Your job contains 1 sequence.
>030341
MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL
GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG
GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030341
(179 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2025232 - symbol:AT1G76940 species:3702 "Arabi... 327 1.6e-29 1
TAIR|locus:2014937 - symbol:AT1G21320 species:3702 "Arabi... 322 5.6e-29 1
RGD|1561067 - symbol:Rbpms "RNA binding protein with mult... 88 0.00062 1
>TAIR|locus:2025232 [details] [associations]
symbol:AT1G76940 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 InterPro:IPR024888 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0000398 GO:GO:0017069 PANTHER:PTHR10501
EMBL:BT029526 IPI:IPI00547369 RefSeq:NP_177820.2 UniGene:At.45990
ProteinModelPortal:A1A6K6 SMR:A1A6K6 PaxDb:A1A6K6 PRIDE:A1A6K6
EnsemblPlants:AT1G76940.1 GeneID:844029 KEGG:ath:AT1G76940
TAIR:At1g76940 eggNOG:NOG274612 HOGENOM:HOG000116598
InParanoid:A1A6K6 OMA:DPIVLCF PhylomeDB:A1A6K6
ProtClustDB:CLSN2680654 Genevestigator:A1A6K6 Uniprot:A1A6K6
Length = 233
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 87/186 (46%), Positives = 113/186 (60%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPS-----GHELSSYYTRDDDRGALRGMR 55
MADGYW + RQ Q P KRPR+D++ PS GH YY RD+D +
Sbjct: 1 MADGYW--NQQRQ-QHHPPGGPMKRPRSDFEAPSSTMTIGHG-GGYYPRDEDLD----VP 52
Query: 56 DTDSLGASYDRYLRSAQIS---SYSGGQSARHMSGGMPS-RPVDD--PRIVGIGGMDPGP 109
DT ++G++YDRYL+S Q S S G+S GG + + +DD R G+ +D GP
Sbjct: 53 DTRTIGSAYDRYLQSVQSGEGGSVSMGRSGGGGGGGGGNVQTIDDFMLRRGGVLPLDHGP 112
Query: 110 SAKDRALGLGG----GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
+ +G GR LP DAS+TL+VEGLPS+CSRREVAHIFRPFVGY+EVRLV
Sbjct: 113 NG--HTIGFDPPEPVGRRN--LPSDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLV 168
Query: 166 SKESRH 171
+K+S+H
Sbjct: 169 TKDSKH 174
>TAIR|locus:2014937 [details] [associations]
symbol:AT1G21320 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 InterPro:IPR024888 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:CP002684 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0000398 GO:GO:0017069 InterPro:IPR008889 Pfam:PF05678
PANTHER:PTHR10501 IPI:IPI00517769 RefSeq:NP_173554.3
UniGene:At.64837 ProteinModelPortal:F4HWF9 SMR:F4HWF9 PRIDE:F4HWF9
EnsemblPlants:AT1G21320.1 GeneID:838729 KEGG:ath:AT1G21320
OMA:QNRGFER ArrayExpress:F4HWF9 Uniprot:F4HWF9
Length = 421
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 74/162 (45%), Positives = 102/162 (62%)
Query: 28 TDYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQ---ISS-----YSGG 79
T Y +PSG ++ SY ++D+DRG ++DT S+G++YDRYL+S Q + S ++G
Sbjct: 203 TPYLIPSG-DMHSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGV 261
Query: 80 QSARHMSGGMPSRPVDDPRIVGIGGMDPG---PSAKDRALG----LGG-GRSEVPLPPDA 131
R M P + G GG P P+ +D G +G GR PLPPD
Sbjct: 262 GMVRQGGSNMMPGPSMGELMAGCGGSLPSDFRPNGRDMGFGQLDSVGRPGREPHPLPPDV 321
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVS 173
S+TL+VEGLPS+CSRREV+HIFRPFVGY+EVRLV+++S+H S
Sbjct: 322 SNTLYVEGLPSNCSRREVSHIFRPFVGYREVRLVTQDSKHRS 363
>RGD|1561067 [details] [associations]
symbol:Rbpms "RNA binding protein with multiple splicing"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA;ISO] [GO:0008143 "poly(A) RNA binding"
evidence=IEA;ISO] [GO:0010862 "positive regulation of
pathway-restricted SMAD protein phosphorylation" evidence=IEA;ISO]
[GO:0060391 "positive regulation of SMAD protein import into
nucleus" evidence=IEA;ISO] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1561067
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00500000044861 IPI:IPI00959368
Ensembl:ENSRNOT00000068011 Uniprot:F2Z3S5
Length = 110
Score = 88 (36.0 bits), Expect = 0.00062, P = 0.00062
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKE--VRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 3 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 39
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.136 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 179 179 0.00089 109 3 11 22 0.45 32
31 0.39 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 568 (60 KB)
Total size of DFA: 145 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.47u 0.09s 19.56t Elapsed: 00:00:03
Total cpu time: 19.47u 0.09s 19.56t Elapsed: 00:00:03
Start: Mon May 20 17:03:14 2013 End: Mon May 20 17:03:17 2013