BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030362
(179 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q66KH2|ERGI3_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Xenopus laevis GN=ergic3 PE=2 SV=1
Length = 389
Score = 146 bits (369), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 109/183 (59%), Gaps = 15/183 (8%)
Query: 2 QVYGVLDVQRVAGNFH-----------ISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFG 50
QVYG L+V +VAGNFH + VH + I+ Q G N+N++H I LSFG
Sbjct: 201 QVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHAVEIHDLQSF--GLDNINMTHEIKHLSFG 258
Query: 51 PKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF 110
YPG+ NPLDGT + +S F+Y++KIVPT Y + +VL TNQFSVT + N
Sbjct: 259 KDYPGLVNPLDGTSIVAMQSSMMFQYFVKIVPTVYVKVDGEVLRTNQFSVTRHEKMTNGL 318
Query: 111 --DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEA 168
D+ P V+ LY+LSP+ V E+ RSF H +T +CA++GG F + G++D +Y A
Sbjct: 319 IGDQGLPGVFVLYELSPMMVKFTEKHRSFTHFLTGVCAIIGGVFTVAGLIDSLIYYSTRA 378
Query: 169 LTK 171
+ K
Sbjct: 379 IQK 381
>sp|Q6NVS2|ERGI3_XENTR Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Xenopus tropicalis GN=ergic3 PE=2 SV=1
Length = 384
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 108/176 (61%), Gaps = 6/176 (3%)
Query: 2 QVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIH 57
QVYG L+V +VAGNFH S +++V + G N+N++H I LSFG YPG+
Sbjct: 201 QVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHEIRHLSFGRDYPGLV 260
Query: 58 NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF--DRTWP 115
NPLDG+ +S F+Y++KIVPT Y + +VL TNQFSVT + N D+ P
Sbjct: 261 NPLDGSSVAAMQSSMMFQYFVKIVPTVYVKVDGEVLRTNQFSVTRHEKMTNGLIGDQGLP 320
Query: 116 AVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D +Y A+ K
Sbjct: 321 GVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGVFTVAGLIDSLVYYSTRAIQK 376
>sp|Q4R8X1|ERGI3_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Macaca fascicularis GN=ERGIC3 PE=2 SV=1
Length = 382
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 106/176 (60%), Gaps = 6/176 (3%)
Query: 2 QVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIH 57
QVYG L+V +VAGNFH S +++V + G N+N++H I LSFG YPGI
Sbjct: 199 QVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHLSFGEDYPGIV 258
Query: 58 NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF--DRTWP 115
NPLD T S F+Y++K+VPT Y + +VL TNQFSVT + N D+ P
Sbjct: 259 NPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANGLLGDQGLP 318
Query: 116 AVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D +Y A+ K
Sbjct: 319 GVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQK 374
>sp|Q9Y282|ERGI3_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Homo sapiens GN=ERGIC3 PE=1 SV=1
Length = 383
Score = 144 bits (363), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 106/176 (60%), Gaps = 6/176 (3%)
Query: 2 QVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIH 57
QVYG L+V +VAGNFH S +++V + G N+N++H I LSFG YPGI
Sbjct: 200 QVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHLSFGEDYPGIV 259
Query: 58 NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF--DRTWP 115
NPLD T S F+Y++K+VPT Y + +VL TNQFSVT + N D+ P
Sbjct: 260 NPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANGLLGDQGLP 319
Query: 116 AVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D +Y A+ K
Sbjct: 320 GVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQK 375
>sp|Q5R8G3|ERGI3_PONAB Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Pongo abelii GN=ERGIC3 PE=2 SV=1
Length = 383
Score = 144 bits (363), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 106/176 (60%), Gaps = 6/176 (3%)
Query: 2 QVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIH 57
QVYG L+V +VAGNFH S +++V + G N+N++H I LSFG YPGI
Sbjct: 200 QVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHLSFGEDYPGIV 259
Query: 58 NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF--DRTWP 115
NPLD T S F+Y++K+VPT Y + +VL TNQFSVT + N D+ P
Sbjct: 260 NPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANGLLGDQGLP 319
Query: 116 AVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D +Y A+ K
Sbjct: 320 GVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQK 375
>sp|Q5EAE0|ERGI3_BOVIN Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Bos taurus GN=ERGIC3 PE=2 SV=1
Length = 383
Score = 144 bits (362), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 106/176 (60%), Gaps = 6/176 (3%)
Query: 2 QVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIH 57
QVYG L+V +VAGNFH S +++V + G N+N++H I LSFG YPGI
Sbjct: 200 QVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIRHLSFGEDYPGIV 259
Query: 58 NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF--DRTWP 115
NPLD T S F+Y++K+VPT Y + +VL TNQFSVT + N D+ P
Sbjct: 260 NPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANGLMGDQGLP 319
Query: 116 AVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D +Y A+ K
Sbjct: 320 GVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQK 375
>sp|Q9CQE7|ERGI3_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Mus musculus GN=Ergic3 PE=2 SV=1
Length = 383
Score = 144 bits (362), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 106/176 (60%), Gaps = 6/176 (3%)
Query: 2 QVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIH 57
QVYG L+V +VAGNFH S +++V + G N+N++H I LSFG YPGI
Sbjct: 200 QVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIKHLSFGEDYPGIV 259
Query: 58 NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF--DRTWP 115
NPLD T S F+Y++K+VPT Y + +VL TNQFSVT + N D+ P
Sbjct: 260 NPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANGLLGDQGLP 319
Query: 116 AVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D +Y A+ K
Sbjct: 320 GVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQK 375
>sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Danio rerio GN=ergic3 PE=2 SV=1
Length = 383
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 105/176 (59%), Gaps = 6/176 (3%)
Query: 2 QVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIH 57
QVYG L+V +VAGNFH S +++V + G N+N++H I LSFG YPGI
Sbjct: 200 QVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHFIKHLSFGKDYPGIV 259
Query: 58 NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF--DRTWP 115
NPLD T S ++Y++KIVPT Y +V+ TNQFSVT + N D+ P
Sbjct: 260 NPLDDTNVAAPQASMMYQYFVKIVPTIYVKGDGEVVKTNQFSVTRHEKIANGLIGDQGLP 319
Query: 116 AVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
V+ LY+LSP+ V E++RSF H +T +CA++GG F + G++D +Y A+ K
Sbjct: 320 GVFVLYELSPMMVKFTEKQRSFTHFLTGVCAIIGGVFTVAGLIDSLIYHSARAIQK 375
>sp|Q54DW2|ERGI3_DICDI Probable endoplasmic reticulum-Golgi intermediate compartment
protein 3 OS=Dictyostelium discoideum GN=ergic3 PE=3
SV=1
Length = 383
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 106/179 (59%), Gaps = 11/179 (6%)
Query: 2 QVYGVLDVQRVAGNFHIS------VHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPG 55
QVYG + V +VAGNFH + H ++++ Q G+ NVSH I+ LSFG +PG
Sbjct: 199 QVYGFILVNKVAGNFHFAPGKSFQQHHMHVHDLQPFKDGS--FNVSHTINRLSFGNDFPG 256
Query: 56 IHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI---NEFDR 112
I NPLD + G F+Y++K+VPT Y ++ + + TNQ+SVTE++ + E
Sbjct: 257 IKNPLDDVTKTEMVGVGMFQYFVKVVPTIYEGLNGNRIATNQYSVTEHYRLLAKKGEEPS 316
Query: 113 TWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
P ++F+YDLSPI + + E +SF +T +CA++GG F + G+ D ++Y + L K
Sbjct: 317 GLPGLFFMYDLSPIMMKVSERGKSFASFLTNVCAIIGGVFTVFGIFDSFIYYSTKNLQK 375
>sp|Q9CR89|ERGI2_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Mus musculus GN=Ergic2 PE=2 SV=1
Length = 377
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 94/167 (56%), Gaps = 15/167 (8%)
Query: 2 QVYGVLDVQRVAGNFHISVHGL------NIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPG 55
+++G L V +VAGNFHI+V + ++A ++ + N SH I LSFG PG
Sbjct: 171 RIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALV--NHDSYNFSHRIDHLSFGELVPG 228
Query: 56 IHNPLDGTVRMLHDTSGTFKYYIKIVPTEYR--YISKDVLPTNQFSVTEYFSTINEFDRT 113
I NPLDGT ++ D + F+Y+I +VPT+ IS D T+QFSVTE IN +
Sbjct: 229 IINPLDGTEKIAVDHNQMFQYFITVVPTKLHTYKISAD---THQFSVTERERIINHAAGS 285
Query: 114 W--PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 158
++ YDLS + VT+ EE F RLC ++GG F+ TGML
Sbjct: 286 HGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIIGGIFSTTGML 332
>sp|Q5EHU7|ERGI2_GECJA Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Gecko japonicus GN=ERGIC2 PE=2 SV=1
Length = 377
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 94/167 (56%), Gaps = 15/167 (8%)
Query: 2 QVYGVLDVQRVAGNFHISVHGL------NIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPG 55
+++G L V +VAGNFHI+V + ++A ++ + N SH I LSFG PG
Sbjct: 171 RIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALV--NHDSYNFSHRIDHLSFGELVPG 228
Query: 56 IHNPLDGTVRMLHDTSGTFKYYIKIVPTEYR--YISKDVLPTNQFSVTEYFSTINEFDRT 113
I NPLDGT ++ D + F+Y+I +VPT+ IS D T+QFSVTE IN +
Sbjct: 229 IINPLDGTEKIALDHNQMFQYFITVVPTKLHTYKISAD---THQFSVTERERVINHAAGS 285
Query: 114 W--PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 158
++ YDLS + VT+ EE F RLC ++GG F+ TGML
Sbjct: 286 HGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIFSTTGML 332
>sp|Q4V8Y6|ERGI1_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Danio rerio GN=ergic1 PE=2 SV=1
Length = 290
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 91/173 (52%), Gaps = 14/173 (8%)
Query: 5 GVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYP-----GIHNP 59
G + +V GNFH+S H AQ ++ +++H+IH L+FG K G N
Sbjct: 119 GEFSINKVPGNFHVSTHSA---TAQ-----PQSPDMTHIIHKLAFGAKLQVQHVQGAFNA 170
Query: 60 LDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVT-EYFSTINEFDRTWPAVY 118
L G R+ + + Y +KIVPT Y + + Q++V + + + R PA++
Sbjct: 171 LGGADRLQSNALASHDYILKIVPTVYEELGGKQRFSYQYTVANKEYVAYSHTGRIIPAIW 230
Query: 119 FLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
F YDLSPITV E RR F IT +CA++GGTF + G++D ++ EA K
Sbjct: 231 FRYDLSPITVKYTERRRPFYRFITTICAIIGGTFTVAGIIDSCIFTASEAWKK 283
>sp|Q96RQ1|ERGI2_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Homo sapiens GN=ERGIC2 PE=1 SV=2
Length = 377
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 94/167 (56%), Gaps = 15/167 (8%)
Query: 2 QVYGVLDVQRVAGNFHISVHGL------NIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPG 55
+++G L V +VAGNFHI+V + ++A ++ ++ N SH I LSFG P
Sbjct: 171 RIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALV--NHESYNFSHRIDHLSFGELVPA 228
Query: 56 IHNPLDGTVRMLHDTSGTFKYYIKIVPTEYR--YISKDVLPTNQFSVTEYFSTINEFDRT 113
I NPLDGT ++ D + F+Y+I +VPT+ IS D T+QFSVTE IN +
Sbjct: 229 IINPLDGTEKIAIDHNQMFQYFITVVPTKLHTYKISAD---THQFSVTERERIINHAAGS 285
Query: 114 W--PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 158
++ YDLS + VT+ EE F RLC ++GG F+ TGML
Sbjct: 286 HGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIFSTTGML 332
>sp|Q4R5C3|ERGI2_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Macaca fascicularis GN=ERGIC2 PE=2 SV=1
Length = 377
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 94/167 (56%), Gaps = 15/167 (8%)
Query: 2 QVYGVLDVQRVAGNFHISVHGL------NIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPG 55
+++G L V +VAGNFHI+V + ++A ++ ++ N SH I LSFG P
Sbjct: 171 RIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALV--NHESYNFSHRIDHLSFGELVPA 228
Query: 56 IHNPLDGTVRMLHDTSGTFKYYIKIVPTEYR--YISKDVLPTNQFSVTEYFSTINEFDRT 113
I NPLDGT ++ D + F+Y+I +VPT+ IS D T+QFSVTE IN +
Sbjct: 229 IINPLDGTEKIAIDHNQMFQYFITVVPTKLHTYKISAD---THQFSVTERERIINHAAGS 285
Query: 114 W--PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 158
++ YDLS + VT+ EE F RLC ++GG F+ TGML
Sbjct: 286 HGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIFSTTGML 332
>sp|Q7T2D4|ERGI2_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Danio rerio GN=ergic2 PE=2 SV=1
Length = 376
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 94/165 (56%), Gaps = 11/165 (6%)
Query: 2 QVYGVLDVQRVAGNFHISVHGL------NIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPG 55
+++G L V +VAGNFHI+V + ++A ++ + N SH I LSFG + PG
Sbjct: 170 RIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALV--SHETYNFSHRIDHLSFGEEIPG 227
Query: 56 IHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTW- 114
I NPLDGT ++ D + F+Y+I IVPT+ + K T+Q+SVTE IN +
Sbjct: 228 ILNPLDGTEKVSADHNQMFQYFITIVPTKLQ-TYKVYADTHQYSVTERERVINHAAGSHG 286
Query: 115 -PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 158
++ YD+S + V + E+ F + RLC ++GG F+ TGML
Sbjct: 287 VSGIFMKYDISSLMVKVTEQHMPFWQFLVRLCGIIGGIFSTTGML 331
>sp|Q969X5|ERGI1_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Homo sapiens GN=ERGIC1 PE=1 SV=1
Length = 290
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 5 GVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYP-----GIHNP 59
G + +V GNFH+S H AQ +N +++HVIH LSFG G N
Sbjct: 119 GQFSINKVPGNFHVSTHSA---TAQ-----PQNPDMTHVIHKLSFGDTLQVQNIHGAFNA 170
Query: 60 LDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVT-EYFSTINEFDRTWPAVY 118
L G R+ + + Y +KIVPT Y S + Q++V + + + R PA++
Sbjct: 171 LGGADRLTSNPLASHDYILKIVPTVYEDKSGKQRYSYQYTVANKEYVAYSHTGRIIPAIW 230
Query: 119 FLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
F YDLSPITV E R+ IT +CA++GGTF + G+LD ++ EA K
Sbjct: 231 FRYDLSPITVKYTERRQPLYRFITTICAIIGGTFTVAGILDSCIFTASEAWKK 283
>sp|Q9DC16|ERGI1_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Mus musculus GN=Ergic1 PE=1 SV=1
Length = 290
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 88/173 (50%), Gaps = 14/173 (8%)
Query: 5 GVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYP-----GIHNP 59
G + +V GNFH+S H AQ +N +++H IH LSFG G N
Sbjct: 119 GQFSINKVPGNFHVSTHSA---TAQ-----PQNPDMTHTIHKLSFGDTLQVQNVHGAFNA 170
Query: 60 LDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVT-EYFSTINEFDRTWPAVY 118
L G R+ + + Y +KIVPT Y S + Q++V + + + R PA++
Sbjct: 171 LGGADRLTSNPLASHDYILKIVPTVYEDKSGKQRYSYQYTVANKEYVAYSHTGRIIPAIW 230
Query: 119 FLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
F YDLSPITV E R+ IT +CA++GGTF + G+LD ++ EA K
Sbjct: 231 FRYDLSPITVKYTERRQPLYRFITTICAIIGGTFTVAGILDSCIFTASEAWKK 283
>sp|Q6NS19|ERGI1_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Xenopus laevis GN=ergic1 PE=2 SV=1
Length = 290
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 14/173 (8%)
Query: 5 GVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYP-----GIHNP 59
G+ + +V GNFH+S H +AQ N ++ H+IH LSFG G N
Sbjct: 119 GLFSINKVPGNFHVSTHSA---IAQ-----PANPDMRHIIHKLSFGNTLQVDNIHGAFNA 170
Query: 60 LDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVT-EYFSTINEFDRTWPAVY 118
L G ++ + Y +KIVPT Y ++ + Q++V + + + R PA++
Sbjct: 171 LGGADKLASKALESHDYVLKIVPTVYEDLNGKQQFSYQYTVANKAYVAYSHTGRVVPAIW 230
Query: 119 FLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
F YDLSPITV E R+ IT +CA++GGTF + G+LD +++ EA K
Sbjct: 231 FRYDLSPITVKYTERRQPMYRFITTVCAIIGGTFTVAGILDSFIFTASEAWKK 283
>sp|Q09895|YAI8_SCHPO Uncharacterized protein C24B11.08c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC24B11.08c PE=3 SV=1
Length = 390
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 33/189 (17%)
Query: 5 GVLDVQRVAGNFHIS-----------VHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKY 53
G L V R+AGNFHI+ VH Y+ ++ ++SH IH LSFGP
Sbjct: 201 GQLSVNRMAGNFHIAPGRSTQNGNQHVHDTRDYINELDLH-----DMSHSIHHLSFGPPL 255
Query: 54 PG-IH--NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLP--TNQFSVTEYFSTIN 108
+H NPLDGTV+ + ++Y+IK V ++ +SK LP TN+++VT++ +I
Sbjct: 256 DASVHYSNPLDGTVKKVSTADYRYEYFIKCVSYQFMPLSKSTLPIDTNKYAVTQHERSIR 315
Query: 109 -----------EFDRTWPAVYFLYDLSPITVTIKEER-RSFLHLITRLCAVLGGTFALTG 156
F P V+F +D+SP+ V ++ R +F ++ + A+LGG L
Sbjct: 316 GGREEKVPTHVNFHGGIPGVWFQFDISPMRVIERQVRGNTFGGFLSNVLALLGGCVTLAS 375
Query: 157 MLDRWMYRL 165
+DR Y +
Sbjct: 376 FVDRGYYEV 384
>sp|Q04651|ERV41_YEAST ER-derived vesicles protein ERV41 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV41 PE=1 SV=1
Length = 352
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 11/169 (6%)
Query: 3 VYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDG 62
V+G + V RV+G I+ L YVA + + +HVI++ SFG YP I NPLD
Sbjct: 164 VFGSIPVNRVSGELQITAKSLG-YVASRK-APLEELKFNHVINEFSFGDFYPYIDNPLDN 221
Query: 63 TVRMLHDTS-GTFKYYIKIVPTEYRYISKDVLPTNQFSVTEY---FSTINEFDRTWPAVY 118
T + D T+ YY +VPT ++ + +V TNQ+SV +Y + + P ++
Sbjct: 222 TAQFNQDEPLTTYVYYTSVVPTLFKKLGAEV-DTNQYSVNDYRYLYKDVAAKGDKMPGIF 280
Query: 119 FLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLE 167
F Y+ P+++ + + R SF+ + RL A+ + W++ LL+
Sbjct: 281 FKYNFEPLSIVVSDVRLSFIQFLVRLVAIC----SFLVYCASWIFTLLD 325
>sp|O94283|ERV41_SCHPO ER-derived vesicles protein 41 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=erv41 PE=1 SV=1
Length = 333
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 84/161 (52%), Gaps = 7/161 (4%)
Query: 2 QVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLD 61
++YG L V RV G HI+ G + + F ++N +H I +LSFG YP + N LD
Sbjct: 153 RIYGQLVVNRVNGQLHITAPGWGYGRSNIPF---HSLNFTHYIEELSFGEYYPALVNALD 209
Query: 62 GTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINE--FDRTWPAVYF 119
G +D F+YY+ ++PT Y+ S TNQ+S+TE S + + F P ++
Sbjct: 210 GHYGHANDHPFAFQYYLSVLPTSYKS-SFRSFETNQYSLTEN-SVVRQLGFGSLPPGIFI 267
Query: 120 LYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDR 160
YDL P+ V + ++ + + R+ A+ GG + ++R
Sbjct: 268 DYDLEPLAVRVVDKHPNVASTLLRILAISGGLITVASWIER 308
>sp|Q9T042|PDI54_ARATH Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana GN=PDIL5-4
PE=2 SV=1
Length = 480
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 27/188 (14%)
Query: 2 QVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPK--------- 52
+V G + V++V GN +S F ++ +N+SHV++ LSFG +
Sbjct: 295 RVEGYMRVKKVPGNLMVSARS-----GSHSFDSSQ-MNMSHVVNHLSFGRRIMPQKFSEF 348
Query: 53 -----YPGI-HNPLDGTVRMLHDTSG---TFKYYIKIVPTEYRYISKDVLPTNQFSVTEY 103
Y G+ H+ LDG + G T ++Y++IV TE + L + T +
Sbjct: 349 KRLSPYLGLSHDRLDGRSFINQRDLGPNVTIEHYLQIVKTEVVKSNGQAL-VEAYEYTAH 407
Query: 104 FSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMY 163
S + + P F ++LSP+ V I E +SF H IT +CA++GG F + G+LD ++
Sbjct: 408 SSVAHSY--YLPVAKFHFELSPMQVLITENSKSFSHFITNVCAIIGGVFTVAGILDSILH 465
Query: 164 RLLEALTK 171
+ + K
Sbjct: 466 HSMTLMKK 473
>sp|Q9LJU2|PDI53_ARATH Protein disulfide-isomerase 5-3 OS=Arabidopsis thaliana GN=PDIL5-3
PE=2 SV=1
Length = 483
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 30/191 (15%)
Query: 2 QVYGVLDVQRVAGNFHISVH-GLNIYVAQMIFGGAKNVNVSHVIHDLSFG----PK---- 52
+V G + V++V GN IS H G + + + +N+SHV+ SFG P+
Sbjct: 295 RVEGYVRVKKVPGNLVISAHSGAHSF-------DSSQMNMSHVVSHFSFGRMISPRLLTD 347
Query: 53 ------YPGI-HNPLDGTVRMLHDTSG---TFKYYIKIVPTEY--RYISKDVLPTNQFSV 100
Y G+ H+ LDG + G T ++Y++ V TE R ++ ++
Sbjct: 348 MKRLLPYLGLSHDRLDGKAFINQHEFGANVTIEHYLQTVKTEVITRRSGQEHSLIEEYEY 407
Query: 101 TEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDR 160
T + S + P F ++LSP+ + I E +SF H IT LCA++GG F + G+LD
Sbjct: 408 TAHSSVAQTY--YLPVAKFHFELSPMQILITENPKSFSHFITNLCAIIGGVFTVAGILDS 465
Query: 161 WMYRLLEALTK 171
+ + + K
Sbjct: 466 IFHNTVRLVKK 476
>sp|Q69SA9|PDI54_ORYSJ Protein disulfide isomerase-like 5-4 OS=Oryza sativa subsp.
japonica GN=PDIL5-4 PE=2 SV=1
Length = 485
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 29/191 (15%)
Query: 2 QVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFG----------- 50
++ G + V++V G+ IS F ++ +NVSH + SFG
Sbjct: 296 RIEGFVRVKKVPGSVVISARS-----GSHSFDPSQ-INVSHYVTQFSFGKRLSAKMFNEL 349
Query: 51 ----PKYPGIHNPLDGTVRMLH----DTSGTFKYYIKIVPTEYRYI--SKDVLPTNQFSV 100
P G H+ L G ++ + + T ++Y++IV TE + SK++ ++
Sbjct: 350 KRLTPYVGGHHDRLAGQSYIVKHGDVNANVTIEHYLQIVKTELVTLRSSKELKLVEEYEY 409
Query: 101 TEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDR 160
T + S ++ F P V F ++ SP+ V + E +SF H IT +CA++GG F + G+LD
Sbjct: 410 TAHSSLVHSF--YVPVVKFHFEPSPMQVLVTELPKSFSHFITNVCAIIGGVFTVAGILDS 467
Query: 161 WMYRLLEALTK 171
+ L + K
Sbjct: 468 IFHNTLRLVKK 478
>sp|P39727|ERV46_YEAST ER-derived vesicles protein ERV46 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV46 PE=1 SV=2
Length = 415
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 91/207 (43%), Gaps = 41/207 (19%)
Query: 1 MQVYGVLDVQRVAGNFHIS-----VHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGP---- 51
++ G + R+ GN H + + + ++ N+N +H+I+ LSFG
Sbjct: 206 CRIKGSAQINRIQGNLHFAPGKPYQNAYGHFHDTSLYDKTSNLNFNHIINHLSFGKPIQS 265
Query: 52 ---------KYPGI---HNPLDGTVRMLHDTSGT----FKYYIKIVPTEYRYISKDVLPT 95
++ G +PLDG R + T F Y+ KIVPT Y Y+ V+ T
Sbjct: 266 HSKLLGNDKRHGGAVVATSPLDG--RQVFPDRNTHFHQFSYFAKIVPTRYEYLDNVVIET 323
Query: 96 NQFSVT------------EYFSTINEFDRTWPAVYFLYDLSPITVTIKEER-RSFLHLIT 142
QFS T ++ +T++ P ++ +++SP+ V KE+ +++ I
Sbjct: 324 AQFSATFHSRPLAGGRDKDHPNTLH-VRGGIPGMFVFFEMSPLKVINKEQHGQTWSGFIL 382
Query: 143 RLCAVLGGTFALTGMLDRWMYRLLEAL 169
+GG A+ ++D+ Y+ ++
Sbjct: 383 NCITSIGGVLAVGTVMDKLFYKAQRSI 409
>sp|Q5KYR3|IOLC_GEOKA 5-dehydro-2-deoxygluconokinase OS=Geobacillus kaustophilus (strain
HTA426) GN=iolC PE=3 SV=1
Length = 335
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 8/132 (6%)
Query: 38 VNVSHVIHDLS---FGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLP 94
++ SHVI D S G + I +P D ++ M D K + +Y +K +L
Sbjct: 85 IDTSHVITDKSGSVTGLAFTEIKSPTDCSILMYRDNVADLKLEPNDIDEDYIRRAKCLLI 144
Query: 95 TNQF-----SVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLG 149
+ S F ++ R V F D P T KEE + +L C V+
Sbjct: 145 SGTALAKSPSREAVFLALDYARRHGTVVVFDLDYRPYTWQSKEETAIYYNLAAEKCDVII 204
Query: 150 GTFALTGMLDRW 161
GT M++R+
Sbjct: 205 GTREEFDMMERF 216
>sp|A4IPB3|IOLC_GEOTN 5-dehydro-2-deoxygluconokinase OS=Geobacillus thermodenitrificans
(strain NG80-2) GN=iolC PE=3 SV=1
Length = 337
Score = 33.1 bits (74), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 8/132 (6%)
Query: 38 VNVSHVIHDLS---FGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLP 94
++ SHVI D S G + I +P D ++ M D K + +Y +K +L
Sbjct: 85 IDTSHVITDKSGSVTGLAFTEIKSPTDCSILMYRDNVADLKLEPNDIHEDYIRQAKCLLI 144
Query: 95 TNQF-----SVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLG 149
+ S F + R V+F D P T KEE + +L C V+
Sbjct: 145 SGTALAKSPSREAVFLALEYARRHGVVVFFDLDYRPYTWQSKEETAIYYNLAAEKCDVII 204
Query: 150 GTFALTGMLDRW 161
GT M++++
Sbjct: 205 GTREEFDMMEQF 216
>sp|B2IWK6|LPXC_NOSP7 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
GN=lpxC PE=3 SV=1
Length = 292
Score = 30.4 bits (67), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 55 GIHNPLDGTVRMLHDTSGTFKYYIK-------IVPTEYRYISKDVLPTNQFSVTEYFSTI 107
G+H+ ++ VR+L D +G+ +Y+++ I+P + +S VL T Y T+
Sbjct: 16 GLHSGVNTQVRILPDETGSGRYFVRVDLPDLPIIPAQVAAVSHTVLSTQLGKGEVYVRTV 75
Query: 108 N 108
Sbjct: 76 E 76
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.141 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,077,963
Number of Sequences: 539616
Number of extensions: 2912165
Number of successful extensions: 7043
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 6961
Number of HSP's gapped (non-prelim): 32
length of query: 179
length of database: 191,569,459
effective HSP length: 110
effective length of query: 69
effective length of database: 132,211,699
effective search space: 9122607231
effective search space used: 9122607231
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)