BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030341
(179 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255549562|ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223545062|gb|EEF46575.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 232
Score = 271 bits (693), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 138/171 (80%), Positives = 151/171 (88%), Gaps = 2/171 (1%)
Query: 1 MADGYWRYSDARQPQSA-LPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDS 59
MAD YWRYSDARQPQ +P+LV KR R+DYDV SGHEL +YYTRDDDRGALR +RDTDS
Sbjct: 1 MADAYWRYSDARQPQQQPIPTLVGKRSRSDYDVTSGHELPNYYTRDDDRGALRAIRDTDS 60
Query: 60 LGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLG 119
+GASYDRYLRSA ISSYSGGQSAR +SG +P+R DDPRI+GIGG+DPGP+ KDR LGLG
Sbjct: 61 IGASYDRYLRSAPISSYSGGQSARPISG-VPNRVADDPRIMGIGGLDPGPTVKDRTLGLG 119
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
GR E LPPDA+STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR
Sbjct: 120 SGRPETSLPPDATSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
>gi|427199356|gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
Length = 233
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/172 (77%), Positives = 150/172 (87%), Gaps = 1/172 (0%)
Query: 1 MADGYWRYSDARQPQ-SALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDS 59
MAD YWRY D+RQP +L +V KR R+DYDVPSGHEL SY++RDD+RG LRGMRDTDS
Sbjct: 1 MADAYWRYGDSRQPPPQSLTQIVGKRSRSDYDVPSGHELPSYFSRDDERGTLRGMRDTDS 60
Query: 60 LGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLG 119
+GASYDRYLRSAQ+SSY GGQSAR +SGGM SR VDDPRIVG+G ++P + KDR LG G
Sbjct: 61 IGASYDRYLRSAQVSSYGGGQSARPISGGMSSRAVDDPRIVGMGSVEPATTVKDRTLGYG 120
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GGR EVPLPPDASSTLFVEGLPS+C+RREVAHIFRPFVGYKEVRLVSKESRH
Sbjct: 121 GGRPEVPLPPDASSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRH 172
>gi|224118350|ref|XP_002317797.1| predicted protein [Populus trichocarpa]
gi|222858470|gb|EEE96017.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 248 bits (633), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 129/173 (74%), Positives = 147/173 (84%), Gaps = 3/173 (1%)
Query: 1 MADGYWRYS-DARQ-PQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTD 58
MAD YWRY+ D+RQ P ++ SL KRPR DYD+PSG +LSSYY+RDDDRGAL +RD+D
Sbjct: 1 MADSYWRYAGDSRQQPPQSMSSLTGKRPRIDYDIPSGRDLSSYYSRDDDRGALHVIRDSD 60
Query: 59 SLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGL 118
S+GASYDRYLRS +SSY GGQSAR MSG +PS PVDD R+V +G MDPG S KDR+L +
Sbjct: 61 SIGASYDRYLRSGTVSSYGGGQSARAMSG-VPSHPVDDTRMVSMGPMDPGASVKDRSLRM 119
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
G GRSEV LPPDASSTLFVEGLPSDC+RREV+HIFRPFVGYKEVRLVSKESRH
Sbjct: 120 GSGRSEVSLPPDASSTLFVEGLPSDCTRREVSHIFRPFVGYKEVRLVSKESRH 172
>gi|302143942|emb|CBI23047.3| unnamed protein product [Vitis vinifera]
Length = 230
Score = 238 bits (607), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 117/171 (68%), Positives = 144/171 (84%), Gaps = 2/171 (1%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
MAD YWRY + RQP +PSL +KRPR+DYDVP GH+L SY++R+D+R A R +RD+DS+
Sbjct: 1 MADPYWRYGEVRQP-PPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSI 59
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
GASYDRYLR+AQ+ SY GG S R +SGG+ S PVDDPR+VG+ G+D G + K ++LG G
Sbjct: 60 GASYDRYLRNAQMPSY-GGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSG 118
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GR E+PLPPDASSTLFVEGLP++C+RREV+HIFRPFVGYKEVRLVSKESRH
Sbjct: 119 GRPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRH 169
>gi|359490723|ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
Length = 229
Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 116/171 (67%), Positives = 143/171 (83%), Gaps = 3/171 (1%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
MAD YWRY + RQP +PSL +KRPR+DYDVP GH+L SY++R+D+R A R +RD+DS+
Sbjct: 1 MADPYWRYGEVRQP-PPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSI 59
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
GASYDRYLR+A + SY GG S R +SGG+ S PVDDPR+VG+ G+D G + K ++LG G
Sbjct: 60 GASYDRYLRNA-MPSY-GGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSG 117
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GR E+PLPPDASSTLFVEGLP++C+RREV+HIFRPFVGYKEVRLVSKESRH
Sbjct: 118 GRPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRH 168
>gi|224135091|ref|XP_002321981.1| predicted protein [Populus trichocarpa]
gi|222868977|gb|EEF06108.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 123/172 (71%), Positives = 138/172 (80%), Gaps = 14/172 (8%)
Query: 1 MADGYWRYS-DARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDS 59
MAD YWRY+ D+RQPQ L DVPSG +LSSYY+RDDDRGALR +RD+DS
Sbjct: 1 MADSYWRYAGDSRQPQPHL------------DVPSGRDLSSYYSRDDDRGALRVIRDSDS 48
Query: 60 LGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLG 119
+GASYDRYL S ISSY GGQSAR +SG +P RPVDD R+V +G MDPG S KDR++ G
Sbjct: 49 IGASYDRYLHSGTISSYGGGQSARAISG-VPVRPVDDLRMVSMGSMDPGSSVKDRSMRTG 107
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GRSEV LPPDASSTLFVEGLPSDC+RREV+HIFRPFVGYKEVRLVSKESRH
Sbjct: 108 SGRSEVSLPPDASSTLFVEGLPSDCTRREVSHIFRPFVGYKEVRLVSKESRH 159
>gi|449456997|ref|XP_004146235.1| PREDICTED: uncharacterized protein LOC101218789 [Cucumis sativus]
gi|449529543|ref|XP_004171759.1| PREDICTED: uncharacterized protein LOC101224897 [Cucumis sativus]
Length = 232
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 107/171 (62%), Positives = 135/171 (78%), Gaps = 2/171 (1%)
Query: 1 MADGYWRYSDARQ-PQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDS 59
M+D YWRY+D++Q P S++P +V KRPR DYD HEL +YY R DDR L+G++ DS
Sbjct: 1 MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTSGLHELPNYYPRQDDRPVLQGIKSVDS 60
Query: 60 LGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLG 119
+ SY+RYLR++QISSY GGQSAR + GG+P P++DP I+G+GG+ G + DR+ G
Sbjct: 61 INESYERYLRTSQISSY-GGQSARPVGGGVPGHPMNDPPILGLGGVVSGANVNDRSTSFG 119
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
GGR +PLPPDAS+TLFVEGLPS C+RREVAHIFRPFVGYKEVRLV+KESR
Sbjct: 120 GGRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESR 170
>gi|363807818|ref|NP_001241926.1| uncharacterized protein LOC100786188 [Glycine max]
gi|255640386|gb|ACU20480.1| unknown [Glycine max]
Length = 230
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/171 (62%), Positives = 131/171 (76%), Gaps = 2/171 (1%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M+D YWRY A + + A S+ KR R+DYDV H+L SY+ DDDRG LR +RDT+SL
Sbjct: 1 MSDAYWRY--AAESRQAPSSIAGKRSRSDYDVSGVHDLPSYFPHDDDRGGLRVIRDTESL 58
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
ASY+RYLRSAQ+SSY GQS R + G +P+R +DD + IGG+D G +AKD+ GL
Sbjct: 59 DASYERYLRSAQVSSYGSGQSTRTIDGRIPNRAIDDSHVANIGGVDRGTNAKDKMPGLSS 118
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GR++ LPPDA+STLFVEGLPS+C+RREVAHIFRPFVGYKEVRLVSKESR
Sbjct: 119 GRADHSLPPDATSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRQ 169
>gi|363818125|ref|NP_001242627.1| uncharacterized protein LOC100800440 [Glycine max]
gi|255644702|gb|ACU22853.1| unknown [Glycine max]
Length = 230
Score = 211 bits (538), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 106/171 (61%), Positives = 130/171 (76%), Gaps = 2/171 (1%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M+D YWRY A + + A S+ KR R+DYDV H+L Y+ DDDRG LR +RDT+SL
Sbjct: 1 MSDAYWRY--AAESRQAPSSIAGKRSRSDYDVSGVHDLPGYFPHDDDRGGLRVIRDTESL 58
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
ASY+RYLRSAQ+SSY GQS R +SG +P+R +DD + IGG+D G +AKD+ LGL
Sbjct: 59 DASYERYLRSAQVSSYGSGQSTRTISGRIPNRAIDDSHVANIGGIDRGTNAKDKMLGLSS 118
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GR++ LPPDA+STLFVEGLP +C+RREVAHIF PFVGYKEVRLVSKESR
Sbjct: 119 GRTDHSLPPDATSTLFVEGLPPNCTRREVAHIFPPFVGYKEVRLVSKESRQ 169
>gi|388505956|gb|AFK41044.1| unknown [Lotus japonicus]
Length = 232
Score = 208 bits (529), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 130/172 (75%), Gaps = 4/172 (2%)
Query: 1 MADGYWRYS-DARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDS 59
M+D YWRY+ ++R SA+ +KR R+DYDV H++ YY DDDRG LR +RDT+S
Sbjct: 1 MSDAYWRYAAESRHNPSAI---AAKRARSDYDVSGVHDMPGYYPHDDDRGGLRVIRDTES 57
Query: 60 LGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLG 119
L ASY+RYLRSAQ+SS+ GQS R + G +PS DD + IGG+D GPSAK++ LGL
Sbjct: 58 LDASYERYLRSAQVSSFGEGQSTRTIRGRLPSHSFDDSHVTSIGGVDRGPSAKEKILGLS 117
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GR + LPPDA+STLFVEGLP++C RREVAHIFRPFVGYKEVRLVSKESR
Sbjct: 118 SGRPDHSLPPDATSTLFVEGLPTNCPRREVAHIFRPFVGYKEVRLVSKESRQ 169
>gi|357464013|ref|XP_003602288.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355491336|gb|AES72539.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 243
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/170 (59%), Positives = 131/170 (77%), Gaps = 3/170 (1%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M+D YWRY++++Q A P++ KRPRT+YDV H L++Y+ DDDRG L+ +RDT+SL
Sbjct: 1 MSDAYWRYAESQQ--HAPPTIPGKRPRTEYDVSGVHNLANYFPHDDDRGRLQVIRDTESL 58
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
ASY+RYLR+A ISS+ GQS R + GG+PS +DD + +GG+D + KD+ L L G
Sbjct: 59 DASYERYLRNA-ISSHGSGQSTRTIDGGVPSHSIDDSHVTSMGGVDRRTNVKDQILELSG 117
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
GR + LPP A++TLFVEGLPS+C+RREVAHIFRPFVGYKEVRLVSKESR
Sbjct: 118 GRPDHSLPPGATNTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESR 167
>gi|388504624|gb|AFK40378.1| unknown [Medicago truncatula]
Length = 228
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/170 (58%), Positives = 130/170 (76%), Gaps = 3/170 (1%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M+D YWRY++++Q A P++ KRPRT+YDV H L++Y+ DDDRG L+ +RDT+SL
Sbjct: 1 MSDAYWRYAESQQ--HAPPTIPGKRPRTEYDVSGVHNLANYFPHDDDRGRLQVIRDTESL 58
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
ASY+RYLR+A ISS+ GQS R + GG+PS +DD + +GG+D + K + L L G
Sbjct: 59 DASYERYLRNA-ISSHGSGQSTRTIDGGVPSHSIDDSHVTSMGGVDRRTNVKGQILELSG 117
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
GR + LPP A++TLFVEGLPS+C+RREVAHIFRPFVGYKEVRLVSKESR
Sbjct: 118 GRPDHSLPPGATNTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESR 167
>gi|357464011|ref|XP_003602287.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355491335|gb|AES72538.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 258
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 130/176 (73%), Gaps = 8/176 (4%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M+D YWRY++++Q A P++ KRPRT+YDV H L++Y+ DDDRG L+ +RDT+SL
Sbjct: 1 MSDAYWRYAESQQ--HAPPTIPGKRPRTEYDVSGVHNLANYFPHDDDRGRLQVIRDTESL 58
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
ASY+RYLR+A ISS+ GQS R + GG+PS +DD + +GG+D + KD+ L L G
Sbjct: 59 DASYERYLRNA-ISSHGSGQSTRTIDGGVPSHSIDDSHVTSMGGVDRRTNVKDQILELSG 117
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAH-----IFRPFVGYKEVRLVSKESRH 171
GR + LPP A++TLFVEGLPS+C+RREVA IFRPFVGYKEVRLVSKESR
Sbjct: 118 GRPDHSLPPGATNTLFVEGLPSNCTRREVARILSSDIFRPFVGYKEVRLVSKESRQ 173
>gi|374256077|gb|AEZ00900.1| putative RNA recognition motif-containing protein, partial [Elaeis
guineensis]
Length = 294
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 101/187 (54%), Positives = 131/187 (70%), Gaps = 18/187 (9%)
Query: 1 MADGYWRYSDARQPQSALPSLVS--KRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDT 57
MAD YWRYSD R +A+ + + KRPR DY D+P G E+ YY+RD++R R +RDT
Sbjct: 35 MADAYWRYSDPRHQAAAMAAPTAPLKRPRADYADIPGGPEVLGYYSRDEERTGHRTIRDT 94
Query: 58 DSLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMD----------- 106
+S+ ASYDRYLR+ S+ G+S R ++GGM PVDD R++G+GGMD
Sbjct: 95 ESIAASYDRYLRNG--VSFGAGESVRTVAGGMTGHPVDDRRMMGVGGMDGRTVGYGGGRP 152
Query: 107 --PGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
P R++G GGGR E PLP DAS+TLFVEGLP++C+RREV+HIFRPFVG++EVRL
Sbjct: 153 EPPLGGMDGRSVGYGGGRPEPPLPQDASNTLFVEGLPANCTRREVSHIFRPFVGFREVRL 212
Query: 165 VSKESRH 171
V+KESRH
Sbjct: 213 VNKESRH 219
>gi|222634881|gb|EEE65013.1| hypothetical protein OsJ_19964 [Oryza sativa Japonica Group]
Length = 265
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 110/157 (70%), Gaps = 15/157 (9%)
Query: 24 KRPR-TDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGG-- 79
KRPR D+ DVP E++ YY+RD++R R RDT++L ASY+R+LR+ QI SY G
Sbjct: 51 KRPRPADFSDVPGAPEMAGYYSRDEERPGYRPARDTEALNASYERFLRTGQIQSYGAGAG 110
Query: 80 -----QSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASST 134
+S R +GG PV+D ++ GGM+ R +G GGG E PLPPDAS+T
Sbjct: 111 AGPGAESIRPAAGGNAGYPVEDRPMMAGGGME------ARNIGFGGGMPEPPLPPDASNT 164
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
LF+EG+P+DC+RREV+HIFRPFVG++EVRLVSKE+RH
Sbjct: 165 LFIEGIPTDCARREVSHIFRPFVGFREVRLVSKEARH 201
>gi|449462154|ref|XP_004148806.1| PREDICTED: uncharacterized protein LOC101222348 isoform 1 [Cucumis
sativus]
gi|449462156|ref|XP_004148807.1| PREDICTED: uncharacterized protein LOC101222348 isoform 2 [Cucumis
sativus]
Length = 257
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 124/204 (60%), Gaps = 41/204 (20%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVP-----SGHELSSYYTRDDDRGALRGMR 55
MAD YW + +QP P+++ KRPRTDY++P +GH++ +Y T DDRG R ++
Sbjct: 1 MADDYW---NRQQPLLPSPAML-KRPRTDYELPASGLSTGHDMHNYLT-SDDRGGPRSVK 55
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKD-- 113
DT ++G++YDRYL+S Q+SS++ G+ H GM RPV + + +G PGP D
Sbjct: 56 DTQTIGSAYDRYLQSVQLSSFTSGEVPTHGEMGM-GRPVAN--RMPVGNRMPGPLLPDPI 112
Query: 114 ----------------RALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRR 147
R L G GR VPLPPDAS+TL+VEGLP D SRR
Sbjct: 113 VMSRPPAVSPDLAPNGRNLEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRR 172
Query: 148 EVAHIFRPFVGYKEVRLVSKESRH 171
EVAHIFRPFVGYKE+RLVSKES+H
Sbjct: 173 EVAHIFRPFVGYKELRLVSKESKH 196
>gi|223973687|gb|ACN31031.1| unknown [Zea mays]
Length = 221
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 111/166 (66%), Gaps = 16/166 (9%)
Query: 24 KRPR-TDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQS 81
KRPR T++ DVP + + YY RD++R R RDT+SL ASY+R+LR+ QI S+ GG +
Sbjct: 12 KRPRPTEFSDVPGAPDTAGYYPRDEERAGYRAARDTESLNASYERFLRTGQIQSFGGGHA 71
Query: 82 A---RHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVE 138
R GG + PVDD ++ GMD R +G GG E PLPPDAS+TL++E
Sbjct: 72 GEPIRPAVGGNAAYPVDDRSMMAARGMD------SRNIGFVGGMPEPPLPPDASNTLYIE 125
Query: 139 GLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH-----VSMIFLLF 179
G+PSDC+RREV+HIFRPFVG++EVRLV+KE +H + + F+ F
Sbjct: 126 GVPSDCTRREVSHIFRPFVGFREVRLVNKEPKHPGGDPIVLCFVDF 171
>gi|413953430|gb|AFW86079.1| hypothetical protein ZEAMMB73_802063 [Zea mays]
Length = 262
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 111/166 (66%), Gaps = 16/166 (9%)
Query: 24 KRPR-TDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQS 81
KRPR T++ DVP + + YY RD++R R RDT+SL ASY+R+LR+ QI S+ GG +
Sbjct: 53 KRPRPTEFSDVPGAPDTAGYYPRDEERAGYRAARDTESLNASYERFLRTGQIQSFGGGHA 112
Query: 82 A---RHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVE 138
R GG + PVDD ++ GMD R +G GG E PLPPDAS+TL++E
Sbjct: 113 GEPIRPAVGGNAAYPVDDRSMMAARGMD------SRNIGFVGGMPEPPLPPDASNTLYIE 166
Query: 139 GLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH-----VSMIFLLF 179
G+PSDC+RREV+HIFRPFVG++EVRLV+KE +H + + F+ F
Sbjct: 167 GVPSDCTRREVSHIFRPFVGFREVRLVNKEPKHPGGDPIVLCFVDF 212
>gi|242091796|ref|XP_002436388.1| hypothetical protein SORBIDRAFT_10g001660 [Sorghum bicolor]
gi|241914611|gb|EER87755.1| hypothetical protein SORBIDRAFT_10g001660 [Sorghum bicolor]
Length = 266
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 110/166 (66%), Gaps = 16/166 (9%)
Query: 24 KRPR-TDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGG-- 79
KRPR D+ DVP +++ YY RD++R R RDT++L ASY+R+LR+ QI S+ GG
Sbjct: 56 KRPRPADFSDVPGAPDMTGYYPRDEERAGYRPARDTEALNASYERFLRTGQIQSFGGGPA 115
Query: 80 -QSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVE 138
+ R GG PVDD ++ GMD R +G GGG E PLPPDAS+TL++E
Sbjct: 116 GEPIRPAVGGNAGYPVDDRSMMAARGMD------SRNIGFGGGMPEPPLPPDASNTLYIE 169
Query: 139 GLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH-----VSMIFLLF 179
G+P+ C+RREV+HIFRPFVG++EVRLV+KE +H + + F+ F
Sbjct: 170 GIPTGCTRREVSHIFRPFVGFREVRLVNKEPKHPGGDPIVLCFVDF 215
>gi|449506960|ref|XP_004162895.1| PREDICTED: uncharacterized LOC101222348 isoform 1 [Cucumis sativus]
gi|449506964|ref|XP_004162896.1| PREDICTED: uncharacterized LOC101222348 isoform 2 [Cucumis sativus]
Length = 257
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 122/204 (59%), Gaps = 41/204 (20%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVP-----SGHELSSYYTRDDDRGALRGMR 55
MAD YW + +QP P+++ KRPRTDY++P +GH++ +Y T DDRG R ++
Sbjct: 1 MADDYW---NRQQPLLPSPAML-KRPRTDYELPASGLSTGHDMHNYLT-SDDRGGPRSVK 55
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKD-- 113
DT ++G++YDRYL+S Q+SS++ G+ H GM RPV + + + PGP D
Sbjct: 56 DTQTIGSAYDRYLQSVQLSSFTSGEVPTHGEMGM-GRPVAN--RMPVRNRMPGPLLPDPI 112
Query: 114 ----------------RALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRR 147
R L G GR VPLPPDAS+TL+VEGLP D SRR
Sbjct: 113 VMSRPPAVSPDLAPNGRNLEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRR 172
Query: 148 EVAHIFRPFVGYKEVRLVSKESRH 171
EVAHIFRPFVGYKE+R VSKES+H
Sbjct: 173 EVAHIFRPFVGYKELRFVSKESKH 196
>gi|388513795|gb|AFK44959.1| unknown [Lotus japonicus]
Length = 239
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 112/171 (65%), Gaps = 23/171 (13%)
Query: 24 KRPRTDYDVP-----SGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSG 78
KRPR+DYD+P SG+++++Y RDDDR R +RDT ++G++YDRYL+S Q+S+Y+
Sbjct: 8 KRPRSDYDMPASGLSSGNDINNYIVRDDDRTGPRMLRDTKTIGSTYDRYLQSGQLSAYTS 67
Query: 79 GQSAR-------HMSGGMPSRPVDDPRIVG-IGGMDPGPSAKDRALGLGG---------- 120
G+++ GG+P + D +G GG P + R GG
Sbjct: 68 GEASTIGGLGYARGPGGLPGHSLADHAAMGRHGGGGPDIAPNGRGFNYGGQPPVDSVSRP 127
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
G VPLPPDASSTL+VEGLPSD ++REVAHIFRPFVGY+EVRLV+KES+H
Sbjct: 128 GHETVPLPPDASSTLYVEGLPSDSTKREVAHIFRPFVGYREVRLVTKESKH 178
>gi|356576041|ref|XP_003556143.1| PREDICTED: uncharacterized protein LOC100812551 isoform 1 [Glycine
max]
Length = 252
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 122/195 (62%), Gaps = 28/195 (14%)
Query: 1 MADGYWRYSDARQPQSALPS-LVSKRPRTDYDV-PSG-----HELSSYYTRDDDRGALRG 53
M DG W RQ Q LPS + KRPRT+YD+ PSG +E+ +Y R+DD R
Sbjct: 1 MTDGSWN----RQQQPFLPSSAMLKRPRTEYDISPSGLTSGGNEMHNYIGRNDDHTGHRI 56
Query: 54 MRDTDSLGASYDRYLRSAQISSYSGGQSARHMS-------GGMPSRPVDDPRIVGIGGMD 106
++DT +LG+++DRYL+SA ++S++ G+++ S GG+P + DP ++G G
Sbjct: 57 LKDTKTLGSAFDRYLQSAGLTSFNSGEASAIGSVGLERGVGGLPRHSLTDPAVMGHPGGG 116
Query: 107 PGPSAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
+ R + G G VPLPPDASSTL+VEGLPSD +RREVAHIFRPF
Sbjct: 117 HDLARGGRNVNYGDQLPVDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPF 176
Query: 157 VGYKEVRLVSKESRH 171
VGY+EVRLVSKES+H
Sbjct: 177 VGYREVRLVSKESKH 191
>gi|255637493|gb|ACU19073.1| unknown [Glycine max]
Length = 251
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 119/194 (61%), Gaps = 27/194 (13%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDV-PSG-----HELSSYYTRDDDRGALRGM 54
M DG+W P S + KRPRT+YD+ PSG +E+ +Y R+DD R +
Sbjct: 1 MTDGFWNRQQPLHPSSTM----LKRPRTEYDMSPSGLTSGGNEMHNYIARNDDHTGHRML 56
Query: 55 RDTDSLGASYDRYLRSAQISSYSGGQSARHMSGGM-------PSRPVDDPRIVGIGGMDP 107
+DT ++G++YDRYL+SA+++S++ G+++ G+ P + DP ++G G
Sbjct: 57 KDTKTIGSAYDRYLQSARLTSFNSGEASAVGGVGLGRGAGGLPHHSLTDPAVMGHPGGGH 116
Query: 108 GPSAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFV 157
+ R + GG G VPLPPDASSTL+VEGLPSD +RREVAHIFRPFV
Sbjct: 117 DHARNGRNVNYGGQLPLDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFV 176
Query: 158 GYKEVRLVSKESRH 171
GY+EVRLVSKES+H
Sbjct: 177 GYREVRLVSKESKH 190
>gi|356535806|ref|XP_003536434.1| PREDICTED: uncharacterized protein LOC100815695 [Glycine max]
Length = 251
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 118/194 (60%), Gaps = 27/194 (13%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDV-PSG-----HELSSYYTRDDDRGALRGM 54
M DG+W P S + KRPRT+YD+ PSG +E+ +Y R+DD R +
Sbjct: 1 MTDGFWNRQQPLHPSSTM----LKRPRTEYDMSPSGLTSGGNEMHNYIARNDDHTGHRML 56
Query: 55 RDTDSLGASYDRYLRSAQISSYSGGQSARHMSGGM-------PSRPVDDPRIVGIGGMDP 107
+DT ++G++YDRYL+SA ++S++ G+++ G+ P + DP ++G G
Sbjct: 57 KDTKTIGSAYDRYLQSAGLTSFNSGEASAVGGVGLGRGAGGLPHHSLTDPAVMGHPGGGH 116
Query: 108 GPSAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFV 157
+ R + GG G VPLPPDASSTL+VEGLPSD +RREVAHIFRPFV
Sbjct: 117 DHARNGRNVNYGGQLPLDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFV 176
Query: 158 GYKEVRLVSKESRH 171
GY+EVRLVSKES+H
Sbjct: 177 GYREVRLVSKESKH 190
>gi|326533746|dbj|BAK05404.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 263
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 119/215 (55%), Gaps = 44/215 (20%)
Query: 1 MADGYWRYSD----------ARQPQSALPSLVS------------KRPRT---DYDVPSG 35
MAD YWRY+D R P + P ++ KRPR D P
Sbjct: 1 MADAYWRYADLQRQQQQQQQMRTPSAGAPQSLTAAAAAAAGQQPLKRPRPGDHSADGPGA 60
Query: 36 HELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQS------ARHMSGGM 89
E++ YY RD++R +RDT +L ASY+R+LR+ QI S+ G + A +S G
Sbjct: 61 PEMAGYYPRDEERPGYAAVRDTQALNASYERFLRTGQIQSHGAGPAGGSVRPAAGVSAG- 119
Query: 90 PSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREV 149
DD + GGM+ R +G GGG E PLPPDAS+TLF+EG+P+DC RREV
Sbjct: 120 -GYQADDRPGMAAGGMN------GRNVGFGGGMPEPPLPPDASNTLFIEGIPTDCERREV 172
Query: 150 AHIFRPFVGYKEVRLVSKESRH-----VSMIFLLF 179
+HIFRPFVG++EVRLV+KE RH + + F+ F
Sbjct: 173 SHIFRPFVGFQEVRLVNKEPRHPGGDPIVLCFVDF 207
>gi|356576043|ref|XP_003556144.1| PREDICTED: uncharacterized protein LOC100812551 isoform 2 [Glycine
max]
Length = 244
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 119/190 (62%), Gaps = 26/190 (13%)
Query: 1 MADGYWRYSDARQPQSALPS-LVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDS 59
M DG W RQ Q LPS + KRPRT+Y G+E+ +Y R+DD R ++DT +
Sbjct: 1 MTDGSWN----RQQQPFLPSSAMLKRPRTEY---GGNEMHNYIGRNDDHTGHRILKDTKT 53
Query: 60 LGASYDRYLRSA-QISSYSGGQSARHMS-------GGMPSRPVDDPRIVGIGGMDPGPSA 111
LG+++DRYL+SA Q++S++ G+++ S GG+P + DP ++G G +
Sbjct: 54 LGSAFDRYLQSAGQLTSFNSGEASAIGSVGLERGVGGLPRHSLTDPAVMGHPGGGHDLAR 113
Query: 112 KDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKE 161
R + G G VPLPPDASSTL+VEGLPSD +RREVAHIFRPFVGY+E
Sbjct: 114 GGRNVNYGDQLPVDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFVGYRE 173
Query: 162 VRLVSKESRH 171
VRLVSKES+H
Sbjct: 174 VRLVSKESKH 183
>gi|255645608|gb|ACU23298.1| unknown [Glycine max]
Length = 242
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 116/189 (61%), Gaps = 26/189 (13%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M DGYW QS + KRPR+DY G+E+ + + RDDDR R ++DT ++
Sbjct: 1 MTDGYWNRQQTLLSQSGM----LKRPRSDY----GNEMHNNFARDDDRTGHRMLKDTKTI 52
Query: 61 GASYDRYLRSAQISSYSGGQSA-------RHMSGGMPSRPVDDPRIVG-IGGMDPGPSAK 112
G++YDRYL+S Q+SS++ G+++ GG+ + DP ++G GG P +
Sbjct: 53 GSAYDRYLQSGQLSSFTSGEASTVGGLGLARGGGGLSDHSLADPSVMGRHGGGGPDLAPN 112
Query: 113 DRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEV 162
R + GG G V LPPDASSTL+VEGLPSD +RREVAHIFRPFVGY+EV
Sbjct: 113 GRGVNYGGQLPVDAVSRPGPETVSLPPDASSTLYVEGLPSDSTRREVAHIFRPFVGYREV 172
Query: 163 RLVSKESRH 171
RLVSKES+H
Sbjct: 173 RLVSKESKH 181
>gi|356576045|ref|XP_003556145.1| PREDICTED: uncharacterized protein LOC100813445 isoform 1 [Glycine
max]
Length = 252
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 120/193 (62%), Gaps = 24/193 (12%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDV-PSG----HELSSYYTRDDDRGALRGMR 55
M DG+W + Q + L KRPRT+YD+ PSG +E+ +Y R+DD R ++
Sbjct: 1 MTDGFWNRQQQQPLQPSSAML--KRPRTEYDMSPSGLTGGNEMHNYIARNDDHTGHRMLK 58
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSA-------RHMSGGMPSRPVDDPRIVGIGGMDPG 108
DT +LG++YDRYL+SA ++S++ G+++ GG+P + DP ++G G
Sbjct: 59 DTKTLGSAYDRYLQSAGLTSFNSGEASAIGGVGLGRGVGGLPRHSLTDPAVMGHPGGGHD 118
Query: 109 PSAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVG 158
+ R + GG G VPLPPDASSTL+VEGLPSD +RREVAHIFRPFVG
Sbjct: 119 LARNGRNVNYGGQLTVDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFVG 178
Query: 159 YKEVRLVSKESRH 171
Y+EVRLVSKES+H
Sbjct: 179 YREVRLVSKESKH 191
>gi|255584574|ref|XP_002533013.1| conserved hypothetical protein [Ricinus communis]
gi|223527202|gb|EEF29367.1| conserved hypothetical protein [Ricinus communis]
Length = 1031
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 112/196 (57%), Gaps = 27/196 (13%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDV-----PSGHELSSYYTRDDDRGALRGMR 55
M DGYW + +Q KR R +YD+ PS HE+ +YY RDDDR + ++
Sbjct: 776 MTDGYWNHRHQQQHPLLQSGESLKRHRPEYDIASSGLPSSHEIHNYYPRDDDRERYQAVK 835
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSA-------RHMSGGMPSRPVDD---PRIVGIGGM 105
D+ ++G++YDRYL++AQI+ S G+++ R GGM P+ D R G
Sbjct: 836 DSKTIGSAYDRYLQNAQIAPLSSGEASGLSVGFGRASGGGMTGLPILDSGMARRARPSGQ 895
Query: 106 DPGPSAKDRALGLGGG----------RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRP 155
D + +D +G R VPLP DASSTL+VEGLP RREVAHIFRP
Sbjct: 896 DLASNGRD--IGFVSQPPANKIARPVRETVPLPQDASSTLYVEGLPPGSKRREVAHIFRP 953
Query: 156 FVGYKEVRLVSKESRH 171
FVGYKEVRLVSKES++
Sbjct: 954 FVGYKEVRLVSKESKN 969
>gi|356535808|ref|XP_003536435.1| PREDICTED: uncharacterized protein LOC100816230 isoform 1 [Glycine
max]
Length = 251
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 116/194 (59%), Gaps = 27/194 (13%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDV-PSG-----HELSSYYTRDDDRGALRGM 54
M DG W RQ PS + KRPRT+YD+ PSG +E+ +Y R+DD R +
Sbjct: 1 MTDGSWN----RQQSFLPPSAMLKRPRTEYDMSPSGLTSGGNEMHNYIARNDDHTGHRIL 56
Query: 55 RDTDSLGASYDRYLRSAQISSYSGGQSARHMSGGM-------PSRPVDDPRIVGIGGMDP 107
+DT +LG++YDRYL+SA ++S++ G+++ S G+ P + DP + G G
Sbjct: 57 KDTKTLGSAYDRYLQSAGLTSFNSGEASAISSVGLGRGVGGLPHHSLTDPAVTGHPGGGH 116
Query: 108 GPSAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFV 157
S R + G +PLPPDASSTL+VEGLPS +RREVAHIFRPFV
Sbjct: 117 DLSRNGRNVNYASQLPVDAASMPGPETLPLPPDASSTLYVEGLPSGSTRREVAHIFRPFV 176
Query: 158 GYKEVRLVSKESRH 171
GY+EVRLVSKES+H
Sbjct: 177 GYREVRLVSKESKH 190
>gi|356576047|ref|XP_003556146.1| PREDICTED: uncharacterized protein LOC100813445 isoform 2 [Glycine
max]
Length = 245
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 117/189 (61%), Gaps = 23/189 (12%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M DG+W + Q + L KRPRT+Y G+E+ +Y R+DD R ++DT +L
Sbjct: 1 MTDGFWNRQQQQPLQPSSAML--KRPRTEY---GGNEMHNYIARNDDHTGHRMLKDTKTL 55
Query: 61 GASYDRYLRSA-QISSYSGGQSA-------RHMSGGMPSRPVDDPRIVGIGGMDPGPSAK 112
G++YDRYL+SA Q++S++ G+++ GG+P + DP ++G G +
Sbjct: 56 GSAYDRYLQSAGQLTSFNSGEASAIGGVGLGRGVGGLPRHSLTDPAVMGHPGGGHDLARN 115
Query: 113 DRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEV 162
R + GG G VPLPPDASSTL+VEGLPSD +RREVAHIFRPFVGY+EV
Sbjct: 116 GRNVNYGGQLTVDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFVGYREV 175
Query: 163 RLVSKESRH 171
RLVSKES+H
Sbjct: 176 RLVSKESKH 184
>gi|357110599|ref|XP_003557104.1| PREDICTED: uncharacterized protein LOC100821534 [Brachypodium
distachyon]
Length = 261
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 119/216 (55%), Gaps = 45/216 (20%)
Query: 1 MADGYWRYS-DARQPQSALPSLVS--------------------KRPR-TDY-DVPSGHE 37
MAD YWRY+ D RQ Q + KRPR +Y DVP E
Sbjct: 1 MADAYWRYNADPRQLQQQQQQQMLPPSARAPNAAAPAAAGQQPLKRPRPAEYSDVPGSSE 60
Query: 38 LSSYYTRDDDRGALRGM------RDTDSLGASYDRYLRSAQISSYSGGQ---SARHMSGG 88
++ YY RD++R RDT +L ASY+RYLR+ QI S+ G S R +G
Sbjct: 61 MAGYYPRDEERAGYAAAAAAAAARDTQALNASYERYLRTGQIQSHGAGPAGGSIRPAAGA 120
Query: 89 MPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRRE 148
+DD V IGG++ R +G G G E PLPPDAS+TLF+EG+P+DC RRE
Sbjct: 121 NAGYQLDD--RVAIGGVE------GRNVGFGTGMPEPPLPPDASNTLFIEGIPNDCERRE 172
Query: 149 VAHIFRPFVGYKEVRLVSKESRH-----VSMIFLLF 179
V+HIFRPFVG+KEVRLV+KE RH + + F+ F
Sbjct: 173 VSHIFRPFVGFKEVRLVTKEPRHPGGDPIVLCFVDF 208
>gi|358345383|ref|XP_003636759.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|23304837|emb|CAD48198.1| RNA-binding protein [Medicago truncatula]
gi|355502694|gb|AES83897.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 261
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 118/195 (60%), Gaps = 30/195 (15%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYD-----VPSGHELSSYYTRDDDRGALRGMR 55
MADGYW + P S L KRPR DY+ +PSG+E+ Y +R++DR ++
Sbjct: 1 MADGYWNRQQSLLPHSGL----HKRPRPDYEMPASGLPSGNEMH-YLSREEDRSGHPMVK 55
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSA-------RHMSGGMPSRPVDDPRIV----GIGG 104
D+ ++G++YDRYL+ Q+ S++ G+++ + GG+P+ + DP + G GG
Sbjct: 56 DSKTIGSAYDRYLQ-GQVPSFTSGEASTVGALGLQRGIGGLPNHSLSDPSAMIGRHGGGG 114
Query: 105 MDPGPSAKDRALGLG--------GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
D P+ + G G LPPDAS TL++EGLPSDC+RREVAHIFRPF
Sbjct: 115 PDLAPNGRGMNYGFQPPMDPVSRHGPEPALLPPDASPTLYIEGLPSDCTRREVAHIFRPF 174
Query: 157 VGYKEVRLVSKESRH 171
VGY+EVRLVSKE++H
Sbjct: 175 VGYREVRLVSKEAKH 189
>gi|224066731|ref|XP_002302187.1| predicted protein [Populus trichocarpa]
gi|222843913|gb|EEE81460.1| predicted protein [Populus trichocarpa]
Length = 250
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 125/207 (60%), Gaps = 33/207 (15%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRD--DDRGALRGMRDTD 58
M DGYW + +QP + S + KRPR+DYD+PS +E+ +YY RD DDR ++D+
Sbjct: 1 MTDGYW---NRQQPSNVPSSGMLKRPRSDYDMPSSYEMQNYYPRDVDDDRTRYETVKDSK 57
Query: 59 SLGASYDRYLRSAQISSYSGGQSA--------RHMSGGMPSRPVDDPRIVG---IGGMDP 107
S+G++YDRYL++AQ +++ +++ R + GGM P+ D ++ G+D
Sbjct: 58 SIGSAYDRYLQNAQAPTFASREASALGGAGFGRGIGGGMSGLPIADSAVMTRPRSAGLDL 117
Query: 108 GPSAKDRALGLGGGRSE----------VPLPPDASSTLFVEGLPSDCSRREVAHIFRPFV 157
+ +D +G R E LPPDAS+TL+VEG P DCSRREVAHIFRPFV
Sbjct: 118 ASNGRD--VGFVRQRPEDRIARSDREMAHLPPDASNTLYVEGFPPDCSRREVAHIFRPFV 175
Query: 158 GYKEVRLVSKESRH-----VSMIFLLF 179
GYKEVRLVSKE+R + + F+ F
Sbjct: 176 GYKEVRLVSKEARQRGGDPIILCFVDF 202
>gi|115477659|ref|NP_001062425.1| Os08g0547000 [Oryza sativa Japonica Group]
gi|42408101|dbj|BAD09242.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|42408712|dbj|BAD09930.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113624394|dbj|BAF24339.1| Os08g0547000 [Oryza sativa Japonica Group]
gi|215767903|dbj|BAH00132.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 294
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 108/155 (69%), Gaps = 16/155 (10%)
Query: 24 KRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSA 82
KR R DY DVP+G +++ YY R+ DR +R+ +++GASYDRYLR+ + S + ++
Sbjct: 62 KRARPDYGDVPAGQDMTGYYPRETDRTGYHALRENEAIGASYDRYLRNG-MPSVAATETN 120
Query: 83 RHM------SGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLF 136
R + GGM PVDD R++G+G MD R +G G R E PLP DASSTL+
Sbjct: 121 RPVVGGMGGMGGMGGYPVDDRRMIGVG-MD------SRGMGYGA-RPEPPLPADASSTLY 172
Query: 137 VEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
VEGLP++C+RREV+HIFRPFVG++EVRLV+KESRH
Sbjct: 173 VEGLPANCTRREVSHIFRPFVGFREVRLVNKESRH 207
>gi|356535810|ref|XP_003536436.1| PREDICTED: uncharacterized protein LOC100816230 isoform 2 [Glycine
max]
Length = 243
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 113/189 (59%), Gaps = 25/189 (13%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M DG W RQ PS + KRPRT+Y G+E+ +Y R+DD R ++DT +L
Sbjct: 1 MTDGSWN----RQQSFLPPSAMLKRPRTEY---GGNEMHNYIARNDDHTGHRILKDTKTL 53
Query: 61 GASYDRYLRSA-QISSYSGGQSARHMSGGM-------PSRPVDDPRIVGIGGMDPGPSAK 112
G++YDRYL+SA Q++S++ G+++ S G+ P + DP + G G S
Sbjct: 54 GSAYDRYLQSAGQLTSFNSGEASAISSVGLGRGVGGLPHHSLTDPAVTGHPGGGHDLSRN 113
Query: 113 DRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEV 162
R + G +PLPPDASSTL+VEGLPS +RREVAHIFRPFVGY+EV
Sbjct: 114 GRNVNYASQLPVDAASMPGPETLPLPPDASSTLYVEGLPSGSTRREVAHIFRPFVGYREV 173
Query: 163 RLVSKESRH 171
RLVSKES+H
Sbjct: 174 RLVSKESKH 182
>gi|115466130|ref|NP_001056664.1| Os06g0127500 [Oryza sativa Japonica Group]
gi|25553563|dbj|BAC24834.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|55295879|dbj|BAD67747.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113594704|dbj|BAF18578.1| Os06g0127500 [Oryza sativa Japonica Group]
Length = 293
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 109/185 (58%), Gaps = 43/185 (23%)
Query: 24 KRPR-TDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGG-- 79
KRPR D+ DVP E++ YY+RD++R R RDT++L ASY+R+LR+ QI SY G
Sbjct: 51 KRPRPADFSDVPGAPEMAGYYSRDEERPGYRPARDTEALNASYERFLRTGQIQSYGAGAG 110
Query: 80 -----QSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASST 134
+S R +GG PV+D ++ GGM+ R +G GGG E PLPPDAS+T
Sbjct: 111 AGPGAESIRPAAGGNAGYPVEDRPMMAGGGME------ARNIGFGGGMPEPPLPPDASNT 164
Query: 135 LFVEGLPSDCSRREVAH----------------------------IFRPFVGYKEVRLVS 166
LF+EG+P+DC+RREV+ IFRPFVG++EVRLVS
Sbjct: 165 LFIEGIPTDCARREVSRILKSHAFFCLSLIFHLHKFCWSFTFPQDIFRPFVGFREVRLVS 224
Query: 167 KESRH 171
KE+RH
Sbjct: 225 KEARH 229
>gi|218201560|gb|EEC83987.1| hypothetical protein OsI_30140 [Oryza sativa Indica Group]
Length = 218
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 108/155 (69%), Gaps = 16/155 (10%)
Query: 24 KRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSA 82
KR R DY DVP+G +++ YY R+ DR +R+ +++GASYDRYLR+ + S + ++
Sbjct: 12 KRARPDYGDVPAGQDMTGYYPRETDRTGYHALRENEAIGASYDRYLRNG-MPSVAATETN 70
Query: 83 RHMSGGMPSR------PVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLF 136
R + GGM PVDD R++G+G MD R +G G R E PLP DASSTL+
Sbjct: 71 RPVVGGMGGMGGMGGYPVDDRRMIGVG-MD------SRGMGYGA-RPEPPLPADASSTLY 122
Query: 137 VEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
VEGLP++C+RREV+HIFRPFVG++EVRLV+KESRH
Sbjct: 123 VEGLPANCTRREVSHIFRPFVGFREVRLVNKESRH 157
>gi|222640974|gb|EEE69106.1| hypothetical protein OsJ_28175 [Oryza sativa Japonica Group]
Length = 268
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 108/155 (69%), Gaps = 16/155 (10%)
Query: 24 KRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSA 82
KR R DY DVP+G +++ YY R+ DR +R+ +++GASYDRYLR+ + S + ++
Sbjct: 62 KRARPDYGDVPAGQDMTGYYPRETDRTGYHALRENEAIGASYDRYLRNG-MPSVAATETN 120
Query: 83 RHMSGGMPSR------PVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLF 136
R + GGM PVDD R++G+G MD R +G G R E PLP DASSTL+
Sbjct: 121 RPVVGGMGGMGGMGGYPVDDRRMIGVG-MD------SRGMGYGA-RPEPPLPADASSTLY 172
Query: 137 VEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
VEGLP++C+RREV+HIFRPFVG++EVRLV+KESRH
Sbjct: 173 VEGLPANCTRREVSHIFRPFVGFREVRLVNKESRH 207
>gi|326490583|dbj|BAJ89959.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 333
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 109/164 (66%), Gaps = 23/164 (14%)
Query: 19 PSLVSKRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYS 77
PSL KR R DY D P G E++ YY R++ +RD +++GASYDRYLR+ + S +
Sbjct: 71 PSL--KRARPDYGDGPGGQEMAGYYPREN--AGYHSLRDNEAIGASYDRYLRNG-MPSVA 125
Query: 78 GGQSARHMSGGMPSR----------PVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPL 127
+ +R + G M PVDD R++G+ GMD RA+G G R E PL
Sbjct: 126 ANEPSRAVVGAMGGAAMVGGGMSGYPVDDRRMMGVVGMD------SRAMGYGA-RPEPPL 178
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
PPDAS+TL++EGLP++C+RREV+HIFRPFVG++EVRLV+KESRH
Sbjct: 179 PPDASNTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRH 222
>gi|326499832|dbj|BAJ90751.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501246|dbj|BAJ98854.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 109/164 (66%), Gaps = 23/164 (14%)
Query: 19 PSLVSKRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYS 77
PSL KR R DY D P G E++ YY R++ +RD +++GASYDRYLR+ + S +
Sbjct: 71 PSL--KRARPDYGDGPGGQEMAGYYPREN--AGYHSLRDNEAIGASYDRYLRNG-MPSVA 125
Query: 78 GGQSARHMSGGMPSR----------PVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPL 127
+ +R + G M PVDD R++G+ GMD RA+G G R E PL
Sbjct: 126 ANEPSRAVVGAMGGAAMVGGGMSGYPVDDRRMMGVVGMD------SRAMGYGA-RPEPPL 178
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
PPDAS+TL++EGLP++C+RREV+HIFRPFVG++EVRLV+KESRH
Sbjct: 179 PPDASNTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRH 222
>gi|357443729|ref|XP_003592142.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355481190|gb|AES62393.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 252
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 118/197 (59%), Gaps = 33/197 (16%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYD-----VPSGHELSSYYTRDDDRGALRGMR 55
MADG+W P P + KRPRT+YD V SG+E+ +Y +++ L
Sbjct: 1 MADGFWNRQQQHLPP---PGGMLKRPRTEYDTAPSGVTSGNEVHNYIAQNNGHQMLN--- 54
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQS--------ARHMSGGMPSRPVDDPRIVG-IGGMD 106
DT LG++YDR+L+SA ++S++ G++ AR + G +P + DP +G + G+
Sbjct: 55 DTKILGSAYDRFLQSAGLTSFNSGEASVIGGVGFARGV-GELPGHSLGDPSAMGHLSGVG 113
Query: 107 PGP--SAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFR 154
GP S R + GG G +PLP DASSTL+VEGLPSD ++REVAHIFR
Sbjct: 114 GGPDLSRNGRDVNFGGQLPIDAVSRPGPETIPLPRDASSTLYVEGLPSDSTKREVAHIFR 173
Query: 155 PFVGYKEVRLVSKESRH 171
PFVGY+EVRLV+KES+H
Sbjct: 174 PFVGYREVRLVAKESKH 190
>gi|297842455|ref|XP_002889109.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334950|gb|EFH65368.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 240
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 122/204 (59%), Gaps = 35/204 (17%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVP-----SGHELSSYYTRDDDRGALRGMR 55
MADGYW + ++ Q LPS KRPR+D++ P +GH YY RD+D +
Sbjct: 1 MADGYW---NQQRQQHHLPSGPPKRPRSDFEAPPSTMATGHG-GGYYPRDEDLD----VP 52
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSA------RHMSGGMPSRPVDD--PRIVGIGGMDP 107
DT ++G++YDRYL+S Q SS G+ GG + VDD R G+ +D
Sbjct: 53 DTRTIGSAYDRYLQSVQTSSLQSGEGGSVSMGRPGGGGGGNGQTVDDFMMRRGGVLPLDY 112
Query: 108 GPSAKDRALGLGG-------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK 160
GP+ + A+G R +PLPPDAS+TL+VEGLPS+CSRREVAHIFRPFVGY+
Sbjct: 113 GPNGQ--AIGFDPPESVGRRNRETLPLPPDASNTLYVEGLPSNCSRREVAHIFRPFVGYR 170
Query: 161 EVRLVSKESRH-----VSMIFLLF 179
EVRLV+K+S+H + + F+ F
Sbjct: 171 EVRLVTKDSKHRNGDPIVLCFVDF 194
>gi|388500704|gb|AFK38418.1| unknown [Medicago truncatula]
Length = 252
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 117/197 (59%), Gaps = 33/197 (16%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYD-----VPSGHELSSYYTRDDDRGALRGMR 55
MADG+W P P + KRPRT+YD V SG+E+ +Y +++ L
Sbjct: 1 MADGFWNRQQQHLPP---PGGMLKRPRTEYDTAPSGVTSGNEVHNYIAQNNGHQMLN--- 54
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQS--------ARHMSGGMPSRPVDDPRIVG-IGGMD 106
DT LG++YDR+L+SA ++S++ G++ AR + G +P + DP +G + G+
Sbjct: 55 DTKILGSAYDRFLQSAGLTSFNSGEASVIGGVGFARGV-GELPGHSLGDPSAMGHLSGVG 113
Query: 107 PGP--SAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFR 154
GP S R GG G +PLP DASSTL+VEGLPSD ++REVAHIFR
Sbjct: 114 GGPDLSRNGRDANFGGQLPIDAVSRPGPETIPLPRDASSTLYVEGLPSDSTKREVAHIFR 173
Query: 155 PFVGYKEVRLVSKESRH 171
PFVGY+EVRLV+KES+H
Sbjct: 174 PFVGYREVRLVAKESKH 190
>gi|238478568|ref|NP_001154354.1| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
gi|332191964|gb|AEE30085.1| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
Length = 253
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 117/196 (59%), Gaps = 24/196 (12%)
Query: 1 MADGYWRYSDARQ-PQSALPSLVS-KRPRTDYD-----VPSGHELSSYYTRDDDRGALRG 53
MAD YW Q P S+ P ++ KRPR+D+ +PSG ++ SY ++D+DRG
Sbjct: 1 MADEYWNQQRQYQLPISSNPHVLPPKRPRSDFQGTPYLIPSG-DMHSYLSQDEDRGIPHS 59
Query: 54 MRDTDSLGASYDRYLRSAQI--------SSYSGGQSARHMSGGMPSRPVDDPRIVGIGGM 105
++DT S+G++YDRYL+S Q ++G R M P + G GG
Sbjct: 60 VKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVRQGGSNMMPGPSMGELMAGCGGS 119
Query: 106 DPG---PSAKDRALG----LG-GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFV 157
P P+ +D G +G GR PLPPD S+TL+VEGLPS+CSRREV+HIFRPFV
Sbjct: 120 LPSDFRPNGRDMGFGQLDSVGRPGREPHPLPPDVSNTLYVEGLPSNCSRREVSHIFRPFV 179
Query: 158 GYKEVRLVSKESRHVS 173
GY+EVRLV+++S+H S
Sbjct: 180 GYREVRLVTQDSKHRS 195
>gi|293331463|ref|NP_001168957.1| uncharacterized protein LOC100382777 [Zea mays]
gi|223974013|gb|ACN31194.1| unknown [Zea mays]
Length = 287
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 103/167 (61%), Gaps = 27/167 (16%)
Query: 24 KRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSA 82
KR R D+ DV G +++ YY R+ DR +R+ D+LGASYDRYLR+ ++S ++
Sbjct: 68 KRARPDFGDVSGGQDMTGYYPRETDRSGYHSLRENDTLGASYDRYLRNG-MASVGANDTS 126
Query: 83 RHMSGGMPSRP------------------VDDPRIVGIGGMDPGPSAKDRALGLGGGRSE 124
R G VD R++G+ GMD R +G GG R E
Sbjct: 127 RAAGMGAGLAAGMTAGMGAGMAAGMAGYGVDGQRMMGVVGMD------SRGMGYGG-RPE 179
Query: 125 VPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
PLPPDASSTL++EGLP++C+RREV+HIFRPFVG++EVRLV+KESRH
Sbjct: 180 PPLPPDASSTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRH 226
>gi|62867580|emb|CAI84655.1| hypothetical protein [Nicotiana tabacum]
Length = 183
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 115/190 (60%), Gaps = 32/190 (16%)
Query: 1 MADGYW-RYSDARQPQSALPSLVSKRPRTDY--DVP-----SGHELSSYYTRDDDRGALR 52
M D YW ++ +A PQSA + KRPR++Y D+P S HE+ Y RDDDRG R
Sbjct: 1 MGDAYWNQHREAPLPQSAG---LLKRPRSEYVPDLPPSGMSSAHEMHHYLGRDDDRGGPR 57
Query: 53 GMRDTDSLGASYDRYLRS--------AQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGG 104
+ DT S+G++YDRYL+S + ++Y G AR +GG+ S PV DP G
Sbjct: 58 -VVDTQSIGSAYDRYLQSSQLSSLSVGEANNYKGVGLARAGAGGISSLPVRDPLPSARG- 115
Query: 105 MDPGPSAKDRALGLGGG---------RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRP 155
P + RA+ L G R +PLPPDAS+TL++EGLP+D SRREVAHIFRP
Sbjct: 116 --PELAPNGRAMVLRGQMPVESLPRPRETLPLPPDASNTLYIEGLPADSSRREVAHIFRP 173
Query: 156 FVGYKEVRLV 165
FVGYKEVRLV
Sbjct: 174 FVGYKEVRLV 183
>gi|125553883|gb|EAY99488.1| hypothetical protein OsI_21456 [Oryza sativa Indica Group]
Length = 227
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 99/169 (58%), Gaps = 41/169 (24%)
Query: 38 LSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGG-------QSARHMSGGMP 90
++ YY+RD++R R RDT++L ASY+R+LR+ QI SY G +S R +GG
Sbjct: 1 MAGYYSRDEERPGYRPARDTEALNASYERFLRTGQIQSYGAGAGAGPGAESIRPAAGGNA 60
Query: 91 SRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVA 150
PV+D ++ GGM+ R +G GGG E PLPPDAS+TLF+EG+P+DC+RREV+
Sbjct: 61 GYPVEDRPMMAGGGMEA------RNIGFGGGMPEPPLPPDASNTLFIEGIPTDCARREVS 114
Query: 151 H----------------------------IFRPFVGYKEVRLVSKESRH 171
IFRPFVG++EVRLVSKE+RH
Sbjct: 115 RILKSHAFFCLSLIFHLHKFCWSFTFPQDIFRPFVGFREVRLVSKEARH 163
>gi|296088114|emb|CBI35503.3| unnamed protein product [Vitis vinifera]
Length = 292
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 110/193 (56%), Gaps = 33/193 (17%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVP-----SGHELSSYYTRDDDRGALRGMR 55
MAD +W +RQ V KRPR+DYD+P SG+E+ +Y + DD G R ++
Sbjct: 32 MADRFW----SRQYFG-----VPKRPRSDYDLPYSGLPSGNEVHNYLVQGDDLGGPRSVK 82
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGG----------- 104
D+ ++G +YD+Y + I S++ G ++ G+ + + + I G
Sbjct: 83 DSKTVGLAYDQYFQ--DIPSFTSGAASDFRGVGLGTATGEAISGLSISGPAVMDHLEALD 140
Query: 105 MDPGPSAKDRALG------LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVG 158
D PS + R G + R PLPPDASSTL+VEGLP D +RREVAHIFRPFVG
Sbjct: 141 SDLPPSGQGRRFGHQLDAIIRPSRETAPLPPDASSTLYVEGLPPDSTRREVAHIFRPFVG 200
Query: 159 YKEVRLVSKESRH 171
YKEVRLVSKES+H
Sbjct: 201 YKEVRLVSKESKH 213
>gi|359493018|ref|XP_002264314.2| PREDICTED: uncharacterized protein LOC100242739 [Vitis vinifera]
Length = 261
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 110/193 (56%), Gaps = 33/193 (17%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVP-----SGHELSSYYTRDDDRGALRGMR 55
MAD +W +RQ V KRPR+DYD+P SG+E+ +Y + DD G R ++
Sbjct: 1 MADRFW----SRQYFG-----VPKRPRSDYDLPYSGLPSGNEVHNYLVQGDDLGGPRSVK 51
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGG----------- 104
D+ ++G +YD+Y + I S++ G ++ G+ + + + I G
Sbjct: 52 DSKTVGLAYDQYFQ--DIPSFTSGAASDFRGVGLGTATGEAISGLSISGPAVMDHLEALD 109
Query: 105 MDPGPSAKDRALG------LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVG 158
D PS + R G + R PLPPDASSTL+VEGLP D +RREVAHIFRPFVG
Sbjct: 110 SDLPPSGQGRRFGHQLDAIIRPSRETAPLPPDASSTLYVEGLPPDSTRREVAHIFRPFVG 169
Query: 159 YKEVRLVSKESRH 171
YKEVRLVSKES+H
Sbjct: 170 YKEVRLVSKESKH 182
>gi|357148760|ref|XP_003574884.1| PREDICTED: uncharacterized protein LOC100836479 [Brachypodium
distachyon]
Length = 296
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 107/169 (63%), Gaps = 28/169 (16%)
Query: 19 PSLVSKRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYS 77
PSL KR R DY D P G +++ YY R++ +RD + LGASYDRYLR+ + + +
Sbjct: 79 PSL--KRARPDYVDGPGGQDMAGYYPREN--AGYHSLRDNEVLGASYDRYLRNG-VPAVA 133
Query: 78 GGQSARHMSGGMPSR---------------PVDDPRIVGIGGMDPGPSAKDRALGLGGGR 122
+ +R + GGM P D+ R++G+ GMD R +G G R
Sbjct: 134 VNEPSRAVVGGMGGAGMGGAGMVGAGMSGYPGDERRMMGVVGMD------SRGMGYGA-R 186
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
E PLPPDAS+TL++EGLP++C+RREV+HIFRPFVG++EVRLV+KESRH
Sbjct: 187 PEPPLPPDASNTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRH 235
>gi|186478724|ref|NP_173554.3| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
gi|332191963|gb|AEE30084.1| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
Length = 421
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 100/162 (61%), Gaps = 17/162 (10%)
Query: 28 TDYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQI--------SSYSGG 79
T Y +PSG ++ SY ++D+DRG ++DT S+G++YDRYL+S Q ++G
Sbjct: 203 TPYLIPSG-DMHSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGV 261
Query: 80 QSARHMSGGMPSRPVDDPRIVGIGGMDPG---PSAKDRALG----LG-GGRSEVPLPPDA 131
R M P + G GG P P+ +D G +G GR PLPPD
Sbjct: 262 GMVRQGGSNMMPGPSMGELMAGCGGSLPSDFRPNGRDMGFGQLDSVGRPGREPHPLPPDV 321
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVS 173
S+TL+VEGLPS+CSRREV+HIFRPFVGY+EVRLV+++S+H S
Sbjct: 322 SNTLYVEGLPSNCSRREVSHIFRPFVGYREVRLVTQDSKHRS 363
>gi|413953431|gb|AFW86080.1| hypothetical protein ZEAMMB73_802063, partial [Zea mays]
Length = 177
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 81/127 (63%), Gaps = 9/127 (7%)
Query: 31 DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSA---RHMSG 87
DVP + + YY RD++R R RDT+SL ASY+R+LR+ QI S+ GG + R G
Sbjct: 42 DVPGAPDTAGYYPRDEERAGYRAARDTESLNASYERFLRTGQIQSFGGGHAGEPIRPAVG 101
Query: 88 GMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRR 147
G + PVDD ++ GMD R +G GG E PLPPDAS+TL++EG+PSDC+RR
Sbjct: 102 GNAAYPVDDRSMMAARGMD------SRNIGFVGGMPEPPLPPDASNTLYIEGVPSDCTRR 155
Query: 148 EVAHIFR 154
EV+ I R
Sbjct: 156 EVSRILR 162
>gi|30699215|ref|NP_177820.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|119360107|gb|ABL66782.1| At1g76940 [Arabidopsis thaliana]
gi|332197785|gb|AEE35906.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 233
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 109/195 (55%), Gaps = 24/195 (12%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPS-----GHELSSYYTRDDDRGALRGMR 55
MADGYW + ++ Q P KRPR+D++ PS GH YY RD+D +
Sbjct: 1 MADGYW---NQQRQQHHPPGGPMKRPRSDFEAPSSTMTIGHG-GGYYPRDEDLD----VP 52
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSARHMSGGMPS----RPVDD--PRIVGIGGMDPGP 109
DT ++G++YDRYL+S Q R GG + +DD R G+ +D GP
Sbjct: 53 DTRTIGSAYDRYLQSVQSGEGGSVSMGRSGGGGGGGGGNVQTIDDFMLRRGGVLPLDHGP 112
Query: 110 SAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES 169
+ LP DAS+TL+VEGLPS+CSRREVAHIFRPFVGY+EVRLV+K+S
Sbjct: 113 NGHTIGFDPPEPVGRRNLPSDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDS 172
Query: 170 RH-----VSMIFLLF 179
+H + + F+ F
Sbjct: 173 KHRNGDPIVLCFVDF 187
>gi|116781380|gb|ABK22075.1| unknown [Picea sitchensis]
Length = 265
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 109/197 (55%), Gaps = 26/197 (13%)
Query: 1 MADGYW-RYSDARQPQSALPSLVSKRPRTDYDVPSG--HELSSYYTRDD---DRGALRGM 54
M D YW R++ R +SA + +KRPR +YD+ + + Y R+D D + R +
Sbjct: 1 MGDTYWNRFAAERDGRSAALASAAKRPRNEYDLLTSGSRDGPGYLPREDPRLDERSRRLL 60
Query: 55 RDTDSLGASYDRYLRSAQISSYSGGQSA-----------RHMSGGMPSRPVDDPRIVGIG 103
R+TD LG +Y+RY R+ S S G +A R G+ +DD ++G
Sbjct: 61 RETDPLGPAYERYARNGLPSYGSSGLNAGDLGGLGMGLGRSAGSGLGGSALDDQVLMGRR 120
Query: 104 -GMDPGPSAKDRALGLGGGRSEVPL--------PPDASSTLFVEGLPSDCSRREVAHIFR 154
MD G K + LG + PL PPDAS+TLFVEGLP C+RRE AHIFR
Sbjct: 121 LSMDAGLGGKGQGLGFKDSQLRDPLRRPDNDHLPPDASNTLFVEGLPPKCTRREAAHIFR 180
Query: 155 PFVGYKEVRLVSKESRH 171
PFVG+KEVRLV+KE+R+
Sbjct: 181 PFVGFKEVRLVNKEARN 197
>gi|217075194|gb|ACJ85957.1| unknown [Medicago truncatula]
Length = 107
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 75/105 (71%), Gaps = 3/105 (2%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M+D YWRY++ +Q A P++ KRPRT+YDV H L++Y+ DDDRG L+ +RDT+SL
Sbjct: 1 MSDAYWRYAEPQQ--HAPPTIPGKRPRTEYDVSGVHNLANYFPHDDDRGRLQVIRDTESL 58
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGM 105
ASY+RYLR+A ISS+ GQS R + GG+PS +DD + +G +
Sbjct: 59 DASYERYLRNA-ISSHGSGQSTRTIDGGVPSHSIDDSHVTSMGEL 102
>gi|297850552|ref|XP_002893157.1| hypothetical protein ARALYDRAFT_472365 [Arabidopsis lyrata subsp.
lyrata]
gi|297338999|gb|EFH69416.1| hypothetical protein ARALYDRAFT_472365 [Arabidopsis lyrata subsp.
lyrata]
Length = 411
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 97/175 (55%), Gaps = 33/175 (18%)
Query: 28 TDYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSARHMSG 87
T Y +PSG + SY +RD+DRG ++DT ++G++YD+YL + Q S ++
Sbjct: 200 TPYVMPSGG-MHSYLSRDEDRGIPHSVKDTRTIGSAYDQYLNN-QTPSVPSEEAGPFNGA 257
Query: 88 GMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG---------GRS--EVPLPPDASSTLF 136
GM + G M PGP + G GG GR+ PLPPD S+TL+
Sbjct: 258 GMGRQ--------GGNNMMPGPPMGELMAGRGGSFPSDFRPNGRAIGREPLPPDVSNTLY 309
Query: 137 VEGLPSDCSRREVA-------HIFRPFVGYKEVRLVSKESRH-----VSMIFLLF 179
VEGLPS+CSRRE +FRPFVGY+EVRLV+K+S+H V + F+ F
Sbjct: 310 VEGLPSNCSRRENVLSCSLSLTVFRPFVGYREVRLVTKDSKHRSGDPVVLCFVDF 364
>gi|162462145|ref|NP_001105534.1| meg5 protein [Zea mays]
gi|47078331|gb|AAT09814.1| MEG5 [Zea mays]
Length = 163
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 63/78 (80%), Gaps = 7/78 (8%)
Query: 94 VDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIF 153
VD R++G+ GMD R +G GG R E PLPPDASSTL++EGLP++C+RREV+HIF
Sbjct: 6 VDGQRMMGVVGMD------SRGMGYGG-RPEPPLPPDASSTLYIEGLPANCTRREVSHIF 58
Query: 154 RPFVGYKEVRLVSKESRH 171
RPFVG++EVRLV+KESRH
Sbjct: 59 RPFVGFREVRLVNKESRH 76
>gi|242081967|ref|XP_002445752.1| hypothetical protein SORBIDRAFT_07g025090 [Sorghum bicolor]
gi|241942102|gb|EES15247.1| hypothetical protein SORBIDRAFT_07g025090 [Sorghum bicolor]
Length = 203
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 84/143 (58%), Gaps = 10/143 (6%)
Query: 38 LSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDP 97
++ YY R+ DR +RD D++GASYDRYLR+ ++S + R G
Sbjct: 1 MTGYYPRETDRAGYHSLRDNDAIGASYDRYLRNG-MASVGANDTTRAAGMGAGMGAGMAA 59
Query: 98 RIVGIGGMDPGPS-----AKDR----ALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRRE 148
+ G G DR GGR E PLPPDAS TL++EGLP++C+RRE
Sbjct: 60 GMGAGMGAAMGAGMAGYGVDDRRMMGVGMGYGGRPEPPLPPDASPTLYIEGLPANCTRRE 119
Query: 149 VAHIFRPFVGYKEVRLVSKESRH 171
V+HIFRPFVG++EVRLV+KESRH
Sbjct: 120 VSHIFRPFVGFREVRLVNKESRH 142
>gi|147806465|emb|CAN74250.1| hypothetical protein VITISV_019089 [Vitis vinifera]
Length = 337
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 92/186 (49%), Gaps = 46/186 (24%)
Query: 32 VPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSA-------------QISSYSG 78
+PSG+E+ +Y + DD G R ++D+ ++G +YD+Y + I S++
Sbjct: 53 LPSGNEVHNYLVQGDDLGGPRSVKDSKTVGLAYDQYFQDVCALKPEPMFILIRHIPSFTS 112
Query: 79 GQSARHMSGGMPSRPVDDPRIVGIGG-----------MDPGPSAKDRALG------LGGG 121
G ++ G+ + + + I G D PS R G +
Sbjct: 113 GAASDFRGVGLGTATGEAISGLSISGPAVMDHLEALDSDLPPSGXGRRFGHQLDAIIRPS 172
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVA----------------HIFRPFVGYKEVRLV 165
R PLPPDASSTL+VEGLP D +RREVA +IFRPFVGYKEVRLV
Sbjct: 173 RETAPLPPDASSTLYVEGLPPDSTRREVARILQDVITLPRNYCDSYIFRPFVGYKEVRLV 232
Query: 166 SKESRH 171
SKES+H
Sbjct: 233 SKESKH 238
>gi|413953429|gb|AFW86078.1| hypothetical protein ZEAMMB73_802063 [Zea mays]
Length = 130
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 51/58 (87%)
Query: 114 RALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
R +G GG E PLPPDAS+TL++EG+PSDC+RREV+HIFRPFVG++EVRLV+KE +H
Sbjct: 10 RNIGFVGGMPEPPLPPDASNTLYIEGVPSDCTRREVSHIFRPFVGFREVRLVNKEPKH 67
>gi|168024982|ref|XP_001765014.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683823|gb|EDQ70230.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 158
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 65/100 (65%), Gaps = 15/100 (15%)
Query: 95 DDPRIVG--IGGMDPGPSAKDRALGLGGGRSE--------VPLPPDASSTLFVEGLPSDC 144
D+ +++G +G +D G + ALGL GG E LPPDASSTLFV+GLP DC
Sbjct: 20 DESQLMGARMGPLDVGMGGRPGALGLNGGAPEPDVLRGGLEVLPPDASSTLFVDGLPQDC 79
Query: 145 SRREVAHIFRPFVGYKEVRLVSKESR-----HVSMIFLLF 179
SRRE AHIFRPF+G+KEVRLV K+++ V + F+ F
Sbjct: 80 SRREAAHIFRPFIGFKEVRLVHKDAKRADGGKVVLCFVEF 119
>gi|357443731|ref|XP_003592143.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355481191|gb|AES62394.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|388515921|gb|AFK46022.1| unknown [Medicago truncatula]
Length = 147
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 11/83 (13%)
Query: 99 IVGIGGMDPGPSAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRRE 148
+ G+GG P S R + GG G +PLP DASSTL+VEGLPSD ++RE
Sbjct: 4 LSGVGG-GPDLSRNGRDVNFGGQLPIDAVSRPGPETIPLPRDASSTLYVEGLPSDSTKRE 62
Query: 149 VAHIFRPFVGYKEVRLVSKESRH 171
VAHIFRPFVGY+EVRLV+KES+H
Sbjct: 63 VAHIFRPFVGYREVRLVAKESKH 85
>gi|334183951|ref|NP_001185414.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332197786|gb|AEE35907.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 179
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 84/184 (45%), Gaps = 56/184 (30%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
MADGYW + ++ Q P KRPR+D+ G + T DD
Sbjct: 1 MADGYW---NQQRQQHHPPGGPMKRPRSDFGGGGGGGGGNVQTIDD-------------- 43
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
LR + G + H G P PV
Sbjct: 44 -----FMLRRGGVLPLDHGPNG-HTIGFDPPEPV-------------------------- 71
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH-----VSMI 175
GR LP DAS+TL+VEGLPS+CSRREVAHIFRPFVGY+EVRLV+K+S+H + +
Sbjct: 72 GRRN--LPSDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVLC 129
Query: 176 FLLF 179
F+ F
Sbjct: 130 FVDF 133
>gi|26450151|dbj|BAC42194.1| unknown protein [Arabidopsis thaliana]
Length = 156
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/45 (82%), Positives = 44/45 (97%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
LP DAS+TL+VEGLPS+CSRREVAHIFRPFVGY+EVRLV+K+S+H
Sbjct: 53 LPSDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKH 97
>gi|116781833|gb|ABK22259.1| unknown [Picea sitchensis]
Length = 274
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 43/50 (86%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
R + LPPDAS+TLFVEGLP+DC+RRE AHIFRPF+G+KEVRLV KE R
Sbjct: 147 RPDEHLPPDASNTLFVEGLPADCTRREAAHIFRPFIGFKEVRLVQKEPRR 196
>gi|225429574|ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257637 isoform 1 [Vitis
vinifera]
gi|296081671|emb|CBI20676.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 90/186 (48%), Gaps = 24/186 (12%)
Query: 1 MADGYWRYSDARQ----PQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRD 56
MAD YWR P+S+ P + D V + H L + +D GA
Sbjct: 1 MADPYWRRGAPSDRGSIPRSSFPGYLP----LDPSVSAAHHL---WGTNDLHGAPSDYPP 53
Query: 57 TDSL----GASYDRYLRSAQI--SSYSGGQSARHMSGGMPSRPVDDPRIVG-----IGGM 105
D L GA + ++ GG +A G P+ PV+DP ++G G+
Sbjct: 54 KDILPVRPGAHDFDDIMGIRVPPKPVIGGFTATTNIKGYPN-PVEDPNLIGQRRDVAHGI 112
Query: 106 DPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
PG +R G S +P P S+ LFV+GLP DC+RREV H+FRPF+G+KE+R+V
Sbjct: 113 SPGIPDIERPSSFGNVES-LPPPVQESNILFVDGLPKDCTRREVGHLFRPFIGFKEIRVV 171
Query: 166 SKESRH 171
KE RH
Sbjct: 172 HKEPRH 177
>gi|8920632|gb|AAF81354.1|AC036104_3 Contains weak similarity to bab503 major core protein from Simian
T-cell lymphotrophic virus type 1 gb|AF230486
[Arabidopsis thaliana]
Length = 430
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 17/137 (12%)
Query: 28 TDYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQI--------SSYSGG 79
T Y +PSG ++ SY ++D+DRG ++DT S+G++YDRYL+S Q ++G
Sbjct: 203 TPYLIPSG-DMHSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGV 261
Query: 80 QSARHMSGGMPSRPVDDPRIVGIGGMDPG---PSAKDRALG----LG-GGRSEVPLPPDA 131
R M P + G GG P P+ +D G +G GR PLPPD
Sbjct: 262 GMVRQGGSNMMPGPSMGELMAGCGGSLPSDFRPNGRDMGFGQLDSVGRPGREPHPLPPDV 321
Query: 132 SSTLFVEGLPSDCSRRE 148
S+TL+VEGLPS+CSRRE
Sbjct: 322 SNTLYVEGLPSNCSRRE 338
>gi|302760451|ref|XP_002963648.1| hypothetical protein SELMODRAFT_69289 [Selaginella moellendorffii]
gi|300168916|gb|EFJ35519.1| hypothetical protein SELMODRAFT_69289 [Selaginella moellendorffii]
Length = 92
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 42/47 (89%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVS 173
LP DASSTLFV+GLPSDC+RRE AHIFRPF+G+KEVRLV K+++ +
Sbjct: 1 LPHDASSTLFVDGLPSDCTRREAAHIFRPFIGFKEVRLVHKDAKRTT 47
>gi|302785932|ref|XP_002974737.1| hypothetical protein SELMODRAFT_59352 [Selaginella moellendorffii]
gi|300157632|gb|EFJ24257.1| hypothetical protein SELMODRAFT_59352 [Selaginella moellendorffii]
Length = 92
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 42/47 (89%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVS 173
LP DASSTLFV+GLPSDC+RRE AHIFRPF+G+KEVRLV K+++ +
Sbjct: 1 LPHDASSTLFVDGLPSDCTRREAAHIFRPFIGFKEVRLVHKDAKRAT 47
>gi|302771087|ref|XP_002968962.1| hypothetical protein SELMODRAFT_38126 [Selaginella moellendorffii]
gi|302816665|ref|XP_002990011.1| hypothetical protein SELMODRAFT_38125 [Selaginella moellendorffii]
gi|300142322|gb|EFJ09024.1| hypothetical protein SELMODRAFT_38125 [Selaginella moellendorffii]
gi|300163467|gb|EFJ30078.1| hypothetical protein SELMODRAFT_38126 [Selaginella moellendorffii]
Length = 73
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 41/44 (93%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
LPP+AS+TLFV+GLP DC+RRE AHIFRPF+G+KEVR+V K+++
Sbjct: 1 LPPEASATLFVDGLPIDCTRREAAHIFRPFIGFKEVRVVHKDAK 44
>gi|222634953|gb|EEE65085.1| hypothetical protein OsJ_20124 [Oryza sativa Japonica Group]
Length = 236
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 52/86 (60%), Gaps = 12/86 (13%)
Query: 93 PVDDPRIV------GIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSR 146
P++DP +V G P L L G R D S+ LFV+GLP+DC+R
Sbjct: 88 PLEDPALVRRSSSLGKTASIPDVEHPRPLLNLDGPRE------DESNILFVDGLPTDCTR 141
Query: 147 REVAHIFRPFVGYKEVRLVSKESRHV 172
REVAH+FRPFVG+K++RLV KE RHV
Sbjct: 142 REVAHLFRPFVGFKDIRLVHKEPRHV 167
>gi|215707027|dbj|BAG93487.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 135
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLL 178
S TL+VEGLPS+C++REVAHIFRPF G++EVRLV+KESRH LL
Sbjct: 36 SRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGSCNLL 82
>gi|115480271|ref|NP_001063729.1| Os09g0527100 [Oryza sativa Japonica Group]
gi|113631962|dbj|BAF25643.1| Os09g0527100 [Oryza sativa Japonica Group]
Length = 149
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLL 178
S TL+VEGLPS+C++REVAHIFRPF G++EVRLV+KESRH LL
Sbjct: 50 SRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGSCNLL 96
>gi|218202488|gb|EEC84915.1| hypothetical protein OsI_32114 [Oryza sativa Indica Group]
gi|222641952|gb|EEE70084.1| hypothetical protein OsJ_30080 [Oryza sativa Japonica Group]
Length = 119
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLL 178
S TL+VEGLPS+C++REVAHIFRPF G++EVRLV+KESRH LL
Sbjct: 20 SRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGSCNLL 66
>gi|218197575|gb|EEC80002.1| hypothetical protein OsI_21654 [Oryza sativa Indica Group]
Length = 232
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 43/58 (74%), Gaps = 6/58 (10%)
Query: 116 LGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVS 173
L L G R D S+ LFV+GLP+DC+RREVAH+FRPFVG+K++RLV KE RH S
Sbjct: 117 LNLDGPRE------DESNILFVDGLPTDCTRREVAHLFRPFVGFKDIRLVHKEPRHSS 168
>gi|215693881|dbj|BAG89080.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 119
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLL 178
S TL+VEGLPS+C++REVAHIFRPF G++EVRLV+KESRH LL
Sbjct: 20 SRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGSCNLL 66
>gi|115480273|ref|NP_001063730.1| Os09g0527500 [Oryza sativa Japonica Group]
gi|52077323|dbj|BAD46364.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113631963|dbj|BAF25644.1| Os09g0527500 [Oryza sativa Japonica Group]
gi|218202489|gb|EEC84916.1| hypothetical protein OsI_32115 [Oryza sativa Indica Group]
gi|222641953|gb|EEE70085.1| hypothetical protein OsJ_30081 [Oryza sativa Japonica Group]
Length = 235
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 39/47 (82%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLL 178
S TL+VEGLPS+C++REVAHIFRPF G++EVRLV+KE RH LL
Sbjct: 136 SRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKEIRHAGSCNLL 182
>gi|224286216|gb|ACN40817.1| unknown [Picea sitchensis]
Length = 308
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 40/43 (93%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
P ++S+T+F+EGLP+DCSRREVAHIFRPF+GYK+++++ KE R
Sbjct: 199 PDESSNTIFIEGLPADCSRREVAHIFRPFIGYKQIKVIHKEPR 241
>gi|224088786|ref|XP_002308540.1| predicted protein [Populus trichocarpa]
gi|222854516|gb|EEE92063.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 39/45 (86%)
Query: 126 PLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
P+P S+ LFV+GLP+DC+RREV H+FRPF+GYKE+R+V KE+R
Sbjct: 167 PVPKGESNILFVDGLPTDCTRREVGHLFRPFIGYKEIRVVHKEAR 211
>gi|313761403|gb|ADR79706.1| RNA binding protein U620 [Marsilea vestita]
Length = 118
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 39/41 (95%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
DA+STL+VEG+P+DCSRRE AHIFRPFVG+KEVRLV K+++
Sbjct: 1 DATSTLYVEGVPADCSRREAAHIFRPFVGFKEVRLVRKDAK 41
>gi|224033783|gb|ACN35967.1| unknown [Zea mays]
Length = 331
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES-RHVSMI 175
G E LPPDA++T++VEGLP +C+RREVAHIFR ++G+ E+RLV+K S +H+ +
Sbjct: 230 GAPEPSLPPDATNTIYVEGLPINCTRREVAHIFRQYMGFLEMRLVNKGSNKHLCFV 285
>gi|293334753|ref|NP_001168219.1| hypothetical protein [Zea mays]
gi|223946801|gb|ACN27484.1| unknown [Zea mays]
gi|414591373|tpg|DAA41944.1| TPA: hypothetical protein ZEAMMB73_165038 [Zea mays]
Length = 441
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES-RHVSMI 175
G E LPPDA++T++VEGLP +C+RREVAHIFR ++G+ E+RLV+K S +H+ +
Sbjct: 340 GAPEPSLPPDATNTIYVEGLPINCTRREVAHIFRQYMGFLEMRLVNKGSNKHLCFV 395
>gi|414591374|tpg|DAA41945.1| TPA: hypothetical protein ZEAMMB73_165038 [Zea mays]
Length = 469
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES-RHVSMI 175
G E LPPDA++T++VEGLP +C+RREVAHIFR ++G+ E+RLV+K S +H+ +
Sbjct: 340 GAPEPSLPPDATNTIYVEGLPINCTRREVAHIFRQYMGFLEMRLVNKGSNKHLCFV 395
>gi|403347348|gb|EJY73094.1| RRM domain containing protein [Oxytricha trifallax]
Length = 429
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 42/49 (85%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
+ +P+P +A++T++VEGLP D + REVAHIFRPF+G+K++RL+ ++++
Sbjct: 303 KHNLPIPKNATNTVYVEGLPHDTTEREVAHIFRPFLGFKQLRLIPRDTK 351
>gi|357110782|ref|XP_003557195.1| PREDICTED: uncharacterized protein LOC100823400 [Brachypodium
distachyon]
Length = 209
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 36/41 (87%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
D S+ LFV+GLP+DC RREVAH+FRPFVG+K++RLV KE R
Sbjct: 103 DESNILFVDGLPTDCKRREVAHLFRPFVGFKDLRLVHKEPR 143
>gi|388521817|gb|AFK48970.1| unknown [Lotus japonicus]
Length = 229
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 24/144 (16%)
Query: 38 LSSYYTRDDDRGALRGMRDTDSLGASY-DRYLRSAQISSYSGGQSARHMSGGMPSRPVDD 96
L+S Y R + LRG +GA Y + +++ YS A + SR + +
Sbjct: 37 LASPYPRFSNSAELRG------IGADYLQNDINLSRVGPYSSVDDA------VSSRVLSE 84
Query: 97 PRIVGIGGMDPGP---SAKDRALGLGGG-RSEVPLPPDA------SSTLFVEGLPSDCSR 146
P I G +D P + +D +LG+ SE P+P S+ LFV+ LP DC+R
Sbjct: 85 PNIKGYSPLD-DPVLRTKRDTSLGVNPDVSSERPIPKANREGLADSNVLFVDVLPRDCTR 143
Query: 147 REVAHIFRPFVGYKEVRLVSKESR 170
REV H+FRPF+GYK++R+V KE R
Sbjct: 144 REVGHLFRPFIGYKDIRVVHKEPR 167
>gi|357465775|ref|XP_003603172.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355492220|gb|AES73423.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 229
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 99 IVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVG 158
++G+ P P A + +P+ S+ LFV GLP DC+RREV H+FRPF+G
Sbjct: 99 LLGVSTGVPDPIANNERSISKSNYDALPVSAAESNILFVGGLPKDCTRREVGHLFRPFIG 158
Query: 159 YKEVRLVSKESRHV---SMIFLL 178
YK++++V KE R +MIF
Sbjct: 159 YKDIKVVHKEPRRSGDKAMIFCF 181
>gi|449447147|ref|XP_004141330.1| PREDICTED: uncharacterized protein LOC101211987 [Cucumis sativus]
gi|449486681|ref|XP_004157367.1| PREDICTED: uncharacterized protein LOC101228687 [Cucumis sativus]
Length = 246
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 37/45 (82%)
Query: 126 PLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
P P S+ LFV+GLP+DC+RREV H+FRPF+GYK++R+V KE R
Sbjct: 141 PSPLRESNVLFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPR 185
>gi|242045360|ref|XP_002460551.1| hypothetical protein SORBIDRAFT_02g030530 [Sorghum bicolor]
gi|241923928|gb|EER97072.1| hypothetical protein SORBIDRAFT_02g030530 [Sorghum bicolor]
Length = 122
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES-RHVSMI 175
G E LP DA+ST++VEGLP++C+RREVAHIFR ++G+ +RLV+K S RH+ +
Sbjct: 21 GAPEPSLPRDATSTIYVEGLPTNCTRREVAHIFRQYMGFLGMRLVNKGSNRHLCFV 76
>gi|356514689|ref|XP_003526036.1| PREDICTED: uncharacterized protein LOC100809186 [Glycine max]
Length = 228
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 5/60 (8%)
Query: 125 VPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH-----VSMIFLLF 179
+P+ S+ LFV GLP+DC+RREV H+FRPF+GYK++R+V KE R +++ F+ F
Sbjct: 113 LPISAADSNILFVGGLPNDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMTLCFVEF 172
>gi|363807398|ref|NP_001242381.1| uncharacterized protein LOC100816255 [Glycine max]
gi|255647054|gb|ACU23995.1| unknown [Glycine max]
Length = 220
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 42/60 (70%), Gaps = 5/60 (8%)
Query: 125 VPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH-----VSMIFLLF 179
+P+ S+ LFV GLP DC+RREV H+FRPF+GYK++R+V KE R +++ F+ F
Sbjct: 112 LPISAADSNILFVGGLPKDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMTLCFVEF 171
>gi|413953214|gb|AFW85863.1| nucleic acid binding protein [Zea mays]
Length = 248
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 29/124 (23%)
Query: 77 SGGQSARHMSGGMPSRPVDDPRIVGIGGMDP----GPSAKDRALGLGGGRSEV------- 125
+GG +AR SG + +DP + G+ G+ P GP A L + G S V
Sbjct: 120 TGGATARG-SGAL-----EDPSLAGLSGLAPARALGPRALKEELDVVGRSSSVGRGASIP 173
Query: 126 ------PLP------PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVS 173
+P + S+ LFV+ LP+DC+RREVAH+FR F G+K++R+V KE R VS
Sbjct: 174 DVEHHSSIPNFDGPSENESNILFVDCLPTDCTRREVAHLFRCFPGFKDIRVVHKEPRRVS 233
Query: 174 MIFL 177
L
Sbjct: 234 ACLL 237
>gi|384247133|gb|EIE20621.1| hypothetical protein COCSUDRAFT_83539 [Coccomyxa subellipsoidea
C-169]
Length = 321
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 101 GIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK 160
+ G PGP + + E LPP+A+ TLF+ GLP ++REVAHI RP G+K
Sbjct: 112 AMNGQRPGPQVE---IVQPEAEEEEVLPPEANPTLFLSGLPLKITKREVAHILRPCEGFK 168
Query: 161 EVRLVSKESRHVSMIFLLF 179
E+RLV K R+ + F
Sbjct: 169 ELRLVQKVDRNNKDVMWCF 187
>gi|255550095|ref|XP_002516098.1| conserved hypothetical protein [Ricinus communis]
gi|223544584|gb|EEF46100.1| conserved hypothetical protein [Ricinus communis]
Length = 243
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 35/39 (89%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
S+ LFV+GLP+DC+RREV H+FRPF+GYK+++++ +E R
Sbjct: 139 SNILFVDGLPTDCTRREVGHLFRPFIGYKDIKVIHREPR 177
>gi|294463261|gb|ADE77166.1| unknown [Picea sitchensis]
Length = 376
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 68/130 (52%), Gaps = 16/130 (12%)
Query: 53 GMRDTDSLGASYDRYLRSAQISSYSGGQSARHMSG---GMPSRPV-----DDPRIVGIGG 104
G R+ D L D + R I+ +GG A G G+ S+ V DD ++G G
Sbjct: 175 GWRERDPLIGGRDLF-RDKTING-TGGMHANDFEGTVLGIGSKRVHSASFDDTSLIGSGS 232
Query: 105 -MDPGPSAKDRALGLGGGRSEVPLPPDASST-----LFVEGLPSDCSRREVAHIFRPFVG 158
D G + +LG G ++ L + + LF++GLP DC+ RE AHIFRPF+G
Sbjct: 233 RFDRGMGSLQGSLGRDGHGRDIALTGGGADSAREPVLFIDGLPLDCTVREAAHIFRPFIG 292
Query: 159 YKEVRLVSKE 168
+KEVR+V KE
Sbjct: 293 FKEVRVVHKE 302
>gi|307109197|gb|EFN57435.1| hypothetical protein CHLNCDRAFT_142904 [Chlorella variabilis]
Length = 529
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 8/62 (12%)
Query: 119 GGGRSEV-------PLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES-R 170
GG R E+ PPDA +TL++EGLPSD +RRE+ HIFR G++ +RLV K+S +
Sbjct: 406 GGQRGEILAPTAMRQYPPDACNTLYIEGLPSDVTRRELGHIFRSREGFRSLRLVIKDSKK 465
Query: 171 HV 172
HV
Sbjct: 466 HV 467
>gi|212722122|ref|NP_001131419.1| uncharacterized protein LOC100192748 [Zea mays]
gi|194691466|gb|ACF79817.1| unknown [Zea mays]
Length = 270
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 29/117 (24%)
Query: 77 SGGQSARHMSGGMPSRPVDDPRIVGIGGMDP----GPSAKDRALGLGGGRSEV------- 125
+GG +AR SG + +DP + G+ G+ P GP A L + G S V
Sbjct: 120 TGGATARG-SGAL-----EDPSLAGLSGLAPARALGPRALKEELDVVGRSSSVGRGASIP 173
Query: 126 ------PLP------PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
+P + S+ LFV+ LP+DC+RREVAH+FR F G+K++R+V KE R
Sbjct: 174 DVEHHSSIPNFDGPSENESNILFVDCLPTDCTRREVAHLFRCFPGFKDIRVVHKEPR 230
>gi|226492197|ref|NP_001148276.1| LOC100281884 [Zea mays]
gi|195617106|gb|ACG30383.1| nucleic acid binding protein [Zea mays]
Length = 297
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 29/117 (24%)
Query: 77 SGGQSARHMSGGMPSRPVDDPRIVGIGGMDP----GPSAKDRALGLGGGRSEV------- 125
+GG +AR SG + +DP + G+ G+ P GP A L + G S V
Sbjct: 120 TGGATARG-SGAL-----EDPSLAGLSGLAPARALGPRALKEELDVVGRSSSVGRGASIP 173
Query: 126 ------PLP------PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
+P + S+ LFV+ LP+DC+RREVAH+FR F G+K++R+V KE R
Sbjct: 174 DVEHHSSIPNFDGPSENESNILFVDCLPTDCTRREVAHLFRCFPGFKDIRVVHKEPR 230
>gi|440800677|gb|ELR21712.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 341
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 24/111 (21%)
Query: 85 MSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVP----------------LP 128
++ G+P P+ G+ M PGP++ D + G+ + P L
Sbjct: 178 LTSGLPLVPM------GVSPMMPGPTSLDMS-GMQFYSTVAPNAQFASYVQPQAYSPQLS 230
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR-HVSMIFLL 178
PDA+ TL+VEGLP D + REVAHIFR GY +R+ KES+ H S +F L
Sbjct: 231 PDAAPTLYVEGLPLDATEREVAHIFRQMPGYLGIRIKPKESKQHPSRVFNL 281
>gi|145499741|ref|XP_001435855.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402991|emb|CAK68458.1| unnamed protein product [Paramecium tetraurelia]
Length = 124
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 107 PGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
P P ++ L + D++ +L+V+G+P+D REVAHIFRP+ G++ VRL+
Sbjct: 7 PNPMFNNQYFELIRDNQQFQPQKDSTHSLYVDGIPNDAQEREVAHIFRPYPGFQRVRLIK 66
Query: 167 KESRHVSMIFLLF 179
K+++ L F
Sbjct: 67 KQTQKGREYLLCF 79
>gi|302844823|ref|XP_002953951.1| hypothetical protein VOLCADRAFT_106208 [Volvox carteri f.
nagariensis]
gi|300260763|gb|EFJ44980.1| hypothetical protein VOLCADRAFT_106208 [Volvox carteri f.
nagariensis]
Length = 817
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 33/42 (78%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE 168
LP DA+++L++E LP+D + RE+ HIFRPF G+ +RLV KE
Sbjct: 467 LPSDATNSLYLENLPTDVTHRELTHIFRPFAGFVTLRLVVKE 508
>gi|303286151|ref|XP_003062365.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455882|gb|EEH53184.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 107
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
DAS TL++EG+P D + RE+AHIFRPF G++ RLV KE+ + F F
Sbjct: 14 DASPTLYIEGVPHDATVREIAHIFRPFDGFQSTRLVKKENVRGPLCFAEF 63
>gi|145491995|ref|XP_001431996.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399103|emb|CAK64598.1| unnamed protein product [Paramecium tetraurelia]
Length = 124
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 107 PGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
P P ++ L + +++ +L+V+G+P+D REVAHIFRP+ G++ VRL+
Sbjct: 7 PNPMFNNQYFELIRDNQQFQPQKESTHSLYVDGIPNDAQEREVAHIFRPYPGFQRVRLIK 66
Query: 167 KESRHVSMIFLLF 179
K+++ L F
Sbjct: 67 KQTQKGREYLLCF 79
>gi|147810268|emb|CAN75823.1| hypothetical protein VITISV_004156 [Vitis vinifera]
Length = 441
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 10/84 (11%)
Query: 94 VDDPRIVG-----IGGMDPGPSAKDRALGLGGGRSEVPLPPDA--SSTLFVEGLPSDCSR 146
+++P ++G G+ PG +R L R+ LPP S+ LFV+GLP +R
Sbjct: 289 LENPNLIGQRRDVAHGISPGIPDIERPNSL---RNVESLPPLVRESNILFVDGLPKYYTR 345
Query: 147 REVAHIFRPFVGYKEVRLVSKESR 170
REV H+F PF+ +KE+R+V KE R
Sbjct: 346 REVGHLFLPFIDFKEIRVVHKEPR 369
>gi|229595477|ref|XP_001017208.3| hypothetical protein TTHERM_00194550 [Tetrahymena thermophila]
gi|225565995|gb|EAR96963.3| hypothetical protein TTHERM_00194550 [Tetrahymena thermophila
SB210]
Length = 616
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 36/50 (72%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
+A+++L+V+G+P D + REV+HIFRPF G++ VRL+ K ++ + F
Sbjct: 452 EATNSLYVDGVPIDSNEREVSHIFRPFPGFQAVRLIRKRTQAGREFYFCF 501
>gi|403345552|gb|EJY72148.1| hypothetical protein OXYTRI_06855 [Oxytricha trifallax]
Length = 425
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 13/72 (18%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAH-------------IFRPFVGYKEVRLVSK 167
G + +P+P +A++T++VEG+P D S REVA IFRP+ G+K VRL+ +
Sbjct: 307 GPNIMPIPKNATNTVYVEGIPLDASEREVARKILSHFYQSFSLDIFRPYPGFKSVRLIPR 366
Query: 168 ESRHVSMIFLLF 179
E + + F
Sbjct: 367 EKKPGEKVIFCF 378
>gi|225429572|ref|XP_002280083.1| PREDICTED: uncharacterized protein LOC100257637 isoform 2 [Vitis
vinifera]
Length = 229
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 78 GGQSARHMSGGMPSRPVDDPRIVG-----IGGMDPGPSAKDRALGLGGGRSEVPLPPDAS 132
GG +A G P+ PV+DP ++G G+ PG +R G S +P P S
Sbjct: 81 GGFTATTNIKGYPN-PVEDPNLIGQRRDVAHGISPGIPDIERPSSFGNVES-LPPPVQES 138
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
+ LFV+GLP DC+RREV ++R+V KE RH
Sbjct: 139 NILFVDGLPKDCTRREVG----------QIRVVHKEPRH 167
>gi|110430655|gb|ABG73445.1| RNA recognition motif family protein [Oryza brachyantha]
Length = 237
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 40/161 (24%)
Query: 18 LPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYS 77
+PS +RP + +PSG E + L M + S Y +L + Y+
Sbjct: 65 VPSFKRQRPEY-FGMPSGQE---------NGACLEKMSQSSS--PIYGHHLNNK--IPYA 110
Query: 78 GGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFV 137
G + GGM P+ + ++G G+D +G R+ P DAS+
Sbjct: 111 GANQSAMPLGGMVGHPMHNNHMMGTTGLD--------NRNIGATRTNATSPRDASN---- 158
Query: 138 EGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLL 178
IFRPF G++EVRLV+KESRH LL
Sbjct: 159 --------------IFRPFSGFREVRLVNKESRHAGRYNLL 185
>gi|255075217|ref|XP_002501283.1| predicted protein [Micromonas sp. RCC299]
gi|226516547|gb|ACO62541.1| predicted protein [Micromonas sp. RCC299]
Length = 323
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV-SKESRHVSMIFLLF 179
+AS TL + G+P D + RE+ HIFRPF G++ RLV SK+ + F F
Sbjct: 229 NASPTLHISGVPKDATVREICHIFRPFDGFQSARLVPSKDPERGPLCFAEF 279
>gi|284795211|ref|NP_001165323.1| RNA binding protein with multiple splicing [Xenopus (Silurana)
tropicalis]
Length = 195
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
G + E+ LP + TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 10 GSQDEISLPEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 60
>gi|224049139|ref|XP_002196184.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Taeniopygia guttata]
Length = 195
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
GG ++ LP + TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 10 GGPADTSLPEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 60
>gi|281211458|gb|EFA85620.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 355
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
DA STLFV LP D + RE++ +FR G+ VRLV +E ++
Sbjct: 268 DACSTLFVSNLPKDVTERELSILFRFMRGFINVRLVQREGKY 309
>gi|328774045|gb|EGF84082.1| hypothetical protein BATDEDRAFT_84797 [Batrachochytrium
dendrobatidis JAM81]
Length = 262
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
SE LPP+ S LF++ LP+D + ++ +F F G+KEVRLV
Sbjct: 179 SEESLPPN--SILFIQNLPTDITNASLSALFNQFPGFKEVRLV 219
>gi|330840143|ref|XP_003292080.1| hypothetical protein DICPUDRAFT_89664 [Dictyostelium purpureum]
gi|325077715|gb|EGC31410.1| hypothetical protein DICPUDRAFT_89664 [Dictyostelium purpureum]
Length = 328
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLL 178
GG + P P TLFV LP D + REV+ +FR G+ +RL++KE + + M F
Sbjct: 236 GGHINSPPCP-----TLFVSNLPKDVTEREVSILFRFMAGFVGIRLINKEGK-LPMCFCD 289
Query: 179 F 179
F
Sbjct: 290 F 290
>gi|255564206|ref|XP_002523100.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
gi|223537662|gb|EEF39285.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
Length = 254
Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
GG +S E P PP+ + LF++ LP+D + + +F+ + G+KEVR+V
Sbjct: 166 GGAKSMVPEAPAPPN--NILFIQNLPNDTTTMVLQMLFQHYAGFKEVRMVE 214
>gi|2829909|gb|AAC00617.1| Hypothetical protein [Arabidopsis thaliana]
Length = 214
Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 28/93 (30%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYD--VPSGHELSS------------------ 40
MADGYW + ++ Q P KRPR+D+D PS E+++
Sbjct: 1 MADGYW---NQQRQQHHPPGGPMKRPRSDFDSYAPSLLEINNACRLVEAPSSTMTIGHGG 57
Query: 41 -YYTRDDDRGALRGMRDTDSLGASYDRYLRSAQ 72
YY RD+D + DT ++G++YDRYL+S Q
Sbjct: 58 GYYPRDEDLD----VPDTRTIGSAYDRYLQSVQ 86
>gi|147903173|ref|NP_001083477.1| RNA binding protein with multiple splicing [Xenopus laevis]
gi|38014401|gb|AAH60391.1| MGC68512 protein [Xenopus laevis]
Length = 200
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 124 EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
E+ LP + TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 14 EINLPEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 60
>gi|224068352|ref|XP_002302719.1| predicted protein [Populus trichocarpa]
gi|222844445|gb|EEE81992.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 118 LGGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
LGG +S E P PP+ + LF++ LP++ + + +F+ + G+KEVR+V
Sbjct: 162 LGGVKSMVPEAPAPPN--NILFIQNLPNETTTMMLQMLFQQYAGFKEVRMV 210
>gi|116791286|gb|ABK25922.1| unknown [Picea sitchensis]
Length = 345
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
D TLF+ GLP D RE+ ++FR F GY+ +L + E F +F
Sbjct: 80 DEVRTLFIAGLPDDVKHREIYNLFREFPGYRSCQLRNSEGGTQVYAFTVF 129
>gi|195456672|ref|XP_002075236.1| GK16926 [Drosophila willistoni]
gi|194171321|gb|EDW86222.1| GK16926 [Drosophila willistoni]
Length = 806
Score = 42.4 bits (98), Expect = 0.081, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMI 175
++ +FV+ LPSDC++ ++ IF+PF K+VRLV K ++ I
Sbjct: 628 TNKIFVKNLPSDCTKEQLTGIFKPFGTIKDVRLVFKFNKQFKGI 671
>gi|218198782|gb|EEC81209.1| hypothetical protein OsI_24241 [Oryza sativa Indica Group]
Length = 283
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 126 PLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
PLPP D TLF+ GLP D REV ++FR F GY L + + F +F
Sbjct: 61 PLPPRDELRTLFIAGLPGDAKAREVYNLFRDFPGYVSSHLRTSGKSSQAYAFAVF 115
>gi|222636114|gb|EEE66246.1| hypothetical protein OsJ_22424 [Oryza sativa Japonica Group]
Length = 283
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 126 PLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
PLPP D TLF+ GLP D REV ++FR F GY L + + F +F
Sbjct: 61 PLPPRDELRTLFIAGLPGDAKAREVYNLFRDFPGYVSSHLRTSGKSSQAYAFAVF 115
>gi|115469616|ref|NP_001058407.1| Os06g0687500 [Oryza sativa Japonica Group]
gi|52077025|dbj|BAD46058.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113596447|dbj|BAF20321.1| Os06g0687500 [Oryza sativa Japonica Group]
gi|215692539|dbj|BAG87959.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 219
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 126 PLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
PLPP D TLF+ GLP D REV ++FR F GY L + + F +F
Sbjct: 61 PLPPRDELRTLFIAGLPGDAKAREVYNLFRDFPGYVSSHLRTSGKSSQAYAFAVF 115
>gi|166240105|ref|XP_646953.2| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|165988745|gb|EAL73083.2| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 356
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 9/61 (14%)
Query: 127 LPPDAS--------STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLL 178
LPP +S STLFV LP D + RE++ +FR G+ +RL++KE + + M F
Sbjct: 258 LPPQSSISTTGMPCSTLFVSNLPKDVTERELSILFRFMRGFVGIRLINKEGK-LPMCFCD 316
Query: 179 F 179
F
Sbjct: 317 F 317
>gi|428171290|gb|EKX40208.1| hypothetical protein GUITHDRAFT_75811, partial [Guillardia theta
CCMP2712]
Length = 209
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
LF+E LP D + +VA +F PF G+KEVRLV
Sbjct: 151 ILFLENLPLDITSDDVAAVFSPFPGFKEVRLV 182
>gi|45382377|ref|NP_990200.1| RNA-binding protein with multiple splicing [Gallus gallus]
gi|13124483|sp|Q9W6I1.1|RBPMS_CHICK RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|4835860|gb|AAD30273.1|AF129933_1 RRM-type RNA-binding protein hermes [Gallus gallus]
Length = 200
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 112 KDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
KD GGG E + TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 6 KDTEHTNGGGNVE-----EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQ 59
>gi|452823467|gb|EME30477.1| U2 small nuclear ribonucleoprotein B'' [Galdieria sulphuraria]
Length = 250
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
LF+ G+P DCS +++ +F F GYKE RL + + R
Sbjct: 177 VLFIAGIPQDCSLQQLESLFVQFPGYKETRLAAGQER 213
>gi|328875060|gb|EGG23425.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 302
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 125 VPLPP----DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
VP PP D STLFV LP D + RE++ +FR G+ RLV +E ++
Sbjct: 203 VPPPPGQFKDPQSTLFVSNLPKDVTERELSILFRFMRGFISCRLVIREGKY 253
>gi|303281170|ref|XP_003059877.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458532|gb|EEH55829.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 224
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 110 SAKDRALGLGGGRSEVPLPPDA--SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
+AK A GGG + + P A + LFV+GLP + ++ +F+ F G+KEVR+V
Sbjct: 125 AAKAEAEARGGGSAPIRTDPSAPPNEILFVQGLPEATTAAMLSMLFQQFPGFKEVRMV 182
>gi|149057909|gb|EDM09152.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_c [Rattus norvegicus]
gi|149057914|gb|EDM09157.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_c [Rattus norvegicus]
gi|149057919|gb|EDM09162.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_c [Rattus norvegicus]
Length = 107
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 9/59 (15%)
Query: 119 GGGR-------SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
GGG+ SE L + TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 3 GGGKAEKENTPSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|406603206|emb|CCH45243.1| U1 small nuclear ribonucleoprotein [Wickerhamomyces ciferrii]
Length = 232
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
LPP+ L V+GLP D ++ E+ IF + G+ EVRLV+
Sbjct: 156 LPPN--KILLVQGLPKDVTQDELVEIFEKYNGFVEVRLVA 193
>gi|239790913|dbj|BAH71988.1| ACYPI002883 [Acyrthosiphon pisum]
Length = 169
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 28/39 (71%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
+ LFV+GLP C++ ++ +IF+P+ K+VR+V+ + H
Sbjct: 21 NKLFVKGLPFTCTKTDIENIFKPYGALKDVRVVTFRNGH 59
>gi|41053746|ref|NP_956553.1| RNA binding protein with multiple splicing 2b [Danio rerio]
gi|29124508|gb|AAH48876.1| RNA binding protein with multiple splicing 2 [Danio rerio]
gi|42542540|gb|AAH66414.1| Rbpms2 protein [Danio rerio]
gi|45126693|dbj|BAD12195.1| RNA binding protein [Danio rerio]
Length = 200
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP+D RE+ +FRPF GY+ ++L SK+
Sbjct: 21 TLFVSGLPTDIKPRELYLLFRPFKGYEGSLIKLTSKQ 57
>gi|167537765|ref|XP_001750550.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770971|gb|EDQ84646.1| predicted protein [Monosiga brevicollis MX1]
Length = 345
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
D S LF+E LPSD ++ + +F+ F G+KEVRLV
Sbjct: 267 DPSPILFLENLPSDRTQEMLTALFKEFPGFKEVRLV 302
>gi|91086239|ref|XP_972538.1| PREDICTED: similar to Squamous cell carcinoma antigen recognized by
T-cells 3 (SART-3) (mSART-3) (Tumor-rejection antigen
SART3) [Tribolium castaneum]
Length = 758
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK 167
++ LFV+GLP D S+ E+ IFRPF G K VRLV +
Sbjct: 627 TNKLFVKGLPYDKSQEEIEAIFRPF-GAKTVRLVCR 661
>gi|270009865|gb|EFA06313.1| hypothetical protein TcasGA2_TC009182 [Tribolium castaneum]
Length = 748
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK 167
++ LFV+GLP D S+ E+ IFRPF G K VRLV +
Sbjct: 617 TNKLFVKGLPYDKSQEEIEAIFRPF-GAKTVRLVCR 651
>gi|357482791|ref|XP_003611682.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355513017|gb|AES94640.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 340
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
TLF+ GLP D RE+ ++FR F GY+ L S + + F +F
Sbjct: 83 TLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPNNSSQAFAFAVF 128
>gi|440804858|gb|ELR25722.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 287
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 87 GGMPSRPVDDPRIVGIGGMDPGPSA-----KDRALGLGGGRSEVPLPPDASSTLFVEGLP 141
G+ P + P + G+ M P P A +DR L G+S V PP STLF+ L
Sbjct: 148 AGLAGYPFNPPSMYGLSSMGPVPDAYLLGGQDR-LPKPAGKSLVRFPP--GSTLFISNLG 204
Query: 142 SDCSRREVAHIFRPFVGYKEVRLVSK 167
+ S +E++ +F F G+ +L ++
Sbjct: 205 TASSEQEISEVFGAFQGFVRAQLYNR 230
>gi|293342475|ref|XP_001059526.2| PREDICTED: uncharacterized protein LOC498642 isoform 2 [Rattus
norvegicus]
Length = 197
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 9/59 (15%)
Query: 119 GGGRSEVPLPPDASS-------TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
GGG++E P ++ TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 3 GGGKAEKENTPSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|33342267|ref|NP_062707.1| RNA-binding protein with multiple splicing isoform 1 [Mus musculus]
gi|111185961|ref|NP_001036139.1| RNA-binding protein with multiple splicing isoform 2 [Mus musculus]
gi|20988889|gb|AAH30397.1| RNA binding protein gene with multiple splicing [Mus musculus]
gi|26334219|dbj|BAC30827.1| unnamed protein product [Mus musculus]
Length = 197
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 9/59 (15%)
Query: 119 GGGRSEVPLPPDASS-------TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
GGG++E P ++ TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 3 GGGKAEKENTPSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|85109011|ref|XP_962704.1| hypothetical protein NCU08034 [Neurospora crassa OR74A]
gi|28924315|gb|EAA33468.1| hypothetical protein NCU08034 [Neurospora crassa OR74A]
gi|39979161|emb|CAE85534.1| related to small nuclear ribonucleoprotein snRNP U1A [Neurospora
crassa]
Length = 247
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 18/87 (20%)
Query: 83 RHMSGGMP-SRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVP---LPPDASSTLFVE 138
R + G P +RP + R G+ GP+A VP LPP+ LFV+
Sbjct: 132 RPLQGAAPDARPAKNQRGAGLKATGQGPAAV------------VPDEYLPPN--RILFVQ 177
Query: 139 GLPSDCSRREVAHIFRPFVGYKEVRLV 165
LP D ++ ++ IF F G++EVR V
Sbjct: 178 NLPDDFTKDDLTTIFSRFDGFREVRTV 204
>gi|119583856|gb|EAW63452.1| hCG14793, isoform CRA_b [Homo sapiens]
Length = 143
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
SE L + TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 14 SEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|13124485|sp|Q9WVB0.1|RBPMS_MOUSE RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|5081739|gb|AAD39515.1|AF148511_1 hermes [Mus musculus]
Length = 197
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 9/59 (15%)
Query: 119 GGGRSEVPLPPDASS-------TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
GGG++E P ++ TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 3 GGGKAEKENTPSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|281205884|gb|EFA80073.1| hypothetical protein PPL_06895 [Polysphondylium pallidum PN500]
Length = 639
Score = 40.4 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
DA++TLF LP D + RE++ +FR G+ VRLV ++ ++
Sbjct: 551 DANTTLFFSNLPKDVTERELSILFRFMRGFLNVRLVQRDGKY 592
>gi|328697641|ref|XP_003240396.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like isoform 2 [Acyrthosiphon pisum]
Length = 854
Score = 40.4 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 27/37 (72%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
LFV+GLP C++ ++ +IF+P+ K+VR+V+ + H
Sbjct: 708 LFVKGLPFTCTKTDIENIFKPYGALKDVRVVTFRNGH 744
>gi|328697639|ref|XP_001946245.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like isoform 1 [Acyrthosiphon pisum]
Length = 854
Score = 40.4 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 27/37 (72%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
LFV+GLP C++ ++ +IF+P+ K+VR+V+ + H
Sbjct: 708 LFVKGLPFTCTKTDIENIFKPYGALKDVRVVTFRNGH 744
>gi|26347873|dbj|BAC37585.1| unnamed protein product [Mus musculus]
Length = 170
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 9/59 (15%)
Query: 119 GGGRSEVPLPPDASS-------TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
GGG++E P ++ TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 3 GGGKAEKENTPSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|225438787|ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
Length = 336
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
D TLF+ GLP D RE+ ++FR F GY+ L S F +F
Sbjct: 78 DEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQNSQPFAFAVF 127
>gi|301619063|ref|XP_002938921.1| PREDICTED: hypothetical protein LOC100038109 [Xenopus (Silurana)
tropicalis]
Length = 199
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 21 TLFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSKQ 57
>gi|296082378|emb|CBI21383.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
D TLF+ GLP D RE+ ++FR F GY+ L S F +F
Sbjct: 75 DEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQNSQPFAFAVF 124
>gi|327279916|ref|XP_003224701.1| PREDICTED: RNA-binding protein with multiple splicing-like [Anolis
carolinensis]
Length = 255
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 126 PLPPDAS------STLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
P PP+ S TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 69 PTPPEPSLTEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 119
>gi|330842469|ref|XP_003293200.1| hypothetical protein DICPUDRAFT_83777 [Dictyostelium purpureum]
gi|325076492|gb|EGC30273.1| hypothetical protein DICPUDRAFT_83777 [Dictyostelium purpureum]
Length = 233
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
LPP+ TLFVE LP C + +F F GYKEV +V
Sbjct: 155 LPPN--KTLFVENLPDKCDPMMLEMLFSQFPGYKEVHMV 191
>gi|111185959|ref|NP_001036140.1| RNA-binding protein with multiple splicing isoform 3 [Mus musculus]
gi|403420640|ref|NP_001258173.1| RNA-binding protein with multiple splicing [Rattus norvegicus]
gi|12848898|dbj|BAB28128.1| unnamed protein product [Mus musculus]
gi|12849426|dbj|BAB28336.1| unnamed protein product [Mus musculus]
Length = 220
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 9/59 (15%)
Query: 119 GGGRSEVPLPPDASS-------TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
GGG++E P ++ TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 3 GGGKAEKENTPSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|356541768|ref|XP_003539345.1| PREDICTED: uncharacterized protein LOC100780983 [Glycine max]
Length = 338
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
TLFV GLP D RE+ ++FR F GY+ L S + F +F
Sbjct: 80 TLFVAGLPEDVKPREIYNLFREFPGYESSHLRSPSNSSQPFAFAVF 125
>gi|224062243|ref|XP_002193531.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Taeniopygia guttata]
Length = 167
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 5 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQ 41
>gi|297724471|ref|NP_001174599.1| Os06g0148000 [Oryza sativa Japonica Group]
gi|55297048|dbj|BAD68617.1| unknown protein [Oryza sativa Japonica Group]
gi|55297147|dbj|BAD68790.1| unknown protein [Oryza sativa Japonica Group]
gi|215765432|dbj|BAG87129.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676715|dbj|BAH93327.1| Os06g0148000 [Oryza sativa Japonica Group]
Length = 150
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIF 153
D S+ LFV+GLP+DC+RREVA I
Sbjct: 125 DESNILFVDGLPTDCTRREVARIL 148
>gi|301619061|ref|XP_002938920.1| PREDICTED: hypothetical protein LOC100038109 [Xenopus (Silurana)
tropicalis]
Length = 198
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 21 TLFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSKQ 57
>gi|348526652|ref|XP_003450833.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Oreochromis niloticus]
Length = 199
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 21 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQ 57
>gi|320591314|gb|EFX03753.1| U1 small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 236
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
LPP+ TLFV+ LP DC + IF + G++EVRLV
Sbjct: 157 LPPN--KTLFVQNLPEDCDADVLTGIFGRYEGFREVRLV 193
>gi|313232434|emb|CBY24102.1| unnamed protein product [Oikopleura dioica]
Length = 300
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
D TLFV GLPSD +RE+ +FRP+ G++ L
Sbjct: 60 DEVRTLFVSGLPSDVKQRELRLLFRPYKGFESAVL 94
>gi|147802946|emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera]
Length = 335
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
D TLF+ GLP D RE+ ++FR F GY+ L S F +F
Sbjct: 75 DEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQNSQPFAFAVF 124
>gi|50539886|ref|NP_001002409.1| RNA binding protein with multiple splicing 2 [Danio rerio]
gi|166158150|ref|NP_001107477.1| uncharacterized protein LOC100135328 [Xenopus (Silurana)
tropicalis]
gi|49902931|gb|AAH76171.1| Zgc:92689 [Danio rerio]
gi|156230446|gb|AAI52179.1| Zgc:92689 [Danio rerio]
gi|163915769|gb|AAI57627.1| LOC100135328 protein [Xenopus (Silurana) tropicalis]
Length = 199
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 21 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQ 57
>gi|410912397|ref|XP_003969676.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Takifugu rubripes]
Length = 259
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 91 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQ 127
>gi|148222884|ref|NP_001087735.1| RNA binding protein with multiple splicing 2 [Xenopus laevis]
gi|51703926|gb|AAH81153.1| MGC84222 protein [Xenopus laevis]
Length = 197
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 21 TLFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSKQ 57
>gi|223648622|gb|ACN11069.1| RNA-binding protein with multiple splicing [Salmo salar]
Length = 200
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 22 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQ 58
>gi|449273343|gb|EMC82847.1| RNA-binding protein with multiple splicing, partial [Columba livia]
Length = 180
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 3 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQ 39
>gi|397521591|ref|XP_003830876.1| PREDICTED: RNA-binding protein with multiple splicing [Pan
paniscus]
Length = 218
Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 18/70 (25%)
Query: 117 GLGGGRSEVPLPPDASS----------------TLFVEGLPSDCSRREVAHIFRPFVGYK 160
G GG R V L P AS+ TLFV GLP D RE+ +FRPF GY+
Sbjct: 31 GEGGSRERVFLCPRASAGPKLRNSKDFSETFVRTLFVSGLPLDIKPRELYLLFRPFKGYE 90
Query: 161 --EVRLVSKE 168
++L SK+
Sbjct: 91 GSLIKLTSKQ 100
>gi|326926326|ref|XP_003209353.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Meleagris gallopavo]
Length = 204
Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 27 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQ 63
>gi|317106697|dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas]
Length = 316
Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
P D TLFV GLP D RE+ ++FR F GY+ L S F F
Sbjct: 71 PHDPVRTLFVAGLPDDVKPREIYNLFREFPGYESSHLRSPTQTSQPFAFATF 122
>gi|119583864|gb|EAW63460.1| hCG2043421, isoform CRA_c [Homo sapiens]
gi|194389216|dbj|BAG65596.1| unnamed protein product [Homo sapiens]
Length = 224
Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
SE L + TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 14 SEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|297299182|ref|XP_002805345.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Macaca mulatta]
gi|297299184|ref|XP_001083170.2| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Macaca mulatta]
Length = 224
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
SE L + TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 14 SEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|395502670|ref|XP_003755700.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Sarcophilus harrisii]
Length = 207
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 30 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQ 66
>gi|355715882|gb|AES05433.1| RNA binding protein with multiple splicing [Mustela putorius furo]
Length = 173
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 3 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 39
>gi|301770903|ref|XP_002920867.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Ailuropoda melanoleuca]
Length = 195
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Query: 118 LGGGRSEVPLPPDASS-------TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
+ GG++E P+ ++ TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 1 MXGGKAEKENTPNEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 60
>gi|402874657|ref|XP_003901146.1| PREDICTED: uncharacterized protein LOC101014530 [Papio anubis]
Length = 427
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
G S VPL + TLFV GLP D RE+ +FRPF GY E L+ +R + F++F
Sbjct: 237 GASSLVPLKKEVR-TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQ-PVGFVIF 293
>gi|395541849|ref|XP_003772849.1| PREDICTED: RNA-binding protein with multiple splicing [Sarcophilus
harrisii]
Length = 188
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 17 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 53
>gi|356573171|ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Glycine max]
Length = 241
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
GG +S E P PP+ + LF++ LP+D + + +F + G+KEVR+V
Sbjct: 152 GGAKSMVPEAPAPPN--NILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVE 200
>gi|255647418|gb|ACU24174.1| unknown [Glycine max]
Length = 241
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
GG +S E P PP+ + LF++ LP+D + + +F + G+KEVR+V
Sbjct: 152 GGAKSMVPEAPAPPN--NILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVE 200
>gi|119583863|gb|EAW63459.1| hCG2043421, isoform CRA_b [Homo sapiens]
gi|119583865|gb|EAW63461.1| hCG2043421, isoform CRA_b [Homo sapiens]
Length = 179
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|345314045|ref|XP_001507449.2| PREDICTED: RNA-binding protein with multiple splicing-like, partial
[Ornithorhynchus anatinus]
Length = 123
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 3 TLFVSGLPMDIKPRELYLLFRPFKGYEGSLIKLTSKQ 39
>gi|148223487|ref|NP_001081864.1| RNA-binding protein with multiple splicing [Xenopus laevis]
gi|13124486|sp|Q9YGP5.1|RBPMS_XENLA RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|4324639|gb|AAD16971.1| RRM-type RNA-binding protein hermes [Xenopus laevis]
gi|66912013|gb|AAH97507.1| LOC398092 protein [Xenopus laevis]
Length = 196
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 21 TLFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSKQ 57
>gi|403221977|dbj|BAM40109.1| U1/2 small nuclear ribonucleoprotein [Theileria orientalis strain
Shintoku]
Length = 206
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMI 175
+ S TLFVE +PSD S+ + +FR + G+K R + E R+V+ +
Sbjct: 131 EESHTLFVENIPSDMSKDSLELLFRQYPGFKNCRFI--EGRYVAFV 174
>gi|327285368|ref|XP_003227406.1| PREDICTED: RNA-binding protein with multiple splicing-like, partial
[Anolis carolinensis]
Length = 194
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 3 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQ 39
>gi|213513247|ref|NP_001133590.1| RNA-binding protein with multiple splicing [Salmo salar]
gi|209154600|gb|ACI33532.1| RNA-binding protein with multiple splicing [Salmo salar]
Length = 201
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 23 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQ 59
>gi|194226464|ref|XP_001915758.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Equus caballus]
gi|350593440|ref|XP_003483688.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Sus scrofa]
gi|410956133|ref|XP_003984699.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Felis catus]
Length = 196
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 9/59 (15%)
Query: 119 GGGRSEVPLPPDASS-------TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
GG++E P+ ++ TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 3 NGGKAEKENTPNEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|351722454|ref|NP_001235453.1| uncharacterized protein LOC100500002 [Glycine max]
gi|255628437|gb|ACU14563.1| unknown [Glycine max]
Length = 241
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
GG +S E P PP+ + LF++ LP+D + + +F + G+KEVR+V
Sbjct: 152 GGAKSMVPEAPAPPN--NILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVE 200
>gi|126277363|ref|XP_001375205.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Monodelphis domestica]
Length = 257
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 34 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQ 70
>gi|85000071|ref|XP_954754.1| U1 snRNP protein [Theileria annulata strain Ankara]
gi|65302900|emb|CAI75278.1| U1 snRNP protein, putative [Theileria annulata]
Length = 346
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMI 175
TLFVE LP + S +V ++F G+ E +L++ S+HV+ I
Sbjct: 250 TLFVENLPDNISHNDVNNLFHNMPGFVETKLIA--SKHVAFI 289
>gi|212723796|ref|NP_001132012.1| uncharacterized protein LOC100193418 [Zea mays]
gi|194693198|gb|ACF80683.1| unknown [Zea mays]
gi|413934627|gb|AFW69178.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
gi|413934628|gb|AFW69179.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 203
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 122 RSEVPLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES 169
R+E LP D TLF+ GLP+D REV ++FR F GY L + +S
Sbjct: 46 RAEQALPARDEVRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLRTGKS 94
>gi|363733276|ref|XP_426296.3| PREDICTED: RNA-binding protein with multiple splicing [Gallus
gallus]
Length = 186
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 15 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 51
>gi|348553688|ref|XP_003462658.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Cavia porcellus]
Length = 196
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|5803141|ref|NP_006858.1| RNA-binding protein with multiple splicing isoform A [Homo sapiens]
gi|57164969|ref|NP_001008710.1| RNA-binding protein with multiple splicing isoform A [Homo sapiens]
gi|291386102|ref|XP_002709595.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Oryctolagus cuniculus]
gi|395850272|ref|XP_003797718.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Otolemur garnettii]
gi|13124469|sp|Q93062.1|RBPMS_HUMAN RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|1669547|dbj|BAA12225.1| RBP-MS/type 1 [Homo sapiens]
gi|1669553|dbj|BAA12228.1| RBP-MS/type 4 [Homo sapiens]
gi|119583855|gb|EAW63451.1| hCG14793, isoform CRA_a [Homo sapiens]
gi|119583857|gb|EAW63453.1| hCG14793, isoform CRA_a [Homo sapiens]
gi|383415403|gb|AFH30915.1| RNA-binding protein with multiple splicing isoform A [Macaca
mulatta]
gi|410212520|gb|JAA03479.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253370|gb|JAA14652.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294226|gb|JAA25713.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342393|gb|JAA40143.1| RNA binding protein with multiple splicing [Pan troglodytes]
Length = 196
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|407923615|gb|EKG16684.1| hypothetical protein MPH_06138 [Macrophomina phaseolina MS6]
Length = 117
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Query: 109 PSAKDRALGL---GGGRSEVP---LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEV 162
P+ K R GL GG + +P LPP+ LFV+ LP ++ IF F G+KEV
Sbjct: 14 PTQKARGAGLKSTGGAAAVIPDEYLPPN--KILFVQNLPDGYDVEALSAIFGRFEGFKEV 71
Query: 163 RLV 165
RLV
Sbjct: 72 RLV 74
>gi|344281668|ref|XP_003412600.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Loxodonta africana]
Length = 196
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|402877940|ref|XP_003902666.1| PREDICTED: RNA-binding protein with multiple splicing, partial
[Papio anubis]
Length = 268
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 12/62 (19%)
Query: 119 GGGRSEVP-LPPDASS---------TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVS 166
GGG SE P L P S TLFV GLP D RE+ +FRPF GY+ ++L S
Sbjct: 49 GGGPSESPGLEPAVRSPRVLRATVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTS 108
Query: 167 KE 168
K+
Sbjct: 109 KQ 110
>gi|57164971|ref|NP_001008711.1| RNA-binding protein with multiple splicing isoform B [Homo sapiens]
gi|1669549|dbj|BAA12226.1| RBP-MS/type 2 [Homo sapiens]
gi|119583858|gb|EAW63454.1| hCG14793, isoform CRA_c [Homo sapiens]
Length = 204
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|126330763|ref|XP_001372734.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Monodelphis domestica]
Length = 186
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 15 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 51
>gi|326532978|dbj|BAJ89334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 122 RSEVPLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
R+E PP D TLF+ GLP+D REV ++FR F GY + S +S S F +F
Sbjct: 56 RAEPLAPPRDELRTLFIAGLPADVKPREVYNLFRDFPGYVSSHVRSGKSAQ-SYAFAVF 113
>gi|326918450|ref|XP_003205501.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Meleagris gallopavo]
Length = 233
Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 62 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 98
>gi|432851215|ref|XP_004066912.1| PREDICTED: RNA-binding protein with multiple splicing-like [Oryzias
latipes]
Length = 264
Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 86 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQ 122
>gi|313221526|emb|CBY32273.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
D TLFV GLPSD +RE+ +FRP+ G++ L
Sbjct: 77 DEVRTLFVSGLPSDVKQRELRLLFRPYKGFESAVL 111
>gi|410925168|ref|XP_003976053.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Takifugu rubripes]
Length = 194
Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 24 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 60
>gi|396465284|ref|XP_003837250.1| hypothetical protein LEMA_P034840.1 [Leptosphaeria maculans JN3]
gi|312213808|emb|CBX93810.1| hypothetical protein LEMA_P034840.1 [Leptosphaeria maculans JN3]
Length = 184
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
+ TLF++ +P D + ++F F G+KEVRLVS
Sbjct: 108 NKTLFLQNIPRDVDEETLTNVFERFEGFKEVRLVS 142
>gi|431902282|gb|ELK08783.1| RNA-binding protein with multiple splicing [Pteropus alecto]
Length = 275
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 81 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 117
>gi|194697902|gb|ACF83035.1| unknown [Zea mays]
gi|413934630|gb|AFW69181.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 306
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 122 RSEVPLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
R+E LP D TLF+ GLP+D REV ++FR F GY L + +S + F +F
Sbjct: 46 RAEQALPARDEVRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLRTGKSSQ-AYAFAVF 103
>gi|148703476|gb|EDL35423.1| RNA binding protein gene with multiple splicing, isoform CRA_a [Mus
musculus]
gi|148703477|gb|EDL35424.1| RNA binding protein gene with multiple splicing, isoform CRA_a [Mus
musculus]
Length = 175
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 3 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 39
>gi|395850274|ref|XP_003797719.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Otolemur garnettii]
Length = 242
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
SE L + TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 14 SEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|452003034|gb|EMD95491.1| hypothetical protein COCHEDRAFT_1200551 [Cochliobolus
heterostrophus C5]
Length = 244
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
+ TLF++ +P D ++ IF F G+KEVRLVS
Sbjct: 168 NKTLFLQNIPRDVDEDDLTSIFERFEGFKEVRLVS 202
>gi|451856476|gb|EMD69767.1| hypothetical protein COCSADRAFT_155918 [Cochliobolus sativus
ND90Pr]
Length = 244
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
+ TLF++ +P D ++ IF F G+KEVRLVS
Sbjct: 168 NKTLFLQNIPRDVDEDDLTTIFERFEGFKEVRLVS 202
>gi|354474967|ref|XP_003499701.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Cricetulus griseus]
Length = 181
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 9 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 45
>gi|219121341|ref|XP_002185896.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582745|gb|ACI65366.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 226
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 124 EVPLPPDA---SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
++P P D S L + LPSDC+ + +FR + GYKEVR+
Sbjct: 142 DMPSPQDTAPPSKYLLAQNLPSDCNEMMLGMLFRQYSGYKEVRM 185
>gi|384247265|gb|EIE20752.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 129
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHVSMI 175
LPP+ + L+V LP + S E+ IF F G +++RL SKE+R + +
Sbjct: 10 LPPEVNRVLYVRNLPFNISSEEMYDIFGKFGGVRQIRLGTSKETRGTAYV 59
>gi|413934629|gb|AFW69180.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 208
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 122 RSEVPLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGY 159
R+E LP D TLF+ GLP+D REV ++FR F GY
Sbjct: 46 RAEQALPARDEVRTLFIAGLPADAKPREVYNLFRDFPGY 84
>gi|449525690|ref|XP_004169849.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Cucumis sativus]
Length = 306
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 125 VPLPPDASS-----TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
+PL P +S TLF+ GLP D RE+ ++FR F GY+ L + F +F
Sbjct: 55 LPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVF 114
>gi|296472388|tpg|DAA14503.1| TPA: RNA-binding protein with multiple splicing [Bos taurus]
gi|440895026|gb|ELR47324.1| RNA-binding protein with multiple splicing [Bos grunniens mutus]
Length = 219
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|114052324|ref|NP_001040000.1| RNA-binding protein with multiple splicing [Bos taurus]
gi|86438185|gb|AAI12765.1| RNA binding protein with multiple splicing [Bos taurus]
Length = 219
Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|432919028|ref|XP_004079709.1| PREDICTED: RNA-binding protein with multiple splicing-like [Oryzias
latipes]
Length = 194
Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 24 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 60
>gi|348525747|ref|XP_003450383.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Oreochromis niloticus]
Length = 194
Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 24 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 60
>gi|225716164|gb|ACO13928.1| RNA-binding protein with multiple splicing [Esox lucius]
Length = 100
Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 22 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQ 58
>gi|426256354|ref|XP_004021805.1| PREDICTED: RNA-binding protein with multiple splicing [Ovis aries]
Length = 198
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 4 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 40
>gi|344281670|ref|XP_003412601.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Loxodonta africana]
Length = 219
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|417397319|gb|JAA45693.1| Putative rna-binding protein with multiple splicing-like isoform 2
equus caballus [Desmodus rotundus]
Length = 219
Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|242093984|ref|XP_002437482.1| hypothetical protein SORBIDRAFT_10g027920 [Sorghum bicolor]
gi|241915705|gb|EER88849.1| hypothetical protein SORBIDRAFT_10g027920 [Sorghum bicolor]
Length = 310
Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 122 RSEVPLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES 169
R+E LP D TLF+ GLP+D REV ++FR F GY L + +S
Sbjct: 50 RAEQALPARDELRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLRTGKS 98
>gi|281347421|gb|EFB23005.1| hypothetical protein PANDA_009679 [Ailuropoda melanoleuca]
gi|351701272|gb|EHB04191.1| RNA-binding protein with multiple splicing, partial [Heterocephalus
glaber]
gi|355697845|gb|EHH28393.1| hypothetical protein EGK_18822, partial [Macaca mulatta]
gi|355779616|gb|EHH64092.1| hypothetical protein EGM_17218, partial [Macaca fascicularis]
Length = 198
Score = 38.9 bits (89), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 4 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 40
>gi|403294314|ref|XP_003938139.1| PREDICTED: RNA-binding protein with multiple splicing [Saimiri
boliviensis boliviensis]
Length = 219
Score = 38.9 bits (89), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|119583862|gb|EAW63458.1| hCG2043421, isoform CRA_a [Homo sapiens]
Length = 200
Score = 38.9 bits (89), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 6 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 42
>gi|350578519|ref|XP_003121510.3| PREDICTED: RNA-binding protein with multiple splicing 2-like [Sus
scrofa]
Length = 327
Score = 38.9 bits (89), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
TLFV GLP D RE+ +FRPF GY E L+ SR + F++F
Sbjct: 149 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQ-PVGFVIF 192
>gi|338720949|ref|XP_003364277.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Equus caballus]
gi|350593442|ref|XP_003133441.3| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Sus scrofa]
gi|410956131|ref|XP_003984698.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Felis catus]
Length = 219
Score = 38.9 bits (89), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|390473655|ref|XP_002756964.2| PREDICTED: RNA-binding protein with multiple splicing [Callithrix
jacchus]
Length = 219
Score = 38.9 bits (89), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|348553686|ref|XP_003462657.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Cavia porcellus]
Length = 219
Score = 38.9 bits (89), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|332240824|ref|XP_003269587.1| PREDICTED: RNA-binding protein with multiple splicing [Nomascus
leucogenys]
Length = 219
Score = 38.9 bits (89), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|62203475|gb|AAH92476.1| RNA binding protein with multiple splicing [Homo sapiens]
Length = 219
Score = 38.9 bits (89), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|57164973|ref|NP_001008712.1| RNA-binding protein with multiple splicing isoform C [Homo sapiens]
gi|332825789|ref|XP_001167950.2| PREDICTED: RNA-binding protein with multiple splicing [Pan
troglodytes]
gi|345781578|ref|XP_532815.3| PREDICTED: RNA-binding protein with multiple splicing [Canis lupus
familiaris]
gi|395739552|ref|XP_002819013.2| PREDICTED: RNA-binding protein with multiple splicing [Pongo
abelii]
gi|1669551|dbj|BAA12227.1| RBP-MS/type 3 [Homo sapiens]
gi|13177644|gb|AAH03608.1| RNA binding protein with multiple splicing [Homo sapiens]
gi|119583866|gb|EAW63462.1| hCG2043421, isoform CRA_d [Homo sapiens]
gi|261858762|dbj|BAI45903.1| RNA binding protein with multiple splicing [synthetic construct]
gi|383415405|gb|AFH30916.1| RNA-binding protein with multiple splicing isoform C [Macaca
mulatta]
gi|387541276|gb|AFJ71265.1| RNA-binding protein with multiple splicing isoform C [Macaca
mulatta]
gi|410212518|gb|JAA03478.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410212522|gb|JAA03480.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253368|gb|JAA14651.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253372|gb|JAA14653.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294224|gb|JAA25712.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294228|gb|JAA25714.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342391|gb|JAA40142.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342395|gb|JAA40144.1| RNA binding protein with multiple splicing [Pan troglodytes]
Length = 219
Score = 38.9 bits (89), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|224094288|ref|XP_002310126.1| predicted protein [Populus trichocarpa]
gi|222853029|gb|EEE90576.1| predicted protein [Populus trichocarpa]
Length = 323
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
+P D TLFV GLP D RE+ ++FR F GY+ L + F F
Sbjct: 67 VPHDQVRTLFVAGLPDDIKPREMYNLFREFPGYESSHLRTPSQNSQPFAFATF 119
>gi|429864037|gb|ELA38421.1| u1 small nuclear [Colletotrichum gloeosporioides Nara gc5]
Length = 247
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 17/80 (21%)
Query: 89 MPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVP---LPPDASSTLFVEGLPSDCS 145
M RP R G+ +P +A VP LPP+ LFV+ LP D
Sbjct: 140 MTGRPAKAARGTGLKSTNPSATAV------------VPDEYLPPN--KILFVQNLPDDYD 185
Query: 146 RREVAHIFRPFVGYKEVRLV 165
V IF F G++EVRLV
Sbjct: 186 IEAVTSIFGRFEGFREVRLV 205
>gi|348683636|gb|EGZ23451.1| hypothetical protein PHYSODRAFT_484798 [Phytophthora sojae]
Length = 236
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
+ LF+E LP C++ ++ +F+ + G+KEVR+V
Sbjct: 161 NKILFLEALPESCNKEMLSVLFKQYQGFKEVRMV 194
>gi|291386104|ref|XP_002709596.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Oryctolagus cuniculus]
Length = 219
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
>gi|66806007|ref|XP_636725.1| U2 small nuclear ribonucleoprotein B [Dictyostelium discoideum AX4]
gi|74996697|sp|Q54J05.1|RU2B_DICDI RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|60465122|gb|EAL63221.1| U2 small nuclear ribonucleoprotein B [Dictyostelium discoideum AX4]
Length = 241
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
PP+ TLFVE LP C ++ +F F G+KEV +V
Sbjct: 164 PPN--KTLFVENLPDKCDSMMLSMLFSQFQGFKEVHMV 199
>gi|148703479|gb|EDL35426.1| RNA binding protein gene with multiple splicing, isoform CRA_c [Mus
musculus]
Length = 198
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 3 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 39
>gi|281347320|gb|EFB22904.1| hypothetical protein PANDA_002166 [Ailuropoda melanoleuca]
Length = 163
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L S++
Sbjct: 4 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQ 40
>gi|440907032|gb|ELR57225.1| RNA-binding protein with multiple splicing 2, partial [Bos
grunniens mutus]
Length = 184
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L S++
Sbjct: 7 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQ 43
>gi|171690714|ref|XP_001910282.1| hypothetical protein [Podospora anserina S mat+]
gi|170945305|emb|CAP71417.1| unnamed protein product [Podospora anserina S mat+]
Length = 248
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 109 PSAKDRALGL----GGGRSEVP---LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKE 161
P+ R GL G + VP LPP+ LFV+ LP D + E+ IF F G++E
Sbjct: 144 PTKNARGAGLKSTGAGAAAVVPDEYLPPN--RILFVQNLPDDFGKDELTGIFSRFEGFRE 201
Query: 162 VRLV 165
VR V
Sbjct: 202 VRTV 205
>gi|194670736|ref|XP_596374.4| PREDICTED: RNA-binding protein with multiple splicing 2 [Bos
taurus]
gi|297479609|ref|XP_002690918.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Bos
taurus]
gi|296483268|tpg|DAA25383.1| TPA: RNA binding protein with multiple splicing 2-like [Bos taurus]
Length = 188
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L S++
Sbjct: 11 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQ 47
>gi|426234121|ref|XP_004011049.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Ovis
aries]
Length = 270
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
TLFV GLP D RE+ +FRPF GY E L+ SR + F++F
Sbjct: 93 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQ-PVGFVIF 136
>gi|354504963|ref|XP_003514542.1| PREDICTED: RNA-binding protein with multiple splicing 2-like,
partial [Cricetulus griseus]
Length = 181
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L S++
Sbjct: 3 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQ 39
>gi|345795064|ref|XP_853385.2| PREDICTED: RNA-binding protein with multiple splicing 2 [Canis
lupus familiaris]
Length = 214
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L S++
Sbjct: 36 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQ 72
>gi|301756893|ref|XP_002914317.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Ailuropoda melanoleuca]
Length = 296
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
TLFV GLP D RE+ +FRPF GY E L+ SR + F++F
Sbjct: 118 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQ-PVGFVIF 161
>gi|344293499|ref|XP_003418460.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Loxodonta africana]
Length = 183
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L S++
Sbjct: 7 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQ 43
>gi|330933232|ref|XP_003304096.1| hypothetical protein PTT_16533 [Pyrenophora teres f. teres 0-1]
gi|311319509|gb|EFQ87793.1| hypothetical protein PTT_16533 [Pyrenophora teres f. teres 0-1]
Length = 244
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
+ TLF++ +P D + IF F G+KEVRLVS
Sbjct: 168 NKTLFLQNIPRDVDEDTLTTIFERFEGFKEVRLVS 202
>gi|118485733|gb|ABK94716.1| unknown [Populus trichocarpa]
Length = 254
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
GG +S E P PP+ + LF++ LP++ + + +F+ + G+KEVR+V
Sbjct: 165 GGVKSMVPEAPAPPN--NILFIQNLPNETTPMMLQMLFQQYPGFKEVRMVE 213
>gi|148703478|gb|EDL35425.1| RNA binding protein gene with multiple splicing, isoform CRA_b [Mus
musculus]
Length = 227
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 32 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 68
>gi|189205961|ref|XP_001939315.1| U2 small nuclear ribonucleoprotein B [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975408|gb|EDU42034.1| U2 small nuclear ribonucleoprotein B [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 244
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
+ TLF++ +P D + IF F G+KEVRLVS
Sbjct: 168 NKTLFLQNIPRDVDEDTLTAIFERFEGFKEVRLVS 202
>gi|351695575|gb|EHA98493.1| RNA-binding protein with multiple splicing 2, partial
[Heterocephalus glaber]
Length = 180
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L S++
Sbjct: 4 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQ 40
>gi|326669776|ref|XP_003199078.1| PREDICTED: RNA-binding protein with multiple splicing-like [Danio
rerio]
Length = 183
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++ SK+
Sbjct: 22 TLFVSGLPMDIKPRELYLLFRPFQGYEGSLIKFTSKQ 58
>gi|348588625|ref|XP_003480065.1| PREDICTED: RNA-binding protein with multiple splicing 2-like [Cavia
porcellus]
Length = 295
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
TLFV GLP D RE+ +FRPF GY E L+ SR + F++F
Sbjct: 120 TLFVSGLPMDIKPRELYLLFRPFKGY-EGSLIKLTSRQ-PVGFVIF 163
>gi|444730929|gb|ELW71298.1| RNA-binding protein with multiple splicing 2 [Tupaia chinensis]
Length = 240
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L S++
Sbjct: 27 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQ 63
>gi|291402858|ref|XP_002718127.1| PREDICTED: RNA binding protein with multiple splicing 2
[Oryctolagus cuniculus]
Length = 210
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L S++
Sbjct: 32 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQ 68
>gi|324509983|gb|ADY44181.1| Protein couch potato [Ascaris suum]
Length = 340
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKE--VRLVSKESRHVSMI-FLLF 179
+PP TLFV GLP D RE+ +FR + GY+ +++ SK + S + F+ F
Sbjct: 25 VPPAQVRTLFVSGLPMDAKPRELYLLFRAYSGYESSLLKITSKNGKTASPVGFVTF 80
>gi|224128458|ref|XP_002320337.1| predicted protein [Populus trichocarpa]
gi|222861110|gb|EEE98652.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
GG +S E P PP+ + LF++ LP++ + + +F+ + G+KEVR+V
Sbjct: 142 GGVKSMVPEAPAPPN--NILFIQNLPNETTPMMLQMLFQQYPGFKEVRMVE 190
>gi|31980694|ref|NP_082306.2| RNA-binding protein with multiple splicing 2 [Mus musculus]
gi|81915124|sp|Q8VC52.1|RBPS2_MOUSE RecName: Full=RNA-binding protein with multiple splicing 2
gi|18255713|gb|AAH21788.1| RNA binding protein with multiple splicing 2 [Mus musculus]
gi|74140118|dbj|BAE33785.1| unnamed protein product [Mus musculus]
gi|74194800|dbj|BAE25995.1| unnamed protein product [Mus musculus]
gi|148694156|gb|EDL26103.1| RNA binding protein with multiple splicing 2 [Mus musculus]
Length = 206
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L S++
Sbjct: 26 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQ 62
>gi|343887275|dbj|BAK61821.1| RRM-containing protein [Citrus unshiu]
Length = 231
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 91 SRPVDDPRIVGIG-GMDPG--PSAKDRALGLGG---GRSEVPLPPDASSTLFVEGLPSDC 144
S P+ DP ++G + PG P+ D G+ + PL S+ LFV+GLP+DC
Sbjct: 93 SSPLPDPNLIGQRRDIAPGINPTIPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDC 152
Query: 145 SRREVAHIF 153
+RREV+ I
Sbjct: 153 TRREVSRIL 161
>gi|324504525|gb|ADY41956.1| Protein couch potato [Ascaris suum]
Length = 340
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKE--VRLVSKESRHVSMI-FLLF 179
+PP TLFV GLP D RE+ +FR + GY+ +++ SK + S + F+ F
Sbjct: 25 VPPAQVRTLFVSGLPMDAKPRELYLLFRAYSGYESSLLKITSKNGKTASPVGFVTF 80
>gi|225437410|ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]
Length = 245
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 118 LGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
LGG +S VP P ++ LF++ LP + + + F + G+KEVR+V
Sbjct: 155 LGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFFCQYPGFKEVRMVE 204
>gi|297743906|emb|CBI36876.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 118 LGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
LGG +S VP P ++ LF++ LP + + + F + G+KEVR+V
Sbjct: 142 LGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFFCQYPGFKEVRMVE 191
>gi|149057907|gb|EDM09150.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_a [Rattus norvegicus]
gi|149057912|gb|EDM09155.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_a [Rattus norvegicus]
gi|149057917|gb|EDM09160.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 90
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 8 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 44
>gi|290651751|ref|NP_001166897.1| RNA binding protein with multiple splicing 2 [Rattus norvegicus]
gi|197246487|gb|AAI69038.1| Rbpms2 protein [Rattus norvegicus]
Length = 210
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L S++
Sbjct: 32 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQ 68
>gi|449679798|ref|XP_002163097.2| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Hydra
magnipapillata]
Length = 219
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
G ++ +P + LF+ LP + + +A +F+ F GYKEVRLV
Sbjct: 133 GHMQMQMPEIPNQILFLSELPDETTEIMLAMLFQQFDGYKEVRLV 177
>gi|123407390|ref|XP_001303000.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121884341|gb|EAX90070.1| hypothetical protein TVAG_371310 [Trichomonas vaginalis G3]
Length = 262
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
+A++TLFV GLP + + +E+ + F PF K V LV
Sbjct: 96 NANNTLFVSGLPKEVTEQEIVYEFNPFGRVKTVNLV 131
>gi|28207152|gb|AAO37216.1| hypothetical protein [Arabidopsis thaliana]
Length = 204
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE 168
D TLFV GLP D RE+ ++FR F GY+ L S +
Sbjct: 32 DEVRTLFVAGLPEDVKPREIXNLFREFPGYETSHLRSSD 70
>gi|338717427|ref|XP_001496966.3| PREDICTED: RNA-binding protein with multiple splicing 2 [Equus
caballus]
Length = 287
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L S++
Sbjct: 109 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQ 145
>gi|359806644|ref|NP_001241278.1| uncharacterized protein LOC100805822 [Glycine max]
gi|255647802|gb|ACU24361.1| unknown [Glycine max]
Length = 232
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 108 GPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
GP+A R G G E P ++ LF+E LP + + R + +F + G+KEVRL+
Sbjct: 139 GPTASFRQ---GPGAQETAAP---NNILFIENLPHETTGRMLEMLFEQYPGFKEVRLI 190
>gi|297834202|ref|XP_002884983.1| hypothetical protein ARALYDRAFT_478769 [Arabidopsis lyrata subsp.
lyrata]
gi|297330823|gb|EFH61242.1| hypothetical protein ARALYDRAFT_478769 [Arabidopsis lyrata subsp.
lyrata]
Length = 287
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
P A +TLFV GLP+D RE+ ++FR G++ +L
Sbjct: 33 PGAINTLFVSGLPNDVKAREIHNLFRRRYGFESCQL 68
>gi|410961120|ref|XP_003987133.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Felis
catus]
Length = 204
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L S++
Sbjct: 26 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQ 62
>gi|422294869|gb|EKU22169.1| U2 small nuclear ribonucleoprotein B'', partial [Nannochloropsis
gaditana CCMP526]
Length = 289
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMI 175
+ SS L + LP++C+ +A +FR F G+ E+RL + R ++ I
Sbjct: 213 EVSSMLMAQELPTECTEEMLAVLFRRFAGFHEIRLAGQ--RGIAFI 256
>gi|222634952|gb|EEE65084.1| hypothetical protein OsJ_20123 [Oryza sativa Japonica Group]
Length = 180
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/22 (68%), Positives = 19/22 (86%)
Query: 152 IFRPFVGYKEVRLVSKESRHVS 173
+FRPFVG+K++RLV KE RH S
Sbjct: 4 LFRPFVGFKDIRLVHKEPRHSS 25
>gi|431895918|gb|ELK05336.1| Ornithine decarboxylase antizyme 2, partial [Pteropus alecto]
Length = 320
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L S++
Sbjct: 5 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQ 41
>gi|12845642|dbj|BAB26834.1| unnamed protein product [Mus musculus]
Length = 168
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L S++
Sbjct: 26 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQ 62
>gi|390468449|ref|XP_002753282.2| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Callithrix jacchus]
Length = 255
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
TLFV GLP D RE+ +FRPF GY E L+ +R + F++F
Sbjct: 78 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQ-PVGFVIF 121
>gi|301115920|ref|XP_002905689.1| U1 small nuclear ribonucleoprotein A [Phytophthora infestans T30-4]
gi|262110478|gb|EEY68530.1| U1 small nuclear ribonucleoprotein A [Phytophthora infestans T30-4]
Length = 233
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
+ LF+E LP C++ + +F+ + G+KEVR+V
Sbjct: 158 NKILFLEELPESCNKEMLGVLFKQYQGFKEVRMV 191
>gi|297824185|ref|XP_002879975.1| hypothetical protein ARALYDRAFT_903572 [Arabidopsis lyrata subsp.
lyrata]
gi|297325814|gb|EFH56234.1| hypothetical protein ARALYDRAFT_903572 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE 168
D TLFV GLP D RE+ ++FR F GY+ L S +
Sbjct: 45 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSD 83
>gi|397515721|ref|XP_003828094.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Pan
paniscus]
Length = 230
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
A TLFV GLP D RE+ +FRPF GY+ ++L +++
Sbjct: 50 AVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQ 89
>gi|71026823|ref|XP_763055.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350008|gb|EAN30772.1| hypothetical protein TP03_0036 [Theileria parva]
Length = 288
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 117 GLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMI 175
G GG S+ P + LFVE LP + +V ++F G+ E +L++ S+HV+ I
Sbjct: 187 GFSGGFSDDPSITRRNRVLFVEDLPDGIAHEDVNNLFHHMPGFVETKLIN--SKHVAFI 243
>gi|47203440|emb|CAG13908.1| unnamed protein product [Tetraodon nigroviridis]
Length = 41
Score = 37.4 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKE--VRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 4 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 40
>gi|426379407|ref|XP_004056389.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Gorilla
gorilla gorilla]
Length = 214
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L +++
Sbjct: 37 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQ 73
>gi|403300512|ref|XP_003940978.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Saimiri
boliviensis boliviensis]
Length = 238
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK 160
TLFV GLP D RE+ +FRPF GY+
Sbjct: 61 TLFVSGLPVDIKPRELYLLFRPFKGYE 87
>gi|355778103|gb|EHH63139.1| RNA-binding protein with multiple splicing 2, partial [Macaca
fascicularis]
Length = 181
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L +++
Sbjct: 4 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQ 40
>gi|355692793|gb|EHH27396.1| RNA-binding protein with multiple splicing 2, partial [Macaca
mulatta]
Length = 181
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L +++
Sbjct: 4 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQ 40
>gi|2673920|gb|AAB88654.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 158
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE 168
D TLFV GLP D RE+ ++FR F GY+ L S +
Sbjct: 32 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSD 70
>gi|186507399|ref|NP_001118504.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|330255001|gb|AEC10095.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 289
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE 168
D TLFV GLP D RE+ ++FR F GY+ L S +
Sbjct: 47 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSD 85
>gi|145361708|ref|NP_850366.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|62321263|dbj|BAD94469.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|110739960|dbj|BAF01884.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330254999|gb|AEC10093.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 292
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE 168
D TLFV GLP D RE+ ++FR F GY+ L S +
Sbjct: 47 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSD 85
>gi|432092246|gb|ELK24870.1| RNA-binding protein with multiple splicing 2 [Myotis davidii]
Length = 315
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L S++
Sbjct: 27 TLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQ 63
>gi|387540910|gb|AFJ71082.1| RNA-binding protein with multiple splicing 2 [Macaca mulatta]
Length = 209
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK 160
TLFV GLP D RE+ +FRPF GY+
Sbjct: 32 TLFVSGLPVDIKPRELYLLFRPFKGYE 58
>gi|114657607|ref|XP_001174270.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Pan
troglodytes]
Length = 209
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK 160
TLFV GLP D RE+ +FRPF GY+
Sbjct: 32 TLFVSGLPVDIKPRELYLLFRPFKGYE 58
>gi|34915990|ref|NP_919248.1| RNA-binding protein with multiple splicing 2 [Homo sapiens]
gi|74762401|sp|Q6ZRY4.1|RBPS2_HUMAN RecName: Full=RNA-binding protein with multiple splicing 2
gi|34485858|gb|AAQ73311.1| RNA-binding protein with multiple splicing 2 [Homo sapiens]
gi|34534977|dbj|BAC87172.1| unnamed protein product [Homo sapiens]
gi|119598099|gb|EAW77693.1| RNA binding protein with multiple splicing 2 [Homo sapiens]
gi|225000786|gb|AAI72373.1| RNA binding protein with multiple splicing 2 [synthetic construct]
gi|261861060|dbj|BAI47052.1| RNA binding protein with multiple splicing 2 [synthetic construct]
Length = 209
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK 160
TLFV GLP D RE+ +FRPF GY+
Sbjct: 32 TLFVSGLPVDIKPRELYLLFRPFKGYE 58
>gi|307110924|gb|EFN59159.1| hypothetical protein CHLNCDRAFT_50008 [Chlorella variabilis]
Length = 236
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
+ LFVE LP + V +F+ F G+KEVR+V
Sbjct: 160 NHILFVENLPGTANEAMVGMLFQQFTGFKEVRMV 193
>gi|255587763|ref|XP_002534389.1| RNA binding protein, putative [Ricinus communis]
gi|223525395|gb|EEF27997.1| RNA binding protein, putative [Ricinus communis]
Length = 318
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 24/50 (48%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
D TLFV GLP D RE+ ++FR F GY+ L + F F
Sbjct: 72 DLVRTLFVAGLPEDVMPREIYNLFREFPGYESSHLRTPTQTSQPFAFATF 121
>gi|198423670|ref|XP_002129832.1| PREDICTED: similar to MEChanosensory abnormality family member
(mec-8) [Ciona intestinalis]
Length = 359
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK 160
TLFV GLP+D +RE+ +FR F GY+
Sbjct: 83 TLFVSGLPADAKKRELYLLFRGFTGYE 109
>gi|169611634|ref|XP_001799235.1| hypothetical protein SNOG_08932 [Phaeosphaeria nodorum SN15]
gi|160702333|gb|EAT84100.2| hypothetical protein SNOG_08932 [Phaeosphaeria nodorum SN15]
Length = 204
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
+ LF++ +P D ++ ++F F G+KEVRLVS
Sbjct: 129 NKVLFLQNIPRDIDEEDLTNVFDRFEGFKEVRLVS 163
>gi|28207150|gb|AAO37215.1| hypothetical protein [Arabidopsis thaliana]
Length = 277
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE 168
D TLFV GLP D RE+ ++FR F GY+ L S +
Sbjct: 32 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSD 70
>gi|332235691|ref|XP_003267039.1| PREDICTED: RNA-binding protein with multiple splicing 2, partial
[Nomascus leucogenys]
Length = 214
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK 160
TLFV GLP D RE+ +FRPF GY+
Sbjct: 37 TLFVSGLPVDIKPRELYLLFRPFKGYE 63
>gi|186510039|ref|NP_001118622.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|26449895|dbj|BAC42069.1| unknown protein [Arabidopsis thaliana]
gi|332641880|gb|AEE75401.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 287
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
P A +TLFV GLP+D RE+ ++FR G++ +L
Sbjct: 33 PGAINTLFVSGLPNDVKAREIHNLFRRRHGFESCQL 68
>gi|326433216|gb|EGD78786.1| hypothetical protein PTSG_01762 [Salpingoeca sp. ATCC 50818]
Length = 462
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
+ ++ LFV+ +P+ + + ++F+ F G+KEVR V
Sbjct: 385 EPNAILFVQNIPAGTTAERITNLFKQFAGFKEVRTV 420
>gi|395822321|ref|XP_003784468.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Otolemur
garnettii]
Length = 211
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK 160
TLFV GLP D RE+ +FRPF GY+
Sbjct: 34 TLFVSGLPVDIKPRELYLLFRPFKGYE 60
>gi|25148120|ref|NP_741284.1| Protein GRLD-1, isoform b [Caenorhabditis elegans]
gi|373253827|emb|CCD62181.1| Protein GRLD-1, isoform b [Caenorhabditis elegans]
Length = 423
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
+A+ TLFV +PSD RE+ H+F +EV + + + + F++F
Sbjct: 166 EATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMF 215
>gi|145331097|ref|NP_001078040.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|110737249|dbj|BAF00572.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330255000|gb|AEC10094.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 302
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE 168
D TLFV GLP D RE+ ++FR F GY+ L S +
Sbjct: 47 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSD 85
>gi|28207154|gb|AAO37217.1| hypothetical protein [Arabidopsis thaliana]
gi|61742673|gb|AAX55157.1| hypothetical protein At2g42245 [Arabidopsis thaliana]
Length = 287
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE 168
D TLFV GLP D RE+ ++FR F GY+ L S +
Sbjct: 32 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSD 70
>gi|168036913|ref|XP_001770950.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677814|gb|EDQ64280.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 212
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
TLF+ GLP D RE+ ++FR F GY+ +L
Sbjct: 17 TLFLSGLPDDIKEREIYNLFRNFEGYESCQL 47
>gi|449469074|ref|XP_004152246.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
A-like [Cucumis sativus]
Length = 248
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 83 RHMSGGMPSRPVDDPRIVGIGGMDP------GPSAKDRALGLGGGRS-EVPLPPDASSTL 135
RH G + D G+G ++P G +A + GG E P PP+ S L
Sbjct: 120 RHEEKGRKKKEQHDANQAGMG-LNPAFAGAYGATAHSQVPYSGGVMVPEAPAPPN--SIL 176
Query: 136 FVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
FV+ LP + + + +F + G+KEVR+V
Sbjct: 177 FVQNLPHETTPMMLQMLFCQYPGFKEVRMV 206
>gi|449484269|ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
Length = 242
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 83 RHMSGGMPSRPVDDPRIVGIGGMDP------GPSAKDRALGLGGGRS-EVPLPPDASSTL 135
RH G + D G+G ++P G +A + GG E P PP+ S L
Sbjct: 114 RHEEKGRKKKEQHDANQAGMG-LNPAFAGAYGATAHSQVPYSGGVMVPEAPAPPN--SIL 170
Query: 136 FVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
FV+ LP + + + +F + G+KEVR+V
Sbjct: 171 FVQNLPHETTPMMLQMLFCQYPGFKEVRMV 200
>gi|357465777|ref|XP_003603173.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355492221|gb|AES73424.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 173
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 99 IVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIF 153
++G+ P P A + +P+ S+ LFV GLP DC+RREV I
Sbjct: 99 LLGVSTGVPDPIANNERSISKSNYDALPVSAAESNILFVGGLPKDCTRREVGRIL 153
>gi|389635243|ref|XP_003715274.1| small nuclear ribonucleoprotein U1a [Magnaporthe oryzae 70-15]
gi|351647607|gb|EHA55467.1| small nuclear ribonucleoprotein U1a [Magnaporthe oryzae 70-15]
gi|440466162|gb|ELQ35444.1| small nuclear ribonucleoprotein U1a,U2b [Magnaporthe oryzae Y34]
gi|440480667|gb|ELQ61320.1| small nuclear ribonucleoprotein U1a,U2b [Magnaporthe oryzae P131]
Length = 234
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 114 RALGLGGGRSEVP---LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
+A G G VP LPP+ LFV+ LP D ++ +F F G++EVRLV
Sbjct: 139 KATGPAGAAPTVPDEYLPPN--KILFVQHLPEDFDVEKLTTVFGRFDGFREVRLV 191
>gi|356495478|ref|XP_003516604.1| PREDICTED: uncharacterized protein LOC100799471 [Glycine max]
Length = 332
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
TLFV GLP D RE+ ++FR F Y+ L S + F +F
Sbjct: 74 TLFVAGLPEDVKPREIYNLFREFPDYESSHLRSPSNSSQPFAFAVF 119
>gi|357491327|ref|XP_003615951.1| U1 small nuclear ribonucleoprotein A [Medicago truncatula]
gi|355517286|gb|AES98909.1| U1 small nuclear ribonucleoprotein A [Medicago truncatula]
gi|388501104|gb|AFK38618.1| unknown [Medicago truncatula]
Length = 233
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
G G E P ++ LF+E LP + + R + +F + G+KEVRL+
Sbjct: 148 GSGAQEAAAP---NNILFIENLPYETTGRMLEMLFEQYPGFKEVRLI 191
>gi|390333482|ref|XP_789234.3| PREDICTED: U1 small nuclear ribonucleoprotein A-like
[Strongylocentrotus purpuratus]
Length = 235
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
+P + ++ LF+ LP + + + +F+ F GYKEVRLV
Sbjct: 155 VPDEPNNILFLTNLPEETNELMLEVLFKQFNGYKEVRLV 193
>gi|15231331|ref|NP_187983.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332641879|gb|AEE75400.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 296
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
P A +TLFV GLP+D RE+ ++FR G++ +L
Sbjct: 33 PGAINTLFVSGLPNDVKAREIHNLFRRRHGFESCQL 68
>gi|395746852|ref|XP_003780695.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein with multiple
splicing 2 [Pongo abelii]
Length = 232
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK 160
TLFV GLP D RE+ +FRPF GY+
Sbjct: 73 TLFVSGLPVDIKPRELYLLFRPFKGYE 99
>gi|217069866|gb|ACJ83293.1| unknown [Medicago truncatula]
Length = 211
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
G G E P ++ LF+E LP + + R + +F + G+KEVRL+
Sbjct: 148 GSGAQEAAAP---NNILFIENLPYETTGRMLEMLFEQYPGFKEVRLI 191
>gi|25148117|ref|NP_741283.1| Protein GRLD-1, isoform a [Caenorhabditis elegans]
gi|373253826|emb|CCD62180.1| Protein GRLD-1, isoform a [Caenorhabditis elegans]
Length = 520
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
+A+ TLFV +PSD RE+ H+F +EV + + + + F++F
Sbjct: 166 EATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMF 215
>gi|71987461|ref|NP_001023161.1| Protein GRLD-1, isoform c [Caenorhabditis elegans]
gi|373253828|emb|CCD62182.1| Protein GRLD-1, isoform c [Caenorhabditis elegans]
Length = 497
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
+A+ TLFV +PSD RE+ H+F +EV + + + + F++F
Sbjct: 143 EATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMF 192
>gi|367022286|ref|XP_003660428.1| hypothetical protein MYCTH_2314150 [Myceliophthora thermophila ATCC
42464]
gi|347007695|gb|AEO55183.1| hypothetical protein MYCTH_2314150 [Myceliophthora thermophila ATCC
42464]
Length = 247
Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 109 PSAKDRALGL----GGGRSEVP---LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKE 161
P+ R GL GG + VP LPP+ LFV+ LP D + + IF F G++E
Sbjct: 143 PAKNARGAGLKSTGGGPAAVVPDEYLPPN--RILFVQNLPDDMDKDALTAIFGRFEGFRE 200
Query: 162 VRLV 165
VR V
Sbjct: 201 VRTV 204
>gi|346326538|gb|EGX96134.1| RNA binding protein [Cordyceps militaris CM01]
Length = 444
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 83 RHMSGGMP-SRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDAS--------S 133
++S G+P R P++ GG PG S G S P PP A+ +
Sbjct: 218 NNVSQGIPFGRRATAPQLPINGGAGPGNSVTHMNFNHPPG-SHHPRPPPANPADQNPPCN 276
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHVSMIFLLF 179
TL+V LPSD S E+ +F GYK RL + + M F+ F
Sbjct: 277 TLYVGNLPSDTSEEELKAMFSKQRGYK--RLCFRTKSNGPMCFVEF 320
>gi|170052648|ref|XP_001862318.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873473|gb|EDS36856.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 175
Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 126 PLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKESRHVSMI-FLLF 179
P PP TLFV GLP D RE+ +FR + GY+ +++ SK + S + F+ F
Sbjct: 4 PFPPQVR-TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTF 59
>gi|301095503|ref|XP_002896852.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108735|gb|EEY66787.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1158
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 55 RDTDSLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDR 114
R S+ R LR +++ S SGG S R + P++ D VG GG P DR
Sbjct: 947 RRKSSIAHVVTRVLRKSRLRSGSGGSSYR--ATTTPNQYSD--FTVGSGGTQPVVMTNDR 1002
Query: 115 ALGLGGGRSE-VPLPPDASSTLFVEGLPSD----CSRR--EVAHIFR 154
L R E +P+ P + ST+F LPS+ R+ EVAH+ +
Sbjct: 1003 LSALAASRLELIPVEPVSISTIF--PLPSEDVYALQRKVYEVAHLVQ 1047
>gi|126174371|ref|YP_001050520.1| alanine dehydrogenase [Shewanella baltica OS155]
gi|386341118|ref|YP_006037484.1| alanine dehydrogenase [Shewanella baltica OS117]
gi|125997576|gb|ABN61651.1| L-alanine dehydrogenase [Shewanella baltica OS155]
gi|334863519|gb|AEH13990.1| alanine dehydrogenase [Shewanella baltica OS117]
Length = 371
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 26 PRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSARHM 85
P+T+ + SG +Y T DDRG L + + + + SGG+ +
Sbjct: 102 PQTEDLIKSGAVCIAYETVTDDRGGLPLLAPMSEVAGRMSIQAGAMALEKSSGGRGM--L 159
Query: 86 SGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
GG+P V+ ++V IGG G +A A+GLG
Sbjct: 160 LGGVPG--VEPAKVVIIGGGMVGTNAAQMAVGLGA 192
>gi|217973361|ref|YP_002358112.1| alanine dehydrogenase [Shewanella baltica OS223]
gi|217498496|gb|ACK46689.1| alanine dehydrogenase [Shewanella baltica OS223]
Length = 371
Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 26 PRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSARHM 85
P+T+ + SG +Y T DDRG L + + + + SGG+ +
Sbjct: 102 PQTEDLIKSGAVCIAYETVTDDRGGLPLLAPMSEVAGRMSIQAGAMALEKSSGGRGM--L 159
Query: 86 SGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
GG+P V+ ++V IGG G +A A+GLG
Sbjct: 160 LGGVPG--VEPAKVVIIGGGMVGTNAAQMAVGLGA 192
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,150,911,935
Number of Sequences: 23463169
Number of extensions: 143544044
Number of successful extensions: 331102
Number of sequences better than 100.0: 446
Number of HSP's better than 100.0 without gapping: 293
Number of HSP's successfully gapped in prelim test: 153
Number of HSP's that attempted gapping in prelim test: 330558
Number of HSP's gapped (non-prelim): 511
length of query: 179
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 46
effective length of database: 9,238,593,890
effective search space: 424975318940
effective search space used: 424975318940
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 72 (32.3 bits)