BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030339
(179 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54HG7|AUHM_DICDI Methylglutaconyl-CoA hydratase, mitochondrial OS=Dictyostelium
discoideum GN=auh PE=3 SV=1
Length = 303
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/149 (56%), Positives = 110/149 (73%), Gaps = 1/149 (0%)
Query: 20 VVMIRSSVPKVFCAGADLKVLQ-MSPSEIHFYVNTLRSTFSFLEALPIPTIAVIDGAALG 78
VV++RS V VFC+GADLK MS E +V++LRS+F+ LE L +PTIA I+G A+G
Sbjct: 94 VVIVRSLVDGVFCSGADLKERALMSQVEASQFVHSLRSSFTELETLQMPTIAAIEGVAVG 153
Query: 79 GGLEMALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSG 138
GG EM LACD R+ +++ +GLPETGLAIIPGAGGTQRLPRL+G AK++IFTG +
Sbjct: 154 GGTEMVLACDFRVASKSSKMGLPETGLAIIPGAGGTQRLPRLIGIPRAKELIFTGAILDS 213
Query: 139 KDAMSLGLVNYYVPAGQAQLKALEIAQEI 167
K A+ +GLV Y G+A KA+EIA++I
Sbjct: 214 KRALEIGLVQYETEKGEAFDKAIEIAKQI 242
>sp|Q3TLP5|ECHD2_MOUSE Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Mus musculus GN=Echdc2 PE=2 SV=2
Length = 296
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 114/168 (67%), Gaps = 5/168 (2%)
Query: 5 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVL-QMSPSEIHFYVNTLRSTFSFLEA 63
L A + ED V++ RS+V VFCAGADLK QMS E+ +V LR S + A
Sbjct: 68 LLEALAQLREDQQVRVLLFRSAVKGVFCAGADLKEREQMSDVEVGTFVQRLRGLMSEIAA 127
Query: 64 LPIPTIAVIDGAALGGGLEMALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGK 123
P+PTIA +DG ALGGGLE+ALACDLRI +A++GL ET ++PGAGGTQRLPR +G
Sbjct: 128 FPVPTIAAMDGFALGGGLELALACDLRIAASSAVMGLIETTRGLLPGAGGTQRLPRCLGV 187
Query: 124 SVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQ----AQLKALEIAQEI 167
++AK++IFTGR+++G A LGLVN+ V + A +AL +AQEI
Sbjct: 188 ALAKELIFTGRRLNGAQARELGLVNHAVAQNEEGNAAYHRALALAQEI 235
>sp|O34893|YNGF_BACSU Putative enoyl-CoA hydratase/isomerase YngF OS=Bacillus subtilis
(strain 168) GN=yngF PE=3 SV=1
Length = 260
Score = 161 bits (408), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 117/169 (69%), Gaps = 1/169 (0%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKV-LQMSPSEIHFYVNTLRSTFS 59
MLR L+ + I +S+ V++ + K FCAGADLK +++ ++ V+ ++ T +
Sbjct: 32 MLRNLQMIIQEIEFNSNIRCVILTGTGEKAFCAGADLKERIKLKEDQVLESVSLIQRTAA 91
Query: 60 FLEALPIPTIAVIDGAALGGGLEMALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPR 119
L+ALP P IA I+G+ALGGGLE+ALACDLRI EAA+LGLPETGLAIIPGAGGTQRLPR
Sbjct: 92 LLDALPQPVIAAINGSALGGGLELALACDLRIATEAAVLGLPETGLAIIPGAGGTQRLPR 151
Query: 120 LVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEIN 168
L+G+ AK+ I+TGR+V+ +A +GLV + KA E+A I+
Sbjct: 152 LIGRGKAKEFIYTGRRVTAHEAKEIGLVEHVTAPCDLMPKAEELAAAIS 200
>sp|Q2TBT3|ECHD2_BOVIN Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Bos taurus GN=ECHDC2 PE=2 SV=1
Length = 296
Score = 159 bits (402), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 113/168 (67%), Gaps = 5/168 (2%)
Query: 5 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVL-QMSPSEIHFYVNTLRSTFSFLEA 63
L A + ED V++ RS V VFCAGADLK QMS +E+ +V LR + + A
Sbjct: 68 LLEALAQLREDRQVRVLIFRSGVKGVFCAGADLKEREQMSEAEVGLFVQRLRGLMTEIAA 127
Query: 64 LPIPTIAVIDGAALGGGLEMALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGK 123
P PTIA +DG ALGGGLE+ALACDLR+ +A++GL ET ++PGAGGTQRLPR +G
Sbjct: 128 FPAPTIAAMDGFALGGGLELALACDLRVAASSAVMGLIETTRGLLPGAGGTQRLPRCLGV 187
Query: 124 SVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQ----AQLKALEIAQEI 167
++AK++IFTGR++SG A +LGLVN+ V + A +A +AQEI
Sbjct: 188 ALAKELIFTGRRLSGAQAQALGLVNHAVAQNEEGNAAYHRARALAQEI 235
>sp|Q86YB7|ECHD2_HUMAN Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Homo sapiens GN=ECHDC2 PE=2 SV=2
Length = 292
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 112/168 (66%), Gaps = 5/168 (2%)
Query: 5 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVL-QMSPSEIHFYVNTLRSTFSFLEA 63
L + ED V++ RS V VFCAGADLK QMS +E+ +V LR + + A
Sbjct: 64 LLETLAQLREDRQVRVLLFRSGVKGVFCAGADLKEREQMSEAEVGVFVQRLRGLMNDIAA 123
Query: 64 LPIPTIAVIDGAALGGGLEMALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGK 123
P PTIA +DG ALGGGLE+ALACDLR+ +A++GL ET ++PGAGGTQRLPR +G
Sbjct: 124 FPAPTIAAMDGFALGGGLELALACDLRVAASSAVMGLIETTRGLLPGAGGTQRLPRCLGV 183
Query: 124 SVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQ----AQLKALEIAQEI 167
++AK++IFTGR++SG +A LGLVN+ V + A +A +AQEI
Sbjct: 184 ALAKELIFTGRRLSGTEAHVLGLVNHAVAQNEEGDAAYQRARALAQEI 231
>sp|A4YI89|HPCD_METS5 3-hydroxypropionyl-coenzyme A dehydratase OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=Msed_2001 PE=1 SV=1
Length = 259
Score = 139 bits (350), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 104/171 (60%), Gaps = 2/171 (1%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVL-QMSPSEIHFYVNTLRSTFS 59
+L L A D V++I + K FCAGAD+ Q++P+E + R
Sbjct: 32 LLEELDRAVSQAESDPEIRVIII-TGKGKAFCAGADITQFNQLTPAEAWKFSKKGREIMD 90
Query: 60 FLEALPIPTIAVIDGAALGGGLEMALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPR 119
+EAL PTIA+I+G ALGGGLE+ALACD+RI E A LGLPE L I PG GGTQRL R
Sbjct: 91 KIEALSKPTIAMINGYALGGGLELALACDIRIAAEEAQLGLPEINLGIYPGYGGTQRLTR 150
Query: 120 LVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQK 170
++GK A +++ TG ++ GKDA GLVN VP + + ++A++I +K
Sbjct: 151 VIGKGRALEMMMTGDRIPGKDAEKYGLVNRVVPLANLEQETRKLAEKIAKK 201
>sp|Q13825|AUHM_HUMAN Methylglutaconyl-CoA hydratase, mitochondrial OS=Homo sapiens
GN=AUH PE=1 SV=1
Length = 339
Score = 136 bits (343), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/171 (47%), Positives = 120/171 (70%), Gaps = 5/171 (2%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLK-VLQMSPSEIHFYVNTLRSTFS 59
+++ L A + + D ++IRS VP +FCAGADLK +MS SE+ +V+ +R+ +
Sbjct: 107 LIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVIN 166
Query: 60 FLEALPIPTIAVIDGAALGGGLEMALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPR 119
+ LP+PTIA IDG ALGGGLE+ALACD+R+ +A +GL ET LAIIPG GGTQRLPR
Sbjct: 167 DIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPR 226
Query: 120 LVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQ----AQLKALEIAQE 166
+G S+AK++IF+ R + GK+A ++GL+++ + Q A KAL++A+E
Sbjct: 227 AIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLARE 277
>sp|Q9JLZ3|AUHM_MOUSE Methylglutaconyl-CoA hydratase, mitochondrial OS=Mus musculus
GN=Auh PE=2 SV=1
Length = 314
Score = 136 bits (343), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/171 (47%), Positives = 119/171 (69%), Gaps = 5/171 (2%)
Query: 1 MLRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLK-VLQMSPSEIHFYVNTLRSTFS 59
+L+ L A + + D ++IRS VP +FCAGADLK +M SE+ +V+ +RS +
Sbjct: 82 LLKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMHSSEVGPFVSKIRSVIN 141
Query: 60 FLEALPIPTIAVIDGAALGGGLEMALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPR 119
+ LP+PTIA IDG ALGGGLE+ALACD+R+ +A +GL ET LAIIPG GGTQRLPR
Sbjct: 142 DIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPR 201
Query: 120 LVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQ----AQLKALEIAQE 166
+G S+AK++IF+ R + G++A ++GL+++ + Q A KAL++A+E
Sbjct: 202 AIGMSLAKELIFSARVLDGQEAKAVGLISHVLEQNQEGDAAYRKALDLARE 252
>sp|C6DAL7|FADJ_PECCP Fatty acid oxidation complex subunit alpha OS=Pectobacterium
carotovorum subsp. carotovorum (strain PC1) GN=fadJ PE=3
SV=1
Length = 727
Score = 123 bits (308), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 89/148 (60%), Gaps = 4/148 (2%)
Query: 9 FETISEDSSANVVMIRSSVPKVFCAGADLKVLQM--SPSEIHFYVNTLRSTFSFLEALPI 66
FE + ++ +++ SS P F AGAD+ +L S + + TF + ALP
Sbjct: 53 FEQARQHATLRGLILISSKPDSFIAGADITMLNQCRSAEQAENLAKQGQETFEQIAALPF 112
Query: 67 PTIAVIDGAALGGGLEMALACDLRICG--EAALLGLPETGLAIIPGAGGTQRLPRLVGKS 124
P +A I GA LGGGLE+ALACD R+C E +LGLPE L ++PG+GGTQRLPRL+G
Sbjct: 113 PVVAAIHGACLGGGLELALACDYRVCSLDEKTVLGLPEVQLGLLPGSGGTQRLPRLIGLD 172
Query: 125 VAKDIIFTGRKVSGKDAMSLGLVNYYVP 152
A D+I TGR + A+ GLV+ VP
Sbjct: 173 SALDLILTGRHLRANQALRQGLVDEAVP 200
>sp|Q6D2L7|FADJ_ERWCT Fatty acid oxidation complex subunit alpha OS=Erwinia carotovora
subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672)
GN=fadJ PE=3 SV=1
Length = 731
Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 96/166 (57%), Gaps = 4/166 (2%)
Query: 9 FETISEDSSANVVMIRSSVPKVFCAGADLKVLQM--SPSEIHFYVNTLRSTFSFLEALPI 66
FE + ++ ++ S+ P F AGAD+ +L S + + TF + ALP
Sbjct: 57 FELARQHATLRGLIFISAKPDSFIAGADITMLNKCSSAEQAENLAKQGQETFDQIAALPF 116
Query: 67 PTIAVIDGAALGGGLEMALACDLRICG--EAALLGLPETGLAIIPGAGGTQRLPRLVGKS 124
P +A I GA LGGGLE+ALACD R+C E +LGLPE L ++PG+GGTQRLPRL+G
Sbjct: 117 PVVAAIHGACLGGGLELALACDYRVCSLDEKTVLGLPEVQLGLLPGSGGTQRLPRLIGLD 176
Query: 125 VAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQK 170
A D+I TGR + A+ GLV+ VP A+EI ++ +K
Sbjct: 177 SALDLILTGRHLRAGQALRQGLVDEAVPHDILLDTAVEILKKGKRK 222
>sp|A8ADP2|FADJ_CITK8 Fatty acid oxidation complex subunit alpha OS=Citrobacter koseri
(strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fadJ
PE=3 SV=1
Length = 715
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 92/148 (62%), Gaps = 4/148 (2%)
Query: 9 FETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPI 66
+ I E+ + V+ S+ P F AGAD+ ++ S E + + ++AL +
Sbjct: 43 LKQIRENKALRGVVFISAKPDNFIAGADINMIGNCKSAQEAETLARQGQQIMAEIQALSV 102
Query: 67 PTIAVIDGAALGGGLEMALACDLRICGEAA--LLGLPETGLAIIPGAGGTQRLPRLVGKS 124
P +A I GA LGGGLEMALAC RIC + A +LGLPE L ++PG+GGTQRLPRLVG S
Sbjct: 103 PVVAAIHGACLGGGLEMALACHRRICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVS 162
Query: 125 VAKDIIFTGRKVSGKDAMSLGLVNYYVP 152
A D+I TG+++ K A+ +GLV+ VP
Sbjct: 163 TALDMILTGKQLRPKQALRVGLVDEVVP 190
>sp|A7MS61|FADJ_VIBHB Fatty acid oxidation complex subunit alpha OS=Vibrio harveyi
(strain ATCC BAA-1116 / BB120) GN=fadJ PE=3 SV=1
Length = 704
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 91/152 (59%), Gaps = 4/152 (2%)
Query: 5 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLE 62
+K F + + S ++I S P F AGAD+++L+ + SE + F L
Sbjct: 39 MKEIFAQLKDTSGVKGMVIHSLKPDNFVAGADVRMLEACTTASEAEALAKQGQELFQQLS 98
Query: 63 ALPIPTIAVIDGAALGGGLEMALACDLRICGEA--ALLGLPETGLAIIPGAGGTQRLPRL 120
LP P +A I G LGGGLE+ALACD R+C ++ LGLPE L ++PG+GGTQRLPRL
Sbjct: 99 DLPYPVVAAIHGPCLGGGLELALACDYRVCTDSDKTRLGLPEVQLGLLPGSGGTQRLPRL 158
Query: 121 VGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVP 152
+G + D+I TG+++ K A LG+V+ VP
Sbjct: 159 IGLLPSLDLILTGKQLRAKKAKKLGVVDACVP 190
>sp|Q8ZNA7|FADJ_SALTY Fatty acid oxidation complex subunit alpha OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=fadJ PE=3 SV=1
Length = 715
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 8/174 (4%)
Query: 9 FETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPI 66
+ I E+ + V+ S+ F AGAD+ ++ + E + + ++ALP+
Sbjct: 43 LKQIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPV 102
Query: 67 PTIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKS 124
P IA I GA LGGGLEMALAC RIC + +LGLPE L ++PG+GGTQRLPRLVG S
Sbjct: 103 PVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVS 162
Query: 125 VAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
A D+I TG+++ + A+ GLV+ VP Q LE A E+ +K + R L
Sbjct: 163 TALDMILTGKQLRARQALKAGLVDDVVP----QTILLEAAVELAKKERLAQRTL 212
>sp|B4SZR0|FADJ_SALNS Fatty acid oxidation complex subunit alpha OS=Salmonella newport
(strain SL254) GN=fadJ PE=3 SV=1
Length = 715
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 8/174 (4%)
Query: 9 FETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPI 66
+ I E+ + V+ S+ F AGAD+ ++ + E + + ++ALP+
Sbjct: 43 LKQIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPV 102
Query: 67 PTIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKS 124
P IA I GA LGGGLEMALAC RIC + +LGLPE L ++PG+GGTQRLPRLVG S
Sbjct: 103 PVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVS 162
Query: 125 VAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
A D+I TG+++ + A+ GLV+ VP Q LE A E+ +K + R L
Sbjct: 163 TALDMILTGKQLRARQALKAGLVDDVVP----QTILLEAAVELAKKERLAQRTL 212
>sp|B4TCA8|FADJ_SALHS Fatty acid oxidation complex subunit alpha OS=Salmonella heidelberg
(strain SL476) GN=fadJ PE=3 SV=1
Length = 715
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 8/174 (4%)
Query: 9 FETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPI 66
+ I E+ + V+ S+ F AGAD+ ++ + E + + ++ALP+
Sbjct: 43 LKQIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPV 102
Query: 67 PTIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKS 124
P IA I GA LGGGLEMALAC RIC + +LGLPE L ++PG+GGTQRLPRLVG S
Sbjct: 103 PVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVS 162
Query: 125 VAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
A D+I TG+++ + A+ GLV+ VP Q LE A E+ +K + R L
Sbjct: 163 TALDMILTGKQLRARQALKAGLVDDVVP----QTILLEAAVELAKKERLAQRTL 212
>sp|B5EZR9|FADJ_SALA4 Fatty acid oxidation complex subunit alpha OS=Salmonella agona
(strain SL483) GN=fadJ PE=3 SV=1
Length = 715
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 8/174 (4%)
Query: 9 FETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPI 66
+ I E+ + V+ S+ F AGAD+ ++ + E + + ++ALP+
Sbjct: 43 LKQIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPV 102
Query: 67 PTIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKS 124
P IA I GA LGGGLEMALAC RIC + +LGLPE L ++PG+GGTQRLPRLVG S
Sbjct: 103 PVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVS 162
Query: 125 VAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
A D+I TG+++ + A+ GLV+ VP Q LE A E+ +K + R L
Sbjct: 163 TALDMILTGKQLRARQALKAGLVDDVVP----QTILLEAAVELAKKERLAQRTL 212
>sp|B5FPN1|FADJ_SALDC Fatty acid oxidation complex subunit alpha OS=Salmonella dublin
(strain CT_02021853) GN=fadJ PE=3 SV=1
Length = 715
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 8/174 (4%)
Query: 9 FETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPI 66
+ I E+ + V+ S+ F AGAD+ ++ + E + + ++ALP+
Sbjct: 43 LKQIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPV 102
Query: 67 PTIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKS 124
P IA I GA LGGGLEMALAC RIC + +LGLPE L ++PG+GGTQRLPRLVG S
Sbjct: 103 PVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVS 162
Query: 125 VAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
A D+I TG+++ + A+ GLV+ VP Q LE A E+ +K + R L
Sbjct: 163 TALDMILTGKQLRARQALKAGLVDDVVP----QTILLEAAVELAKKERLAQRTL 212
>sp|Q57LW6|FADJ_SALCH Fatty acid oxidation complex subunit alpha OS=Salmonella
choleraesuis (strain SC-B67) GN=fadJ PE=3 SV=1
Length = 715
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 8/174 (4%)
Query: 9 FETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPI 66
+ I E+ + V+ S+ F AGAD+ ++ + E + + ++ALP+
Sbjct: 43 LKQIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPV 102
Query: 67 PTIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKS 124
P IA I GA LGGGLEMALAC RIC + +LGLPE L ++PG+GGTQRLPRLVG S
Sbjct: 103 PVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVS 162
Query: 125 VAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
A D+I TG+++ + A+ GLV+ VP Q LE A E+ +K + R L
Sbjct: 163 TALDMILTGKQLRARQALKAGLVDDVVP----QTILLEAAVELAKKERLAQRTL 212
>sp|B5RCL3|FADJ_SALG2 Fatty acid oxidation complex subunit alpha OS=Salmonella gallinarum
(strain 287/91 / NCTC 13346) GN=fadJ PE=3 SV=1
Length = 715
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 8/174 (4%)
Query: 9 FETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPI 66
+ I E+ + V+ S+ F AGAD+ ++ + E + + ++ALP+
Sbjct: 43 LKQIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPV 102
Query: 67 PTIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKS 124
P IA I GA LGGGLEMALAC RIC + +LGLPE L ++PG+GGTQRLPRLVG S
Sbjct: 103 PVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVS 162
Query: 125 VAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
A D+I TG+++ + A+ GLV+ VP Q LE A E+ +K + R L
Sbjct: 163 TALDMILTGKQLRARQALKAGLVDDVVP----QTILLEAAVELAKKERLAQRTL 212
>sp|B5R3R9|FADJ_SALEP Fatty acid oxidation complex subunit alpha OS=Salmonella
enteritidis PT4 (strain P125109) GN=fadJ PE=3 SV=1
Length = 715
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 8/174 (4%)
Query: 9 FETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPI 66
+ I E+ + V+ S+ F AGAD+ ++ + E + + ++ALP+
Sbjct: 43 LKQIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPV 102
Query: 67 PTIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKS 124
P IA I GA LGGGLEMALAC RIC + +LGLPE L ++PG+GGTQRLPRLVG S
Sbjct: 103 PVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVS 162
Query: 125 VAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
A D+I TG+++ + A+ GLV+ VP Q LE A E+ +K + R L
Sbjct: 163 TALDMILTGKQLRARQALKAGLVDDVVP----QTILLEAAVELAKKERLAQRTL 212
>sp|A9N453|FADJ_SALPB Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi
B (strain ATCC BAA-1250 / SPB7) GN=fadJ PE=3 SV=1
Length = 715
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 8/174 (4%)
Query: 9 FETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPI 66
+ I E+ + V+ S+ F AGAD+ ++ + E + + ++ALP+
Sbjct: 43 LKQIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPV 102
Query: 67 PTIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKS 124
P IA I GA LGGGLEMALAC RIC + +LGLPE L ++PG+GGTQRLPRLVG S
Sbjct: 103 PVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVS 162
Query: 125 VAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
A D+I TG+++ + A+ GLV+ VP Q LE A E+ +K + R L
Sbjct: 163 TALDMILTGKQLRARQALKAGLVDDVVP----QTILLEAAVELAKKERLAQRTL 212
>sp|Q8Z4Z0|FADJ_SALTI Fatty acid oxidation complex subunit alpha OS=Salmonella typhi
GN=fadJ PE=3 SV=1
Length = 715
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 8/174 (4%)
Query: 9 FETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPI 66
+ I E+ + V+ S+ F AGAD+ ++ + E + + ++ALP+
Sbjct: 43 LKQIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPV 102
Query: 67 PTIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKS 124
P IA I GA LGGGLEMALAC RIC + +LGLPE L ++PG+GGTQRLPRLVG S
Sbjct: 103 PVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVS 162
Query: 125 VAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
A D+I TG+++ + A+ GLV+ VP Q LE A E+ +K + R L
Sbjct: 163 TALDMILTGKQLRARQALKAGLVDDVVP----QTILLEAAVELAKKERLAQRTL 212
>sp|Q7MIS5|FADJ_VIBVY Fatty acid oxidation complex subunit alpha OS=Vibrio vulnificus
(strain YJ016) GN=fadJ PE=3 SV=1
Length = 705
Score = 117 bits (293), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 99/170 (58%), Gaps = 8/170 (4%)
Query: 5 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPS--EIHFYVNTLRSTFSFLE 62
+K F + + S +++ S P F AGAD+++L+ + E + F L
Sbjct: 39 MKAIFAQLKDSSGLKGLIVHSLKPDNFVAGADVRMLEACKTAPEAEALARQGQELFQQLS 98
Query: 63 ALPIPTIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRL 120
LP P +A I G LGGGLE+ALACD R+C + A LGLPE L ++PG+GGTQRLPRL
Sbjct: 99 DLPYPVVAAIHGPCLGGGLELALACDFRVCSDDDATRLGLPEVQLGLLPGSGGTQRLPRL 158
Query: 121 VGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQK 170
+G + D+I TG+++ K A LG+V+ VP Q L++A++ +K
Sbjct: 159 IGLLPSLDLILTGKQLRAKKAKKLGVVDACVP----QTILLDVAKQFVEK 204
>sp|B4TQC2|FADJ_SALSV Fatty acid oxidation complex subunit alpha OS=Salmonella
schwarzengrund (strain CVM19633) GN=fadJ PE=3 SV=1
Length = 715
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 8/174 (4%)
Query: 9 FETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPI 66
+ I E+ + V+ S+ F AGAD+ ++ + E + + ++ALP+
Sbjct: 43 LKQIRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPV 102
Query: 67 PTIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKS 124
P IA I GA LGGGLEMALAC RIC + +LGLPE L ++PG+GGTQRLPRLVG S
Sbjct: 103 PVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVS 162
Query: 125 VAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
A D+I TG+++ + A+ GLV+ VP Q LE A E+ +K + R L
Sbjct: 163 TALDMILTGKQLRARQALRAGLVDDVVP----QTILLEAAVELAKKERLAQRTL 212
>sp|B1LME7|FADJ_ECOSM Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 98/161 (60%), Gaps = 4/161 (2%)
Query: 10 ETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPIP 67
+ + E+ V+ S+ P F AGAD+ ++ + E + + + ALP+P
Sbjct: 44 KQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPVP 103
Query: 68 TIAVIDGAALGGGLEMALACDLRICGEAA--LLGLPETGLAIIPGAGGTQRLPRLVGKSV 125
IA I GA LGGGLE+ALAC R+C + A +LGLPE L ++PG+GGTQRLPRL+G S
Sbjct: 104 VIAAIHGACLGGGLELALACHGRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVST 163
Query: 126 AKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQE 166
A ++I TG+++ K A+ LGLV+ VP A+E+A++
Sbjct: 164 ALEMILTGKQLRAKQALKLGLVDDVVPQSILLEAAVELAKQ 204
>sp|B7NP24|FADJ_ECO7I Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 98/161 (60%), Gaps = 4/161 (2%)
Query: 10 ETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPIP 67
+ + E+ V+ S+ P F AGAD+ ++ + E + + + ALP+P
Sbjct: 44 KQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPVP 103
Query: 68 TIAVIDGAALGGGLEMALACDLRICGEAA--LLGLPETGLAIIPGAGGTQRLPRLVGKSV 125
IA I GA LGGGLE+ALAC R+C + A +LGLPE L ++PG+GGTQRLPRL+G S
Sbjct: 104 VIAAIHGACLGGGLELALACHGRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVST 163
Query: 126 AKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQE 166
A ++I TG+++ K A+ LGLV+ VP A+E+A++
Sbjct: 164 ALEMILTGKQLRAKQALKLGLVDDVVPQSILLEAAVELAKQ 204
>sp|B7MGV7|FADJ_ECO45 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 97/161 (60%), Gaps = 4/161 (2%)
Query: 10 ETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPIP 67
+ I E+ V+ S+ P F AGAD+ ++ + E + + + ALPIP
Sbjct: 44 KQIRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPIP 103
Query: 68 TIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSV 125
IA I GA LGGGLE+ALAC R+C + +LGLPE L ++PG+GGTQRLPRL+G S
Sbjct: 104 VIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVST 163
Query: 126 AKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQE 166
A ++I TG+++ K A+ LGLV+ VP A+E+A++
Sbjct: 164 ALEMILTGKQLRAKQAVKLGLVDDVVPHSILLEAAVELAKQ 204
>sp|B7UFZ8|FADJ_ECO27 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O127:H6 (strain E2348/69 / EPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 97/161 (60%), Gaps = 4/161 (2%)
Query: 10 ETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPIP 67
+ I E+ V+ S+ P F AGAD+ ++ + E + + + ALPIP
Sbjct: 44 KQIRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPIP 103
Query: 68 TIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSV 125
IA I GA LGGGLE+ALAC R+C + +LGLPE L ++PG+GGTQRLPRL+G S
Sbjct: 104 VIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVST 163
Query: 126 AKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQE 166
A ++I TG+++ K A+ LGLV+ VP A+E+A++
Sbjct: 164 ALEMILTGKQLRAKQAVKLGLVDDVVPHSILLEAAVELAKQ 204
>sp|Q1R972|FADJ_ECOUT Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain UTI89 / UPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 97/161 (60%), Gaps = 4/161 (2%)
Query: 10 ETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPIP 67
+ I E+ V+ S+ P F AGAD+ ++ + E + + + ALPIP
Sbjct: 44 KQIRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPIP 103
Query: 68 TIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSV 125
IA I GA LGGGLE+ALAC R+C + +LGLPE L ++PG+GGTQRLPRL+G S
Sbjct: 104 VIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVST 163
Query: 126 AKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQE 166
A ++I TG+++ K A+ LGLV+ VP A+E+A++
Sbjct: 164 ALEMILTGKQLRAKQAVKLGLVDDVVPHSILLEAAVELAKQ 204
>sp|A1ADI8|FADJ_ECOK1 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O1:K1 / APEC GN=fadJ PE=3 SV=1
Length = 714
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 97/161 (60%), Gaps = 4/161 (2%)
Query: 10 ETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPIP 67
+ I E+ V+ S+ P F AGAD+ ++ + E + + + ALPIP
Sbjct: 44 KQIRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPIP 103
Query: 68 TIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSV 125
IA I GA LGGGLE+ALAC R+C + +LGLPE L ++PG+GGTQRLPRL+G S
Sbjct: 104 VIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVST 163
Query: 126 AKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQE 166
A ++I TG+++ K A+ LGLV+ VP A+E+A++
Sbjct: 164 ALEMILTGKQLRAKQAVKLGLVDDVVPHSILLEAAVELAKQ 204
>sp|Q87MM3|FADJ_VIBPA Fatty acid oxidation complex subunit alpha OS=Vibrio
parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
GN=fadJ PE=3 SV=1
Length = 703
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 5 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLE 62
+K F + + S ++I S P F AGAD+++L+ + +E + F L
Sbjct: 39 MKEIFAQLKDSSGIKGMIIHSLKPDNFVAGADVRMLEACTTANEAQALAKQGQELFQQLS 98
Query: 63 ALPIPTIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRL 120
LP P +A I G LGGGLE+ALACD R+C + LGLPE L ++PG+GGTQRLPRL
Sbjct: 99 DLPYPVVAAIHGPCLGGGLELALACDYRVCTDFDKTRLGLPEVQLGLLPGSGGTQRLPRL 158
Query: 121 VGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVP 152
+G + D+I TG+++ K A LG+V+ VP
Sbjct: 159 IGLLPSLDLILTGKQLRAKKAKKLGVVDACVP 190
>sp|P52046|CRT_CLOAB 3-hydroxybutyryl-CoA dehydratase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=crt PE=3 SV=1
Length = 261
Score = 116 bits (290), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 93/167 (55%), Gaps = 1/167 (0%)
Query: 2 LRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVL-QMSPSEIHFYVNTLRSTFSF 60
L+ + + I DS V++ + K F AGAD+ + +M+ E + F
Sbjct: 33 LKEMDYVIGEIENDSEVLAVILTGAGEKSFVAGADISEMKEMNTIEGRKFGILGNKVFRR 92
Query: 61 LEALPIPTIAVIDGAALGGGLEMALACDLRICGEAALLGLPETGLAIIPGAGGTQRLPRL 120
LE L P IA ++G ALGGG E+A++CD+RI A G PE GL I PG GGTQRL RL
Sbjct: 93 LELLEKPVIAAVNGFALGGGCEIAMSCDIRIASSNARFGQPEVGLGITPGFGGTQRLSRL 152
Query: 121 VGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEI 167
VG +AK +IFT + + +A+ +GLVN V + A EIA +I
Sbjct: 153 VGMGMAKQLIFTAQNIKADEALRIGLVNKVVEPSELMNTAKEIANKI 199
>sp|B5BBA1|FADJ_SALPK Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi
A (strain AKU_12601) GN=fadJ PE=3 SV=1
Length = 715
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 100/174 (57%), Gaps = 8/174 (4%)
Query: 9 FETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPI 66
+ I E+ + V+ S+ F AGAD+ ++ + E + + ++ALP+
Sbjct: 43 LKQIRENKALQGVVFISAKADNFIAGADINIIGHCQNAQEAETLARQGQQLMAEIQALPV 102
Query: 67 PTIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKS 124
P IA I GA LGGGLEMALAC RIC + +LGLPE L ++PG+GGTQRLPRLVG S
Sbjct: 103 PVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVS 162
Query: 125 VAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
A D+I G+++ + A+ GLV+ VP Q LE A E+ +K + R L
Sbjct: 163 TALDMILIGKQLRARQALKAGLVDDVVP----QTILLEAAVELAKKERLAQRTL 212
>sp|Q5PCX6|FADJ_SALPA Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi
A (strain ATCC 9150 / SARB42) GN=fadJ PE=3 SV=1
Length = 715
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 100/174 (57%), Gaps = 8/174 (4%)
Query: 9 FETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPI 66
+ I E+ + V+ S+ F AGAD+ ++ + E + + ++ALP+
Sbjct: 43 LKQIRENKALQGVVFISAKADNFIAGADINIIGHCQNAQEAETLARQGQQLMAEIQALPV 102
Query: 67 PTIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKS 124
P IA I GA LGGGLEMALAC RIC + +LGLPE L ++PG+GGTQRLPRLVG S
Sbjct: 103 PVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVS 162
Query: 125 VAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
A D+I G+++ + A+ GLV+ VP Q LE A E+ +K + R L
Sbjct: 163 TALDMILIGKQLRARQALKAGLVDDVVP----QTILLEAAVELAKKERLAQRTL 212
>sp|Q0TFA6|FADJ_ECOL5 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 97/161 (60%), Gaps = 4/161 (2%)
Query: 10 ETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPIP 67
+ + E+ V+ S+ P F AGAD+ ++ + E + + + ALPIP
Sbjct: 44 KQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPIP 103
Query: 68 TIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSV 125
IA I GA LGGGLE+ALAC R+C + +LGLPE L ++PG+GGTQRLPRL+G S
Sbjct: 104 VIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVST 163
Query: 126 AKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQE 166
A ++I TG+++ K A+ LGLV+ VP A+E+A++
Sbjct: 164 ALEMILTGKQLRAKQAVKLGLVDDVVPHSILLEAAVELAKQ 204
>sp|B7MY16|FADJ_ECO81 Fatty acid oxidation complex subunit alpha OS=Escherichia coli O81
(strain ED1a) GN=fadJ PE=3 SV=1
Length = 714
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 97/161 (60%), Gaps = 4/161 (2%)
Query: 10 ETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPIP 67
+ + E+ V+ S+ P F AGAD+ ++ + E + + + ALPIP
Sbjct: 44 KQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPIP 103
Query: 68 TIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSV 125
IA I GA LGGGLE+ALAC R+C + +LGLPE L ++PG+GGTQRLPRL+G S
Sbjct: 104 VIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVST 163
Query: 126 AKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQE 166
A ++I TG+++ K A+ LGLV+ VP A+E+A++
Sbjct: 164 ALEMILTGKQLRAKQAVKLGLVDDVVPHSILLEAAVELAKQ 204
>sp|A1JK30|FADJ_YERE8 Fatty acid oxidation complex subunit alpha OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=fadJ PE=3 SV=2
Length = 745
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 86/136 (63%), Gaps = 4/136 (2%)
Query: 21 VMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPIPTIAVIDGAALG 78
++I S P F AGAD+ ++ + + +S + + A P+P +A I GA LG
Sbjct: 74 LVIISGKPDSFIAGADITMIAACHTAQDARILAQKGQSILAQIAAFPVPVVAAIHGACLG 133
Query: 79 GGLEMALACDLRICG--EAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKV 136
GGLE+ALAC RIC + +LGLPE L ++PG+GGTQRLPRLVG S A D+I TGR+V
Sbjct: 134 GGLELALACHSRICSQDDKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSKALDMILTGRQV 193
Query: 137 SGKDAMSLGLVNYYVP 152
+ A+ +GLV+ VP
Sbjct: 194 RARQALKMGLVDDVVP 209
>sp|Q8DB47|FADJ_VIBVU Fatty acid oxidation complex subunit alpha OS=Vibrio vulnificus
(strain CMCP6) GN=fadJ PE=3 SV=1
Length = 705
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 98/170 (57%), Gaps = 8/170 (4%)
Query: 5 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKVLQMSPS--EIHFYVNTLRSTFSFLE 62
+K F + + S +++ S P F AGAD+++L+ + E + F L
Sbjct: 39 MKAIFAQLKDSSGLKGLIVHSLKPDNFVAGADVRMLEACKTAPEAEALARQGQELFQQLS 98
Query: 63 ALPIPTIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRL 120
LP P +A I G LGGGLE+ALACD R+C + A LGLPE L ++PG+GGTQRLPRL
Sbjct: 99 DLPYPVVAAIHGPCLGGGLELALACDFRVCSDDDATRLGLPEVQLGLLPGSGGTQRLPRL 158
Query: 121 VGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQK 170
+G + D+I TG+++ A LG+V+ VP Q L++A++ +K
Sbjct: 159 IGLLPSLDLILTGKQLRANKAKKLGVVDACVP----QTILLDVAKQFVEK 204
>sp|Q9KT58|FADJ_VIBCH Fatty acid oxidation complex subunit alpha OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=fadJ PE=3 SV=2
Length = 708
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 92/153 (60%), Gaps = 5/153 (3%)
Query: 5 LKHAFETISEDSSA-NVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFL 61
++ F T++E ++I S P F AGAD+++L+ S E + + F L
Sbjct: 39 MQAVFATLNEKRGQIKGLIIHSLKPDNFIAGADVRMLEACQSVHEAQALASQGQQMFQQL 98
Query: 62 EALPIPTIAVIDGAALGGGLEMALACDLRICGEAAL--LGLPETGLAIIPGAGGTQRLPR 119
LP P +A I G LGGGLE+ALACD R+C E + LGLPE L ++PG+GGTQRLPR
Sbjct: 99 ADLPFPVVAAIHGPCLGGGLELALACDYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPR 158
Query: 120 LVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVP 152
L+G A D+I TG+++ K A LG+V+ VP
Sbjct: 159 LIGLLPALDLILTGKQLRAKKAKKLGVVDACVP 191
>sp|A5F2P2|FADJ_VIBC3 Fatty acid oxidation complex subunit alpha OS=Vibrio cholerae
serotype O1 (strain ATCC 39541 / Ogawa 395 / O395)
GN=fadJ PE=3 SV=1
Length = 708
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 92/153 (60%), Gaps = 5/153 (3%)
Query: 5 LKHAFETISEDSSA-NVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFL 61
++ F T++E ++I S P F AGAD+++L+ S E + + F L
Sbjct: 39 MQAVFATLNEKRGQIKGLIIHSLKPDNFIAGADVRMLEACQSVHEAQALASQGQQMFQQL 98
Query: 62 EALPIPTIAVIDGAALGGGLEMALACDLRICGEAAL--LGLPETGLAIIPGAGGTQRLPR 119
LP P +A I G LGGGLE+ALACD R+C E + LGLPE L ++PG+GGTQRLPR
Sbjct: 99 ADLPFPVVAAIHGPCLGGGLELALACDYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPR 158
Query: 120 LVGKSVAKDIIFTGRKVSGKDAMSLGLVNYYVP 152
L+G A D+I TG+++ K A LG+V+ VP
Sbjct: 159 LIGLLPALDLILTGKQLRAKKAKKLGVVDACVP 191
>sp|Q8FFG4|FADJ_ECOL6 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fadJ PE=3
SV=1
Length = 714
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 97/161 (60%), Gaps = 4/161 (2%)
Query: 10 ETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPIP 67
+ + E+ V+ S+ P F AGAD+ ++ + E + + + ALP+P
Sbjct: 44 KQLRENKDLRGVVFISAKPDNFIAGADINMIANCKTAQEAEALARQGQQLMAEIHALPVP 103
Query: 68 TIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSV 125
IA I GA LGGGLE+ALAC R+C + +LGLPE L ++PG+GGTQRLPRL+G S
Sbjct: 104 VIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVST 163
Query: 126 AKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQE 166
A ++I TG+++ K A+ LGLV+ VP A+E+A++
Sbjct: 164 ALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVELAKQ 204
>sp|B7LBJ5|FADJ_ECO55 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain 55989 / EAEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 101/173 (58%), Gaps = 8/173 (4%)
Query: 10 ETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPIP 67
+ + E+ V+ S+ P F AGAD+ ++ + E + + + ALPIP
Sbjct: 44 KQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIP 103
Query: 68 TIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSV 125
IA I GA LGGGLE+ALAC R+C + +LGLPE L ++PG+GGTQRLPRL+G S
Sbjct: 104 VIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVST 163
Query: 126 AKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
A ++I TG+++ K A+ LGLV+ VP LE+A E+ +K + R L
Sbjct: 164 ALEMILTGKQLRAKQALKLGLVDDVVP----HSILLEVAVELAKKDRPSSRPL 212
>sp|Q8XCP2|FADJ_ECO57 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O157:H7 GN=fadJ PE=3 SV=1
Length = 714
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 97/161 (60%), Gaps = 4/161 (2%)
Query: 10 ETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPIP 67
+ + E+ V+ S+ P F AGAD+ ++ + E + + + ALPIP
Sbjct: 44 KQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIP 103
Query: 68 TIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSV 125
IA I GA LGGGLE+ALAC R+C + +LGLPE L ++PG+GGTQRLPRL+G S
Sbjct: 104 VIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVST 163
Query: 126 AKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQE 166
A ++I TG+++ K A+ LGLV+ VP A+E+A++
Sbjct: 164 ALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVELAKK 204
>sp|A7ZPF8|FADJ_ECO24 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O139:H28 (strain E24377A / ETEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 101/173 (58%), Gaps = 8/173 (4%)
Query: 10 ETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPIP 67
+ + E+ V+ S+ P F AGAD+ ++ + E + + + ALPIP
Sbjct: 44 KQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIP 103
Query: 68 TIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSV 125
IA I GA LGGGLE+ALAC R+C + +LGLPE L ++PG+GGTQRLPRL+G S
Sbjct: 104 VIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVST 163
Query: 126 AKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
A ++I TG+++ K A+ LGLV+ VP LE+A E+ +K + R L
Sbjct: 164 ALEMILTGKQLRAKQALKLGLVDDVVP----HSILLEVAVELAKKDRPSSRPL 212
>sp|B6I6Q4|FADJ_ECOSE Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain SE11) GN=fadJ PE=3 SV=1
Length = 714
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 101/173 (58%), Gaps = 8/173 (4%)
Query: 10 ETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPIP 67
+ + E+ V+ S+ P F AGAD+ ++ + E + + + ALPIP
Sbjct: 44 KQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIP 103
Query: 68 TIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSV 125
IA I GA LGGGLE+ALAC R+C + +LGLPE L ++PG+GGTQRLPRL+G S
Sbjct: 104 VIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVST 163
Query: 126 AKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
A ++I TG+++ K A+ LGLV+ VP LE+A E+ +K + R L
Sbjct: 164 ALEMILTGKQLRAKQALKLGLVDDVVP----HSILLEVAVELAKKDRPSSRPL 212
>sp|B7M6M2|FADJ_ECO8A Fatty acid oxidation complex subunit alpha OS=Escherichia coli O8
(strain IAI1) GN=fadJ PE=3 SV=1
Length = 714
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 101/173 (58%), Gaps = 8/173 (4%)
Query: 10 ETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPIP 67
+ + E+ V+ S+ P F AGAD+ ++ + E + + + ALPIP
Sbjct: 44 KQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIP 103
Query: 68 TIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSV 125
IA I GA LGGGLE+ALAC R+C + +LGLPE L ++PG+GGTQRLPRL+G S
Sbjct: 104 VIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVST 163
Query: 126 AKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
A ++I TG+++ K A+ LGLV+ VP LE+A E+ +K + R L
Sbjct: 164 ALEMILTGKQLRAKQALKLGLVDDVVP----HSILLEVAVELAKKDRPSSRPL 212
>sp|B5YXY4|FADJ_ECO5E Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O157:H7 (strain EC4115 / EHEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 97/161 (60%), Gaps = 4/161 (2%)
Query: 10 ETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPIP 67
+ + E+ V+ S+ P F AGAD+ ++ + E + + + ALPIP
Sbjct: 44 KQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIP 103
Query: 68 TIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSV 125
IA I GA LGGGLE+ALAC R+C + +LGLPE L ++PG+GGTQRLPRL+G S
Sbjct: 104 VIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVST 163
Query: 126 AKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQE 166
A ++I TG+++ K A+ LGLV+ VP A+E+A++
Sbjct: 164 ALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVELAKK 204
>sp|B2TWV4|FADJ_SHIB3 Fatty acid oxidation complex subunit alpha OS=Shigella boydii
serotype 18 (strain CDC 3083-94 / BS512) GN=fadJ PE=3
SV=1
Length = 714
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 101/173 (58%), Gaps = 8/173 (4%)
Query: 10 ETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPIP 67
+ + E+ V+ S+ P F AGAD+ ++ + E + + + ALPIP
Sbjct: 44 KQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIP 103
Query: 68 TIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSV 125
IA I GA LGGGLE+ALAC R+C + +LGLPE L ++PG+GGTQRLPRL+G S
Sbjct: 104 VIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVST 163
Query: 126 AKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQEINQKVQSVFRIL 178
A ++I TG+++ K A+ LGLV+ VP LE+A E+ +K + R L
Sbjct: 164 ALEMILTGKQLRAKQALKLGLVDDVVP----HSILLEVAVELAKKDRPSSRPL 212
>sp|Q3YZM2|FADJ_SHISS Fatty acid oxidation complex subunit alpha OS=Shigella sonnei
(strain Ss046) GN=fadJ PE=3 SV=1
Length = 714
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 97/161 (60%), Gaps = 4/161 (2%)
Query: 10 ETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPIP 67
+ + E+ V+ S+ P F AGAD+ ++ + E + + + ALPIP
Sbjct: 44 KQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIP 103
Query: 68 TIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSV 125
IA I GA LGGGLE+ALAC R+C + +LGLPE L ++PG+GGTQRLPRL+G S
Sbjct: 104 VIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVST 163
Query: 126 AKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQE 166
A ++I TG+++ K A+ LGLV+ VP A+E+A++
Sbjct: 164 ALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVELAKK 204
>sp|Q83QQ0|FADJ_SHIFL Fatty acid oxidation complex subunit alpha OS=Shigella flexneri
GN=fadJ PE=3 SV=1
Length = 714
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 97/161 (60%), Gaps = 4/161 (2%)
Query: 10 ETISEDSSANVVMIRSSVPKVFCAGADLKVLQ--MSPSEIHFYVNTLRSTFSFLEALPIP 67
+ + E+ V+ S+ P F AGAD+ ++ + E + + + ALPIP
Sbjct: 44 KQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIP 103
Query: 68 TIAVIDGAALGGGLEMALACDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSV 125
IA I GA LGGGLE+ALAC R+C + +LGLPE L ++PG+GGTQRLPRL+G S
Sbjct: 104 VIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVST 163
Query: 126 AKDIIFTGRKVSGKDAMSLGLVNYYVPAGQAQLKALEIAQE 166
A ++I TG+++ K A+ LGLV+ VP A+E+A++
Sbjct: 164 ALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVELAKK 204
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,268,603
Number of Sequences: 539616
Number of extensions: 2517471
Number of successful extensions: 7217
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 6625
Number of HSP's gapped (non-prelim): 434
length of query: 179
length of database: 191,569,459
effective HSP length: 110
effective length of query: 69
effective length of database: 132,211,699
effective search space: 9122607231
effective search space used: 9122607231
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)