Query 030344
Match_columns 179
No_of_seqs 20 out of 22
Neff 2.2
Searched_HMMs 13730
Date Mon Mar 25 19:58:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030344.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030344hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2axtm1 f.23.35.1 (M:1-36) Pho 60.7 2.4 0.00018 25.7 2.2 29 144-173 2-30 (36)
2 d2j0td1 b.40.3.1 (D:1-124) TIM 34.7 7.7 0.00056 26.2 1.6 15 121-135 104-118 (124)
3 d1rz3a_ c.37.1.6 (A:) Hypothet 33.5 7.9 0.00058 25.2 1.5 26 81-106 25-50 (198)
4 d1rkba_ c.37.1.1 (A:) Adenylat 26.7 13 0.00095 23.5 1.6 19 87-105 13-31 (173)
5 d1x6va3 c.37.1.4 (A:34-228) Ad 26.4 14 0.001 24.0 1.7 26 88-113 29-54 (195)
6 d1zina1 c.37.1.1 (A:1-125,A:16 25.2 14 0.001 24.1 1.6 18 87-104 9-26 (182)
7 d1g8fa3 c.37.1.15 (A:390-511) 25.0 16 0.0011 26.1 1.9 52 88-163 16-69 (122)
8 d1qf9a_ c.37.1.1 (A:) UMP/CMP 22.2 17 0.0013 24.3 1.6 18 87-104 15-32 (194)
9 d2bdta1 c.37.1.25 (A:1-176) Hy 21.2 17 0.0012 22.7 1.2 18 87-104 11-28 (176)
10 d2cdna1 c.37.1.1 (A:1-181) Ade 20.7 20 0.0014 23.8 1.6 18 87-104 9-26 (181)
11 d1s3ga1 c.37.1.1 (A:1-125,A:16 20.5 20 0.0014 23.9 1.6 18 87-104 9-26 (182)
12 d1m8pa3 c.37.1.15 (A:391-573) 20.5 18 0.0013 22.6 1.3 19 87-105 15-33 (183)
No 1
>d2axtm1 f.23.35.1 (M:1-36) Photosystem II reaction center protein M, PsbM {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=60.74 E-value=2.4 Score=25.67 Aligned_cols=29 Identities=28% Similarity=0.409 Sum_probs=21.6
Q ss_pred ccCCcchhhhhhhhhccchHHHHHHHHHhc
Q 030344 144 QRNDSVFFATIGAFVILPPFIILGIAVLTG 173 (179)
Q Consensus 144 qRnDs~fFAtigaFvllPPliIL~iAv~tG 173 (179)
+-||-+|-|| +.|||+|-...|...+.|.
T Consensus 2 evN~Lg~iAt-~LFilvPt~FLliLyvqT~ 30 (36)
T d2axtm1 2 EVNQLGLIAT-ALFVLVPSVFLIILYVQTE 30 (36)
T ss_dssp CCCTTHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHH-HHHHHHHHHHHHHhheeec
Confidence 3478888887 5899999877777776653
No 2
>d2j0td1 b.40.3.1 (D:1-124) TIMP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.71 E-value=7.7 Score=26.22 Aligned_cols=15 Identities=20% Similarity=0.390 Sum_probs=13.2
Q ss_pred ccchhhHHHHHHHHH
Q 030344 121 SEKFLTISQKRNIRR 135 (179)
Q Consensus 121 a~~~lTiSQkRNikR 135 (179)
.|..||..|||.+++
T Consensus 104 ~W~~lt~~qrr~l~~ 118 (124)
T d2j0td1 104 PWNSLSLAQRRGFTK 118 (124)
T ss_dssp EGGGSCHHHHHHHHH
T ss_pred EhHHCCHHHHHhhhh
Confidence 588899999999974
No 3
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=33.46 E-value=7.9 Score=25.20 Aligned_cols=26 Identities=27% Similarity=0.344 Sum_probs=22.1
Q ss_pred CCcccCCCCccccHHHHHHHHHcCcC
Q 030344 81 EGYESDGSSRKLTIRDQLAQLVGDRD 106 (179)
Q Consensus 81 ~G~Es~~s~~~~TIreQLaal~ge~~ 106 (179)
+|..-..+++++|+.++|+..++..+
T Consensus 25 IgI~G~~GSGKSTla~~L~~~l~~~~ 50 (198)
T d1rz3a_ 25 LGIDGLSRSGKTTLANQLSQTLREQG 50 (198)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHhcccc
Confidence 47777779999999999999988653
No 4
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=26.74 E-value=13 Score=23.52 Aligned_cols=19 Identities=26% Similarity=0.247 Sum_probs=16.4
Q ss_pred CCCccccHHHHHHHHHcCc
Q 030344 87 GSSRKLTIRDQLAQLVGDR 105 (179)
Q Consensus 87 ~s~~~~TIreQLaal~ge~ 105 (179)
.+++++||...|+..+|-.
T Consensus 13 pGsGKTTia~~La~~l~~~ 31 (173)
T d1rkba_ 13 PGVGKTTLGKELASKSGLK 31 (173)
T ss_dssp TTSSHHHHHHHHHHHHCCE
T ss_pred CCCCHHHHHHHHHHHHCCc
Confidence 4889999999999999753
No 5
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.44 E-value=14 Score=24.04 Aligned_cols=26 Identities=12% Similarity=-0.095 Sum_probs=19.9
Q ss_pred CCccccHHHHHHHHHcCcCCcccccc
Q 030344 88 SSRKLTIRDQLAQLVGDRDDEFSIPL 113 (179)
Q Consensus 88 s~~~~TIreQLaal~ge~~~eftiPl 113 (179)
+++++||+..|+..++....+.....
T Consensus 29 GSGKTTiAk~La~~l~~~~~~~~~~~ 54 (195)
T d1x6va3 29 GAGKTTVSMALEEYLVCHGIPCYTLD 54 (195)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCHHHHHHHHHHHHHhcCCCccchh
Confidence 88999999999999987655433333
No 6
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=25.18 E-value=14 Score=24.10 Aligned_cols=18 Identities=17% Similarity=0.097 Sum_probs=15.9
Q ss_pred CCCccccHHHHHHHHHcC
Q 030344 87 GSSRKLTIRDQLAQLVGD 104 (179)
Q Consensus 87 ~s~~~~TIreQLaal~ge 104 (179)
-++++.||.+.|+..||-
T Consensus 9 pGSGKsT~a~~La~~~~~ 26 (182)
T d1zina1 9 PGAGKGTQAEKIVAAYGI 26 (182)
T ss_dssp TTSSHHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHHHHHHCC
Confidence 378999999999999974
No 7
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.01 E-value=16 Score=26.09 Aligned_cols=52 Identities=13% Similarity=0.008 Sum_probs=36.1
Q ss_pred CCccccHHHHHHHHHcCc-C-CcccccccccccccccchhhHHHHHHHHHHHHHHHhhccCCcchhhhhhhhhccchH
Q 030344 88 SSRKLTIRDQLAQLVGDR-D-DEFSIPLGKNLKKVSEKFLTISQKRNIRRQAYLNEVSQRNDSVFFATIGAFVILPPF 163 (179)
Q Consensus 88 s~~~~TIreQLaal~ge~-~-~eftiPlgk~lK~~a~~~lTiSQkRNikRQayL~~VsqRnDs~fFAtigaFvllPPl 163 (179)
++++-||..-|.....+. + +-+|+=-|+ ||+|-.|+..---|+ |+||++|+.
T Consensus 16 ~~gk~~ia~al~~~l~q~~G~R~vtll~~~----------------ni~ri~fva~e~~k~--------G~~~iv~~~ 69 (122)
T d1g8fa3 16 TVSREQLSIALLSTFLQFGGGRYYKIFEHN----------------NKTELLSLIQDFIGS--------GSGLIIPDQ 69 (122)
T ss_dssp CSCHHHHHHHHHHHHTTSCSCCCEEECCCT----------------TCHHHHTTHHHHHHT--------TCEEEESSC
T ss_pred CCCHHHHHHHHHHHHHHhcCCcceEEecCC----------------CHHHHHHHHHHHHhc--------CCEEEEecC
Confidence 667889999997777773 3 345443333 888888876665565 778888763
No 8
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=22.16 E-value=17 Score=24.25 Aligned_cols=18 Identities=22% Similarity=-0.006 Sum_probs=15.9
Q ss_pred CCCccccHHHHHHHHHcC
Q 030344 87 GSSRKLTIRDQLAQLVGD 104 (179)
Q Consensus 87 ~s~~~~TIreQLaal~ge 104 (179)
.++++.|+.++|+..||-
T Consensus 15 pGSGKsT~a~~La~~~g~ 32 (194)
T d1qf9a_ 15 PGSGKGTQCANIVRDFGW 32 (194)
T ss_dssp TTSSHHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHHHHHHCC
Confidence 488999999999999973
No 9
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=21.16 E-value=17 Score=22.69 Aligned_cols=18 Identities=22% Similarity=0.195 Sum_probs=16.0
Q ss_pred CCCccccHHHHHHHHHcC
Q 030344 87 GSSRKLTIRDQLAQLVGD 104 (179)
Q Consensus 87 ~s~~~~TIreQLaal~ge 104 (179)
.+++++||..+|+..++.
T Consensus 11 ~GsGKTTva~~L~~~~~~ 28 (176)
T d2bdta1 11 AGVGKSTTCKRLAAQLDN 28 (176)
T ss_dssp TTSSHHHHHHHHHHHSSS
T ss_pred CCCCHHHHHHHHHHHcCC
Confidence 488999999999999875
No 10
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=20.72 E-value=20 Score=23.81 Aligned_cols=18 Identities=28% Similarity=0.130 Sum_probs=16.0
Q ss_pred CCCccccHHHHHHHHHcC
Q 030344 87 GSSRKLTIRDQLAQLVGD 104 (179)
Q Consensus 87 ~s~~~~TIreQLaal~ge 104 (179)
.++++.|+.+.|++.||-
T Consensus 9 pGsGKsT~a~~La~~~g~ 26 (181)
T d2cdna1 9 PGAGKGTQAVKLAEKLGI 26 (181)
T ss_dssp TTSSHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHCC
Confidence 378999999999999974
No 11
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=20.55 E-value=20 Score=23.88 Aligned_cols=18 Identities=22% Similarity=0.222 Sum_probs=15.9
Q ss_pred CCCccccHHHHHHHHHcC
Q 030344 87 GSSRKLTIRDQLAQLVGD 104 (179)
Q Consensus 87 ~s~~~~TIreQLaal~ge 104 (179)
.++++.|+.+.|+..||-
T Consensus 9 pGSGKsT~a~~La~~~g~ 26 (182)
T d1s3ga1 9 PGAGKGTQADRIVEKYGT 26 (182)
T ss_dssp TTSSHHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHHHHHHCC
Confidence 378999999999999974
No 12
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=20.50 E-value=18 Score=22.64 Aligned_cols=19 Identities=21% Similarity=0.123 Sum_probs=16.3
Q ss_pred CCCccccHHHHHHHHHcCc
Q 030344 87 GSSRKLTIRDQLAQLVGDR 105 (179)
Q Consensus 87 ~s~~~~TIreQLaal~ge~ 105 (179)
.+++++||+..|+..++.+
T Consensus 15 ~GsGKTTia~~La~~L~~~ 33 (183)
T d1m8pa3 15 MNSGKDAIARALQVTLNQQ 33 (183)
T ss_dssp TTSSHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhhc
Confidence 3889999999999998754
Done!