BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>030349
MILCHLQQSSGCLGCFIRPPVNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSA
VQSQGSISSLGTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQV
REPKLNTHCLCLVKKFWLCSWNATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD

High Scoring Gene Products

Symbol, full name Information P value
AT3G15770 protein from Arabidopsis thaliana 2.4e-35
AT1G15350 protein from Arabidopsis thaliana 1.7e-34
AT5G25360 protein from Arabidopsis thaliana 1.8e-25
AT4G32342 protein from Arabidopsis thaliana 5.1e-19
AT3G54880 protein from Arabidopsis thaliana 6.9e-15
AT5G03440 protein from Arabidopsis thaliana 1.0e-13

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030349
        (179 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2093292 - symbol:AT3G15770 "AT3G15770" species...   382  2.4e-35   1
TAIR|locus:2037878 - symbol:AT1G15350 "AT1G15350" species...   374  1.7e-34   1
TAIR|locus:2145442 - symbol:AT5G25360 "AT5G25360" species...   289  1.8e-25   1
TAIR|locus:4515103481 - symbol:AT4G32342 "AT4G32342" spec...   228  5.1e-19   1
TAIR|locus:2082707 - symbol:AT3G54880 "AT3G54880" species...   189  6.9e-15   1
TAIR|locus:2142689 - symbol:AT5G03440 "AT5G03440" species...   178  1.0e-13   1


>TAIR|locus:2093292 [details] [associations]
            symbol:AT3G15770 "AT3G15770" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR
            InterPro:IPR025124 Pfam:PF13259 EMBL:AK317137 IPI:IPI00537573
            RefSeq:NP_188198.3 UniGene:At.38995 PRIDE:B9DGF6
            EnsemblPlants:AT3G15770.1 GeneID:820820 KEGG:ath:AT3G15770
            TAIR:At3g15770 OMA:VASEDFW PhylomeDB:B9DGF6 Genevestigator:Q2V3V5
            Uniprot:B9DGF6
        Length = 162

 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 84/176 (47%), Positives = 111/176 (63%)

Query:    10 SGCLGCFIRPPVNTSAS---NLSKELGVPG--RSAGKRSI--SEDFWTTSTCDMDNSAVQ 62
             S CL CF +    TS     N +K++ V        K S+  SEDFWT +T DM+++A  
Sbjct:     3 SSCLACFDKSKAKTSVDVPLNGTKDVLVEEDWSELRKPSVVASEDFWTNTTLDMESNA-- 60

Query:    63 SQGSISSLGTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVRE 122
               GS+SS+ T NL  D+ G   S++ P+EFVNHG +LWNQTRQ+W+G+K++E+R    RE
Sbjct:    61 -HGSVSSISTTNLTIDSQGCGSSSNEPAEFVNHGLVLWNQTRQQWVGDKRSESRKSVGRE 119

Query:   123 PKLNTHCLCLVKKFWLCSWNATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMY 178
             P LN               N TYESLLGSNK FP+PIPL EMV FLV++WE+EG+Y
Sbjct:   120 PILNE--------------NVTYESLLGSNKRFPRPIPLDEMVQFLVEVWEEEGLY 161


>TAIR|locus:2037878 [details] [associations]
            symbol:AT1G15350 "AT1G15350" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009507 "chloroplast" evidence=ISM] EMBL:CP002684
            InterPro:IPR025124 Pfam:PF13259 HOGENOM:HOG000242312 EMBL:AY088679
            EMBL:AK227364 IPI:IPI00543813 RefSeq:NP_563972.1 RefSeq:NP_849667.1
            UniGene:At.43878 PRIDE:Q8L920 EnsemblPlants:AT1G15350.1
            EnsemblPlants:AT1G15350.2 GeneID:838104 KEGG:ath:AT1G15350
            TAIR:At1g15350 eggNOG:NOG246980 InParanoid:Q8L920 OMA:ARNSNAP
            PhylomeDB:Q8L920 ProtClustDB:CLSN2687812 Genevestigator:Q8L920
            Uniprot:Q8L920
        Length = 154

 Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
 Identities = 85/169 (50%), Positives = 103/169 (60%)

Query:    14 GCF--IRPPVNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSAVQSQGSISSLG 71
             GC    R   +T+AS          R   K S+SEDFW+TST DMDN    SQGS+SS  
Sbjct:     3 GCVGCYREHRSTAASLKDPPSNSIARPCKKPSVSEDFWSTSTVDMDNITFPSQGSLSS-- 60

Query:    72 TNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLNTHCLC 131
              +N   D+   + +++AP E+VN G LLWNQTR+RW+G  K  N     +  KLN     
Sbjct:    61 -SNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVGKDKPNNPVDHNQGAKLN----- 114

Query:   132 LVKKFWLCSWN-ATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD 179
                      WN ATY+SLLGSNK FPQPIPL+EMVDFLVDIWEQEG+YD
Sbjct:   115 ---------WNTATYDSLLGSNKLFPQPIPLTEMVDFLVDIWEQEGLYD 154

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 52/116 (44%), Positives = 69/116 (59%)

Query:    11 GCLGCFIRPPVNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSAVQSQGSISSL 70
             GC+GC+ R   +T+AS          R   K S+SEDFW+TST DMDN    SQGS+SS 
Sbjct:     3 GCVGCY-REHRSTAASLKDPPSNSIARPCKKPSVSEDFWSTSTVDMDNITFPSQGSLSS- 60

Query:    71 GTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLN 126
               +N   D+   + +++AP E+VN G LLWNQTR+RW+G  K  N     +  KLN
Sbjct:    61 --SNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVGKDKPNNPVDHNQGAKLN 114


>TAIR|locus:2145442 [details] [associations]
            symbol:AT5G25360 "AT5G25360" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688
            GenomeReviews:BA000015_GR InterPro:IPR025124 Pfam:PF13259
            eggNOG:NOG303565 HOGENOM:HOG000242312 EMBL:BT005777 EMBL:BT006074
            EMBL:AK228420 IPI:IPI00541827 RefSeq:NP_001190393.1
            RefSeq:NP_197918.1 UniGene:At.30915 EnsemblPlants:AT5G25360.1
            EnsemblPlants:AT5G25360.2 GeneID:832608 KEGG:ath:AT5G25360
            TAIR:At5g25360 InParanoid:Q84JY4 OMA:TISWNAT PhylomeDB:Q84JY4
            ProtClustDB:CLSN2716599 ArrayExpress:Q84JY4 Genevestigator:Q84JY4
            Uniprot:Q84JY4
        Length = 169

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 58/117 (49%), Positives = 77/117 (65%)

Query:    11 GCLGCFIRPPVNTSASNLSKELGVPGRSAGKRSISEDFWTTSTCDMDNSAVQSQGSISSL 70
             GC GC  +PP+  +    SK L + GR   K S+SEDFW+TSTC+MDNS +QSQ S+SS+
Sbjct:    20 GCFGCCNKPPLIVAVDEPSKGLRIQGRLVKKPSVSEDFWSTSTCEMDNSTLQSQRSMSSI 79

Query:    71 G-TNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLN 126
               TNN        S S S P+EFVNHG  LWNQTRQ+W+ N  ++ +  +VREP ++
Sbjct:    80 SFTNN-----TSTSASTSNPTEFVNHGLNLWNQTRQQWLANGTSQKKA-KVREPTIS 130

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 61/116 (52%), Positives = 76/116 (65%)

Query:    66 SISSLGTNNLIPDTNGGSGSASA--PSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREP 123
             ++ S  + + I  TN  S SAS   P+EFVNHG  LWNQTRQ+W+ N  ++ +  +VREP
Sbjct:    69 TLQSQRSMSSISFTNNTSTSASTSNPTEFVNHGLNLWNQTRQQWLANGTSQKKA-KVREP 127

Query:   124 KLNTHCLCLVKKFWLCSWNATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD 179
              +              SWNATYESLLG NK F +PIPL EMVDFLVD+WEQEG+YD
Sbjct:   128 TI--------------SWNATYESLLGMNKRFSRPIPLPEMVDFLVDVWEQEGLYD 169


>TAIR|locus:4515103481 [details] [associations]
            symbol:AT4G32342 "AT4G32342" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161581
            InterPro:IPR025124 Pfam:PF13259 IPI:IPI00891025
            RefSeq:NP_001119095.1 UniGene:At.73468 EnsemblPlants:AT4G32342.1
            GeneID:6241086 KEGG:ath:AT4G32342 TAIR:At4g32342 eggNOG:NOG303565
            HOGENOM:HOG000242312 OMA:LINSINC PhylomeDB:B3H7L0
            Genevestigator:B3H7L0 Uniprot:B3H7L0
        Length = 161

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 50/94 (53%), Positives = 61/94 (64%)

Query:    85 SASAPSEFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLNTHCLCLVKKFWLCSWNAT 144
             S S  +EFVNHG +LWN TRQ+W      E  T Q           CLV +  + SWN+T
Sbjct:    83 STSNSTEFVNHGLILWNHTRQQW-----RECLTRQQ----------CLVPEPAI-SWNST 126

Query:   145 YESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMY 178
             Y+SLL +NK FPQPIPL EMV FLVD+WE+EG+Y
Sbjct:   127 YDSLLSTNKLFPQPIPLKEMVHFLVDVWEEEGLY 160

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 44/105 (41%), Positives = 53/105 (50%)

Query:     6 LQQSSGCLGCFIRPP-VNTSASNLSKELGVPGRSAGKRSIS-EDFWTTSTCDMD-NSAVQ 62
             L  S  C GC  R   +       SK L + G+   K S S +DFW+TSTCDMD N  +Q
Sbjct:    11 LINSINCFGCCNRERRLVVEVDEPSKGLKIQGKIVKKDSASSDDFWSTSTCDMDHNITIQ 70

Query:    63 SQGSISSLGTNNLIPDTNGGSGSASAPSEFVNHGFLLWNQTRQRW 107
             SQ S          P       S S  +EFVNHG +LWN TRQ+W
Sbjct:    71 SQSSNPPFD-----PQC-----STSNSTEFVNHGLILWNHTRQQW 105


>TAIR|locus:2082707 [details] [associations]
            symbol:AT3G54880 "AT3G54880" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL049655
            InterPro:IPR025124 Pfam:PF13259 HOGENOM:HOG000242312 EMBL:BT010630
            EMBL:AK176919 IPI:IPI00544567 PIR:T06732 RefSeq:NP_191048.1
            UniGene:At.21063 IntAct:Q9SV37 STRING:Q9SV37 DNASU:824653
            EnsemblPlants:AT3G54880.1 GeneID:824653 KEGG:ath:AT3G54880
            TAIR:At3g54880 eggNOG:NOG299794 InParanoid:Q9SV37 OMA:MELYTAN
            PhylomeDB:Q9SV37 ProtClustDB:CLSN2915748 ArrayExpress:Q9SV37
            Genevestigator:Q9SV37 Uniprot:Q9SV37
        Length = 112

 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 44/112 (39%), Positives = 63/112 (56%)

Query:    69 SLGTNNLIPDTNGGSGSASAPS-EFVNHGFLLWNQTRQRWIGNKKAENRTHQVREPKLNT 127
             +L  + L+ D      + S  +   VNHG  +W + R++W+G+        Q R+ K NT
Sbjct:    16 TLELSKLVKDEKSSVKTNSENTLTLVNHGAKMWQENREKWVGD--------QSRQRK-NT 66

Query:   128 HCLCLVKKFWLCSWNATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD 179
                    K  + SW+ TYE LL +++PF + IPL EMVDFLVDIW  EG+YD
Sbjct:    67 ------AKDQIISWSTTYEDLLSTHEPFSESIPLPEMVDFLVDIWYDEGLYD 112


>TAIR|locus:2142689 [details] [associations]
            symbol:AT5G03440 "AT5G03440" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR
            InterPro:IPR025124 Pfam:PF13259 HOGENOM:HOG000242312 EMBL:AY087179
            EMBL:BT025576 IPI:IPI00528843 RefSeq:NP_568118.1 RefSeq:NP_974726.1
            UniGene:At.33277 EnsemblPlants:AT5G03440.1
            EnsemblPlants:AT5G03440.2 GeneID:831839 KEGG:ath:AT5G03440
            TAIR:At5g03440 eggNOG:NOG292332 InParanoid:Q8LBJ0 OMA:NRTSEMP
            PhylomeDB:Q8LBJ0 ProtClustDB:CLSN2689431 Genevestigator:Q8LBJ0
            Uniprot:Q8LBJ0
        Length = 98

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 40/103 (38%), Positives = 59/103 (57%)

Query:    79 TNGGSGSASAPSE-FVNHGFLLWNQTRQRWIGNKKAENRTHQVR-EPKLNTHCLCLVKKF 136
             +N  +    +  E FVNH  + W + R++W+G+    NRT ++  EP +           
Sbjct:    12 SNSSNDKEKSSEEIFVNHAEIAWQEMRKKWVGDPS--NRTSEMPDEPVIG---------- 59

Query:   137 WLCSWNATYESLLGSNKPFPQPIPLSEMVDFLVDIWEQEGMYD 179
                 +NATYE LL SN PF +PIPL+EMVDFL DIW  +G+++
Sbjct:    60 ----FNATYEDLLTSNTPFNKPIPLAEMVDFLFDIWHGDGLFE 98


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.131   0.422    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      179       179   0.00089  109 3  11 22  0.45    32
                                                     31  0.39    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  189 KB (2107 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.53u 0.20s 19.73t   Elapsed:  00:00:01
  Total cpu time:  19.53u 0.20s 19.73t   Elapsed:  00:00:01
  Start:  Fri May 10 21:07:08 2013   End:  Fri May 10 21:07:09 2013

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