Query 030363
Match_columns 179
No_of_seqs 183 out of 1094
Neff 4.8
Searched_HMMs 46136
Date Fri Mar 29 12:36:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030363.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030363hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03006 carbonate dehydratase 100.0 5.7E-44 1.2E-48 313.1 9.6 168 1-178 2-170 (301)
2 PLN03014 carbonic anhydrase 100.0 9.9E-38 2.1E-42 277.7 11.7 135 40-178 83-218 (347)
3 PLN03019 carbonic anhydrase 100.0 1.9E-37 4.1E-42 274.5 10.8 136 39-178 77-213 (330)
4 PLN00416 carbonate dehydratase 100.0 1.4E-34 3.1E-39 249.3 11.2 133 39-178 5-138 (258)
5 PLN02154 carbonic anhydrase 99.9 6.6E-28 1.4E-32 210.9 10.6 108 67-178 57-164 (290)
6 COG0288 CynT Carbonic anhydras 99.9 6.2E-28 1.3E-32 202.1 8.6 88 88-178 2-90 (207)
7 PRK15219 carbonic anhydrase; P 99.9 1.9E-27 4.1E-32 203.7 9.4 88 84-178 51-141 (245)
8 PRK10437 carbonic anhydrase; P 99.9 2.4E-27 5.2E-32 200.5 8.8 87 89-178 3-89 (220)
9 cd00883 beta_CA_cladeA Carboni 99.9 1.8E-27 3.9E-32 194.8 7.4 79 97-178 1-79 (182)
10 cd00884 beta_CA_cladeB Carboni 99.9 4.7E-27 1E-31 194.2 7.3 83 96-178 1-85 (190)
11 cd03378 beta_CA_cladeC Carboni 99.9 1.2E-25 2.6E-30 181.0 8.7 87 86-178 1-90 (154)
12 KOG1578 Predicted carbonic anh 99.9 3.6E-24 7.7E-29 185.5 4.2 121 41-178 31-152 (276)
13 cd00382 beta_CA Carbonic anhyd 99.8 8.9E-21 1.9E-25 145.9 6.3 57 119-178 1-57 (119)
14 PF00484 Pro_CA: Carbonic anhy 99.8 4.5E-19 9.7E-24 139.2 4.4 53 123-178 1-53 (153)
15 cd03379 beta_CA_cladeD Carboni 99.7 1.8E-18 4E-23 136.4 5.6 54 119-178 1-54 (142)
16 KOG1578 Predicted carbonic anh 93.7 0.0024 5.1E-08 56.4 -5.6 65 93-160 3-83 (276)
No 1
>PLN03006 carbonate dehydratase
Probab=100.00 E-value=5.7e-44 Score=313.07 Aligned_cols=168 Identities=51% Similarity=0.822 Sum_probs=146.5
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCCCccceeCCCccccchhhhHHHHHHHhhhcc-ccccccccccchhhhhhhccccch
Q 030363 1 MAILAPASVSKDPLPSSSSALTPLRSSTQIFGPKFKFRQIGQTQLSLSTSFKKSS-GFKLKGWRHSEGITQEFQVDKLET 79 (179)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~~~~~~~-~~~~~a~~~~~~~t~eL~~~~~~~ 79 (179)
+|+|+++|||+|||+|+|+. +.+.....+|..+ ...|++||...+|++. +|+.+|++|++++|+||+....+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~- 74 (301)
T PLN03006 2 AATPTHFSVSHDPFSSTSLL--NLQTQAIFGPNHS----LKTTQLRIPASFRRKATNLQVMASGKTPGLTQEANGVAID- 74 (301)
T ss_pred CCCCCCcccccCCcchhhhh--ccCcceeecCCcc----cceeEecccccccccccchhhhhhhchHHHHHHHhhccCC-
Confidence 47899999999999999996 2233344445444 6668899999887754 88999999999999999865422
Q ss_pred hcccCCHHHHHHHHHHHHHHhhhhhcccChHHHhhhhcCCCCcEEEEeecCCCCCcccccCCCCCceeEEeecCCcCCCC
Q 030363 80 AAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPC 159 (179)
Q Consensus 80 ~~~~~~~~~~l~~Ll~gN~rF~~~~~~~~~~~~~~la~gQ~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNiGNiV~~~ 159 (179)
..++.+++++|++||.+|+..++..++++|+++++||+|+++||+||||||+|+.|||++|||+|||||+||+|+|+
T Consensus 75 ---~~~~~~~~~~L~~rf~~f~~~~~~~~~~~~~~La~GQ~P~~lvI~CsDSRV~Pe~Ifd~~pGDlFVVRNaGNiVpp~ 151 (301)
T PLN03006 75 ---RQNNTDVFDDMKQRFLAFKKLKYMDDFEHYKNLADAQAPKFLVIACADSRVCPSAVLGFQPGDAFTVRNIANLVPPY 151 (301)
T ss_pred ---CCCcccHHHHHHHHHHhchhhccccCHHHHHHhccCCCCCEEEEEeccCCCCHHHHhCCCCCCEEEEeccccccCCc
Confidence 23478999999999999999999899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcchHHHHHHHHHhhC
Q 030363 160 ESGPSETNAALEFAVNSVK 178 (179)
Q Consensus 160 d~~~~s~~AsLEYAV~~L~ 178 (179)
|.+..++.++|||||.+|+
T Consensus 152 d~~~~~~~aSLEYAV~~L~ 170 (301)
T PLN03006 152 ESGPTETKAALEFSVNTLN 170 (301)
T ss_pred cccccchhhhHHHHHHHhC
Confidence 8766779999999999997
No 2
>PLN03014 carbonic anhydrase
Probab=100.00 E-value=9.9e-38 Score=277.66 Aligned_cols=135 Identities=40% Similarity=0.652 Sum_probs=124.1
Q ss_pred hhhhHHHHHHHhhhccccccccccccchhhhhhhccccchhcccCCHHHHHHHHHHHHHHhhhhhcccChHHHhhhhcCC
Q 030363 40 IGQTQLSLSTSFKKSSGFKLKGWRHSEGITQEFQVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQ 119 (179)
Q Consensus 40 ~~~t~~~l~~~~~~~~~~~~~a~~~~~~~t~eL~~~~~~~~~~~~~~~~~l~~Ll~gN~rF~~~~~~~~~~~~~~la~gQ 119 (179)
+++++.+|+|||++|++|+.+|++|++++|+||+..... ...+++++++|++||++|+.+.+..++++|+++++||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~lerL~~GN~rF~~~~~~~~~~~~~~La~GQ 158 (347)
T PLN03014 83 YDEAIEALKKLLIEKEELKTVAAAKVEQITAALQTGTSS----DKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQ 158 (347)
T ss_pred HHHHHHHHHhhcccccccchHHHHhHHHHHHHHhcccCC----CCCCcCHHHHHHHHHHHHHhhccccCHHHHHhhccCC
Confidence 789999999999999999999999999999999963211 2356899999999999999998889999999999999
Q ss_pred CCcEEEEeecCCCCCcccccCCCCCceeEEeecCCcCCCCCCCC-cchHHHHHHHHHhhC
Q 030363 120 APKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVK 178 (179)
Q Consensus 120 ~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNiGNiV~~~d~~~-~s~~AsLEYAV~~L~ 178 (179)
+|+++||+||||||+|+.|||++|||+||+||+||+|+++|... .++.++|||||.+|+
T Consensus 159 ~P~alvI~CsDSRV~Pe~Ifd~~pGDlFVvRNaGNiV~~~d~~~~~~v~asLEYAV~~L~ 218 (347)
T PLN03014 159 SPKYMVFACSDSRVCPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLK 218 (347)
T ss_pred CCCEEEEEeccCCCCHHHHhCCCCCcEEEEeccccccCcccccccccchhHHHHHHHHhC
Confidence 99999999999999999999999999999999999999987543 468999999999997
No 3
>PLN03019 carbonic anhydrase
Probab=100.00 E-value=1.9e-37 Score=274.53 Aligned_cols=136 Identities=39% Similarity=0.644 Sum_probs=124.9
Q ss_pred chhhhHHHHHHHhhhccccccccccccchhhhhhhccccchhcccCCHHHHHHHHHHHHHHhhhhhcccChHHHhhhhcC
Q 030363 39 QIGQTQLSLSTSFKKSSGFKLKGWRHSEGITQEFQVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADG 118 (179)
Q Consensus 39 ~~~~t~~~l~~~~~~~~~~~~~a~~~~~~~t~eL~~~~~~~~~~~~~~~~~l~~Ll~gN~rF~~~~~~~~~~~~~~la~g 118 (179)
-+++++.+|+|+|++|++|+.+|++|++++|+||+..... ...+++++++|++||++|+.+.+..++++|+.+++|
T Consensus 77 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~ale~Ll~GN~rF~~~~~~~~p~~~~~La~g 152 (330)
T PLN03019 77 SYEDAIEALKKLLIEKDDLKDVAAAKVKKITAELQAASSS----DSKSFDPVERIKEGFVTFKKEKYETNPALYGELAKG 152 (330)
T ss_pred hHHHHHHHHHhhcccccccchHHHHHHHHhhHHhhhccCC----CCchhHHHHHHHHHHHHHHhccccccHHHHHhhccC
Confidence 3799999999999999999999999999999999974321 245799999999999999999888999999999999
Q ss_pred CCCcEEEEeecCCCCCcccccCCCCCceeEEeecCCcCCCCCCCC-cchHHHHHHHHHhhC
Q 030363 119 QAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVK 178 (179)
Q Consensus 119 Q~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNiGNiV~~~d~~~-~s~~AsLEYAV~~L~ 178 (179)
|+|+++||+||||||+|+.|||++|||+|||||+||+|+++|.+. +++.++|||||.+|+
T Consensus 153 Q~P~alvI~CsDSRV~Pe~Ifd~~pGDlFVvRNaGNiV~p~d~~~~~~v~aSIEYAV~~L~ 213 (330)
T PLN03019 153 QSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYAGVGAAIEYAVLHLK 213 (330)
T ss_pred CCCCEEEEEecccCCCHHHHhCCCCCceEEEeccccccCCcccccccccchhHHHHHHHhC
Confidence 999999999999999999999999999999999999999987543 578999999999997
No 4
>PLN00416 carbonate dehydratase
Probab=100.00 E-value=1.4e-34 Score=249.26 Aligned_cols=133 Identities=38% Similarity=0.648 Sum_probs=124.2
Q ss_pred chhhhHHHHHHHhhhccccccccccccchhhhhhhccccchhcccCCHHHHHHHHHHHHHHhhhhhcccChHHHhhhhcC
Q 030363 39 QIGQTQLSLSTSFKKSSGFKLKGWRHSEGITQEFQVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADG 118 (179)
Q Consensus 39 ~~~~t~~~l~~~~~~~~~~~~~a~~~~~~~t~eL~~~~~~~~~~~~~~~~~l~~Ll~gN~rF~~~~~~~~~~~~~~la~g 118 (179)
.+++....|.++|+.++.++.+++.+...++.+|++.. ..+.+++++|++||+||+.+++..++++|+.++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~al~~Ll~Gn~rF~~~~~~~~~~~~~~la~g 77 (258)
T PLN00416 5 SYEAAIKGLNDLLSTKADLGNVAAAKIKALTAELKELD-------SSNSDAIERIKTGFTQFKTEKYLKNSTLFNHLAKT 77 (258)
T ss_pred cHHHHHHHHHhhcccccccchHHHHhHHHHHHHHHHhh-------cCHHHHHHHHHHHHHHHHhcccccCHHHHHhhccC
Confidence 37889999999999999999999999999999999974 56889999999999999999888889999999999
Q ss_pred CCCcEEEEeecCCCCCcccccCCCCCceeEEeecCCcCCCCCCCC-cchHHHHHHHHHhhC
Q 030363 119 QAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVK 178 (179)
Q Consensus 119 Q~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNiGNiV~~~d~~~-~s~~AsLEYAV~~L~ 178 (179)
|+|+++||+||||||+|+.|||.+|||+||+||+||+|+++|... +++.++|||||.+|+
T Consensus 78 Q~P~alvI~CsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~d~~~~~~~~asLEyAv~~L~ 138 (258)
T PLN00416 78 QTPKFLVFACSDSRVCPSHILNFQPGEAFVVRNIANMVPPFDQKRHSGVGAAVEYAVVHLK 138 (258)
T ss_pred CCCCEEEEEecCCCCCHHHHcCCCCCCEEEEeccccccCCccccccccchhHHHHHHHHhC
Confidence 999999999999999999999999999999999999999987533 568999999999997
No 5
>PLN02154 carbonic anhydrase
Probab=99.95 E-value=6.6e-28 Score=210.88 Aligned_cols=108 Identities=58% Similarity=1.020 Sum_probs=95.4
Q ss_pred hhhhhhhccccchhcccCCHHHHHHHHHHHHHHhhhhhcccChHHHhhhhcCCCCcEEEEeecCCCCCcccccCCCCCce
Q 030363 67 GITQEFQVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEA 146 (179)
Q Consensus 67 ~~t~eL~~~~~~~~~~~~~~~~~l~~Ll~gN~rF~~~~~~~~~~~~~~la~gQ~P~~lvItCsDSRV~pe~If~~~pGDl 146 (179)
+.+.+|..... +.....+.+++|++||.+|+...+..++++|+.++.||+|+++||+|+||||+|+.|||++|||+
T Consensus 57 ~~~~~~~~~~~----~~~~~~~~l~~Ll~gf~~f~~~~~~~~~e~f~~La~GQ~P~~lvi~C~DSRV~pe~if~~~pGdl 132 (290)
T PLN02154 57 GIREEFMDLNR----ETETSYDFLDEMRHRFLKFKRQKYLPEIEKFKALAIAQSPKVMVIGCADSRVCPSYVLGFQPGEA 132 (290)
T ss_pred hhhHHHHhccc----CcchhHHHHHHHHHHHHHHhhccccccHHHHHHhccCCCCCEEEEEecCCCCCHHHHcCCCCCCE
Confidence 34555655432 23456688999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeecCCcCCCCCCCCcchHHHHHHHHHhhC
Q 030363 147 FIVRNVANMVPPCESGPSETNAALEFAVNSVK 178 (179)
Q Consensus 147 FVvRNiGNiV~~~d~~~~s~~AsLEYAV~~L~ 178 (179)
||+||+||+|++++.++.++.++|||||.+|+
T Consensus 133 FvvRN~GNiv~~~~~g~~~~~aslEyAv~~L~ 164 (290)
T PLN02154 133 FTIRNVANLVTPVQNGPTETNSALEFAVTTLQ 164 (290)
T ss_pred EEEeccCCccCCccCCccchhhHHHHHHHHhC
Confidence 99999999999987665789999999999997
No 6
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=99.95 E-value=6.2e-28 Score=202.10 Aligned_cols=88 Identities=34% Similarity=0.586 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHhhhhhcccChHHHhhhh-cCCCCcEEEEeecCCCCCcccccCCCCCceeEEeecCCcCCCCCCCCcch
Q 030363 88 DFFDKMKHRFLSFKKQKFMENLEHYQNLA-DGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSET 166 (179)
Q Consensus 88 ~~l~~Ll~gN~rF~~~~~~~~~~~~~~la-~gQ~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNiGNiV~~~d~~~~s~ 166 (179)
..++.|++||.+|.++.+..++.+|+.+. .+|+|+++||+||||||+||.|||++|||+||+||+||+|++++. ++
T Consensus 2 ~~~~~ll~gn~~f~~~~~~~~~~~~~~l~~~~Q~P~~lii~C~DSRv~~e~i~~~~pGdlfV~RNaGniV~~~~~---~~ 78 (207)
T COG0288 2 SALKDLLAGNQRFAEGKFPEQSALFRKLADKGQSPKALIITCSDSRVPPELITGLGPGDLFVIRNAGNIVTHPDG---SV 78 (207)
T ss_pred cHHHHHHHHHHHHHhcccccchHHHHHHhccCCCCcEEEEEEccCCCCHHHHhCCCCccEEEEeecccccCCCcc---ch
Confidence 57899999999999998888899998866 569999999999999999999999999999999999999998763 69
Q ss_pred HHHHHHHHHhhC
Q 030363 167 NAALEFAVNSVK 178 (179)
Q Consensus 167 ~AsLEYAV~~L~ 178 (179)
.++|||||.+||
T Consensus 79 l~sleyAv~~L~ 90 (207)
T COG0288 79 LRSLEYAVYVLG 90 (207)
T ss_pred hHHHHHHHHHcC
Confidence 999999999997
No 7
>PRK15219 carbonic anhydrase; Provisional
Probab=99.94 E-value=1.9e-27 Score=203.74 Aligned_cols=88 Identities=24% Similarity=0.295 Sum_probs=78.1
Q ss_pred CCHHHHHHHHHHHHHHhhhhhcccChHHH---hhhhcCCCCcEEEEeecCCCCCcccccCCCCCceeEEeecCCcCCCCC
Q 030363 84 ENECDFFDKMKHRFLSFKKQKFMENLEHY---QNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCE 160 (179)
Q Consensus 84 ~~~~~~l~~Ll~gN~rF~~~~~~~~~~~~---~~la~gQ~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNiGNiV~~~d 160 (179)
.+|.+++++|++||++|+++.+. .++++ ..+++||+|+++||+|||||||||.|||.+|||+||+||+||+|++.
T Consensus 51 ~~p~~al~~L~~GN~rF~~~~~~-~~~~~~~~~~la~gQ~P~a~vi~CsDSRV~pe~ifd~~~GdlFvvRnaGN~v~~~- 128 (245)
T PRK15219 51 MTPDQIIESLKQGNKRFRSGKPA-QHDYLAQKRASAAGQYPAAVILSCIDSRAPAEIILDTGIGETFNSRVAGNISNDD- 128 (245)
T ss_pred CCHHHHHHHHHHHHHHHHhcCcC-CchhhHHhhhhccCCCCeEEEEecccCCCCHHHHhCCCCCcEEEEeccccccCcc-
Confidence 56889999999999999998764 44433 34678999999999999999999999999999999999999999753
Q ss_pred CCCcchHHHHHHHHHhhC
Q 030363 161 SGPSETNAALEFAVNSVK 178 (179)
Q Consensus 161 ~~~~s~~AsLEYAV~~L~ 178 (179)
+.++|||||.+|+
T Consensus 129 -----~~~slEyAv~~L~ 141 (245)
T PRK15219 129 -----LLGSMEFACAVAG 141 (245)
T ss_pred -----hhhHHHHHHHHcC
Confidence 7899999999997
No 8
>PRK10437 carbonic anhydrase; Provisional
Probab=99.94 E-value=2.4e-27 Score=200.46 Aligned_cols=87 Identities=31% Similarity=0.536 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHhhhhhcccChHHHhhhhcCCCCcEEEEeecCCCCCcccccCCCCCceeEEeecCCcCCCCCCCCcchHH
Q 030363 89 FFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNA 168 (179)
Q Consensus 89 ~l~~Ll~gN~rF~~~~~~~~~~~~~~la~gQ~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNiGNiV~~~d~~~~s~~A 168 (179)
.+++|++||++|+...+..++++|+.++.+|+|+++||+||||||+|+.|||.+|||+||+||+||+|+++|. ++.+
T Consensus 3 ~~~~Ll~gN~~f~~~~~~~~~~~~~~~~~~q~p~~~~i~C~DSRv~p~~i~~~~~Gd~fv~Rn~gn~v~~~~~---~~~~ 79 (220)
T PRK10437 3 DIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDL---NCLS 79 (220)
T ss_pred hHHHHHHHHHHHHHhhhccChHHHHhcccCCCCCEEEEEecccCCCHHHhcCCCCCcEEEEeecccccCCCCc---chHH
Confidence 5789999999999988778999999999999999999999999999999999999999999999999998764 5899
Q ss_pred HHHHHHHhhC
Q 030363 169 ALEFAVNSVK 178 (179)
Q Consensus 169 sLEYAV~~L~ 178 (179)
+|||||.+|+
T Consensus 80 ~leyAV~~L~ 89 (220)
T PRK10437 80 VVQYAVDVLE 89 (220)
T ss_pred HHHHHHHHcC
Confidence 9999999997
No 9
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=99.94 E-value=1.8e-27 Score=194.77 Aligned_cols=79 Identities=37% Similarity=0.698 Sum_probs=75.0
Q ss_pred HHHhhhhhcccChHHHhhhhcCCCCcEEEEeecCCCCCcccccCCCCCceeEEeecCCcCCCCCCCCcchHHHHHHHHHh
Q 030363 97 FLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNS 176 (179)
Q Consensus 97 N~rF~~~~~~~~~~~~~~la~gQ~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNiGNiV~~~d~~~~s~~AsLEYAV~~ 176 (179)
|++|+...+.+++++|+.+.++|+|+++||+||||||+|+.|||.+|||+||+||+||+|+++|. ++.++|||||.+
T Consensus 1 n~~f~~~~~~~~~~~~~~l~~gQ~P~~~vi~CsDSRv~pe~if~~~~GdlFViRnaGN~v~~~~~---~~~asleyAv~~ 77 (182)
T cd00883 1 NRAWAEEKKAKDPDFFPRLAKGQTPEYLWIGCSDSRVPENTILGLLPGEVFVHRNIANLVSPTDL---NCLSVLQYAVDV 77 (182)
T ss_pred ChhhhhhccccCHHHHHHhhcCCCCCEEEEEecCCCCCHHHhcCCCCCCEEEEEeeccccCCCCc---chhhhHHHHHHh
Confidence 67899988889999999999999999999999999999999999999999999999999999864 699999999999
Q ss_pred hC
Q 030363 177 VK 178 (179)
Q Consensus 177 L~ 178 (179)
||
T Consensus 78 L~ 79 (182)
T cd00883 78 LK 79 (182)
T ss_pred cC
Confidence 97
No 10
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=99.94 E-value=4.7e-27 Score=194.24 Aligned_cols=83 Identities=52% Similarity=0.823 Sum_probs=77.2
Q ss_pred HHHHhhhhhcccChHHHhhhhcCCCCcEEEEeecCCCCCcccccCCCCCceeEEeecCCcCCCCCC--CCcchHHHHHHH
Q 030363 96 RFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCES--GPSETNAALEFA 173 (179)
Q Consensus 96 gN~rF~~~~~~~~~~~~~~la~gQ~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNiGNiV~~~d~--~~~s~~AsLEYA 173 (179)
||++|+...+..++++|++++.||+|+++||+||||||+|+.||+.+|||+||+||+||+|++++. ...++.++||||
T Consensus 1 G~~~f~~~~~~~~~~~~~~l~~gQ~P~~~~i~C~DsRv~~~~i~~~~~Gd~fv~Rn~gn~v~~~~~~~~~~~~~asleya 80 (190)
T cd00884 1 GFRRFRKEYFPEERELFEKLAKGQSPKALFIACSDSRVVPALITQTQPGELFVVRNVGNLVPPYEPDGGFHGTSAAIEYA 80 (190)
T ss_pred ChHHHHhhhhhhhHHHHHHhccCCCCCeEEEeeeCCCCCHHHHcCCCCCCEEEEeccCCcCCcccccccccchhhhHHHH
Confidence 689999988888999999999999999999999999999999999999999999999999999764 236799999999
Q ss_pred HHhhC
Q 030363 174 VNSVK 178 (179)
Q Consensus 174 V~~L~ 178 (179)
|.+|+
T Consensus 81 v~~l~ 85 (190)
T cd00884 81 VAVLK 85 (190)
T ss_pred HHHhC
Confidence 99997
No 11
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=99.92 E-value=1.2e-25 Score=180.98 Aligned_cols=87 Identities=30% Similarity=0.496 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHhhhhhcc---cChHHHhhhhcCCCCcEEEEeecCCCCCcccccCCCCCceeEEeecCCcCCCCCCC
Q 030363 86 ECDFFDKMKHRFLSFKKQKFM---ENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESG 162 (179)
Q Consensus 86 ~~~~l~~Ll~gN~rF~~~~~~---~~~~~~~~la~gQ~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNiGNiV~~~d~~ 162 (179)
|.+++++|++||++|.++.+. ..++.|..++++|+|+++||+||||||+|+.+|+.+|||+||+||+||+|++
T Consensus 1 p~~~~~~Ll~gN~~f~~~~~~~~~~~~~~~~~l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fviRn~gn~v~~---- 76 (154)
T cd03378 1 PDEALERLKEGNKRFVSGKPLHPDQDLARRRELAKGQKPFAVILSCSDSRVPPEIIFDQGLGDLFVVRVAGNIVDD---- 76 (154)
T ss_pred ChHHHHHHHHHHHHHHhcCccCccccHHHHHHhccCCCCcEEEEEcCCCCCCHHHHcCCCCCCEEEEeccccccCh----
Confidence 357899999999999987532 1256688899999999999999999999999999999999999999999987
Q ss_pred CcchHHHHHHHHHhhC
Q 030363 163 PSETNAALEFAVNSVK 178 (179)
Q Consensus 163 ~~s~~AsLEYAV~~L~ 178 (179)
++.++|||||.+|+
T Consensus 77 --~~~~sl~yav~~l~ 90 (154)
T cd03378 77 --DVLGSLEYAVEVLG 90 (154)
T ss_pred --hHHHHHHHHHHHhC
Confidence 37999999999987
No 12
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism]
Probab=99.89 E-value=3.6e-24 Score=185.55 Aligned_cols=121 Identities=31% Similarity=0.491 Sum_probs=108.6
Q ss_pred hhhHHHHHHHhhhccccccccccccchhhhhhhccccchhcccCCHHHHHHHHHHHHHHhhhhhcccChHHHhhhhcCCC
Q 030363 41 GQTQLSLSTSFKKSSGFKLKGWRHSEGITQEFQVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQA 120 (179)
Q Consensus 41 ~~t~~~l~~~~~~~~~~~~~a~~~~~~~t~eL~~~~~~~~~~~~~~~~~l~~Ll~gN~rF~~~~~~~~~~~~~~la~gQ~ 120 (179)
+-..-.+.++|..+.++ +|++++.++|++ .+.+++++++|..|..+++..+|.+|..++++|+
T Consensus 31 ~~~~~~dsrml~~r~~~--~~~~~~~~~~~~---------------~~~~~~i~~~Fv~~~~~~~~~~p~~f~~~~~~qs 93 (276)
T KOG1578|consen 31 VMFTCMDSRMLPTRYNL--VAAAKIKKLTAE---------------FDTLEDIGDMFVVRNSGNYIPNPTLFGALAKSQS 93 (276)
T ss_pred HHHHHHHhhccchhhhh--hhhhhhhhhhhc---------------cchHHHHHhhHhhhccccCCCChhhhHHHhccCC
Confidence 34445566777777777 889999999883 2588999999999999999999999999999999
Q ss_pred CcEEEEeecCCCCCcccccCCCCCceeEEeecCCcCCCCCCCC-cchHHHHHHHHHhhC
Q 030363 121 PKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVK 178 (179)
Q Consensus 121 P~~lvItCsDSRV~pe~If~~~pGDlFVvRNiGNiV~~~d~~~-~s~~AsLEYAV~~L~ 178 (179)
|+++||+|+||||+|++|++++|||.|++||++|+|+|.|..+ .++.|+|||||.+|+
T Consensus 94 p~~l~i~csdsRv~~shIL~~~pge~f~irniaNlv~p~~~~~~~~~~AalE~aV~~lk 152 (276)
T KOG1578|consen 94 PEPLALECSDSRVCISHILVCGPGECFAIRNIANLVPPPDKSKPTNVGAALEYAVTTLK 152 (276)
T ss_pred CcceEEEeccccCCCceEEEecCchHhHHHHHHhccCcccccCcccccchHHHHHHHhc
Confidence 9999999999999999999999999999999999999988765 789999999999997
No 13
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=99.82 E-value=8.9e-21 Score=145.92 Aligned_cols=57 Identities=47% Similarity=0.877 Sum_probs=54.2
Q ss_pred CCCcEEEEeecCCCCCcccccCCCCCceeEEeecCCcCCCCCCCCcchHHHHHHHHHhhC
Q 030363 119 QAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSVK 178 (179)
Q Consensus 119 Q~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNiGNiV~~~d~~~~s~~AsLEYAV~~L~ 178 (179)
|+|+++||+|||||++|+.+||++|||+||+||+||+|++.+. ++.++||||+.+|+
T Consensus 1 q~p~~~vltC~DsRv~~~~~~~~~~Gd~fv~Rn~Gn~v~~~~~---~~~~sl~~av~~l~ 57 (119)
T cd00382 1 QKPKALIIGCSDSRVPPELIFGLGPGDLFVVRNAGNLVPPYDL---DVLASLEYAVEVLG 57 (119)
T ss_pred CCCeEEEEEeeCCCCCHHHHhCCCCCCEEEEeccCCcCCCCcc---cHHHHHHHHHHhhC
Confidence 7999999999999999999999999999999999999998764 69999999999987
No 14
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=99.76 E-value=4.5e-19 Score=139.18 Aligned_cols=53 Identities=45% Similarity=0.852 Sum_probs=45.3
Q ss_pred EEEEeecCCCCCcccccCCCCCceeEEeecCCcCCCCCCCCcchHHHHHHHHHhhC
Q 030363 123 FMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSVK 178 (179)
Q Consensus 123 ~lvItCsDSRV~pe~If~~~pGDlFVvRNiGNiV~~~d~~~~s~~AsLEYAV~~L~ 178 (179)
++||+|||||++|+.+|+.+|||+||+||+||+|++.+. ++.++|||||.+|+
T Consensus 1 a~vi~C~DsR~~~~~~~~~~~Gd~fviRnaGn~v~~~~~---~~~~sle~av~~l~ 53 (153)
T PF00484_consen 1 ALVITCSDSRVPPEEIFGLKPGDLFVIRNAGNRVPPPDD---SALASLEYAVYHLG 53 (153)
T ss_dssp EEEEEETTTTSTHHHHHTS-TTSEEEEEETTG---TT-H---HHHHHHHHHHHTST
T ss_pred CEEEEEcCCCCCHHHHhCCCCcceeeeeEEeeecCcccc---chhhheeeeeecCC
Confidence 589999999999999999999999999999999988753 69999999999986
No 15
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=99.74 E-value=1.8e-18 Score=136.41 Aligned_cols=54 Identities=28% Similarity=0.472 Sum_probs=50.6
Q ss_pred CCCcEEEEeecCCCCCcccccCCCCCceeEEeecCCcCCCCCCCCcchHHHHHHHHHhhC
Q 030363 119 QAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSVK 178 (179)
Q Consensus 119 Q~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNiGNiV~~~d~~~~s~~AsLEYAV~~L~ 178 (179)
+.++++||+||||||+|+.+||.+|||+||+||+||+|++. +.++||||+.+|+
T Consensus 1 ~~~~~~vitC~DsRv~~e~i~~~~~GdlfviRnaGn~V~~~------~~~sl~~av~~l~ 54 (142)
T cd03379 1 PARKLAIVTCMDARLDPEKALGLKLGDAKVIRNAGGRVTDD------AIRSLVVSVYLLG 54 (142)
T ss_pred CCceEEEEEEeCCCCCHHHHcCCCCCcEEEEeccCCccCHh------HHHHHHHHHHHhC
Confidence 36789999999999999999999999999999999999873 7899999999987
No 16
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism]
Probab=93.68 E-value=0.0024 Score=56.39 Aligned_cols=65 Identities=23% Similarity=0.440 Sum_probs=51.7
Q ss_pred HHHHHHHhhhhhcccChHHHhhhhcCCCCcEEEEeecCCCCCcccc----------------cCCCCCceeEEeecCCcC
Q 030363 93 MKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNI----------------LGFQPGEAFIVRNVANMV 156 (179)
Q Consensus 93 Ll~gN~rF~~~~~~~~~~~~~~la~gQ~P~~lvItCsDSRV~pe~I----------------f~~~pGDlFVvRNiGNiV 156 (179)
|+.|..+|+...+.. +-.++..-++|.+..++|+|||.-|..- +..+.||.|++||.||..
T Consensus 3 i~~~~~~~~~t~~~~---~~~~~~~mp~~~~~~~~~~dsrml~~r~~~~~~~~~~~~~~~~~~~~~i~~~Fv~~~~~~~~ 79 (276)
T KOG1578|consen 3 ILRGVIRFRNTTRKD---LVEEIRDMPSPTAVMFTCMDSRMLPTRYNLVAAAKIKKLTAEFDTLEDIGDMFVVRNSGNYI 79 (276)
T ss_pred cccccchhhhhhHHH---hHHHHHhCCCHHHHHHHHHHhhccchhhhhhhhhhhhhhhhccchHHHHHhhHhhhccccCC
Confidence 566777888775432 2255666679999999999999999776 566889999999999999
Q ss_pred CCCC
Q 030363 157 PPCE 160 (179)
Q Consensus 157 ~~~d 160 (179)
|.-.
T Consensus 80 ~~p~ 83 (276)
T KOG1578|consen 80 PNPT 83 (276)
T ss_pred CChh
Confidence 8753
Done!