Query 030352
Match_columns 179
No_of_seqs 30 out of 32
Neff 1.8
Searched_HMMs 13730
Date Mon Mar 25 20:10:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030352.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030352hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1q08a_ a.6.1.3 (A:) Transcrip 66.2 2.8 0.0002 27.5 3.5 33 58-90 38-70 (94)
2 d1qc7a_ a.118.14.1 (A:) FliG { 65.8 3.5 0.00025 27.5 4.0 53 59-116 37-89 (101)
3 d1hdja_ a.2.3.1 (A:) HSP40 {Hu 49.9 5.8 0.00042 24.7 2.8 46 50-95 17-62 (77)
4 d1fioa_ a.47.2.1 (A:) Sso1 {Ba 41.3 23 0.0017 23.1 5.0 29 91-119 39-67 (196)
5 d2d8da1 a.130.1.1 (A:3-82) Cho 41.1 3.5 0.00025 25.9 0.6 18 96-113 3-20 (80)
6 d2jn6a1 a.4.1.19 (A:1-89) Unch 39.4 9.7 0.0007 24.0 2.6 27 91-117 63-89 (89)
7 d2gtvx1 a.130.1.3 (X:1-93) Cho 38.8 4.3 0.00031 26.5 0.8 17 94-110 3-19 (93)
8 d1cpqa_ a.24.3.2 (A:) Cytochro 38.0 2.6 0.00019 28.8 -0.5 46 73-118 66-119 (129)
9 d1ybza1 a.130.1.1 (A:2-75) mon 36.5 6.4 0.00046 24.8 1.3 18 96-113 3-20 (74)
10 d1ecma_ a.130.1.1 (A:) Chorism 35.4 6.3 0.00046 25.0 1.2 18 96-113 3-20 (91)
11 d2j8wa1 a.24.3.2 (A:1-128) Cyt 31.0 5.4 0.00039 27.1 0.3 45 74-118 68-120 (128)
12 d2h9da1 a.130.1.1 (A:1-94) Sal 30.4 8.4 0.00061 25.0 1.2 19 95-113 9-27 (94)
13 d2dara2 g.39.1.3 (A:8-52) PDZ 30.4 5.3 0.00038 24.9 0.1 10 141-150 34-43 (45)
14 d1rzhh2 f.23.10.1 (H:11-35) Ph 28.2 12 0.00089 21.0 1.4 12 133-144 6-17 (26)
15 d1ez3a_ a.47.2.1 (A:) Syntaxin 26.3 60 0.0044 20.9 5.0 35 76-110 41-75 (124)
16 d2d4ca1 a.238.1.1 (A:11-247) E 25.6 59 0.0043 21.7 5.1 44 60-105 3-46 (237)
17 d1fxka_ a.2.5.1 (A:) Prefoldin 25.5 79 0.0058 20.2 7.4 61 63-123 19-94 (107)
18 d1g47a1 g.39.1.3 (A:1-35) Pinc 24.4 7.9 0.00057 23.2 0.1 8 142-149 26-33 (35)
19 d1t06a_ a.118.1.17 (A:) Hypoth 24.3 22 0.0016 26.1 2.7 19 78-96 3-21 (235)
20 d1u5sb1 g.39.1.3 (B:72-102) Pi 22.7 9.1 0.00066 22.3 0.1 9 142-150 22-30 (31)
21 d1fpoa1 a.2.3.1 (A:1-76) HSC20 21.9 30 0.0022 20.9 2.6 22 74-95 47-68 (76)
22 d1j1ja_ a.118.16.1 (A:) Transl 21.3 1.3E+02 0.0097 21.3 7.0 39 44-83 5-43 (217)
23 d1q06a_ a.6.1.3 (A:) Transcrip 21.2 44 0.0032 21.6 3.5 28 60-87 80-107 (127)
24 d2f7fa1 c.1.17.1 (A:141-485) P 20.0 16 0.0012 29.1 1.1 21 58-78 294-314 (345)
No 1
>d1q08a_ a.6.1.3 (A:) Transcriptional regulator ZntR {Escherichia coli [TaxId: 562]}
Probab=66.24 E-value=2.8 Score=27.48 Aligned_cols=33 Identities=30% Similarity=0.416 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhchhHHHHhhHHHHHHHHHhccc
Q 030352 58 LEVREKVQAHLGRVEEETKRLATIREELEALAD 90 (179)
Q Consensus 58 mEVReKVqaqLGRvEEETKRLA~IREELE~laD 90 (179)
-+|+.-+..+|..+++-...|..++.+|..|.|
T Consensus 38 ~~v~~l~~~kl~~i~~kI~~L~~l~~~L~~l~~ 70 (94)
T d1q08a_ 38 QESKGIVQERLQEVEARIAELQSMQRSLQRLND 70 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457777888888888888888889988887654
No 2
>d1qc7a_ a.118.14.1 (A:) FliG {Thermotoga maritima [TaxId: 2336]}
Probab=65.82 E-value=3.5 Score=27.54 Aligned_cols=53 Identities=25% Similarity=0.418 Sum_probs=41.2
Q ss_pred HHHHHHHHHhchhHHHHhhHHHHHHHHHhccchhHHHHHHHHHHhhhhhcccccchhh
Q 030352 59 EVREKVQAHLGRVEEETKRLATIREELEALADPMRKEVAVVRKKIDSVNKELKPLGHT 116 (179)
Q Consensus 59 EVReKVqaqLGRvEEETKRLA~IREELE~laDPmRKEVa~VRKKID~vNReLKPLGqs 116 (179)
+++++|..-+.. |.=+.|++|++.++....+||...||.|=.+=|+|---|..
T Consensus 37 ~~~~~il~nms~-----R~~~~l~ee~~~~g~v~~~dve~Aq~~Iv~~~r~l~~~G~I 89 (101)
T d1qc7a_ 37 ELKEKIFKNMSK-----RAAALLKDELEYMGPVRLKDVEEAQQKIINIIRRLEEAGEI 89 (101)
T ss_dssp HHHHHHHTTSCH-----HHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhcCH-----HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCE
Confidence 478888777642 33356899999999999999999999998887777555543
No 3
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.91 E-value=5.8 Score=24.72 Aligned_cols=46 Identities=20% Similarity=0.362 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHhchhHHHHhhHHHHHHHHHhccchhHHH
Q 030352 50 EEEIEKKKLEVREKVQAHLGRVEEETKRLATIREELEALADPMRKE 95 (179)
Q Consensus 50 EEEIERKKmEVReKVqaqLGRvEEETKRLA~IREELE~laDPmRKE 95 (179)
.+||.+.=...--+.+-.....++...+...|.+--+.|+||.++.
T Consensus 17 ~~eIk~ay~~l~~~~hPD~~~~~~~~~~~~~i~~Ay~vLsdp~~R~ 62 (77)
T d1hdja_ 17 DEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKRE 62 (77)
T ss_dssp HHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHhcCHHHHH
Confidence 3445443333333333333345556677888999999999998764
No 4
>d1fioa_ a.47.2.1 (A:) Sso1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=41.26 E-value=23 Score=23.07 Aligned_cols=29 Identities=10% Similarity=0.178 Sum_probs=15.6
Q ss_pred hhHHHHHHHHHHhhhhhcccccchhhhhh
Q 030352 91 PMRKEVAVVRKKIDSVNKELKPLGHTCQK 119 (179)
Q Consensus 91 PmRKEVa~VRKKID~vNReLKPLGqsCQK 119 (179)
+...+...++.+|+.+..++.-+.+.|..
T Consensus 39 ~~~~~~~~~~~~i~~~~~~~~~~~~~~k~ 67 (196)
T d1fioa_ 39 VNEEQASHLRHSLDNFVAQATDLQFKLKN 67 (196)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455556666555555555555543
No 5
>d2d8da1 a.130.1.1 (A:3-82) Chorismate mutase domain of P-protein {Thermus thermophilus [TaxId: 274]}
Probab=41.12 E-value=3.5 Score=25.90 Aligned_cols=18 Identities=39% Similarity=0.719 Sum_probs=14.1
Q ss_pred HHHHHHHhhhhhcccccc
Q 030352 96 VAVVRKKIDSVNKELKPL 113 (179)
Q Consensus 96 Va~VRKKID~vNReLKPL 113 (179)
++.+|++||.++++|-.|
T Consensus 3 L~~lR~~ID~iD~~i~~L 20 (80)
T d2d8da1 3 IQALRKEVDRVNREILRL 20 (80)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 467888899988887654
No 6
>d2jn6a1 a.4.1.19 (A:1-89) Uncharacterized protein Cgl2762 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=39.44 E-value=9.7 Score=23.99 Aligned_cols=27 Identities=7% Similarity=0.201 Sum_probs=22.5
Q ss_pred hhHHHHHHHHHHhhhhhcccccchhhh
Q 030352 91 PMRKEVAVVRKKIDSVNKELKPLGHTC 117 (179)
Q Consensus 91 PmRKEVa~VRKKID~vNReLKPLGqsC 117 (179)
|.++|+..+|+-.+.+.++..=++++|
T Consensus 63 ~~~~ei~~L~~En~~Lk~~~~~~a~~c 89 (89)
T d2jn6a1 63 SEAEQIRQLKKENALQRARTRHPAESC 89 (89)
T ss_dssp HTHHHHHHHHHCGGGGGGTTSCCCGGG
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 456788888888888888888888888
No 7
>d2gtvx1 a.130.1.3 (X:1-93) Chorismate mutase-like protein MJ0246 {Methanococcus jannaschii [TaxId: 2190]}
Probab=38.83 E-value=4.3 Score=26.55 Aligned_cols=17 Identities=35% Similarity=0.743 Sum_probs=15.1
Q ss_pred HHHHHHHHHhhhhhccc
Q 030352 94 KEVAVVRKKIDSVNKEL 110 (179)
Q Consensus 94 KEVa~VRKKID~vNReL 110 (179)
++++.+|++||.++.+|
T Consensus 3 ~~L~~lR~~Id~iD~~i 19 (93)
T d2gtvx1 3 EKLAEIRKKIDEIDNKI 19 (93)
T ss_dssp THHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 57888999999999988
No 8
>d1cpqa_ a.24.3.2 (A:) Cytochrome c' {Rhodobacter capsulatus [TaxId: 1061]}
Probab=37.98 E-value=2.6 Score=28.75 Aligned_cols=46 Identities=22% Similarity=0.364 Sum_probs=35.7
Q ss_pred HHHhhHHHHHHHHHhc---cchhHHHHHHHHHHh-----hhhhcccccchhhhh
Q 030352 73 EETKRLATIREELEAL---ADPMRKEVAVVRKKI-----DSVNKELKPLGHTCQ 118 (179)
Q Consensus 73 EETKRLA~IREELE~l---aDPmRKEVa~VRKKI-----D~vNReLKPLGqsCQ 118 (179)
-.|+-+..||++-+.| ++-+...++.+-.-. +.+...+++||+||-
T Consensus 66 ~~s~A~~~IW~d~~~F~~~~~~~~~aa~~L~~aa~~~d~~~~~~a~~~l~~sCk 119 (129)
T d1cpqa_ 66 GQTEAKAAIWANMDDFGAKGKAMHEAGGAVIAAANAGDGAAFGAALQKLGGTCK 119 (129)
T ss_dssp TTCCBCTHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhHH
Confidence 4688889999987776 777887777776654 447778999999994
No 9
>d1ybza1 a.130.1.1 (A:2-75) mono-domain chorismate mutase {Pyrococcus furiosus [TaxId: 2261]}
Probab=36.46 E-value=6.4 Score=24.80 Aligned_cols=18 Identities=28% Similarity=0.663 Sum_probs=13.9
Q ss_pred HHHHHHHhhhhhcccccc
Q 030352 96 VAVVRKKIDSVNKELKPL 113 (179)
Q Consensus 96 Va~VRKKID~vNReLKPL 113 (179)
.+.+|++||.++++|--|
T Consensus 3 L~~lR~~ID~iD~~i~~L 20 (74)
T d1ybza1 3 LKLLRKEIDKIDNQIISL 20 (74)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 467888999998887544
No 10
>d1ecma_ a.130.1.1 (A:) Chorismate mutase domain of P-protein {Escherichia coli [TaxId: 562]}
Probab=35.42 E-value=6.3 Score=25.04 Aligned_cols=18 Identities=28% Similarity=0.553 Sum_probs=13.2
Q ss_pred HHHHHHHhhhhhcccccc
Q 030352 96 VAVVRKKIDSVNKELKPL 113 (179)
Q Consensus 96 Va~VRKKID~vNReLKPL 113 (179)
+..+|++||.++++|--|
T Consensus 3 L~~lR~~ID~iD~~i~~L 20 (91)
T d1ecma_ 3 LLALREKISALDEKLLAL 20 (91)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 456788888888877544
No 11
>d2j8wa1 a.24.3.2 (A:1-128) Cytochrome c' {Rhodocyclus gelatinosus [TaxId: 28068]}
Probab=31.00 E-value=5.4 Score=27.10 Aligned_cols=45 Identities=13% Similarity=0.284 Sum_probs=32.8
Q ss_pred HHhhHHHHHHHHHhc---cchhHHHHHHHHHH-----hhhhhcccccchhhhh
Q 030352 74 ETKRLATIREELEAL---ADPMRKEVAVVRKK-----IDSVNKELKPLGHTCQ 118 (179)
Q Consensus 74 ETKRLA~IREELE~l---aDPmRKEVa~VRKK-----ID~vNReLKPLGqsCQ 118 (179)
.|+-+..||++-+.+ ++-+.+.+..+..- .|.+...+.+||+||-
T Consensus 68 ~t~A~p~IW~d~~~F~~~~~~~~~aa~~L~~aa~~~d~~~~~~a~~~lg~tCk 120 (128)
T d2j8wa1 68 GTEAKPAVWSDAAGFKAAADKFAAAVDKLDAAGKTGDFAQIKAAVGETGGACK 120 (128)
T ss_dssp TCCBCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 478888999876655 66777777655332 4567888999999994
No 12
>d2h9da1 a.130.1.1 (A:1-94) Salicylate biosynthesis protein PchB {Pseudomonas aeruginosa [TaxId: 287]}
Probab=30.45 E-value=8.4 Score=24.99 Aligned_cols=19 Identities=21% Similarity=0.408 Sum_probs=14.9
Q ss_pred HHHHHHHHhhhhhcccccc
Q 030352 95 EVAVVRKKIDSVNKELKPL 113 (179)
Q Consensus 95 EVa~VRKKID~vNReLKPL 113 (179)
..+.+|++||.++.+|=.|
T Consensus 9 ~L~~lR~~ID~ID~~i~~L 27 (94)
T d2h9da1 9 GLADIREAIDRIDLDIVQA 27 (94)
T ss_dssp SHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4778899999999887544
No 13
>d2dara2 g.39.1.3 (A:8-52) PDZ and LIM domain protein 5, Enigma {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.36 E-value=5.3 Score=24.88 Aligned_cols=10 Identities=50% Similarity=1.232 Sum_probs=8.2
Q ss_pred Hhhccccccc
Q 030352 141 FSLGQLWHPM 150 (179)
Q Consensus 141 ~~~~~~~~~~ 150 (179)
-+||+.|||-
T Consensus 34 tAlgk~WHPE 43 (45)
T d2dara2 34 VALGKSWHPE 43 (45)
T ss_dssp EETTEEECTT
T ss_pred eecCCccCcC
Confidence 4789999994
No 14
>d1rzhh2 f.23.10.1 (H:11-35) Photosystem II reaction centre subunit H, transmembrane region {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=28.15 E-value=12 Score=21.04 Aligned_cols=12 Identities=25% Similarity=0.639 Sum_probs=9.1
Q ss_pred hhHHHHHHHhhc
Q 030352 133 TIHVYWFFFSLG 144 (179)
Q Consensus 133 ~~~~~~~~~~~~ 144 (179)
.|-.+|.||.+-
T Consensus 6 aiw~fw~ffall 17 (26)
T d1rzhh2 6 AIYSFWIFLAGL 17 (26)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 467899999863
No 15
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=26.25 E-value=60 Score=20.89 Aligned_cols=35 Identities=29% Similarity=0.456 Sum_probs=29.1
Q ss_pred hhHHHHHHHHHhccchhHHHHHHHHHHhhhhhccc
Q 030352 76 KRLATIREELEALADPMRKEVAVVRKKIDSVNKEL 110 (179)
Q Consensus 76 KRLA~IREELE~laDPmRKEVa~VRKKID~vNReL 110 (179)
.....++.+|+.+.+...+-...|+.+|+.+.+.+
T Consensus 41 ~~~~~~~~~l~~~~~~i~~~a~~ik~~Lk~l~~~~ 75 (124)
T d1ez3a_ 41 NPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSI 75 (124)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456889999999999999999999999887654
No 16
>d2d4ca1 a.238.1.1 (A:11-247) Endophilin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.64 E-value=59 Score=21.69 Aligned_cols=44 Identities=27% Similarity=0.277 Sum_probs=35.2
Q ss_pred HHHHHHHHhchhHHHHhhHHHHHHHHHhccchhHHHHHHHHHHhhh
Q 030352 60 VREKVQAHLGRVEEETKRLATIREELEALADPMRKEVAVVRKKIDS 105 (179)
Q Consensus 60 VReKVqaqLGRvEEETKRLA~IREELE~laDPmRKEVa~VRKKID~ 105 (179)
+..+|...||++|. |. |..--++||.=.|-+++....+-|.+-.
T Consensus 3 ~~q~~~ek~G~~e~-T~-ld~~f~~lEk~~~~~~~~~~kl~k~~~~ 46 (237)
T d2d4ca1 3 ATQKVSEKVGGAEG-TK-LDDDFKEMERKVDVTSRAVMEIMTKTIE 46 (237)
T ss_dssp HHHHHHHHHTSHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHhHcCCCCc-CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56788899999854 55 8888888998889999888888887744
No 17
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=25.49 E-value=79 Score=20.21 Aligned_cols=61 Identities=18% Similarity=0.241 Sum_probs=42.8
Q ss_pred HHHHHhchhHHHHhhHHHHHHHHHhccch--------------hHHH-HHHHHHHhhhhhcccccchhhhhhhhhh
Q 030352 63 KVQAHLGRVEEETKRLATIREELEALADP--------------MRKE-VAVVRKKIDSVNKELKPLGHTCQKKVKF 123 (179)
Q Consensus 63 KVqaqLGRvEEETKRLA~IREELE~laDP--------------mRKE-Va~VRKKID~vNReLKPLGqsCQKKEke 123 (179)
.+.+++.-+|-+........+||+.+-|- ...| +..|-++++..+.+++-|.......+++
T Consensus 19 ~~~~q~~~le~q~~E~~~vl~eL~~l~~d~~vyk~vG~vLv~~~~~e~~~~l~~~~e~l~~~i~~l~~q~~~l~~~ 94 (107)
T d1fxka_ 19 AISVQKQTVEMQINETQKALEELSRAADDAEVYKSSGNILIRVAKDELTEELQEKLETLQLREKTIERQEERVMKK 94 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCTTCCEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcccHHHHHhcchhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677777777777777788888877542 1223 3456788888888888888777766654
No 18
>d1g47a1 g.39.1.3 (A:1-35) Pinch (particularly interesting new Cys-His) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.39 E-value=7.9 Score=23.16 Aligned_cols=8 Identities=50% Similarity=0.879 Sum_probs=6.6
Q ss_pred hhcccccc
Q 030352 142 SLGQLWHP 149 (179)
Q Consensus 142 ~~~~~~~~ 149 (179)
|-|+|||+
T Consensus 26 SnGEl~H~ 33 (35)
T d1g47a1 26 SNGELYHE 33 (35)
T ss_dssp ETTEEECT
T ss_pred CCCccccc
Confidence 67899997
No 19
>d1t06a_ a.118.1.17 (A:) Hypothetical protein BC3264 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}
Probab=24.32 E-value=22 Score=26.12 Aligned_cols=19 Identities=37% Similarity=0.543 Sum_probs=15.2
Q ss_pred HHHHHHHHHhccchhHHHH
Q 030352 78 LATIREELEALADPMRKEV 96 (179)
Q Consensus 78 LA~IREELE~laDPmRKEV 96 (179)
+.+|.+||++||||--+.+
T Consensus 3 ~e~i~~eL~~l~~~~~~~~ 21 (235)
T d1t06a_ 3 FKTVMQELEALGKERTKKI 21 (235)
T ss_dssp HHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHH
Confidence 5789999999999954433
No 20
>d1u5sb1 g.39.1.3 (B:72-102) Pinch (particularly interesting new Cys-His) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.65 E-value=9.1 Score=22.27 Aligned_cols=9 Identities=33% Similarity=0.992 Sum_probs=7.4
Q ss_pred hhccccccc
Q 030352 142 SLGQLWHPM 150 (179)
Q Consensus 142 ~~~~~~~~~ 150 (179)
+||+-|||-
T Consensus 22 Algk~WHpE 30 (31)
T d1u5sb1 22 AMGKQWHVE 30 (31)
T ss_dssp CTTSBEETT
T ss_pred hhccccCCC
Confidence 689999983
No 21
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}
Probab=21.87 E-value=30 Score=20.94 Aligned_cols=22 Identities=23% Similarity=0.434 Sum_probs=17.9
Q ss_pred HHhhHHHHHHHHHhccchhHHH
Q 030352 74 ETKRLATIREELEALADPMRKE 95 (179)
Q Consensus 74 ETKRLA~IREELE~laDPmRKE 95 (179)
...+.+.|-+--+.|+||.++-
T Consensus 47 a~~~~~~i~~Ay~vL~dp~~R~ 68 (76)
T d1fpoa1 47 AVQQSATINQAWQTLRHPLMRA 68 (76)
T ss_dssp HHHHHHHHHHHHHHHHSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHH
Confidence 4567778889999999998764
No 22
>d1j1ja_ a.118.16.1 (A:) Translin {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.30 E-value=1.3e+02 Score=21.27 Aligned_cols=39 Identities=13% Similarity=0.313 Sum_probs=30.2
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhchhHHHHhhHHHHHH
Q 030352 44 TTFRAKEEEIEKKKLEVREKVQAHLGRVEEETKRLATIRE 83 (179)
Q Consensus 44 S~FrAKEEEIERKKmEVReKVqaqLGRvEEETKRLA~IRE 83 (179)
.+|..=.++++. +-++||++..---.++..+|+.-+.-.
T Consensus 5 ~~F~~~~~~Ld~-~~d~RE~lik~sRdI~~~sk~~I~~Lh 43 (217)
T d1j1ja_ 5 EIFVELQGFLAA-EQDIREEIRKVVQSLEQTAREILTLLQ 43 (217)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 366666677764 568899999988889999998877654
No 23
>d1q06a_ a.6.1.3 (A:) Transcriptional regulator CueR {Escherichia coli [TaxId: 562]}
Probab=21.21 E-value=44 Score=21.60 Aligned_cols=28 Identities=21% Similarity=0.476 Sum_probs=14.7
Q ss_pred HHHHHHHHhchhHHHHhhHHHHHHHHHh
Q 030352 60 VREKVQAHLGRVEEETKRLATIREELEA 87 (179)
Q Consensus 60 VReKVqaqLGRvEEETKRLA~IREELE~ 87 (179)
+.+.+..++..+++.-.+|...+++|..
T Consensus 80 ~~~~l~~~~~~l~~~i~~l~~~~~~l~~ 107 (127)
T d1q06a_ 80 VKRRTLEKVAEIERHIEELQSMRDQLLA 107 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555555555555555544
No 24
>d2f7fa1 c.1.17.1 (A:141-485) Putative nicotinate phosphoribosyltransferase EF2626 {Enterococcus faecalis [TaxId: 1351]}
Probab=20.00 E-value=16 Score=29.08 Aligned_cols=21 Identities=29% Similarity=0.368 Sum_probs=18.6
Q ss_pred HHHHHHHHHHhchhHHHHhhH
Q 030352 58 LEVREKVQAHLGRVEEETKRL 78 (179)
Q Consensus 58 mEVReKVqaqLGRvEEETKRL 78 (179)
.|+|+++++||.++-++.+||
T Consensus 294 ~eiR~r~~~~l~~l~~~~~rl 314 (345)
T d2f7fa1 294 DEIKQYAKENLDSLHEEYKRD 314 (345)
T ss_dssp HHHHHHHHHHHHHSCHHHHCS
T ss_pred HHHHHHHHHHHHhCCHHHhcc
Confidence 489999999999999998776
Done!