BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030340
(179 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1TWL|A Chain A, Inorganic Pyrophosphatase From Pyrococcus Furiosus
Pfu-264096-001
Length = 186
Score = 155 bits (393), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 109/161 (67%)
Query: 9 GPGAPAVCNCVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDP 68
GP P V ++EI KG + KYELDK +GL+K+DRVLYS YP +YG IPRT ED DP
Sbjct: 18 GPDVPEVVYAIIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPRTWYEDDDP 77
Query: 69 MDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHR 128
D++V+M+EPV P + + R IGL MID G+KD K++AV +DP F+ +KDI ++P
Sbjct: 78 FDIMVIMREPVYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDWKDIDDVPKAF 137
Query: 129 LAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLY 169
L EI FF+ YK+ + K++ VE + AEAA I ++++Y
Sbjct: 138 LDEIAHFFKRYKELQGKEIIVEGWEGAEAAKREILRAIEMY 178
>pdb|1UDE|A Chain A, Crystal Structure Of The Inorganic Pyrophosphatase From
The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3
pdb|1UDE|B Chain B, Crystal Structure Of The Inorganic Pyrophosphatase From
The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3
pdb|1UDE|C Chain C, Crystal Structure Of The Inorganic Pyrophosphatase From
The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3
Length = 195
Score = 154 bits (390), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 108/161 (67%)
Query: 9 GPGAPAVCNCVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDP 68
GP P V ++EI KG + KYELDK +GL+K+DRVLY+ YP +YG IPRT ED DP
Sbjct: 27 GPNVPEVVYALIEIPKGSRNKYELDKETGLLKLDRVLYTPFHYPVDYGIIPRTWYEDGDP 86
Query: 69 MDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHR 128
D++V+M+EP P + + R IGL MID G+KD K++AV +DP F+ +KDI ++P
Sbjct: 87 FDIMVIMREPTYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDWKDISDVPKAF 146
Query: 129 LAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLY 169
L EI FF+ YK+ E K++ VE + AEAA I ++++Y
Sbjct: 147 LDEIAHFFKRYKELEGKEIIVEGWEGAEAAKREILRAIEMY 187
>pdb|3Q46|A Chain A, Magnesium Activated Inorganic Pyrophosphatase From
Thermococcus Thioreducens Bound To Hydrolyzed Product At
0.99 Angstrom Resolution
Length = 178
Score = 150 bits (379), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 106/161 (65%)
Query: 9 GPGAPAVCNCVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDP 68
GP P V ++EI KG + KYELDKA+GL+K+DRVLYS YP +YG IP+T +D DP
Sbjct: 10 GPEVPEVVYALIEIPKGSRNKYELDKATGLLKLDRVLYSPFFYPVDYGIIPQTWYDDGDP 69
Query: 69 MDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHR 128
D++V+M+EPV P + + R IG+M M D G+KD K++AV +DP F +KDI ++P
Sbjct: 70 FDIMVIMREPVYPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPYFNDWKDISDVPKAF 129
Query: 129 LAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLY 169
L EI FF+ YK+ + K +E + AE A I ++++Y
Sbjct: 130 LDEIAHFFQRYKELQGKTTKIEGWGNAEEAKREILRAIEMY 170
>pdb|3I98|A Chain A, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|B Chain B, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|C Chain C, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|D Chain D, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|E Chain E, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|F Chain F, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3Q4W|A Chain A, The Structure Of Archaeal Inorganic Pyrophosphatase In
Complex With Substrate
pdb|3Q5V|A Chain A, The Structure Of Inorganic Pyrophosphatase From
Thermococcus Thioreducens In Complex With Magnesium And
Sulfate
pdb|3Q5V|B Chain B, The Structure Of Inorganic Pyrophosphatase From
Thermococcus Thioreducens In Complex With Magnesium And
Sulfate
pdb|3Q9M|A Chain A, The Structure Archaeal Inorganic Pyrophosphatase In
Complex With Pyrophosphate
pdb|3Q9M|B Chain B, The Structure Archaeal Inorganic Pyrophosphatase In
Complex With Pyrophosphate
pdb|3Q9M|C Chain C, The Structure Archaeal Inorganic Pyrophosphatase In
Complex With Pyrophosphate
pdb|3Q3L|A Chain A, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|B Chain B, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|C Chain C, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|D Chain D, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|E Chain E, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|F Chain F, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3R5U|A Chain A, The Structure Of Manganese Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase
pdb|3R5U|B Chain B, The Structure Of Manganese Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase
pdb|3R5V|A Chain A, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|B Chain B, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|C Chain C, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|D Chain D, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|E Chain E, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|F Chain F, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
Length = 178
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 105/161 (65%)
Query: 9 GPGAPAVCNCVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDP 68
GP P V ++EI KG + KYELDK +GL+K+DRVLYS YP +YG IP+T +D DP
Sbjct: 10 GPEVPEVVYALIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPQTWYDDGDP 69
Query: 69 MDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHR 128
D++V+M+EPV P + + R IG+M M D G+KD K++AV +DP F +KDI ++P
Sbjct: 70 FDIMVIMREPVYPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPYFNDWKDISDVPKAF 129
Query: 129 LAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLY 169
L EI FF+ YK+ + K +E + AE A I ++++Y
Sbjct: 130 LDEIAHFFQRYKELQGKTTKIEGWGNAEEAKREILRAIEMY 170
>pdb|3R6E|A Chain A, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|B Chain B, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|C Chain C, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|D Chain D, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|E Chain E, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|F Chain F, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
Length = 178
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 100/161 (62%)
Query: 9 GPGAPAVCNCVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDP 68
GP P V ++EI KG + KYELDK +GL+K+DRVLYS YP +YG IP+T +D DP
Sbjct: 10 GPEVPEVVYALIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPQTWYDDGDP 69
Query: 69 MDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHR 128
D+ V+ +EPV P + + R IG+ D G+KD K++AV +DP F +KDI ++P
Sbjct: 70 FDIXVIXREPVYPLTIIEARPIGIXKXEDSGDKDWKVLAVPVEDPYFNDWKDISDVPKAF 129
Query: 129 LAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLY 169
L EI FF+ YK+ + K +E + AE A I +++ Y
Sbjct: 130 LDEIAHFFQRYKELQGKTTKIEGWGNAEEAKREILRAIEXY 170
>pdb|1QEZ|A Chain A, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|B Chain B, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|C Chain C, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|D Chain D, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|E Chain E, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|F Chain F, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase
Length = 173
Score = 132 bits (331), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 99/161 (61%), Gaps = 3/161 (1%)
Query: 9 GPGAPAVCNCVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDP 68
G AP V N +VEI +G +KYE D G+IKVDRVLY+S+ YP NYGFIP T+ ED DP
Sbjct: 6 GKNAPDVVNVLVEIPQGSNIKYEYDDEEGVIKVDRVLYTSMNYPFNYGFIPGTLEEDGDP 65
Query: 69 MDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPP 126
+DVLV+ + PGS + R IG++ M D+ +D KI+AV D DP F + KDI +LP
Sbjct: 66 LDVLVITNYQLYPGSVIEVRPIGILYMKDEEGEDAKIVAVPKDKTDPSFSNIKDINDLPQ 125
Query: 127 HRLAEIRRFFEDYKKNE-NKKVDVEDFLPAEAAIEAIKYSM 166
+I FFE YK+ E K V + + A A I+ ++
Sbjct: 126 ATKNKIVHFFEHYKELEPGKYVKISGWGSATEAKNRIQLAI 166
>pdb|2BQX|A Chain A, Inorganic Pyrophosphatase From The Pathogenic Bacterium
Helicobacter Pylori-Kinetic And Structural Properties
pdb|2BQY|A Chain A, Inorganic Pyrophosphatase From The Pathogenic Bacterium
Helicobacter Pylori-Kinetic And Structural Properties
Length = 173
Score = 126 bits (317), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 99/161 (61%), Gaps = 4/161 (2%)
Query: 12 APAVCNCVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDV 71
A ++C V+EI K +KYELDK SG + VDRVLY + YP NYGF+P T+ D DP+D
Sbjct: 12 ADSLC-VVIEISKHSNIKYELDKESGALMVDRVLYGAQNYPANYGFVPNTLGSDGDPVDA 70
Query: 72 LVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPPHRL 129
LVL GS ++ R +G++ M D+ D+K+IA+ D DP + KDI +L H L
Sbjct: 71 LVLSDVAFQAGSVVKARLVGVLNMEDESGMDEKLIALPIDKIDPTHSYVKDIDDLSKHTL 130
Query: 130 AEIRRFFEDYKKNE-NKKVDVEDFLPAEAAIEAIKYSMDLY 169
+I+ FFE YK E NK V V+ F E+AI+ ++ ++ Y
Sbjct: 131 DKIKHFFETYKDLEPNKWVKVKGFENKESAIKVLEKAIKAY 171
>pdb|1YGZ|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|B Chain B, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|C Chain C, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|D Chain D, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|E Chain E, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|F Chain F, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
Length = 173
Score = 124 bits (312), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 98/161 (60%), Gaps = 4/161 (2%)
Query: 12 APAVCNCVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDV 71
A ++C V+EI K +KYELDK SG + VDRVLY + YP NYGF+P T+ D DP+D
Sbjct: 12 ADSLC-VVIEISKHSNIKYELDKESGALXVDRVLYGAQNYPANYGFVPNTLGSDGDPVDA 70
Query: 72 LVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPPHRL 129
LVL GS ++ R +G++ D+ D+K+IA+ D DP + KDI +L H L
Sbjct: 71 LVLSDVAFQAGSVVKARLVGVLNXEDESGXDEKLIALPIDKIDPTHSYVKDIDDLSKHTL 130
Query: 130 AEIRRFFEDYKKNE-NKKVDVEDFLPAEAAIEAIKYSMDLY 169
+I+ FFE YK E NK V V+ F E+AI+ ++ ++ Y
Sbjct: 131 DKIKHFFETYKDLEPNKWVKVKGFENKESAIKVLEKAIKAY 171
>pdb|3SW5|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|B Chain B, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|C Chain C, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|D Chain D, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|E Chain E, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|F Chain F, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
Length = 180
Score = 120 bits (300), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 95/166 (57%), Gaps = 4/166 (2%)
Query: 6 IFAGPGAPAVCNCVVEIGKGGK-VKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICE 64
I G P N +VE+ GG+ +KYE+DK SG + VDR LY+S+VYP NYGF+P T+ E
Sbjct: 10 IAVGKNPPEDVNVIVEVSLGGQPIKYEMDKKSGALFVDRFLYTSMVYPGNYGFVPHTLSE 69
Query: 65 DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIK 122
D DP+DVL+ P+LPG + IG + M D G KD+KIIA+ + + D
Sbjct: 70 DGDPIDVLICNTRPLLPGCVINVYPIGALIMEDDGGKDEKIIAIPTPKLTQRYNNIHDYT 129
Query: 123 ELPPHRLAEIRRFFEDYKKNE-NKKVDVEDFLPAEAAIEAIKYSMD 167
+LP L +I FFE YK E K +E + A E IK +++
Sbjct: 130 DLPEITLKQIEHFFEHYKDLEPGKWAKIEGWRDKSFAHELIKQAIE 175
>pdb|1SXV|A Chain A, 1.3a Crystal Structure Of Rv3628, Mycobacterium
Tuberculosis Inorganic Pyrophosphatase (Ppase) At Ph5.0
Length = 172
Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 89/148 (60%), Gaps = 4/148 (2%)
Query: 17 NCVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQ 76
+ +EI KG + KYE+D +G +++DR LY+ + YP +YGFI T+ +D DP+D LVL+
Sbjct: 14 DVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLLP 73
Query: 77 EPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFF 136
+PV PG + R +G+ M+D+ DDK++ V A DP + H +DI ++P L I+ FF
Sbjct: 74 QPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFF 133
Query: 137 EDYKKNEN----KKVDVEDFLPAEAAIE 160
YK E K D D AEA ++
Sbjct: 134 VHYKDLEPGKFVKAADWVDRAEAEAEVQ 161
>pdb|2UXS|A Chain A, 2.7a Crystal Structure Of Inorganic Pyrophosphatase
(rv3628) From Mycobacterium Tuberculosis At Ph 7.5
pdb|2UXS|B Chain B, 2.7a Crystal Structure Of Inorganic Pyrophosphatase
(rv3628) From Mycobacterium Tuberculosis At Ph 7.5
pdb|2UXS|C Chain C, 2.7a Crystal Structure Of Inorganic Pyrophosphatase
(rv3628) From Mycobacterium Tuberculosis At Ph 7.5
Length = 169
Score = 117 bits (294), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 89/148 (60%), Gaps = 4/148 (2%)
Query: 17 NCVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQ 76
+ +EI KG + KYE+D +G +++DR LY+ + YP +YGFI T+ +D DP+D LVL+
Sbjct: 11 DVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLLP 70
Query: 77 EPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFF 136
+PV PG + R +G+ M+D+ DDK++ V A DP + H +DI ++P L I+ FF
Sbjct: 71 QPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFF 130
Query: 137 EDYKKNEN----KKVDVEDFLPAEAAIE 160
YK E K D D AEA ++
Sbjct: 131 VHYKDLEPGKFVKAADWVDRAEAEAEVQ 158
>pdb|1WCF|A Chain A, 1.54 A Crystal Structure Of Rv3628, Mycobacterium
Tuberculosis Inorganic Pyrophosphatase (Ppase) At Ph7.0
Length = 171
Score = 117 bits (294), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 89/148 (60%), Gaps = 4/148 (2%)
Query: 17 NCVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQ 76
+ +EI KG + KYE+D +G +++DR LY+ + YP +YGFI T+ +D DP+D LVL+
Sbjct: 13 DVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLLP 72
Query: 77 EPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFF 136
+PV PG + R +G+ M+D+ DDK++ V A DP + H +DI ++P L I+ FF
Sbjct: 73 QPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFF 132
Query: 137 EDYKKNEN----KKVDVEDFLPAEAAIE 160
YK E K D D AEA ++
Sbjct: 133 VHYKDLEPGKFVKAADWVDRAEAEAEVQ 160
>pdb|4ECP|A Chain A, X-Ray Crystal Structure Of Inorganic Pyrophosphate Ppa
From Mycobacterium Leprae
pdb|4ECP|B Chain B, X-Ray Crystal Structure Of Inorganic Pyrophosphate Ppa
From Mycobacterium Leprae
Length = 167
Score = 117 bits (293), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 96/164 (58%), Gaps = 1/164 (0%)
Query: 9 GPGAPAVCNCVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDP 68
GPG+ + +EI KG + KYE+D +G +++DR LY+ + YP +YGFI T+ ED DP
Sbjct: 1 GPGSMVQFDVTIEIPKGQRNKYEVDHKTGRVRLDRYLYTPMAYPTDYGFIEDTLGEDGDP 60
Query: 69 MDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHR 128
+D LVL+ EP+ PG + R +G+ M+D+ DDK++ V +D + H I ++P
Sbjct: 61 LDALVLLPEPLFPGVLVEARPVGMFRMVDEHGGDDKVLCVPVNDHRWDHIHGIIDVPTFE 120
Query: 129 LAEIRRFFEDYKKNE-NKKVDVEDFLPAEAAIEAIKYSMDLYAS 171
L I+ FF YK E K V D++ + A ++ S++ + +
Sbjct: 121 LDAIKHFFVHYKDLEPGKFVKAADWVGRDEAEAEVQRSVERFKA 164
>pdb|2PRD|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Thermus Thermophilus
Length = 174
Score = 117 bits (292), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 95/164 (57%), Gaps = 3/164 (1%)
Query: 9 GPGAPAVCNCVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDP 68
G AP V + V+E+ +G KYE D G IK+DRVL + YP +YGFIP T+ ED DP
Sbjct: 9 GDKAPEVVHMVIEVPRGSGNKYEYDPDLGAIKLDRVLPGAQFYPGDYGFIPSTLAEDGDP 68
Query: 69 MDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHR 128
+D LVL P+LPG + R +GL+ M D+ D K+I V A+D H +DI ++P
Sbjct: 69 LDGLVLSTYPLLPGVVVEVRVVGLLLMEDEKGGDAKVIGVVAEDQRLDHIQDIGDVPEGV 128
Query: 129 LAEIRRFFEDYKKNENKK---VDVEDFLPAEAAIEAIKYSMDLY 169
EI+ FFE YK E KK V V + +AA+E ++ + Y
Sbjct: 129 KQEIQHFFETYKALEAKKGKWVKVTGWRDRKAALEEVRACIARY 172
>pdb|3FQ3|A Chain A, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|B Chain B, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|C Chain C, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|D Chain D, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|E Chain E, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|F Chain F, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|G Chain G, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|H Chain H, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|I Chain I, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|J Chain J, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|K Chain K, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|L Chain L, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
Length = 197
Score = 114 bits (284), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 6 IFAGPGAPAVCNCVVEIGKGGK-VKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICE 64
I G P N ++E+ GG+ +KYE+DK +G + VDR LY+ + YP NYGF+P T+ E
Sbjct: 27 ISIGSNPPEDVNVIIEVPVGGQPIKYEMDKKAGALIVDRFLYTPMTYPGNYGFVPHTLSE 86
Query: 65 DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYK--DIK 122
D DP+DVLV P++PG + R IG++ M D KD+KIIAV + R+ K D
Sbjct: 87 DGDPIDVLVCNTRPLIPGCVINVRPIGVLVMEDNSGKDEKIIAVPSPHLTRRYEKIHDYT 146
Query: 123 ELPPHRLAEIRRFFEDYKKNE-NKKVDVEDF 152
++P L +I FFE YK E K V + D+
Sbjct: 147 DMPEITLKQIAHFFEHYKDLEPGKWVKIGDW 177
>pdb|2EIP|A Chain A, Inorganic Pyrophosphatase
pdb|2EIP|B Chain B, Inorganic Pyrophosphatase
pdb|1IPW|A Chain A, Inorganic Pyrophosphatase From Escherichia Coli With Three
Magnesium Ions
pdb|1IPW|B Chain B, Inorganic Pyrophosphatase From Escherichia Coli With Three
Magnesium Ions
pdb|1JFD|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1JFD|B Chain B, Structure Of Inorganic Pyrophosphatase
pdb|1FAJ|A Chain A, Inorganic Pyrophosphatase
pdb|1INO|A Chain A, Recombinant Inorganic Pyrophosphatase From Escherichia
Coli
Length = 175
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 94/164 (57%), Gaps = 4/164 (2%)
Query: 8 AGPGAPAVCNCVVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDS 66
AG P V+EI +KYE+DK SG + VDR + +++ YP NYG+I T+ D
Sbjct: 7 AGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDG 66
Query: 67 DPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKEL 124
DP+DVLV P+ PGS +RCR +G++ M D+ +D K++AV E+ H KD+ +L
Sbjct: 67 DPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDL 126
Query: 125 PPHRLAEIRRFFEDYKKNE-NKKVDVEDFLPAEAAIEAIKYSMD 167
P A+I FFE YK E K V VE + AEAA I S +
Sbjct: 127 PELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASFE 170
>pdb|3D53|A Chain A, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|B Chain B, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|C Chain C, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|D Chain D, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|E Chain E, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|F Chain F, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3EMJ|A Chain A, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|B Chain B, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|C Chain C, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|D Chain D, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|E Chain E, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|F Chain F, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|G Chain G, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|H Chain H, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|I Chain I, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|J Chain J, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|K Chain K, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|L Chain L, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
Length = 173
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 82/133 (61%), Gaps = 3/133 (2%)
Query: 17 NCVVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLM 75
N ++EI G +KYE DK SG + VDR + +++ YP NYGFIP T+ D DP+DVLV+
Sbjct: 17 NVIIEIPMNSGPIKYEFDKESGALFVDRFMQTTMSYPCNYGFIPDTLSNDGDPVDVLVVA 76
Query: 76 QEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPPHRLAEIR 133
PV+PGS ++CRAIG++ M D+ D+KIIAV D F H K++ +L I
Sbjct: 77 HHPVVPGSVIKCRAIGVLMMEDESGLDEKIIAVPTSKLDITFDHIKELDDLCEMLKKRIV 136
Query: 134 RFFEDYKKNENKK 146
FFE YK E K
Sbjct: 137 HFFEHYKDLEKGK 149
>pdb|3D63|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei
pdb|3D63|B Chain B, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei
pdb|3D63|C Chain C, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei
pdb|3EIY|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei With Bound Pyrophosphate
pdb|3EIZ|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei, H32 Crystal Form
pdb|3EJ0|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei With Bound
N-(Pyridin-3-Ylmethyl) Aniline, H32 Crystal Form
pdb|3EJ2|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei With Bound 5-Amino-1-(4-
Chlorophenyl)-1h-Pyrazole-4-Carbonitrile, H32 Crystal
Form
pdb|3GVF|A Chain A, 1.7 Angstrom Crystal Structure Of Inorganic
Pyrophosphatase From Burkholderia Pseudomallei Bound
With Phosphate
Length = 196
Score = 111 bits (277), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 98/166 (59%), Gaps = 4/166 (2%)
Query: 1 MLYVLIFAGPGAPAVCNCVVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIP 59
M + + AG P N ++EI + VKYE DKA GL+ VDR + + + YP NYGFIP
Sbjct: 22 MSFSNVPAGKDLPQDFNVIIEIPAQSEPVKYEADKALGLLVVDRFIGTGMRYPVNYGFIP 81
Query: 60 RTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD--PEFRH 117
+T+ D DP+DVLV+ P+L GS +R RA+G++ M D+ D K++AV D P +
Sbjct: 82 QTLSGDGDPVDVLVITPFPLLAGSVVRARALGMLKMTDESGVDAKLVAVPHDKVCPMTAN 141
Query: 118 YKDIKELPPHRLAEIRRFFEDYKKNE-NKKVDVEDFLPAEAAIEAI 162
K I ++P + +I+ FFE YK E K V VE + +AA + I
Sbjct: 142 LKSIDDVPAYLKDQIKHFFEQYKALEKGKWVKVEGWDGIDAAHKEI 187
>pdb|1OBW|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1OBW|B Chain B, Structure Of Inorganic Pyrophosphatase
pdb|1OBW|C Chain C, Structure Of Inorganic Pyrophosphatase
pdb|1I6T|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1I40|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|2AU6|A Chain A, Crystal Structure Of Catalytic Intermediate Of Inorganic
Pyrophosphatase
pdb|2AU8|A Chain A, Catalytic Intermediate Structure Of Inorganic
Pyrophosphatase
pdb|2AU9|A Chain A, Inorganic Pyrophosphatase Complexed With Substrate
pdb|2AUU|A Chain A, Inorganic Pyrophosphatase Complexed With Magnesium
Pyrophosphate And Fluoride
pdb|1IGP|A Chain A, X-Ray Crystallographic Studies Of Recombinant Inorganic
Pyrophosphatase From Escherichia Coli
Length = 175
Score = 110 bits (276), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 93/164 (56%), Gaps = 4/164 (2%)
Query: 8 AGPGAPAVCNCVVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDS 66
AG P V+EI +KYE+DK SG + VDR + +++ YP NYG+I T+ D
Sbjct: 7 AGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDG 66
Query: 67 DPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKEL 124
DP+DVLV P+ PGS RCR +G++ M D+ +D K++AV E+ H KD+ +L
Sbjct: 67 DPVDVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDL 126
Query: 125 PPHRLAEIRRFFEDYKKNE-NKKVDVEDFLPAEAAIEAIKYSMD 167
P A+I FFE YK E K V VE + AEAA I S +
Sbjct: 127 PELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASFE 170
>pdb|1MJZ|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D97n
Length = 175
Score = 110 bits (275), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 94/164 (57%), Gaps = 4/164 (2%)
Query: 8 AGPGAPAVCNCVVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDS 66
AG P V+EI +KYE+DK SG + VDR + +++ YP NYG+I T+ D
Sbjct: 7 AGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDG 66
Query: 67 DPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKEL 124
DP+DVLV P+ PGS +RCR +G++ M ++ +D K++AV E+ H KD+ +L
Sbjct: 67 DPVDVLVPTPYPLQPGSVIRCRPVGVLKMTNEAGEDAKLVAVPHSKLSKEYDHIKDVNDL 126
Query: 125 PPHRLAEIRRFFEDYKKNE-NKKVDVEDFLPAEAAIEAIKYSMD 167
P A+I FFE YK E K V VE + AEAA I S +
Sbjct: 127 PELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASFE 170
>pdb|1MJW|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D42n
pdb|1MJW|B Chain B, Structure Of Inorganic Pyrophosphatase Mutant D42n
Length = 175
Score = 110 bits (275), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 94/164 (57%), Gaps = 4/164 (2%)
Query: 8 AGPGAPAVCNCVVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDS 66
AG P V+EI +KYE+DK SG + V+R + +++ YP NYG+I T+ D
Sbjct: 7 AGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVNRFMSTAMFYPCNYGYINHTLSLDG 66
Query: 67 DPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKEL 124
DP+DVLV P+ PGS +RCR +G++ M D+ +D K++AV E+ H KD+ +L
Sbjct: 67 DPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDL 126
Query: 125 PPHRLAEIRRFFEDYKKNE-NKKVDVEDFLPAEAAIEAIKYSMD 167
P A+I FFE YK E K V VE + AEAA I S +
Sbjct: 127 PELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASFE 170
>pdb|1MJX|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D65n
pdb|1MJX|B Chain B, Structure Of Inorganic Pyrophosphatase Mutant D65n
Length = 175
Score = 110 bits (275), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 94/164 (57%), Gaps = 4/164 (2%)
Query: 8 AGPGAPAVCNCVVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDS 66
AG P V+EI +KYE+DK SG + VDR + +++ YP NYG+I T+ +
Sbjct: 7 AGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLNG 66
Query: 67 DPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKEL 124
DP+DVLV P+ PGS +RCR +G++ M D+ +D K++AV E+ H KD+ +L
Sbjct: 67 DPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDL 126
Query: 125 PPHRLAEIRRFFEDYKKNE-NKKVDVEDFLPAEAAIEAIKYSMD 167
P A+I FFE YK E K V VE + AEAA I S +
Sbjct: 127 PELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASFE 170
>pdb|1MJY|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D70n
pdb|1MJY|B Chain B, Structure Of Inorganic Pyrophosphatase Mutant D70n
Length = 175
Score = 109 bits (272), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 93/164 (56%), Gaps = 4/164 (2%)
Query: 8 AGPGAPAVCNCVVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDS 66
AG P V+EI +KYE+DK SG + VDR + +++ YP NYG+I T+ D
Sbjct: 7 AGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDG 66
Query: 67 DPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKEL 124
DP++VLV P+ PGS RCR +G++ M D+ +D K++AV E+ H KD+ +L
Sbjct: 67 DPVNVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDL 126
Query: 125 PPHRLAEIRRFFEDYKKNE-NKKVDVEDFLPAEAAIEAIKYSMD 167
P A+I FFE YK E K V VE + AEAA I S +
Sbjct: 127 PELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASFE 170
>pdb|2AU7|A Chain A, The R43q Active Site Variant Of E.Coli Inorganic
Pyrophosphatase
Length = 175
Score = 109 bits (272), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 93/164 (56%), Gaps = 4/164 (2%)
Query: 8 AGPGAPAVCNCVVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDS 66
AG P V+EI +KYE+DK SG + VD+ + +++ YP NYG+I T+ D
Sbjct: 7 AGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDQFMSTAMFYPCNYGYINHTLSLDG 66
Query: 67 DPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKEL 124
DP+DVLV P+ PGS RCR +G++ M D+ +D K++AV E+ H KD+ +L
Sbjct: 67 DPVDVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDL 126
Query: 125 PPHRLAEIRRFFEDYKKNE-NKKVDVEDFLPAEAAIEAIKYSMD 167
P A+I FFE YK E K V VE + AEAA I S +
Sbjct: 127 PELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASFE 170
>pdb|3LD3|A Chain A, Crystal Structure Of Inorganic Phosphatase From Anaplasma
Phagocytophilum At 1.75a Resolution
pdb|3LD3|B Chain B, Crystal Structure Of Inorganic Phosphatase From Anaplasma
Phagocytophilum At 1.75a Resolution
Length = 199
Score = 107 bits (266), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 97/165 (58%), Gaps = 4/165 (2%)
Query: 6 IFAGPGAPAVCNCVVEIGKGGK-VKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICE 64
I +G AP N V+E+ + VKYE D+ +G + VDR L +++ YP NYGFIP TI
Sbjct: 27 IGSGSNAPEEVNVVIEVSQDSHPVKYEFDEKNGALWVDRFLPTAMYYPCNYGFIPNTIAG 86
Query: 65 DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIK 122
D DP+DVLVL + PV+PG+ + R +G++ M D+ +D K++AV A D + + +
Sbjct: 87 DGDPVDVLVLARFPVMPGAVICVRPVGVLMMNDEKGEDAKVLAVPATKVDQYYGNIVNYS 146
Query: 123 ELPPHRLAEIRRFFEDYKKNENKK-VDVEDFLPAEAAIEAIKYSM 166
+LP L I FF YKK E K V V + A +A E I+ ++
Sbjct: 147 DLPSSFLDSISHFFSFYKKLEKDKFVSVGCWQDAASAKELIRSAI 191
>pdb|3LO0|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Ehrlichia Chaffeensis
Length = 193
Score = 103 bits (257), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 84/151 (55%), Gaps = 4/151 (2%)
Query: 6 IFAGPGAPAVCNCVVEIGKGG-KVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICE 64
+ G P N ++EI + VKYE DK L VDR L +S+ YP NYGFIP T
Sbjct: 27 VTGGDNVPKEINVIIEISQNSCPVKYEFDKEKNLFCVDRFLPTSMYYPCNYGFIPHTCAG 86
Query: 65 DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIK 122
D DP+DVLV + PV+ G+ +R R +G++ M D+ +D KI+AV D + + KD
Sbjct: 87 DGDPVDVLVASRFPVMSGAVIRARPVGVLVMHDESGEDVKILAVPTHKVDQYYNNIKDYS 146
Query: 123 ELPPHRLAEIRRFFEDYKK-NENKKVDVEDF 152
+ P L I FF YKK E+K V VE +
Sbjct: 147 DFPVSFLNSISHFFTFYKKLEEDKFVSVEGW 177
>pdb|3TR4|A Chain A, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|B Chain B, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|C Chain C, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|D Chain D, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|E Chain E, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|F Chain F, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
Length = 178
Score = 103 bits (256), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 91/169 (53%), Gaps = 11/169 (6%)
Query: 5 LIFAGPGAPAVCNCVVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTIC 63
L+ AG G N ++EI GG+VKYE DK G + VDR +S YP NYGF+P T+
Sbjct: 7 LVSAGKGIDDF-NVIIEIPANGGEVKYEYDKELGFLTVDRFXPTSXRYPCNYGFVPSTLA 65
Query: 64 EDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAV-----CADDPEFRHY 118
+D DP+DVLVL PV PG R RA+G+ D+ +D K++AV C +
Sbjct: 66 QDGDPLDVLVLTPVPVQPGVLXRVRALGIXKXEDEAGEDSKVLAVPVVKACRAYEAIQSL 125
Query: 119 KDIKELPPHRLAEIRRFFEDYKKNE-NKKVDVEDFLPAEAAIEAIKYSM 166
KDI L L I FFE YK E NK V+ + EAA + + S+
Sbjct: 126 KDISSL---LLDAISHFFERYKDLEPNKWAKVKGWEDKEAAKKEFEASI 171
>pdb|3I4Q|A Chain A, Structure Of A Putative Inorganic Pyrophosphatase From The
Oil- Degrading Bacterium Oleispira Antarctica
Length = 176
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 87/171 (50%), Gaps = 4/171 (2%)
Query: 3 YVLIFAGPGAPAVCNCVVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRT 61
Y I AG P +EI +KYE+DK + VDR + YP NYG+I T
Sbjct: 4 YNTIPAGKDLPNDIYVAIEIPANASPIKYEIDKDXDALLVDRFXATPXFYPANYGYINNT 63
Query: 62 ICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPE--FRHYK 119
+ +D D +DVLV+ PV PGS +R R +G++ D+ D+K++AV + +
Sbjct: 64 LADDGDALDVLVITPYPVAPGSVIRARPVGVLKXSDEAGGDEKLLAVPHEKLTQLYNDIH 123
Query: 120 DIKELPPHRLAEIRRFFEDYKKNE-NKKVDVEDFLPAEAAIEAIKYSMDLY 169
DI ++P +I FFE YK E K V VE + A+AA AI S Y
Sbjct: 124 DIDDVPQLLKDQIVHFFEHYKDLEKGKWVKVEGWENADAARAAIVKSAAAY 174
>pdb|1YPP|A Chain A, Acid Anhydride Hydrolase
pdb|1YPP|B Chain B, Acid Anhydride Hydrolase
Length = 286
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 30/190 (15%)
Query: 15 VCNCVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTIC 63
+ N VVEI + K E+ D A G ++ R + Y HNYG P+T
Sbjct: 42 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTAKGKLRFVRNCFPHHGYIHNYGAFPQTWE 101
Query: 64 E------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD 111
+ D+DP+DVL + + G + +A+G+M ++D+GE D K+IA+ +
Sbjct: 102 DPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 161
Query: 112 D---PEFRHYKDIKELPPHRLAEIRRFFEDYK----KNENKKVDVEDFLPAEAAIEAIKY 164
D P+ +D+++ P L +F YK K EN+ + + A++ IK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKE 221
Query: 165 SMDLYASYIV 174
+ D + I
Sbjct: 222 THDSWKQLIA 231
>pdb|8PRK|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces
Cerevisiae Soluble Inorganic Pyrophosphatase: Structural
Studies And Mechanistic Implications
pdb|8PRK|B Chain B, The R78k And D117e Active Site Variants Of Saccharomyces
Cerevisiae Soluble Inorganic Pyrophosphatase: Structural
Studies And Mechanistic Implications
Length = 287
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 15 VCNCVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTIC 63
+ N VVEI + K E+ D G +K R + Y HNYG P+T
Sbjct: 43 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLKFVRNCFPHHGYIHNYGAFPQTWE 102
Query: 64 E------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD 111
+ D+DP+DVL + + G + +A+G+M ++D+GE D K+IA+ +
Sbjct: 103 DPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 162
Query: 112 D---PEFRHYKDIKELPPHRLAEIRRFFEDYK----KNENKKVDVEDFLPAEAAIEAIKY 164
D P+ +D+++ P L +F YK K EN+ + + A++ IK
Sbjct: 163 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKE 222
Query: 165 SMDLYASYIV 174
+ D + I
Sbjct: 223 THDSWKQLIA 232
>pdb|1HUJ|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And
Its K61r Mutant
pdb|1HUJ|B Chain B, Refined Structure Of Yeast Inorganic Pyrophosphatase And
Its K61r Mutant
Length = 281
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 15 VCNCVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTIC 63
+ N VVEI + K E+ D G ++ R + Y HNYG P+T
Sbjct: 42 IFNMVVEIPRWTNAKLEITREETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWE 101
Query: 64 E------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD 111
+ D+DP+DVL + + G + +A+G+M ++D+GE D K+IA+ +
Sbjct: 102 DPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 161
Query: 112 D---PEFRHYKDIKELPPHRLAEIRRFFEDYK----KNENKKVDVEDFLPAEAAIEAIKY 164
D P+ +D+++ P L +F YK K EN+ + + A++ IK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKE 221
Query: 165 SMDLYASYIV 174
+ D + I
Sbjct: 222 THDSWKQLIA 231
>pdb|1HUK|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And
Its K61r Mutant
pdb|1HUK|B Chain B, Refined Structure Of Yeast Inorganic Pyrophosphatase And
Its K61r Mutant
Length = 281
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 15 VCNCVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTIC 63
+ N VVEI + K E+ D G ++ R + Y HNYG P+T
Sbjct: 42 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWE 101
Query: 64 E------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD 111
+ D+DP+DVL + + G + +A+G+M ++D+GE D K+IA+ +
Sbjct: 102 DPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 161
Query: 112 D---PEFRHYKDIKELPPHRLAEIRRFFEDYK----KNENKKVDVEDFLPAEAAIEAIKY 164
D P+ +D+++ P L +F YK K EN+ + + A++ IK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKE 221
Query: 165 SMDLYASYIV 174
+ D + I
Sbjct: 222 THDSWKQLIA 231
>pdb|1WGI|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1WGI|B Chain B, Structure Of Inorganic Pyrophosphatase
pdb|1WGJ|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1WGJ|B Chain B, Structure Of Inorganic Pyrophosphatase
pdb|1E6A|A Chain A, Fluoride-Inhibited Substrate Complex Of Saccharomyces
Cerevisiae Inorganic Pyrophosphatase
pdb|1E6A|B Chain B, Fluoride-Inhibited Substrate Complex Of Saccharomyces
Cerevisiae Inorganic Pyrophosphatase
pdb|2IHP|A Chain A, Yeast Inorganic Pyrophosphatase With Magnesium And
Phosphate
pdb|2IHP|B Chain B, Yeast Inorganic Pyrophosphatase With Magnesium And
Phosphate
pdb|1E9G|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1E9G|B Chain B, Structure Of Inorganic Pyrophosphatase
Length = 286
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 15 VCNCVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTIC 63
+ N VVEI + K E+ D G ++ R + Y HNYG P+T
Sbjct: 42 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWE 101
Query: 64 E------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD 111
+ D+DP+DVL + + G + +A+G+M ++D+GE D K+IA+ +
Sbjct: 102 DPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 161
Query: 112 D---PEFRHYKDIKELPPHRLAEIRRFFEDYK----KNENKKVDVEDFLPAEAAIEAIKY 164
D P+ +D+++ P L +F YK K EN+ + + A++ IK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKE 221
Query: 165 SMDLYASYIV 174
+ D + I
Sbjct: 222 THDSWKQLIA 231
>pdb|1M38|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1M38|B Chain B, Structure Of Inorganic Pyrophosphatase
Length = 287
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 15 VCNCVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTIC 63
+ N VVEI + K E+ D G ++ R + Y HNYG P+T
Sbjct: 43 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWE 102
Query: 64 E------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD 111
+ D+DP+DVL + + G + +A+G+M ++D+GE D K+IA+ +
Sbjct: 103 DPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 162
Query: 112 D---PEFRHYKDIKELPPHRLAEIRRFFEDYK----KNENKKVDVEDFLPAEAAIEAIKY 164
D P+ +D+++ P L +F YK K EN+ + + A++ IK
Sbjct: 163 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKE 222
Query: 165 SMDLYASYIV 174
+ D + I
Sbjct: 223 THDSWKQLIA 232
>pdb|2IK1|A Chain A, Yeast Inorganic Pyrophosphatase Variant Y93f With
Magnesium And Phosphate
pdb|2IK1|B Chain B, Yeast Inorganic Pyrophosphatase Variant Y93f With
Magnesium And Phosphate
Length = 286
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 15 VCNCVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTIC 63
+ N VVEI + K E+ D G ++ R + Y HN+G P+T
Sbjct: 42 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNFGAFPQTWE 101
Query: 64 E------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD 111
+ D+DP+DVL + + G + +A+G+M ++D+GE D K+IA+ +
Sbjct: 102 DPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 161
Query: 112 D---PEFRHYKDIKELPPHRLAEIRRFFEDYK----KNENKKVDVEDFLPAEAAIEAIKY 164
D P+ +D+++ P L +F YK K EN+ + + A++ IK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKE 221
Query: 165 SMDLYASYIV 174
+ D + I
Sbjct: 222 THDSWKQLIA 231
>pdb|2IK7|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120n With
Magnesium And Phosphate
pdb|2IK7|B Chain B, Yeast Inorganic Pyrophosphatase Variant D120n With
Magnesium And Phosphate
Length = 286
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 15 VCNCVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTIC 63
+ N VVEI + K E+ D G ++ R + Y HNYG P+T
Sbjct: 42 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWE 101
Query: 64 E------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD 111
+ D+DP++VL + + G + +A+G+M ++D+GE D K+IA+ +
Sbjct: 102 DPNVSHPETKAVGDNDPINVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 161
Query: 112 D---PEFRHYKDIKELPPHRLAEIRRFFEDYK----KNENKKVDVEDFLPAEAAIEAIKY 164
D P+ +D+++ P L +F YK K EN+ + + A++ IK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKE 221
Query: 165 SMDLYASYIV 174
+ D + I
Sbjct: 222 THDSWKQLIA 231
>pdb|2IK0|A Chain A, Yeast Inorganic Pyrophosphatase Variant E48d With
Magnesium And Phosphate
pdb|2IK0|B Chain B, Yeast Inorganic Pyrophosphatase Variant E48d With
Magnesium And Phosphate
Length = 286
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 15 VCNCVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTIC 63
+ N VV+I + K E+ D G ++ R + Y HNYG P+T
Sbjct: 42 IFNMVVDIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWE 101
Query: 64 E------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD 111
+ D+DP+DVL + + G + +A+G+M ++D+GE D K+IA+ +
Sbjct: 102 DPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 161
Query: 112 D---PEFRHYKDIKELPPHRLAEIRRFFEDYK----KNENKKVDVEDFLPAEAAIEAIKY 164
D P+ +D+++ P L +F YK K EN+ + + A++ IK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKE 221
Query: 165 SMDLYASYIV 174
+ D + I
Sbjct: 222 THDSWKQLIA 231
>pdb|117E|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces
Cerevisiae Soluble Inorganic Pyrophosphatase: Structural
Studies And Mechanistic Implications
pdb|117E|B Chain B, The R78k And D117e Active Site Variants Of Saccharomyces
Cerevisiae Soluble Inorganic Pyrophosphatase: Structural
Studies And Mechanistic Implications
pdb|2IK4|A Chain A, Yeast Inorganic Pyrophosphatase Variant D117e With
Magnesium And Phosphate
pdb|2IK4|B Chain B, Yeast Inorganic Pyrophosphatase Variant D117e With
Magnesium And Phosphate
Length = 286
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 15 VCNCVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTIC 63
+ N VVEI + K E+ D G ++ R + Y HNYG P+T
Sbjct: 42 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWE 101
Query: 64 E------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD 111
+ D++P+DVL + + G + +A+G+M ++D+GE D K+IA+ +
Sbjct: 102 DPNVSHPETKAVGDNEPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 161
Query: 112 D---PEFRHYKDIKELPPHRLAEIRRFFEDYK----KNENKKVDVEDFLPAEAAIEAIKY 164
D P+ +D+++ P L +F YK K EN+ + + A++ IK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKE 221
Query: 165 SMDLYASYIV 174
+ D + I
Sbjct: 222 THDSWKQLIA 231
>pdb|2IK6|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120e With
Magnesium And Phosphate
pdb|2IK6|B Chain B, Yeast Inorganic Pyrophosphatase Variant D120e With
Magnesium And Phosphate
Length = 286
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 15 VCNCVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTIC 63
+ N VVEI + K E+ D G ++ R + Y HNYG P+T
Sbjct: 42 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWE 101
Query: 64 E------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD 111
+ D+DP++VL + + G + +A+G+M ++D+GE D K+IA+ +
Sbjct: 102 DPNVSHPETKAVGDNDPIEVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 161
Query: 112 D---PEFRHYKDIKELPPHRLAEIRRFFEDYK----KNENKKVDVEDFLPAEAAIEAIKY 164
D P+ +D+++ P L +F YK K EN+ + + A++ IK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKE 221
Query: 165 SMDLYASYIV 174
+ D + I
Sbjct: 222 THDSWKQLIA 231
>pdb|2IK9|A Chain A, Yeast Inorganic Pyrophosphatase Variant D152e With
Magnesium And Phosphate
pdb|2IK9|B Chain B, Yeast Inorganic Pyrophosphatase Variant D152e With
Magnesium And Phosphate
Length = 286
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 15 VCNCVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTIC 63
+ N VVEI + K E+ D G ++ R + Y HNYG P+T
Sbjct: 42 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWE 101
Query: 64 E------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD 111
+ D+DP+DVL + + G + +A+G+M ++D+GE + K+IA+ +
Sbjct: 102 DPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETEWKVIAIDIN 161
Query: 112 D---PEFRHYKDIKELPPHRLAEIRRFFEDYK----KNENKKVDVEDFLPAEAAIEAIKY 164
D P+ +D+++ P L +F YK K EN+ + + A++ IK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKE 221
Query: 165 SMDLYASYIV 174
+ D + I
Sbjct: 222 THDSWKQLIA 231
>pdb|2IK2|A Chain A, Yeast Inorganic Pyrophosphatase Variant D115e With
Magnesium And Phosphate
pdb|2IK2|B Chain B, Yeast Inorganic Pyrophosphatase Variant D115e With
Magnesium And Phosphate
Length = 286
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 15 VCNCVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTIC 63
+ N VVEI + K E+ D G ++ R + Y HNYG P+T
Sbjct: 42 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWE 101
Query: 64 E------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD 111
+ ++DP+DVL + + G + +A+G+M ++D+GE D K+IA+ +
Sbjct: 102 DPNVSHPETKAVGENDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 161
Query: 112 D---PEFRHYKDIKELPPHRLAEIRRFFEDYK----KNENKKVDVEDFLPAEAAIEAIKY 164
D P+ +D+++ P L +F YK K EN+ + + A++ IK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKE 221
Query: 165 SMDLYASYIV 174
+ D + I
Sbjct: 222 THDSWKQLIA 231
>pdb|1PYP|A Chain A, X-Ray Diffraction Study Of Inorganic Pyrophosphatase From
Baker,S Yeast At The 3 Angstroms Resolution (Russian)
pdb|1PYP|B Chain B, X-Ray Diffraction Study Of Inorganic Pyrophosphatase From
Baker,S Yeast At The 3 Angstroms Resolution (Russian)
Length = 285
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 25/151 (16%)
Query: 15 VCNCVVEIGKGGKVKYELDK----------ASGLIKVDRVLYSSVVYPHNYGFIPRTICE 64
+ N VVEI + K E+ K G ++ R + Y HNYG P+T +
Sbjct: 42 IFNMVVEIPRWTNAKLEITKEETLNPIIQNTKGKLRFVRNCFPHHGYIHNYGAFPQTWED 101
Query: 65 ------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD 112
D++P+DVL + + G +A+G+M ++D+GE D K+IA+ +D
Sbjct: 102 PNVSHPETKAVGDNNPIDVLQIGETIAYTGQVKEVKALGIMALLDEGETDWKVIAIDIND 161
Query: 113 ---PEFRHYKDIKELPPHRLAEIRRFFEDYK 140
P+ +D+++ P L +F YK
Sbjct: 162 PLAPKLNDIEDVEKYFPGLLRATDEWFRIYK 192
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 31.2 bits (69), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 132 IRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLYASYI 173
+ RFFE +N++ V +E+FL A E I SM L+ + I
Sbjct: 59 VERFFEKMDRNQDGVVTIEEFLEACQKDENIMSSMQLFENVI 100
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 29.6 bits (65), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 116 RH-YKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAIKYSMDLYASYI 173
RH Y ++E P L + RFF+ +N++ V +++FL E I SM L+ + I
Sbjct: 200 RHTYPILREDAP--LEHVERFFQKMDRNQDGVVTIDEFLETCQKDENIMNSMQLFENVI 256
>pdb|1CKV|A Chain A, Structure Of The Soluble Methane Monooxygenase Regulatory
Protein B
pdb|4GAM|D Chain D, Complex Structure Of Methane Monooxygenase Hydroxylase And
Regulatory Subunit
pdb|4GAM|I Chain I, Complex Structure Of Methane Monooxygenase Hydroxylase And
Regulatory Subunit
pdb|4GAM|N Chain N, Complex Structure Of Methane Monooxygenase Hydroxylase And
Regulatory Subunit
pdb|4GAM|S Chain S, Complex Structure Of Methane Monooxygenase Hydroxylase And
Regulatory Subunit
Length = 141
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 10/61 (16%)
Query: 110 ADDPEFRHYKDIKELPPHRLAEIRRFFE-----DYKKNENKKVDVED-----FLPAEAAI 159
AD+ + H D L + EI F E DYKKN N V+VED ++ A I
Sbjct: 26 ADENQVVHESDTVVLVLKKSDEINTFIEEILLTDYKKNVNPTVNVEDRAGYWWIKANGKI 85
Query: 160 E 160
E
Sbjct: 86 E 86
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 28.5 bits (62), Expect = 2.0, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 31 ELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLV 73
E A+G+++ D SS+ P + G PR CED +P+ LV
Sbjct: 339 EAANATGILRYDS---SSIANPTSVGTTPRGTCED-EPVASLV 377
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 28.5 bits (62), Expect = 2.0, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 31 ELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLV 73
E A+G+++ D SS+ P + G PR CED +P+ LV
Sbjct: 339 EAANATGILRYDS---SSIANPTSVGTTPRGTCED-EPVASLV 377
>pdb|4E8W|A Chain A, Crystal Structure Of Burkholderia Cenocepacia Hlda In
Complex With An Atp-Competitive Inhibitor
pdb|4E8W|B Chain B, Crystal Structure Of Burkholderia Cenocepacia Hlda In
Complex With An Atp-Competitive Inhibitor
pdb|4E8Y|A Chain A, Crystal Structure Of Burkholderia Cenocepacia Hlda In
Complex With An Atp-Competitive Inhibitor
pdb|4E8Y|B Chain B, Crystal Structure Of Burkholderia Cenocepacia Hlda In
Complex With An Atp-Competitive Inhibitor
pdb|4E8Z|A Chain A, Crystal Structure Of Burkholderia Cenocepacia Hlda In
Complex With An Atp-Competitive Inhibitor
pdb|4E8Z|B Chain B, Crystal Structure Of Burkholderia Cenocepacia Hlda In
Complex With An Atp-Competitive Inhibitor
Length = 352
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 70 DVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRL 129
DVL+ + VL + + + MI++ K + V ++ Y+ + P+R
Sbjct: 181 DVLLPQHDVVLMSDYAKGGLTHVTTMIEKARAAGKAVLVDPKGDDWARYRGASLITPNR- 239
Query: 130 AEIRRFFEDYKKNENKKVDVEDFLPAEAAIEAI 162
AE+R +K ++ + V + L AE I+A+
Sbjct: 240 AELREVVGQWKSEDDLRARVAN-LRAELDIDAL 271
>pdb|1KFW|A Chain A, Structure Of Catalytic Domain Of Psychrophilic Chitinase B
From Arthrobacter Tad20
Length = 435
Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 129 LAEIRRFFEDYKKNENKKVDVEDFLPAEAA 158
LAE R+ + Y NKK + FLPA A
Sbjct: 209 LAEFRKQLDAYGSTNNKKYVLSAFLPANPA 238
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.142 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,863,725
Number of Sequences: 62578
Number of extensions: 253451
Number of successful extensions: 705
Number of sequences better than 100.0: 55
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 624
Number of HSP's gapped (non-prelim): 58
length of query: 179
length of database: 14,973,337
effective HSP length: 93
effective length of query: 86
effective length of database: 9,153,583
effective search space: 787208138
effective search space used: 787208138
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (23.1 bits)