.53 E-value=0.0091 Score=42.07 Aligned_cols=42 Identities=19% Similarity=0.304 Sum_probs=32.2
Q ss_pred CcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHH
Q 030328 32 RIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKL 74 (179)
Q Consensus 32 ~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~ 74 (179)
...+.||+++|.|- |.+|+.+|+.|...|++|++++.++.+.
T Consensus 18 ~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~a 59 (162)
T PF00670_consen 18 NLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRA 59 (162)
T ss_dssp -S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHH
T ss_pred ceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHH
Confidence 34579999999999 8999999999999999999999998643
No 447
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=96.52 E-value=0.023 Score=44.74 Aligned_cols=86 Identities=21% Similarity=0.196 Sum_probs=55.2
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHH------H-hhcCceEEEEEeeCCCHHH--H-
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSI------Q-LATGIEVATYSADVRDFDA--V- 102 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~------~-~~~~~~v~~~~~D~~~~~~--v- 102 (179)
..+.+|++.|.|. |+||+++|++|...|..+.-..|++...++..+.. . .....++..+.+.++.... +
T Consensus 158 ~~~~gK~vgilG~-G~IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pLt~~T~~liN 236 (336)
T KOG0069|consen 158 YDLEGKTVGILGL-GRIGKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPLTKETRHLIN 236 (336)
T ss_pred ccccCCEEEEecC-cHHHHHHHHhhhhccceeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCCCHHHHHHhh
Confidence 3578999999999 89999999999999955666666554333322211 1 1224566777777765332 2
Q ss_pred HHHHHhhCCCcEEEecC
Q 030328 103 KTALDEAGPVDVLVVNQ 119 (179)
Q Consensus 103 ~~~~~~~~~id~li~~a 119 (179)
++++++.++=-++||+|
T Consensus 237 k~~~~~mk~g~vlVN~a 253 (336)
T KOG0069|consen 237 KKFIEKMKDGAVLVNTA 253 (336)
T ss_pred HHHHHhcCCCeEEEecc
Confidence 33455555545677765
No 448
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=96.52 E-value=0.024 Score=44.93 Aligned_cols=34 Identities=29% Similarity=0.396 Sum_probs=30.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARS 70 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~ 70 (179)
.+++++|+|+ |++|...++.+...|++|++++++
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~ 205 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR 205 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence 6789999986 999999999888999999999984
No 449
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=96.51 E-value=0.024 Score=45.24 Aligned_cols=41 Identities=29% Similarity=0.355 Sum_probs=34.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLEEA 77 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~ 77 (179)
.+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+..
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a 226 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA 226 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 5889999986 8999999999889998 699999988765543
No 450
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.50 E-value=0.016 Score=43.37 Aligned_cols=75 Identities=24% Similarity=0.324 Sum_probs=52.0
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcE
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDV 114 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~ 114 (179)
+.++++|=.|++|| -++..+++.|++|+.+|-+++..+.....- ...+..+.+. ...++++....+.+|+
T Consensus 58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha-~e~gv~i~y~------~~~~edl~~~~~~FDv 127 (243)
T COG2227 58 LPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHA-LESGVNIDYR------QATVEDLASAGGQFDV 127 (243)
T ss_pred CCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhh-hhccccccch------hhhHHHHHhcCCCccE
Confidence 68999999999999 789999999999999999998776544322 2223332221 2234555554467888
Q ss_pred EEecC
Q 030328 115 LVVNQ 119 (179)
Q Consensus 115 li~~a 119 (179)
+++.-
T Consensus 128 V~cmE 132 (243)
T COG2227 128 VTCME 132 (243)
T ss_pred EEEhh
Confidence 77654
No 451
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.49 E-value=0.038 Score=43.31 Aligned_cols=39 Identities=21% Similarity=0.184 Sum_probs=34.8
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChh
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGE 72 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~ 72 (179)
..+++|++.|.|- |.||+++|+.|...|++|++++++.+
T Consensus 132 ~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~ 170 (312)
T PRK15469 132 YHREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRK 170 (312)
T ss_pred CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3578999999998 89999999999999999999987654
No 452
>PLN02602 lactate dehydrogenase
Probab=96.48 E-value=0.17 Score=40.36 Aligned_cols=76 Identities=18% Similarity=0.258 Sum_probs=50.7
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhc--CceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGEKLEEAKQSIQLAT--GIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
+++.|+|+ |.+|.++|..++.+|. +++++|.+++.++....++.-.. .... -+.. -.+. +....-|
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~-~~dy-------~~~~daD 107 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILA-STDY-------AVTAGSD 107 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEe-CCCH-------HHhCCCC
Confidence 69999997 9999999999998874 59999998876655555553211 0111 1111 1122 2234789
Q ss_pred EEEecCCCCC
Q 030328 114 VLVVNQGVFV 123 (179)
Q Consensus 114 ~li~~ag~~~ 123 (179)
++|..||...
T Consensus 108 iVVitAG~~~ 117 (350)
T PLN02602 108 LCIVTAGARQ 117 (350)
T ss_pred EEEECCCCCC
Confidence 9999999754
No 453
>PRK06487 glycerate dehydrogenase; Provisional
Probab=96.45 E-value=0.011 Score=46.42 Aligned_cols=64 Identities=17% Similarity=0.213 Sum_probs=45.2
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHH---HHHHHHHhhcCceEEEEEeeCCCHH
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLE---EAKQSIQLATGIEVATYSADVRDFD 100 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~---~~~~~~~~~~~~~v~~~~~D~~~~~ 100 (179)
.+.||++.|.|- |.||+++|+.+...|++|+..++...... ...+++. ...++..+.+.++...
T Consensus 145 ~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell--~~sDiv~l~lPlt~~T 211 (317)
T PRK06487 145 ELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELL--PQVDALTLHCPLTEHT 211 (317)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHH--HhCCEEEECCCCChHH
Confidence 589999999999 99999999999999999999887532110 0111221 2356677777766543
No 454
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.45 E-value=0.018 Score=42.95 Aligned_cols=36 Identities=22% Similarity=0.485 Sum_probs=33.2
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCe---EEEEecC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGAR---VSILARS 70 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~---v~~~~r~ 70 (179)
++++++++|.|| |+.|.+++..|.+.|.+ +++++|+
T Consensus 22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~ 60 (226)
T cd05311 22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK 60 (226)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence 578899999999 99999999999999975 9999998
No 455
>TIGR03736 PRTRC_ThiF PRTRC system ThiF family protein. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. This family is the PRTRC system ThiF family protein.
Probab=96.45 E-value=0.052 Score=41.00 Aligned_cols=36 Identities=17% Similarity=0.243 Sum_probs=30.0
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcC-----------CeEEEEecCh
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEG-----------ARVSILARSG 71 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g-----------~~v~~~~r~~ 71 (179)
.+..+++|.|+ ||+|..+++.|++.| .++.++|.+.
T Consensus 9 ~~~~~V~vvG~-GGlGs~v~~~Lar~G~a~~~~G~~~g~~i~lvD~D~ 55 (244)
T TIGR03736 9 SRPVSVVLVGA-GGTGSQVIAGLARLHHALKALGHPGGLAVTVYDDDT 55 (244)
T ss_pred hCCCeEEEEcC-ChHHHHHHHHHHHccccccccCCCCCCEEEEECCCE
Confidence 36779999999 899999999999864 2788888753
No 456
>PLN02928 oxidoreductase family protein
Probab=96.44 E-value=0.03 Score=44.53 Aligned_cols=38 Identities=29% Similarity=0.350 Sum_probs=34.8
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~ 71 (179)
..+.||++.|.|. |.||+++|+.+...|++|+.++|+.
T Consensus 155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~ 192 (347)
T PLN02928 155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW 192 (347)
T ss_pred cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence 3588999999999 9999999999999999999999863
No 457
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.44 E-value=0.045 Score=41.02 Aligned_cols=82 Identities=22% Similarity=0.279 Sum_probs=51.8
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChh-------------------HHHHHHHHHHh-hcCceEEEE
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGE-------------------KLEEAKQSIQL-ATGIEVATY 92 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~-------------------~~~~~~~~~~~-~~~~~v~~~ 92 (179)
.+++++++|.|+ ||+|..+++.|+..|. +++++|.+.- +.+...+.+.. ++..++..+
T Consensus 8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~ 86 (231)
T cd00755 8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV 86 (231)
T ss_pred HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence 367889999999 8999999999999996 5888886531 22333333332 234555555
Q ss_pred EeeCCCHHHHHHHHHhhCCCcEEEecC
Q 030328 93 SADVRDFDAVKTALDEAGPVDVLVVNQ 119 (179)
Q Consensus 93 ~~D~~~~~~v~~~~~~~~~id~li~~a 119 (179)
...++ ++...+++. ..+|++|.+.
T Consensus 87 ~~~i~-~~~~~~l~~--~~~D~Vvdai 110 (231)
T cd00755 87 EEFLT-PDNSEDLLG--GDPDFVVDAI 110 (231)
T ss_pred eeecC-HhHHHHHhc--CCCCEEEEcC
Confidence 55444 334444442 2467666654
No 458
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=96.44 E-value=0.046 Score=43.24 Aligned_cols=41 Identities=32% Similarity=0.404 Sum_probs=36.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEA 77 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~ 77 (179)
.+++++|.|+ |++|...++.+...|++|+++++++++.+..
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~ 206 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM 206 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence 5889999999 9999999999999999999999988765533
No 459
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=96.41 E-value=0.048 Score=43.21 Aligned_cols=39 Identities=33% Similarity=0.476 Sum_probs=33.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLE 75 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~ 75 (179)
.+++++|+| +|++|.++++.+...|+ +|+++++++++.+
T Consensus 177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~ 216 (361)
T cd08231 177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLE 216 (361)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 688999997 59999999999999999 8999988876554
No 460
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=96.41 E-value=0.04 Score=43.90 Aligned_cols=41 Identities=27% Similarity=0.321 Sum_probs=34.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLEEA 77 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~ 77 (179)
.+.+++|.|+ |++|...++.....|+ +|+.+++++++.+..
T Consensus 184 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~ 225 (365)
T cd08277 184 PGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA 225 (365)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence 5889999975 9999999998889998 689999887765533
No 461
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.41 E-value=0.24 Score=38.90 Aligned_cols=113 Identities=18% Similarity=0.239 Sum_probs=65.4
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhcC--ceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGEKLEEAKQSIQLATG--IEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
.++.|+|+ |.+|.++|..++.+|. +++++|.+++.++....++..... ....... -+|.+ . ....|
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~--~~dy~---~----~~~ad 73 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA--DKDYS---V----TANSK 73 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE--CCCHH---H----hCCCC
Confidence 47899997 9999999999998874 489999988766655555542110 1111111 12222 2 33689
Q ss_pred EEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEec
Q 030328 114 VLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMS 172 (179)
Q Consensus 114 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~is 172 (179)
++|.+||....+ .++..+ .++.|+.= .+...+.+.+.. ..+.++++|
T Consensus 74 ivvitaG~~~k~---g~~R~d---ll~~N~~i----~~~~~~~i~~~~--p~~~vivvs 120 (312)
T cd05293 74 VVIVTAGARQNE---GESRLD---LVQRNVDI----FKGIIPKLVKYS--PNAILLVVS 120 (312)
T ss_pred EEEECCCCCCCC---CCCHHH---HHHHHHHH----HHHHHHHHHHhC--CCcEEEEcc
Confidence 999999975432 234433 35555433 344444444432 223555554
No 462
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=96.40 E-value=0.029 Score=46.25 Aligned_cols=41 Identities=22% Similarity=0.220 Sum_probs=36.0
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHH
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKL 74 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~ 74 (179)
..+.||+++|.|.+ .||+.+|+++...|++|+++++++.+.
T Consensus 250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a 290 (476)
T PTZ00075 250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA 290 (476)
T ss_pred CCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence 45899999999985 799999999999999999998876543
No 463
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=96.40 E-value=0.032 Score=43.40 Aligned_cols=42 Identities=40% Similarity=0.510 Sum_probs=36.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEA 77 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~ 77 (179)
.+.+++|.|+++++|.++++.+...|++++.+.+++++.+..
T Consensus 140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 181 (334)
T PTZ00354 140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC 181 (334)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 578999999999999999999999999988888887655443
No 464
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=96.40 E-value=0.043 Score=44.53 Aligned_cols=43 Identities=21% Similarity=0.273 Sum_probs=35.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCC---eEEEEecChhHHHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGA---RVSILARSGEKLEEAK 78 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~---~v~~~~r~~~~~~~~~ 78 (179)
.+.+++|.|++|++|...++.+...|+ +|+++++++++.+...
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~ 220 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQ 220 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHH
Confidence 578999999999999999888777654 7999999988766443
No 465
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=96.39 E-value=0.053 Score=40.71 Aligned_cols=77 Identities=21% Similarity=0.300 Sum_probs=46.9
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChh-------------------HHHHHHHHHHh-hcCceEEEEEeeCC
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGAR-VSILARSGE-------------------KLEEAKQSIQL-ATGIEVATYSADVR 97 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~~~-------------------~~~~~~~~~~~-~~~~~v~~~~~D~~ 97 (179)
+++|.|+ ||+|..+++.|+..|.. +.++|.+.- +.+...+.+.. .+..++..+..+++
T Consensus 1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~ 79 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG 79 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence 3788886 89999999999999966 778777531 12222222322 23455666666665
Q ss_pred CHHHH-HHHHHhhCCCcEEEecC
Q 030328 98 DFDAV-KTALDEAGPVDVLVVNQ 119 (179)
Q Consensus 98 ~~~~v-~~~~~~~~~id~li~~a 119 (179)
+.++. .++++ .+|++|.+.
T Consensus 80 ~~~~~~~~f~~---~~DvVi~a~ 99 (234)
T cd01484 80 PEQDFNDTFFE---QFHIIVNAL 99 (234)
T ss_pred hhhhchHHHHh---CCCEEEECC
Confidence 43332 22333 567777654
No 466
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=96.38 E-value=0.097 Score=42.97 Aligned_cols=101 Identities=13% Similarity=0.052 Sum_probs=64.0
Q ss_pred EEEEEcCCCchHHHHHHHHHHc-------CC--eEEEEecChhHHHHHHHHHHhhc---CceEEEEEeeCCCHHHHHHHH
Q 030328 39 HVFITGGSSGIGLALAHQAAKE-------GA--RVSILARSGEKLEEAKQSIQLAT---GIEVATYSADVRDFDAVKTAL 106 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~-------g~--~v~~~~r~~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~v~~~~ 106 (179)
++.|+|++|.+|.++|..++.+ |. +++++|++++.++....++.... ..++. +.. .+.
T Consensus 102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~-i~~--~~y------- 171 (444)
T PLN00112 102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVS-IGI--DPY------- 171 (444)
T ss_pred EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceE-Eec--CCH-------
Confidence 6999999999999999999988 64 68999999988776666664211 11211 111 121
Q ss_pred HhhCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHh
Q 030328 107 DEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKK 159 (179)
Q Consensus 107 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 159 (179)
+.+...|++|..||....+ .++..+ .++.|+.= .+...+.+.+
T Consensus 172 e~~kdaDiVVitAG~prkp---G~tR~d---Ll~~N~~I----~k~i~~~I~~ 214 (444)
T PLN00112 172 EVFQDAEWALLIGAKPRGP---GMERAD---LLDINGQI----FAEQGKALNE 214 (444)
T ss_pred HHhCcCCEEEECCCCCCCC---CCCHHH---HHHHHHHH----HHHHHHHHHH
Confidence 2334789999999974322 123333 46666543 3444445544
No 467
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=96.38 E-value=0.042 Score=42.91 Aligned_cols=42 Identities=29% Similarity=0.430 Sum_probs=36.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEA 77 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~ 77 (179)
.+.+++|.|+++.+|.++++.+...|++++++++++++.+..
T Consensus 162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~ 203 (334)
T PRK13771 162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV 203 (334)
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 578999999999999999999999999999999887765543
No 468
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=96.36 E-value=0.035 Score=43.52 Aligned_cols=41 Identities=29% Similarity=0.388 Sum_probs=35.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEA 77 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~ 77 (179)
.+++++|.| ++++|.++++.+...|++|+.+++++++.+..
T Consensus 163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~ 203 (333)
T cd08296 163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA 203 (333)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Confidence 578999999 79999999999999999999999987765543
No 469
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=96.34 E-value=0.041 Score=42.96 Aligned_cols=41 Identities=32% Similarity=0.405 Sum_probs=34.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChhHHHHH
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKE-GARVSILARSGEKLEEA 77 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~ 77 (179)
+.+++|.|+++++|.++++..... |++|+.+++++++.+..
T Consensus 149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l 190 (336)
T TIGR02817 149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV 190 (336)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH
Confidence 789999999999999998877777 99999998887654433
No 470
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=96.33 E-value=0.035 Score=43.79 Aligned_cols=76 Identities=24% Similarity=0.313 Sum_probs=48.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh--CCC
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA--GPV 112 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~--~~i 112 (179)
.+++++|.|+ +++|...++.+...|+ +|+++++++++.+.. .++ +.+. ..|..+.+-.+++.+.. +++
T Consensus 172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~----ga~~---~i~~~~~~~~~~l~~~~~~~~~ 242 (351)
T cd08233 172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL----GATI---VLDPTEVDVVAEVRKLTGGGGV 242 (351)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh----CCCE---EECCCccCHHHHHHHHhCCCCC
Confidence 5889999985 8999999999999999 788888887765433 222 3322 12333322222332221 248
Q ss_pred cEEEecCC
Q 030328 113 DVLVVNQG 120 (179)
Q Consensus 113 d~li~~ag 120 (179)
|+++++.|
T Consensus 243 d~vid~~g 250 (351)
T cd08233 243 DVSFDCAG 250 (351)
T ss_pred CEEEECCC
Confidence 88888876
No 471
>PRK14851 hypothetical protein; Provisional
Probab=96.33 E-value=0.052 Score=46.95 Aligned_cols=81 Identities=22% Similarity=0.276 Sum_probs=56.1
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecCh-------------------hHHHHHHHHHHh-hcCceEEEE
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSG-------------------EKLEEAKQSIQL-ATGIEVATY 92 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~~-------------------~~~~~~~~~~~~-~~~~~v~~~ 92 (179)
.+++++|+|.|+ ||+|..++..|+..|.. +.++|.+. .+.+...+.+.. ++..++..+
T Consensus 40 kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~ 118 (679)
T PRK14851 40 RLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF 118 (679)
T ss_pred HHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence 478999999997 89999999999999965 77777642 123333333332 345677777
Q ss_pred EeeCCCHHHHHHHHHhhCCCcEEEecC
Q 030328 93 SADVRDFDAVKTALDEAGPVDVLVVNQ 119 (179)
Q Consensus 93 ~~D~~~~~~v~~~~~~~~~id~li~~a 119 (179)
...++ .++++++++ .+|++|.+.
T Consensus 119 ~~~i~-~~n~~~~l~---~~DvVid~~ 141 (679)
T PRK14851 119 PAGIN-ADNMDAFLD---GVDVVLDGL 141 (679)
T ss_pred ecCCC-hHHHHHHHh---CCCEEEECC
Confidence 77776 455666666 578877554
No 472
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.30 E-value=0.017 Score=44.56 Aligned_cols=43 Identities=35% Similarity=0.407 Sum_probs=36.9
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHH
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLE 75 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~ 75 (179)
.+++||+++|.|.|.-+|+.++..|.++|++|.++....+.++
T Consensus 153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~ 195 (285)
T PRK14191 153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLS 195 (285)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHH
Confidence 4679999999999999999999999999999988766544443
No 473
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=96.29 E-value=0.075 Score=41.41 Aligned_cols=111 Identities=19% Similarity=0.281 Sum_probs=64.6
Q ss_pred EEEEcCCCchHHHHHHHHHHcC--CeEEEEecChhHHHHHHHHHHhhcCc--eEEEEEeeCCCHHHHHHHHHhhCCCcEE
Q 030328 40 VFITGGSSGIGLALAHQAAKEG--ARVSILARSGEKLEEAKQSIQLATGI--EVATYSADVRDFDAVKTALDEAGPVDVL 115 (179)
Q Consensus 40 vlItGa~~~iG~~la~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~--~v~~~~~D~~~~~~v~~~~~~~~~id~l 115 (179)
+.|.|+ |++|.++|..++.+| .+++++|.+++..+....++...... ....... ++ .+.....|++
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~-------~~~l~~aDiV 70 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD-------YADAADADIV 70 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC-------HHHhCCCCEE
Confidence 357887 679999999999998 67999999988777666666432111 1111111 11 1233478999
Q ss_pred EecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEec
Q 030328 116 VVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMS 172 (179)
Q Consensus 116 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~is 172 (179)
|.++|....+ .++..+ .+..|+. +.+...+.+++.. ..+.++++|
T Consensus 71 Iitag~p~~~---~~~R~~---l~~~n~~----i~~~~~~~i~~~~--p~~~viv~s 115 (300)
T cd00300 71 VITAGAPRKP---GETRLD---LINRNAP----ILRSVITNLKKYG--PDAIILVVS 115 (300)
T ss_pred EEcCCCCCCC---CCCHHH---HHHHHHH----HHHHHHHHHHHhC--CCeEEEEcc
Confidence 9999974432 123332 3444443 3344444444433 233566554
No 474
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=96.29 E-value=0.048 Score=42.94 Aligned_cols=116 Identities=14% Similarity=0.067 Sum_probs=63.8
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecChh--HHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhh
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGA-------RVSILARSGE--KLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEA 109 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~-------~v~~~~r~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~ 109 (179)
++.|+||+|.+|.++|..|..+|. +++++|.++. .++....++.......... ..++. .-.+..
T Consensus 5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~--~~i~~-----~~~~~~ 77 (323)
T TIGR01759 5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAG--VVATT-----DPEEAF 77 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCC--cEEec-----ChHHHh
Confidence 689999999999999999998874 6899998652 2343333332110000000 00110 112233
Q ss_pred CCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEec
Q 030328 110 GPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMS 172 (179)
Q Consensus 110 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~is 172 (179)
...|++|..||.... + ..+..+ .++.|+.-. +...+.+.+... ..+.++++|
T Consensus 78 ~daDvVVitAG~~~k-~--g~tR~d---ll~~Na~i~----~~i~~~i~~~~~-~~~iiivvs 129 (323)
T TIGR01759 78 KDVDAALLVGAFPRK-P--GMERAD---LLSKNGKIF----KEQGKALNKVAK-KDVKVLVVG 129 (323)
T ss_pred CCCCEEEEeCCCCCC-C--CCcHHH---HHHHHHHHH----HHHHHHHHhhCC-CCeEEEEeC
Confidence 478999999997532 1 234333 466666444 444444444422 123555544
No 475
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=96.28 E-value=0.054 Score=42.55 Aligned_cols=36 Identities=36% Similarity=0.539 Sum_probs=32.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~ 71 (179)
.+.+++|.|+++++|.++++.+...|++++.++++.
T Consensus 177 ~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~ 212 (350)
T cd08274 177 AGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA 212 (350)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch
Confidence 588999999999999999999999999998887654
No 476
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=96.28 E-value=0.047 Score=43.03 Aligned_cols=40 Identities=33% Similarity=0.452 Sum_probs=33.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChhHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARSGEKLEE 76 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~~~~~~~ 76 (179)
.+++++|.|+ |++|...++.+...|++ |+++++++++.+.
T Consensus 160 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~ 200 (347)
T PRK10309 160 EGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLAL 200 (347)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence 5789999975 99999999999999998 6788888776553
No 477
>PRK07411 hypothetical protein; Validated
Probab=96.27 E-value=0.055 Score=43.75 Aligned_cols=36 Identities=25% Similarity=0.362 Sum_probs=31.5
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARS 70 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~ 70 (179)
.+++.+|+|.|+ ||+|..+++.|+..|.. +.++|.+
T Consensus 35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D 71 (390)
T PRK07411 35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFD 71 (390)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 467889999999 89999999999999965 7787765
No 478
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=96.27 E-value=0.037 Score=43.08 Aligned_cols=41 Identities=22% Similarity=0.332 Sum_probs=35.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEE 76 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~ 76 (179)
.+.+++|.|+++.+|.++++.+...|++++.+++++++.+.
T Consensus 140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~ 180 (327)
T PRK10754 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQR 180 (327)
T ss_pred CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 57899999999999999999999999999999888765543
No 479
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.26 E-value=0.015 Score=41.28 Aligned_cols=42 Identities=26% Similarity=0.366 Sum_probs=33.5
Q ss_pred cCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 030328 35 IKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEA 77 (179)
Q Consensus 35 ~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~ 77 (179)
+...+++|+|+ |..|...++-+...|++++..+.+.+..++.
T Consensus 18 ~~p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~ 59 (168)
T PF01262_consen 18 VPPAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQL 59 (168)
T ss_dssp E-T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHH
T ss_pred CCCeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhh
Confidence 45678999996 8999999999999999999999987765543
No 480
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=96.26 E-value=0.03 Score=35.03 Aligned_cols=36 Identities=28% Similarity=0.495 Sum_probs=31.1
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEec
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKE-GARVSILAR 69 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~-g~~v~~~~r 69 (179)
.++++|+++|.|+ |..|+.+++.+.+. +.++.+++|
T Consensus 19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 3468899999999 99999999999998 566777777
No 481
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=96.26 E-value=0.056 Score=42.44 Aligned_cols=75 Identities=25% Similarity=0.371 Sum_probs=47.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCHHHHHHHHHhhCCCcEE
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDFDAVKTALDEAGPVDVL 115 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~v~~~~~~~~~id~l 115 (179)
.+.+++|+|+++++|.++++.....|++|+.+.++ ++.+ ..+++ +.+. ..|..+.+..+++. ..+.+|.+
T Consensus 162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~-~~~~~----g~~~---~~~~~~~~~~~~l~-~~~~vd~v 231 (350)
T cd08248 162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIP-LVKSL----GADD---VIDYNNEDFEEELT-ERGKFDVI 231 (350)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHH-HHHHh----CCce---EEECCChhHHHHHH-hcCCCCEE
Confidence 48999999999999999999999999998887764 2221 22222 2221 12333333233332 23468888
Q ss_pred EecCC
Q 030328 116 VVNQG 120 (179)
Q Consensus 116 i~~ag 120 (179)
+++.|
T Consensus 232 i~~~g 236 (350)
T cd08248 232 LDTVG 236 (350)
T ss_pred EECCC
Confidence 88765
No 482
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=96.25 E-value=0.046 Score=42.37 Aligned_cols=40 Identities=30% Similarity=0.388 Sum_probs=35.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHH
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEE 76 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~ 76 (179)
+.+++|.|+++++|.++++.....|++|+++++++++.+.
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~ 186 (325)
T cd05280 147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADY 186 (325)
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 4689999999999999999888999999999998765543
No 483
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=96.25 E-value=0.033 Score=43.51 Aligned_cols=93 Identities=19% Similarity=0.279 Sum_probs=56.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhc---CceEEEEEeeCCCHHHHHHHHHhhCCC
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGA--RVSILARSGEKLEEAKQSIQLAT---GIEVATYSADVRDFDAVKTALDEAGPV 112 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~v~~~~~~~~~i 112 (179)
+++.|+|| |++|.++|..|..++. .++++|.+++..+-...++.... +.. ..+..| .+ .+.+...
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~-~~i~~~-~~-------y~~~~~a 70 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSD-VKITGD-GD-------YEDLKGA 70 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCc-eEEecC-CC-------hhhhcCC
Confidence 46889999 9999999999988763 68999998655444333332110 111 111221 11 2333478
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHH
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGS 146 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 146 (179)
|+++..||....+. ++.++ .++.|+.=.
T Consensus 71 DiVvitAG~prKpG---mtR~D---Ll~~Na~I~ 98 (313)
T COG0039 71 DIVVITAGVPRKPG---MTRLD---LLEKNAKIV 98 (313)
T ss_pred CEEEEeCCCCCCCC---CCHHH---HHHhhHHHH
Confidence 99999999765432 34444 356665433
No 484
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=96.25 E-value=0.065 Score=43.36 Aligned_cols=36 Identities=22% Similarity=0.396 Sum_probs=31.4
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecC
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGAR-VSILARS 70 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~-v~~~~r~ 70 (179)
.+++.+|+|.|+ ||+|..++..|+..|.. +.++|.+
T Consensus 39 ~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D 75 (392)
T PRK07878 39 RLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFD 75 (392)
T ss_pred HHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence 467889999999 89999999999999965 7788765
No 485
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=96.25 E-value=0.013 Score=40.81 Aligned_cols=42 Identities=33% Similarity=0.489 Sum_probs=35.1
Q ss_pred EEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHHHHHh
Q 030328 40 VFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQSIQL 83 (179)
Q Consensus 40 vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~ 83 (179)
|+.+|+.+-+|+++|..|.++|.+|.+. +.++.+.+..++..
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~~ 42 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAPE 42 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcCH
Confidence 5789999999999999999999999988 55666766666543
No 486
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=96.24 E-value=0.015 Score=47.20 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=37.1
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHH
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEE 76 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~ 76 (179)
.+.|++++|.|+ |.||+.+++.+...|++|+++++++.+.+.
T Consensus 199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~ 240 (413)
T cd00401 199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQ 240 (413)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHH
Confidence 468999999999 799999999999999999999998776543
No 487
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.22 E-value=0.012 Score=45.62 Aligned_cols=39 Identities=21% Similarity=0.244 Sum_probs=35.4
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cCh
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILA-RSG 71 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~-r~~ 71 (179)
.+++||++.|.|.++-+|+.+|..|.++|++|.++. |+.
T Consensus 154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~ 193 (296)
T PRK14188 154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR 193 (296)
T ss_pred CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence 357999999999999999999999999999999985 554
No 488
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.22 E-value=0.35 Score=37.86 Aligned_cols=104 Identities=17% Similarity=0.238 Sum_probs=62.1
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChhHHHHHHHHHHhhc----CceEEEEEeeCCCHHHHHHHHHhhCCC
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGA--RVSILARSGEKLEEAKQSIQLAT----GIEVATYSADVRDFDAVKTALDEAGPV 112 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~v~~~~~~~~~i 112 (179)
++.|.|+ |.+|..+|..++.+|. +++++|.+++.++....++.-.. ...+.... .+ .+.....
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~-------y~~~~~a 69 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GD-------YDDCADA 69 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CC-------HHHhCCC
Confidence 3678898 9999999999998874 59999998876665555554211 11233222 22 2334478
Q ss_pred cEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhcc
Q 030328 113 DVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQ 161 (179)
Q Consensus 113 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 161 (179)
|++|..||....+. .+.+ =.+.++.|+. +.+...|.+.+..
T Consensus 70 DivvitaG~~~kpg---~tr~-R~dll~~N~~----I~~~i~~~i~~~~ 110 (307)
T cd05290 70 DIIVITAGPSIDPG---NTDD-RLDLAQTNAK----IIREIMGNITKVT 110 (307)
T ss_pred CEEEECCCCCCCCC---CCch-HHHHHHHHHH----HHHHHHHHHHHhC
Confidence 99999999754321 2310 1223555553 4455555555443
No 489
>PRK06223 malate dehydrogenase; Reviewed
Probab=96.20 E-value=0.13 Score=40.12 Aligned_cols=76 Identities=22% Similarity=0.339 Sum_probs=48.5
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhc---CceEEEEEeeCCCHHHHHHHHHhhCCCc
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLEEAKQSIQLAT---GIEVATYSADVRDFDAVKTALDEAGPVD 113 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~v~~~~~~~~~id 113 (179)
+++.|.|+ |.+|..+|..++..|. +|+++|++++.++....++.... +.... +.. .++. + .....|
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~-i~~-~~d~---~----~~~~aD 72 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTK-ITG-TNDY---E----DIAGSD 72 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcE-EEe-CCCH---H----HHCCCC
Confidence 57899999 9999999999999874 89999998876544333322110 11111 111 1222 1 223689
Q ss_pred EEEecCCCCC
Q 030328 114 VLVVNQGVFV 123 (179)
Q Consensus 114 ~li~~ag~~~ 123 (179)
++|..+|...
T Consensus 73 iVii~~~~p~ 82 (307)
T PRK06223 73 VVVITAGVPR 82 (307)
T ss_pred EEEECCCCCC
Confidence 9999998643
No 490
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=96.20 E-value=0.07 Score=42.56 Aligned_cols=76 Identities=26% Similarity=0.348 Sum_probs=49.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHHHHHHHHHhhcCceEEEEEeeCCCH-HHHHHHHHhh--CC
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLEEAKQSIQLATGIEVATYSADVRDF-DAVKTALDEA--GP 111 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~v~~~~~~~--~~ 111 (179)
.+.+++|.|+ |++|...++.+...|+ +|+++++++++.+.. +++ +.+.. .|..+. +++.+.+.+. ++
T Consensus 186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l----Ga~~~---i~~~~~~~~~~~~v~~~~~~g 256 (368)
T cd08300 186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF----GATDC---VNPKDHDKPIQQVLVEMTDGG 256 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc----CCCEE---EcccccchHHHHHHHHHhCCC
Confidence 5889999985 8999999999999999 699999988766533 222 33221 233322 1233322221 36
Q ss_pred CcEEEecCC
Q 030328 112 VDVLVVNQG 120 (179)
Q Consensus 112 id~li~~ag 120 (179)
+|+++.+.|
T Consensus 257 ~d~vid~~g 265 (368)
T cd08300 257 VDYTFECIG 265 (368)
T ss_pred CcEEEECCC
Confidence 888888876
No 491
>PRK06932 glycerate dehydrogenase; Provisional
Probab=96.19 E-value=0.032 Score=43.74 Aligned_cols=83 Identities=12% Similarity=0.222 Sum_probs=53.9
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHH-H---HHHHHHHhhcCceEEEEEeeCCCHHH--H-HHHH
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKL-E---EAKQSIQLATGIEVATYSADVRDFDA--V-KTAL 106 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~-~---~~~~~~~~~~~~~v~~~~~D~~~~~~--v-~~~~ 106 (179)
.++||++.|.|- |.||+++|+.+...|++|+..++..... . ...+++. ...++..+.+.++.... + ++.+
T Consensus 144 ~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell--~~sDiv~l~~Plt~~T~~li~~~~l 220 (314)
T PRK06932 144 DVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVL--KQADIVTLHCPLTETTQNLINAETL 220 (314)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHH--HhCCEEEEcCCCChHHhcccCHHHH
Confidence 588999999999 9999999999999999999888754211 0 0111221 24677777777776432 1 3345
Q ss_pred HhhCCCcEEEecC
Q 030328 107 DEAGPVDVLVVNQ 119 (179)
Q Consensus 107 ~~~~~id~li~~a 119 (179)
++.++=-++||.+
T Consensus 221 ~~mk~ga~lIN~a 233 (314)
T PRK06932 221 ALMKPTAFLINTG 233 (314)
T ss_pred HhCCCCeEEEECC
Confidence 5554333455544
No 492
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.19 E-value=0.015 Score=47.73 Aligned_cols=38 Identities=29% Similarity=0.439 Sum_probs=33.7
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHH
Q 030328 39 HVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEE 76 (179)
Q Consensus 39 ~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~ 76 (179)
++.|.||.|.+|.++++.|.+.|++|.+++|+++..++
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~ 39 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKE 39 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHH
Confidence 68999999999999999999999999999998766433
No 493
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=96.19 E-value=0.054 Score=43.55 Aligned_cols=42 Identities=31% Similarity=0.351 Sum_probs=36.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEA 77 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~ 77 (179)
.+.+++|+|++|++|.++++.+...|++++++++++++.+..
T Consensus 193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~ 234 (393)
T cd08246 193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC 234 (393)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence 578999999999999999999999999998888887765543
No 494
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=96.19 E-value=0.071 Score=42.00 Aligned_cols=83 Identities=14% Similarity=0.145 Sum_probs=52.9
Q ss_pred CcCCcEEEEEcCCCchHHHHHHHHH-HcCCeEEEEecChhHHH--H------HHHHHHhhcCceEEEEEeeCCCHHH--H
Q 030328 34 PIKDRHVFITGGSSGIGLALAHQAA-KEGARVSILARSGEKLE--E------AKQSIQLATGIEVATYSADVRDFDA--V 102 (179)
Q Consensus 34 ~~~~k~vlItGa~~~iG~~la~~l~-~~g~~v~~~~r~~~~~~--~------~~~~~~~~~~~~v~~~~~D~~~~~~--v 102 (179)
.+.||++.|.|- |.||+++|+.+. ..|++|+..++...... . ..+++. ...++..+.+.++.... +
T Consensus 142 ~L~gktvGIiG~-G~IG~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~~~l~ell--~~sDvv~lh~plt~~T~~li 218 (323)
T PRK15409 142 DVHHKTLGIVGM-GRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLL--QESDFVCIILPLTDETHHLF 218 (323)
T ss_pred CCCCCEEEEEcc-cHHHHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEecCHHHHH--HhCCEEEEeCCCChHHhhcc
Confidence 589999999999 999999999997 78999998887632111 1 011121 24667777777775432 1
Q ss_pred -HHHHHhhCCCcEEEecC
Q 030328 103 -KTALDEAGPVDVLVVNQ 119 (179)
Q Consensus 103 -~~~~~~~~~id~li~~a 119 (179)
++.+++.++=-++||.+
T Consensus 219 ~~~~l~~mk~ga~lIN~a 236 (323)
T PRK15409 219 GAEQFAKMKSSAIFINAG 236 (323)
T ss_pred CHHHHhcCCCCeEEEECC
Confidence 23444444333455543
No 495
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.18 E-value=0.025 Score=35.94 Aligned_cols=41 Identities=34% Similarity=0.413 Sum_probs=32.8
Q ss_pred EEEEcCCCchHHHHHHHHHHcC---CeEEEE-ecChhHHHHHHHHH
Q 030328 40 VFITGGSSGIGLALAHQAAKEG---ARVSIL-ARSGEKLEEAKQSI 81 (179)
Q Consensus 40 vlItGa~~~iG~~la~~l~~~g---~~v~~~-~r~~~~~~~~~~~~ 81 (179)
+.+.|+ |.+|.++++.|.+.| .+|.++ +|++++.++..++.
T Consensus 2 I~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~ 46 (96)
T PF03807_consen 2 IGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY 46 (96)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred EEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence 445555 999999999999999 889855 99988877666544
No 496
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.17 E-value=0.024 Score=43.86 Aligned_cols=42 Identities=26% Similarity=0.324 Sum_probs=36.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChhHHHHHHH
Q 030328 37 DRHVFITGGSSGIGLALAHQAAKEGARVSILARSGEKLEEAKQ 79 (179)
Q Consensus 37 ~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~ 79 (179)
-+++.|.|+ |.+|..+|..|+++|++|++.+++++..+...+
T Consensus 4 ~~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 45 (292)
T PRK07530 4 IKKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEAGLA 45 (292)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 367888888 899999999999999999999999887665443
No 497
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=96.16 E-value=0.056 Score=43.25 Aligned_cols=41 Identities=22% Similarity=0.358 Sum_probs=34.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChhHHHHH
Q 030328 36 KDRHVFITGGSSGIGLALAHQAAKEGA-RVSILARSGEKLEEA 77 (179)
Q Consensus 36 ~~k~vlItGa~~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~ 77 (179)
.+.+++|.| ++++|.++++.+...|+ +|++++++.++.+..
T Consensus 190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a 231 (373)
T cd08299 190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA 231 (373)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 478999996 58999999999999999 799999887765544
No 498
>PRK07574 formate dehydrogenase; Provisional
Probab=96.16 E-value=0.055 Score=43.65 Aligned_cols=38 Identities=21% Similarity=0.253 Sum_probs=34.7
Q ss_pred cCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q 030328 33 IPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILARSG 71 (179)
Q Consensus 33 ~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r~~ 71 (179)
..+.+|++.|.|. |.||+++|++|...|++|+..+|..
T Consensus 188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~ 225 (385)
T PRK07574 188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHR 225 (385)
T ss_pred eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC
Confidence 3589999999999 7899999999999999999999875
No 499
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.15 E-value=0.01 Score=41.79 Aligned_cols=39 Identities=26% Similarity=0.438 Sum_probs=34.4
Q ss_pred CCCcCcCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec
Q 030328 30 PVRIPIKDRHVFITGGSSGIGLALAHQAAKEGARVSILAR 69 (179)
Q Consensus 30 ~~~~~~~~k~vlItGa~~~iG~~la~~l~~~g~~v~~~~r 69 (179)
+...+++|++++|.|| |.+|...++.|.+.|++|.+++.
T Consensus 6 P~~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp 44 (157)
T PRK06719 6 PLMFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP 44 (157)
T ss_pred ceEEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence 3455789999999998 89999999999999999998854
No 500
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.15 E-value=0.024 Score=44.58 Aligned_cols=114 Identities=14% Similarity=0.115 Sum_probs=64.5
Q ss_pred cEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecChhH--HHHHHHHHHhhc---CceEEEEEeeCCCHHHHHHH
Q 030328 38 RHVFITGGSSGIGLALAHQAAKEGA-------RVSILARSGEK--LEEAKQSIQLAT---GIEVATYSADVRDFDAVKTA 105 (179)
Q Consensus 38 k~vlItGa~~~iG~~la~~l~~~g~-------~v~~~~r~~~~--~~~~~~~~~~~~---~~~v~~~~~D~~~~~~v~~~ 105 (179)
+++.|+||+|.+|.++|..++.+|. +++++|.+++. ++....++.... ..++. ++. ++
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~~-~~---- 72 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV-----ITD-DP---- 72 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE-----Eec-Cc----
Confidence 4789999999999999999998874 68999986432 332222332110 01111 111 11
Q ss_pred HHhhCCCcEEEecCCCCCCCCcccCCHHHHHHHHHhhhhHHHHHHHHHcHHHHhccCCCCcEEEEec
Q 030328 106 LDEAGPVDVLVVNQGVFVPGELEVQSLDEVRLMIDVNIIGSFHMIKAALPLIKKRQNGGPASIALMS 172 (179)
Q Consensus 106 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~iv~is 172 (179)
.+.....|++|.+||....+ ..+..+ .++.|+. +.+...+.+.+... ..+.++++|
T Consensus 73 ~~~~~daDivvitaG~~~k~---g~tR~d---ll~~N~~----i~~~i~~~i~~~~~-~~~iiivvs 128 (322)
T cd01338 73 NVAFKDADWALLVGAKPRGP---GMERAD---LLKANGK----IFTAQGKALNDVAS-RDVKVLVVG 128 (322)
T ss_pred HHHhCCCCEEEEeCCCCCCC---CCcHHH---HHHHHHH----HHHHHHHHHHhhCC-CCeEEEEec
Confidence 22334789999999975432 133333 3666654 34555555554431 123555554
Done!