Query 030348
Match_columns 179
No_of_seqs 302 out of 1501
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 20:04:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030348.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030348hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.6 1.5E-14 5.2E-19 93.6 9.3 66 47-113 2-67 (68)
2 4a4j_A Pacszia, cation-transpo 99.5 3.6E-13 1.2E-17 86.6 10.1 65 47-111 2-69 (69)
3 3dxs_X Copper-transporting ATP 99.5 3.1E-13 1E-17 88.2 9.6 68 46-113 1-72 (74)
4 3fry_A Probable copper-exporti 99.4 6.3E-13 2.2E-17 86.9 9.0 66 46-113 4-70 (73)
5 1cc8_A Protein (metallochapero 99.4 1.1E-12 3.7E-17 85.6 10.0 67 46-112 4-71 (73)
6 2crl_A Copper chaperone for su 99.4 7.7E-12 2.6E-16 86.9 11.1 73 44-116 16-88 (98)
7 2xmm_A SSR2857 protein, ATX1; 99.3 7.5E-12 2.6E-16 78.1 6.7 60 49-108 3-63 (64)
8 2roe_A Heavy metal binding pro 99.3 7.4E-12 2.5E-16 79.4 6.7 62 50-111 3-65 (66)
9 1osd_A MERP, hypothetical prot 99.3 3.8E-11 1.3E-15 76.6 9.7 66 46-111 2-71 (72)
10 2xmw_A PACS-N, cation-transpor 99.3 4.7E-11 1.6E-15 75.9 9.9 65 47-111 3-70 (71)
11 2l3m_A Copper-ION-binding prot 99.3 4.8E-11 1.6E-15 76.1 9.9 63 46-108 4-70 (71)
12 2k2p_A Uncharacterized protein 99.3 1E-11 3.4E-16 84.1 6.8 65 44-108 19-84 (85)
13 1mwy_A ZNTA; open-faced beta-s 99.3 7.9E-11 2.7E-15 75.9 10.4 66 46-111 2-69 (73)
14 1q8l_A Copper-transporting ATP 99.2 5.1E-11 1.8E-15 79.4 9.5 70 46-115 8-81 (84)
15 3cjk_B Copper-transporting ATP 99.2 8.7E-11 3E-15 75.9 10.3 65 48-112 3-71 (75)
16 1aw0_A Menkes copper-transport 99.2 4.5E-11 1.5E-15 76.3 8.8 64 48-111 4-71 (72)
17 2g9o_A Copper-transporting ATP 99.2 5.3E-11 1.8E-15 80.9 9.0 69 47-115 3-78 (90)
18 1kvi_A Copper-transporting ATP 99.2 7.9E-11 2.7E-15 77.0 9.4 68 45-112 6-77 (79)
19 1cpz_A Protein (COPZ); copper 99.2 7.5E-11 2.6E-15 74.3 8.9 62 50-111 3-68 (68)
20 2qif_A Copper chaperone COPZ; 99.2 1.3E-10 4.5E-15 72.7 9.6 62 47-108 2-67 (69)
21 1fvq_A Copper-transporting ATP 99.2 9E-11 3.1E-15 74.9 8.9 65 48-112 3-70 (72)
22 1y3j_A Copper-transporting ATP 99.2 4.2E-11 1.4E-15 78.0 7.4 67 46-112 2-72 (77)
23 1opz_A Potential copper-transp 99.2 1.3E-10 4.5E-15 74.6 9.4 66 46-111 5-74 (76)
24 2kt2_A Mercuric reductase; nme 99.2 1.1E-10 3.7E-15 74.1 8.8 62 50-111 3-67 (69)
25 1yjr_A Copper-transporting ATP 99.2 9E-11 3.1E-15 75.5 7.7 65 47-111 4-72 (75)
26 2kkh_A Putative heavy metal tr 99.2 3.5E-10 1.2E-14 77.2 10.8 73 44-116 13-89 (95)
27 1yg0_A COP associated protein; 99.2 1.2E-10 4E-15 73.0 7.6 61 48-108 2-65 (66)
28 2ldi_A Zinc-transporting ATPas 99.2 1.3E-10 4.4E-15 73.4 7.5 64 46-109 2-69 (71)
29 1jww_A Potential copper-transp 99.1 2.2E-10 7.4E-15 74.7 8.7 67 47-113 3-73 (80)
30 2kyz_A Heavy metal binding pro 99.1 8.6E-11 2.9E-15 74.7 6.3 60 49-110 3-63 (67)
31 2ew9_A Copper-transporting ATP 99.1 3.5E-10 1.2E-14 82.4 8.9 65 47-111 80-148 (149)
32 2ofg_X Zinc-transporting ATPas 99.1 5.2E-10 1.8E-14 79.0 9.2 65 46-110 7-75 (111)
33 1p6t_A Potential copper-transp 99.0 6.9E-10 2.4E-14 81.2 8.5 66 47-112 74-143 (151)
34 1qup_A Superoxide dismutase 1 99.0 1.2E-09 4.1E-14 86.7 9.8 70 47-116 6-75 (222)
35 2aj0_A Probable cadmium-transp 99.0 9.2E-10 3.1E-14 70.5 6.2 58 48-109 4-62 (71)
36 2rop_A Copper-transporting ATP 99.0 2.5E-09 8.5E-14 82.6 9.7 68 47-114 122-193 (202)
37 2ew9_A Copper-transporting ATP 99.0 3.2E-09 1.1E-13 77.2 9.1 68 45-112 2-73 (149)
38 1jk9_B CCS, copper chaperone f 98.9 4.6E-09 1.6E-13 84.7 8.9 70 47-116 7-76 (249)
39 2rop_A Copper-transporting ATP 98.6 7.7E-08 2.6E-12 74.2 7.9 65 45-109 18-89 (202)
40 1p6t_A Potential copper-transp 98.6 2E-07 6.8E-12 67.9 9.0 63 46-108 5-71 (151)
41 3j09_A COPA, copper-exporting 98.5 2.9E-07 9.9E-12 84.2 8.8 63 48-110 3-69 (723)
42 2raq_A Conserved protein MTH88 85.7 6.4 0.00022 26.6 8.5 67 45-112 5-80 (97)
43 3bpd_A Uncharacterized protein 85.6 2.4 8.1E-05 28.8 5.8 67 45-112 5-80 (100)
44 2x3d_A SSO6206; unknown functi 83.4 5.3 0.00018 26.9 6.8 66 45-111 3-78 (96)
45 3cq1_A Putative uncharacterize 76.0 3.9 0.00013 27.5 4.4 35 48-82 42-82 (103)
46 1jdq_A TM006 protein, hypothet 74.0 17 0.00058 24.3 7.6 55 49-112 27-84 (98)
47 3lvj_C Sulfurtransferase TUSA; 72.0 17 0.00057 23.3 6.8 56 48-112 10-68 (82)
48 1uwd_A Hypothetical protein TM 70.7 6 0.00021 26.5 4.3 35 48-82 43-83 (103)
49 3hz7_A Uncharacterized protein 68.1 14 0.00048 24.1 5.6 53 50-112 3-60 (87)
50 2jsx_A Protein NAPD; TAT, proo 62.1 32 0.0011 22.8 6.7 44 59-102 17-61 (95)
51 3lno_A Putative uncharacterize 59.6 8.1 0.00028 26.2 3.3 35 49-83 46-87 (108)
52 1je3_A EC005, hypothetical 8.6 47.0 32 0.0011 22.8 4.6 55 48-111 27-84 (97)
53 1fvg_A Peptide methionine sulf 46.4 83 0.0028 23.9 7.3 52 45-101 42-115 (199)
54 4gwb_A Peptide methionine sulf 44.7 41 0.0014 24.9 5.2 44 58-101 9-70 (168)
55 3b1j_C CP12; alpha/beta fold, 43.8 3.1 0.00011 21.2 -0.7 10 166-175 8-17 (26)
56 1nwa_A Peptide methionine sulf 43.5 93 0.0032 23.7 7.2 44 58-101 32-93 (203)
57 1ff3_A Peptide methionine sulf 41.9 94 0.0032 23.8 7.0 44 58-101 49-114 (211)
58 3bqh_A PILB, peptide methionin 32.3 68 0.0023 24.2 4.8 44 58-101 9-74 (193)
59 2j89_A Methionine sulfoxide re 32.1 77 0.0026 25.1 5.2 44 58-101 101-166 (261)
60 2k1h_A Uncharacterized protein 32.1 98 0.0034 20.4 5.1 40 63-104 40-81 (94)
61 2w7v_A General secretion pathw 32.0 1.1E+02 0.0038 20.2 5.6 51 63-114 16-72 (95)
62 1owx_A Lupus LA protein, SS-B, 31.9 1.3E+02 0.0043 20.8 7.0 56 49-104 19-76 (121)
63 3qv1_G CP12 protein; rossman f 30.6 8.3 0.00028 25.3 -0.5 14 165-178 64-79 (82)
64 3e0m_A Peptide methionine sulf 28.9 1.3E+02 0.0043 24.5 6.2 44 58-101 9-72 (313)
65 2kxw_B Sodium channel protein 27.1 49 0.0017 16.8 2.2 14 2-15 9-22 (27)
66 1pav_A Hypothetical protein TA 26.7 36 0.0012 21.2 2.1 52 50-110 8-62 (78)
67 3pim_A Peptide methionine sulf 25.7 1.3E+02 0.0043 22.6 5.2 36 44-84 17-54 (187)
68 2lj9_A CP12 domain-containing 25.1 12 0.0004 25.4 -0.6 14 165-178 81-96 (99)
69 1kaf_A Transcription regulator 21.9 1.9E+02 0.0066 19.6 5.0 42 70-112 42-83 (108)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.57 E-value=1.5e-14 Score=93.61 Aligned_cols=66 Identities=26% Similarity=0.490 Sum_probs=62.1
Q ss_pred eEEEEEEcCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEEccC
Q 030348 47 QTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPY 113 (179)
Q Consensus 47 ~~v~l~Vgm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~~~~ 113 (179)
.+.+|+|||+|.+|+.+|+++|++++|| ++++|+.+++++|.+..++++|.++|+++||++++|++
T Consensus 2 ~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 2 PKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred ceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence 4567888999999999999999999999 99999999999999989999999999999999998864
No 2
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.48 E-value=3.6e-13 Score=86.62 Aligned_cols=65 Identities=35% Similarity=0.548 Sum_probs=60.3
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEE--ecCCHHHHHHHHHhcCcceEEc
Q 030348 47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAV--GYVDRNKVLKAVRRAGKRAEFW 111 (179)
Q Consensus 47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~--g~~~~~~i~~~i~~~G~~a~~~ 111 (179)
++++|.| ||+|.+|+.+|+++|++++||.++++|+.+++++|. +..+.++|.++|++.||+++++
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 69 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL 69 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEeC
Confidence 4678999 999999999999999999999999999999999998 4489999999999999998764
No 3
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.48 E-value=3.1e-13 Score=88.22 Aligned_cols=68 Identities=24% Similarity=0.399 Sum_probs=62.2
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEccC
Q 030348 46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWPY 113 (179)
Q Consensus 46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~~ 113 (179)
+++++|.| ||+|.+|+.+|+++|++++||.++++|+..++++|..+ ++.+.|.++|+++||+++++..
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 72 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILAE 72 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEEE
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEccC
Confidence 35778999 99999999999999999999999999999999999854 6899999999999999988753
No 4
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.44 E-value=6.3e-13 Score=86.94 Aligned_cols=66 Identities=27% Similarity=0.410 Sum_probs=61.9
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEEccC
Q 030348 46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPY 113 (179)
Q Consensus 46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~~~~ 113 (179)
+++.+|.| ||+|.+|+.+|+++|++ +||..+++|+..++++|..+ +.+.|.++|+++||.+++++.
T Consensus 4 m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~~ 70 (73)
T 3fry_A 4 VEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRSS 70 (73)
T ss_dssp CEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECCS
T ss_pred cEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecCc
Confidence 56788999 99999999999999999 99999999999999999988 999999999999999988763
No 5
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.44 E-value=1.1e-12 Score=85.56 Aligned_cols=67 Identities=22% Similarity=0.463 Sum_probs=62.4
Q ss_pred ceEEEEEEcCcChhHHHHHHHHHHcCC-CeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEEcc
Q 030348 46 LQTVELKVRMCCTGCERVVKNAIYKLR-GVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWP 112 (179)
Q Consensus 46 ~~~v~l~Vgm~C~~C~~kI~~al~~~~-GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~~~ 112 (179)
+.+.+|+|.|+|.+|+.+|+++|++++ ||.++++|+..++++|.+..+.+.|.++|+++||++.+|.
T Consensus 4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (73)
T 1cc8_A 4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGK 71 (73)
T ss_dssp CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEE
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeee
Confidence 456778889999999999999999999 9999999999999999988899999999999999998875
No 6
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=7.7e-12 Score=86.87 Aligned_cols=73 Identities=26% Similarity=0.372 Sum_probs=66.6
Q ss_pred CcceEEEEEEcCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEEccCCCC
Q 030348 44 LSLQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNP 116 (179)
Q Consensus 44 ~~~~~v~l~Vgm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~~~~~~~ 116 (179)
+...+++|+|.|+|.+|+.+|+++|.+++||.++++|+..++++|.+.++.+.|.++|+++||++.++....+
T Consensus 16 ~~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~~~ 88 (98)
T 2crl_A 16 GTLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSG 88 (98)
T ss_dssp CCCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESCCC
T ss_pred ccceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCCCC
Confidence 4456778888999999999999999999999999999999999999888999999999999999999876554
No 7
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.29 E-value=7.5e-12 Score=78.08 Aligned_cols=60 Identities=25% Similarity=0.458 Sum_probs=56.4
Q ss_pred EEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcce
Q 030348 49 VELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRA 108 (179)
Q Consensus 49 v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a 108 (179)
..|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|.+..+.+.|.++|+++||.+
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEV 63 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCC
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 46899 9999999999999999999999999999999999997788999999999999975
No 8
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.29 E-value=7.4e-12 Score=79.41 Aligned_cols=62 Identities=37% Similarity=0.561 Sum_probs=57.2
Q ss_pred EEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEEc
Q 030348 50 ELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFW 111 (179)
Q Consensus 50 ~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~~ 111 (179)
.|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|.+..+.+.|.++|+++||.+..+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~ 65 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVL 65 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEEC
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEec
Confidence 5889 9999999999999999999999999999999999965588999999999999988654
No 9
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.27 E-value=3.8e-11 Score=76.65 Aligned_cols=66 Identities=35% Similarity=0.439 Sum_probs=59.0
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEc
Q 030348 46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFW 111 (179)
Q Consensus 46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~ 111 (179)
.++..|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+ .+.+.|.+.|++.||.+.+.
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1osd_A 2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK 71 (72)
T ss_dssp EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred ceEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEec
Confidence 34678999 99999999999999999999999999999999999754 57889999999999987653
No 10
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.27 E-value=4.7e-11 Score=75.89 Aligned_cols=65 Identities=32% Similarity=0.493 Sum_probs=57.7
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec--CCHHHHHHHHHhcCcceEEc
Q 030348 47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY--VDRNKVLKAVRRAGKRAEFW 111 (179)
Q Consensus 47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~i~~~G~~a~~~ 111 (179)
++..|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+ .+.+.|.++|++.||.+.++
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~ 70 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL 70 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEEE
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCceeC
Confidence 3567999 99999999999999999999999999999999999854 67888999999999987653
No 11
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.27 E-value=4.8e-11 Score=76.09 Aligned_cols=63 Identities=22% Similarity=0.445 Sum_probs=57.4
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcce
Q 030348 46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRA 108 (179)
Q Consensus 46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a 108 (179)
+.+..|+| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+ ++.+.|.+.|+++||.+
T Consensus 4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 45778999 99999999999999999999999999999999999743 67889999999999975
No 12
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.26 E-value=1e-11 Score=84.06 Aligned_cols=65 Identities=23% Similarity=0.312 Sum_probs=58.7
Q ss_pred CcceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcce
Q 030348 44 LSLQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRA 108 (179)
Q Consensus 44 ~~~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a 108 (179)
..+.+..|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|...++.+.|.++|+++||.+
T Consensus 19 ~~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 19 FQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP 84 (85)
T ss_dssp ---CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred ccccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 3456778999 9999999999999999999999999999999999998889999999999999975
No 13
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.25 E-value=7.9e-11 Score=75.93 Aligned_cols=66 Identities=32% Similarity=0.370 Sum_probs=58.3
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecC-CHHHHHHHHHhcCcceEEc
Q 030348 46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYV-DRNKVLKAVRRAGKRAEFW 111 (179)
Q Consensus 46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~-~~~~i~~~i~~~G~~a~~~ 111 (179)
+.+..|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+. ..+.|.+.|+++||.+...
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~~ 69 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDE 69 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEEC
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCccccc
Confidence 45678999 999999999999999999999999999999999998652 3678899999999987653
No 14
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.24 E-value=5.1e-11 Score=79.40 Aligned_cols=70 Identities=26% Similarity=0.398 Sum_probs=62.3
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEccCCC
Q 030348 46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWPYPN 115 (179)
Q Consensus 46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~~~~ 115 (179)
..++.|+| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+ ++.+.|.+.|+++||.+.++..+.
T Consensus 8 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~ 81 (84)
T 1q8l_A 8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQPK 81 (84)
T ss_dssp CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCCTT
T ss_pred ceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCCcc
Confidence 45678999 99999999999999999999999999999999999864 578899999999999987766443
No 15
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.24 E-value=8.7e-11 Score=75.90 Aligned_cols=65 Identities=25% Similarity=0.382 Sum_probs=58.9
Q ss_pred EEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEcc
Q 030348 48 TVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWP 112 (179)
Q Consensus 48 ~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~ 112 (179)
++.|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+ .+.+.|.+.|+++||.+.+..
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (75)
T 3cjk_B 3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 71 (75)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence 567999 99999999999999999999999999999999999854 578899999999999887653
No 16
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.24 E-value=4.5e-11 Score=76.34 Aligned_cols=64 Identities=22% Similarity=0.301 Sum_probs=58.3
Q ss_pred EEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEc
Q 030348 48 TVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFW 111 (179)
Q Consensus 48 ~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~ 111 (179)
+..|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+ ++.+.|.+.|+++||.+.+.
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1aw0_A 4 ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS 71 (72)
T ss_dssp EEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEeC
Confidence 567999 99999999999999999999999999999999999864 57889999999999987654
No 17
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.23 E-value=5.3e-11 Score=80.88 Aligned_cols=69 Identities=22% Similarity=0.257 Sum_probs=60.2
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhc---CcceEEccCCC
Q 030348 47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRA---GKRAEFWPYPN 115 (179)
Q Consensus 47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~---G~~a~~~~~~~ 115 (179)
.++.|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+ ++.+.|.++|+++ ||++.++....
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~~~ 78 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSEVE 78 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCCC-
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCCCc
Confidence 3567999 99999999999999999999999999999999999853 5788999999999 59887776543
No 18
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.23 E-value=7.9e-11 Score=76.96 Aligned_cols=68 Identities=24% Similarity=0.380 Sum_probs=60.9
Q ss_pred cceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEcc
Q 030348 45 SLQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWP 112 (179)
Q Consensus 45 ~~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~ 112 (179)
...+..|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+ .+.+.|.++|+++||.+.+.+
T Consensus 6 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 77 (79)
T 1kvi_A 6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 77 (79)
T ss_dssp TCEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECC
T ss_pred CcEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecC
Confidence 356778999 99999999999999999999999999999999999854 578899999999999987654
No 19
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.22 E-value=7.5e-11 Score=74.30 Aligned_cols=62 Identities=29% Similarity=0.467 Sum_probs=56.7
Q ss_pred EEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEc
Q 030348 50 ELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFW 111 (179)
Q Consensus 50 ~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~ 111 (179)
.|.| ||+|.+|..+|+++|.+++||.++++|+..++++|..+ .+.+.|.+.+++.||+++++
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 68 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEVI 68 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEEC
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcccC
Confidence 5889 99999999999999999999999999999999999854 57889999999999988753
No 20
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.21 E-value=1.3e-10 Score=72.70 Aligned_cols=62 Identities=29% Similarity=0.448 Sum_probs=56.0
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcce
Q 030348 47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRA 108 (179)
Q Consensus 47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a 108 (179)
.+..|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|..+ .+.+.|.+.|++.||.+
T Consensus 2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 3567999 99999999999999999999999999999999999754 57889999999999965
No 21
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.21 E-value=9e-11 Score=74.87 Aligned_cols=65 Identities=20% Similarity=0.391 Sum_probs=59.2
Q ss_pred EEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec--CCHHHHHHHHHhcCcceEEcc
Q 030348 48 TVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY--VDRNKVLKAVRRAGKRAEFWP 112 (179)
Q Consensus 48 ~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~i~~~G~~a~~~~ 112 (179)
+..|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+ .+.+.|.++|++.||.+.++.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~ 70 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence 457999 99999999999999999999999999999999999854 678899999999999998774
No 22
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.21 E-value=4.2e-11 Score=78.02 Aligned_cols=67 Identities=18% Similarity=0.253 Sum_probs=60.5
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEcc
Q 030348 46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWP 112 (179)
Q Consensus 46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~ 112 (179)
++++.|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+ ++.+.|.++|+++||.+.++.
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 72 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE 72 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence 45678999 99999999999999999999999999999999999854 578899999999999987764
No 23
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.20 E-value=1.3e-10 Score=74.62 Aligned_cols=66 Identities=17% Similarity=0.379 Sum_probs=59.4
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEc
Q 030348 46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFW 111 (179)
Q Consensus 46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~ 111 (179)
+.+..|+| ||+|.+|+.+|+++|.+++||.++.+|+..++++|..+ .+.+.|.+.|+++||.+.++
T Consensus 5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 74 (76)
T 1opz_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE 74 (76)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred ceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence 45678999 99999999999999999999999999999999999753 57889999999999987654
No 24
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.20 E-value=1.1e-10 Score=74.11 Aligned_cols=62 Identities=27% Similarity=0.350 Sum_probs=56.4
Q ss_pred EEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec--CCHHHHHHHHHhcCcceEEc
Q 030348 50 ELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY--VDRNKVLKAVRRAGKRAEFW 111 (179)
Q Consensus 50 ~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~i~~~G~~a~~~ 111 (179)
.|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+ .+.+.|.++|+++||.+.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 67 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATLA 67 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEECC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEeC
Confidence 4889 99999999999999999999999999999999998754 57889999999999987654
No 25
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.18 E-value=9e-11 Score=75.47 Aligned_cols=65 Identities=20% Similarity=0.349 Sum_probs=57.7
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEc
Q 030348 47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFW 111 (179)
Q Consensus 47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~ 111 (179)
.+..|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+ ++.+.|.++|+++||.+.+.
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 72 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLV 72 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEES
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCceee
Confidence 3467999 99999999999999999999999999999999999864 45678999999999987654
No 26
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.17 E-value=3.5e-10 Score=77.19 Aligned_cols=73 Identities=23% Similarity=0.297 Sum_probs=64.4
Q ss_pred CcceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEccCCCC
Q 030348 44 LSLQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWPYPNP 116 (179)
Q Consensus 44 ~~~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~~~~~ 116 (179)
..+.+..|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+ ++.+.|.++|+++||.+.++..+..
T Consensus 13 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~ 89 (95)
T 2kkh_A 13 KKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVNGET 89 (95)
T ss_dssp SCSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCCCCC
T ss_pred cceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecCCCc
Confidence 3466788999 99999999999999999999999999999999999854 5788999999999999988766553
No 27
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.16 E-value=1.2e-10 Score=72.97 Aligned_cols=61 Identities=18% Similarity=0.358 Sum_probs=55.2
Q ss_pred EEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec--CCHHHHHHHHHhcCcce
Q 030348 48 TVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY--VDRNKVLKAVRRAGKRA 108 (179)
Q Consensus 48 ~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~i~~~G~~a 108 (179)
+..|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+ .+.+.|.++|++.||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEV 65 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence 356899 99999999999999999999999999999999999854 57889999999999864
No 28
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.15 E-value=1.3e-10 Score=73.43 Aligned_cols=64 Identities=22% Similarity=0.404 Sum_probs=57.1
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceE
Q 030348 46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAE 109 (179)
Q Consensus 46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~ 109 (179)
+.+..|+| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+ .+.+.+.+.++++||.+.
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (71)
T 2ldi_A 2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA 69 (71)
T ss_dssp CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 34567999 99999999999999999999999999999999999753 577889999999999764
No 29
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.15 E-value=2.2e-10 Score=74.67 Aligned_cols=67 Identities=22% Similarity=0.403 Sum_probs=59.9
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEccC
Q 030348 47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWPY 113 (179)
Q Consensus 47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~~ 113 (179)
.+..|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+ .+.+.|.+.|+++||.+.++..
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~ 73 (80)
T 1jww_A 3 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE 73 (80)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECCS
T ss_pred eEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecCc
Confidence 4567999 99999999999999999999999999999999999753 5788999999999999887653
No 30
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.14 E-value=8.6e-11 Score=74.71 Aligned_cols=60 Identities=28% Similarity=0.359 Sum_probs=54.5
Q ss_pred EEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEE
Q 030348 49 VELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEF 110 (179)
Q Consensus 49 v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~ 110 (179)
..|.| ||+|.+|+.+|+++|.++ ||.++++|+..++++|..+.+ +.|.++|+++||++..
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~~ 63 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVES 63 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCCB
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCceee
Confidence 56999 999999999999999999 999999999999999987655 8899999999997643
No 31
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.10 E-value=3.5e-10 Score=82.41 Aligned_cols=65 Identities=18% Similarity=0.362 Sum_probs=59.4
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEc
Q 030348 47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFW 111 (179)
Q Consensus 47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~ 111 (179)
.++.|+| ||+|.+|+.+|+++|++++||.++++|+..++++|..+ ++.+.|.++|+++||++.++
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 148 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLA 148 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEECC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEec
Confidence 4678999 99999999999999999999999999999999999854 57899999999999988654
No 32
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.09 E-value=5.2e-10 Score=79.00 Aligned_cols=65 Identities=22% Similarity=0.368 Sum_probs=59.1
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEE
Q 030348 46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEF 110 (179)
Q Consensus 46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~ 110 (179)
+.++.|+| ||+|..|+.+|+++|++++||..+++|+..++++|..+ ++.+.|.++|+++||.+..
T Consensus 7 ~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~ 75 (111)
T 2ofg_X 7 LKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLAE 75 (111)
T ss_dssp CEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEEC
T ss_pred ceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeeee
Confidence 55778999 99999999999999999999999999999999999854 5788999999999998764
No 33
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.05 E-value=6.9e-10 Score=81.22 Aligned_cols=66 Identities=23% Similarity=0.423 Sum_probs=60.4
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEcc
Q 030348 47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWP 112 (179)
Q Consensus 47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~ 112 (179)
.++.|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+ ++.+.|.++|+++||++.++.
T Consensus 74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 143 (151)
T 1p6t_A 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG 143 (151)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESC
T ss_pred cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcC
Confidence 4678999 99999999999999999999999999999999999854 689999999999999987754
No 34
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.03 E-value=1.2e-09 Score=86.69 Aligned_cols=70 Identities=19% Similarity=0.401 Sum_probs=64.1
Q ss_pred eEEEEEEcCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEEccCCCC
Q 030348 47 QTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNP 116 (179)
Q Consensus 47 ~~v~l~Vgm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~~~~~~~ 116 (179)
.+++|+|.|+|.+|+.+|+++|++++||.++++|+..++++|.+.+++++|.++|+++||++.++....+
T Consensus 6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~~~ 75 (222)
T 1qup_A 6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP 75 (222)
T ss_dssp EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCSCT
T ss_pred eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCCCc
Confidence 3556888899999999999999999999999999999999999888999999999999999998876654
No 35
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.98 E-value=9.2e-10 Score=70.52 Aligned_cols=58 Identities=22% Similarity=0.445 Sum_probs=50.6
Q ss_pred EEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceE
Q 030348 48 TVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAE 109 (179)
Q Consensus 48 ~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~ 109 (179)
+..|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|.+..+ .+.|+++||.+.
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~~ 62 (71)
T 2aj0_A 4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFEH 62 (71)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTTT
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCcc
Confidence 567999 9999999999999999999999999999999999987654 456778888643
No 36
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.98 E-value=2.5e-09 Score=82.65 Aligned_cols=68 Identities=21% Similarity=0.346 Sum_probs=60.2
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEccCC
Q 030348 47 QTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWPYP 114 (179)
Q Consensus 47 ~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~~~ 114 (179)
.++.|+| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+ ++.+.|.++|+++||.+.++...
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 193 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSES 193 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC---
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCCC
Confidence 5678999 99999999999999999999999999999999999854 57899999999999999887543
No 37
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.96 E-value=3.2e-09 Score=77.22 Aligned_cols=68 Identities=22% Similarity=0.248 Sum_probs=60.7
Q ss_pred cceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEEcc
Q 030348 45 SLQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEFWP 112 (179)
Q Consensus 45 ~~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~~~ 112 (179)
.++++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+ .+.+.+.+.|++.||.+.+..
T Consensus 2 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 73 (149)
T 2ew9_A 2 APQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVME 73 (149)
T ss_dssp CCEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECS
T ss_pred CcEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeec
Confidence 366788999 99999999999999999999999999999999998753 578899999999999887653
No 38
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.91 E-value=4.6e-09 Score=84.71 Aligned_cols=70 Identities=19% Similarity=0.401 Sum_probs=63.4
Q ss_pred eEEEEEEcCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEEccCCCC
Q 030348 47 QTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNP 116 (179)
Q Consensus 47 ~~v~l~Vgm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~~~~~~~ 116 (179)
.+++|+|.|+|.+|+.+|+++|++++||.++++|+..++++|.+..++++|.++|+++||++.++....+
T Consensus 7 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~~~ 76 (249)
T 1jk9_B 7 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP 76 (249)
T ss_dssp EEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEESST
T ss_pred eeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccCCcc
Confidence 3456888899999999999999999999999999999999999888999999999999999988766554
No 39
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.64 E-value=7.7e-08 Score=74.15 Aligned_cols=65 Identities=22% Similarity=0.332 Sum_probs=55.9
Q ss_pred cceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcC---cceE
Q 030348 45 SLQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAG---KRAE 109 (179)
Q Consensus 45 ~~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G---~~a~ 109 (179)
.+.++.|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|..+ ++.+.|.++|++.| |.+.
T Consensus 18 ~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v~ 89 (202)
T 2rop_A 18 HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVS 89 (202)
T ss_dssp --CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEEE
T ss_pred ccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEEE
Confidence 356778999 99999999999999999999999999999999999754 67889999999883 6554
No 40
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.61 E-value=2e-07 Score=67.88 Aligned_cols=63 Identities=17% Similarity=0.424 Sum_probs=55.6
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcce
Q 030348 46 LQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRA 108 (179)
Q Consensus 46 ~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a 108 (179)
..+..|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|..+ .+...+.+.+++.||.+
T Consensus 5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 71 (151)
T 1p6t_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV 71 (151)
T ss_dssp CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence 34567999 99999999999999999999999999999999988743 57888999999999864
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.50 E-value=2.9e-07 Score=84.15 Aligned_cols=63 Identities=22% Similarity=0.331 Sum_probs=57.7
Q ss_pred EEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec---CCHHHHHHHHHhcCcceEE
Q 030348 48 TVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY---VDRNKVLKAVRRAGKRAEF 110 (179)
Q Consensus 48 ~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~---~~~~~i~~~i~~~G~~a~~ 110 (179)
+++++| ||+|.+|+.+|+++|++++||.++++|+.+++++|..+ .+.+++.+++++.||++..
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~ 69 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVD 69 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESS
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCcccc
Confidence 357999 99999999999999999999999999999999999854 6899999999999998753
No 42
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=85.71 E-value=6.4 Score=26.61 Aligned_cols=67 Identities=21% Similarity=0.275 Sum_probs=46.7
Q ss_pred cceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEE-----eCCccEE--EEEec-CCHHHHHHHHHhcCcceEEcc
Q 030348 45 SLQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEV-----ELELEKV--TAVGY-VDRNKVLKAVRRAGKRAEFWP 112 (179)
Q Consensus 45 ~~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~v-----d~~~~~v--~V~g~-~~~~~i~~~i~~~G~~a~~~~ 112 (179)
..+++.|.| .-+-+. .-.+-+.|.+++||..|++ |..+..+ +|.|. ++.++|.++|++.|.-..-+.
T Consensus 5 ~irRlVLDVlKPh~p~-i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~IHSID 80 (97)
T 2raq_A 5 GLIRIVLDILKPHEPI-IPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHSVD 80 (97)
T ss_dssp SEEEEEEEEECCSCSC-HHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEEEE
T ss_pred CceEEEEEecCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEeee
Confidence 456777777 443333 3466777889999887764 4444444 55676 999999999999998765443
No 43
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=85.57 E-value=2.4 Score=28.82 Aligned_cols=67 Identities=19% Similarity=0.236 Sum_probs=46.8
Q ss_pred cceEEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEe-----CCccEE--EEEec-CCHHHHHHHHHhcCcceEEcc
Q 030348 45 SLQTVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVE-----LELEKV--TAVGY-VDRNKVLKAVRRAGKRAEFWP 112 (179)
Q Consensus 45 ~~~~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd-----~~~~~v--~V~g~-~~~~~i~~~i~~~G~~a~~~~ 112 (179)
..+++.|.| ..+-+ -.-.+-+.|.+++||..|++. ..+..+ +|+|. ++.++|.++|++.|.-+.-+.
T Consensus 5 ~iRRlVLDVlKPh~P-~ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvIHSID 80 (100)
T 3bpd_A 5 GLRRLVLDVLKPHEP-KTIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIHSVD 80 (100)
T ss_dssp SEEEEEEEEEEESCS-CHHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEEEE
T ss_pred cceEEEEEecCCCCC-CHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEeee
Confidence 356777777 44333 344667789999999887754 344433 45676 999999999999998766543
No 44
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=83.37 E-value=5.3 Score=26.94 Aligned_cols=66 Identities=20% Similarity=0.282 Sum_probs=45.9
Q ss_pred cceEEEEEE-c-CcChhHHHHHHHHHHcCCCeeEEEEe-----CCccE--EEEEec-CCHHHHHHHHHhcCcceEEc
Q 030348 45 SLQTVELKV-R-MCCTGCERVVKNAIYKLRGVDSVEVE-----LELEK--VTAVGY-VDRNKVLKAVRRAGKRAEFW 111 (179)
Q Consensus 45 ~~~~v~l~V-g-m~C~~C~~kI~~al~~~~GV~~v~vd-----~~~~~--v~V~g~-~~~~~i~~~i~~~G~~a~~~ 111 (179)
..+++.|.| . ++-+.- -.+-+.|.+++||..|++. ..+.. ++|+|. ++.++|.++|++.|.-..-+
T Consensus 3 ~irRlVLDVlKP~h~P~i-vd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~IHSI 78 (96)
T 2x3d_A 3 AIRRLVLDVLKPIRGTSI-VDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAIHSI 78 (96)
T ss_dssp CEEEEEEEEEEESSSSCH-HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEEEEE
T ss_pred ceEEEEEEcccCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence 455667777 3 344433 3567788999999887754 34443 355676 99999999999999866544
No 45
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=76.00 E-value=3.9 Score=27.49 Aligned_cols=35 Identities=31% Similarity=0.641 Sum_probs=26.1
Q ss_pred EEEEEEcCcChhH------HHHHHHHHHcCCCeeEEEEeCC
Q 030348 48 TVELKVRMCCTGC------ERVVKNAIYKLRGVDSVEVELE 82 (179)
Q Consensus 48 ~v~l~Vgm~C~~C------~~kI~~al~~~~GV~~v~vd~~ 82 (179)
.+.+.+-+++.+| ...|+.+|.+++||.+++|++.
T Consensus 42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~ 82 (103)
T 3cq1_A 42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT 82 (103)
T ss_dssp EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEe
Confidence 4556666666666 5678999999999999888743
No 46
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=73.96 E-value=17 Score=24.27 Aligned_cols=55 Identities=15% Similarity=0.161 Sum_probs=40.8
Q ss_pred EEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec--CCHHHHHHHHHhcCcceEEcc
Q 030348 49 VELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY--VDRNKVLKAVRRAGKRAEFWP 112 (179)
Q Consensus 49 v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~i~~~G~~a~~~~ 112 (179)
.++.+ |+.|+.-.-+++++|.+++.- +.+.|..+ ...+.|.+-++..|+.+....
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~G---------e~L~Vl~dd~~a~~dI~~~~~~~G~~v~~~e 84 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKPG---------EILEVWIDYPMSKERIPETVKKLGHEVLEIE 84 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCTT---------CEEEEEESSCTHHHHHHHHHHHSSCCEEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCCC---------CEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 56889 999999999999999987431 23333332 446778888899999886653
No 47
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=71.95 E-value=17 Score=23.27 Aligned_cols=56 Identities=7% Similarity=0.035 Sum_probs=40.8
Q ss_pred EEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEe--cCCHHHHHHHHHhcCcceEEcc
Q 030348 48 TVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVG--YVDRNKVLKAVRRAGKRAEFWP 112 (179)
Q Consensus 48 ~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g--~~~~~~i~~~i~~~G~~a~~~~ 112 (179)
..++.+ |+.|+.-.-+++++|.+++.- +.+.|.. ....+.|..-++..|+++....
T Consensus 10 ~~~lD~rGl~CP~Pvl~~kkal~~l~~G---------~~l~V~~dd~~a~~di~~~~~~~G~~~~~~~ 68 (82)
T 3lvj_C 10 DHTLDALGLRCPEPVMMVRKTVRNMQPG---------ETLLIIADDPATTRDIPGFCTFMEHELVAKE 68 (82)
T ss_dssp SEEEECTTCCTTHHHHHHHHHHHTSCTT---------CEEEEEECCTTHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEECCCCCCCHHHHHHHHHHHhCCCC---------CEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 456889 999999999999999987421 2233332 2455678888899999876653
No 48
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=70.65 E-value=6 Score=26.49 Aligned_cols=35 Identities=37% Similarity=0.530 Sum_probs=24.3
Q ss_pred EEEEEEcCcChhH------HHHHHHHHHcCCCeeEEEEeCC
Q 030348 48 TVELKVRMCCTGC------ERVVKNAIYKLRGVDSVEVELE 82 (179)
Q Consensus 48 ~v~l~Vgm~C~~C------~~kI~~al~~~~GV~~v~vd~~ 82 (179)
.+.+.+-++..+| ...|+.+|.+++||.+++|++.
T Consensus 43 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~ 83 (103)
T 1uwd_A 43 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELT 83 (103)
T ss_dssp EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEEC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEe
Confidence 4555554454444 4568889999999999888743
No 49
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=68.12 E-value=14 Score=24.07 Aligned_cols=53 Identities=21% Similarity=0.266 Sum_probs=39.6
Q ss_pred EEEE-cCcChhHHHHHHHHHHcCC--CeeEEEEeCCccEEEEEec--CCHHHHHHHHHhcCcceEEcc
Q 030348 50 ELKV-RMCCTGCERVVKNAIYKLR--GVDSVEVELELEKVTAVGY--VDRNKVLKAVRRAGKRAEFWP 112 (179)
Q Consensus 50 ~l~V-gm~C~~C~~kI~~al~~~~--GV~~v~vd~~~~~v~V~g~--~~~~~i~~~i~~~G~~a~~~~ 112 (179)
++.+ |+.|+.-.-+++++|.+++ | +.+.|..+ ...+.|..-++..|+.+....
T Consensus 3 ~lD~rGl~CP~Pvl~~kkal~~l~~~G----------~~L~V~~dd~~a~~dI~~~~~~~G~~v~~~~ 60 (87)
T 3hz7_A 3 TIDALGQVCPIPVIRAKKALAELGEAG----------GVVTVLVDNDISRQNLQKMAEGMGYQSEYLE 60 (87)
T ss_dssp EEECTTCCTTHHHHHHHHHHHTTGGGC----------CEEEEEESSHHHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEcCCCCCCHHHHHHHHHHHhccCCC----------CEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 4778 9999999999999999883 3 23333322 456678888899999886653
No 50
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=62.08 E-value=32 Score=22.84 Aligned_cols=44 Identities=7% Similarity=0.111 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec-CCHHHHHHHHH
Q 030348 59 GCERVVKNAIYKLRGVDSVEVELELEKVTAVGY-VDRNKVLKAVR 102 (179)
Q Consensus 59 ~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~-~~~~~i~~~i~ 102 (179)
+=...|.++|.+++||.-..++...+++.|+-. .+.+.+.+.++
T Consensus 17 ~~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~ 61 (95)
T 2jsx_A 17 ERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIE 61 (95)
T ss_dssp TSHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHH
Confidence 446789999999999954445665777776633 45555555553
No 51
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=59.63 E-value=8.1 Score=26.19 Aligned_cols=35 Identities=23% Similarity=0.422 Sum_probs=24.1
Q ss_pred EEEEEcCcChhH------HHHHHHHH-HcCCCeeEEEEeCCc
Q 030348 49 VELKVRMCCTGC------ERVVKNAI-YKLRGVDSVEVELEL 83 (179)
Q Consensus 49 v~l~Vgm~C~~C------~~kI~~al-~~~~GV~~v~vd~~~ 83 (179)
+.+.+-++..+| ...|+.+| .+++||.+++|++..
T Consensus 46 V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~~ 87 (108)
T 3lno_A 46 AVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVVW 87 (108)
T ss_dssp EEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEECC
T ss_pred EEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEEe
Confidence 445554444444 56788899 899999988876543
No 52
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=46.99 E-value=32 Score=22.84 Aligned_cols=55 Identities=16% Similarity=0.060 Sum_probs=38.9
Q ss_pred EEEEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEe--cCCHHHHHHHHHhcCcceEEc
Q 030348 48 TVELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVG--YVDRNKVLKAVRRAGKRAEFW 111 (179)
Q Consensus 48 ~v~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g--~~~~~~i~~~i~~~G~~a~~~ 111 (179)
..++.+ |+.|+.-.-+++++|.+++.- +.+.|.. ....+.|.+-++..|+.+...
T Consensus 27 ~~~LD~rGl~CP~PvlktkkaL~~l~~G---------e~L~Vl~dd~~a~~dIp~~~~~~G~~v~~~ 84 (97)
T 1je3_A 27 DYRLDMVGEPCPYPAVATLEAMPQLKKG---------EILEVVSDCPQSINNIPLDARNHGYTVLDI 84 (97)
T ss_dssp EEEECSBCCSSSSSTHHHHHHTTTCCSS---------CEEEEEEBCSSSSCHHHHHHHHHTCSEEEE
T ss_pred CeEEeCCCCCCCHHHHHHHHHHHcCCCC---------CEEEEEECCcchHHHHHHHHHHCCCEEEEE
Confidence 456888 999999999999999987431 1223322 234556778888999987654
No 53
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=46.45 E-value=83 Score=23.87 Aligned_cols=52 Identities=23% Similarity=0.271 Sum_probs=35.8
Q ss_pred cceEEEEEEcCcChhHHHHHHHHHHcCCCeeEEEEeCCccE-------------------EEEEec---CCHHHHHHHH
Q 030348 45 SLQTVELKVRMCCTGCERVVKNAIYKLRGVDSVEVELELEK-------------------VTAVGY---VDRNKVLKAV 101 (179)
Q Consensus 45 ~~~~v~l~Vgm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~-------------------v~V~g~---~~~~~i~~~i 101 (179)
.++++.|. .+|-.-+|..+.+++||.++.+-...+. |.|..+ ++.++|++..
T Consensus 42 ~~~~a~fa-----gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F 115 (199)
T 1fvg_A 42 GTQMAVFG-----MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVF 115 (199)
T ss_dssp TCEEEEEE-----ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHH
T ss_pred CceEEEEe-----cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHH
Confidence 34555443 5677778888999999999998775543 445543 6677777655
No 54
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=44.74 E-value=41 Score=24.88 Aligned_cols=44 Identities=20% Similarity=0.252 Sum_probs=34.3
Q ss_pred hhHHHHHHHHHHcCCCeeEEEEeCCcc---------------EEEEEec---CCHHHHHHHH
Q 030348 58 TGCERVVKNAIYKLRGVDSVEVELELE---------------KVTAVGY---VDRNKVLKAV 101 (179)
Q Consensus 58 ~~C~~kI~~al~~~~GV~~v~vd~~~~---------------~v~V~g~---~~~~~i~~~i 101 (179)
.||-.-+|..+.+++||.++.+-...+ .|.|..+ ++.++|++..
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F 70 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELF 70 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHH
Confidence 467778899999999999999887654 5566654 7888888865
No 55
>3b1j_C CP12; alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_C*
Probab=43.75 E-value=3.1 Score=21.23 Aligned_cols=10 Identities=20% Similarity=0.351 Sum_probs=8.5
Q ss_pred CCcccCCCCc
Q 030348 166 NMFNDDNVNA 175 (179)
Q Consensus 166 ~~FsDeNPna 175 (179)
..|+||||.|
T Consensus 8 E~yC~enPea 17 (26)
T 3b1j_C 8 GDYCSENPDA 17 (26)
T ss_dssp HHHHHHCTTS
T ss_pred HHHHHHCCCc
Confidence 5789999987
No 56
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=43.47 E-value=93 Score=23.68 Aligned_cols=44 Identities=23% Similarity=0.196 Sum_probs=33.2
Q ss_pred hhHHHHHHHHHHcCCCeeEEEEeCCcc---------------EEEEEec---CCHHHHHHHH
Q 030348 58 TGCERVVKNAIYKLRGVDSVEVELELE---------------KVTAVGY---VDRNKVLKAV 101 (179)
Q Consensus 58 ~~C~~kI~~al~~~~GV~~v~vd~~~~---------------~v~V~g~---~~~~~i~~~i 101 (179)
.+|-.-+|..+.+++||.++.+-...+ .|.|..+ ++.++|++..
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~F 93 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFF 93 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHH
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHH
Confidence 567777888899999999999877543 4556654 6788888765
No 57
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=41.92 E-value=94 Score=23.80 Aligned_cols=44 Identities=20% Similarity=0.185 Sum_probs=32.4
Q ss_pred hhHHHHHHHHHHcCCCeeEEEEeCCcc-------------------EEEEEec---CCHHHHHHHH
Q 030348 58 TGCERVVKNAIYKLRGVDSVEVELELE-------------------KVTAVGY---VDRNKVLKAV 101 (179)
Q Consensus 58 ~~C~~kI~~al~~~~GV~~v~vd~~~~-------------------~v~V~g~---~~~~~i~~~i 101 (179)
.+|-.-+|..+.+++||.++.+-...+ .|.|..+ ++.++|++..
T Consensus 49 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F 114 (211)
T 1ff3_A 49 MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVF 114 (211)
T ss_dssp CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHH
T ss_pred cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHH
Confidence 467777788899999999999877633 3556544 6777777765
No 58
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=32.30 E-value=68 Score=24.22 Aligned_cols=44 Identities=14% Similarity=0.156 Sum_probs=32.7
Q ss_pred hhHHHHHHHHHHcCCCeeEEEEeCCccE-------------------EEEEec---CCHHHHHHHH
Q 030348 58 TGCERVVKNAIYKLRGVDSVEVELELEK-------------------VTAVGY---VDRNKVLKAV 101 (179)
Q Consensus 58 ~~C~~kI~~al~~~~GV~~v~vd~~~~~-------------------v~V~g~---~~~~~i~~~i 101 (179)
.+|-.-++..+.+++||.++.+-...+. |.|..+ ++.++|++..
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f 74 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYF 74 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHH
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHH
Confidence 4677778888999999999998765443 455544 6788888755
No 59
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=32.15 E-value=77 Score=25.11 Aligned_cols=44 Identities=20% Similarity=0.230 Sum_probs=32.8
Q ss_pred hhHHHHHHHHHHcCCCeeEEEEeCCccE-------------------EEEEec---CCHHHHHHHH
Q 030348 58 TGCERVVKNAIYKLRGVDSVEVELELEK-------------------VTAVGY---VDRNKVLKAV 101 (179)
Q Consensus 58 ~~C~~kI~~al~~~~GV~~v~vd~~~~~-------------------v~V~g~---~~~~~i~~~i 101 (179)
.||-.-+|..+.+++||.++.+-...+. |.|..+ ++.++|++..
T Consensus 101 gGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~F 166 (261)
T 2j89_A 101 AGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVL 166 (261)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHH
Confidence 5677778888999999999998775543 555544 6777777754
No 60
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis}
Probab=32.11 E-value=98 Score=20.45 Aligned_cols=40 Identities=18% Similarity=0.323 Sum_probs=29.0
Q ss_pred HHHHHHHcCCCeeEEEEeCCccEEEEE--ecCCHHHHHHHHHhc
Q 030348 63 VVKNAIYKLRGVDSVEVELELEKVTAV--GYVDRNKVLKAVRRA 104 (179)
Q Consensus 63 kI~~al~~~~GV~~v~vd~~~~~v~V~--g~~~~~~i~~~i~~~ 104 (179)
-+-+.|-+++||.+|-+. .+=++|+ ...+++.|...|...
T Consensus 40 PLA~~LF~i~gVk~Vf~g--~dFITVtK~~~~dW~~ikp~I~~~ 81 (94)
T 2k1h_A 40 EFINRLFEIEGVKSIFYV--LDFISIDKEDNANWNELLPQIENT 81 (94)
T ss_dssp HHHHHHHTSTTEEEEEEE--TTEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHHhhCCCCeeEEEEe--CCEEEEecCCCCCHHHHHHHHHHH
Confidence 344555689999988765 6777776 348899988887643
No 61
>2w7v_A General secretion pathway protein L; transport, type II secretion, transport protein; 2.30A {Vibrio parahaemolyticus}
Probab=32.03 E-value=1.1e+02 Score=20.23 Aligned_cols=51 Identities=6% Similarity=-0.017 Sum_probs=35.9
Q ss_pred HHHHHHHcCCCee--EEEEeCCccEEEEEec----CCHHHHHHHHHhcCcceEEccCC
Q 030348 63 VVKNAIYKLRGVD--SVEVELELEKVTAVGY----VDRNKVLKAVRRAGKRAEFWPYP 114 (179)
Q Consensus 63 kI~~al~~~~GV~--~v~vd~~~~~v~V~g~----~~~~~i~~~i~~~G~~a~~~~~~ 114 (179)
.+..+|...+++. +++.|...+.+.+.-. ...+++...+.+ |+.++.-...
T Consensus 16 ~L~~~l~~vp~l~~~sLryD~~R~ELrlq~~A~dF~~~E~lr~~l~~-gf~Ve~Gs~~ 72 (95)
T 2w7v_A 16 ALPATLGQVKDLEITSFKYDGQRGEVRIHARSSDFQPFEQARVKLAE-KFNVEQGQLN 72 (95)
T ss_dssp GHHHHHHTSTTCEEEEEEEETTTTEEEEEEEESSSHHHHHHHHHHHT-TEEEEECCCE
T ss_pred HHHHHhccCCCceEEEEeecCCCCeEEEEEecCCHHHHHHHHHHhhc-CcEEehhhhc
Confidence 4556777888865 6667768888877522 457788888865 9998875443
No 62
>1owx_A Lupus LA protein, SS-B, LA; RRM, transcription; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.89 E-value=1.3e+02 Score=20.77 Aligned_cols=56 Identities=9% Similarity=-0.006 Sum_probs=42.3
Q ss_pred EEEEE-cCcCh-hHHHHHHHHHHcCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhc
Q 030348 49 VELKV-RMCCT-GCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRA 104 (179)
Q Consensus 49 v~l~V-gm~C~-~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~ 104 (179)
+.+.| ++.-. .+...|+..++....|..|++.....+..|.......+..++++++
T Consensus 19 ~il~v~~l~~~~~sredLke~F~~~G~V~~Vd~~~g~~tgfVrf~~~~~~A~~av~~l 76 (121)
T 1owx_A 19 CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFKEKAKEALGKAKDA 76 (121)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEESSCHHHHHHHHHHT
T ss_pred eEEEEecCCCCcCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCChHHHHHHHHHh
Confidence 35778 77777 7799999999999999999988888887787653245555666554
No 63
>3qv1_G CP12 protein; rossman fold, calvin cycle, NAD, chloroplast, oxidoreductase binding complex; HET: NAD; 2.00A {Arabidopsis thaliana} PDB: 3rvd_I*
Probab=30.55 E-value=8.3 Score=25.27 Aligned_cols=14 Identities=21% Similarity=0.401 Sum_probs=11.1
Q ss_pred CCCcccCCCCc--ccc
Q 030348 165 SNMFNDDNVNA--CCL 178 (179)
Q Consensus 165 ~~~FsDeNPna--CsI 178 (179)
.-.|+||||.| |-|
T Consensus 64 lE~yC~~nPea~ECr~ 79 (82)
T 3qv1_G 64 LEEYCKDNPETNECRT 79 (82)
T ss_dssp HHHHHHHCTTSTTTCC
T ss_pred HHHHHHHCCCchHhhh
Confidence 46899999997 654
No 64
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=28.90 E-value=1.3e+02 Score=24.51 Aligned_cols=44 Identities=18% Similarity=0.197 Sum_probs=33.6
Q ss_pred hhHHHHHHHHHHcCCCeeEEEEeCCccE-----------------EEEEec---CCHHHHHHHH
Q 030348 58 TGCERVVKNAIYKLRGVDSVEVELELEK-----------------VTAVGY---VDRNKVLKAV 101 (179)
Q Consensus 58 ~~C~~kI~~al~~~~GV~~v~vd~~~~~-----------------v~V~g~---~~~~~i~~~i 101 (179)
.+|-.-++..+.+++||.++.+-...+. |.|+.+ ++.++|++..
T Consensus 9 gGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f 72 (313)
T 3e0m_A 9 GGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYY 72 (313)
T ss_dssp CSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHH
T ss_pred cCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHH
Confidence 5677778899999999999998776543 556654 7888887755
No 65
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=27.05 E-value=49 Score=16.77 Aligned_cols=14 Identities=21% Similarity=0.491 Sum_probs=11.4
Q ss_pred hHHHHHHHHHHHHH
Q 030348 2 ATLLAKAFRSVISS 15 (179)
Q Consensus 2 ~~~~~~~~~~~~~~ 15 (179)
|.+||.+++..+..
T Consensus 9 A~vIQrA~R~yl~~ 22 (27)
T 2kxw_B 9 AIVIQRAYRRYLLK 22 (27)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 68899999988754
No 66
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=26.68 E-value=36 Score=21.22 Aligned_cols=52 Identities=10% Similarity=0.072 Sum_probs=37.1
Q ss_pred EEEE-cCcChhHHHHHHHHHHcCCCeeEEEEeCCccEEEEEec--CCHHHHHHHHHhcCcceEE
Q 030348 50 ELKV-RMCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGY--VDRNKVLKAVRRAGKRAEF 110 (179)
Q Consensus 50 ~l~V-gm~C~~C~~kI~~al~~~~GV~~v~vd~~~~~v~V~g~--~~~~~i~~~i~~~G~~a~~ 110 (179)
++.+ |+.|+.-.-+++++|.+++.- +.+.|..+ ...+.|..-++..|+....
T Consensus 8 ~lD~rGl~CP~Pvl~~k~al~~l~~G---------~~L~V~~dd~~a~~di~~~~~~~G~~~~~ 62 (78)
T 1pav_A 8 VIDARGSYCPGPLMELIKAYKQAKVG---------EVISVYSTDAGTKKDAPAWIQKSGQELVG 62 (78)
T ss_dssp CCCBSSCSSCTTHHHHHHHHTTSCTT---------CCEECCBSSSCHHHHHHHHHHHHTEEECC
T ss_pred EEECCCCCCCHHHHHHHHHHHcCCCC---------CEEEEEECCccHHHHHHHHHHHCCCEEEE
Confidence 4778 999999999999999987421 22333322 3456788888899987643
No 67
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=25.69 E-value=1.3e+02 Score=22.60 Aligned_cols=36 Identities=14% Similarity=0.116 Sum_probs=24.7
Q ss_pred CcceEEEEEEcCcChhHHHHHHHHHHcC--CCeeEEEEeCCcc
Q 030348 44 LSLQTVELKVRMCCTGCERVVKNAIYKL--RGVDSVEVELELE 84 (179)
Q Consensus 44 ~~~~~v~l~Vgm~C~~C~~kI~~al~~~--~GV~~v~vd~~~~ 84 (179)
..++++.|. .+|-.-+|..+.++ +||.++.+-...+
T Consensus 17 ~~~~~a~fa-----gGCFWg~E~~F~~l~g~GV~~t~~GYagG 54 (187)
T 3pim_A 17 AKDKLITLA-----CGCFWGTEHMYRKYLNDRIVDCKVGYANG 54 (187)
T ss_dssp TTCEEEEEE-----SSCHHHHHHHHHHHHGGGSSEEEEEEEEE
T ss_pred CCCcEEEEe-----cCCchhhHHHHHHhcCCCeEEEEeeecCC
Confidence 344555543 56667777778888 8999888777555
No 68
>2lj9_A CP12 domain-containing protein 2; helix, protein binding, intrinsically disordered protein; NMR {Arabidopsis thaliana}
Probab=25.05 E-value=12 Score=25.41 Aligned_cols=14 Identities=21% Similarity=0.401 Sum_probs=11.0
Q ss_pred CCCcccCCCCc--ccc
Q 030348 165 SNMFNDDNVNA--CCL 178 (179)
Q Consensus 165 ~~~FsDeNPna--CsI 178 (179)
--.|+||||.| |-|
T Consensus 81 lE~yCdeNPea~ECrv 96 (99)
T 2lj9_A 81 LEEYCKDNPETNECRT 96 (99)
T ss_dssp HHHHHHHCTTTTSTTT
T ss_pred HHHHHHHCCCchHHhh
Confidence 45899999987 654
No 69
>1kaf_A Transcription regulatory protein MOTA; escherichia coli, X-RAY crystallography, protein-DNA interactions, structural genomics; 1.60A {Enterobacteria phage T4} SCOP: d.199.1.1
Probab=21.86 E-value=1.9e+02 Score=19.64 Aligned_cols=42 Identities=12% Similarity=0.256 Sum_probs=33.4
Q ss_pred cCCCeeEEEEeCCccEEEEEecCCHHHHHHHHHhcCcceEEcc
Q 030348 70 KLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWP 112 (179)
Q Consensus 70 ~~~GV~~v~vd~~~~~v~V~g~~~~~~i~~~i~~~G~~a~~~~ 112 (179)
+..|+...++. ..+...|.|.--.+++++.+++.|..+..-+
T Consensus 42 Rt~GiRqfEi~-n~G~fRI~gYk~se~~~~~f~slGm~~K~~~ 83 (108)
T 1kaf_A 42 RTNGIRNFEIN-NNGNMRIFGYKMMEHHIQKFTDIGMSCKIAK 83 (108)
T ss_dssp EETTEEEEEEC-TTSEEEEEEESCCHHHHHHHHTTTCEEEECT
T ss_pred ccCceeEEEEe-cCCcEEEEEecCCHHHHHHHHhcCceEEEcC
Confidence 44688888874 6778888888778889999999998776654
Done!