BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030360
(179 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LJU2|PDI53_ARATH Protein disulfide-isomerase 5-3 OS=Arabidopsis thaliana GN=PDIL5-3
PE=2 SV=1
Length = 483
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/178 (69%), Positives = 153/178 (85%), Gaps = 2/178 (1%)
Query: 1 MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARS 60
+E LVAPI E+HK+ALDGK T +++K+ P GGCR+EGYVRVKKVPGNL+ISA S
Sbjct: 258 VEGLVAPIH-PETHKVALDGKSNDTVKHLKK-GPVTGGCRVEGYVRVKKVPGNLVISAHS 315
Query: 61 GAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGA 120
GAHSFD+S+MNMSHV+SH SFGR +SP++++D++RL+PYLG SHDRL+G++FIN E GA
Sbjct: 316 GAHSFDSSQMNMSHVVSHFSFGRMISPRLLTDMKRLLPYLGLSHDRLDGKAFINQHEFGA 375
Query: 121 NVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQV 178
NVTIEHYLQ VKTEVITRR +EHSL+EEYEYTAHSS+ Q+ Y+P AKFHFELSPMQ+
Sbjct: 376 NVTIEHYLQTVKTEVITRRSGQEHSLIEEYEYTAHSSVAQTYYLPVAKFHFELSPMQI 433
>sp|Q9T042|PDI54_ARATH Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana GN=PDIL5-4
PE=2 SV=1
Length = 480
Score = 235 bits (599), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 141/175 (80%), Gaps = 5/175 (2%)
Query: 4 LVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAH 63
LV PI LE H LAL+ K ++ +K+ AP GGCR+EGY+RVKKVPGNL++SARSG+H
Sbjct: 261 LVEPIHLEP-HNLALEDKSDNSSRTLKK-APSTGGCRVEGYMRVKKVPGNLMVSARSGSH 318
Query: 64 SFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVT 123
SFD+S+MNMSHV++HLSFGR++ P+ S+ +RL PYLG SHDRL+GRSFIN R++G NVT
Sbjct: 319 SFDSSQMNMSHVVNHLSFGRRIMPQKFSEFKRLSPYLGLSHDRLDGRSFINQRDLGPNVT 378
Query: 124 IEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQV 178
IEHYLQIVKTEV+ S +L+E YEYTAHSS+ S Y+P AKFHFELSPMQV
Sbjct: 379 IEHYLQIVKTEVVK---SNGQALVEAYEYTAHSSVAHSYYLPVAKFHFELSPMQV 430
>sp|Q69SA9|PDI54_ORYSJ Protein disulfide isomerase-like 5-4 OS=Oryza sativa subsp.
japonica GN=PDIL5-4 PE=2 SV=1
Length = 485
Score = 230 bits (586), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 142/179 (79%), Gaps = 2/179 (1%)
Query: 1 MEELVAPIPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARS 60
ME VA IP +++H LAL+ K T + KRPAP GCRIEG+VRVKKVPG+++ISARS
Sbjct: 258 METYVANIP-KDAHVLALEDKSNKTVDPAKRPAPLTSGCRIEGFVRVKKVPGSVVISARS 316
Query: 61 GAHSFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFI-NHREVG 119
G+HSFD S++N+SH ++ SFG++LS K+ ++++RL PY+GG HDRL G+S+I H +V
Sbjct: 317 GSHSFDPSQINVSHYVTQFSFGKRLSAKMFNELKRLTPYVGGHHDRLAGQSYIVKHGDVN 376
Query: 120 ANVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQV 178
ANVTIEHYLQIVKTE++T R S+E L+EEYEYTAHSSLV S Y+P KFHFE SPMQV
Sbjct: 377 ANVTIEHYLQIVKTELVTLRSSKELKLVEEYEYTAHSSLVHSFYVPVVKFHFEPSPMQV 435
>sp|Q969X5|ERGI1_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Homo sapiens GN=ERGIC1 PE=1 SV=1
Length = 290
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 24/166 (14%)
Query: 20 GKHKT--TAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVIS 77
G+H+ ++K P GCR EG + KVPGN +S S +M+HVI
Sbjct: 94 GRHEVGHIDNSMKIPLNNGAGCRFEGQFSINKVPGNFHVSTHSATAQ--PQNPDMTHVIH 151
Query: 78 HLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKT---- 133
LSFG L + ++ LGG+ DRL +H ++ L+IV T
Sbjct: 152 KLSFGDTLQ---VQNIHGAFNALGGA-DRLTSNPLASH---------DYILKIVPTVYED 198
Query: 134 EVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVE 179
+ +RYS ++++ + EY A+S + IPA F ++LSP+ V+
Sbjct: 199 KSGKQRYSYQYTVANK-EYVAYSHTGR--IIPAIWFRYDLSPITVK 241
>sp|Q9DC16|ERGI1_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Mus musculus GN=Ergic1 PE=1 SV=1
Length = 290
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 24/166 (14%)
Query: 20 GKHKT--TAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVIS 77
G+H+ ++K P GCR EG + KVPGN +S S +M+H I
Sbjct: 94 GRHEVGHIDNSMKIPLNNGAGCRFEGQFSINKVPGNFHVSTHSATAQ--PQNPDMTHTIH 151
Query: 78 HLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKT---- 133
LSFG L + +V LGG+ DRL +H ++ L+IV T
Sbjct: 152 KLSFGDTLQ---VQNVHGAFNALGGA-DRLTSNPLASH---------DYILKIVPTVYED 198
Query: 134 EVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVE 179
+ +RYS ++++ + EY A+S + IPA F ++LSP+ V+
Sbjct: 199 KSGKQRYSYQYTVANK-EYVAYSHTGR--IIPAIWFRYDLSPITVK 241
>sp|Q4V8Y6|ERGI1_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Danio rerio GN=ergic1 PE=2 SV=1
Length = 290
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 24/166 (14%)
Query: 20 GKHKT--TAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVIS 77
G+H+ ++K P GCR EG + KVPGN +S S +M+H+I
Sbjct: 94 GRHEVGHIENSMKVPLNNGHGCRFEGEFSINKVPGNFHVSTHSATAQ--PQSPDMTHIIH 151
Query: 78 HLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEV-- 135
L+FG KL + VQ LGG+ DRL + +H ++ L+IV T
Sbjct: 152 KLAFGAKLQ---VQHVQGAFNALGGA-DRLQSNALASH---------DYILKIVPTVYEE 198
Query: 136 --ITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPMQVE 179
+R+S ++++ + EY A+S + IPA F ++LSP+ V+
Sbjct: 199 LGGKQRFSYQYTVANK-EYVAYSHTGR--IIPAIWFRYDLSPITVK 241
>sp|Q6NS19|ERGI1_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Xenopus laevis GN=ergic1 PE=2 SV=1
Length = 290
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 26/167 (15%)
Query: 20 GKHKT--TAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNMSHVIS 77
G+H+ ++K P A GCR EG + KVPGN +S S + +M H+I
Sbjct: 94 GRHEVGHIDNSMKIPINNAYGCRFEGLFSINKVPGNFHVSTHSAIAQ--PANPDMRHIIH 151
Query: 78 HLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKT--EV 135
LSFG L + ++ LGG+ D+L ++ +H ++ L+IV T E
Sbjct: 152 KLSFGNTLQ---VDNIHGAFNALGGA-DKLASKALESH---------DYVLKIVPTVYED 198
Query: 136 IT--RRYSREHSLLEE-YEYTAHSSLVQSIYIPAAKFHFELSPMQVE 179
+ +++S ++++ + Y +H+ V +PA F ++LSP+ V+
Sbjct: 199 LNGKQQFSYQYTVANKAYVAYSHTGRV----VPAIWFRYDLSPITVK 241
>sp|Q6NVS2|ERGI3_XENTR Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Xenopus tropicalis GN=ergic3 PE=2 SV=1
Length = 384
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 34/164 (20%)
Query: 30 KRPAPKAGGCRIEGYVRVKKVPGNLIIS-----ARSGAH-----SFDTSEMNMSHVISHL 79
K K GC++ G++ V KV GN + +S H SF +NM+H I HL
Sbjct: 191 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHEIRHL 250
Query: 80 SFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRR 139
SFGR D L+ L GS + + +++ +++++IV T + +
Sbjct: 251 SFGR--------DYPGLVNPLDGS----------SVAAMQSSMMFQYFVKIVPTVYV--K 290
Query: 140 YSREHSLLEEYEYTAHSSLVQSIY----IPAAKFHFELSPMQVE 179
E ++ T H + + +P +ELSPM V+
Sbjct: 291 VDGEVLRTNQFSVTRHEKMTNGLIGDQGLPGVFVLYELSPMMVK 334
>sp|Q66KH2|ERGI3_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Xenopus laevis GN=ergic3 PE=2 SV=1
Length = 389
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 39/169 (23%)
Query: 30 KRPAPKAGGCRIEGYVRVKKVPGNLIIS-----ARSGAH----------SFDTSEMNMSH 74
K K GC++ G++ V KV GN + +S H SF +NM+H
Sbjct: 191 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHAVEIHDLQSFGLDNINMTH 250
Query: 75 VISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTE 134
I HLSFG+ G + L+G S + + +++ +++++IV T
Sbjct: 251 EIKHLSFGKDYP---------------GLVNPLDGTSIVAMQ---SSMMFQYFVKIVPT- 291
Query: 135 VITRRYSREHSLLEEYEYTAHSSLVQSIY----IPAAKFHFELSPMQVE 179
+ + E ++ T H + + +P +ELSPM V+
Sbjct: 292 -VYVKVDGEVLRTNQFSVTRHEKMTNGLIGDQGLPGVFVLYELSPMMVK 339
>sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Danio rerio GN=ergic3 PE=2 SV=1
Length = 383
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 70/182 (38%), Gaps = 45/182 (24%)
Query: 21 KHKTTAENVKRPA-------PKAGGCRIEGYVRVKKVPGNLIIS-----ARSGAH----- 63
K T E KR K GC++ G++ V KV GN + +S H
Sbjct: 174 KTPDTIEQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQ 233
Query: 64 SFDTSEMNMSHVISHLSFGRKLSPKV--MSDVQRLIPYLGGSHDRLNGRSFINHREVGAN 121
SF +NM+H I HLSFG+ V + D P A+
Sbjct: 234 SFGLDNINMTHFIKHLSFGKDYPGIVNPLDDTNVAAPQ--------------------AS 273
Query: 122 VTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIY----IPAAKFHFELSPMQ 177
+ +++++IV T I + E ++ T H + + +P +ELSPM
Sbjct: 274 MMYQYFVKIVPT--IYVKGDGEVVKTNQFSVTRHEKIANGLIGDQGLPGVFVLYELSPMM 331
Query: 178 VE 179
V+
Sbjct: 332 VK 333
>sp|Q5R8G3|ERGI3_PONAB Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Pongo abelii GN=ERGIC3 PE=2 SV=1
Length = 383
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 34/159 (21%)
Query: 35 KAGGCRIEGYVRVKKVPGNLIIS-----ARSGAH-----SFDTSEMNMSHVISHLSFGRK 84
K GC++ G++ V KV GN + +S H SF +NM+H I HLSFG
Sbjct: 195 KNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHLSFGED 254
Query: 85 LSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREH 144
P + +N N A++ ++++++V T + + E
Sbjct: 255 Y-PGI-----------------VNPLDHTNVTAPQASMMFQYFVKVVPT--VYMKVDGEV 294
Query: 145 SLLEEYEYTAHSSLVQSIY----IPAAKFHFELSPMQVE 179
++ T H + + +P +ELSPM V+
Sbjct: 295 LRTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVK 333
>sp|Q9Y282|ERGI3_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Homo sapiens GN=ERGIC3 PE=1 SV=1
Length = 383
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 34/159 (21%)
Query: 35 KAGGCRIEGYVRVKKVPGNLIIS-----ARSGAH-----SFDTSEMNMSHVISHLSFGRK 84
K GC++ G++ V KV GN + +S H SF +NM+H I HLSFG
Sbjct: 195 KNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHLSFGED 254
Query: 85 LSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREH 144
P + +N N A++ ++++++V T + + E
Sbjct: 255 Y-PGI-----------------VNPLDHTNVTAPQASMMFQYFVKVVPT--VYMKVDGEV 294
Query: 145 SLLEEYEYTAHSSLVQSIY----IPAAKFHFELSPMQVE 179
++ T H + + +P +ELSPM V+
Sbjct: 295 LRTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVK 333
>sp|Q9CQE7|ERGI3_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Mus musculus GN=Ergic3 PE=2 SV=1
Length = 383
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 34/159 (21%)
Query: 35 KAGGCRIEGYVRVKKVPGNLIIS-----ARSGAH-----SFDTSEMNMSHVISHLSFGRK 84
K GC++ G++ V KV GN + +S H SF +NM+H I HLSFG
Sbjct: 195 KNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIKHLSFGED 254
Query: 85 LSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREH 144
P + +N N A++ ++++++V T + + E
Sbjct: 255 Y-PGI-----------------VNPLDHTNVTAPQASMMFQYFVKVVPT--VYMKVDGEV 294
Query: 145 SLLEEYEYTAHSSLVQSIY----IPAAKFHFELSPMQVE 179
++ T H + + +P +ELSPM V+
Sbjct: 295 LRTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVK 333
>sp|Q4R8X1|ERGI3_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Macaca fascicularis GN=ERGIC3 PE=2 SV=1
Length = 382
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 34/159 (21%)
Query: 35 KAGGCRIEGYVRVKKVPGNLIIS-----ARSGAH-----SFDTSEMNMSHVISHLSFGRK 84
K GC++ G++ V KV GN + +S H SF +NM+H I HLSFG
Sbjct: 194 KNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHLSFGED 253
Query: 85 LSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREH 144
P + +N N A++ ++++++V T + + E
Sbjct: 254 Y-PGI-----------------VNPLDHTNVTAPQASMMFQYFVKVVPT--VYMKVDGEV 293
Query: 145 SLLEEYEYTAHSSLVQSIY----IPAAKFHFELSPMQVE 179
++ T H + + +P +ELSPM V+
Sbjct: 294 LRTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVK 332
>sp|Q5EAE0|ERGI3_BOVIN Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Bos taurus GN=ERGIC3 PE=2 SV=1
Length = 383
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 34/159 (21%)
Query: 35 KAGGCRIEGYVRVKKVPGNLIIS-----ARSGAH-----SFDTSEMNMSHVISHLSFGRK 84
K GC++ G++ V KV GN + +S H SF +NM+H I HLSFG
Sbjct: 195 KNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIRHLSFGED 254
Query: 85 LSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREH 144
P + +N N A++ ++++++V T + + E
Sbjct: 255 Y-PGI-----------------VNPLDHTNVTAPQASMMFQYFVKVVPT--VYMKVDGEV 294
Query: 145 SLLEEYEYTAHSSLVQSIY----IPAAKFHFELSPMQVE 179
++ T H + + +P +ELSPM V+
Sbjct: 295 LRTNQFSVTRHEKVANGLMGDQGLPGVFVLYELSPMMVK 333
>sp|Q04651|ERV41_YEAST ER-derived vesicles protein ERV41 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV41 PE=1 SV=1
Length = 352
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 68/182 (37%), Gaps = 34/182 (18%)
Query: 8 IPLEESHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARS----GAH 63
IP E KL + N K P+ GC + G + V +V G L I+A+S +
Sbjct: 132 IPAEFREKLDTRSFFDESDPN-KAHLPEFNGCHVFGSIPVNRVSGELQITAKSLGYVASR 190
Query: 64 SFDTSEMNMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVT 123
E+ +HVI+ SFG PY+ D N F N E T
Sbjct: 191 KAPLEELKFNHVINEFSFG------------DFYPYIDNPLD--NTAQF-NQDE--PLTT 233
Query: 124 IEHYLQIVKT-------EVITRRYSREHSLLEEYEYTAHSSLVQSIYIPAAKFHFELSPM 176
+Y +V T EV T +YS + +Y Y + +P F + P+
Sbjct: 234 YVYYTSVVPTLFKKLGAEVDTNQYS-----VNDYRYLYKDVAAKGDKMPGIFFKYNFEPL 288
Query: 177 QV 178
+
Sbjct: 289 SI 290
>sp|P39727|ERV46_YEAST ER-derived vesicles protein ERV46 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV46 PE=1 SV=2
Length = 415
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 11/59 (18%)
Query: 38 GCRIEGYVRVKKVPGNLIIS-----ARSGAHSFDTS------EMNMSHVISHLSFGRKL 85
GCRI+G ++ ++ GNL + + H DTS +N +H+I+HLSFG+ +
Sbjct: 205 GCRIKGSAQINRIQGNLHFAPGKPYQNAYGHFHDTSLYDKTSNLNFNHIINHLSFGKPI 263
>sp|Q09895|YAI8_SCHPO Uncharacterized protein C24B11.08c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC24B11.08c PE=3 SV=1
Length = 390
Score = 37.0 bits (84), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 42/188 (22%)
Query: 18 LDGKHKTTAENVKR--PAPKAGGCRIEGYVRVKKVPGNLII----SARSG-AHSFDTSEM 70
+D + EN K A K GC + G + V ++ GN I S ++G H DT +
Sbjct: 174 VDAFKQCKDENFKELYEAQKVEGCNLAGQLSVNRMAGNFHIAPGRSTQNGNQHVHDTRDY 233
Query: 71 -------NMSHVISHLSFGRKLSPKVMSDVQRLIPYLGGSHDRLNGRSFINHREVGANVT 123
+MSH I HLSFG P + + V P L G+ +++ A+
Sbjct: 234 INELDLHDMSHSIHHLSFG----PPLDASVHYSNP-LDGTVKKVS----------TADYR 278
Query: 124 IEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQSIY-------------IPAAKFH 170
E++++ V + + S +Y T H ++ IP F
Sbjct: 279 YEYFIKCVSYQFMPLSKSTLPIDTNKYAVTQHERSIRGGREEKVPTHVNFHGGIPGVWFQ 338
Query: 171 FELSPMQV 178
F++SPM+V
Sbjct: 339 FDISPMRV 346
>sp|Q96RQ1|ERGI2_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Homo sapiens GN=ERGIC2 PE=1 SV=2
Length = 377
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 27 ENVKRPAPKAGGCRIEGYVRVKKVPGNLIISA-------RSGAH---SFDTSEMNMSHVI 76
E+ +P A CRI G++ V KV GN I+ R AH + N SH I
Sbjct: 160 EDDSSQSPNA--CRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNHESYNFSHRI 217
Query: 77 SHLSFGRKLSPKVMS 91
HLSFG +L P +++
Sbjct: 218 DHLSFG-ELVPAIIN 231
>sp|Q5EHU7|ERGI2_GECJA Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Gecko japonicus GN=ERGIC2 PE=2 SV=1
Length = 377
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 20/100 (20%)
Query: 10 LEESHKLALDGKHKTTAENVKRPAPK--------AGGCRIEGYVRVKKVPGNLIISA--- 58
L+E H L D K+T ++ P CRI G++ V KV GN I+
Sbjct: 134 LQEEHSLQ-DVIFKSTFKSASTALPPREDDSSQPPDACRIHGHLYVNKVAGNFHITVGKA 192
Query: 59 ----RSGAH---SFDTSEMNMSHVISHLSFGRKLSPKVMS 91
R AH + N SH I HLSFG +L P +++
Sbjct: 193 IPHPRGHAHLAALVNHDSYNFSHRIDHLSFG-ELVPGIIN 231
>sp|Q4R5C3|ERGI2_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Macaca fascicularis GN=ERGIC2 PE=2 SV=1
Length = 377
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 27 ENVKRPAPKAGGCRIEGYVRVKKVPGNLIISA-------RSGAH---SFDTSEMNMSHVI 76
E+ +P A CRI G++ V KV GN I+ R AH + N SH I
Sbjct: 160 EDDSSQSPDA--CRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNHESYNFSHRI 217
Query: 77 SHLSFGRKLSPKVMS 91
HLSFG +L P +++
Sbjct: 218 DHLSFG-ELVPAIIN 231
>sp|Q9CR89|ERGI2_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Mus musculus GN=Ergic2 PE=2 SV=1
Length = 377
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 11/64 (17%)
Query: 38 GCRIEGYVRVKKVPGNLIISA-------RSGAH---SFDTSEMNMSHVISHLSFGRKLSP 87
CRI G++ V KV GN I+ R AH + N SH I HLSFG +L P
Sbjct: 169 ACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNHDSYNFSHRIDHLSFG-ELVP 227
Query: 88 KVMS 91
+++
Sbjct: 228 GIIN 231
>sp|Q7T2D4|ERGI2_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Danio rerio GN=ergic2 PE=2 SV=1
Length = 376
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 23/90 (25%)
Query: 32 PAPKAGGCRIEGYVRVKKVPGNLIISA-------RSGAH-----SFDTSEMNMSHVISHL 79
P CRI G++ V KV GN I+ R AH S +T N SH I HL
Sbjct: 162 PNQPLNACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVSHET--YNFSHRIDHL 219
Query: 80 SFGRK----LSP-----KVMSDVQRLIPYL 100
SFG + L+P KV +D ++ Y
Sbjct: 220 SFGEEIPGILNPLDGTEKVSADHNQMFQYF 249
>sp|Q54DW2|ERGI3_DICDI Probable endoplasmic reticulum-Golgi intermediate compartment
protein 3 OS=Dictyostelium discoideum GN=ergic3 PE=3
SV=1
Length = 383
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 10/58 (17%)
Query: 38 GCRIEGYVRVKKVPGNLIISARSGAHS----------FDTSEMNMSHVISHLSFGRKL 85
GC++ G++ V KV GN + F N+SH I+ LSFG
Sbjct: 197 GCQVYGFILVNKVAGNFHFAPGKSFQQHHMHVHDLQPFKDGSFNVSHTINRLSFGNDF 254
>sp|Q2PDF6|RTPR_EUGGR Adenosylcobalamin-dependent ribonucleoside-triphosphate reductase
OS=Euglena gracilis GN=rnr PE=1 SV=1
Length = 729
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/70 (21%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 103 SHDRLNGR-SFINHREVGANVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAHSSLVQS 161
+ R+NG+ + + R +G N +E L+ ++ + + +H LE+++ T +S+L+ +
Sbjct: 406 AFSRMNGKPDYRDQRVLGGNPCLEQSLESMELCCLVETFPDKHETLEDFKRTLYSALLYA 465
Query: 162 IYIPAAKFHF 171
+ H+
Sbjct: 466 KTVTLLPLHW 475
>sp|Q566N0|ENPP4_DANRE Ectonucleotide pyrophosphatase/phosphodiesterase family member 4
OS=Danio rerio GN=enpp4 PE=2 SV=1
Length = 459
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 96 LIPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITRRYSREHSLLEEYEYTAH 155
L+ + G D LN SF N + ++ + H L V T T+ + +SL+ +H
Sbjct: 36 LVSFDGFRADYLNKYSFPNLEKFFSDGVLVHELTNVFT---TKTFPNHYSLVTGLYAESH 92
Query: 156 SSLVQSIYIPAAKFHFEL 173
L +Y P AK HF +
Sbjct: 93 GMLASIMYDPVAKKHFSI 110
>sp|O33774|HIS6_SULSO Imidazole glycerol phosphate synthase subunit HisF OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=hisF PE=3 SV=1
Length = 251
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 40/84 (47%)
Query: 13 SHKLALDGKHKTTAENVKRPAPKAGGCRIEGYVRVKKVPGNLIISARSGAHSFDTSEMNM 72
+ K++++ +++ VK+ A + G + + VKKV GN I+ +SG ++ +
Sbjct: 97 ADKVSINTAAVESSQIVKKSAEEFGSQAVVVAIDVKKVSGNWIVFTKSGTYNTRLDAIKW 156
Query: 73 SHVISHLSFGRKLSPKVMSDVQRL 96
+ + L G L + D RL
Sbjct: 157 AKKVEELGAGEILLTSIDRDGTRL 180
>sp|Q02256|PVH1_YEAST Tyrosine-protein phosphatase YVH1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YVH1 PE=1 SV=1
Length = 364
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
Query: 99 YLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVI 136
YLGG R I+HR +GA I H L ++K +VI
Sbjct: 20 YLGGI------RPIIDHRPLGAEFNITHILSVIKFQVI 51
>sp|O94283|ERV41_SCHPO ER-derived vesicles protein 41 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=erv41 PE=1 SV=1
Length = 333
Score = 31.2 bits (69), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 34 PKAG-GCRIEGYVRVKKVPGNLIISARS---GAHSFDTSEMNMSHVISHLSFG 82
P +G CRI G + V +V G L I+A G + +N +H I LSFG
Sbjct: 146 PGSGTACRIYGQLVVNRVNGQLHITAPGWGYGRSNIPFHSLNFTHYIEELSFG 198
>sp|Q5A387|LCMT1_CANAL Leucine carboxyl methyltransferase 1 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=PPM1 PE=3 SV=1
Length = 367
Score = 30.0 bits (66), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 13/66 (19%)
Query: 97 IPYLGGSHDRLNGRSFINHREVGANVTIEHYLQIVKTEVITR----RYSREHSLLEEYEY 152
+ Y+GG R +GR +I+H+E+G +I K E+I R EH L EY
Sbjct: 298 MSYIGGYKVRQDGREWIDHKEMG---------RINKLEMIDEIEEIRLLLEHYCLIYGEY 348
Query: 153 TAHSSL 158
T +L
Sbjct: 349 TEEKTL 354
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,715,042
Number of Sequences: 539616
Number of extensions: 2560335
Number of successful extensions: 5792
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 5755
Number of HSP's gapped (non-prelim): 35
length of query: 179
length of database: 191,569,459
effective HSP length: 110
effective length of query: 69
effective length of database: 132,211,699
effective search space: 9122607231
effective search space used: 9122607231
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)