BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030343
(179 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZPI1|SYK_ARATH Lysine--tRNA ligase OS=Arabidopsis thaliana GN=At3g11710 PE=2 SV=1
Length = 626
Score = 305 bits (781), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 156/163 (95%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
+LNVEVRQIF+TR+KI+SY+RRFLDN +FLEVETPMMNMIAGGAAARPFVTHHNDL+M+L
Sbjct: 271 ILNVEVRQIFRTRAKIISYVRRFLDNKNFLEVETPMMNMIAGGAAARPFVTHHNDLDMRL 330
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
YMRIAPELYLK+L+VGGL+RVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLME+T
Sbjct: 331 YMRIAPELYLKQLIVGGLERVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMEMT 390
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFI 163
E MLSGM+KE+TG YKIKY+A+G DKDPIEIDFTPPFR + I
Sbjct: 391 EVMLSGMVKELTGGYKIKYNANGYDKDPIEIDFTPPFRRIEMI 433
>sp|Q6F2U9|SYK_ORYSJ Lysine--tRNA ligase OS=Oryza sativa subsp. japonica GN=Os03g0586800
PE=2 SV=1
Length = 602
Score = 302 bits (774), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 140/163 (85%), Positives = 155/163 (95%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
M+N EVR IFKTRSK+VS+IR+FLD LDFLEVETPMMNMIAGGAAARPFVTHHN+LNM+L
Sbjct: 262 MVNHEVRHIFKTRSKVVSFIRKFLDGLDFLEVETPMMNMIAGGAAARPFVTHHNELNMRL 321
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMA+ADYNDL+ELT
Sbjct: 322 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAYADYNDLIELT 381
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFI 163
E MLSGM+KE+TG YKIKYHA+G++K PIEIDFTPPFR ++ I
Sbjct: 382 ETMLSGMVKELTGGYKIKYHANGVEKPPIEIDFTPPFRKIDMI 424
>sp|Q43776|SYK_SOLLC Lysine--tRNA ligase OS=Solanum lycopersicum GN=LYSRS PE=2 SV=1
Length = 588
Score = 268 bits (685), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 116/163 (71%), Positives = 149/163 (91%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
M+N EVR +F+TR++I+SYIR FLDNL+FLEVETP MN+ AGGA+ARPF+THHN+L+ +L
Sbjct: 249 MMNPEVRALFRTRARIISYIRSFLDNLEFLEVETPSMNLTAGGASARPFITHHNELDTEL 308
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
+R++PELYLK+LVVGG DRVYE+GK FRNEG+DLTH+PEFT CE YMA+ADYNDLM+LT
Sbjct: 309 LIRVSPELYLKKLVVGGFDRVYELGKHFRNEGMDLTHSPEFTMCELYMAYADYNDLMDLT 368
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFI 163
E++LSGM+K++TGSYKI+YHA+GLD +PIEIDFTPPFR ++ +
Sbjct: 369 EQLLSGMVKDLTGSYKIRYHANGLDNEPIEIDFTPPFRKIDML 411
>sp|Q99MN1|SYK_MOUSE Lysine--tRNA ligase OS=Mus musculus GN=Kars PE=1 SV=1
Length = 595
Score = 256 bits (653), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 118/163 (72%), Positives = 139/163 (85%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
+LN VRQ F RSKI++YIR FLD L FLE+ETPMMN+I GGA A+PF+T+HN+L+M L
Sbjct: 233 ILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNL 292
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
YMRIAPELY K LVVGG+DRVYEIG+QFRNEGIDLTHNPEFTTCEFYMA+ADY+DLME+T
Sbjct: 293 YMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEIT 352
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFI 163
EKMLSGM+K ITGSYKI YH G + E+DFTPPFR ++ +
Sbjct: 353 EKMLSGMVKSITGSYKITYHPDGPEGQAYEVDFTPPFRRISMV 395
>sp|P37879|SYK_CRIGR Lysine--tRNA ligase OS=Cricetulus griseus GN=KARS PE=1 SV=1
Length = 597
Score = 255 bits (652), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 118/163 (72%), Positives = 140/163 (85%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
+LN VRQ F R+KI++YIR FLD L FLE+ETPMMN+I GGA A+PF+T+HN+L+M L
Sbjct: 235 ILNDFVRQKFIVRAKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNL 294
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
YMRIAPELY K LVVGG+DRVYEIG+QFRNEGIDLTHNPEFTTCEFYMA+ADY+DLME+T
Sbjct: 295 YMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEIT 354
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFI 163
EKMLSGM+K ITGSYKI YH G + + EIDFTPPFR ++ +
Sbjct: 355 EKMLSGMVKSITGSYKITYHPDGPEGEAYEIDFTPPFRRISMV 397
>sp|Q15046|SYK_HUMAN Lysine--tRNA ligase OS=Homo sapiens GN=KARS PE=1 SV=3
Length = 597
Score = 253 bits (647), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 116/163 (71%), Positives = 139/163 (85%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
+LN VRQ F RSKI++YIR FLD L FLE+ETPMMN+I GGA A+PF+T+HN+L+M L
Sbjct: 235 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNL 294
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
YMRIAPELY K LVVGG+DRVYEIG+QFRNEGIDLTHNPEFTTCEFYMA+ADY+DLME+T
Sbjct: 295 YMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEIT 354
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFI 163
EKM+SGM+K ITGSYK+ YH G + ++DFTPPFR +N +
Sbjct: 355 EKMVSGMVKHITGSYKVTYHPDGPEGQAYDVDFTPPFRRINMV 397
>sp|Q9UUE6|SYKC_SCHPO Lysine--tRNA ligase, cytoplasmic OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=krs1 PE=3 SV=1
Length = 591
Score = 238 bits (606), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 109/163 (66%), Positives = 133/163 (81%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N R F RS+I+ YIR F D+ DF+EVETPMMNMIAGGA A+PFVTHHNDL+M L
Sbjct: 239 IMNRSTRDRFVMRSRIIQYIRHFFDSRDFMEVETPMMNMIAGGATAKPFVTHHNDLDMDL 298
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
YMRIAPELYLK LVVGGLDRVYEIG+QFRNEG DLTHNPEFT+ EFY A+ADY DLM+ T
Sbjct: 299 YMRIAPELYLKMLVVGGLDRVYEIGRQFRNEGADLTHNPEFTSIEFYQAYADYYDLMDTT 358
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFI 163
E++LSG++K++TGSYK+ YH G + E+DF+ P+R +N I
Sbjct: 359 EELLSGLVKDLTGSYKVPYHPEGPEGPKWELDFSRPWRRINMI 401
>sp|Q22099|SYK_CAEEL Lysine--tRNA ligase OS=Caenorhabditis elegans GN=krs-1 PE=2 SV=1
Length = 572
Score = 236 bits (603), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 105/162 (64%), Positives = 138/162 (85%), Gaps = 1/162 (0%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
+LN V+ F RSKI++++RR+LDNL FLEVETP+MN IAGGA A+PF+THHNDL+M L
Sbjct: 214 ILNPRVKDNFVIRSKIITFLRRYLDNLGFLEVETPIMNQIAGGATAKPFITHHNDLDMNL 273
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
++R+APELY K LVVGG+DRVYE+G+ FRNEGIDLTHNPEFTTCEFYMA+ADY D+++LT
Sbjct: 274 FLRVAPELYHKMLVVGGIDRVYEVGRLFRNEGIDLTHNPEFTTCEFYMAYADYEDVIQLT 333
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPI-EIDFTPPFRSLN 161
E +LS M+ I G+YKI+YH +G + +P+ E+DFTPPF+ ++
Sbjct: 334 EDLLSSMVMSIKGTYKIEYHPNGPNTEPVYEVDFTPPFKRVH 375
>sp|P15180|SYKC_YEAST Lysine--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=KRS1 PE=1 SV=2
Length = 591
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/164 (66%), Positives = 135/164 (82%), Gaps = 1/164 (0%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N + R F TRS+I+ YIRRFLD F+EVETPMMN+IAGGA A+PF+THHNDL+M +
Sbjct: 238 IMNKDARNRFITRSEIIRYIRRFLDQRKFIEVETPMMNVIAGGATAKPFITHHNDLDMDM 297
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
YMRIAPEL+LK+LVVGGLDRVYEIG+QFRNEGID+THNPEFTTCEFY A+AD DLM++T
Sbjct: 298 YMRIAPELFLKQLVVGGLDRVYEIGRQFRNEGIDMTHNPEFTTCEFYQAYADVYDLMDMT 357
Query: 121 EKMLSGMIKEITGSYKIKYHASGLD-KDPIEIDFTPPFRSLNFI 163
E M S M+KEITGSY IKYH D +E++F+ P++ +N I
Sbjct: 358 ELMFSEMVKEITGSYIIKYHPDPADPAKELELNFSRPWKRINMI 401
>sp|Q8SS56|SYKC_ENCCU Probable lysine--tRNA ligase, cytoplasmic OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU04_0580 PE=3 SV=1
Length = 440
Score = 222 bits (565), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 101/165 (61%), Positives = 135/165 (81%), Gaps = 2/165 (1%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N E R F+ R++I+ YIR FLD+ FLEVETPMMN+I GGAAA+PF+THHN+L + L
Sbjct: 98 LINRESRNRFQKRAQIIGYIRSFLDSRGFLEVETPMMNLIPGGAAAKPFITHHNELKLDL 157
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
YMR++PELYLK+LVVGGL+RVYEIGKQFRNEGIDLTHNPEFT+CEFYMA+ADYNDLME+T
Sbjct: 158 YMRVSPELYLKKLVVGGLERVYEIGKQFRNEGIDLTHNPEFTSCEFYMAYADYNDLMEMT 217
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDK--DPIEIDFTPPFRSLNFI 163
E+++SGM++ + G+ I Y ++ + +E+ F PFR ++ +
Sbjct: 218 EELISGMVENMFGTDTIVYSPKKREERTESVELSFKRPFRVISIL 262
>sp|C4V8R9|SYKC_NOSCE Probable lysine--tRNA ligase, cytoplasmic OS=Nosema ceranae (strain
BRL01) GN=NCER_100909 PE=3 SV=1
Length = 514
Score = 212 bits (539), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 97/159 (61%), Positives = 128/159 (80%), Gaps = 2/159 (1%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N E + F R+ I+ +IR++LD+ DF+EVETP++N+I GAAA+PF THHN+L M L
Sbjct: 169 LINKESKNRFIQRTNIIKFIRKYLDDKDFVEVETPLLNIIPTGAAAKPFTTHHNELKMNL 228
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
++RIAPELYLK+LV+GG+DRVYEIGK FRNEGIDLTHNPEFT CEFYMA+ADYND+M +
Sbjct: 229 FLRIAPELYLKKLVIGGMDRVYEIGKLFRNEGIDLTHNPEFTACEFYMAYADYNDMMNMA 288
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKD--PIEIDFTPPF 157
E+ML+GM K + GS KI Y + +K+ P+EI+F PF
Sbjct: 289 EEMLNGMCKYLHGSEKIVYAPNKREKEVKPVEINFARPF 327
>sp|A9CS74|SYKC_ENTBH Probable lysine--tRNA ligase, cytoplasmic OS=Enterocytozoon
bieneusi (strain H348) GN=EBI_25548 PE=3 SV=1
Length = 518
Score = 202 bits (515), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 94/166 (56%), Positives = 128/166 (77%), Gaps = 3/166 (1%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N + R F TRSKI+ +IR + + + FLEVETP+MN GGA+ARPF+THHN+L + L
Sbjct: 173 LVNQDSRNRFITRSKIIQHIREYFNKIGFLEVETPIMNNKVGGASARPFLTHHNELKIDL 232
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+R+APEL+LK+LVVGGL+RV+EIGK FRNEGIDLTHNPEFT EFYMA+ADYNDLM +
Sbjct: 233 YLRVAPELFLKQLVVGGLERVFEIGKNFRNEGIDLTHNPEFTAIEFYMAYADYNDLMCIV 292
Query: 121 EKMLSGMIKEITGSYKIKYHAS---GLDKDPIEIDFTPPFRSLNFI 163
E++LSG++K I GS K Y +D+ + +DF+ PF+ ++ +
Sbjct: 293 EELLSGLVKLIKGSSKFIYQPCKRETIDEIKVPLDFSTPFKRIDIL 338
>sp|A0PXN4|SYK_CLONN Lysine--tRNA ligase OS=Clostridium novyi (strain NT) GN=lysS PE=3
SV=1
Length = 510
Score = 201 bits (510), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 126/169 (74%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N +V++ F R+ I+ IR FLDN DFLEVETP+++ IAGGAAARPF+THHN L++ +
Sbjct: 178 IMNEDVKETFMKRTAIIKAIREFLDNRDFLEVETPILSPIAGGAAARPFITHHNALDIDM 237
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIA ELYLK L+VGG ++VYEIGK FRNEGID+ HNPEFT E Y A+ADYND+ME+T
Sbjct: 238 YLRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDVRHNPEFTAIELYEAYADYNDMMEIT 297
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E M++ + +++ G+ K+ Y + EIDF PP+R + + + K Y
Sbjct: 298 ENMVAYVCEKVNGTTKVMYEGT-------EIDFKPPWRRITMVDAVKEY 339
>sp|C4LCP0|SYK_TOLAT Lysine--tRNA ligase OS=Tolumonas auensis (strain DSM 9187 / TA4)
GN=lysS PE=3 SV=1
Length = 513
Score = 201 bits (510), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 94/169 (55%), Positives = 127/169 (75%), Gaps = 2/169 (1%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
+ N E R+ F+ R+++++ IR FL++ +F+EVETPMM +I GGA+ARPFVTHHN L++ +
Sbjct: 177 IANEESRRTFQIRNQVMNGIRNFLNSKNFMEVETPMMQVIPGGASARPFVTHHNALDIDM 236
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIAPELYLK LVVGG +RVYE+ + FRNEGI + HNPEFT EFYMA+ADYNDLM+LT
Sbjct: 237 YLRIAPELYLKRLVVGGFERVYEVNRNFRNEGISVRHNPEFTMLEFYMAYADYNDLMDLT 296
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E+ML + + I G+ KI+Y G ++ IEIDF PF + + S Y
Sbjct: 297 EEMLRTLAQNIHGTTKIRYAKDG--EEGIEIDFGQPFARMTMVESILKY 343
>sp|A0KNK7|SYK_AERHH Lysine--tRNA ligase OS=Aeromonas hydrophila subsp. hydrophila
(strain ATCC 7966 / NCIB 9240) GN=lysS PE=3 SV=1
Length = 511
Score = 200 bits (508), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 127/169 (75%), Gaps = 2/169 (1%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
+ N E R+ F TR+K+V+ IR+FL++ F+EVETPMM +I GGA+ARPF+THHN L++ +
Sbjct: 176 IANEESRKTFVTRTKVVAGIRKFLNDKRFMEVETPMMQVIPGGASARPFITHHNALDIDM 235
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIAPELYLK LVVGG +RVYEI + FRNEGI + HNPEFT EFYMA+ADY DLM+LT
Sbjct: 236 YLRIAPELYLKRLVVGGFERVYEINRNFRNEGISVRHNPEFTMLEFYMAYADYIDLMDLT 295
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E+ML + ++I G KI+Y G ++ + IDF PF+ L+ + S Y
Sbjct: 296 EEMLRTLAQDILGDTKIRYAKEG--EEGLTIDFGQPFQRLSMVDSILKY 342
>sp|B1KTC1|SYK_CLOBM Lysine--tRNA ligase OS=Clostridium botulinum (strain Loch Maree /
Type A3) GN=lysS PE=3 SV=1
Length = 504
Score = 199 bits (505), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 126/169 (74%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N +VR F R+ I+ +R FLDN FLEVETP+++ IAGGAAA+PF+THHN L++ +
Sbjct: 169 IINQDVRDTFIKRTAIIKSMREFLDNRGFLEVETPILSPIAGGAAAKPFITHHNALDIDM 228
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIA ELYLK L+VGG ++VYEIGK FRNEGID+ HNPEFT E Y A+ADYND+ME+T
Sbjct: 229 YLRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNPEFTAIELYEAYADYNDMMEIT 288
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E M++ + +++ G+ K++Y + EIDFTPP+R L + + K Y
Sbjct: 289 ENMIAYICEKVLGTTKVEYEGA-------EIDFTPPWRRLTMVDAVKEY 330
>sp|A7GJB3|SYK_CLOBL Lysine--tRNA ligase OS=Clostridium botulinum (strain Langeland /
NCTC 10281 / Type F) GN=lysS PE=3 SV=1
Length = 504
Score = 199 bits (505), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 126/169 (74%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N +VR F R+ I+ +R FLDN FLEVETP+++ IAGGAAA+PF+THHN L++ +
Sbjct: 169 IINQDVRDTFIKRTAIIKSMREFLDNRGFLEVETPILSPIAGGAAAKPFITHHNALDIDM 228
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIA ELYLK L+VGG ++VYEIGK FRNEGID+ HNPEFT E Y A+ADYND+ME+T
Sbjct: 229 YLRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNPEFTAIELYEAYADYNDMMEIT 288
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E M++ + +++ G+ K++Y + EIDFTPP+R L + + K Y
Sbjct: 289 ENMIAYICEKVLGTTKVEYEGA-------EIDFTPPWRRLTMVDAVKEY 330
>sp|B1IGJ2|SYK_CLOBK Lysine--tRNA ligase OS=Clostridium botulinum (strain Okra / Type
B1) GN=lysS PE=3 SV=1
Length = 504
Score = 199 bits (505), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 126/169 (74%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N +VR F R+ I+ +R FLDN FLEVETP+++ IAGGAAA+PF+THHN L++ +
Sbjct: 169 IINQDVRDTFIKRTAIIKSMREFLDNRGFLEVETPILSPIAGGAAAKPFITHHNALDIDM 228
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIA ELYLK L+VGG ++VYEIGK FRNEGID+ HNPEFT E Y A+ADYND+ME+T
Sbjct: 229 YLRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNPEFTAIELYEAYADYNDMMEIT 288
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E M++ + +++ G+ K++Y + EIDFTPP+R L + + K Y
Sbjct: 289 ENMIAYICEKVLGTTKVEYEGA-------EIDFTPPWRRLTMVDAVKEY 330
>sp|Q899G7|SYK_CLOTE Lysine--tRNA ligase OS=Clostridium tetani (strain Massachusetts /
E88) GN=lysS PE=3 SV=1
Length = 502
Score = 197 bits (500), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 126/169 (74%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N +VR F R+KI+ Y+R FLD D++EVETP+++ IAGGAAARPF THHN L++ +
Sbjct: 169 IVNEDVRDTFMKRTKIIKYMREFLDAKDYIEVETPVLSPIAGGAAARPFTTHHNALDIDM 228
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIA ELYLK L+VGG ++VYEIGK FRNEGID+ HNPEFT E Y A+ADYND+ME+T
Sbjct: 229 YLRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNPEFTMIELYEAYADYNDMMEIT 288
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E M++ + +++ G+ K+KY + EI+F PP++ + + S K Y
Sbjct: 289 ENMVAYIAEKVCGNTKVKYEET-------EIEFRPPWKRITMVDSVKEY 330
>sp|A5I7P4|SYK_CLOBH Lysine--tRNA ligase OS=Clostridium botulinum (strain Hall / ATCC
3502 / NCTC 13319 / Type A) GN=lysS PE=3 SV=1
Length = 504
Score = 196 bits (498), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 126/169 (74%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N +VR F R+ I+ +R +LDN FLEVETP+++ IAGGAAA+PF+THHN LN+ +
Sbjct: 169 IINQDVRDTFMKRTAIIKTMREYLDNKGFLEVETPILSPIAGGAAAKPFITHHNALNIDM 228
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIA ELYLK L+VGG ++VYEIG+ FRNEG+D+ HNPEFT E Y A+ADYND+ME+T
Sbjct: 229 YLRIATELYLKRLIVGGFEKVYEIGRNFRNEGMDIRHNPEFTVIELYEAYADYNDMMEIT 288
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E M++ + +++ G+ K++Y + EIDFTPP+R L + + + Y
Sbjct: 289 ENMIAYICEKVLGTTKVQYEGT-------EIDFTPPWRRLTMVDAVREY 330
>sp|A7FZA5|SYK_CLOB1 Lysine--tRNA ligase OS=Clostridium botulinum (strain ATCC 19397 /
Type A) GN=lysS PE=3 SV=1
Length = 504
Score = 196 bits (498), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 126/169 (74%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N +VR F R+ I+ +R +LDN FLEVETP+++ IAGGAAA+PF+THHN LN+ +
Sbjct: 169 IINQDVRDTFMKRTAIIKTMREYLDNKGFLEVETPILSPIAGGAAAKPFITHHNALNIDM 228
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIA ELYLK L+VGG ++VYEIG+ FRNEG+D+ HNPEFT E Y A+ADYND+ME+T
Sbjct: 229 YLRIATELYLKRLIVGGFEKVYEIGRNFRNEGMDIRHNPEFTVIELYEAYADYNDMMEIT 288
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E M++ + +++ G+ K++Y + EIDFTPP+R L + + + Y
Sbjct: 289 ENMIAYICEKVLGTTKVQYEGT-------EIDFTPPWRRLTMVDAVREY 330
>sp|A5EY50|SYK_DICNV Lysine--tRNA ligase OS=Dichelobacter nodosus (strain VCS1703A)
GN=lysS PE=3 SV=1
Length = 498
Score = 196 bits (498), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 94/160 (58%), Positives = 117/160 (73%), Gaps = 8/160 (5%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
M+N + R +FK RSKI+SYIR F + DFLEVETPMM+ I GGAAA+PF+THHN L+M L
Sbjct: 170 MVNAQSRDVFKARSKIISYIRHFFEARDFLEVETPMMHPIPGGAAAKPFITHHNALDMPL 229
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIAPELYLK LVVGG +RV+EI + FRNEG+ HNPEFT EFY A+ADYNDLM+L+
Sbjct: 230 YLRIAPELYLKRLVVGGFERVFEINRNFRNEGVSARHNPEFTMLEFYQAYADYNDLMDLS 289
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSL 160
E + G+ + I G+ K Y + EIDF+ FR L
Sbjct: 290 EVLFQGLAQTILGTTKFDYQGT-------EIDFS-QFRRL 321
>sp|A4SJK0|SYK_AERS4 Lysine--tRNA ligase OS=Aeromonas salmonicida (strain A449) GN=lysS
PE=3 SV=1
Length = 512
Score = 194 bits (493), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/166 (55%), Positives = 123/166 (74%), Gaps = 2/166 (1%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
+ N E R+ F R+K+V+ IR+F ++ F+EVETPMM +I GGA+ARPFVTHHN L++ +
Sbjct: 176 IANEESRKTFMIRTKVVAGIRKFFNDKRFMEVETPMMQVIPGGASARPFVTHHNALDIDM 235
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIAPELYLK LVVGG +RVYEI + FRNEGI + HNPEFT EFYMA+ADY DLM+LT
Sbjct: 236 YLRIAPELYLKRLVVGGFERVYEINRNFRNEGISVRHNPEFTMIEFYMAYADYIDLMDLT 295
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSC 166
E++L + ++I G KI+Y G ++ + IDF PF+ L + S
Sbjct: 296 EELLRTLAQDILGDTKIRYAKEG--EEGLTIDFGQPFQRLTMVDSI 339
>sp|A5D5Q4|SYK_PELTS Lysine--tRNA ligase OS=Pelotomaculum thermopropionicum (strain DSM
13744 / JCM 10971 / SI) GN=lysS PE=3 SV=1
Length = 506
Score = 194 bits (493), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/167 (54%), Positives = 119/167 (71%), Gaps = 7/167 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N EV+++F+TRSKI+ R FLD FLEVETPMM +I GGAAARPF+THHN L+M L
Sbjct: 175 IVNPEVKEVFETRSKIIRACRNFLDGKGFLEVETPMMQVIPGGAAARPFITHHNALDMDL 234
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIAPELYLK L+VGG ++VYEI + FRNEGI HNPEFT E Y A+ADY D+M LT
Sbjct: 235 YLRIAPELYLKRLLVGGFEKVYEINRNFRNEGISTKHNPEFTMLELYQAYADYTDMMNLT 294
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCK 167
E+++S + E G+ KI+Y + EID PP+ + + + K
Sbjct: 295 EELISAVAVEALGTTKIEYQGT-------EIDLAPPWPRIPMLETIK 334
>sp|Q050Q1|SYK_LEPBL Lysine--tRNA ligase OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain L550) GN=lysS PE=3 SV=1
Length = 495
Score = 192 bits (487), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 124/169 (73%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N VR F TRS+IVS IR FL N FLEVETPMM IAGGAAARPFVTHHN L+M+L
Sbjct: 167 VVNDHVRDTFITRSRIVSEIRNFLTNEGFLEVETPMMQPIAGGAAARPFVTHHNTLDMQL 226
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
++RIAPELYLK L+VGG+DRV+E+ + FRNEGI HNPEFT E Y+AFAD N +++LT
Sbjct: 227 FLRIAPELYLKRLIVGGMDRVFELNRNFRNEGISTKHNPEFTMMEAYIAFADMNTMLDLT 286
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E++++ + ++I G+ KI+Y G D ID +PP+R + + K Y
Sbjct: 287 ERLITHLAQKIHGALKIQY---GKDL----IDLSPPWRKITYTDIIKEY 328
>sp|Q04SM4|SYK_LEPBJ Lysine--tRNA ligase OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain JB197) GN=lysS PE=3 SV=1
Length = 495
Score = 192 bits (487), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 124/169 (73%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N VR F TRS+IVS IR FL N FLEVETPMM IAGGAAARPFVTHHN L+M+L
Sbjct: 167 VVNDHVRDTFITRSRIVSEIRNFLTNEGFLEVETPMMQPIAGGAAARPFVTHHNTLDMQL 226
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
++RIAPELYLK L+VGG+DRV+E+ + FRNEGI HNPEFT E Y+AFAD N +++LT
Sbjct: 227 FLRIAPELYLKRLIVGGMDRVFELNRNFRNEGISTKHNPEFTMMEAYIAFADMNTMLDLT 286
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E++++ + ++I G+ KI+Y G D ID +PP+R + + K Y
Sbjct: 287 ERLITHLAQKIHGALKIQY---GKDL----IDLSPPWRKITYTDIIKEY 328
>sp|Q0SQ86|SYK_CLOPS Lysine--tRNA ligase OS=Clostridium perfringens (strain SM101 / Type
A) GN=lysS PE=3 SV=1
Length = 501
Score = 192 bits (487), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 122/169 (72%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
+ N EV+ F RS+IV IR FLDN FLEV+TP+++ IAGGAAARPF+THHN L++ +
Sbjct: 169 ITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAGGAAARPFITHHNALDIDM 228
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIA ELYLK L+V G ++VYE+GK FRNEG+ + HNPEFT E Y A+ADYND+ME+
Sbjct: 229 YLRIATELYLKRLIVAGFEKVYEMGKNFRNEGVSVRHNPEFTAIELYEAYADYNDMMEIM 288
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E M++ + +++ GS K+ Y + EIDFTPP+R + + + K +
Sbjct: 289 ENMIAYVCEKVNGSTKVTYEGT-------EIDFTPPWRRITMVDAVKEF 330
>sp|Q8XHL8|SYK_CLOPE Lysine--tRNA ligase OS=Clostridium perfringens (strain 13 / Type A)
GN=lysS PE=3 SV=1
Length = 501
Score = 192 bits (487), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 122/169 (72%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
+ N EV+ F RS+IV IR FLDN FLEV+TP+++ IAGGAAARPF+THHN L++ +
Sbjct: 169 ITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAGGAAARPFITHHNALDIDM 228
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIA ELYLK L+V G ++VYE+GK FRNEG+ + HNPEFT E Y A+ADYND+ME+
Sbjct: 229 YLRIATELYLKRLIVAGFEKVYEMGKNFRNEGVSVRHNPEFTAIELYEAYADYNDMMEIM 288
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E M++ + +++ GS K+ Y + EIDFTPP+R + + + K +
Sbjct: 289 ENMIAYVCEKVNGSTKVTYEGT-------EIDFTPPWRRITMVDAVKEF 330
>sp|Q0TMI7|SYK_CLOP1 Lysine--tRNA ligase OS=Clostridium perfringens (strain ATCC 13124 /
NCTC 8237 / Type A) GN=lysS PE=3 SV=1
Length = 501
Score = 192 bits (487), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 122/169 (72%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
+ N EV+ F RS+IV IR FLDN FLEV+TP+++ IAGGAAARPF+THHN L++ +
Sbjct: 169 ITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAGGAAARPFITHHNALDIDM 228
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIA ELYLK L+V G ++VYE+GK FRNEG+ + HNPEFT E Y A+ADYND+ME+
Sbjct: 229 YLRIATELYLKRLIVAGFEKVYEMGKNFRNEGVSVRHNPEFTAIELYEAYADYNDMMEIM 288
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E M++ + +++ GS K+ Y + EIDFTPP+R + + + K +
Sbjct: 289 ENMIAYVCEKVNGSTKVTYEGT-------EIDFTPPWRRITMVDAVKEF 330
>sp|A5N4L1|SYK_CLOK5 Lysine--tRNA ligase OS=Clostridium kluyveri (strain ATCC 8527 / DSM
555 / NCIMB 10680) GN=lysS PE=3 SV=1
Length = 502
Score = 191 bits (486), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 123/169 (72%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N +VR F R+ ++ IR FLD D++EVETP+++ IAGGAAA+PF+THHN L++ +
Sbjct: 169 IINQDVRDTFLKRTAVIRAIREFLDGRDYIEVETPILSSIAGGAAAKPFITHHNALDIDM 228
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIA ELYLK L+VGG ++VYEIGK FRNEGID+ HNPEFT E Y AF+DYND+MELT
Sbjct: 229 YLRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDVRHNPEFTAMELYEAFSDYNDMMELT 288
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E ML+ + +++ G+ K+ Y + EIDF PP+ + + + K +
Sbjct: 289 ENMLAYVCEKVLGTTKVIYQDT-------EIDFKPPWNRITMVDAVKQF 330
>sp|A9BD62|SYK_PROM4 Lysine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9211)
GN=lysS PE=3 SV=1
Length = 503
Score = 191 bits (486), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 118/161 (73%), Gaps = 7/161 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N + R+ F++R+ +VS IRR+LD DFLE+ETP++ AGGA ARPF+THHN L++ L
Sbjct: 169 IVNPQSRKTFRSRALMVSAIRRWLDERDFLEIETPVLQSEAGGAEARPFITHHNTLDLSL 228
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIA EL+LK LVVGG +RVYE+G+ FRNEGI HNPEFTT E Y AFADY D+M+LT
Sbjct: 229 YLRIATELHLKRLVVGGFERVYELGRIFRNEGISTRHNPEFTTVEIYQAFADYTDMMDLT 288
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLN 161
E+M+S + +I GS I+Y E+D TPP+R +
Sbjct: 289 EEMISFVCSQICGSTTIQYQGK-------EVDLTPPWRRIT 322
>sp|Q97EB7|SYK_CLOAB Lysine--tRNA ligase OS=Clostridium acetobutylicum (strain ATCC 824
/ DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=lysS
PE=3 SV=1
Length = 515
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 122/169 (72%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N +VR+ F R+ I+ +R FLDN D+LEVETP+++ IA GA+ARPF THHN L++ +
Sbjct: 180 IINQDVRETFMKRTAIIKAVREFLDNKDYLEVETPVLSTIASGASARPFSTHHNALDLDM 239
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
++RIA ELYLK L+VGG ++VYEIGK FRNEGID+ HNPEFT E Y A+ADYND+ME+T
Sbjct: 240 HLRIATELYLKRLIVGGFEKVYEIGKDFRNEGIDVRHNPEFTMIELYEAYADYNDMMEIT 299
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E M++ +++ G+ KI Y + EID TPP+R + + K +
Sbjct: 300 ENMVAYACQKVNGTTKITYEGT-------EIDLTPPWRRVTMVDIVKEH 341
>sp|Q5QYV9|SYK_IDILO Lysine--tRNA ligase OS=Idiomarina loihiensis (strain ATCC BAA-735 /
DSM 15497 / L2-TR) GN=lysS PE=3 SV=1
Length = 503
Score = 189 bits (480), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/169 (54%), Positives = 117/169 (69%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
+ N E R F RSKI+ YIRRFL + FLEVETPMM I GGAAARPF THHN L+M+L
Sbjct: 172 ITNEESRSTFMARSKIIDYIRRFLSDRQFLEVETPMMQAIPGGAAARPFSTHHNALDMEL 231
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
++RIAPELYLK LVVGG ++V+EI + FRNEG+ HNPEFT EFY A+ADY+DLM+LT
Sbjct: 232 FLRIAPELYLKRLVVGGFEKVFEINRNFRNEGLSTRHNPEFTMLEFYWAYADYHDLMDLT 291
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E+ML G + + GS ++ + G+D DF PF + + + Y
Sbjct: 292 EQMLRGAAESVLGS--AQFTSQGVD-----YDFGKPFERMTVLEAIVKY 333
>sp|Q8R7N1|SYK_THETN Lysine--tRNA ligase OS=Thermoanaerobacter tengcongensis (strain DSM
15242 / JCM 11007 / NBRC 100824 / MB4) GN=lysS PE=3 SV=1
Length = 499
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 124/169 (73%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N VR++F R+KI+ IR FLDN FLEVETP+++ IAGGAAARPF+THHN L++ +
Sbjct: 169 IINPSVREVFLKRTKIIKAIREFLDNRGFLEVETPVLHTIAGGAAARPFITHHNALDIDM 228
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIA EL+LK L+VGG ++VYEIG+ FRNEG+D+ HNPEFT E Y A+ DY+ +MELT
Sbjct: 229 YLRIALELHLKRLIVGGFEKVYEIGRVFRNEGMDIRHNPEFTLLELYEAYTDYHGMMELT 288
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E++ + + +++ GS KI Y + EID TPP++ + + + K Y
Sbjct: 289 EQLFAYVAEKVNGSTKIIYQGT-------EIDLTPPWKRITMVDAIKEY 330
>sp|Q8F4P5|SYK_LEPIN Lysine--tRNA ligase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar Lai (strain 56601) GN=lysS
PE=3 SV=1
Length = 495
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 122/169 (72%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N VR F TRSKIVS IR FL FLEVETPMM IAGGAAARPFVTHHN L+M+L
Sbjct: 167 IVNDHVRDTFITRSKIVSEIRSFLTQEGFLEVETPMMQPIAGGAAARPFVTHHNTLDMQL 226
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
++RIAPELYLK L+VGG+DRV+E+ + FRNEGI HNPEFT E YMAF D + +++LT
Sbjct: 227 FLRIAPELYLKRLIVGGMDRVFELNRNFRNEGISTKHNPEFTMMEAYMAFGDMSTMLDLT 286
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E++++ + ++I G+ KI+Y G D ID +PP++ ++ K Y
Sbjct: 287 ERLITHLAQKICGTLKIQY---GKDL----IDLSPPWKRTTYVDIIKEY 328
>sp|Q72R38|SYK_LEPIC Lysine--tRNA ligase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar copenhageni (strain Fiocruz
L1-130) GN=lysS PE=3 SV=1
Length = 495
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 122/169 (72%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N VR F TRSKIVS IR FL FLEVETPMM IAGGAAARPFVTHHN L+M+L
Sbjct: 167 IVNDHVRDTFITRSKIVSEIRSFLTQEGFLEVETPMMQPIAGGAAARPFVTHHNTLDMQL 226
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
++RIAPELYLK L+VGG+DRV+E+ + FRNEGI HNPEFT E YMAF D + +++LT
Sbjct: 227 FLRIAPELYLKRLIVGGMDRVFELNRNFRNEGISTKHNPEFTMMEAYMAFGDMSTMLDLT 286
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E++++ + ++I G+ KI+Y G D ID +PP++ ++ K Y
Sbjct: 287 ERLITHLAQKICGTLKIQY---GKDL----IDLSPPWKRTTYVDIIKEY 328
>sp|B0K5C0|SYK_THEPX Lysine--tRNA ligase OS=Thermoanaerobacter sp. (strain X514) GN=lysS
PE=3 SV=1
Length = 499
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 125/169 (73%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N EV+++F R+KI+ IR FLDN FLEVETP+++ IAGGAAARPF+THHN L++ +
Sbjct: 169 IINPEVKEVFLKRTKIIKAIREFLDNRGFLEVETPILHTIAGGAAARPFITHHNALDIDM 228
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIA EL+LK L+VGGL++VYE+G+ FRNEG+D+ HNPEFT E Y A+ DY +MELT
Sbjct: 229 YLRIALELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNPEFTLLELYEAYTDYYGMMELT 288
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E++ + + +++ G+ KI Y + EID TPP++ + + + K Y
Sbjct: 289 EQLFAYVAQKVNGTTKIVYQGT-------EIDLTPPWKRITMVDAIKEY 330
>sp|A1S9M3|SYK_SHEAM Lysine--tRNA ligase OS=Shewanella amazonensis (strain ATCC BAA-1098
/ SB2B) GN=lysS PE=3 SV=1
Length = 500
Score = 187 bits (476), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 123/169 (72%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N + R+ FK RSK+V+ IR F+ +F+EVETPMM++I GGA+ARPFVTHHN L++++
Sbjct: 164 IVNEDSREAFKMRSKVVAAIRNFMIKKEFMEVETPMMHVIPGGASARPFVTHHNALDIEM 223
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIAPELYLK LVVGG +RV+EI + FRNEG+ HNPEFT EFYMA+ADY DL++LT
Sbjct: 224 YLRIAPELYLKRLVVGGFERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLIDLT 283
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E+MLS + KE+ G K+ Y IDF P+ ++ + + K Y
Sbjct: 284 EEMLSSIAKELLGDTKLPYGEH-------VIDFGGPYTRMSMLEAIKHY 325
>sp|Q0T106|SYK_SHIF8 Lysine--tRNA ligase OS=Shigella flexneri serotype 5b (strain 8401)
GN=lysS PE=3 SV=1
Length = 505
Score = 186 bits (473), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 116/168 (69%), Gaps = 7/168 (4%)
Query: 3 NVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKLYM 62
N E R FK RS+I+S IR+F+ N F+EVETPMM +I GGAAARPF+THHN L++ +Y+
Sbjct: 177 NDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYL 236
Query: 63 RIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEK 122
RIAPELYLK LVVGG +RV+EI + FRNEGI + HNPEFT E YMA+ADY DL+ELTE
Sbjct: 237 RIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTES 296
Query: 123 MLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWYK 170
+ + ++I G ++ Y + +DF PF L + K Y+
Sbjct: 297 LFRTLAQDILGKTEVTY-------GDVTLDFGKPFEKLTMREAIKKYR 337
>sp|B2U0Q7|SYK_SHIB3 Lysine--tRNA ligase OS=Shigella boydii serotype 18 (strain CDC
3083-94 / BS512) GN=lysS PE=3 SV=1
Length = 505
Score = 186 bits (473), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 116/168 (69%), Gaps = 7/168 (4%)
Query: 3 NVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKLYM 62
N E R FK RS+I+S IR+F+ N F+EVETPMM +I GGAAARPF+THHN L++ +Y+
Sbjct: 177 NDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYL 236
Query: 63 RIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEK 122
RIAPELYLK LVVGG +RV+EI + FRNEGI + HNPEFT E YMA+ADY DL+ELTE
Sbjct: 237 RIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTES 296
Query: 123 MLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWYK 170
+ + ++I G ++ Y + +DF PF L + K Y+
Sbjct: 297 LFRTLAQDILGKTEVTY-------GDVTLDFGKPFEKLTMREAIKKYR 337
>sp|Q83JU6|SYK1_SHIFL Lysine--tRNA ligase OS=Shigella flexneri GN=lysS PE=3 SV=3
Length = 505
Score = 186 bits (473), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 116/168 (69%), Gaps = 7/168 (4%)
Query: 3 NVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKLYM 62
N E R FK RS+I+S IR+F+ N F+EVETPMM +I GGAAARPF+THHN L++ +Y+
Sbjct: 177 NDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYL 236
Query: 63 RIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEK 122
RIAPELYLK LVVGG +RV+EI + FRNEGI + HNPEFT E YMA+ADY DL+ELTE
Sbjct: 237 RIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTES 296
Query: 123 MLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWYK 170
+ + ++I G ++ Y + +DF PF L + K Y+
Sbjct: 297 LFRTLAQDILGKTEVTY-------GDVTLDFGKPFEKLTMREAIKKYR 337
>sp|P0A8N3|SYK1_ECOLI Lysine--tRNA ligase OS=Escherichia coli (strain K12) GN=lysS PE=1
SV=2
Length = 505
Score = 186 bits (473), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 116/168 (69%), Gaps = 7/168 (4%)
Query: 3 NVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKLYM 62
N E R FK RS+I+S IR+F+ N F+EVETPMM +I GGAAARPF+THHN L++ +Y+
Sbjct: 177 NDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYL 236
Query: 63 RIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEK 122
RIAPELYLK LVVGG +RV+EI + FRNEGI + HNPEFT E YMA+ADY DL+ELTE
Sbjct: 237 RIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTES 296
Query: 123 MLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWYK 170
+ + ++I G ++ Y + +DF PF L + K Y+
Sbjct: 297 LFRTLAQDILGKTEVTY-------GDVTLDFGKPFEKLTMREAIKKYR 337
>sp|P0A8N4|SYK1_ECOL6 Lysine--tRNA ligase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC
700928 / UPEC) GN=lysS PE=3 SV=2
Length = 505
Score = 186 bits (473), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 116/168 (69%), Gaps = 7/168 (4%)
Query: 3 NVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKLYM 62
N E R FK RS+I+S IR+F+ N F+EVETPMM +I GGAAARPF+THHN L++ +Y+
Sbjct: 177 NDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYL 236
Query: 63 RIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEK 122
RIAPELYLK LVVGG +RV+EI + FRNEGI + HNPEFT E YMA+ADY DL+ELTE
Sbjct: 237 RIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTES 296
Query: 123 MLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWYK 170
+ + ++I G ++ Y + +DF PF L + K Y+
Sbjct: 297 LFRTLAQDILGKTEVTY-------GDVTLDFGKPFEKLTMREAIKKYR 337
>sp|B0KCE4|SYK_THEP3 Lysine--tRNA ligase OS=Thermoanaerobacter pseudethanolicus (strain
ATCC 33223 / 39E) GN=lysS PE=3 SV=1
Length = 499
Score = 186 bits (472), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 124/169 (73%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N EV+++F R+KI+ IR FLDN FLEVETP+++ IAGGAAARPF+THHN L++ +
Sbjct: 169 IINPEVKEVFLKRTKIIKAIREFLDNRGFLEVETPILHTIAGGAAARPFITHHNALDIDM 228
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIA EL+LK L+VGGL++VYE+G+ FRNEG+D+ HNPEFT E Y A+ DY +MELT
Sbjct: 229 YLRIALELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNPEFTLLELYEAYTDYYGMMELT 288
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E++ + + +++ G KI Y + EID TPP++ + + + K Y
Sbjct: 289 EQLFAYVAQKVNGITKIVYQGT-------EIDLTPPWKRITMVDAIKEY 330
>sp|Q31WF2|SYK_SHIBS Lysine--tRNA ligase OS=Shigella boydii serotype 4 (strain Sb227)
GN=lysS PE=3 SV=1
Length = 505
Score = 186 bits (472), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 116/168 (69%), Gaps = 7/168 (4%)
Query: 3 NVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKLYM 62
N E R FK RS+I+S IR+F+ N F+EVETPMM +I GGAAARPF+THHN L++ +Y+
Sbjct: 177 NDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYL 236
Query: 63 RIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEK 122
RIAPELYLK LVVGG +RV+EI + FRNEGI + HNPEFT E YMA+ADY DL+ELTE
Sbjct: 237 RIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTES 296
Query: 123 MLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWYK 170
+ + ++I G ++ Y + +DF PF L + K Y+
Sbjct: 297 LFRTLAQDILGKTEVTY-------GDVTLDFGKPFEKLTMREAIKKYR 337
>sp|Q8XD57|SYK1_ECO57 Lysine--tRNA ligase OS=Escherichia coli O157:H7 GN=lysS PE=3 SV=3
Length = 505
Score = 186 bits (472), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 116/168 (69%), Gaps = 7/168 (4%)
Query: 3 NVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKLYM 62
N E R FK RS+I+S IR+F+ N F+EVETPMM +I GGAAARPF+THHN L++ +Y+
Sbjct: 177 NDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYL 236
Query: 63 RIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEK 122
RIAPELYLK LVVGG +RV+EI + FRNEGI + HNPEFT E YMA+ADY DL+ELTE
Sbjct: 237 RIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTES 296
Query: 123 MLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWYK 170
+ + ++I G ++ Y + +DF PF L + K Y+
Sbjct: 297 LFRTLAQDILGKTEVTY-------GDVTLDFGKPFEKLTMREAIKKYR 337
>sp|Q8EI58|SYK_SHEON Lysine--tRNA ligase OS=Shewanella oneidensis (strain MR-1) GN=lysS
PE=3 SV=1
Length = 500
Score = 186 bits (471), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 121/169 (71%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N E RQ F RSK+V+ IR F+ +F+EVETPMM++I GGA+ARPF+THHN L+M +
Sbjct: 164 IVNEESRQAFVMRSKVVAAIRNFMIKKEFMEVETPMMHVIPGGASARPFITHHNALDMPM 223
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIAPELYLK LVVGG +RV+EI + FRNEG+ HNPEFT EFYMA+ADY DLM+LT
Sbjct: 224 YLRIAPELYLKRLVVGGFERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYQDLMDLT 283
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E++LS + E+ GS ++ Y +DF P+ L+ + + + Y
Sbjct: 284 EELLSSIAIELLGSAQMPYGEH-------TVDFGGPYARLSMLEAIQKY 325
>sp|A3QB36|SYK_SHELP Lysine--tRNA ligase OS=Shewanella loihica (strain ATCC BAA-1088 /
PV-4) GN=lysS PE=3 SV=1
Length = 500
Score = 186 bits (471), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 121/169 (71%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N E R F RSK+V+ IR F+ + +F+EVETPMM+ I GGA+ARPF+THHN L++++
Sbjct: 164 IVNEESRAAFIMRSKVVTAIRNFMVSKEFMEVETPMMHSIPGGASARPFITHHNALDIEM 223
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIAPELYLK LVVGG +RV+EI + FRNEG+ HNPEFT EFYMA+ADY DLM+LT
Sbjct: 224 YLRIAPELYLKRLVVGGFERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLT 283
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E+MLS + K++ G K+ Y IDF P+ L+ + + K Y
Sbjct: 284 EEMLSSIAKDLLGDTKLPYGEH-------TIDFGGPYERLSMLDAIKKY 325
>sp|A1RGF1|SYK_SHESW Lysine--tRNA ligase OS=Shewanella sp. (strain W3-18-1) GN=lysS PE=3
SV=1
Length = 500
Score = 186 bits (471), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 121/169 (71%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N E RQ F RSK+V+ IR F+ +F+EVETPMM++I GGA+ARPF+THHN L+M +
Sbjct: 164 IVNEESRQAFVMRSKVVAAIRNFMIKKEFMEVETPMMHVIPGGASARPFITHHNALDMPM 223
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIAPELYLK LVVGG +RV+EI + FRNEG+ HNPEFT EFYMA+ADY DLM+LT
Sbjct: 224 YLRIAPELYLKRLVVGGFERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLT 283
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E++LS + E+ GS ++ Y +DF P+ L+ + + + Y
Sbjct: 284 EELLSSIAIELLGSAQMPYGEH-------TVDFGGPYARLSMLEAIQKY 325
>sp|A4Y9X9|SYK_SHEPC Lysine--tRNA ligase OS=Shewanella putrefaciens (strain CN-32 / ATCC
BAA-453) GN=lysS PE=3 SV=1
Length = 500
Score = 186 bits (471), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 121/169 (71%), Gaps = 7/169 (4%)
Query: 1 MLNVEVRQIFKTRSKIVSYIRRFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKL 60
++N E RQ F RSK+V+ IR F+ +F+EVETPMM++I GGA+ARPF+THHN L+M +
Sbjct: 164 IVNEESRQAFVMRSKVVAAIRNFMIKKEFMEVETPMMHVIPGGASARPFITHHNALDMPM 223
Query: 61 YMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELT 120
Y+RIAPELYLK LVVGG +RV+EI + FRNEG+ HNPEFT EFYMA+ADY DLM+LT
Sbjct: 224 YLRIAPELYLKRLVVGGFERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLT 283
Query: 121 EKMLSGMIKEITGSYKIKYHASGLDKDPIEIDFTPPFRSLNFIYSCKWY 169
E++LS + E+ GS ++ Y +DF P+ L+ + + + Y
Sbjct: 284 EELLSSIAIELLGSAQMPYGEH-------TVDFGGPYARLSMLEAIQKY 325
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.141 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,019,906
Number of Sequences: 539616
Number of extensions: 2770216
Number of successful extensions: 11036
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1217
Number of HSP's successfully gapped in prelim test: 230
Number of HSP's that attempted gapping in prelim test: 8887
Number of HSP's gapped (non-prelim): 1480
length of query: 179
length of database: 191,569,459
effective HSP length: 110
effective length of query: 69
effective length of database: 132,211,699
effective search space: 9122607231
effective search space used: 9122607231
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)