BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030346
(179 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1EKJ|A Chain A, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|B Chain B, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|C Chain C, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|D Chain D, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|E Chain E, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|F Chain F, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|G Chain G, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|H Chain H, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
Length = 221
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Query: 91 DKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVR 150
+++K FL FKK+K+ +N Y LA GQ+P FMV AC+DSRVCPS++L FQPGEAF+VR
Sbjct: 15 ERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVR 74
Query: 151 NVANMVPPCESGP-SETNAALEFAVNSVK 178
NVAN+VPP + + T AA+E+AV +K
Sbjct: 75 NVANLVPPYDQAKYAGTGAAIEYAVLHLK 103
>pdb|3E3G|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3G|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3G|C Chain C, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3G|D Chain D, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3G|E Chain E, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3G|F Chain F, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3I|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|C Chain C, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|D Chain D, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|E Chain E, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|F Chain F, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|G Chain G, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|H Chain H, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|I Chain I, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|J Chain J, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|K Chain K, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|L Chain L, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
Length = 229
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 90 FDKMKHRF---LSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEA 146
DK+K F S+ ++ EN +++ LAD Q P ++ IAC+DSRV + +PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIACSDSRVPAEKLTNLEPGEL 60
Query: 147 FIVRNVANMV 156
F+ RNVAN V
Sbjct: 61 FVHRNVANQV 70
>pdb|2A8C|A Chain A, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8C|B Chain B, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8C|C Chain C, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8C|D Chain D, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8C|E Chain E, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8C|F Chain F, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8D|A Chain A, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
pdb|2A8D|B Chain B, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
pdb|2A8D|C Chain C, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
pdb|2A8D|D Chain D, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
pdb|2A8D|E Chain E, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
pdb|2A8D|F Chain F, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
Length = 229
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 90 FDKMKHRF---LSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEA 146
DK+K F S+ ++ EN +++ LAD Q P ++ I C+DSRV + +PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGEL 60
Query: 147 FIVRNVANMV 156
F+ RNVAN V
Sbjct: 61 FVHRNVANQV 70
>pdb|3E28|A Chain A, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E28|B Chain B, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E28|C Chain C, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E28|D Chain D, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E28|E Chain E, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E28|F Chain F, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E2A|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2A|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2A|C Chain C, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2A|D Chain D, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2A|E Chain E, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2A|F Chain F, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2W|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
pdb|3E2W|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
pdb|3E2W|C Chain C, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
pdb|3E2W|D Chain D, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
pdb|3E2W|E Chain E, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
pdb|3E2W|F Chain F, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
Length = 229
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 90 FDKMKHRF---LSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEA 146
DK+K F S+ ++ EN +++ LAD Q P ++ I C+DSRV + +PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGEL 60
Query: 147 FIVRNVANMV 156
F+ RNVAN V
Sbjct: 61 FVHRNVANQV 70
>pdb|3E24|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant W39f
pdb|3E24|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant W39f
Length = 229
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 90 FDKMKHRF---LSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEA 146
DK+K F S+ ++ EN +++ LAD Q P ++ I C+DSRV + +PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLFIGCSDSRVPAEKLTNLEPGEL 60
Query: 147 FIVRNVANMV 156
F+ RNVAN V
Sbjct: 61 FVHRNVANQV 70
>pdb|3MF3|A Chain A, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
pdb|3MF3|B Chain B, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
pdb|3MF3|C Chain C, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
pdb|3MF3|D Chain D, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
pdb|3MF3|E Chain E, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
pdb|3MF3|F Chain F, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
Length = 221
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 90 FDKMKHRF---LSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEA 146
DK+K F S+ ++ EN +++ LAD Q P ++ I C+DSRV + +PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGEL 60
Query: 147 FIVRNVANMV 156
F+ RNVAN V
Sbjct: 61 FVHRNVANQV 70
>pdb|3UCJ|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Acetazolamide
pdb|3UCJ|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Acetazolamide
pdb|3UCK|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Phosphate
pdb|3UCK|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Phosphate
pdb|3UCM|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Thiocyanate
pdb|3UCM|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Thiocyanate
pdb|3UCN|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With Azide
pdb|3UCN|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With Azide
pdb|3UCO|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With Iodide
pdb|3UCO|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With Iodide
Length = 227
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 111 HYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAAL 170
++ +A QAP+++ I CADSRV P+ + PGE F+ RNV N+V + + L
Sbjct: 30 YFSKVAGSQAPEYLYIGCADSRVSPAQLFNMAPGEVFVQRNVGNLV---SNKDLNCMSCL 86
Query: 171 EFAVNSVK 178
E+ V+ +K
Sbjct: 87 EYTVDHLK 94
>pdb|1I6O|A Chain A, Crystal Structure Of E. Coli Beta Carbonic Anhydrase
(Ecca)
pdb|1I6O|B Chain B, Crystal Structure Of E. Coli Beta Carbonic Anhydrase
(Ecca)
Length = 220
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 112 YQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMV 156
++ LA Q P+F+ I C+DSRV + G +PGE F+ RNVAN+V
Sbjct: 26 FEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLV 70
>pdb|3E2X|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant V47a
pdb|3E2X|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant V47a
pdb|3E31|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant V47a
pdb|3E31|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant V47a
pdb|3E3F|A Chain A, H. Influenzae Beta-carbonic Anhydrase, Variant V47a With
100 Mm Bicarbonate
pdb|3E3F|B Chain B, H. Influenzae Beta-carbonic Anhydrase, Variant V47a With
100 Mm Bicarbonate
Length = 229
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 90 FDKMKHRF---LSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEA 146
DK+K F S+ ++ EN +++ LAD Q P ++ I C+DSR + +PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIGCSDSRAPAEKLTNLEPGEL 60
Query: 147 FIVRNVANMV 156
F+ RNVAN V
Sbjct: 61 FVHRNVANQV 70
>pdb|1I6P|A Chain A, Crystal Structure Of E. Coli Beta Carbonic Anhydrase
(Ecca)
pdb|1T75|A Chain A, Crystal Structure Of Escherichia Coli Beta Carbonic
Anhydrase
pdb|1T75|B Chain B, Crystal Structure Of Escherichia Coli Beta Carbonic
Anhydrase
pdb|1T75|D Chain D, Crystal Structure Of Escherichia Coli Beta Carbonic
Anhydrase
pdb|1T75|E Chain E, Crystal Structure Of Escherichia Coli Beta Carbonic
Anhydrase
pdb|2ESF|A Chain A, Identification Of A Novel Non-catalytic Bicarbonate
Binding Site In Eubacterial Beta-carbonic Anhydrase
pdb|2ESF|B Chain B, Identification Of A Novel Non-catalytic Bicarbonate
Binding Site In Eubacterial Beta-carbonic Anhydrase
Length = 220
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 112 YQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMV 156
++ LA Q P+F+ I C+DSRV + G +PGE F+ RNVAN+V
Sbjct: 26 FEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLV 70
>pdb|3E1V|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant D44n
pdb|3E1V|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant D44n
pdb|3E1W|A Chain A, H. Influenzae Beta-carbonic Anhydrase, Variant D44n In 100
Mm Sodium Bicarbonate
pdb|3E1W|B Chain B, H. Influenzae Beta-carbonic Anhydrase, Variant D44n In 100
Mm Sodium Bicarbonate
Length = 229
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 90 FDKMKHRF---LSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEA 146
DK+K F S+ ++ EN +++ LAD Q P ++ I C++SRV + +PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIGCSNSRVPAEKLTNLEPGEL 60
Query: 147 FIVRNVANMV 156
F+ RNVAN V
Sbjct: 61 FVHRNVANQV 70
>pdb|3QY1|A Chain A, 1.54a Resolution Crystal Structure Of A Beta-Carbonic
Anhydrase From Salmonella Enterica Subsp. Enterica
Serovar Typhimurium Str. Lt2
pdb|3QY1|B Chain B, 1.54a Resolution Crystal Structure Of A Beta-Carbonic
Anhydrase From Salmonella Enterica Subsp. Enterica
Serovar Typhimurium Str. Lt2
Length = 223
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 112 YQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMV 156
++ LA Q P+F+ I C+DSRV + G +PGE F+ RNVAN+V
Sbjct: 29 FEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLV 73
>pdb|1DDZ|A Chain A, X-Ray Structure Of A Beta-Carbonic Anhydrase From The Red
Alga, Porphyridium Purpureum R-1
pdb|1DDZ|B Chain B, X-Ray Structure Of A Beta-Carbonic Anhydrase From The Red
Alga, Porphyridium Purpureum R-1
Length = 496
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 99 SFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPP 158
+++++ ++ E + LA+GQ+P+++ I CADSRV + +L GE F+ RN+AN
Sbjct: 45 AWRQEMLKQDPEFFNRLANGQSPEYLWIGCADSRVPANQLLDLPAGEVFVHRNIANQ--- 101
Query: 159 CESGPSETNAALEFAVNSVK 178
C + L++AV +K
Sbjct: 102 CIHSDISFLSVLQYAVQYLK 121
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 99 SFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPP 158
+++++ ++ + + NLA Q P+ + I CADSRV + I+ GE F+ RN+AN
Sbjct: 299 NWRQKMLKQDPQFFSNLAHTQTPEILWIGCADSRVPANQIINLPAGEVFVHRNIANQ--- 355
Query: 159 CESGPSETNAALEFAVNSVK 178
C + L++AV +K
Sbjct: 356 CIHSDMSFLSVLQYAVQYLK 375
>pdb|2W3N|A Chain A, Structure And Inhibition Of The Co2-Sensing Carbonic
Anhydrase Can2 From The Pathogenic Fungus Cryptococcus
Neoformans
pdb|2W3N|B Chain B, Structure And Inhibition Of The Co2-Sensing Carbonic
Anhydrase Can2 From The Pathogenic Fungus Cryptococcus
Neoformans
pdb|2W3N|C Chain C, Structure And Inhibition Of The Co2-Sensing Carbonic
Anhydrase Can2 From The Pathogenic Fungus Cryptococcus
Neoformans
Length = 239
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 118 GQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSV 177
GQAP F+ I CADSRV I+ +PG+ F+ RNVAN P + + A L +A+ +V
Sbjct: 58 GQAPNFLWIGCADSRVPEVTIMARKPGDVFVQRNVANQFKPED---DSSQALLNYAIMNV 114
>pdb|2W3Q|A Chain A, Structure And Inhibition Of The Co2-Sensing Carbonic
Anhydrase Can2 From The Pathogenic Fungus Cryptococcus
Neoformans
Length = 243
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 118 GQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSV 177
GQAP F+ I CADSRV I+ +PG+ F+ RNVAN P + + A L +A+ +V
Sbjct: 62 GQAPNFLWIGCADSRVPEVTIMARKPGDVFVQRNVANQFKPED---DSSQALLNYAIMNV 118
>pdb|3EYX|A Chain A, Crystal Structure Of Carbonic Anhydrase Nce103 From
Saccharomyces Cerevisiae
pdb|3EYX|B Chain B, Crystal Structure Of Carbonic Anhydrase Nce103 From
Saccharomyces Cerevisiae
Length = 216
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 116 ADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVN 175
A GQ+P + I C+DSR N LG PGE F +NVAN+ C S A LEFA+
Sbjct: 40 AKGQSPHTLFIGCSDSRY-NENCLGVLPGEVFTWKNVANI---CHSEDLTLKATLEFAII 95
Query: 176 SVK 178
+K
Sbjct: 96 CLK 98
>pdb|2A5V|A Chain A, Crystal Structure Of M. Tuberculosis Beta Carbonic
Anhydrase, Rv3588c, Tetrameric Form
pdb|2A5V|B Chain B, Crystal Structure Of M. Tuberculosis Beta Carbonic
Anhydrase, Rv3588c, Tetrameric Form
pdb|2A5V|C Chain C, Crystal Structure Of M. Tuberculosis Beta Carbonic
Anhydrase, Rv3588c, Tetrameric Form
pdb|2A5V|D Chain D, Crystal Structure Of M. Tuberculosis Beta Carbonic
Anhydrase, Rv3588c, Tetrameric Form
Length = 213
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 96 RFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANM 155
RF++ + Q ++++H LA GQ P ++ CADSRV I G+ F+VR ++
Sbjct: 25 RFVAGRPQHPSQSVDHRAGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVVRTAGHV 84
Query: 156 VPPCESGPSETNAALEFAVN 175
+ G ++E+AV
Sbjct: 85 IDSAVLG------SIEYAVT 98
>pdb|1YM3|A Chain A, Crystal Structure Of Carbonic Anhydrase Rv3588c From
Mycobacterium Tuberculosis
Length = 215
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 96 RFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANM 155
RF++ + Q ++++H LA GQ P ++ CADSRV I G+ F+VR ++
Sbjct: 27 RFVAGRPQHPSQSVDHRAGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVVRTAGHV 86
Query: 156 VPPCESGPSETNAALEFAVN 175
+ G ++E+AV
Sbjct: 87 IDSAVLG------SIEYAVT 100
>pdb|3VQJ|A Chain A, Crystal Structutre Of Thiobacillus Thioparus Thi115
Carbonyl Sulfide Hydrolase
pdb|3VRK|A Chain A, Crystal Structutre Of Thiobacillus Thioparus Thi115
Carbonyl Sulfide Hydrolase / Thiocyanate Complex
Length = 219
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 122 KFMVIACADSRVCPSNILGFQPGEAFIVRNVANMV 156
+ V+AC D+R+ ++LG Q GEA I+RN ++
Sbjct: 38 RVAVVACMDARLDVEDLLGLQTGEAHIIRNAGGVI 72
>pdb|3TEO|A Chain A, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|B Chain B, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|C Chain C, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|D Chain D, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|E Chain E, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|F Chain F, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|G Chain G, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|H Chain H, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|I Chain I, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|J Chain J, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|K Chain K, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|L Chain L, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|M Chain M, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|N Chain N, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|O Chain O, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|P Chain P, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
Length = 204
Score = 33.5 bits (75), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 122 KFMVIACADSRVCPSNILGFQPGEAFIVRNVANMV 156
+ V+ C D RV LG QP +A I RN +V
Sbjct: 29 RLWVLTCXDERVHIEQSLGIQPDDAHIYRNAGGIV 63
>pdb|1G5C|A Chain A, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
pdb|1G5C|B Chain B, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
pdb|1G5C|C Chain C, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
pdb|1G5C|D Chain D, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
pdb|1G5C|E Chain E, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
pdb|1G5C|F Chain F, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
Length = 170
Score = 33.5 bits (75), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 111 HYQNLAD-GQAPKFMVIACADSRVCP--SNILGFQPGEAFIVRNVANMV 156
+++L+D +PK +I C DSR+ LG G+A +++N N+V
Sbjct: 14 RFRDLSDLKHSPKLCIITCMDSRLIDLLERALGIGRGDAKVIKNAGNIV 62
>pdb|3TEN|A Chain A, Holo Form Of Carbon Disulfide Hydrolase
pdb|3TEN|B Chain B, Holo Form Of Carbon Disulfide Hydrolase
pdb|3TEN|C Chain C, Holo Form Of Carbon Disulfide Hydrolase
pdb|3TEN|D Chain D, Holo Form Of Carbon Disulfide Hydrolase
pdb|3TEN|E Chain E, Holo Form Of Carbon Disulfide Hydrolase
pdb|3TEN|F Chain F, Holo Form Of Carbon Disulfide Hydrolase
pdb|3TEN|G Chain G, Holo Form Of Carbon Disulfide Hydrolase
pdb|3TEN|H Chain H, Holo Form Of Carbon Disulfide Hydrolase
Length = 204
Score = 33.5 bits (75), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 122 KFMVIACADSRVCPSNILGFQPGEAFIVRNVANMV 156
+ V+ C D RV LG QP +A I RN +V
Sbjct: 29 RLWVLTCMDERVHIEQSLGIQPDDAHIYRNAGGIV 63
>pdb|1YLK|A Chain A, Crystal Structure Of Rv1284 From Mycobacterium
Tuberculosis In Complex With Thiocyanate
pdb|1YLK|B Chain B, Crystal Structure Of Rv1284 From Mycobacterium
Tuberculosis In Complex With Thiocyanate
pdb|1YLK|C Chain C, Crystal Structure Of Rv1284 From Mycobacterium
Tuberculosis In Complex With Thiocyanate
pdb|1YLK|D Chain D, Crystal Structure Of Rv1284 From Mycobacterium
Tuberculosis In Complex With Thiocyanate
Length = 172
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 125 VIACADSRVCPSNILGFQPGEAFIVRNVANMV 156
++AC D+R+ +LG + GEA ++RN +V
Sbjct: 41 IVACMDARLDVYRMLGIKEGEAHVIRNAGCVV 72
>pdb|3QYF|A Chain A, Crystal Structure Of The Crispr-Associated Protein Sso1393
From Sulfolobus Solfataricus
pdb|3QYF|B Chain B, Crystal Structure Of The Crispr-Associated Protein Sso1393
From Sulfolobus Solfataricus
Length = 324
Score = 30.0 bits (66), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Query: 66 EGITQEFQVDKLETAAE--VENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKF 123
EGI E K ++ E E D FDK+ +R L FK+Q + E Y N G P+
Sbjct: 119 EGIRSELVTVKTISSEENFYEGIVDLFDKVIYRILKFKEQ----DNEVYINATPGLKPES 174
Query: 124 MVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVN 175
+ + A + ++++ ++ E V V PP P + + FA++
Sbjct: 175 IFLTLA-GLLAGADLIYYKYQEFNDV--VILPSPPITIRPKYLDWLIRFAIS 223
>pdb|3LAS|A Chain A, Crystal Structure Of Carbonic Anhydrase From Streptococcus
Mutans To 1.4 Angstrom Resolution
pdb|3LAS|B Chain B, Crystal Structure Of Carbonic Anhydrase From Streptococcus
Mutans To 1.4 Angstrom Resolution
Length = 166
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 122 KFMVIACADSRVCPSNILGFQPGEAFIVRNVANMV 156
+ ++ C DSR+ + LG G+A I+RN V
Sbjct: 32 RVAIVTCMDSRLHVAPALGLALGDAHILRNAGGRV 66
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,726,512
Number of Sequences: 62578
Number of extensions: 121594
Number of successful extensions: 228
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 204
Number of HSP's gapped (non-prelim): 26
length of query: 179
length of database: 14,973,337
effective HSP length: 93
effective length of query: 86
effective length of database: 9,153,583
effective search space: 787208138
effective search space used: 787208138
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (23.1 bits)