Query 030355
Match_columns 179
No_of_seqs 31 out of 33
Neff 3.1
Searched_HMMs 13730
Date Mon Mar 25 20:15:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030355.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030355hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1nb5i_ d.17.1.2 (I:) Cystatin 57.2 3.1 0.00022 29.4 2.6 33 4-43 1-33 (98)
2 d1stfi_ d.17.1.2 (I:) Cystatin 47.3 3.6 0.00026 28.9 1.6 33 4-43 1-33 (98)
3 d1s0pa_ a.192.1.1 (A:) N-termi 30.7 2.7 0.0002 32.1 -1.5 19 105-123 147-165 (176)
4 d1jqia2 e.6.1.1 (A:4-234) Buty 17.4 43 0.0031 23.8 3.0 23 20-43 6-29 (231)
5 d1jila_ c.26.1.1 (A:) Tyrosyl- 17.4 52 0.0038 26.2 3.8 40 2-41 66-110 (323)
6 d2foka1 a.4.5.12 (A:5-143) Res 17.0 25 0.0018 26.1 1.6 17 121-137 113-129 (139)
7 d1ie9a_ a.123.1.1 (A:) Vitamin 16.4 79 0.0058 23.3 4.5 24 20-43 6-29 (255)
8 d1zfoa_ g.39.1.4 (A:) LASP-1 { 16.2 23 0.0017 20.2 0.9 12 108-119 17-28 (30)
9 d2i9wa2 g.74.1.1 (A:1-39) Hypo 15.4 25 0.0018 20.9 1.0 12 147-158 8-19 (39)
10 d1iwpg_ a.23.2.1 (G:) Diol deh 14.9 46 0.0034 24.5 2.6 25 11-39 90-114 (138)
No 1
>d1nb5i_ d.17.1.2 (I:) Cystatin A (stefin A) {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.16 E-value=3.1 Score=29.40 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=25.7
Q ss_pred ecccceeecCCCCcccccCHHHHHHHHHHHHHhhhhcCCC
Q 030355 4 AGVDQWTVTKPSRSDEVLDAVEQVRIANQVRAQIDSMAPK 43 (179)
Q Consensus 4 ~~vg~m~~~kPsRSDe~L~~Eeq~~i~~qvRa~FD~~APK 43 (179)
||.|+|.-.||. .+|-++|.++||.++++=+.+
T Consensus 1 mm~GG~s~~~~a-------t~Eiq~I~d~Vk~~le~k~g~ 33 (98)
T d1nb5i_ 1 MIPGGLSEAKPA-------TPEIQEIVDKVKPQLEEKTNE 33 (98)
T ss_dssp CCTTSCCCCEEC-------CHHHHHHHHHHHHHHHHHHCC
T ss_pred CccCCCCCCCCC-------CHHHHHHHHHHHHHHHHhcCC
Confidence 799999866654 256678999999999985554
No 2
>d1stfi_ d.17.1.2 (I:) Cystatin B (stefin B) {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.31 E-value=3.6 Score=28.89 Aligned_cols=33 Identities=30% Similarity=0.355 Sum_probs=26.0
Q ss_pred ecccceeecCCCCcccccCHHHHHHHHHHHHHhhhhcCCC
Q 030355 4 AGVDQWTVTKPSRSDEVLDAVEQVRIANQVRAQIDSMAPK 43 (179)
Q Consensus 4 ~~vg~m~~~kPsRSDe~L~~Eeq~~i~~qvRa~FD~~APK 43 (179)
||.|.|.-.||. .+|-++|.++||.+++.-+.+
T Consensus 1 mm~GG~s~~~~a-------t~Eiq~i~d~Vk~~~e~k~~~ 33 (98)
T d1stfi_ 1 MMSGAPSATQPA-------TAETQHIADQVRSQLEEKYNK 33 (98)
T ss_dssp CCBSCCCCCEEC-------CHHHHHHHHTTHHHHHHHHTC
T ss_pred CcCCCCCCCCCC-------CHHHHHHHHHHHHHHHHHcCC
Confidence 789999866554 257789999999999986654
No 3
>d1s0pa_ a.192.1.1 (A:) N-terminal domain of adenylylcyclase associated protein, CAP {Dictyostelium discoideum [TaxId: 44689]}
Probab=30.75 E-value=2.7 Score=32.08 Aligned_cols=19 Identities=32% Similarity=0.443 Sum_probs=14.4
Q ss_pred hhcccccccCcCCCCCccc
Q 030355 105 YYNQLVSIDKDHHTTGTGF 123 (179)
Q Consensus 105 YYkdL~~IDKqHHTTGtGF 123 (179)
.+++|-.-=|+|||||--+
T Consensus 147 ~l~~L~~YVkehhttGl~W 165 (176)
T d1s0pa_ 147 FLKDLEKYIKQYHTTGLTW 165 (176)
T ss_dssp HHHHHHHHHHHHSTTSCCC
T ss_pred HHHHHHHHHHHhCCCCCcc
Confidence 3566666779999999654
No 4
>d1jqia2 e.6.1.1 (A:4-234) Butyryl-CoA dehydrogenase, NM domains {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=17.37 E-value=43 Score=23.79 Aligned_cols=23 Identities=13% Similarity=0.183 Sum_probs=18.1
Q ss_pred ccCHHHHHHHHHHHHHhhhh-cCCC
Q 030355 20 VLDAVEQVRIANQVRAQIDS-MAPK 43 (179)
Q Consensus 20 ~L~~Eeq~~i~~qvRa~FD~-~APK 43 (179)
-|+ |||..+.+.+|+|.+. ++|.
T Consensus 6 ~L~-ee~~~l~~~~r~f~~~~i~p~ 29 (231)
T d1jqia2 6 ELP-ETHQMLRQTCRDFAEKELVPI 29 (231)
T ss_dssp CCC-HHHHHHHHHHHHHHHHHTTTT
T ss_pred CCC-HHHHHHHHHHHHHHHHhChHH
Confidence 456 7788899999999996 5553
No 5
>d1jila_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Staphylococcus aureus [TaxId: 1280]}
Probab=17.37 E-value=52 Score=26.18 Aligned_cols=40 Identities=15% Similarity=0.176 Sum_probs=30.1
Q ss_pred eeeccccee--ecCCC-Ccccc--cCHHHHHHHHHHHHHhhhhcC
Q 030355 2 VLAGVDQWT--VTKPS-RSDEV--LDAVEQVRIANQVRAQIDSMA 41 (179)
Q Consensus 2 ~~~~vg~m~--~~kPs-RSDe~--L~~Eeq~~i~~qvRa~FD~~A 41 (179)
+++.+|++| +.-|+ |+.+. |+.|+-....+-++.+|..+-
T Consensus 66 ~i~LiG~~T~~iGDPsgk~~~R~~l~~~~i~~n~~~~~~~~~~~~ 110 (323)
T d1jila_ 66 PIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIF 110 (323)
T ss_dssp EEEEECTTGGGTCCCTTCSSCCCCCCHHHHHHHHHHHHHHHHHHS
T ss_pred eEEeehhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhhhhhh
Confidence 456678876 77887 77665 888888887888888887764
No 6
>d2foka1 a.4.5.12 (A:5-143) Restriction endonuclease FokI, N-terminal (recognition) domain {Flavobacterium okeanokoites [TaxId: 244]}
Probab=16.97 E-value=25 Score=26.08 Aligned_cols=17 Identities=29% Similarity=0.522 Sum_probs=14.9
Q ss_pred ccceEEeecCCceeEee
Q 030355 121 TGFIRVANEGNGYNIRV 137 (179)
Q Consensus 121 tGFIKv~k~~~~f~i~~ 137 (179)
-||||+.+++..|.|+.
T Consensus 113 lgfik~~~~~dtF~ITe 129 (139)
T d2foka1 113 LGFIEYINKSDSFVITD 129 (139)
T ss_dssp TTSEEEETTTTEEEECH
T ss_pred cCeeEEecCCCeEEEeH
Confidence 58999999889999864
No 7
>d1ie9a_ a.123.1.1 (A:) Vitamin D nuclear receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.42 E-value=79 Score=23.29 Aligned_cols=24 Identities=25% Similarity=0.210 Sum_probs=20.5
Q ss_pred ccCHHHHHHHHHHHHHhhhhcCCC
Q 030355 20 VLDAVEQVRIANQVRAQIDSMAPK 43 (179)
Q Consensus 20 ~L~~Eeq~~i~~qvRa~FD~~APK 43 (179)
-|++|||.-|+.=++||-+-.-|-
T Consensus 6 ~lt~eq~~lI~~l~~Ah~~t~~~~ 29 (255)
T d1ie9a_ 6 KLSEEQQRIIAILLDAHHKTYDPT 29 (255)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCCTT
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCC
Confidence 488999999999999998877663
No 8
>d1zfoa_ g.39.1.4 (A:) LASP-1 {Pig (Sus scrofa) [TaxId: 9823]}
Probab=16.21 E-value=23 Score=20.19 Aligned_cols=12 Identities=25% Similarity=0.371 Sum_probs=9.8
Q ss_pred ccccccCcCCCC
Q 030355 108 QLVSIDKDHHTT 119 (179)
Q Consensus 108 dL~~IDKqHHTT 119 (179)
.|+||||--|-+
T Consensus 17 kl~ClDk~WHK~ 28 (30)
T d1zfoa_ 17 KVNCLDKFWHKA 28 (30)
T ss_dssp CCCSSSSCCCGG
T ss_pred HhhhhHHHHhhc
Confidence 699999988753
No 9
>d2i9wa2 g.74.1.1 (A:1-39) Hypothetical protein Psyc2064 {Psychrobacter arcticus [TaxId: 334543]}
Probab=15.39 E-value=25 Score=20.93 Aligned_cols=12 Identities=33% Similarity=0.216 Sum_probs=9.9
Q ss_pred CccccCCCCCCC
Q 030355 147 PVYKSNPATNDW 158 (179)
Q Consensus 147 ~~~ksNPATNDW 158 (179)
-.|..|||.||-
T Consensus 8 cpcq~np~~~~i 19 (39)
T d2i9wa2 8 CPCQINPALNAV 19 (39)
T ss_dssp CGGGCCTTCCCS
T ss_pred cccccCcccccc
Confidence 469999999984
No 10
>d1iwpg_ a.23.2.1 (G:) Diol dehydratase, gamma subunit {Klebsiella pneumoniae [TaxId: 573]}
Probab=14.92 E-value=46 Score=24.53 Aligned_cols=25 Identities=24% Similarity=0.377 Sum_probs=20.9
Q ss_pred ecCCCCcccccCHHHHHHHHHHHHHhhhh
Q 030355 11 VTKPSRSDEVLDAVEQVRIANQVRAQIDS 39 (179)
Q Consensus 11 ~~kPsRSDe~L~~Eeq~~i~~qvRa~FD~ 39 (179)
.-||.|| +.+|-..|+.+++..|.+
T Consensus 90 aLRP~RS----tk~ELl~iA~eL~~~Y~A 114 (138)
T d1iwpg_ 90 ALRPFRS----SQAELLAIADELEHTWHA 114 (138)
T ss_dssp HHSTTSC----CHHHHHHHHHHHHHTSCC
T ss_pred HhCCCcc----hHHHHHHHHHHHHHHhCC
Confidence 5689998 679999999999977643
Done!