BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030339
(179 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1HZD|A Chain A, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|B Chain B, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|C Chain C, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|D Chain D, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|E Chain E, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|F Chain F, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|2ZQQ|A Chain A, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|B Chain B, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|C Chain C, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|D Chain D, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|E Chain E, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|F Chain F, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQR|A Chain A, Crystal Structure Of Auh Without Rna
pdb|2ZQR|B Chain B, Crystal Structure Of Auh Without Rna
pdb|2ZQR|C Chain C, Crystal Structure Of Auh Without Rna
pdb|2ZQR|D Chain D, Crystal Structure Of Auh Without Rna
pdb|2ZQR|E Chain E, Crystal Structure Of Auh Without Rna
pdb|2ZQR|F Chain F, Crystal Structure Of Auh Without Rna
Length = 272
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 108/171 (63%), Gaps = 5/171 (2%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKV-LQMSPSEIHFYVNTLRSTFS 59
+++ L A + + D ++IRS VP +FCAGADLK +MS SE+ +V+ +R+ +
Sbjct: 40 LIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVIN 99
Query: 60 FLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPR 119
+ LP+PTIA ID CD+R+ +A +GL ET LAIIPG GGTQRLPR
Sbjct: 100 DIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPR 159
Query: 120 LVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQ----AQLKALEIAQE 166
+G S+AK++IF+ R + GK+A ++GL+++ + Q A KAL++A+E
Sbjct: 160 AIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLARE 210
>pdb|3KQF|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|B Chain B, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|C Chain C, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|D Chain D, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|E Chain E, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|F Chain F, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis
Length = 265
Score = 134 bits (338), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 99/157 (63%), Gaps = 1/157 (0%)
Query: 12 ISEDSSANVVMIRSSVPKVFCAGADLKVLQ-MSPSEIHFYVNTLRSTFSFLEALPIPTIA 70
I+E+++ VV++ + K FCAGADLK + ++ V+ +R+T +E LP P IA
Sbjct: 48 INEEANTRVVILTGAGEKAFCAGADLKERAGXNEEQVRHAVSXIRTTXEXVEQLPQPVIA 107
Query: 71 VIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDII 130
I+ CD RI E+A LGL ET LAIIPGAGGTQRLPRL+G AK++I
Sbjct: 108 AINGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELI 167
Query: 131 FTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEI 167
+TGR++S ++A GLV + VP + KA+EIA++I
Sbjct: 168 YTGRRISAQEAKEYGLVEFVVPVHLLEEKAIEIAEKI 204
>pdb|1MJ3|A Chain A, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|B Chain B, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|C Chain C, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|D Chain D, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|E Chain E, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|F Chain F, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
Length = 260
Score = 94.0 bits (232), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSF 60
++ L A ET ED + +++ K F AGAD+K +Q + Y S +
Sbjct: 35 LIEELNQALETFEEDPAVGAIVLTGG-EKAFAAGADIKEMQNRTFQ-DCYSGKFLSHWDH 92
Query: 61 LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRL 120
+ + P IA ++ CD+ GE A G PE L IPGAGGTQRL R
Sbjct: 93 ITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRA 152
Query: 121 VGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEI--NQKV 171
VGKS+A +++ TG ++S +DA GLV+ P +A++ A++I N K+
Sbjct: 153 VGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKI 205
>pdb|1DUB|A Chain A, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|B Chain B, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|C Chain C, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|D Chain D, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|E Chain E, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|F Chain F, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|2DUB|A Chain A, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|B Chain B, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|C Chain C, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|D Chain D, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|E Chain E, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|F Chain F, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
Length = 261
Score = 94.0 bits (232), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 88/173 (50%), Gaps = 4/173 (2%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSF 60
++ L A ET ED + +++ + K F AGAD+K +Q + Y S +
Sbjct: 36 LIEELNQALETFEEDPAVGAIVL-TGGEKAFAAGADIKEMQNRTFQ-DCYSGKFLSHWDH 93
Query: 61 LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRL 120
+ + P IA ++ CD+ GE A G PE L IPGAGGTQRL R
Sbjct: 94 ITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRA 153
Query: 121 VGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEI--NQKV 171
VGKS+A +++ TG ++S +DA GLV+ P +A++ A++I N K+
Sbjct: 154 VGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKI 206
>pdb|1EY3|A Chain A, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|B Chain B, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|C Chain C, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|D Chain D, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|E Chain E, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|F Chain F, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
Length = 258
Score = 94.0 bits (232), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSF 60
++ L A ET ED + +++ K F AGAD+K +Q + Y S +
Sbjct: 33 LIEELNQALETFEEDPAVGAIVLTGG-EKAFAAGADIKEMQNRTFQ-DCYSGKFLSHWDH 90
Query: 61 LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRL 120
+ + P IA ++ CD+ GE A G PE L IPGAGGTQRL R
Sbjct: 91 ITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRA 150
Query: 121 VGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEI--NQKV 171
VGKS+A +++ TG ++S +DA GLV+ P +A++ A++I N K+
Sbjct: 151 VGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKI 203
>pdb|4FZW|A Chain A, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
pdb|4FZW|B Chain B, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
Length = 258
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 90/168 (53%), Gaps = 4/168 (2%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLR-STFS 59
+L L + E + D+S +V +I + + F AGADL +M+ ++ +N R ++
Sbjct: 33 LLMQLVNELEAAATDTSISVCVITGNA-RFFAAGADLN--EMAEKDLAATLNDTRPQLWA 89
Query: 60 FLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPR 119
L+A P IA ++ CD+ + GE A GLPE L I+PGAGGTQRL R
Sbjct: 90 RLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIR 149
Query: 120 LVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEI 167
VGKS+A ++ +G ++ + A GLV+ P+ AL++A ++
Sbjct: 150 SVGKSLASKMVLSGESITAQQAQQAGLVSDVFPSDLTLEYALQLASKM 197
>pdb|2PPY|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|B Chain B, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|C Chain C, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|D Chain D, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|E Chain E, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|F Chain F, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
Length = 265
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 8 AFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMS----PSEIHFYVNTLRSTFSFLEA 63
A + I D VV++ S VPK F AGAD+ L+ + ++ + N T +
Sbjct: 43 AIDDIRFDPDIKVVIVXSDVPKFFSAGADINFLRSADPRFKTQFCLFCN---ETLDKIAR 99
Query: 64 LPIPTIAVIDXXXXXXXXXXXXXCDLRICG-EAALLGLPETGLAIIPGAGGTQRLPRLVG 122
P IA ++ CDLR G EA +GLPE L ++ G GGTQRL RL+G
Sbjct: 100 SPQVYIACLEGHTVGGGLEXALACDLRFXGDEAGKIGLPEVSLGVLAGTGGTQRLARLIG 159
Query: 123 KSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEI 167
S A D TG ++ ++A+ +GLVN P + + + E A+++
Sbjct: 160 YSRALDXNITGETITPQEALEIGLVNRVFPQAETRERTREYARKL 204
>pdb|2HW5|A Chain A, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|B Chain B, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|C Chain C, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|D Chain D, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|E Chain E, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|F Chain F, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
Length = 286
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 84/169 (49%), Gaps = 4/169 (2%)
Query: 5 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSFLEAL 64
L A + ED + +++ K F AGAD+K +Q + S Y + + L +
Sbjct: 65 LNQALKIFEEDPAVGAIVLTGG-DKAFAAGADIKEMQ-NLSFQDCYSSKFLKHWDHLTQV 122
Query: 65 PIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKS 124
P IA ++ CD+ GE A PE + IPGAGGTQRL R VGKS
Sbjct: 123 KKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKS 182
Query: 125 VAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEI--NQKV 171
+A +++ TG ++S +DA GLV+ P +A++ A++I N K+
Sbjct: 183 LAMEMVLTGDRISAQDAKQAGLVSKICPVETLVEEAIQCAEKIASNSKI 231
>pdb|3H81|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3H81|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3H81|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
Length = 278
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 12 ISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHF---YVNTLRSTFSFLEALPIPT 68
+ +D ++I S K F AGAD+K + +++ F + +T+ L A+ PT
Sbjct: 64 LDDDPDIGAIIITGSA-KAFAAGADIKEM----ADLTFADAFTADFFATWGKLAAVRTPT 118
Query: 69 IAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKD 128
IA + CD+ I + A G PE L ++PG GG+QRL R +GK+ A D
Sbjct: 119 IAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMD 178
Query: 129 IIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRI 177
+I TGR + +A GLV+ VPA +A A I+Q S R+
Sbjct: 179 LILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARM 227
>pdb|3Q0J|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|D Chain D, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|E Chain E, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|F Chain F, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
Length = 258
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 12 ISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHF---YVNTLRSTFSFLEALPIPT 68
+ +D ++I S K F AGAD+K + +++ F + +T+ L A+ PT
Sbjct: 44 LDDDPDIGAIIITGSA-KAFAAGADIKEM----ADLTFADAFTADFFATWGKLAAVRTPT 98
Query: 69 IAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKD 128
IA + CD+ I + A G PE L ++PG GG+QRL R +GK+ A D
Sbjct: 99 IAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMD 158
Query: 129 IIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRI 177
+I TGR + +A GLV+ VPA +A A I+Q S R+
Sbjct: 159 LILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARM 207
>pdb|3PZK|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3PZK|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3PZK|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3Q0G|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|D Chain D, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|E Chain E, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|F Chain F, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
Length = 257
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 12 ISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHF---YVNTLRSTFSFLEALPIPT 68
+ +D ++I S K F AGAD+K + +++ F + +T+ L A+ PT
Sbjct: 43 LDDDPDIGAIIITGSA-KAFAAGADIKEM----ADLTFADAFTADFFATWGKLAAVRTPT 97
Query: 69 IAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKD 128
IA + CD+ I + A G PE L ++PG GG+QRL R +GK+ A D
Sbjct: 98 IAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMD 157
Query: 129 IIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRI 177
+I TGR + +A GLV+ VPA +A A I+Q S R+
Sbjct: 158 LILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARM 206
>pdb|3MOY|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycob Smegmatis
Length = 263
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
Query: 29 KVFCAGADL-KVLQMSPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXC 87
+ F AGAD+ +++ ++P + L S + L + P +A + C
Sbjct: 65 RAFAAGADIAEMVTLTPHQAR--ERNLLSGWDSLTQVRKPIVAAVAGYALGGGCELAMLC 122
Query: 88 DLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLV 147
DL I + A G PE L I+PG GGTQRL R VGK+ A D+ TGR ++ ++A +GLV
Sbjct: 123 DLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAKAMDLCLTGRSLTAEEAERVGLV 182
Query: 148 NYYVPAGQAQLKALEIAQEI 167
+ VPA +AL +AQ I
Sbjct: 183 SRIVPAADLLDEALAVAQRI 202
>pdb|2WTB|A Chain A, Arabidopsis Thaliana Multifuctional Protein, Mfp2
Length = 725
Score = 79.7 bits (195), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 59 SFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLP 118
LEA P++A ID C RI AA LGLPE L +IPG GGTQRLP
Sbjct: 96 DLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLP 155
Query: 119 RLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQ----AQLKALEIAQEINQKVQSV 174
RLVG + A ++I T + V ++ SLGL++ VP + A+ AL+I V SV
Sbjct: 156 RLVGLTKALEMILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWALDIVGRRKPWVSSV 215
>pdb|3R9Q|A Chain A, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3R9Q|B Chain B, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3R9Q|C Chain C, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Abscessus Atcc 19977 DSM 44196
Length = 262
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 80/171 (46%), Gaps = 8/171 (4%)
Query: 9 FETISEDSSANVVMIRSSVPKVFCAGADLKVLQMS-PSEIHFYVNTLRSTFSFLEALPIP 67
F D A+V ++ FCAGADLK + +E+H + L P
Sbjct: 47 FTEFDADPEASVAVLWGDN-GTFCAGADLKAMGTDRGNELHPHGPGPMGPSRLR--LSKP 103
Query: 68 TIAVIDXXXXXXXXXXXXXCDLRICGEAALLGL--PETGLAIIPGAGGTQRLPRLVGKSV 125
IA I CDLR+ E A+LG+ G+ +I G GT RLPRL+G S
Sbjct: 104 VIAAISGHAVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDG--GTIRLPRLIGHSR 161
Query: 126 AKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFR 176
A D+I TGR V +A+ +GLVN V GQA+ A +A EI Q R
Sbjct: 162 AMDLILTGRPVHANEALDIGLVNRVVARGQAREAAETLAAEIAAFPQQCVR 212
>pdb|1WDK|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDK|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDL|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDL|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDM|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|1WDM|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|2D3T|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
pdb|2D3T|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
Length = 715
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 5/166 (3%)
Query: 2 LRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLK--VLQMSPSEIHFYVNTLRST-- 57
L L+ A + I D+S V++ SS VF GAD+ V + L +
Sbjct: 37 LNELRQAVDAIKADASVKGVIV-SSGKDVFIVGADITEFVENFKLPDAELIAGNLEANKI 95
Query: 58 FSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRL 117
FS E L +PT+A I+ D R+ ++A +GLPE L I PG GGT RL
Sbjct: 96 FSDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRL 155
Query: 118 PRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEI 163
PRL+G A + I +G++ +DA+ + V+ V A + AL++
Sbjct: 156 PRLIGVDNAVEWIASGKENRAEDALKVSAVDAVVTADKLGAAALDL 201
>pdb|2PBP|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) From Geobacillus Kaustophilus Hta426
pdb|2QQ3|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|B Chain B, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|C Chain C, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|D Chain D, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|E Chain E, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|F Chain F, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|G Chain G, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|H Chain H, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|I Chain I, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|J Chain J, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|K Chain K, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|L Chain L, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
Length = 258
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
Query: 8 AFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSFLEALPIP 67
A E + V+++ + + F AGAD++ + ++N + + L + P
Sbjct: 40 AVEAFDRNEKVRVIVL-TGRGRAFAAGADIQEMAKDDPIRLEWLNQF-ADWDRLSIVKTP 97
Query: 68 TIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAK 127
IA ++ CDL + AA G PE L ++PGAGGTQRL +L+G A
Sbjct: 98 MIAAVNGLALGGGFELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKRAL 157
Query: 128 DIIFTGRKVSGKDAMSLGLVNYYV 151
+ ++TG ++S K+A LG+VN V
Sbjct: 158 EWLWTGARMSAKEAEQLGIVNRVV 181
>pdb|3PEA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
Length = 261
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 79/172 (45%), Gaps = 3/172 (1%)
Query: 10 ETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPIP 67
+ + +D + VV+I + F AGAD+K + + TF +E P
Sbjct: 42 DQVEKDDNIRVVVIHGE-GRFFSAGADIKEFTSVTEAKQATELAQLGQVTFERVEKCSKP 100
Query: 68 TIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAK 127
IA I C R E+A LGLPE L +IPG GTQRLPR VGK+ A
Sbjct: 101 VIAAIHGAALGGGLEFAXSCHXRFATESAKLGLPELTLGLIPGFAGTQRLPRYVGKAKAC 160
Query: 128 DIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRILL 179
+ T ++G +A+ GLVN L++A++I K + R +L
Sbjct: 161 EXXLTSTPITGAEALKWGLVNGVFAEETFLDDTLKVAKQIAGKSPATARAVL 212
>pdb|3QKA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
Length = 261
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
Query: 5 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSE-IHFYVNTLRSTFSFLEA 63
L AF D SA+V ++ + FCAGADLK + + +H +
Sbjct: 40 LYSAFAEFDRDESASVAVLCGN-GGTFCAGADLKAFGTAEANAVHRTGPGPMGPSRMM-- 96
Query: 64 LPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGL--PETGLAIIPGAGGTQRLPRLV 121
L P IA + CDLR+ + A+ G+ G+ +I G GT RLPRL+
Sbjct: 97 LSKPVIAAVSGYAVAGGLELALWCDLRVAEQDAVFGVFCRRWGVPLIDG--GTVRLPRLI 154
Query: 122 GKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQ 157
G S A D+I TGR V +A+++GL N VP GQA+
Sbjct: 155 GHSRAMDMILTGRAVQADEALAIGLANRVVPNGQAR 190
>pdb|1DCI|A Chain A, Dienoyl-Coa Isomerase
pdb|1DCI|B Chain B, Dienoyl-Coa Isomerase
pdb|1DCI|C Chain C, Dienoyl-Coa Isomerase
Length = 275
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 15/183 (8%)
Query: 2 LRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADL-----KVLQ---MSPSEIHFYVNT 53
R L F+ IS+DS V++ S K+F +G DL +LQ + I +Y+
Sbjct: 33 WRELVECFQKISKDSDCRAVVV-SGAGKMFTSGIDLMDMASDILQPPGDDVARIAWYLRD 91
Query: 54 L----RSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIP 109
L + TF+ +E P P IA I CD+R C + A + E + +
Sbjct: 92 LISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAA 151
Query: 110 GAGGTQRLPRLVG-KSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLK-ALEIAQEI 167
G QRLP+++G +S+ ++ FT RK+ +A+ GLV+ P L A +A +I
Sbjct: 152 DVGTLQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADI 211
Query: 168 NQK 170
+ K
Sbjct: 212 SSK 214
>pdb|3R0O|A Chain A, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
pdb|3R0O|B Chain B, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
pdb|3R0O|C Chain C, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
Length = 273
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 71/161 (44%)
Query: 8 AFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSFLEALPIP 67
A E D V+I + K FCAGADLK + + H + P
Sbjct: 50 ALEEAQRDPEVWAVVITGAGDKSFCAGADLKAISRGENLYHAEHPEWGFAGYVHHFIDKP 109
Query: 68 TIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAK 127
TIA ++ DL I E+A GLPE +I GAGG R+ + + VA
Sbjct: 110 TIAAVNGTALGGGSELALASDLVIACESASFGLPEVKRGLIAGAGGVFRIVEQLPRKVAL 169
Query: 128 DIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEIN 168
+++ TG ++ DA+ GL+N VP G AL +A+ I
Sbjct: 170 ELVLTGEPMTASDALRWGLINEVVPDGTVVEAALALAERIT 210
>pdb|4F47|A Chain A, The Structure Of Enoyl-Coa Hydratase Echa19 From
Mycobacterium Marinum
Length = 278
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 87/186 (46%), Gaps = 9/186 (4%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTF-- 58
M++ + A++ + D ++ + FCAG DLK P F + +
Sbjct: 48 MMQIMVEAWDRVDNDPDIRCCIL-TGAGGYFCAGMDLKAATKKPPGDSFKDGSYDPSRID 106
Query: 59 SFLEA--LPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQR 116
+ L+ L P IA ++ D+R+ E+A G+ E ++ P G R
Sbjct: 107 ALLKGRRLKKPLIAAVEGPAIAGGTEILQGTDIRVAAESAKFGISEAKWSLYPMGGSAVR 166
Query: 117 LPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQK----VQ 172
L R + +VA D++ TGR ++ +A +GLV + VP GQA KALEIA+ I VQ
Sbjct: 167 LVRQIPYTVACDLLLTGRHITAAEAKEMGLVGHVVPDGQALTKALEIAEIIAANGPLAVQ 226
Query: 173 SVFRIL 178
++ R +
Sbjct: 227 AILRTI 232
>pdb|1UIY|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Thermus
Thermophilus Hb8
Length = 253
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 6/177 (3%)
Query: 5 LKHAFETISEDSSANVVMIRSSVPKVFCAGADL----KVLQMSPSEIHFYVNTLRSTFSF 60
L A + + D V++ + K F AGADL +V ++ E + + +L F
Sbjct: 31 LLQALDDLEADPGVRAVVL-TGRGKAFSAGADLAFLERVTELGAEENYRHSLSLXRLFHR 89
Query: 61 LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRL 120
+ P PT+A ++ CDL + E A LG E + + A + L R
Sbjct: 90 VYTYPKPTVAAVNGPAVAGGAGLALACDLVVXDEEARLGYTEVKIGFV-AALVSVILVRA 148
Query: 121 VGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRI 177
VG+ AKD++ TGR V ++A +LGLVN P G+A +A +A+E+ + + R+
Sbjct: 149 VGEKAAKDLLLTGRLVEAREAKALGLVNRIAPPGKALEEAKALAEEVAKNAPTSLRL 205
>pdb|2IEX|A Chain A, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
pdb|2IEX|B Chain B, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
pdb|2IEX|C Chain C, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
Length = 272
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 6/175 (3%)
Query: 8 AFETISEDSSANVVMIRSSVPKVFCAGADLKVL----QMSPSEIHFYVNTLRSTFSFLEA 63
AF +DS+ V+++ + K FC+G D KV + EI +N L +
Sbjct: 47 AFTKARDDSNIGVIILTGAGGKAFCSGGDQKVRGHGGYVGEDEIP-RLNVL-DLQRLIRV 104
Query: 64 LPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGK 123
+P P IA++ CDL I + A+ G + G G L R+VG
Sbjct: 105 IPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGAGYLARIVGH 164
Query: 124 SVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
A++I + R+ + ++A+ +GLVN VP Q + + ++ AQEI +K + R L
Sbjct: 165 KKAREIWYLCRQYTAQEALEMGLVNKVVPLEQLEEETVKWAQEILEKSPTAIRFL 219
>pdb|3ZW8|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW8|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW9|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZW9|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZWA|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWA|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWC|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
pdb|3ZWC|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
Length = 742
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 7/178 (3%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSF 60
++R +++ + D + ++I FCAGAD+ + L S
Sbjct: 48 VIREVRNGLQKAGSDHTVKAIVI-CGANGNFCAGADIHGFSAFTPGL-----ALGSLVDE 101
Query: 61 LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRL 120
++ P +A I C RI A +GLPE L I+PGA GTQ LPR+
Sbjct: 102 IQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRV 161
Query: 121 VGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
VG VA D+I +G+ +S +A+ LG+++ V + + +A++ AQ+I K RI
Sbjct: 162 VGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVE-EAIKFAQKIIDKPIEPRRIF 218
>pdb|2X58|A Chain A, The Crystal Structure Of Mfe1 Liganded With Coa
pdb|2X58|B Chain B, The Crystal Structure Of Mfe1 Liganded With Coa
Length = 727
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 7/178 (3%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSF 60
++R +++ + D + ++I FCAGAD+ + L S
Sbjct: 33 VIREVRNGLQKAGSDHTVKAIVI-CGANGNFCAGADIHGFSAFTPGL-----ALGSLVDE 86
Query: 61 LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRL 120
++ P +A I C RI A +GLPE L I+PGA GTQ LPR+
Sbjct: 87 IQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRV 146
Query: 121 VGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
VG VA D+I +G+ +S +A+ LG+++ V + + +A++ AQ+I K RI
Sbjct: 147 VGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVE-EAIKFAQKIIDKPIEPRRIF 203
>pdb|2VRE|A Chain A, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
pdb|2VRE|B Chain B, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
pdb|2VRE|C Chain C, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
Length = 296
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 14/170 (8%)
Query: 2 LRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADL-----KVLQMSPSE---IHFYVNT 53
R + F IS D+ V+I S K+F AG DL +LQ + I +Y+
Sbjct: 60 WREMVECFNKISRDADCRAVVI-SGAGKMFTAGIDLMDMASDILQPKGDDVARISWYLRD 118
Query: 54 L----RSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIP 109
+ + TF+ +E P P IA + CD+R C + A + E + +
Sbjct: 119 IITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAA 178
Query: 110 GAGGTQRLPRLVG-KSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQL 158
G QRLP+++G +S+ ++ FT RK+ +A+ GLV+ P + L
Sbjct: 179 DVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVML 228
>pdb|3TRR|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|D Chain D, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|E Chain E, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|F Chain F, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 256
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 3 RGLKHAFETISEDSSANV-VMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSFL 61
+GL A + + DSSA++ V I + FCAG DLK + + F
Sbjct: 37 QGLAAAADQL--DSSADLSVAIITGAGGNFCAGMDLKAFVSGEAVLS------ERGLGFT 88
Query: 62 EALP-IPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRL 120
P P IA ++ CDL + G +A G+PE ++ GAGG RLP
Sbjct: 89 NVPPRKPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPNR 148
Query: 121 VGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEIN 168
+ VA ++ TG + +DA G +N V GQA ALE+A +I
Sbjct: 149 IPYQVAMELALTGESFTAEDAAKYGFINRLVDDGQALDTALELAAKIT 196
>pdb|3QXZ|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3QXZ|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3QXZ|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 265
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 9/173 (5%)
Query: 3 RGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQ---MSPSEIHFYVNTLR-STF 58
R L A++ + +D + V+++ + P FC+GA + +P F + ++ + F
Sbjct: 37 RQLGAAYQRLDDDPAVRVIVL-TGAPPAFCSGAQISAAAETFAAPRNPDFSASPVQPAAF 95
Query: 59 SFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLP 118
L P IA ++ D+RI E +P+ + P A LP
Sbjct: 96 E----LRTPVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLP 151
Query: 119 RLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKV 171
RLVG +VA +++ TG S + A+ GL N +PAG+ AL +A +I V
Sbjct: 152 RLVGTAVAAELLLTGASFSAQRAVETGLANRCLPAGKVLGAALRMAHDIATNV 204
>pdb|3MYB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium
Smegm
pdb|3MYB|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium
Smegm
pdb|3MYB|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium
Smegm
Length = 286
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSF 60
ML L AF T++ED S V++ +S K FCAG DLK ++ PS ++ R T
Sbjct: 54 MLAALGEAFGTLAEDESVRAVVLAAS-GKAFCAGHDLKEMRAEPSREYYEKLFARCTDVM 112
Query: 61 L--EALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLP 118
L + LP P IA + CDL + A + + + G L
Sbjct: 113 LAIQRLPAPVIARVHGIATAAGCQLVAMCDLAVATRDARFAVSGINVGLFCSTPGVA-LS 171
Query: 119 RLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYV 151
R VG+ A +++ TG VS DA LGLVN V
Sbjct: 172 RNVGRKAAFEMLVTGEFVSADDAKGLGLVNRVV 204
>pdb|3ZWB|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
pdb|3ZWB|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
Length = 742
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 7/178 (3%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSF 60
++R +++ + D + ++I FCAGAD+ + L S
Sbjct: 48 VIREVRNGLQKAGSDHTVKAIVI-CGANGNFCAGADIHGFSAFTPGL-----ALGSLVDE 101
Query: 61 LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRL 120
++ P +A I C RI A +GLP L I+PGA GTQ LPR+
Sbjct: 102 IQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPAVTLGILPGARGTQLLPRV 161
Query: 121 VGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
VG VA D+I +G+ +S +A+ LG+++ V + + +A++ AQ+I K RI
Sbjct: 162 VGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVE-EAIKFAQKIIDKPIEPRRIF 218
>pdb|3HIN|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Rhodopseudomonas Palustris Cga009
pdb|3HIN|B Chain B, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Rhodopseudomonas Palustris Cga009
Length = 275
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 1/141 (0%)
Query: 31 FCAGADLKVL-QMSPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDL 89
F AG DL L + +E + T F ++ +P IA + +
Sbjct: 71 FSAGLDLSELRERDATEGLVHSQTWHRVFDKIQYCRVPVIAALKGAVIGGGLELACAAHI 130
Query: 90 RICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNY 149
R+ +A LPE I G GG+ RLPRL+G + D++ TGR S + + G Y
Sbjct: 131 RVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARMADMMLTGRVYSAAEGVVHGFSQY 190
Query: 150 YVPAGQAQLKALEIAQEINQK 170
+ G A KALE+ + Q
Sbjct: 191 LIENGSAYDKALELGNRVAQN 211
>pdb|2VSU|C Chain C, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 275
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 7/180 (3%)
Query: 3 RGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKV----LQMSPSEIHFYVNTLRSTF 58
R + ET+ +D +A V+++ + + + AG DLK + P + + S +
Sbjct: 39 REMIDVLETLEQDPAAGVLVL-TGAGEAWTAGMDLKEYFREVDAGPEILQEKIRREASQW 97
Query: 59 SF--LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQR 116
+ L PTIA+++ CDL IC + A GL E I PG ++
Sbjct: 98 QWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDLAICADEATFGLSEINWGIPPGNLVSKA 157
Query: 117 LPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFR 176
+ VG + I TG+ G+ A +GLVN VP Q + +E+A+ + +K V R
Sbjct: 158 MADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLR 217
>pdb|2VSU|F Chain F, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 7/180 (3%)
Query: 3 RGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKV----LQMSPSEIHFYVNTLRSTF 58
R + ET+ +D +A V+++ + + + AG DLK + P + + S +
Sbjct: 39 REMIDVLETLEQDPAAGVLVL-TGAGEAWTAGMDLKEYFREVDAGPEILQEKIRREASQW 97
Query: 59 SF--LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQR 116
+ L PTIA+++ CDL IC + A GL E I PG ++
Sbjct: 98 QWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDLAICADEATFGLSEINWGIPPGNLVSKA 157
Query: 117 LPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFR 176
+ VG + I TG+ G+ A +GLVN VP Q + +E+A+ + +K V R
Sbjct: 158 MADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLR 217
>pdb|2VSU|A Chain A, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|B Chain B, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|D Chain D, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 7/180 (3%)
Query: 3 RGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKV----LQMSPSEIHFYVNTLRSTF 58
R + ET+ +D +A V+++ + + + AG DLK + P + + S +
Sbjct: 39 REMIDVLETLEQDPAAGVLVL-TGAGEAWTAGMDLKEYFREVDAGPEILQEKIRREASQW 97
Query: 59 SF--LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQR 116
+ L PTIA+++ CDL IC + A GL E I PG ++
Sbjct: 98 QWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDLAICADEATFGLSEINWGIPPGNLVSKA 157
Query: 117 LPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFR 176
+ VG + I TG+ G+ A +GLVN VP Q + +E+A+ + +K V R
Sbjct: 158 MADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLR 217
>pdb|2J5I|B Chain B, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|C Chain C, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|D Chain D, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|E Chain E, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|F Chain F, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|G Chain G, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|H Chain H, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|J Chain J, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|K Chain K, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|L Chain L, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2VSS|A Chain A, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|B Chain B, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|C Chain C, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|D Chain D, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 7/180 (3%)
Query: 3 RGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKV----LQMSPSEIHFYVNTLRSTF 58
R + ET+ +D +A V+++ + + + AG DLK + P + + S +
Sbjct: 39 REMIDVLETLEQDPAAGVLVL-TGAGEAWTAGMDLKEYFREVDAGPEILQEKIRREASQW 97
Query: 59 SF--LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQR 116
+ L PTIA+++ CDL IC + A GL E I PG ++
Sbjct: 98 QWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKA 157
Query: 117 LPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFR 176
+ VG + I TG+ G+ A +GLVN VP Q + +E+A+ + +K V R
Sbjct: 158 MADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLR 217
>pdb|2VSS|F Chain F, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 7/180 (3%)
Query: 3 RGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKV----LQMSPSEIHFYVNTLRSTF 58
R + ET+ +D +A V+++ + + + AG DLK + P + + S +
Sbjct: 39 REMIDVLETLEQDPAAGVLVL-TGAGEAWTAGMDLKEYFREVDAGPEILQEKIRREASQW 97
Query: 59 SF--LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQR 116
+ L PTIA+++ CDL IC + A GL E I PG ++
Sbjct: 98 QWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKA 157
Query: 117 LPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFR 176
+ VG + I TG+ G+ A +GLVN VP Q + +E+A+ + +K V R
Sbjct: 158 MADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLR 217
>pdb|2J5I|I Chain I, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 7/180 (3%)
Query: 3 RGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKV----LQMSPSEIHFYVNTLRSTF 58
R + ET+ +D +A V+++ + + + AG DLK + P + + S +
Sbjct: 39 REMIDVLETLEQDPAAGVLVL-TGAGEAWTAGMDLKEYFREVDAGPEILQEKIRREASQW 97
Query: 59 SF--LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQR 116
+ L PTIA+++ CDL IC + A GL E I PG ++
Sbjct: 98 QWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKA 157
Query: 117 LPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFR 176
+ VG + I TG+ G+ A +GLVN VP Q + +E+A+ + +K V R
Sbjct: 158 MADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLR 217
>pdb|2J5I|A Chain A, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 7/180 (3%)
Query: 3 RGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKV----LQMSPSEIHFYVNTLRSTF 58
R + ET+ +D +A V+++ + + + AG DLK + P + + S +
Sbjct: 39 REMIDVLETLEQDPAAGVLVL-TGAGEAWTAGMDLKEYFREVDAGPEILQEKIRREASQW 97
Query: 59 SF--LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQR 116
+ L PTIA+++ CDL IC + A GL E I PG ++
Sbjct: 98 QWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKA 157
Query: 117 LPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFR 176
+ VG + I TG+ G+ A +GLVN VP Q + +E+A+ + +K V R
Sbjct: 158 MADTVGHRQSLMYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLR 217
>pdb|2VSS|E Chain E, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 7/180 (3%)
Query: 3 RGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKV----LQMSPSEIHFYVNTLRSTF 58
R + ET+ +D +A V+++ + + + AG DLK + P + + S +
Sbjct: 39 REMIDVLETLEQDPAAGVLVL-TGAGEAWTAGMDLKEYFREVDAGPEILQEKIRREASQW 97
Query: 59 SF--LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQR 116
+ L PTIA+++ CDL IC + A GL E I PG ++
Sbjct: 98 QWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINYGIPPGNLVSKA 157
Query: 117 LPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFR 176
+ VG + I TG+ G+ A +GLVN VP Q + +E+A+ + +K V R
Sbjct: 158 MADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLR 217
>pdb|2VSU|E Chain E, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 7/180 (3%)
Query: 3 RGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKV----LQMSPSEIHFYVNTLRSTF 58
R + ET+ +D +A V+++ + + + AG DLK + P + + S +
Sbjct: 39 REMIDVLETLEQDPAAGVLVL-TGAGEAWTAGMDLKEYFREVDAGPEILQEKIRREASQW 97
Query: 59 SF--LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQR 116
+ L PTIA+++ CDL IC + A GL E I PG ++
Sbjct: 98 QWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDLAICADEATFGLSEINYGIPPGNLVSKA 157
Query: 117 LPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFR 176
+ VG + I TG+ G+ A +GLVN VP Q + +E+A+ + +K V R
Sbjct: 158 MADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLR 217
>pdb|3RSI|A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3RSI|B Chain B, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3RSI|C Chain C, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
Length = 265
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 68/162 (41%), Gaps = 3/162 (1%)
Query: 8 AFETISEDSSANVVMIRSSVPKVFCAGADLKVLQM--SPSEIHFYVNTLRSTFSFLEALP 65
A++ I D ++ + +C G DL M S T+ L
Sbjct: 44 AWDEIDHDDGIRAAIL-TGAGSAYCVGGDLSDGWMVRDGSAPPLDPATIGKGLLLSHTLT 102
Query: 66 IPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSV 125
P IA ++ D+R+ E A GLPE ++PGAG RL R + +
Sbjct: 103 KPLIAAVNGACLGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQIPYTK 162
Query: 126 AKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEI 167
A ++I TG ++ +A GLV + VPAG A KA +A I
Sbjct: 163 AMEMILTGEPLTAFEAYHFGLVGHVVPAGTALDKARSLADRI 204
>pdb|3R9T|A Chain A, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
pdb|3R9T|B Chain B, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
pdb|3R9T|C Chain C, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
Length = 267
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 62/151 (41%)
Query: 4 GLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSFLEA 63
G+ A E D V++ + K FCAGADLK + + H
Sbjct: 40 GVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLYHPDHPEWGFAGYVRHF 99
Query: 64 LPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGK 123
+ PTIA ++ DL + E A GLPE +I AGG R+ + +
Sbjct: 100 IDKPTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPR 159
Query: 124 SVAKDIIFTGRKVSGKDAMSLGLVNYYVPAG 154
VA ++ TG +S A GL+N V AG
Sbjct: 160 KVAMRLLLTGEPLSAAAARDWGLINEVVEAG 190
>pdb|3R9S|A Chain A, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
pdb|3R9S|B Chain B, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
pdb|3R9S|C Chain C, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
Length = 267
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 62/151 (41%)
Query: 4 GLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSFLEA 63
G+ A E D V++ + K FCAGADLK + + H
Sbjct: 40 GVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLYHPDHPEWGFAGYVRHF 99
Query: 64 LPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGK 123
+ PTIA ++ DL + E A GLPE +I AGG R+ + +
Sbjct: 100 IDKPTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPR 159
Query: 124 SVAKDIIFTGRKVSGKDAMSLGLVNYYVPAG 154
VA ++ TG +S A GL+N V AG
Sbjct: 160 KVAMRLLLTGEPLSAAAARDWGLINEVVEAG 190
>pdb|3T88|A Chain A, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|B Chain B, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|C Chain C, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|D Chain D, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|E Chain E, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|F Chain F, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T89|A Chain A, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|B Chain B, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|C Chain C, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|D Chain D, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|E Chain E, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|F Chain F, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
Length = 289
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 7/169 (4%)
Query: 15 DSSANVVMIRSSVPKVFCAGADLKVL-----QMSPSEIHFYVNTLRSTFSFLEALPIPTI 69
D + V+++ + K FC+G D KV S +H ++N L + P P +
Sbjct: 70 DDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVH-HLNVLDFQRQ-IRTCPKPVV 127
Query: 70 AVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDI 129
A++ CDL I + A+ G + G G + R+VG+ A++I
Sbjct: 128 AMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREI 187
Query: 130 IFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
F R+ K A+ +GLVN VP + + + +E+ Q R L
Sbjct: 188 WFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCL 236
>pdb|4ELS|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|B Chain B, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|C Chain C, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|D Chain D, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|E Chain E, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|F Chain F, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELW|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|B Chain B, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|C Chain C, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|D Chain D, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|E Chain E, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|F Chain F, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELX|A Chain A, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|B Chain B, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|C Chain C, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|D Chain D, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|E Chain E, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|F Chain F, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
Length = 285
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 7/169 (4%)
Query: 15 DSSANVVMIRSSVPKVFCAGADLKVL-----QMSPSEIHFYVNTLRSTFSFLEALPIPTI 69
D + V+++ + K FC+G D KV S +H ++N L + P P +
Sbjct: 66 DDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVH-HLNVLDFQRQ-IRTCPKPVV 123
Query: 70 AVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDI 129
A++ CDL I + A+ G + G G + R+VG+ A++I
Sbjct: 124 AMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREI 183
Query: 130 IFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
F R+ K A+ +GLVN VP + + + +E+ Q R L
Sbjct: 184 WFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCL 232
>pdb|3QYR|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
Length = 253
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 71/172 (41%), Gaps = 9/172 (5%)
Query: 8 AFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSFLEALPIP 67
A D +VV+I + P VFCAG DLK L S + L AL P
Sbjct: 43 ALADAETDDDVDVVIITGADP-VFCAGLDLKELGGS--------SALPDISPRWPALTKP 93
Query: 68 TIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAK 127
I I+ CD+ I E A + ++P G + RLP+ VG +A+
Sbjct: 94 VIGAINGAAVTGGLELALYCDILIASENARFADTHARVGLLPTWGLSVRLPQKVGIGLAR 153
Query: 128 DIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRILL 179
+ TG +S DA+ GLV VP Q A +A I Q+ R LL
Sbjct: 154 RMSLTGDYLSAADALRAGLVTEVVPHDQLLGAAQAVAASIVGNNQNAVRALL 205
>pdb|3P85|A Chain A, Crystal Structure Enoyl-Coa Hydratase From Mycobacterium
Avium
Length = 270
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 71/172 (41%), Gaps = 9/172 (5%)
Query: 8 AFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSFLEALPIP 67
A D +VV+I + P VFCAG DLK L S + L AL P
Sbjct: 60 ALADAETDDDVDVVIITGADP-VFCAGLDLKELGGS--------SALPDISPRWPALTKP 110
Query: 68 TIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAK 127
I I+ CD+ I E A + ++P G + RLP+ VG +A+
Sbjct: 111 VIGAINGAAVTGGLELALYCDILIASENARFADTHARVGLLPTWGLSVRLPQKVGIGLAR 170
Query: 128 DIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRILL 179
+ TG +S DA+ GLV VP Q A +A I Q+ R LL
Sbjct: 171 RMSLTGDYLSAADALRAGLVTEVVPHDQLLGAARAVAASIVGNNQNAVRALL 222
>pdb|3H02|A Chain A, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|B Chain B, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|C Chain C, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|D Chain D, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|E Chain E, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|F Chain F, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium
Length = 288
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 69/169 (40%), Gaps = 7/169 (4%)
Query: 15 DSSANVVMIRSSVPKVFCAGADLKVL-----QMSPSEIHFYVNTLRSTFSFLEALPIPTI 69
D + V+++ K FCAG D KV S +H ++N L + P P +
Sbjct: 69 DDNVGVIILTGEGDKAFCAGGDQKVRGDYGGYQDDSGVH-HLNVLDFQRQ-IRTCPKPVV 126
Query: 70 AVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDI 129
A + CDL I E A+ G + G G R+VG+ A++I
Sbjct: 127 AXVAGYSIGGGHVLHXXCDLTIAAENAIFGQTGPKVGSFDGGWGASYXARIVGQKKAREI 186
Query: 130 IFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
F R+ + A+ GLVN VP + + + +E Q R L
Sbjct: 187 WFLCRQYDAQQALDXGLVNTVVPLADLEKETVRWCREXLQNSPXALRCL 235
>pdb|4EML|A Chain A, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|B Chain B, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|C Chain C, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|D Chain D, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|E Chain E, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|F Chain F, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
Length = 275
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 19/187 (10%)
Query: 5 LKHAFETISEDSSANVVMIRSSVPK-----VFCAGADLKVL--------QMSPSEIHFYV 51
L AF ED+ VV++ + P FC+G D V Q +P +
Sbjct: 42 LYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGEGGYIDDQGTPR-----L 96
Query: 52 NTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGA 111
N L + ++P IA++ CDL I + A+ G + G
Sbjct: 97 NVL-DLQRLIRSMPKVVIALVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGG 155
Query: 112 GGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKV 171
G+ L R+VG+ A++I + R+ S ++A +G+VN VP + + + ++ A+EI K
Sbjct: 156 FGSSYLARIVGQKKAREIWYLCRQYSAQEAERMGMVNTVVPVDRLEEEGIQWAKEILSKS 215
Query: 172 QSVFRIL 178
R L
Sbjct: 216 PLAIRCL 222
>pdb|4DI1|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
pdb|4DI1|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
pdb|4DI1|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
Length = 277
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 29 KVFCAGADLKVLQ-MSPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXC 87
++F AG D+ L+ ++ E + A+P PT+A +
Sbjct: 78 EIFSAGDDMPELRTLNAPEADTAARVRLEAIDAVAAIPKPTVAAVTGYALGAGLTLALAA 137
Query: 88 DLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLV 147
D R+ G+ G E +IPG GG RL R+VG S AK+++F+GR ++A++LGL+
Sbjct: 138 DWRVSGDNVKFGATEILAGLIPGGGGMGRLTRVVGSSRAKELVFSGRFFDAEEALALGLI 197
Query: 148 NYYV 151
+ V
Sbjct: 198 DDMV 201
>pdb|2VX2|A Chain A, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|B Chain B, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|C Chain C, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|D Chain D, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|E Chain E, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|F Chain F, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|G Chain G, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|H Chain H, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|I Chain I, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
Length = 287
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 4/169 (2%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVL-QMSPSEIHFYV-NTLRSTF 58
ML+ L+ ++ + V++I + P VF +G DLK L + + H V T
Sbjct: 61 MLKSLQSDILHDADSNDLKVIIISAEGP-VFSSGHDLKELTEEQGRDYHAEVFQTCSKVM 119
Query: 59 SFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLP 118
+ P+P IA+++ CD+ + + + P + + G L
Sbjct: 120 MHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVA-LA 178
Query: 119 RLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEI 167
R V + VA +++FTG +S ++A+ GL++ VP + Q + + IA++I
Sbjct: 179 RAVPRKVALEMLFTGEPISAQEALLHGLLSKVVPEAELQEETMRIARKI 227
>pdb|3HRX|A Chain A, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|B Chain B, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|C Chain C, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|D Chain D, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|E Chain E, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|F Chain F, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
Length = 254
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 1/169 (0%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSF 60
+L L A + ED +++ + + F AG DL + ++
Sbjct: 28 LLDALYAALKEGEEDREVRALLL-TGAGRAFSAGQDLTEFGDRKPDYEAHLRRYNRVVEA 86
Query: 61 LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRL 120
L L P + ++ DLR+ A + ++P +G + LPRL
Sbjct: 87 LSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRL 146
Query: 121 VGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQ 169
VG + A++++ ++S ++A++LGLV+ VPA + +AL +A+E+ Q
Sbjct: 147 VGLAKAQELLLLSPRLSAEEALALGLVHRVVPAEKLMEEALSLAKELAQ 195
>pdb|2UZF|A Chain A, Crystal Structure Of Staphylococcus Aureus
1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In
Complex With Acetoacetyl Coa
pdb|2UZF|B Chain B, Crystal Structure Of Staphylococcus Aureus
1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In
Complex With Acetoacetyl Coa
Length = 273
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 2/173 (1%)
Query: 8 AFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSP--SEIHFYVNTLRSTFSFLEALP 65
AF +D + +V+++ FC+G D K E + + +P
Sbjct: 48 AFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIP 107
Query: 66 IPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSV 125
P IA++ CDL I + A+ G + G+ L R+VG
Sbjct: 108 KPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKK 167
Query: 126 AKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
A++I + R+ + ++A+ +GLVN VP + + + ++ +EI + + R L
Sbjct: 168 AREIWYLCRQYNAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALRFL 220
>pdb|3GKB|A Chain A, Crystal Structure Of A Putative Enoyl-coa Hydratase From
Streptomyces Avermitilis
pdb|3GKB|B Chain B, Crystal Structure Of A Putative Enoyl-coa Hydratase From
Streptomyces Avermitilis
pdb|3GKB|C Chain C, Crystal Structure Of A Putative Enoyl-coa Hydratase From
Streptomyces Avermitilis
Length = 287
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 7/174 (4%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKV------LQMSPSEIHFYVNTL 54
M+R L+ T+++DSS V++ S+ P+ F A D+++ LQ + VN
Sbjct: 36 MMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDALQELAASAPADVNVF 95
Query: 55 RSTFSFLEALPIPTIA-VIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGG 113
++ + P TI + E A LG E + IIPG GG
Sbjct: 96 QAVGELIRHQPQVTIVKLAGKARGGGAEFVAAADMAFAAAETAGLGQIEALMGIIPGGGG 155
Query: 114 TQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEI 167
TQ L VG++ A +++ T + A S G +N +PA + +A+ I
Sbjct: 156 TQYLRGRVGRNRALEVVLTADLFDAETAASYGWINRALPADELDEYVDRVARNI 209
>pdb|4HDT|A Chain A, Crystal Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Thermoresistibile
Length = 353
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 7/157 (4%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEI-----HFYVNTLR 55
M+ + D S V++ + + CAG D+ + S F+ + R
Sbjct: 37 MVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSAKADGAEARRFWFDEYR 96
Query: 56 STFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQ 115
+ + P P ++++D ++R+ + + +PE G+ IP GGT
Sbjct: 97 LN-AHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTDTTKMAMPEVGIGFIPDVGGTY 155
Query: 116 RLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVP 152
L R GK + TG SG DA+ +G ++YVP
Sbjct: 156 LLSRAPGK-LGLHAALTGAPFSGADAIVMGFADHYVP 191
>pdb|3HE2|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
Length = 264
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 5/164 (3%)
Query: 15 DSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSFLEALPIPTIAVIDX 74
D SA +++ + FCAGADL + Y + L ++A P+P + I+
Sbjct: 62 DGSARAIVL-TGQGTAFCAGADLSGDAFAAD----YPDRLIELHKAMDASPMPVVGAING 116
Query: 75 XXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGR 134
CDLR+ A P + + +RL LVG A+ ++ +
Sbjct: 117 PAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAE 176
Query: 135 KVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
K++ + A+ G+ N AQ A EIA+ +Q R+L
Sbjct: 177 KLTAEIALHTGMANRIGTLADAQAWAAEIARLAPLAIQHAKRVL 220
>pdb|1EF8|A Chain A, Crystal Structure Of Methylmalonyl Coa Decarboxylase
pdb|1EF8|B Chain B, Crystal Structure Of Methylmalonyl Coa Decarboxylase
pdb|1EF8|C Chain C, Crystal Structure Of Methylmalonyl Coa Decarboxylase
pdb|1EF9|A Chain A, The Crystal Structure Of Methylmalonyl Coa Decarboxylase
Complexed With 2s-Carboxypropyl Coa
Length = 261
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 63/142 (44%)
Query: 29 KVFCAGADLKVLQMSPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCD 88
KVF AG D+ L + Y + LR ++ P P I++++ D
Sbjct: 60 KVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISMVEGSVWGGAFEMIMSSD 119
Query: 89 LRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVN 148
L I + + L + G L R G + K++IFT ++ + A+++G++N
Sbjct: 120 LIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITAQRALAVGILN 179
Query: 149 YYVPAGQAQLKALEIAQEINQK 170
+ V + + L++A I++K
Sbjct: 180 HVVEVEELEDFTLQMAHHISEK 201
>pdb|3T3W|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|B Chain B, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|C Chain C, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|D Chain D, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|E Chain E, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|F Chain F, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
Length = 279
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 13/175 (7%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHF---YVNTLRST 57
+L L A+ +ED+ +V+++R++ K F AG DL+ P ++ Y + R
Sbjct: 48 LLDELDAAWTRAAEDNDVSVIVLRAN-GKHFSAGHDLRGGGPVPDKLTLEFIYAHESRRY 106
Query: 58 FSF---LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAI--IPGAG 112
+ +P P+IA + CDL I E AL P + I + G
Sbjct: 107 LEYSLRWRNVPKPSIAAVQGRCISGGLLLCWPCDLIIAAEDALFSDPVVLMDIGGVEYHG 166
Query: 113 GTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEI 167
T L G AK+I+FTGR ++ ++ G+VN VP + + +A EI
Sbjct: 167 HTWEL----GPRKAKEILFTGRAMTAEEVAQTGMVNRVVPRDRLDAETRALAGEI 217
>pdb|3OME|A Chain A, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|B Chain B, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|C Chain C, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|D Chain D, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|E Chain E, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|F Chain F, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 282
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 13/175 (7%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSF 60
+L L A+ +ED+ V+++R++ K F AG DL+ P +I +
Sbjct: 51 LLDELDAAWTRAAEDNEVKVIILRAN-GKHFSAGHDLRGGGEVPEKISLEFIIQHEARRY 109
Query: 61 LE------ALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPET--GLAIIPGAG 112
L+ +P P+IA + CDL + + AL P G+ + G
Sbjct: 110 LDYTLRWRNVPKPSIAAVQGRCISGGLLLCWPCDLILASDDALFSDPVALMGIGGVEYHG 169
Query: 113 GTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEI 167
T L G AK+I+FTGR ++ ++A G+VN V + + E+A++I
Sbjct: 170 HTWEL----GPRKAKEILFTGRALTAEEAERTGMVNRVVARDELDAQTRELAEQI 220
>pdb|3RRV|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
Length = 276
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 6/180 (3%)
Query: 4 GLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSFLEA 63
GL ++ +++D +A +I + + F AG D L+ ++ T+R +
Sbjct: 59 GLARLWQRLTDDPTARAAVI-TGAGRAFSAGGDFGYLKELSADADLRAKTIRDGREIVLG 117
Query: 64 LP---IPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRL 120
+ IP +A ++ D+ E A L P + ++ GG P
Sbjct: 118 MARCRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLH 177
Query: 121 VGKSVAKDIIFTGRKVSGKDAMSLGLVNYYV--PAGQAQLKALEIAQEINQKVQSVFRIL 178
+ +AK+ TG ++S + A+ LGL N+ P +A A +I + Q V+S R+L
Sbjct: 178 ISLLLAKEYALTGTRISAQRAVELGLANHVADDPVAEAIACAKKILELPQQAVESTKRVL 237
>pdb|3H0U|A Chain A, Crystal Structure Of A Putative Enoyl-Coa Hydratase From
Streptomyces Avermitilis
pdb|3H0U|B Chain B, Crystal Structure Of A Putative Enoyl-Coa Hydratase From
Streptomyces Avermitilis
pdb|3H0U|C Chain C, Crystal Structure Of A Putative Enoyl-Coa Hydratase From
Streptomyces Avermitilis
Length = 289
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Query: 58 FSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICG-EAALLGLPETGLAIIPGAGGTQR 116
F L LP TIA + CD+R E A+LG PE G+ PGAG Q
Sbjct: 96 FRKLSQLPAVTIAKLRGRARGAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQH 155
Query: 117 LPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVP 152
L RL+G+ A + + T A G VN VP
Sbjct: 156 LTRLLGRGRALEAVLTSSDFDADLAERYGWVNRAVP 191
>pdb|3BPT|A Chain A, Crystal Structure Of Human Beta-Hydroxyisobutyryl-Coa
Hydrolase In Complex With Quercetin
Length = 363
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 5/156 (3%)
Query: 2 LRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVL-QMSPSEIHFYVNTLRSTFSF 60
+R + + +D +++I+ + K FCAG D++V+ + ++ R +
Sbjct: 35 IRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYXL 94
Query: 61 LEAL---PIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRL 117
A+ P +A+I R+ E L PET + + P GG L
Sbjct: 95 NNAVGSCQKPYVALIHGITXGGGVGLSVHGQFRVATEKCLFAXPETAIGLFPDVGGGYFL 154
Query: 118 PRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPA 153
PRL GK + + TG ++ G+D G+ ++V +
Sbjct: 155 PRLQGK-LGYFLALTGFRLKGRDVYRAGIATHFVDS 189
>pdb|3L3S|A Chain A, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|B Chain B, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|C Chain C, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|D Chain D, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|E Chain E, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|F Chain F, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|G Chain G, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|H Chain H, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|I Chain I, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|J Chain J, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|K Chain K, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|L Chain L, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
Length = 263
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 70/182 (38%), Gaps = 15/182 (8%)
Query: 5 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVL---QMSPSEIHFYVNTLRSTFSFL 61
L A D +V++I ++FCAG DLK + + P E +V L S L
Sbjct: 38 LHDALRRAXGDDHVHVLVIHGP-GRIFCAGHDLKEIGRHRADPDEGRAFVTDLFEACSAL 96
Query: 62 ----EALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLP---ETGLAIIPGAGGT 114
P PTIA+++ CDL AA LP G P
Sbjct: 97 XLDLAHCPKPTIALVEGIATAAGLQLXAACDLAYASPAARFCLPGVQNGGFXTTPAVA-- 154
Query: 115 QRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSV 174
+ R++G+ + TG A++ GL+N +P ++A + + Q+
Sbjct: 155 --VSRVIGRRAVTEXALTGATYDADWALAAGLINRILPEAALATHVADLAGALAARNQAP 212
Query: 175 FR 176
R
Sbjct: 213 LR 214
>pdb|4J2U|A Chain A, Crystal Structure Of An Enoyl-coa Hydratase From
Rhodobacter Sphaeroides 2.4.1
pdb|4J2U|B Chain B, Crystal Structure Of An Enoyl-coa Hydratase From
Rhodobacter Sphaeroides 2.4.1
Length = 365
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 6/143 (4%)
Query: 15 DSSANVVMIRSSVPKVFCAGADLKVLQMS--PSEIHFYVNTLRSTFSF---LEALPIPTI 69
D +V+I + P+ FCAG D+ L + F + R + + A P P +
Sbjct: 66 DPEVELVVIDAEGPRAFCAGGDIAELHGRGVAGDHAFGQDFWRVEYRXNDRIAAFPKPIV 125
Query: 70 AVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDI 129
++ RI GE + + PE + ++P GGT L R G+ + +
Sbjct: 126 SLXQGFTXGGGVGLGCHARHRIVGETSQISXPECAIGLVPDVGGTHLLARAPGR-IGVWL 184
Query: 130 IFTGRKVSGKDAMSLGLVNYYVP 152
TG + DA+ G + +VP
Sbjct: 185 GLTGARXGPGDAIFAGFADRFVP 207
>pdb|3PE8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 256
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 58/150 (38%), Gaps = 8/150 (5%)
Query: 30 VFCAGADLKVLQMSPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDL 89
VFCAG DLK L + L + P I I+ CD+
Sbjct: 65 VFCAGLDLKELGDT--------TELPDISPKWPDMTKPVIGAINGAAVTGGLELALYCDI 116
Query: 90 RICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNY 149
I E A + ++P G + RLP+ VG +A+ + TG +S +DA+ GLV
Sbjct: 117 LIASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLARRMSLTGDYLSAQDALRAGLVTE 176
Query: 150 YVPAGQAQLKALEIAQEINQKVQSVFRILL 179
V A +A I Q R LL
Sbjct: 177 VVAHDDLLTAARRVAASIVGNNQKAVRALL 206
>pdb|2GTR|A Chain A, Human Chromodomain Y-Like Protein
pdb|2GTR|B Chain B, Human Chromodomain Y-Like Protein
pdb|2GTR|C Chain C, Human Chromodomain Y-Like Protein
Length = 261
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 7/153 (4%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADL-----KVLQMSPSEIHFYVNTLR 55
++R ++ A T + D S V++ S+V VFC G D ++ E +R
Sbjct: 34 VMREVQSALSTAAADDSKLVLL--SAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEAIR 91
Query: 56 STFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQ 115
+ + P I ++ CD+ E A P T P T
Sbjct: 92 NFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTV 151
Query: 116 RLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVN 148
P+++G + A +++ +GRK++ ++A GLV+
Sbjct: 152 MFPKIMGGASANEMLLSGRKLTAQEACGKGLVS 184
>pdb|3QMJ|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 From
Mycobacterium Marinum
Length = 256
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 13/154 (8%)
Query: 7 HAFETISEDSSANVVMIRSSVPKV-----------FCAGADLKVLQMSPSEIHFYVNTL- 54
+AF D++A ++ + P+V F AG DL +Q ++ +F
Sbjct: 28 NAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQARITDPNFSEGKFG 87
Query: 55 -RSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGG 113
R L P P I ++ DL A L P T L + P A
Sbjct: 88 FRGLIKALAGFPKPLICAVNGLGVGIGATILGYADLAFMSSTARLKCPFTSLGVAPEAAS 147
Query: 114 TQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLV 147
+ LP+LVG+ A ++ + + ++A+ +GLV
Sbjct: 148 SYLLPQLVGRQNAAWLLMSSEWIDAEEALRMGLV 181
>pdb|3SLL|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|D Chain D, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|E Chain E, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|F Chain F, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 290
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 63/164 (38%), Gaps = 26/164 (15%)
Query: 5 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--------MSPSEIHFYVNTLRS 56
K IS D+ V+I + K FC+GAD K P+ + L
Sbjct: 56 FKQMLVDISHDNDVRAVVI-TGAGKGFCSGADQKSAGPIPHIGGLTQPTIALRSMELLDE 114
Query: 57 TFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAAL---------LGLPETGLAI 107
L + P IA I+ CD+R+ + A L E GL+
Sbjct: 115 VILTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSY 174
Query: 108 IPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYV 151
+ LPR +G S A DI+ TGR V +A +GLV+ V
Sbjct: 175 L--------LPRAIGTSRASDIMLTGRDVDADEAERIGLVSRKV 210
>pdb|3P5M|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
Length = 255
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 61/157 (38%), Gaps = 6/157 (3%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSF 60
ML L D S V++ + + FC+G DL + +
Sbjct: 34 MLEELSVHIRDAEADESVRAVLL-TGAGRAFCSGGDLTGGDTA-----GAADAANRVVRA 87
Query: 61 LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRL 120
+ +LP P IA + CDL + A+ L T + ++P G + LP L
Sbjct: 88 ITSLPKPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLL 147
Query: 121 VGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQ 157
+G++ + T K+S A G++++ A + +
Sbjct: 148 IGRARTSRMAMTAEKISAATAFEWGMISHITSADEYE 184
>pdb|2FBM|A Chain A, Acetyltransferase Domain Of Cdy1
pdb|2FBM|B Chain B, Acetyltransferase Domain Of Cdy1
pdb|2FBM|C Chain C, Acetyltransferase Domain Of Cdy1
Length = 291
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADL----KVLQMSPSEIHF-YVNTLR 55
+++ + +A + + D S V+ S+ VFC G D K L+ + + V+T++
Sbjct: 52 VIKEIVNALNSAAADDSKLVLF--SAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIK 109
Query: 56 STFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQ 115
+ + P + ++ CDL E A P T P +
Sbjct: 110 NFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSI 169
Query: 116 RLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVN 148
P+++GK+ A +++ GRK++ ++A + GLV+
Sbjct: 170 TFPKMMGKASANEMLIAGRKLTAREACAKGLVS 202
>pdb|4FZW|C Chain C, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
pdb|4FZW|D Chain D, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
Length = 274
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 14/152 (9%)
Query: 5 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSP---------SEIHFYVNTLR 55
L + + D + +++ + + FCAG DL + P S FY +R
Sbjct: 47 LAECLKQVERDDTIRCLLL-TGAGRGFCAGQDLNDRNVDPTGPAPDLGMSVERFYNPLVR 105
Query: 56 STFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQ 115
L LP P I ++ D+ I +A + + L +IP GGT
Sbjct: 106 R----LAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTW 161
Query: 116 RLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLV 147
LPR+ G++ A + G ++S + A G++
Sbjct: 162 LLPRVAGRARAMGLALLGNQLSAEQAHEWGMI 193
>pdb|3OC7|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase From
Mycobacterium Avium
Length = 267
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 70/178 (39%), Gaps = 17/178 (9%)
Query: 5 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQM--SPSEIH-FYVNTLRSTFSFL 61
L S D + VV++ + FCAGADL SPS + V R + +
Sbjct: 43 LHQGLRDASSDPAVRVVVL-AHTGGTFCAGADLSEAGSGGSPSSAYDMAVERAREMAALM 101
Query: 62 EAL---PIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLP 118
A+ +P IA ID CD+ + G + L E + + P LP
Sbjct: 102 RAIVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLP 161
Query: 119 RLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFR 176
+L ++ A+ TG K + A +GL+ + A ++ I+Q V V R
Sbjct: 162 KLSARAAAR-YYLTGEKFDARRAEEIGLIT---------MAAEDLDAAIDQLVTDVGR 209
>pdb|1Q51|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q52|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
Length = 314
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 75/195 (38%), Gaps = 19/195 (9%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPK----VFCAGADLKV-----LQMSPSEIHFYV 51
+ R L HA +S D ++ PK FC+G D ++ Q + + V
Sbjct: 69 LYRVLDHA--RMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTV 126
Query: 52 NTLRS-TFSFLEA------LPIPTIAVIDXXXXXXXXXXXXXCDLRICG-EAALLGLPET 103
+ R+ LE +P I +++ CDL + E A +
Sbjct: 127 DVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDA 186
Query: 104 GLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEI 163
+ G G+ L R VG+ A++I F GR + + +G VN + + L+
Sbjct: 187 DVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQW 246
Query: 164 AQEINQKVQSVFRIL 178
A EIN K R+L
Sbjct: 247 AAEINAKSPQAQRML 261
>pdb|1RJM|A Chain A, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJM|B Chain B, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJM|C Chain C, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJN|A Chain A, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
pdb|1RJN|B Chain B, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
pdb|1RJN|C Chain C, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
Length = 339
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 75/195 (38%), Gaps = 19/195 (9%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPK----VFCAGADLKV-----LQMSPSEIHFYV 51
+ R L HA +S D ++ PK FC+G D ++ Q + + V
Sbjct: 94 LYRVLDHA--RMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTV 151
Query: 52 NTLRS-TFSFLEA------LPIPTIAVIDXXXXXXXXXXXXXCDLRICG-EAALLGLPET 103
+ R+ LE +P I +++ CDL + E A +
Sbjct: 152 DVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDA 211
Query: 104 GLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEI 163
+ G G+ L R VG+ A++I F GR + + +G VN + + L+
Sbjct: 212 DVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQW 271
Query: 164 AQEINQKVQSVFRIL 178
A EIN K R+L
Sbjct: 272 AAEINAKSPQAQRML 286
>pdb|3T8A|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8A|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8A|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8B|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb With
Altered Hexameric Assembly
pdb|3T8B|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb With
Altered Hexameric Assembly
Length = 334
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 75/195 (38%), Gaps = 19/195 (9%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPK----VFCAGADLKV-----LQMSPSEIHFYV 51
+ R L HA +S D ++ PK FC+G D ++ Q + + V
Sbjct: 89 LYRVLDHA--RMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTV 146
Query: 52 NTLRS-TFSFLEA------LPIPTIAVIDXXXXXXXXXXXXXCDLRICG-EAALLGLPET 103
+ R+ LE +P I +++ CDL + E A +
Sbjct: 147 DVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDA 206
Query: 104 GLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEI 163
+ G G+ L R VG+ A++I F GR + + +G VN + + L+
Sbjct: 207 DVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQW 266
Query: 164 AQEINQKVQSVFRIL 178
A EIN K R+L
Sbjct: 267 AAEINAKSPQAQRML 281
>pdb|2FW2|A Chain A, Catalytic Domain Of Cdy
pdb|2FW2|B Chain B, Catalytic Domain Of Cdy
pdb|2FW2|C Chain C, Catalytic Domain Of Cdy
pdb|2FW2|D Chain D, Catalytic Domain Of Cdy
pdb|2FW2|E Chain E, Catalytic Domain Of Cdy
pdb|2FW2|F Chain F, Catalytic Domain Of Cdy
Length = 260
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 7/153 (4%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADL----KVLQMSPSEIHF-YVNTLR 55
+++ + +A + + D S V+ S+ VFC G D + L+ + V+T++
Sbjct: 33 VIKEMVNALNSAAADDSKLVLF--SAAGSVFCCGLDFGYFVRHLRNDRNTASLEMVDTIK 90
Query: 56 STFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQ 115
+ + P + ++ CDL E A P T P +
Sbjct: 91 NFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSI 150
Query: 116 RLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVN 148
P+++GK+ A +++ GRK++ ++A + GLV+
Sbjct: 151 TFPKMMGKASANEMLIAGRKLTAREACAKGLVS 183
>pdb|3QK8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
Length = 272
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 69/179 (38%), Gaps = 4/179 (2%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSF 60
M R L + I D VV++R K F +G +++ + + + +R
Sbjct: 41 MHRDLADVWPVIDRDPDVRVVLVRGE-GKAFSSGGSFELIDETIGDYEGRIRIMREARDL 99
Query: 61 ---LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRL 117
L L P ++ I D+ + A + T L + G
Sbjct: 100 VLNLVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIIDGHTKLGVAAGDHAAICW 159
Query: 118 PRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFR 176
P LVG + AK + T +SG++A +GLV+ V + A +A+ + Q Q+ R
Sbjct: 160 PLLVGMAKAKYYLLTCETLSGEEAERIGLVSTCVDDDEVLPTATRLAENLAQGAQNAIR 218
>pdb|1JXZ|A Chain A, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
pdb|1JXZ|B Chain B, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
pdb|1JXZ|C Chain C, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
Length = 269
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 7/166 (4%)
Query: 8 AFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPS----EIHFYVNTLRSTFSFLEA 63
A ED S VMI + FCAG L+ + + HF + L +
Sbjct: 38 ALNRAEEDDSVGAVMI-TGAEDAFCAGFYLREIPLDKGVAGVRDHFRIAALWWQQMIHKI 96
Query: 64 LPI--PTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLV 121
+ + P +A I+ D+ IC ++A + I + L R+V
Sbjct: 97 IRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIV 156
Query: 122 GKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEI 167
G A +++ T R + ++A GLV+ P + + A ++A+E+
Sbjct: 157 GMRRAMELMLTNRTLYPEEAKDWGLVSRVYPKDEFREVAWKVAREL 202
>pdb|1SZO|A Chain A, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|B Chain B, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|C Chain C, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|D Chain D, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|E Chain E, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|F Chain F, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|G Chain G, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|H Chain H, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|I Chain I, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|J Chain J, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|K Chain K, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|L Chain L, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
Length = 257
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 72/168 (42%), Gaps = 4/168 (2%)
Query: 5 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQM-SPSEIHFYVNTLRSTFSFLEA 63
L + F I+ D VV++ + P FC D + +P + + + + L +
Sbjct: 48 LAYCFHDIACDRENKVVILTGTGPS-FCNEIDFTSFNLGTPHDWDEIIFEGQRLLNNLLS 106
Query: 64 LPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALL-GLPETGLAIIPGAGGTQRLPRLVG 122
+ +P IA ++ D+ + E+A P I+PG G P ++G
Sbjct: 107 IEVPVIAAVNGPVTNAPEIPVM-SDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLG 165
Query: 123 KSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQK 170
+ + + TG+++ + A+ G VN + + +A E+A+ I +K
Sbjct: 166 SNRGRYFLLTGQELDARTALDYGAVNEVLSEQELLPRAWELARGIAEK 213
>pdb|1O8U|A Chain A, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
pdb|1O8U|B Chain B, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
pdb|1O8U|C Chain C, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
pdb|1O8U|D Chain D, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
pdb|1O8U|E Chain E, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
pdb|1O8U|F Chain F, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
Length = 257
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 72/168 (42%), Gaps = 4/168 (2%)
Query: 5 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQM-SPSEIHFYVNTLRSTFSFLEA 63
L + F I+ D VV++ + P FC D + +P + + + + L +
Sbjct: 48 LAYCFHDIACDRENKVVILTGTGPS-FCNEIDFTSFNLGTPHDWDEIIFEGQRLLNNLLS 106
Query: 64 LPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALL-GLPETGLAIIPGAGGTQRLPRLVG 122
+ +P IA ++ D+ + E+A P I+PG G P ++G
Sbjct: 107 IEVPVIAAVNGPVTNHPEIPVM-SDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLG 165
Query: 123 KSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQK 170
+ + + TG+++ + A+ G VN + + +A E+A+ I +K
Sbjct: 166 SNRGRYFLLTGQELDARTALDYGAVNEVLSEQELLPRAWELARGIAEK 213
>pdb|1NZY|A Chain A, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
pdb|1NZY|C Chain C, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
Length = 269
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 7/166 (4%)
Query: 8 AFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPS----EIHFYVNTLRSTFSFLEA 63
A ED S VMI + FCAG L+ + + HF + L +
Sbjct: 38 ALNRAEEDDSVGAVMI-TGAEDAFCAGFYLREIPLDKGVAGVRDHFRIAALWWHQMIHKI 96
Query: 64 LPI--PTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLV 121
+ + P +A I+ D+ IC ++A + I + L R+V
Sbjct: 97 IRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIV 156
Query: 122 GKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEI 167
G A +++ T R + ++A GLV+ P + + A ++A+E+
Sbjct: 157 GMRRAMELMLTNRTLYPEEAKDWGLVSRVYPKDEFREVAWKVAREL 202
>pdb|1NZY|B Chain B, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
Length = 269
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 7/166 (4%)
Query: 8 AFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPS----EIHFYVNTLRSTFSFLEA 63
A ED S VMI + FCAG L+ + + HF + L +
Sbjct: 38 ALNRAEEDDSVGAVMI-TGAEDAFCAGFYLREIPLDKGVAGVRDHFRIAALWWHQMIHKI 96
Query: 64 LPI--PTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLV 121
+ + P +A I+ D+ IC ++A + I + L R+V
Sbjct: 97 IRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIV 156
Query: 122 GKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEI 167
G A +++ T R + ++A GLV+ P + + A ++A+E+
Sbjct: 157 GMRRAMELMLTDRTLYPEEAKDWGLVSRVYPKDEFREVAWKVAREL 202
>pdb|2EJ5|A Chain A, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase
Subunit Ii) From Geobacillus Kaustophilus
pdb|2EJ5|B Chain B, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase
Subunit Ii) From Geobacillus Kaustophilus
Length = 257
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 9/134 (6%)
Query: 8 AFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFS----FLEA 63
A + D + V+I + + FCAG DL + +E + + LRS ++ L
Sbjct: 38 ALKQAGADPNVRCVVI-TGAGRAFCAGEDLSGV----TEEMDHGDVLRSRYAPMMKALHH 92
Query: 64 LPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGK 123
L P +A ++ CD R+ E A + ++P AG LPRLVG+
Sbjct: 93 LEKPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGR 152
Query: 124 SVAKDIIFTGRKVS 137
+ A ++ G KV+
Sbjct: 153 AKALELAVLGEKVT 166
>pdb|3M6M|A Chain A, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
pdb|3M6M|B Chain B, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
pdb|3M6M|C Chain C, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
pdb|3M6N|A Chain A, Crystal Structure Of Rpff
pdb|3M6N|B Chain B, Crystal Structure Of Rpff
pdb|3M6N|C Chain C, Crystal Structure Of Rpff
Length = 305
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 87 CDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGL 146
C I E ++GLPE + PG G + + + +A+ I+ G S + + +GL
Sbjct: 162 CHTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQRISAHLAQKIMLEGNLYSAEQLLGMGL 221
Query: 147 VNYYVPAGQA 156
V+ VP GQ
Sbjct: 222 VDRVVPRGQG 231
>pdb|3QRE|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase Echa12_1 From
Mycobacterium Marinum
Length = 298
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%)
Query: 60 FLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPR 119
F+ L P IA I+ CD+R A +I G + LPR
Sbjct: 125 FVTMLRKPVIAAINGPCVGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPR 184
Query: 120 LVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQ 169
L +VA D++ +GR ++A LGLV V Q +ALE A++I +
Sbjct: 185 LTSWAVALDLLLSGRTFLAEEAAQLGLVKEVVTPEQLMPRALEYAEDIAR 234
>pdb|3I47|A Chain A, Crystal Structure Of Putative Enoyl Coa HydrataseISOMERASE
(Crotonase) From Legionella Pneumophila Subsp.
Pneumophila Str. Philadelphia 1
Length = 268
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 12/159 (7%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPS-------EIHFYVNT 53
+L ++ ++ D++ V++++++ K F AGADL +Q + E +
Sbjct: 32 LLTEMRIRLDSAINDTNVRVIVLKAN-GKHFSAGADLTWMQSMANFTEEENLEDSLVLGN 90
Query: 54 LRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGG 113
L + S P PTIA++ CD+ I +A E L +IP A
Sbjct: 91 LMYSIS---QSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFSEVKLGLIP-AVI 146
Query: 114 TQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVP 152
+ + R +G+ AK + + A SL LV + VP
Sbjct: 147 SPYVVRAIGERAAKMLFMSAEVFDATRAYSLNLVQHCVP 185
>pdb|3SWX|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SWX|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SWX|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 265
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 4/94 (4%)
Query: 87 CDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGL 146
D+ I E A E I P G T R PR G A + T +A +G+
Sbjct: 124 ADIVIADETATFAQLEVNRGIYPFGGATIRFPRTAGWGNAMRWMLTADTFDAVEAHRIGI 183
Query: 147 VNYYVPAGQAQLKALEIAQEINQK----VQSVFR 176
V VP G+ A+ IAQ I ++ VQ+ R
Sbjct: 184 VQEIVPVGEHVDTAIAIAQTIARQAPLGVQATLR 217
>pdb|3FDU|A Chain A, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|B Chain B, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|C Chain C, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|D Chain D, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|E Chain E, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|F Chain F, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
Length = 266
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 87 CDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGL 146
DL AL +P L + P G +Q L + G A +++FT +K + + A+ GL
Sbjct: 121 ADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAGYHKAAELLFTAKKFNAETALQAGL 180
Query: 147 VNYYV 151
VN V
Sbjct: 181 VNEIV 185
>pdb|3Q1T|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
Length = 278
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 66/179 (36%), Gaps = 4/179 (2%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSF 60
M R L + I D + V++R K F +G ++ + + + +R
Sbjct: 47 MHRDLADIWPVIDRDPAVRAVLVRGE-GKAFSSGGSFDLIDETIGDYQGRIRIMREARDL 105
Query: 61 LEAL---PIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRL 117
+ + P ++ I D+ + G A L T L + G
Sbjct: 106 VHNMINCDTPVVSAIRGPAVGAGLVVALLADISVAGRTAKLIDGHTKLGVAAGDHAAICW 165
Query: 118 PRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFR 176
P LVG + AK + T + G++A +GLV+ V A IA ++ Q Q +
Sbjct: 166 PLLVGMAKAKYYLLTCETLLGEEAERIGLVSLCVDDDDVLSTAAGIAGKLAQGAQHAIQ 224
>pdb|3LKE|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
pdb|3LKE|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
pdb|3LKE|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
Length = 263
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 80/193 (41%), Gaps = 37/193 (19%)
Query: 13 SEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSE---------IHFYVNTLRSTFSFLEA 63
+ ++S + ++++S F +G L+ L + S+ +H + + F+
Sbjct: 44 NNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQSDVRLREVLHVLNHCVLEIFTS--- 100
Query: 64 LPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGK 123
P T+A+I+ CD RI A + I P G + LPR++G
Sbjct: 101 -PKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIGY 159
Query: 124 SVAKDIIFTGRKVSGKDAMSLGLV---------------NY-------YVPAGQAQLKAL 161
+++ G+ + ++A+ LGL+ NY YVPA A K L
Sbjct: 160 EQTMNLLLEGKLFTSEEALRLGLIQEICENKQELQERVKNYLKAVSEGYVPAIAATKKLL 219
Query: 162 --EIAQEINQKVQ 172
+ A+E+ Q+++
Sbjct: 220 KGKAAEELKQQLE 232
>pdb|3QXI|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
pdb|3QXI|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
pdb|3QXI|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
Length = 265
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 7/153 (4%)
Query: 3 RGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSFLE 62
R L A + + D+ +V ++ + FCAG DLK + V F E
Sbjct: 45 RALADAMDRLDADAGLSVGIL-TGAGGSFCAGMDLKAFARGEN-----VVVEGRGLGFTE 98
Query: 63 ALPI-PTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLV 121
P P IA ++ DL + + G+PE ++ G GG RLP +
Sbjct: 99 RPPAKPLIAAVEGYALAGGTELALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERI 158
Query: 122 GKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAG 154
++A ++ TG +S + A +LG+VN G
Sbjct: 159 PYAIAMELALTGDNLSAERAHALGMVNVLAEPG 191
>pdb|3TLF|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
Length = 274
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 75/182 (41%), Gaps = 16/182 (8%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSF 60
M+ L+ A+ D ++++ + + FC+GAD+K + I Y ST+
Sbjct: 39 MITELRAAYHEAENDDRVWLLVV-TGTGRAFCSGADVKEIPEDGKVI--YERPYLSTYDQ 95
Query: 61 LEA----------LPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPG 110
EA + P + ++ D+ I E A P + ++ G
Sbjct: 96 WEAPQEGTPPFRTMAKPVLTAVNGICCGAGMDWVTTTDIVIASEQATFFDPHVSIGLVAG 155
Query: 111 AGGTQRLPRLVGKSVAKDIIFTGR--KVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEIN 168
R+ R++ +S+A + G+ ++S + A LGL++ V + +A EIA +N
Sbjct: 156 R-ELVRVSRVLPRSIALRMALMGKHERMSAQRAYELGLISEIVEHDRLLERAHEIADIVN 214
Query: 169 QK 170
Sbjct: 215 SN 216
>pdb|2J5G|D Chain D, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
Length = 263
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 5/171 (2%)
Query: 3 RGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSF 60
R AF IS D VV++ S + A D L +P E +
Sbjct: 54 REFPDAFYDISRDRDNRVVILTGS-GDAWMAEIDFPSLGDVTNPREWDKTYWEGKKVLQN 112
Query: 61 LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALL-GLPETGLAIIPGAGGTQRLPR 119
L + +P I+ ++ D+ + E + +P I+PG G P
Sbjct: 113 LLDIEVPVISAVNGAALLHSEYILT-TDIILASENTVFQDMPHLNAGIVPGDGVHILWPL 171
Query: 120 LVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQK 170
+G + +FT K++ + A L +V+ +P + +A EIA+ + ++
Sbjct: 172 ALGLYRGRYFLFTQEKLTAQQAYELNVVHEVLPQSKLMERAWEIARTLAKQ 222
>pdb|2J5G|A Chain A, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|B Chain B, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|C Chain C, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|E Chain E, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|F Chain F, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|G Chain G, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|H Chain H, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|I Chain I, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|J Chain J, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|K Chain K, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|L Chain L, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5S|A Chain A, Structural Of Abdh, A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120 Bound To (S)-3-
Oxocyclohexyl Acetic Acid
pdb|2J5S|B Chain B, Structural Of Abdh, A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120 Bound To (S)-3-
Oxocyclohexyl Acetic Acid
Length = 263
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 5/171 (2%)
Query: 3 RGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSF 60
R AF IS D VV++ S + A D L +P E +
Sbjct: 54 REFPDAFYDISRDRDNRVVILTGS-GDAWMAEIDFPSLGDVTNPREWDKTYWEGKKVLQN 112
Query: 61 LEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALL-GLPETGLAIIPGAGGTQRLPR 119
L + +P I+ ++ D+ + E + +P I+PG G P
Sbjct: 113 LLDIEVPVISAVNGAALLHSEYILT-TDIILASENTVFQDMPHLNAGIVPGDGVHILWPL 171
Query: 120 LVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQK 170
+G + +FT K++ + A L +V+ +P + +A EIA+ + ++
Sbjct: 172 ALGLYRGRYFLFTQEKLTAQQAYELNVVHEVLPQSKLMERAWEIARTLAKQ 222
>pdb|3JU1|A Chain A, Crystal Structure Of Enoyl-Coa HydrataseISOMERASE FAMILY
PROTEIN
pdb|3JU1|B Chain B, Crystal Structure Of Enoyl-Coa HydrataseISOMERASE FAMILY
PROTEIN
Length = 407
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 57/147 (38%), Gaps = 11/147 (7%)
Query: 21 VMIRSSVPKVFCAGADLKVL---------QMSPSEIHFYVNTLRSTFSFLEALPIPTIAV 71
V++ S K FCAG D++ L Q++ F+ R + L P +
Sbjct: 90 VVLDGSGEKAFCAGGDVRALYHASVAAKGQVTEVAKVFFEEEYRLDY-LLHTYGKPVLVW 148
Query: 72 IDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIF 131
D ++ E + + PE + + P GG+ L R GK +
Sbjct: 149 GDGIVXGGGLGLXAGASHKVVTETSRIAXPEVTIGLYPDVGGSYFLNRXPGKX-GLFLGL 207
Query: 132 TGRKVSGKDAMSLGLVNYYVPAGQAQL 158
T + DA +GL ++Y+ +L
Sbjct: 208 TAYHXNAADACYVGLADHYLNRDDKEL 234
>pdb|3LAO|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Pseudomonas
Aeruginosa Pa01
pdb|3LAO|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Pseudomonas
Aeruginosa Pa01
pdb|3LAO|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Pseudomonas
Aeruginosa Pa01
Length = 258
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 32/73 (43%)
Query: 107 IIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQE 166
I P G T R PR G + A I TG + +A+ L+ V G+ +ALE A+
Sbjct: 147 IPPLGGSTVRFPRAAGWTDAXRYILTGDEFDADEALRXRLLTEVVEPGEELARALEYAER 206
Query: 167 INQKVQSVFRILL 179
I + R L
Sbjct: 207 IARAAPLAVRAAL 219
>pdb|2GQF|A Chain A, Crystal Structure Of Flavoprotein Hi0933 From Haemophilus
Influenzae Rd
Length = 401
Score = 33.1 bits (74), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 120 LVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKAL---EIAQEINQKVQS 173
L GKS ++FT R +SG + + NY+ P ++ L + +EINQ QS
Sbjct: 223 LCGKSFYNQLLFTHRGISGPAVLQIS--NYWQPTESVEIDLLPNHNVEEEINQAKQS 277
>pdb|2Q35|A Chain A, Crystal Structure Of The Y82f Variant Of Ech2
Decarboxylase Domain Of Curf From Lyngbya Majuscula
Length = 243
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 70/188 (37%), Gaps = 27/188 (14%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSF 60
++ GL+H F ++++ VV++ + F +GA + L +R T
Sbjct: 31 IVEGLRHCFSVVAQNQQYKVVIL-TGYGNYFSSGASKEFL-------------IRKTRGE 76
Query: 61 LEAL---------PIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGA 111
+E L IP IA + D + + ++ P
Sbjct: 77 VEVLDLSGLILDCEIPIIAAMQGHSFGGGLLLGLYADFVVFSQESVYATNFMKYGFTPVG 136
Query: 112 GGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKV 171
+ L +G +A+++I+TG GK+ G+ P Q L AQ++ QK+
Sbjct: 137 ATSLILREKLGSELAQEMIYTGENYRGKELAERGIP---FPVVSRQ-DVLNYAQQLGQKI 192
Query: 172 QSVFRILL 179
R+ L
Sbjct: 193 AKSPRLSL 200
>pdb|1WZ8|A Chain A, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
pdb|1WZ8|B Chain B, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
pdb|1WZ8|C Chain C, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
pdb|1WZ8|D Chain D, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
pdb|1WZ8|E Chain E, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
pdb|1WZ8|F Chain F, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
Length = 264
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 118 PRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQ 169
P LVG + AK + ++G++A LGLV V + KALE+A+ + Q
Sbjct: 157 PLLVGMAKAKYHLLLNEPLTGEEAERLGLVALAVEDEKVYEKALEVAERLAQ 208
>pdb|1YOV|A Chain A, Insights Into The Ubiquitin Transfer Cascade From The
Refined Structure Of The Activating Enzyme For Nedd8
pdb|1YOV|C Chain C, Insights Into The Ubiquitin Transfer Cascade From The
Refined Structure Of The Activating Enzyme For Nedd8
Length = 537
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Query: 89 LRICGEAALLGLPETGLAIIPG-AGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLV 147
LR+ G+ L + +I A GT+ L LV + I G +VSG+DA + +
Sbjct: 20 LRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFL 79
Query: 148 NYYVPAGQAQLKALEIAQEINQKVQSVF 175
A+E QE+N V F
Sbjct: 80 QRSSIGKNRAEAAMEFLQELNSDVSGSF 107
>pdb|1TT5|A Chain A, Structure Of Appbp1-Uba3-Ubc12n26: A Unique E1-E2
Interaction Required For Optimal Conjugation Of The
Ubiquitin-Like Protein Nedd8
pdb|1TT5|C Chain C, Structure Of Appbp1-Uba3-Ubc12n26: A Unique E1-E2
Interaction Required For Optimal Conjugation Of The
Ubiquitin-Like Protein Nedd8
pdb|3DBH|A Chain A, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190ala-Nedd8ala72arg)
pdb|3DBH|C Chain C, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190ala-Nedd8ala72arg)
pdb|3DBH|E Chain E, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190ala-Nedd8ala72arg)
pdb|3DBH|G Chain G, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190ala-Nedd8ala72arg)
pdb|3DBL|A Chain A, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190wt-Nedd8ala72gln)
pdb|3DBL|C Chain C, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190wt-Nedd8ala72gln)
pdb|3DBL|E Chain E, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190wt-Nedd8ala72gln)
pdb|3DBL|G Chain G, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190wt-Nedd8ala72gln)
pdb|3DBR|A Chain A, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190gln-Nedd8ala72arg)
pdb|3DBR|C Chain C, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190gln-Nedd8ala72arg)
pdb|3DBR|E Chain E, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190gln-Nedd8ala72arg)
pdb|3DBR|G Chain G, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190gln-Nedd8ala72arg)
Length = 531
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Query: 89 LRICGEAALLGLPETGLAIIPG-AGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLV 147
LR+ G+ L + +I A GT+ L LV + I G +VSG+DA + +
Sbjct: 19 LRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFL 78
Query: 148 NYYVPAGQAQLKALEIAQEINQKVQSVF 175
A+E QE+N V F
Sbjct: 79 QRSSIGKNRAEAAMEFLQELNSDVSGSF 106
>pdb|1R4M|A Chain A, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
pdb|1R4M|C Chain C, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
pdb|1R4M|E Chain E, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
pdb|1R4M|G Chain G, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
pdb|1R4N|A Chain A, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
With Atp
pdb|1R4N|C Chain C, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
With Atp
pdb|1R4N|E Chain E, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
With Atp
pdb|1R4N|G Chain G, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
With Atp
Length = 529
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Query: 89 LRICGEAALLGLPETGLAIIPG-AGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLV 147
LR+ G+ L + +I A GT+ L LV + I G +VSG+DA + +
Sbjct: 17 LRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFL 76
Query: 148 NYYVPAGQAQLKALEIAQEINQKVQSVF 175
A+E QE+N V F
Sbjct: 77 QRSSIGKNRAEAAMEFLQELNSDVSGSF 104
>pdb|3GZN|A Chain A, Structure Of Nedd8-Activating Enzyme In Complex With Nedd8
And Mln4924
pdb|3GZN|C Chain C, Structure Of Nedd8-Activating Enzyme In Complex With Nedd8
And Mln4924
Length = 534
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Query: 89 LRICGEAALLGLPETGLAIIPG-AGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLV 147
LR+ G+ L + +I A GT+ L LV + I G +VSG+DA + +
Sbjct: 17 LRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFL 76
Query: 148 NYYVPAGQAQLKALEIAQEINQKVQSVF 175
A+E QE+N V F
Sbjct: 77 QRSSIGKNRAEAAMEFLQELNSDVSGSF 104
>pdb|2NVU|A Chain A, Structure Of Appbp1-Uba3~nedd8-Nedd8-Mgatp-Ubc12(C111a), A
Trapped Ubiquitin-Like Protein Activation Complex
Length = 536
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Query: 89 LRICGEAALLGLPETGLAIIPG-AGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLV 147
LR+ G+ L + +I A GT+ L LV + I G +VSG+DA + +
Sbjct: 19 LRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFL 78
Query: 148 NYYVPAGQAQLKALEIAQEINQKVQSVF 175
A+E QE+N V F
Sbjct: 79 QRSSIGKNRAEAAMEFLQELNSDVSGSF 106
>pdb|2Q2X|A Chain A, Crystal Structure Of The Ech2 Decarboxylase Domain Of Curf
From Lyngbya Majuscula
pdb|2Q34|A Chain A, Crystal Structure Of The Ech2 Decarboxylase Domain Of Curf
From Lyngbya Majuscula, Rhombohedral Crystal Form
Length = 243
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 68/188 (36%), Gaps = 27/188 (14%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHFYVNTLRSTFSF 60
++ GL+H F ++++ VV++ + F +GA + L +R T
Sbjct: 31 IVEGLRHCFSVVAQNQQYKVVIL-TGYGNYFSSGASKEYL-------------IRKTRGE 76
Query: 61 LEAL---------PIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGA 111
+E L IP IA D + + ++ P
Sbjct: 77 VEVLDLSGLILDCEIPIIAAXQGHSFGGGLLLGLYADFVVFSQESVYATNFXKYGFTPVG 136
Query: 112 GGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKV 171
+ L +G +A++ I+TG GK+ G+ P Q L AQ++ QK+
Sbjct: 137 ATSLILREKLGSELAQEXIYTGENYRGKELAERGIP---FPVVSRQ-DVLNYAQQLGQKI 192
Query: 172 QSVFRILL 179
R+ L
Sbjct: 193 AKSPRLSL 200
>pdb|3HP0|A Chain A, Crystal Structure Of A Putative Polyketide Biosynthesis
Enoyl-Coa Hydratase (Pksh) From Bacillus Subtilis
pdb|3HP0|B Chain B, Crystal Structure Of A Putative Polyketide Biosynthesis
Enoyl-Coa Hydratase (Pksh) From Bacillus Subtilis
pdb|3HP0|C Chain C, Crystal Structure Of A Putative Polyketide Biosynthesis
Enoyl-Coa Hydratase (Pksh) From Bacillus Subtilis
pdb|3HP0|D Chain D, Crystal Structure Of A Putative Polyketide Biosynthesis
Enoyl-Coa Hydratase (Pksh) From Bacillus Subtilis
pdb|3HP0|E Chain E, Crystal Structure Of A Putative Polyketide Biosynthesis
Enoyl-Coa Hydratase (Pksh) From Bacillus Subtilis
pdb|3HP0|F Chain F, Crystal Structure Of A Putative Polyketide Biosynthesis
Enoyl-Coa Hydratase (Pksh) From Bacillus Subtilis
Length = 267
Score = 30.0 bits (66), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 56/148 (37%), Gaps = 22/148 (14%)
Query: 15 DSSANVVMIRSSVPKVFCAGADLKVL---------QMSPSEIHFYVNTLRSTFSFLEALP 65
++S V++ +P+VFC GAD + + Q S E L + L+ P
Sbjct: 47 ETSTVTVVVLEGLPEVFCFGADFQEIYQEXKRGRKQASSQE------PLYDLWXKLQTGP 100
Query: 66 IPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLP---RLVG 122
TI+ + D+ I + A L E + P LP R +G
Sbjct: 101 YVTISHVRGKVNAGGLGFVSATDIAIADQTASFSLSELLFGLYPAC----VLPFLIRRIG 156
Query: 123 KSVAKDIIFTGRKVSGKDAMSLGLVNYY 150
+ A + +S ++A GL++ +
Sbjct: 157 RQKAHYXTLXTKPISVQEASEWGLIDAF 184
>pdb|2W3P|A Chain A, Boxc Crystal Structure
pdb|2W3P|B Chain B, Boxc Crystal Structure
Length = 556
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 24/179 (13%)
Query: 14 EDSSANVVMIRSSVPKVFCAGADLKVLQMSPS--EIHF--YVNTLR------STFSFLEA 63
E V++ S +VFC+GA++ +L +S +++F + N R S S L+
Sbjct: 73 EHPEVRTVVLTSLKDRVFCSGANIFMLGLSTHAWKVNFCKFTNETRNGLEDSSRHSGLKF 132
Query: 64 LPIPTIAVIDXXXXXXXXXXXXXCD--LRICGEAALLGLPETG-LAIIPGAGGTQRL--P 118
L A ++ CD + ++ + LPE L ++PG GG R+
Sbjct: 133 L-----AAVNGACAGGGYELALACDEIYLVDDRSSSVSLPEVPLLGVLPGTGGLTRVTDK 187
Query: 119 RLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQ----AQLKALEIAQEINQKVQS 173
R V A V G+ A + LV+ V Q Q +ALE+A + ++ +
Sbjct: 188 RKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPNQFDQAIQARALELAAQSDRPAHA 246
>pdb|2F6Q|A Chain A, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
pdb|2F6Q|B Chain B, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
pdb|2F6Q|C Chain C, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
Length = 280
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 35/94 (37%)
Query: 64 LPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGK 123
P P IAV++ D + A P + L P + P++
Sbjct: 120 FPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIXSP 179
Query: 124 SVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQ 157
+ A + + G+K++ +A + GLV P Q
Sbjct: 180 AKATEXLIFGKKLTAGEACAQGLVTEVFPDSTFQ 213
>pdb|3G64|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Streptomyces Coelicolor A3(2)
pdb|3G64|B Chain B, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Streptomyces Coelicolor A3(2)
pdb|3G64|C Chain C, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Streptomyces Coelicolor A3(2)
Length = 279
Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 117 LPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEI 167
LPR+VG A ++ G V +A +GL++ G+A A +A+ +
Sbjct: 166 LPRVVGLGHATRLLXLGDTVRAPEAERIGLISELTEEGRADEAARTLARRL 216
>pdb|1L9Y|A Chain A, Fez-1-Y228a, A Mutant Of The Metallo-Beta-Lactamase From
Legionella Gormanii
pdb|1L9Y|B Chain B, Fez-1-Y228a, A Mutant Of The Metallo-Beta-Lactamase From
Legionella Gormanii
Length = 263
Score = 26.6 bits (57), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 12 ISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHF 49
I+ D ANV MI++S+ K+ +D K+L + S HF
Sbjct: 39 INSDLEANVPMIKASIKKLGFKFSDTKILLI--SHAHF 74
>pdb|1JT1|A Chain A, Fez-1 Metallo-Beta-Lactamase From Legionella Gormanii
Modelled With D- Captopril
pdb|1K07|A Chain A, Native Fez-1 Metallo-beta-lactamase From Legionella
Gormanii
pdb|1K07|B Chain B, Native Fez-1 Metallo-beta-lactamase From Legionella
Gormanii
Length = 263
Score = 26.6 bits (57), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 12 ISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPSEIHF 49
I+ D ANV MI++S+ K+ +D K+L + S HF
Sbjct: 39 INSDLEANVPMIKASIKKLGFKFSDTKILLI--SHAHF 74
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,296,726
Number of Sequences: 62578
Number of extensions: 151605
Number of successful extensions: 486
Number of sequences better than 100.0: 113
Number of HSP's better than 100.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 346
Number of HSP's gapped (non-prelim): 113
length of query: 179
length of database: 14,973,337
effective HSP length: 93
effective length of query: 86
effective length of database: 9,153,583
effective search space: 787208138
effective search space used: 787208138
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (23.1 bits)