Your job contains 1 sequence.
>030330
MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYM
RFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGAAALARLKAYEGVPAPYDKV
KRMVIPDALKVLRLQKGHKYCLLGRLASEVGWNYYDTIRVGFSSSCFITILCFLFPGSH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030330
(179 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2156569 - symbol:AT5G48760 species:3702 "Arabi... 730 3.2e-72 1
TAIR|locus:2098530 - symbol:AT3G07110 species:3702 "Arabi... 722 2.3e-71 1
TAIR|locus:2087268 - symbol:AT3G24830 species:3702 "Arabi... 720 3.7e-71 1
TAIR|locus:2119335 - symbol:AT4G13170 species:3702 "Arabi... 714 1.6e-70 1
UNIPROTKB|Q3SZ90 - symbol:RPL13A "60S ribosomal protein L... 469 1.5e-44 1
UNIPROTKB|F1PI16 - symbol:RPL13A "60S ribosomal protein L... 469 1.5e-44 1
UNIPROTKB|P40429 - symbol:RPL13A "60S ribosomal protein L... 469 1.5e-44 1
UNIPROTKB|F1RI01 - symbol:RPL13A "60S ribosomal protein L... 469 1.5e-44 1
UNIPROTKB|Q4R8Z2 - symbol:RPL13A "60S ribosomal protein L... 469 1.5e-44 1
UNIPROTKB|Q5RA38 - symbol:RPL13A "60S ribosomal protein L... 469 1.5e-44 1
RGD|628697 - symbol:Rpl13a "ribosomal protein L13A" speci... 466 3.1e-44 1
MGI|MGI:1351455 - symbol:Rpl13a "ribosomal protein L13A" ... 465 3.9e-44 1
UNIPROTKB|Q5RK10 - symbol:Rpl13a "Neuroprotective protein... 465 3.9e-44 1
ZFIN|ZDB-GENE-030131-168 - symbol:rpl13a "ribosomal prote... 462 8.1e-44 1
UNIPROTKB|Q9XSU0 - symbol:RPL13A "60S ribosomal protein L... 455 4.5e-43 1
POMBASE|SPAC23A1.11 - symbol:rpl1602 "60S ribosomal prote... 455 4.5e-43 1
POMBASE|SPBC839.13c - symbol:rpl1601 "60S ribosomal prote... 455 4.5e-43 1
FB|FBgn0037351 - symbol:RpL13A "Ribosomal protein L13A" s... 452 9.3e-43 1
GENEDB_PFALCIPARUM|PF10_0043 - symbol:PF10_0043 "ribosoma... 449 1.9e-42 1
UNIPROTKB|Q8IJZ7 - symbol:PF10_0043 "60S ribosomal protei... 449 1.9e-42 1
ASPGD|ASPL0000014757 - symbol:rpl16a species:162425 "Emer... 447 3.2e-42 1
UNIPROTKB|G4MLS0 - symbol:MGG_05449 "60S ribosomal protei... 443 8.4e-42 1
POMBASE|SPBC2G2.05 - symbol:rpl1603 "60S ribosomal protei... 437 3.6e-41 1
WB|WBGene00004428 - symbol:rpl-16 species:6239 "Caenorhab... 433 9.6e-41 1
CGD|CAL0005216 - symbol:RPL16A species:5476 "Candida albi... 428 3.3e-40 1
DICTYBASE|DDB_G0275881 - symbol:rpl13a "S60 ribosomal pro... 428 3.3e-40 1
UNIPROTKB|Q95307 - symbol:RPL13A "60S ribosomal protein L... 428 3.3e-40 1
UNIPROTKB|Q5AB87 - symbol:RPL16A "Likely cytosolic riboso... 428 3.3e-40 1
SGD|S000001395 - symbol:RPL16A "Ribosomal 60S subunit pro... 421 1.8e-39 1
SGD|S000005013 - symbol:RPL16B "Ribosomal 60S subunit pro... 411 2.1e-38 1
UNIPROTKB|I3LN23 - symbol:I3LN23 "Uncharacterized protein... 346 1.6e-31 1
UNIPROTKB|G3MXM1 - symbol:G3MXM1 "Uncharacterized protein... 339 8.8e-31 1
UNIPROTKB|I3L8K3 - symbol:I3L8K3 "Uncharacterized protein... 299 1.5e-26 1
UNIPROTKB|F1RU15 - symbol:F1RU15 "Uncharacterized protein... 277 3.3e-24 1
UNIPROTKB|J9P546 - symbol:J9P546 "Uncharacterized protein... 230 3.1e-19 1
UNIPROTKB|Q6NVV1 - symbol:Q6NVV1 "Putative 60S ribosomal ... 161 6.4e-12 1
UNIPROTKB|E2QS54 - symbol:E2QS54 "Uncharacterized protein... 151 7.4e-11 1
UNIPROTKB|F6UMX6 - symbol:F6UMX6 "Uncharacterized protein... 96 5.3e-05 1
TAIR|locus:2203010 - symbol:emb1473 "embryo defective 147... 107 0.00020 1
>TAIR|locus:2156569 [details] [associations]
symbol:AT5G48760 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015934 "large ribosomal subunit" evidence=IEA;ISS] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009664 "plant-type cell wall organization"
evidence=RCA] [GO:0042545 "cell wall modification" evidence=RCA]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006412 GO:GO:0003735
EMBL:AB012242 GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872
ProtClustDB:CLSN2684535 Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
EMBL:AY090359 EMBL:AY122902 EMBL:AY088191 EMBL:Z26407
IPI:IPI00531944 RefSeq:NP_001078737.1 RefSeq:NP_199687.1
UniGene:At.20766 UniGene:At.25519 UniGene:At.72564
ProteinModelPortal:Q9FKC0 SMR:Q9FKC0 STRING:Q9FKC0 PRIDE:Q9FKC0
EnsemblPlants:AT5G48760.1 EnsemblPlants:AT5G48760.2 GeneID:834934
KEGG:ath:AT5G48760 GeneFarm:214 TAIR:At5g48760 InParanoid:Q9FKC0
OMA:EFGPYFP PhylomeDB:Q9FKC0 Genevestigator:Q9FKC0
GermOnline:AT5G48760 Uniprot:Q9FKC0
Length = 206
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 136/159 (85%), Positives = 143/159 (89%)
Query: 1 MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYM 60
MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVV VRCEEIC+SGGLVRQKMKYM
Sbjct: 1 MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60
Query: 61 RFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKV 120
RFLRKRMNTKPSHGPIHFRAP+KIFWRTVRGMIPHKT YEGVP PYDK+
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120
Query: 121 KRMVIPDALKVLRLQKGHKYCLLGRLASEVGWNYYDTIR 159
KRMVIPDALKVLRLQ GHKYCLLGRL+SEVGWN+YDTI+
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK 159
>TAIR|locus:2098530 [details] [associations]
symbol:AT3G07110 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015934 "large ribosomal subunit" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0001510 "RNA methylation" evidence=RCA] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0009506
GO:GO:0009507 EMBL:CP002686 GO:GO:0005730 GO:GO:0016020
GO:GO:0006412 GO:GO:0003735 GO:GO:0022625 KO:K02872
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 UniGene:At.20766 OMA:HYDTIKQ
IPI:IPI00656921 RefSeq:NP_001030654.1 ProteinModelPortal:F4JD96
SMR:F4JD96 PRIDE:F4JD96 EnsemblPlants:AT3G07110.2 GeneID:819897
KEGG:ath:AT3G07110 Uniprot:F4JD96
Length = 207
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 132/159 (83%), Positives = 143/159 (89%)
Query: 1 MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYM 60
MVSGSGICAKRVVVDARHHMLGRLAS+VAK+LLNGQ +V VRCEEIC+SGGLVRQKMKYM
Sbjct: 1 MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60
Query: 61 RFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKV 120
RFLRKRMNTKPSHGPIHFRAP+KIFWRTVRGMIPHKT +EGVP PYDK+
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120
Query: 121 KRMVIPDALKVLRLQKGHKYCLLGRLASEVGWNYYDTIR 159
KRMV+PDALKVLRLQ GHKYCLLGRL+SEVGWN+YDTI+
Sbjct: 121 KRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK 159
>TAIR|locus:2087268 [details] [associations]
symbol:AT3G24830 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015934 "large ribosomal subunit" evidence=IEA;ISS] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR005755 InterPro:IPR005822
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006412 GO:GO:0003735
EMBL:AB028609 eggNOG:COG0102 GO:GO:0022625 EMBL:AY080870
EMBL:AY150392 IPI:IPI00547010 RefSeq:NP_189127.1 UniGene:At.23983
UniGene:At.2870 UniGene:At.43372 ProteinModelPortal:Q9LRX8
SMR:Q9LRX8 IntAct:Q9LRX8 STRING:Q9LRX8 PaxDb:Q9LRX8 PRIDE:Q9LRX8
EnsemblPlants:AT3G24830.1 GeneID:822081 KEGG:ath:AT3G24830
GeneFarm:158 TAIR:At3g24830 HOGENOM:HOG000225289 InParanoid:Q9LRX8
KO:K02872 OMA:RSAEYYA PhylomeDB:Q9LRX8 ProtClustDB:CLSN2684535
Genevestigator:Q9LRX8 GermOnline:AT3G24830 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 Uniprot:Q9LRX8
Length = 206
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 134/159 (84%), Positives = 142/159 (89%)
Query: 1 MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYM 60
MVSGSGIC+KRVVVDARHHM GRLASI+AKELLNGQ VV VRCEEIC+SGGLVRQKMKYM
Sbjct: 1 MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60
Query: 61 RFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKV 120
RFLRKRMNTKPSHGPIHFRAP+KIFWRTVRGMIPHKT +EGVP PYDKV
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKV 120
Query: 121 KRMVIPDALKVLRLQKGHKYCLLGRLASEVGWNYYDTIR 159
KRMVIPDALKVLRLQ GHKYCLLGRL+SEVGWN+YDTI+
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK 159
>TAIR|locus:2119335 [details] [associations]
symbol:AT4G13170 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0016020
"membrane" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] InterPro:IPR005755 InterPro:IPR005822
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
PIRSF:PIRSF002181 PROSITE:PS00783 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 GO:GO:0006412 GO:GO:0003735
EMBL:AL049751 EMBL:AL161535 eggNOG:COG0102 GO:GO:0022625
HOGENOM:HOG000225289 KO:K02872 ProtClustDB:CLSN2684535
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 EMBL:AY052263 EMBL:AY060518
IPI:IPI00537926 PIR:T07697 RefSeq:NP_193053.1 UniGene:At.3259
ProteinModelPortal:Q9SVR0 SMR:Q9SVR0 STRING:Q9SVR0 PaxDb:Q9SVR0
PRIDE:Q9SVR0 EnsemblPlants:AT4G13170.1 GeneID:826931
KEGG:ath:AT4G13170 GeneFarm:217 TAIR:At4g13170 InParanoid:Q9SVR0
OMA:FYRNKIK PhylomeDB:Q9SVR0 Genevestigator:Q9SVR0
GermOnline:AT4G13170 Uniprot:Q9SVR0
Length = 206
Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
Identities = 132/159 (83%), Positives = 141/159 (88%)
Query: 1 MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYM 60
MVSGSGICAKRVVVD RHHMLGRLAS AKELLNGQ+VV VRCEEIC+SGGLVRQKMKYM
Sbjct: 1 MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYM 60
Query: 61 RFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKV 120
RFLRKRMNTKPSHGPIHFRAP+KIFWRTVRGMIPHKT +EG+P PYDK+
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKI 120
Query: 121 KRMVIPDALKVLRLQKGHKYCLLGRLASEVGWNYYDTIR 159
KRMVIPDALKVLRLQ GHKYCLLGRL+SEVGWN+YDTI+
Sbjct: 121 KRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIK 159
>UNIPROTKB|Q3SZ90 [details] [associations]
symbol:RPL13A "60S ribosomal protein L13a" species:9913
"Bos taurus" [GO:1901194 "negative regulation of formation of
translation preinitiation complex" evidence=ISS] [GO:0017148
"negative regulation of translation" evidence=ISS] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR005755 InterPro:IPR005822
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783
GO:GO:0017148 GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
eggNOG:COG0102 HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 OMA:FYRNKIK HOVERGEN:HBG062176 EMBL:BC103039
IPI:IPI00712384 RefSeq:NP_001070466.1 UniGene:Bt.49211
ProteinModelPortal:Q3SZ90 SMR:Q3SZ90 STRING:Q3SZ90 PRIDE:Q3SZ90
Ensembl:ENSBTAT00000005007 GeneID:767925 KEGG:bta:767925 CTD:23521
GeneTree:ENSGT00390000010799 InParanoid:Q3SZ90 OrthoDB:EOG479F83
NextBio:20918282 GO:GO:1901194 Uniprot:Q3SZ90
Length = 203
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 87/143 (60%), Positives = 107/143 (74%)
Query: 12 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKP 71
+V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG R K+KY+ FLRKRMNT P
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 66
Query: 72 SHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKV 131
S GP HFRAP++IFWRTVRGM+PHKT ++G+P PYDK KRMV+P ALKV
Sbjct: 67 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVFDGIPPPYDKKKRMVVPAALKV 126
Query: 132 LRLQKGHKYCLLGRLASEVGWNY 154
+RL+ K+ LGRLA EVGW Y
Sbjct: 127 VRLKPTRKFAYLGRLAHEVGWKY 149
>UNIPROTKB|F1PI16 [details] [associations]
symbol:RPL13A "60S ribosomal protein L13a" species:9615
"Canis lupus familiaris" [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783 GO:GO:0006412
GO:GO:0003735 GO:GO:0022625 KO:K02872 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 OMA:FYRNKIK CTD:23521
GeneTree:ENSGT00390000010799 UniGene:Cfa.40191 EMBL:AAEX03000800
RefSeq:XP_003432774.1 Ensembl:ENSCAFT00000005848 GeneID:403680
KEGG:cfa:403680 NextBio:20817184 Uniprot:F1PI16
Length = 203
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 87/143 (60%), Positives = 107/143 (74%)
Query: 12 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKP 71
+V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG R K+KY+ FLRKRMNT P
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 66
Query: 72 SHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKV 131
S GP HFRAP++IFWRTVRGM+PHKT ++G+P PYDK KRMV+P ALKV
Sbjct: 67 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 126
Query: 132 LRLQKGHKYCLLGRLASEVGWNY 154
+RL+ K+ LGRLA EVGW Y
Sbjct: 127 VRLKPTRKFAYLGRLAHEVGWKY 149
>UNIPROTKB|P40429 [details] [associations]
symbol:RPL13A "60S ribosomal protein L13a" species:9606
"Homo sapiens" [GO:0006412 "translation" evidence=NAS;TAS]
[GO:0003735 "structural constituent of ribosome" evidence=NAS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0017148 "negative regulation of translation" evidence=IMP;IDA]
[GO:1901194 "negative regulation of formation of translation
preinitiation complex" evidence=IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0071346 "cellular response to
interferon-gamma" evidence=IDA] [GO:0015934 "large ribosomal
subunit" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783
Reactome:REACT_116125 GO:GO:0000184 GO:GO:0017148 GO:GO:0006413
GO:GO:0003735 EMBL:CH471177 GO:GO:0071346 GO:GO:0006415
GO:GO:0006414 Reactome:REACT_1762 eggNOG:COG0102 GO:GO:0006614
GO:GO:0022625 GO:GO:0019083 HOGENOM:HOG000225289 KO:K02872
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 OMA:FYRNKIK HOVERGEN:HBG062176
CTD:23521 OrthoDB:EOG479F83 GO:GO:1901194 ChiTaRS:RPL13A
EMBL:X56932 EMBL:AB028893 EMBL:AK291120 EMBL:BC000514 EMBL:BC001675
EMBL:BC001836 EMBL:BC062537 EMBL:BC065236 EMBL:BC070223
EMBL:BC071929 IPI:IPI00304612 PIR:S29539 RefSeq:NP_001257420.1
RefSeq:NP_036555.1 UniGene:Hs.523185 ProteinModelPortal:P40429
SMR:P40429 IntAct:P40429 MINT:MINT-1417412 STRING:P40429
PhosphoSite:P40429 DMDM:730451 PaxDb:P40429 PRIDE:P40429
DNASU:23521 Ensembl:ENST00000391857 GeneID:23521 KEGG:hsa:23521
UCSC:uc002pny.3 GeneCards:GC19P049991 H-InvDB:HIX0027968
H-InvDB:HIX0158081 HGNC:HGNC:10304 HPA:HPA038751 neXtProt:NX_P40429
PharmGKB:PA38122 InParanoid:P40429 PhylomeDB:P40429
GenomeRNAi:23521 NextBio:45973 ArrayExpress:P40429 Bgee:P40429
CleanEx:HS_RPL13A Genevestigator:P40429 GermOnline:ENSG00000142541
Uniprot:P40429
Length = 203
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 87/143 (60%), Positives = 107/143 (74%)
Query: 12 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKP 71
+V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG R K+KY+ FLRKRMNT P
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 66
Query: 72 SHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKV 131
S GP HFRAP++IFWRTVRGM+PHKT ++G+P PYDK KRMV+P ALKV
Sbjct: 67 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 126
Query: 132 LRLQKGHKYCLLGRLASEVGWNY 154
+RL+ K+ LGRLA EVGW Y
Sbjct: 127 VRLKPTRKFAYLGRLAHEVGWKY 149
>UNIPROTKB|F1RI01 [details] [associations]
symbol:RPL13A "60S ribosomal protein L13a" species:9823
"Sus scrofa" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PROSITE:PS00783 GO:GO:0006412 GO:GO:0003735
GO:GO:0015934 KO:K02872 Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
OMA:FYRNKIK CTD:23521 GeneTree:ENSGT00390000010799 EMBL:FP102665
RefSeq:NP_001230997.1 UniGene:Ssc.17024 UniGene:Ssc.27927
Ensembl:ENSSSCT00000003516 GeneID:780432 KEGG:ssc:780432
ArrayExpress:F1RI01 Uniprot:F1RI01
Length = 204
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 87/143 (60%), Positives = 107/143 (74%)
Query: 12 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKP 71
+V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG R K+KY+ FLRKRMNT P
Sbjct: 8 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 67
Query: 72 SHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKV 131
S GP HFRAP++IFWRTVRGM+PHKT ++G+P PYDK KRMV+P ALKV
Sbjct: 68 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 127
Query: 132 LRLQKGHKYCLLGRLASEVGWNY 154
+RL+ K+ LGRLA EVGW Y
Sbjct: 128 VRLKPTRKFAYLGRLAHEVGWKY 150
>UNIPROTKB|Q4R8Z2 [details] [associations]
symbol:RPL13A "60S ribosomal protein L13a" species:9541
"Macaca fascicularis" [GO:0017148 "negative regulation of
translation" evidence=ISS] [GO:1901194 "negative regulation of
formation of translation preinitiation complex" evidence=ISS]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783 GO:GO:0017148
GO:GO:0006412 GO:GO:0003735 GO:GO:0015934 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 HOVERGEN:HBG062176 GO:GO:1901194 EMBL:AB168305
ProteinModelPortal:Q4R8Z2 SMR:Q4R8Z2 PRIDE:Q4R8Z2 Uniprot:Q4R8Z2
Length = 203
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 87/143 (60%), Positives = 107/143 (74%)
Query: 12 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKP 71
+V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG R K+KY+ FLRKRMNT P
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 66
Query: 72 SHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKV 131
S GP HFRAP++IFWRTVRGM+PHKT ++G+P PYDK KRMV+P ALKV
Sbjct: 67 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 126
Query: 132 LRLQKGHKYCLLGRLASEVGWNY 154
+RL+ K+ LGRLA EVGW Y
Sbjct: 127 VRLKPTRKFAYLGRLAHEVGWKY 149
>UNIPROTKB|Q5RA38 [details] [associations]
symbol:RPL13A "60S ribosomal protein L13a" species:9601
"Pongo abelii" [GO:0017148 "negative regulation of translation"
evidence=ISS] [GO:1901194 "negative regulation of formation of
translation preinitiation complex" evidence=ISS] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PROSITE:PS00783 GO:GO:0017148 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
HOVERGEN:HBG062176 CTD:23521 GO:GO:1901194 EMBL:CR859183
RefSeq:NP_001125810.1 UniGene:Pab.7590 ProteinModelPortal:Q5RA38
SMR:Q5RA38 GeneID:100172738 KEGG:pon:100172738 InParanoid:Q5RA38
Uniprot:Q5RA38
Length = 203
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 87/143 (60%), Positives = 107/143 (74%)
Query: 12 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKP 71
+V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG R K+KY+ FLRKRMNT P
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTSP 66
Query: 72 SHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKV 131
S GP HFRAP++IFWRTVRGM+PHKT ++G+P PYDK KRMV+P ALKV
Sbjct: 67 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 126
Query: 132 LRLQKGHKYCLLGRLASEVGWNY 154
+RL+ K+ LGRLA EVGW Y
Sbjct: 127 VRLKPTRKFAYLGRLAHEVGWKY 149
>RGD|628697 [details] [associations]
symbol:Rpl13a "ribosomal protein L13A" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA;NAS] [GO:0005840 "ribosome" evidence=NAS] [GO:0006412
"translation" evidence=IEA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO;ISS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0071346 "cellular response to interferon-gamma" evidence=ISO]
[GO:1901194 "negative regulation of formation of translation
preinitiation complex" evidence=ISO;ISS] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PROSITE:PS00783 RGD:628697 GO:GO:0017148 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 eggNOG:COG0102 GO:GO:0022625
HOGENOM:HOG000225289 Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
HOVERGEN:HBG062176 OrthoDB:EOG479F83 GO:GO:1901194 EMBL:X68282
IPI:IPI00655314 PIR:A53204 UniGene:Rn.92211
ProteinModelPortal:P35427 SMR:P35427 IntAct:P35427 STRING:P35427
PhosphoSite:P35427 PRIDE:P35427 UCSC:RGD:628697 InParanoid:P35427
ArrayExpress:P35427 Genevestigator:P35427
GermOnline:ENSRNOG00000020618 Uniprot:P35427
Length = 203
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 87/143 (60%), Positives = 106/143 (74%)
Query: 12 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKP 71
+V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG R K+KY+ FLRKRMNT P
Sbjct: 7 LVLDGRSHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 66
Query: 72 SHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKV 131
S GP HFRAP++IFWRTVRGM+PHKT +G+P PYDK KRMV+P ALKV
Sbjct: 67 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKV 126
Query: 132 LRLQKGHKYCLLGRLASEVGWNY 154
+RL+ K+ LGRLA EVGW Y
Sbjct: 127 VRLKPTRKFAYLGRLAHEVGWKY 149
>MGI|MGI:1351455 [details] [associations]
symbol:Rpl13a "ribosomal protein L13A" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0017148 "negative
regulation of translation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0071346 "cellular
response to interferon-gamma" evidence=ISO] [GO:1901194 "negative
regulation of formation of translation preinitiation complex"
evidence=ISO] InterPro:IPR005755 InterPro:IPR005822
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783
MGI:MGI:1351455 GO:GO:0017148 GO:GO:0006412 GO:GO:0003735
GO:GO:0030529 GO:GO:0071346 GO:GO:0015934 eggNOG:COG0102
HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 HOVERGEN:HBG062176 CTD:23521 EMBL:X51528
EMBL:BC082289 IPI:IPI00223217 PIR:JL0149 RefSeq:NP_033464.2
UniGene:Mm.180458 ProteinModelPortal:P19253 SMR:P19253
IntAct:P19253 STRING:P19253 PhosphoSite:P19253 PaxDb:P19253
PRIDE:P19253 Ensembl:ENSMUST00000150350 GeneID:22121 KEGG:mmu:22121
InParanoid:P19253 NextBio:301981 Bgee:P19253 CleanEx:MM_RPL13A
Genevestigator:P19253 GermOnline:ENSMUSG00000003426 Uniprot:P19253
Length = 203
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 87/143 (60%), Positives = 106/143 (74%)
Query: 12 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKP 71
+V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG R K+KY+ FLRKRMNT P
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 66
Query: 72 SHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKV 131
S GP HFRAP++IFWRTVRGM+PHKT +G+P PYDK KRMV+P ALKV
Sbjct: 67 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKV 126
Query: 132 LRLQKGHKYCLLGRLASEVGWNY 154
+RL+ K+ LGRLA EVGW Y
Sbjct: 127 VRLKPTRKFAYLGRLAHEVGWKY 149
>UNIPROTKB|Q5RK10 [details] [associations]
symbol:Rpl13a "Neuroprotective protein 11" species:10116
"Rattus norvegicus" [GO:0006412 "translation" evidence=IEA]
[GO:0015934 "large ribosomal subunit" evidence=IEA]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783 RGD:628697
GO:GO:0006412 GO:GO:0003735 EMBL:CH473979 GO:GO:0022625 KO:K02872
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 HOVERGEN:HBG062176 CTD:23521
GeneTree:ENSGT00390000010799 UniGene:Rn.92211 EMBL:BC086382
EMBL:EU000472 IPI:IPI00780235 RefSeq:NP_775462.2 SMR:Q5RK10
STRING:Q5RK10 Ensembl:ENSRNOT00000027976 GeneID:317646
KEGG:rno:317646 InParanoid:Q5RK10 NextBio:672053
Genevestigator:Q5RK10 Uniprot:Q5RK10
Length = 203
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 87/143 (60%), Positives = 106/143 (74%)
Query: 12 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKP 71
+V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG R K+KY+ FLRKRMNT P
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 66
Query: 72 SHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKV 131
S GP HFRAP++IFWRTVRGM+PHKT +G+P PYDK KRMV+P ALKV
Sbjct: 67 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKV 126
Query: 132 LRLQKGHKYCLLGRLASEVGWNY 154
+RL+ K+ LGRLA EVGW Y
Sbjct: 127 VRLKPTRKFAYLGRLAHEVGWKY 149
>ZFIN|ZDB-GENE-030131-168 [details] [associations]
symbol:rpl13a "ribosomal protein L13a" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783
ZFIN:ZDB-GENE-030131-168 GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
KO:K02872 Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
HOVERGEN:HBG062176 HSSP:O59300 CTD:23521 EMBL:BC047855
IPI:IPI00632292 RefSeq:NP_997949.1 UniGene:Dr.32450
ProteinModelPortal:Q7ZUR9 SMR:Q7ZUR9 STRING:Q7ZUR9 PRIDE:Q7ZUR9
GeneID:560828 KEGG:dre:560828 InParanoid:Q7ZUR9 NextBio:20883635
ArrayExpress:Q7ZUR9 Bgee:Q7ZUR9 Uniprot:Q7ZUR9
Length = 205
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 84/145 (57%), Positives = 107/145 (73%)
Query: 10 KRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNT 69
K +++D R H+LGRL++IVAK++L G K+V VRCE I +SG R K+KY+ FLRKRMNT
Sbjct: 7 KVLIIDGRGHLLGRLSAIVAKQVLLGHKIVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 66
Query: 70 KPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDAL 129
PS G HFRAP++IFWRTVRGM+PHKT ++G+P PYDK KRMV+P AL
Sbjct: 67 NPSRGSYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKRKRMVVPAAL 126
Query: 130 KVLRLQKGHKYCLLGRLASEVGWNY 154
K++RL+ K+ LLGRLA EVGW Y
Sbjct: 127 KIVRLKPTRKFALLGRLAHEVGWKY 151
>UNIPROTKB|Q9XSU0 [details] [associations]
symbol:RPL13A "60S ribosomal protein L13a" species:9615
"Canis lupus familiaris" [GO:1901194 "negative regulation of
formation of translation preinitiation complex" evidence=ISS]
[GO:0017148 "negative regulation of translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR005755 InterPro:IPR005822
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783
GO:GO:0017148 GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
eggNOG:COG0102 HOGENOM:HOG000225289 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 HOVERGEN:HBG062176 PDB:2ZKR PDBsum:2ZKR
GO:GO:1901194 EMBL:DN325227 EMBL:AJ388525 EMBL:CO660712
UniGene:Cfa.40191 STRING:Q9XSU0 PRIDE:Q9XSU0
EvolutionaryTrace:Q9XSU0 Uniprot:Q9XSU0
Length = 203
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 85/143 (59%), Positives = 105/143 (73%)
Query: 12 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKP 71
+V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG R K+ Y+ FLRKRMNT P
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLNYLAFLRKRMNTNP 66
Query: 72 SHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKV 131
S GP FRAP++IFWRTVRGM+PHKT ++G+P PYDK KRMV+P ALKV
Sbjct: 67 SRGPYDFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 126
Query: 132 LRLQKGHKYCLLGRLASEVGWNY 154
+RL+ K+ LGRLA EVGW Y
Sbjct: 127 VRLKPTRKFAYLGRLAHEVGWKY 149
>POMBASE|SPAC23A1.11 [details] [associations]
symbol:rpl1602 "60S ribosomal protein L13/L16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002181
"cytoplasmic translation" evidence=NAS] [GO:0003735 "structural
constituent of ribosome" evidence=ISO] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR005755 InterPro:IPR005822
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
PIRSF:PIRSF002181 PROSITE:PS00783 PomBase:SPAC23A1.11 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0002181
GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 OMA:FYRNKIK PIR:T38231 RefSeq:NP_594441.1
ProteinModelPortal:O42848 SMR:O42848 STRING:O42848 PRIDE:O42848
EnsemblFungi:SPAC23A1.11.1 GeneID:2542006 KEGG:spo:SPAC23A1.11
OrthoDB:EOG4C2MKV NextBio:20803086 Uniprot:O42848
Length = 197
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 84/149 (56%), Positives = 107/149 (71%)
Query: 10 KRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNT 69
K VV+DA+ H+LGRLAS+VAK+LL GQKVV VRCEE+ +SG R K+KY+ +LRK
Sbjct: 6 KVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRY 65
Query: 70 KPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDAL 129
PS G HFRAP++IF + VRGM+PHKT EG+P P+DK KR+V+P AL
Sbjct: 66 NPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAAL 125
Query: 130 KVLRLQKGHKYCLLGRLASEVGWNYYDTI 158
+VLRL+ G KYC +GRL+SEVGW Y D +
Sbjct: 126 RVLRLKPGRKYCTVGRLSSEVGWKYSDIV 154
>POMBASE|SPBC839.13c [details] [associations]
symbol:rpl1601 "60S ribosomal protein L13/L16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002181
"cytoplasmic translation" evidence=NAS] [GO:0003735 "structural
constituent of ribosome" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006412 "translation" evidence=ISO] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
PomBase:SPBC839.13c EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0003735 GO:GO:0002181 eggNOG:COG0102 GO:GO:0022625
HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 OMA:HYDTIKQ OrthoDB:EOG4C2MKV EMBL:AB016008
PIR:T40720 PIR:T43381 RefSeq:NP_595253.1 ProteinModelPortal:O42991
SMR:O42991 STRING:O42991 EnsemblFungi:SPBC839.13c.1 GeneID:2541175
KEGG:spo:SPBC839.13c NextBio:20802287 Uniprot:O42991
Length = 197
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 84/149 (56%), Positives = 107/149 (71%)
Query: 10 KRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNT 69
K VV+DA+ H+LGRLAS+VAK+LL GQKVV VRCEE+ +SG R K+KY+ +LRK
Sbjct: 6 KVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRY 65
Query: 70 KPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDAL 129
PS G HFRAP++IF + VRGM+PHKT EG+P P+DK KR+V+P AL
Sbjct: 66 NPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAAL 125
Query: 130 KVLRLQKGHKYCLLGRLASEVGWNYYDTI 158
+VLRL+ G KYC +GRL+SEVGW Y D +
Sbjct: 126 RVLRLKPGRKYCTVGRLSSEVGWKYNDIV 154
>FB|FBgn0037351 [details] [associations]
symbol:RpL13A "Ribosomal protein L13A" species:7227
"Drosophila melanogaster" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0003735 "structural constituent of ribosome" evidence=ISS;IDA]
[GO:0007219 "Notch signaling pathway" evidence=IGI] [GO:0008407
"chaeta morphogenesis" evidence=IMP] [GO:0005840 "ribosome"
evidence=IDA] [GO:0051298 "centrosome duplication" evidence=IMP]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
EMBL:AE014297 GO:GO:0051298 GO:GO:0006412 GO:GO:0007219
GO:GO:0005840 GO:GO:0003735 GO:GO:0008407 GO:GO:0015934
eggNOG:COG0102 KO:K02872 Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
OMA:FYRNKIK CTD:23521 GeneTree:ENSGT00390000010799 EMBL:AY051640
RefSeq:NP_649560.1 UniGene:Dm.4531 ProteinModelPortal:Q9VNE9
SMR:Q9VNE9 DIP:DIP-19002N IntAct:Q9VNE9 MINT:MINT-790225
STRING:Q9VNE9 PaxDb:Q9VNE9 PRIDE:Q9VNE9 EnsemblMetazoa:FBtr0078705
GeneID:40687 KEGG:dme:Dmel_CG1475 FlyBase:FBgn0037351
InParanoid:Q9VNE9 OrthoDB:EOG451C6S PhylomeDB:Q9VNE9 ChiTaRS:RPL13A
GenomeRNAi:40687 NextBio:820056 GermOnline:CG1475 Uniprot:Q9VNE9
Length = 205
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 80/155 (51%), Positives = 111/155 (71%)
Query: 5 SGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLR 64
+G+ + VV+D R H+LGRLAS+VAK LL G KV VRCEE+ +SG R K+K++ +LR
Sbjct: 2 TGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLR 61
Query: 65 KRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMV 124
KR N P+ GP HFRAP++IF++ VRGMIPHKT ++G+P+PYDK +R+V
Sbjct: 62 KRCNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVV 121
Query: 125 IPDALKVLRLQKGHKYCLLGRLASEVGWNYYDTIR 159
+P A++VL L+ KYC +GRL+ EVGW+Y D I+
Sbjct: 122 VPIAMRVLTLRSDRKYCQVGRLSHEVGWHYQDVIK 156
>GENEDB_PFALCIPARUM|PF10_0043 [details] [associations]
symbol:PF10_0043 "ribosomal protein L13,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 GO:GO:0006412 GO:GO:0003735
EMBL:AE014185 GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 HSSP:O59300 ProtClustDB:PTZ00068
RefSeq:XP_001347328.1 ProteinModelPortal:Q8IJZ7 SMR:Q8IJZ7
IntAct:Q8IJZ7 MINT:MINT-1665265 PRIDE:Q8IJZ7
EnsemblProtists:PF10_0043:mRNA GeneID:810201 KEGG:pfa:PF10_0043
EuPathDB:PlasmoDB:PF3D7_1004000 OMA:VAVRCED Uniprot:Q8IJZ7
Length = 202
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 83/149 (55%), Positives = 104/149 (69%)
Query: 10 KRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNT 69
K V+D + H+LGRLAS++AKELLNGQ++VAVRCE+I +SG L R K+KY FLR R NT
Sbjct: 4 KEYVIDCKGHLLGRLASLIAKELLNGQRIVAVRCEDINISGSLYRNKLKYQEFLRLRTNT 63
Query: 70 KPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDAL 129
P GP+H R P+KI WR VRGM+PHKT G+P PYDK K+ V+P AL
Sbjct: 64 NPKKGPLHLREPSKILWRCVRGMLPHKTYKGQLALKKLKVCVGMPYPYDKKKKYVLPSAL 123
Query: 130 KVLRLQKGHKYCLLGRLASEVGWNYYDTI 158
+ RL+K +YC LG L+S VGWNY DT+
Sbjct: 124 RAFRLKKHRRYCRLGTLSSRVGWNY-DTL 151
>UNIPROTKB|Q8IJZ7 [details] [associations]
symbol:PF10_0043 "60S ribosomal protein L13, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023564 Pfam:PF00572
PIRSF:PIRSF002181 GO:GO:0006412 GO:GO:0003735 EMBL:AE014185
GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 HSSP:O59300 ProtClustDB:PTZ00068
RefSeq:XP_001347328.1 ProteinModelPortal:Q8IJZ7 SMR:Q8IJZ7
IntAct:Q8IJZ7 MINT:MINT-1665265 PRIDE:Q8IJZ7
EnsemblProtists:PF10_0043:mRNA GeneID:810201 KEGG:pfa:PF10_0043
EuPathDB:PlasmoDB:PF3D7_1004000 OMA:VAVRCED Uniprot:Q8IJZ7
Length = 202
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 83/149 (55%), Positives = 104/149 (69%)
Query: 10 KRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNT 69
K V+D + H+LGRLAS++AKELLNGQ++VAVRCE+I +SG L R K+KY FLR R NT
Sbjct: 4 KEYVIDCKGHLLGRLASLIAKELLNGQRIVAVRCEDINISGSLYRNKLKYQEFLRLRTNT 63
Query: 70 KPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDAL 129
P GP+H R P+KI WR VRGM+PHKT G+P PYDK K+ V+P AL
Sbjct: 64 NPKKGPLHLREPSKILWRCVRGMLPHKTYKGQLALKKLKVCVGMPYPYDKKKKYVLPSAL 123
Query: 130 KVLRLQKGHKYCLLGRLASEVGWNYYDTI 158
+ RL+K +YC LG L+S VGWNY DT+
Sbjct: 124 RAFRLKKHRRYCRLGTLSSRVGWNY-DTL 151
>ASPGD|ASPL0000014757 [details] [associations]
symbol:rpl16a species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=TAS]
[GO:0006412 "translation" evidence=TAS] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
GO:GO:0006412 EMBL:BN001302 GO:GO:0003735 EMBL:AACD01000068
GO:GO:0015934 HOGENOM:HOG000225289 KO:K02872 OMA:RSAEYYA
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 RefSeq:XP_661806.1
ProteinModelPortal:G5EB54 SMR:G5EB54 EnsemblFungi:CADANIAT00004462
GeneID:2873625 KEGG:ani:AN4202.2 Uniprot:G5EB54
Length = 202
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 83/148 (56%), Positives = 105/148 (70%)
Query: 12 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKP 71
VV+D + H+LGRLAS VAK+LLNGQK+V VRCE + +SG R K+KY +LRK P
Sbjct: 8 VVIDGKGHLLGRLASTVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHAYLRKITRYNP 67
Query: 72 SHG-PIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALK 130
+ G P HFRAP++IF++ VRGMIPHKT +EGVP PYDK KR+V+P AL+
Sbjct: 68 TRGGPFHFRAPSRIFYKAVRGMIPHKTARGAAALERLKVFEGVPPPYDKKKRVVVPQALR 127
Query: 131 VLRLQKGHKYCLLGRLASEVGWNYYDTI 158
VLRL+ G KYC +GRL+ EVGW Y D +
Sbjct: 128 VLRLRPGRKYCTVGRLSHEVGWKYQDVV 155
>UNIPROTKB|G4MLS0 [details] [associations]
symbol:MGG_05449 "60S ribosomal protein L16" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR005755 InterPro:IPR005822
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 GO:GO:0006412
GO:GO:0003735 EMBL:CM001231 GO:GO:0043581 GO:GO:0015934 KO:K02872
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 RefSeq:XP_003710310.1
ProteinModelPortal:G4MLS0 SMR:G4MLS0 EnsemblFungi:MGG_05449T0
GeneID:2675933 KEGG:mgr:MGG_05449 Uniprot:G4MLS0
Length = 202
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 82/148 (55%), Positives = 104/148 (70%)
Query: 12 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKP 71
VV+D + H+LGRLASIVAK+LL GQK+V VRCE + +SG R K+KY LRK P
Sbjct: 8 VVIDGKGHLLGRLASIVAKQLLEGQKIVVVRCEALNISGEFFRAKLKYHAHLRKITRYNP 67
Query: 72 SHG-PIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALK 130
+ G P HFRAP+++F++ VRGM+PHKT +EGVP PYDK K+MV+P AL+
Sbjct: 68 TRGGPFHFRAPSRVFYKAVRGMMPHKTARGTAALERLKVFEGVPPPYDKQKKMVVPQALR 127
Query: 131 VLRLQKGHKYCLLGRLASEVGWNYYDTI 158
VLRLQ G KYC +GRL+ EVGW Y D +
Sbjct: 128 VLRLQPGRKYCTVGRLSHEVGWKYQDVV 155
>POMBASE|SPBC2G2.05 [details] [associations]
symbol:rpl1603 "60S ribosomal protein L13/L16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002181
"cytoplasmic translation" evidence=NAS] [GO:0003735 "structural
constituent of ribosome" evidence=ISO] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR005755 InterPro:IPR005822
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
PIRSF:PIRSF002181 PROSITE:PS00783 PomBase:SPBC2G2.05 GO:GO:0005730
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181
eggNOG:COG0102 GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 OrthoDB:EOG4C2MKV PIR:T40144
RefSeq:NP_596434.1 ProteinModelPortal:O43004 SMR:O43004
STRING:O43004 EnsemblFungi:SPBC2G2.05.1 GeneID:2540373
KEGG:spo:SPBC2G2.05 OMA:GPKIPRR NextBio:20801501 Uniprot:O43004
Length = 197
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 80/149 (53%), Positives = 105/149 (70%)
Query: 10 KRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNT 69
K V++DA+ H++GRLAS VAK+LL GQKVV VRCEE+ +SG R K+KY+ +LRK
Sbjct: 6 KLVIIDAKGHLMGRLASTVAKQLLAGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRY 65
Query: 70 KPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDAL 129
PS G HFRAP++IF + VRGM+PHKT EG+P P+DK KR+V+P AL
Sbjct: 66 NPSRGAFHFRAPSRIFTKAVRGMLPHKTTRGNIALKNLQALEGIPPPFDKQKRLVVPAAL 125
Query: 130 KVLRLQKGHKYCLLGRLASEVGWNYYDTI 158
+VLRL+ KYC +GRL+SEVGW Y + +
Sbjct: 126 RVLRLKPSRKYCTIGRLSSEVGWKYKNIV 154
>WB|WBGene00004428 [details] [associations]
symbol:rpl-16 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 eggNOG:COG0102 EMBL:Z46381
HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 OMA:FYRNKIK GeneTree:ENSGT00390000010799
EMBL:U31528 PIR:T23654 RefSeq:NP_497721.1 UniGene:Cel.23339
ProteinModelPortal:Q27389 SMR:Q27389 DIP:DIP-25636N
MINT:MINT-1065156 STRING:Q27389 PaxDb:Q27389
EnsemblMetazoa:M01F1.2.1 EnsemblMetazoa:M01F1.2.2 GeneID:175455
KEGG:cel:CELE_M01F1.2 UCSC:M01F1.2.2 CTD:175455 WormBase:M01F1.2
InParanoid:Q27389 NextBio:888232 Uniprot:Q27389
Length = 202
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 80/153 (52%), Positives = 103/153 (67%)
Query: 6 GICAKRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRK 65
G+ + +++D ++H+LGRLASIVAK+LL G KVV +R EEI +SG R K+KYM FLRK
Sbjct: 2 GLSNRAIIIDGKNHLLGRLASIVAKKLLQGDKVVVLRAEEIVISGNFHRSKLKYMSFLRK 61
Query: 66 RMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVI 125
R N P+ G H+RAP KIFWRTVRGM+PHKT YEGVPA Y K K +
Sbjct: 62 RCNINPARGAFHYRAPGKIFWRTVRGMLPHKTNRGNEALKNLRAYEGVPAKYQKTKSLHA 121
Query: 126 PDALKVLRLQKGHKYCLLGRLASEVGWNYYDTI 158
P A + RLQ K+C++GRL+ EVGW + D +
Sbjct: 122 PSASR-FRLQPRRKFCVVGRLSHEVGWQFQDVV 153
>CGD|CAL0005216 [details] [associations]
symbol:RPL16A species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0071216 "cellular response to
biotic stimulus" evidence=IMP] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 CGD:CAL0005216
GO:GO:0071216 GO:GO:0036180 GO:GO:0016020 GO:GO:0006412
GO:GO:0003735 GO:GO:0009267 EMBL:AACQ01000036 EMBL:AACQ01000035
GO:GO:0036170 GO:GO:0032040 GO:GO:0015934 eggNOG:COG0102
HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 RefSeq:XP_718943.1 RefSeq:XP_719047.1
ProteinModelPortal:Q5AB87 SMR:Q5AB87 STRING:Q5AB87 GeneID:3639338
GeneID:3639461 KEGG:cal:CaO19.13504 KEGG:cal:CaO19.6085
Uniprot:Q5AB87
Length = 200
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 79/149 (53%), Positives = 103/149 (69%)
Query: 10 KRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNT 69
K VV+D + H+LGRLASIV+K++LNGQKVV VRCEE+ +SG R K+KY +LRK
Sbjct: 6 KVVVIDGKGHLLGRLASIVSKQILNGQKVVVVRCEELNISGEFFRNKLKYHDYLRKATRY 65
Query: 70 KPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDAL 129
GP HFRAP++I ++ +RGMIPHKT +EGVP PYDK KR+V+P AL
Sbjct: 66 NKKKGPFHFRAPSRILYKAIRGMIPHKTARGKAALERLKVFEGVPPPYDKKKRVVVPQAL 125
Query: 130 KVLRLQKGHKYCLLGRLASEVGWNYYDTI 158
+VLRL+ G KY +G+L+S VGW Y +
Sbjct: 126 RVLRLKPGRKYTTVGKLSSAVGWKYESVV 154
>DICTYBASE|DDB_G0275881 [details] [associations]
symbol:rpl13a "S60 ribosomal protein L13a"
species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
space" evidence=IDA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
dictyBase:DDB_G0275881 GO:GO:0005615 GO:GO:0006412
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0003735
GO:GO:0015934 eggNOG:COG0102 KO:K02872 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 HSSP:O59300 RefSeq:XP_643542.1
ProteinModelPortal:Q553M7 SMR:Q553M7 STRING:Q553M7 PRIDE:Q553M7
EnsemblProtists:DDB0231192 GeneID:8620124 KEGG:ddi:DDB_G0275881
OMA:HYDTIKQ ProtClustDB:PTZ00068 Uniprot:Q553M7
Length = 187
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 80/145 (55%), Positives = 103/145 (71%)
Query: 10 KRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNT 69
K +V+D + H+LGRLAS+VAK LL+GQK+V VRCEE+ +SG L R K+K+ FL MNT
Sbjct: 5 KAIVIDGKGHLLGRLASVVAKSLLSGQKIVVVRCEELNISGPLSRNKLKWADFLNLTMNT 64
Query: 70 KPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDAL 129
+ G H R+P+KIFWR VRGM+PHKT +EGVPAPYDKVKR+V+P AL
Sbjct: 65 NHARGHRHGRSPSKIFWRAVRGMLPHKTPRGQAALDNMKVFEGVPAPYDKVKRVVVPSAL 124
Query: 130 KVLRLQKGHKYCLLGRLASEVGWNY 154
+V++L KY +L RL+ EVGW Y
Sbjct: 125 RVVKLNTTRKYTVLSRLSQEVGWKY 149
>UNIPROTKB|Q95307 [details] [associations]
symbol:RPL13A "60S ribosomal protein L13a" species:9823
"Sus scrofa" [GO:1901194 "negative regulation of formation of
translation preinitiation complex" evidence=ISS] [GO:0017148
"negative regulation of translation" evidence=ISS] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR005755 InterPro:IPR005822
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0017148 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 eggNOG:COG0102 HOGENOM:HOG000225289
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 HOVERGEN:HBG062176
OrthoDB:EOG479F83 GO:GO:1901194 EMBL:Z81152 EMBL:Z84103
STRING:Q95307 PRIDE:Q95307 Uniprot:Q95307
Length = 137
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 81/135 (60%), Positives = 101/135 (74%)
Query: 12 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKP 71
+V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG R K+KY+ FLRKRMNT P
Sbjct: 3 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 62
Query: 72 SHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKV 131
S GP HFRAP++IFWRTVRGM+PHKT ++G+P PYDK KRMV+P ALKV
Sbjct: 63 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 122
Query: 132 LRLQKGHKYCLLGRL 146
+RL+ K+ LGRL
Sbjct: 123 VRLKLTGKFXYLGRL 137
>UNIPROTKB|Q5AB87 [details] [associations]
symbol:RPL16A "Likely cytosolic ribosomal protein L16"
species:237561 "Candida albicans SC5314" [GO:0009267 "cellular
response to starvation" evidence=IMP] [GO:0016020 "membrane"
evidence=IDA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0071216 "cellular response to
biotic stimulus" evidence=IMP] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 CGD:CAL0005216
GO:GO:0071216 GO:GO:0036180 GO:GO:0016020 GO:GO:0006412
GO:GO:0003735 GO:GO:0009267 EMBL:AACQ01000036 EMBL:AACQ01000035
GO:GO:0036170 GO:GO:0032040 GO:GO:0015934 eggNOG:COG0102
HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 RefSeq:XP_718943.1 RefSeq:XP_719047.1
ProteinModelPortal:Q5AB87 SMR:Q5AB87 STRING:Q5AB87 GeneID:3639338
GeneID:3639461 KEGG:cal:CaO19.13504 KEGG:cal:CaO19.6085
Uniprot:Q5AB87
Length = 200
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 79/149 (53%), Positives = 103/149 (69%)
Query: 10 KRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNT 69
K VV+D + H+LGRLASIV+K++LNGQKVV VRCEE+ +SG R K+KY +LRK
Sbjct: 6 KVVVIDGKGHLLGRLASIVSKQILNGQKVVVVRCEELNISGEFFRNKLKYHDYLRKATRY 65
Query: 70 KPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDAL 129
GP HFRAP++I ++ +RGMIPHKT +EGVP PYDK KR+V+P AL
Sbjct: 66 NKKKGPFHFRAPSRILYKAIRGMIPHKTARGKAALERLKVFEGVPPPYDKKKRVVVPQAL 125
Query: 130 KVLRLQKGHKYCLLGRLASEVGWNYYDTI 158
+VLRL+ G KY +G+L+S VGW Y +
Sbjct: 126 RVLRLKPGRKYTTVGKLSSAVGWKYESVV 154
>SGD|S000001395 [details] [associations]
symbol:RPL16A "Ribosomal 60S subunit protein L16A"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=TAS] [GO:0002181 "cytoplasmic translation" evidence=TAS]
[GO:0003723 "RNA binding" evidence=IDA] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 SGD:S000001395
EMBL:BK006942 GO:GO:0003723 GO:GO:0003735 GO:GO:0002181 EMBL:Z38059
PDB:4B6A PDBsum:4B6A GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 OMA:EFGPYFP PDB:1K5Y PDB:1S1I
PDB:3IZS PDB:3O58 PDB:3O5H PDB:3U5E PDB:3U5I PDBsum:1K5Y
PDBsum:1S1I PDBsum:3IZS PDBsum:3O58 PDBsum:3O5H PDBsum:3U5E
PDBsum:3U5I GeneTree:ENSGT00390000010799 OrthoDB:EOG4C2MKV
PIR:S48401 RefSeq:NP_012133.1 ProteinModelPortal:P26784 SMR:P26784
IntAct:P26784 MINT:MINT-2981627 STRING:P26784 PeptideAtlas:P26784
EnsemblFungi:YIL133C GeneID:854673 KEGG:sce:YIL133C
EvolutionaryTrace:P26784 NextBio:977265 ArrayExpress:P26784
Genevestigator:P26784 GermOnline:YIL133C Uniprot:P26784
Length = 199
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 76/147 (51%), Positives = 103/147 (70%)
Query: 12 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKP 71
VV+D + H++GRLAS+VAK+LLNGQK+V VR EE+ +SG R K+KY FLRK
Sbjct: 7 VVIDGKGHLVGRLASVVAKQLLNGQKIVVVRAEELNISGEFFRNKLKYHDFLRKATAFNK 66
Query: 72 SHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKV 131
+ GP HFRAP++IF++ +RGM+ HKT +EG+P PYDK KR+V+P AL+V
Sbjct: 67 TRGPFHFRAPSRIFYKALRGMVSHKTARGKAALERLKVFEGIPPPYDKKKRVVVPQALRV 126
Query: 132 LRLQKGHKYCLLGRLASEVGWNYYDTI 158
LRL+ G KY LG+L++ VGW Y D +
Sbjct: 127 LRLKPGRKYTTLGKLSTSVGWKYEDVV 153
>SGD|S000005013 [details] [associations]
symbol:RPL16B "Ribosomal 60S subunit protein L16B"
species:4932 "Saccharomyces cerevisiae" [GO:0005840 "ribosome"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0002181 "cytoplasmic translation" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=TAS] [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 SGD:S000005013
EMBL:BK006947 GO:GO:0003723 GO:GO:0003735 GO:GO:0002181 EMBL:X86470
eggNOG:COG0102 GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872
OMA:RSAEYYA Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
GeneTree:ENSGT00390000010799 OrthoDB:EOG4C2MKV EMBL:Z71345
PIR:S53911 RefSeq:NP_014330.1 ProteinModelPortal:P26785 SMR:P26785
IntAct:P26785 STRING:P26785 PaxDb:P26785 PeptideAtlas:P26785
EnsemblFungi:YNL069C GeneID:855655 KEGG:sce:YNL069C NextBio:979911
Genevestigator:P26785 GermOnline:YNL069C Uniprot:P26785
Length = 198
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 74/147 (50%), Positives = 101/147 (68%)
Query: 12 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKP 71
VV+DA+ H+LGRLAS +AK++LNGQK+V VR E + +SG R K+KY FLRK
Sbjct: 6 VVIDAKDHLLGRLASTIAKQVLNGQKIVVVRAEALNISGEFFRNKLKYHDFLRKATAFNK 65
Query: 72 SHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKV 131
+ GP HFRAP++I ++ +RGM+ HKT +EG+P PYDK KR+V+P AL+V
Sbjct: 66 TRGPFHFRAPSRILYKAIRGMVSHKTARGKAALERLKIFEGIPPPYDKKKRVVVPQALRV 125
Query: 132 LRLQKGHKYCLLGRLASEVGWNYYDTI 158
LRL+ G KY LG+L++ VGW Y D +
Sbjct: 126 LRLKPGRKYTTLGKLSTSVGWKYEDVV 152
>UNIPROTKB|I3LN23 [details] [associations]
symbol:I3LN23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023564 Pfam:PF00572 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
GeneTree:ENSGT00390000010799 Ensembl:ENSSSCT00000030341
Uniprot:I3LN23
Length = 207
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 73/146 (50%), Positives = 92/146 (63%)
Query: 12 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKP 71
+V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG R K+KY+ FLRKRMNT P
Sbjct: 8 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 67
Query: 72 SHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKV 131
S GP HFRAP++IFWRT +P + +P KRMV+P ALKV
Sbjct: 68 SRGPYHFRAPSRIFWRTSEAQLPQQQQPWLQRPPALAS---LPPCLSLKKRMVVPAALKV 124
Query: 132 LRLQK---GHKYCLLGRLASEVGWNY 154
+R ++ LGRLA EVGW Y
Sbjct: 125 VRFAPPFPSPQFAYLGRLAHEVGWKY 150
>UNIPROTKB|G3MXM1 [details] [associations]
symbol:G3MXM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023564 Pfam:PF00572 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
GeneTree:ENSGT00390000010799 EMBL:DAAA02019350
Ensembl:ENSBTAT00000064024 Uniprot:G3MXM1
Length = 193
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 70/142 (49%), Positives = 93/142 (65%)
Query: 12 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKP 71
+V+D + H+LGRL +IVAK++L G+K V VRCE I +SG R K+KY+ F RKRMNT P
Sbjct: 7 LVLDGQGHLLGRLEAIVAKQMLLGRKGVVVRCEGINISGNFYRNKLKYLAFFRKRMNTNP 66
Query: 72 SHGPIHFRAPAKIFWRTV-RGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALK 130
S P H RAP+ IFWRT + + H ++G+P Y+K KRMV+P ALK
Sbjct: 67 SRDPYHLRAPSGIFWRTGGQAALEH-----------LEVFDGIPPTYNKRKRMVVPAALK 115
Query: 131 VLRLQKGHKYCLLGRLASEVGW 152
V+RL+ K+ LGRLA E+GW
Sbjct: 116 VVRLKPTRKFAYLGRLAHEIGW 137
>UNIPROTKB|I3L8K3 [details] [associations]
symbol:I3L8K3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023564
Pfam:PF00572 GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 GeneTree:ENSGT00390000010799
Ensembl:ENSSSCT00000026257 OMA:RINTNGA Uniprot:I3L8K3
Length = 195
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 68/141 (48%), Positives = 86/141 (60%)
Query: 15 DARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHG 74
D R H LG L +I K++L GQKV+ VRCE I +SG + R K KY+ FL KR+NT +G
Sbjct: 11 DVRGHFLGCLVAIAPKQVLLGQKVMVVRCEGINISGNIYRNKPKYLAFLHKRINT---NG 67
Query: 75 PIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRL 134
A + IFWRTVR HKT ++ +P PYDK KRM+IP ALKV+RL
Sbjct: 68 -----ARSCIFWRTVRHPA-HKTRGGQATLDHLKVFDEIPPPYDKKKRMMIPAALKVVRL 121
Query: 135 QKGHKYCLLGRLASEVGWNYY 155
+ K+ LG LA EVGW Y+
Sbjct: 122 KPMRKFAYLGCLAYEVGWKYH 142
>UNIPROTKB|F1RU15 [details] [associations]
symbol:F1RU15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023564 Pfam:PF00572 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
GeneTree:ENSGT00390000010799 EMBL:CU856129
Ensembl:ENSSSCT00000014185 Uniprot:F1RU15
Length = 173
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 58/114 (50%), Positives = 74/114 (64%)
Query: 22 GRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP 81
GR VAK++L G KVV VRCE I +SG R K+KY+ F RK++NT PSH P FRAP
Sbjct: 1 GRCWGSVAKQVLLGWKVVVVRCEGINISGNFYRNKLKYVAFFRKQINTNPSHSPDPFRAP 60
Query: 82 AKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQ 135
+IFWR +RG++ HKT ++G P P DK KRMV+P ALKV+ L+
Sbjct: 61 -RIFWRPMRGLLLHKTKRSQAALDLKV-FDGKPPPNDKKKRMVVPGALKVVPLK 112
>UNIPROTKB|J9P546 [details] [associations]
symbol:J9P546 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023564
Pfam:PF00572 GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 GeneTree:ENSGT00390000010799 EMBL:AAEX03011787
Ensembl:ENSCAFT00000006345 Uniprot:J9P546
Length = 189
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 56/143 (39%), Positives = 81/143 (56%)
Query: 12 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKP 71
+V+ + H+LG L ++VAK++ GQKV+ V CE I +SG R K+ ++ FL K+ P
Sbjct: 9 LVLYGQGHLLGSLVAVVAKQVPLGQKVIVVCCEGINISGNFYRHKL-FLAFLHKQ----P 63
Query: 72 SHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKV 131
PI R P+ IFW TV GM+P+KT ++ + PY+ K+MV PDA KV
Sbjct: 64 M-APITSRMPSHIFWWTVEGMLPNKTKQGQTFLDCLR-FDRILPPYNMKKQMVAPDAFKV 121
Query: 132 LRLQKGHKYCLLGRLASEVGWNY 154
++ + K LG LA GW Y
Sbjct: 122 VQPKTTRKLTQLGYLA-HAGWKY 143
>UNIPROTKB|Q6NVV1 [details] [associations]
symbol:Q6NVV1 "Putative 60S ribosomal protein L13a-like
MGC87657" species:9606 "Homo sapiens" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015934 "large ribosomal subunit" evidence=IEA]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023564
PROSITE:PS00783 GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 EMBL:BC067891 IPI:IPI00432865
UniGene:Hs.663461 ProteinModelPortal:Q6NVV1 SMR:Q6NVV1
IntAct:Q6NVV1 STRING:Q6NVV1 PaxDb:Q6NVV1 PRIDE:Q6NVV1
neXtProt:NX_Q6NVV1 HOVERGEN:HBG062176 InParanoid:Q6NVV1
Genevestigator:Q6NVV1 Uniprot:Q6NVV1
Length = 102
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 31/63 (49%), Positives = 39/63 (61%)
Query: 92 MIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLASEVG 151
M+ HKT ++G+P PYDK KRMV+P ALKV+RL+ K+ LLGR A EV
Sbjct: 1 MLRHKTKRGHASLDCLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFALLGRQAQEVR 60
Query: 152 WNY 154
W Y
Sbjct: 61 WKY 63
>UNIPROTKB|E2QS54 [details] [associations]
symbol:E2QS54 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023564
GO:GO:0006412 GO:GO:0003735 GO:GO:0015934 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
Ensembl:ENSCAFT00000032205 Uniprot:E2QS54
Length = 99
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 92 MIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLASEVG 151
M+PHKT ++G+P PY+K K+MV+P ALKV+RL+ K+ LGRLA +VG
Sbjct: 1 MLPHKTKGQAALDRLKV-FDGIPPPYNK-KQMVVPAALKVVRLKPTRKFAYLGRLAHKVG 58
Query: 152 WNY 154
W Y
Sbjct: 59 WKY 61
>UNIPROTKB|F6UMX6 [details] [associations]
symbol:F6UMX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR005755 InterPro:IPR005822 GO:GO:0006412 GO:GO:0003735
GO:GO:0015934 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
GeneTree:ENSGT00390000010799 Ensembl:ENSCAFT00000032205
EMBL:AAEX03013124 OMA:MAEGQXD Uniprot:F6UMX6
Length = 86
Score = 96 (38.9 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 123 MVIPDALKVLRLQKGHKYCLLGRLASEVGWNY 154
MV+P ALKV+RL+ K+ LG LA EVGW Y
Sbjct: 1 MVVPAALKVVRLKPTRKFAYLGCLAHEVGWKY 32
>TAIR|locus:2203010 [details] [associations]
symbol:emb1473 "embryo defective 1473" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=ISS]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0045036
"protein targeting to chloroplast" evidence=RCA] InterPro:IPR005822
InterPro:IPR005823 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PROSITE:PS00783 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 GO:GO:0006412 GO:GO:0009941
GO:GO:0005840 GO:GO:0003735 GO:GO:0009579 EMBL:AC007260
eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
SUPFAM:SSF52161 EMBL:X87333 EMBL:AY063105 EMBL:AF370318
IPI:IPI00520181 PIR:A96815 RefSeq:NP_177984.1 UniGene:At.20962
HSSP:O59300 ProteinModelPortal:Q9SYL9 SMR:Q9SYL9 STRING:Q9SYL9
PaxDb:Q9SYL9 PRIDE:Q9SYL9 ProMEX:Q9SYL9 EnsemblPlants:AT1G78630.1
GeneID:844199 KEGG:ath:AT1G78630 GeneFarm:82 TAIR:At1g78630
HOGENOM:HOG000225286 InParanoid:Q9SYL9 KO:K02871 OMA:HVNTDKP
PhylomeDB:Q9SYL9 ProtClustDB:CLSN2679548 Genevestigator:Q9SYL9
GermOnline:AT1G78630 TIGRFAMs:TIGR01066 Uniprot:Q9SYL9
Length = 241
Score = 107 (42.7 bits), Expect = 0.00020, P = 0.00020
Identities = 43/137 (31%), Positives = 62/137 (45%)
Query: 13 VVDARHHMLGRLASIVA-----KELLN-------GQKVVAVRCEEICMSGGLVRQKMKYM 60
VVDA +LGRLAS +A K L + G V+ V E++ +SG QK+ Y
Sbjct: 107 VVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKL-YR 165
Query: 61 RFL-RKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDK 119
R R T + + R P +I VRGM+P K Y+G P++
Sbjct: 166 RHSGRPGGMTVETFDQLQQRIPERIVEHAVRGMLP-KGRLGRALFNHLKVYKGPDHPHEA 224
Query: 120 VKRMVIPDALKVLRLQK 136
K + +P K ++LQK
Sbjct: 225 QKPLDLPIRDKRIQLQK 241
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.328 0.141 0.449 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 179 167 0.00075 108 3 11 22 0.43 31
30 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 39
No. of states in DFA: 574 (61 KB)
Total size of DFA: 155 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.53u 0.12s 13.65t Elapsed: 00:00:01
Total cpu time: 13.53u 0.12s 13.65t Elapsed: 00:00:01
Start: Fri May 10 20:07:17 2013 End: Fri May 10 20:07:18 2013