BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030364
(178 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P31583|RHN1_NICPL Ras-related protein RHN1 OS=Nicotiana plumbaginifolia GN=RHN1 PE=2
SV=1
Length = 200
Score = 270 bits (691), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 122/168 (72%), Positives = 144/168 (85%)
Query: 1 MARTSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIK 60
MA +S+ N+ KLVLLGDMG GK+SLV+RFVKGQF +FQESTIGAAFF+ L++N T+K
Sbjct: 1 MASSSHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAVNNATVK 60
Query: 61 FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFL 120
F+IWDTAGQERYHSLAPMYYRGAAAA++VYDITS DSF RAKKWVQELQ+QGNPN++M L
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMAL 120
Query: 121 VANKVDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
NK DLE++RKV EE LYA+ENGL F+ETSAK+A NVN +FYEI
Sbjct: 121 AGNKADLEDRRKVTAEEARLYAEENGLFFMETSAKTAVNVNAIFYEIA 168
>sp|P29687|RAB5_TOBAC Ras-related protein Rab5 OS=Nicotiana tabacum GN=RAB5 PE=2 SV=1
Length = 200
Score = 265 bits (678), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 120/168 (71%), Positives = 142/168 (84%)
Query: 1 MARTSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIK 60
MA + N+ KLVLLGDMG GK+SLV+RFVKGQF +FQESTIGAAFF+ +S+N T+K
Sbjct: 1 MASRRHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNATVK 60
Query: 61 FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFL 120
F+IWDTAGQERYHSLAPMYYRGAAAA++VYDITS +S RAKKWVQELQ+QGNPN++M L
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESLARAKKWVQELQKQGNPNMVMAL 120
Query: 121 VANKVDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
NK DLE+KRKV EE LYA+ENGL F+ETSAK+A NVN++FYEI
Sbjct: 121 AGNKADLEDKRKVTAEEARLYAEENGLFFMETSAKTATNVNDIFYEIA 168
>sp|P31582|RAF2A_ARATH Ras-related protein RABF2a OS=Arabidopsis thaliana GN=RABF2A PE=1
SV=1
Length = 200
Score = 262 bits (669), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 120/168 (71%), Positives = 142/168 (84%)
Query: 1 MARTSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIK 60
MA + NKNI KLVLLGD+G GK+SLVLRFVK QF +FQESTIGAAFF+Q L++N+ T+K
Sbjct: 1 MASSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFL 120
F+IWDTAGQERYHSLAPMYYRGAAAA++V+DIT+ SFERAKKWVQELQ QGNPN++M L
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMAL 120
Query: 121 VANKVDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
NK DL + RKV EE E+YAQEN L F+ETSAK+A NV ++FYEI
Sbjct: 121 AGNKADLLDARKVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIA 168
>sp|Q9SN68|RAF2B_ARATH Ras-related protein RABF2b OS=Arabidopsis thaliana GN=RABF2B PE=1
SV=1
Length = 200
Score = 257 bits (657), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 118/168 (70%), Positives = 141/168 (83%)
Query: 1 MARTSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIK 60
MA NK+I KLVLLGD+G GK+SLVLRFVK QF +FQESTIGAAFF+Q L++N+ T+K
Sbjct: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFL 120
F+IWDTAGQERYHSLAPMYYRGAAAA++V+D+T+ SFERAKKWVQELQ QGNPN++M L
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120
Query: 121 VANKVDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
NK DL + RKV E+ + YAQENGL F+ETSAK+A NV E+FYEI
Sbjct: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIA 168
>sp|Q86JP3|RAB5A_DICDI Ras-related protein Rab-5A OS=Dictyostelium discoideum GN=rab5A
PE=3 SV=1
Length = 201
Score = 240 bits (613), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 111/164 (67%), Positives = 134/164 (81%)
Query: 5 SNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIW 64
+NK Q KLVLLG+ GK+SLVLRFV+G F D+QESTIGAAF Q + LN+ T+KF+IW
Sbjct: 4 NNKIFQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFEIW 63
Query: 65 DTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANK 124
DTAGQERYH+LAPMYYRGA AA+VVYDI S DSFERA KWV+ELQRQG+PN+++ L NK
Sbjct: 64 DTAGQERYHTLAPMYYRGAQAAIVVYDIRSEDSFERAIKWVKELQRQGSPNIVIALAGNK 123
Query: 125 VDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
+DL KRKV+ E + YA+ENGL F+ETSAK++ NVNELF EI
Sbjct: 124 LDLAAKRKVETAEAQQYAEENGLLFMETSAKTSQNVNELFVEIA 167
>sp|Q58DS9|RAB5C_BOVIN Ras-related protein Rab-5C OS=Bos taurus GN=RAB5C PE=2 SV=1
Length = 216
Score = 231 bits (588), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 106/162 (65%), Positives = 131/162 (80%)
Query: 6 NKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWD 65
NK Q KLVLLG+ GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWD
Sbjct: 17 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 66 TAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKV 125
TAGQERYHSLAPMYYRGA AA+VVYDIT+ D+F RAK WV+ELQRQ +PN+++ L NK
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKA 136
Query: 126 DLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEI 167
DL KR V+ +E + YA++N L F+ETSAK+A NVNE+F I
Sbjct: 137 DLASKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAI 178
>sp|P35278|RAB5C_MOUSE Ras-related protein Rab-5C OS=Mus musculus GN=Rab5c PE=1 SV=2
Length = 216
Score = 230 bits (587), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 106/162 (65%), Positives = 130/162 (80%)
Query: 6 NKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWD 65
NK Q KLVLLG+ GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWD
Sbjct: 17 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 66 TAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKV 125
TAGQERYHSLAPMYYRGA AA+VVYDIT+ D+F RAK WV+ELQRQ +PN+++ L NK
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKA 136
Query: 126 DLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEI 167
DL KR V+ +E + YA +N L F+ETSAK+A NVNE+F I
Sbjct: 137 DLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAI 178
>sp|P51147|RAB5C_CANFA Ras-related protein Rab-5C OS=Canis familiaris GN=RAB5C PE=2 SV=1
Length = 216
Score = 230 bits (587), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 106/163 (65%), Positives = 130/163 (79%)
Query: 6 NKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWD 65
NK Q KLVLLG+ GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWD
Sbjct: 17 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 66 TAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKV 125
TAGQERYHSLAPMYYRGA AA+VVYDIT+ D+F RAK WV+ELQRQ +PN+++ L NK
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKA 136
Query: 126 DLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
DL KR V+ +E + YA +N L F+ETSAK+A NVNE+F I
Sbjct: 137 DLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIA 179
>sp|Q5R7L7|RAB5C_PONAB Ras-related protein Rab-5C OS=Pongo abelii GN=RAB5C PE=2 SV=1
Length = 216
Score = 230 bits (586), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 106/162 (65%), Positives = 130/162 (80%)
Query: 6 NKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWD 65
NK Q KLVLLG+ GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWD
Sbjct: 17 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 66 TAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKV 125
TAGQERYHSLAPMYYRGA AA+VVYDIT+ D+F RAK WV+ELQRQ +PN+++ L NK
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKA 136
Query: 126 DLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEI 167
DL KR V+ +E + YA +N L F+ETSAK+A NVNE+F I
Sbjct: 137 DLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAI 178
>sp|P51148|RAB5C_HUMAN Ras-related protein Rab-5C OS=Homo sapiens GN=RAB5C PE=1 SV=2
Length = 216
Score = 230 bits (586), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 106/162 (65%), Positives = 130/162 (80%)
Query: 6 NKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWD 65
NK Q KLVLLG+ GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWD
Sbjct: 17 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 66 TAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKV 125
TAGQERYHSLAPMYYRGA AA+VVYDIT+ D+F RAK WV+ELQRQ +PN+++ L NK
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKA 136
Query: 126 DLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEI 167
DL KR V+ +E + YA +N L F+ETSAK+A NVNE+F I
Sbjct: 137 DLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAI 178
>sp|P61271|RAB5A_MACFA Ras-related protein Rab-5A OS=Macaca fascicularis GN=RAB5A PE=2
SV=1
Length = 215
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/165 (64%), Positives = 130/165 (78%)
Query: 4 TSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDI 63
T NK Q KLVLLG+ GK+SLVLRFVKGQF +FQESTIGAAF TQ + L++ T+KF+I
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVAN 123
WDTAGQERYHSLAPMYYRGA AA+VVYDIT+ +SF RAK WV+ELQRQ +PN+++ L N
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KVDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
K DL KR V +E + YA +N L F+ETSAK++ NVNE+F I
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIA 178
>sp|P20339|RAB5A_HUMAN Ras-related protein Rab-5A OS=Homo sapiens GN=RAB5A PE=1 SV=2
Length = 215
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/165 (64%), Positives = 130/165 (78%)
Query: 4 TSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDI 63
T NK Q KLVLLG+ GK+SLVLRFVKGQF +FQESTIGAAF TQ + L++ T+KF+I
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVAN 123
WDTAGQERYHSLAPMYYRGA AA+VVYDIT+ +SF RAK WV+ELQRQ +PN+++ L N
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KVDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
K DL KR V +E + YA +N L F+ETSAK++ NVNE+F I
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIA 178
>sp|P18066|RAB5A_CANFA Ras-related protein Rab-5A OS=Canis familiaris GN=RAB5A PE=1 SV=1
Length = 215
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/165 (64%), Positives = 130/165 (78%)
Query: 4 TSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDI 63
T NK Q KLVLLG+ GK+SLVLRFVKGQF +FQESTIGAAF TQ + L++ T+KF+I
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVAN 123
WDTAGQERYHSLAPMYYRGA AA+VVYDIT+ +SF RAK WV+ELQRQ +PN+++ L N
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KVDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
K DL KR V +E + YA +N L F+ETSAK++ NVNE+F I
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIA 178
>sp|Q0IIG7|RAB5A_BOVIN Ras-related protein Rab-5A OS=Bos taurus GN=RAB5A PE=2 SV=1
Length = 215
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/165 (64%), Positives = 130/165 (78%)
Query: 4 TSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDI 63
T NK Q KLVLLG+ GK+SLVLRFVKGQF +FQESTIGAAF TQ + L++ T+KF+I
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVAN 123
WDTAGQERYHSLAPMYYRGA AA+VVYDIT+ +SF RAK WV+ELQRQ +PN+++ L N
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KVDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
K DL KR V +E + YA +N L F+ETSAK++ NVNE+F I
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIA 178
>sp|Q9CQD1|RAB5A_MOUSE Ras-related protein Rab-5A OS=Mus musculus GN=Rab5a PE=1 SV=1
Length = 215
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/165 (64%), Positives = 130/165 (78%)
Query: 4 TSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDI 63
T NK Q KLVLLG+ GK+SLVLRFVKGQF +FQESTIGAAF TQ + L++ T+KF+I
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVAN 123
WDTAGQERYHSLAPMYYRGA AA+VVYDIT+ +SF RAK WV+ELQRQ +PN+++ L N
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KVDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
K DL KR V +E + YA +N L F+ETSAK++ NVNE+F I
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIA 178
>sp|Q06AU6|RAB5A_PIG Ras-related protein Rab-5A OS=Sus scrofa GN=RAB5A PE=2 SV=1
Length = 215
Score = 228 bits (581), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 107/165 (64%), Positives = 130/165 (78%)
Query: 4 TSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDI 63
T NK Q KLVLLG+ GK+SLVLRFVKGQF +FQESTIGAAF TQ + L++ T+KF+I
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVAN 123
WDTAGQERYHSLAPMYYRGA AA+VVYDIT+ +SF RAK WV+ELQRQ +PN+++ L N
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KVDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
K DL KR V +E + YA +N L F+ETSAK++ NVNE+F I
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIA 178
>sp|Q98932|RAB5C_CHICK Ras-related protein Rab-5C OS=Gallus gallus GN=RAB5C PE=1 SV=1
Length = 216
Score = 227 bits (578), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 105/162 (64%), Positives = 129/162 (79%)
Query: 6 NKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWD 65
NK Q KLVLLG+ GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWD
Sbjct: 17 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 66 TAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKV 125
TAGQERYHSLAPMYYRGA AA+VVYDIT+ D+F RAK WV+ELQRQ +PN+++ L NK
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKA 136
Query: 126 DLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEI 167
DL KR V ++ + YA +N L F+ETSAK+A NVNE+F I
Sbjct: 137 DLATKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAI 178
>sp|Q5ZHW4|RAB5B_CHICK Ras-related protein Rab-5B OS=Gallus gallus GN=RAB5B PE=2 SV=1
Length = 215
Score = 226 bits (576), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 131/164 (79%)
Query: 5 SNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIW 64
++K Q KLVLLG+ GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 65 DTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANK 124
DTAGQERYHSLAPMYYRGA AA+VVYDIT+ ++F RAK WV+ELQRQ +P++++ L NK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 125 VDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
DL KR V+ EE + YA +N L F+ETSAK+A NVN+LF I
Sbjct: 135 ADLASKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIA 178
>sp|Q5RBG1|RAB5B_PONAB Ras-related protein Rab-5B OS=Pongo abelii GN=RAB5B PE=2 SV=1
Length = 215
Score = 225 bits (574), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 131/164 (79%)
Query: 5 SNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIW 64
++K Q KLVLLG+ GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 65 DTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANK 124
DTAGQERYHSLAPMYYRGA AA+VVYDIT+ ++F RAK WV+ELQRQ +P++++ L NK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 125 VDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
DL KR V+ EE + YA +N L F+ETSAK+A NVN+LF I
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIA 178
>sp|P61021|RAB5B_MOUSE Ras-related protein Rab-5B OS=Mus musculus GN=Rab5b PE=1 SV=1
Length = 215
Score = 225 bits (574), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 131/164 (79%)
Query: 5 SNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIW 64
++K Q KLVLLG+ GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 65 DTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANK 124
DTAGQERYHSLAPMYYRGA AA+VVYDIT+ ++F RAK WV+ELQRQ +P++++ L NK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 125 VDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
DL KR V+ EE + YA +N L F+ETSAK+A NVN+LF I
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIA 178
>sp|P61020|RAB5B_HUMAN Ras-related protein Rab-5B OS=Homo sapiens GN=RAB5B PE=1 SV=1
Length = 215
Score = 225 bits (574), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 131/164 (79%)
Query: 5 SNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIW 64
++K Q KLVLLG+ GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 65 DTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANK 124
DTAGQERYHSLAPMYYRGA AA+VVYDIT+ ++F RAK WV+ELQRQ +P++++ L NK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 125 VDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
DL KR V+ EE + YA +N L F+ETSAK+A NVN+LF I
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIA 178
>sp|Q9CB01|RABF1_ARATH Ras-related protein RABF1 OS=Arabidopsis thaliana GN=RABF1 PE=1
SV=1
Length = 202
Score = 212 bits (540), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 96/163 (58%), Positives = 132/163 (80%), Gaps = 1/163 (0%)
Query: 7 KNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNE-VTIKFDIWD 65
KN++VKLVLLGD G GK+ +VLRFV+GQF + T+GA+F +Q ++L + T+KF+IWD
Sbjct: 30 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWD 89
Query: 66 TAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKV 125
TAGQERY +LAP+YYRGA AV+VYDITS +SF++A+ WV+ELQ+ G+P+++M LV NK
Sbjct: 90 TAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKA 149
Query: 126 DLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
DL EKR+V E+G A++NG+ F+ETSAK+A N+N+LF EIG
Sbjct: 150 DLHEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFEEIG 192
>sp|P36017|VPS21_YEAST Vacuolar protein sorting-associated protein 21 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS21 PE=1
SV=1
Length = 210
Score = 189 bits (480), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 91/162 (56%), Positives = 121/162 (74%), Gaps = 3/162 (1%)
Query: 11 VKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQE 70
+KLVLLG+ GK+S+VLRFV F + +E TIGAAF TQ +++NE T+KF+IWDTAGQE
Sbjct: 8 IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQE 67
Query: 71 RYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEE- 129
R+ SLAPMYYR A AA+VVYD+T SF +A+ WV+EL Q + ++I+ LV NK+D+ +
Sbjct: 68 RFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQE 127
Query: 130 --KRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIGD 169
+RKV EEGE A+E GL F ETSAK+ NVN++F IG+
Sbjct: 128 GGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGE 169
>sp|P36586|YPT5_SCHPO GTP-binding protein ypt5 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt5 PE=1 SV=1
Length = 211
Score = 186 bits (471), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 101/170 (59%), Positives = 122/170 (71%), Gaps = 5/170 (2%)
Query: 4 TSNKN---IQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVT-I 59
T+ KN I KLVLLGD GK+SLVLRFVK QF D++ESTIGAAF TQ L ++E T +
Sbjct: 5 TAPKNVVTINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSV 64
Query: 60 KFDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMF 119
K +IWDTAGQERY SLAPMYYR A A+VVYDIT S E+AK W++ELQRQ +++
Sbjct: 65 KLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIA 124
Query: 120 LVANKVDL-EEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
L NK+DL +E+R V+ + E YA E L F ETSAK+A NVNELF I
Sbjct: 125 LAGNKLDLAQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIA 174
>sp|Q54RX9|RAB5B_DICDI Putative ras-related protein Rab-5B OS=Dictyostelium discoideum
GN=rab5B PE=5 SV=1
Length = 214
Score = 173 bits (439), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 111/157 (70%), Gaps = 3/157 (1%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
KLVLLG+M TGKT + R V+ +F +STIGAAF + + ++ + IK +IWDTAGQER
Sbjct: 51 KLVLLGEMNTGKTCISSRLVRNEFGP-TDSTIGAAFLVKSMVVDNINIKLEIWDTAGQER 109
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
Y SL PMYYRGAAAAVVVYDIT ++FE K+WV ELQ+ +PNLI+ L NKVDL R
Sbjct: 110 YRSLTPMYYRGAAAAVVVYDITKKNTFETLKRWVSELQKHASPNLILALAGNKVDL-PNR 168
Query: 132 KVKNEEGELYAQENGLS-FLETSAKSAHNVNELFYEI 167
+V+ +E Y E G + F ETSA S N+NELF EI
Sbjct: 169 EVQVDEVNRYISELGNAIFFETSAASGQNINELFTEI 205
>sp|P36018|YPT52_YEAST GTP-binding protein YPT52 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT52 PE=1 SV=1
Length = 234
Score = 173 bits (439), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 126/190 (66%), Gaps = 29/190 (15%)
Query: 9 IQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLN--------EVTIK 60
+Q KLVLLGD GK+S+V RFVK F + +ESTIGAAF +Q ++++ +V IK
Sbjct: 2 LQFKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNETKDVVIK 61
Query: 61 FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQ-GNPNLIMF 119
F+IWDTAGQERY SLAPMYYR A AA+VVYDIT DS ++A+ WV EL+ + G+ +L+++
Sbjct: 62 FEIWDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIY 121
Query: 120 LVANKVDL-----------------EEKRKVK---NEEGELYAQENGLSFLETSAKSAHN 159
L+ NKVDL +E++KV+ EE + YAQE GL F E SAK+
Sbjct: 122 LLGNKVDLCQETPSTETSPDSNEGGDEEQKVRAISTEEAKQYAQEQGLLFREVSAKTGEG 181
Query: 160 VNELFYEIGD 169
V E+F +IG+
Sbjct: 182 VKEIFQDIGE 191
>sp|Q921E2|RAB31_MOUSE Ras-related protein Rab-31 OS=Mus musculus GN=Rab31 PE=1 SV=1
Length = 194
Score = 169 bits (429), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 108/158 (68%)
Query: 10 QVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQ 69
++K+ LLGD G GK+S+V RFV+ F TIGA+F T+ + KF IWDTAGQ
Sbjct: 5 ELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQ 64
Query: 70 ERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEE 129
ER+HSLAPMYYRG+AAAV+VYDIT DSF KKWV+EL+ G N++M + NK DL +
Sbjct: 65 ERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSD 124
Query: 130 KRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEI 167
R+V ++ + YA+ G +ETSAK+A N+ ELF I
Sbjct: 125 IREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGI 162
>sp|Q6GQP4|RAB31_RAT Ras-related protein Rab-31 OS=Rattus norvegicus GN=Rab31 PE=1 SV=2
Length = 194
Score = 169 bits (429), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 108/158 (68%)
Query: 10 QVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQ 69
++K+ LLGD G GK+S+V RFV+ F TIGA+F T+ + KF IWDTAGQ
Sbjct: 5 ELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQ 64
Query: 70 ERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEE 129
ER+HSLAPMYYRG+AAAV+VYDIT DSF KKWV+EL+ G N++M + NK DL +
Sbjct: 65 ERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSD 124
Query: 130 KRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEI 167
R+V ++ + YA+ G +ETSAK+A N+ ELF I
Sbjct: 125 IREVPLKDAKEYAESIGALVVETSAKNAINIEELFQGI 162
>sp|Q13636|RAB31_HUMAN Ras-related protein Rab-31 OS=Homo sapiens GN=RAB31 PE=1 SV=1
Length = 194
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 108/158 (68%)
Query: 10 QVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQ 69
++K+ LLGD G GK+S+V RFV+ F TIGA+F T+ + KF IWDTAGQ
Sbjct: 5 ELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQ 64
Query: 70 ERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEE 129
ER+HSLAPMYYRG+AAAV+VYDIT DSF KKWV+EL+ G N++M + NK DL +
Sbjct: 65 ERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSD 124
Query: 130 KRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEI 167
R+V ++ + YA+ G +ETSAK+A N+ ELF I
Sbjct: 125 IREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGI 162
>sp|Q9UL26|RB22A_HUMAN Ras-related protein Rab-22A OS=Homo sapiens GN=RAB22A PE=1 SV=2
Length = 194
Score = 162 bits (410), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/158 (49%), Positives = 108/158 (68%)
Query: 10 QVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQ 69
++K+ LLGD G GK+S+V RFV+ F TIGA+F T+ + KF IWDTAGQ
Sbjct: 5 ELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQ 64
Query: 70 ERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEE 129
ER+ +LAPMYYRG+AAA++VYDIT ++F K WV+EL++ G PN+++ + NK DL +
Sbjct: 65 ERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLID 124
Query: 130 KRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEI 167
R+V + + YA F+ETSAK+A N+NELF EI
Sbjct: 125 VREVMERDAKDYADSIHAIFVETSAKNAININELFIEI 162
>sp|P35285|RB22A_MOUSE Ras-related protein Rab-22A OS=Mus musculus GN=Rab22a PE=1 SV=2
Length = 194
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 108/158 (68%)
Query: 10 QVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQ 69
++K+ LLGD G GK+S+V RFV+ F TIGA+F T+ + KF IWDTAGQ
Sbjct: 5 ELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQ 64
Query: 70 ERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEE 129
ER+ +LAPMYYRG+AAA++VYDIT ++F K WV+EL++ G P++++ + NK DL +
Sbjct: 65 ERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTD 124
Query: 130 KRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEI 167
R+V + + YA F+ETSAK+A N+NELF EI
Sbjct: 125 VREVMERDAKDYADSIHAIFVETSAKNAININELFIEI 162
>sp|P51154|RB22A_CANFA Ras-related protein Rab-22A OS=Canis familiaris GN=RAB22A PE=1 SV=1
Length = 194
Score = 159 bits (402), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 107/158 (67%)
Query: 10 QVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQ 69
++K+ LLGD G GK+S+V RFV+ F TIGA+F T+ + KF IWDTAGQ
Sbjct: 5 ELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQ 64
Query: 70 ERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEE 129
E + +LAPMYYRG+AAA++VYDIT ++F K WV+EL++ G PN+++ + NK DL +
Sbjct: 65 EAFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLID 124
Query: 130 KRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEI 167
R+V + + YA F+ETSAK+A N+NELF EI
Sbjct: 125 VREVMERDAKDYADSIHAIFVETSAKNAININELFIEI 162
>sp|Q5R6B6|RAB2A_PONAB Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1
Length = 212
Score = 155 bits (393), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 105/153 (68%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELF 164
+VK EEGE +A+E+GL F+ETSAK+A NV E F
Sbjct: 128 EVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>sp|Q4R4X6|RAB2A_MACFA Ras-related protein Rab-2A OS=Macaca fascicularis GN=RAB2A PE=2
SV=1
Length = 212
Score = 155 bits (393), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 105/153 (68%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELF 164
+VK EEGE +A+E+GL F+ETSAK+A NV E F
Sbjct: 128 EVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>sp|P61019|RAB2A_HUMAN Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2A PE=1 SV=1
Length = 212
Score = 155 bits (393), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 105/153 (68%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELF 164
+VK EEGE +A+E+GL F+ETSAK+A NV E F
Sbjct: 128 EVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>sp|P61105|RAB2A_CANFA Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1
Length = 212
Score = 155 bits (393), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 105/153 (68%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELF 164
+VK EEGE +A+E+GL F+ETSAK+A NV E F
Sbjct: 128 EVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>sp|P53994|RAB2A_MOUSE Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1
Length = 212
Score = 155 bits (393), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 105/153 (68%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELF 164
+VK EEGE +A+E+GL F+ETSAK+A NV E F
Sbjct: 128 EVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>sp|Q01971|RAB2A_RABIT Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2
SV=1
Length = 212
Score = 155 bits (393), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 105/153 (68%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELF 164
+VK EEGE +A+E+GL F+ETSAK+A NV E F
Sbjct: 128 EVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>sp|Q90965|RAB2A_CHICK Ras-related protein Rab-2A OS=Gallus gallus GN=RAB2A PE=2 SV=1
Length = 212
Score = 155 bits (393), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 105/153 (68%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELF 164
+VK EEGE +A+E+GL F+ETSAK+A NV E F
Sbjct: 128 EVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>sp|Q39570|YPTC4_CHLRE GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4
PE=3 SV=1
Length = 213
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 103/153 (67%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT ++F W+++ ++ NPN+ + L+ NK DL +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELF 164
V EEGE +A+E+GL FLETSA++AHNV E F
Sbjct: 128 AVTTEEGEQFAKEHGLIFLETSARTAHNVEEAF 160
>sp|P36863|YPTV4_VOLCA GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1
Length = 213
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 103/153 (67%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT ++F W+++ ++ NPN+ + L+ NK DL +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELF 164
V EEGE +A+E+GL FLETSA++AHNV E F
Sbjct: 128 AVTTEEGEQFAKEHGLIFLETSARTAHNVEEAF 160
>sp|Q05975|RAB2_LYMST Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1
Length = 212
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 105/153 (68%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLEARR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELF 164
+VK EEGE +A+E+GL F+ETSAK+A NV E F
Sbjct: 128 EVKKEEGEAFAREHGLIFMETSAKTAANVEEAF 160
>sp|P17610|YPT3_SCHPO GTP-binding protein ypt3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt3 PE=1 SV=1
Length = 214
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 105/165 (63%), Gaps = 2/165 (1%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K VL+GD G GK++L++RF + +F +STIG F T+ + L+ IK IWDTAGQER
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
Y ++ YYRGA A++VYDIT SF+ +W++EL+ + N+++ LV NK DL R
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLR 131
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIGDCTECFSL 176
V EE + +A EN LSF+ETSA A NV E F + TE F +
Sbjct: 132 AVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTV--LTEIFRI 174
>sp|Q1KME6|RAB6A_CHICK Ras-related protein Rab-6A OS=Gallus gallus GN=RAB6A PE=2 SV=3
Length = 208
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 109/157 (69%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
KLV LG+ GKTSL+ RF+ F + ++TIG F ++ + L + TI+ +WDTAGQER
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ SL P Y R +AAAVVVYDIT+++SF++ KW+ +++ + ++I+ LV NK DL +KR
Sbjct: 75 FRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKR 134
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
+V EEGE A+E + F+ETSAK+ +NV +LF +
Sbjct: 135 QVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 171
>sp|P05712|RAB2A_RAT Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=1 SV=1
Length = 212
Score = 154 bits (389), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 105/153 (68%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + T+G F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELF 164
+VK EEGE +A+E+GL F+ETSAK+A NV E F
Sbjct: 128 EVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>sp|P35292|RAB17_MOUSE Ras-related protein Rab-17 OS=Mus musculus GN=Rab17 PE=1 SV=1
Length = 214
Score = 154 bits (388), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 111/154 (72%), Gaps = 2/154 (1%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
KLVLLG GKTSL LR++K F + T+G AFFT+VL L ++K +IWDTAGQE+
Sbjct: 21 KLVLLGSSSVGKTSLALRYMKQDFSNVL-PTVGCAFFTKVLDLGSSSLKLEIWDTAGQEK 79
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPN-LIMFLVANKVDLEEK 130
Y S+ +Y+RGA AA++VYDIT DSF +A++W+++L+++ P +++ LV NK DL E+
Sbjct: 80 YQSVCHLYFRGANAALLVYDITRKDSFHKAQQWLEDLEKEFQPGEVVVMLVGNKTDLGEE 139
Query: 131 RKVKNEEGELYAQENGLSFLETSAKSAHNVNELF 164
R+V +EG+ +A+ L F+ETSAK + V+E+F
Sbjct: 140 REVTFQEGKEFAESKSLLFMETSAKLNYQVSEIF 173
>sp|Q9H0T7|RAB17_HUMAN Ras-related protein Rab-17 OS=Homo sapiens GN=RAB17 PE=1 SV=2
Length = 212
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 111/158 (70%), Gaps = 2/158 (1%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
KLVLLG GK+SL LR+VK F T+G AFFT+V+ + ++K +IWDTAGQE+
Sbjct: 21 KLVLLGSGSVGKSSLALRYVKNDFKSIL-PTVGCAFFTKVVDVGATSLKLEIWDTAGQEK 79
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPN-LIMFLVANKVDLEEK 130
YHS+ +Y+RGA AA++VYDIT DSF +A++W+++L+ + +P +++ LV NK DL ++
Sbjct: 80 YHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLSQE 139
Query: 131 RKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
R+V +EG+ +A L F+ETSAK H V+E+F +
Sbjct: 140 REVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVA 177
>sp|Q8MYF2|RABJ_DICDI Ras-related protein RabJ OS=Dictyostelium discoideum GN=rabJ PE=3
SV=1
Length = 256
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 106/160 (66%)
Query: 9 IQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAG 68
++ K+VLLG GKT+L LR+V G F STIGA+F T+ +++ IK+ IWD+AG
Sbjct: 8 MESKVVLLGSSDVGKTALSLRYVDGIFPKRLTSTIGASFLTRTINIEGNKIKYLIWDSAG 67
Query: 69 QERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLE 128
Q+R+ SLA +YYRGA A++V+DIT +F+ K WV+EL+ +IM L NK+DLE
Sbjct: 68 QDRFRSLATLYYRGACVAILVFDITQQKTFDIVKGWVEELKANIQEEIIMVLCGNKIDLE 127
Query: 129 EKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
+ R+VK+E +LYA E ++ETSAK V +F EIG
Sbjct: 128 QNRQVKSETAKLYADEINAMYVETSAKENEGVEGMFLEIG 167
>sp|Q5RAV6|RAB6A_PONAB Ras-related protein Rab-6A OS=Pongo abelii GN=RAB6A PE=2 SV=3
Length = 208
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 107/157 (68%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
KLV LG+ GKTSL+ RF+ F + ++TIG F ++ + L + T++ +WDTAGQER
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ SL P Y R + AVVVYDIT+++SF++ KW+ +++ + ++I+ LV NK DL +KR
Sbjct: 75 FRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKR 134
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
+V EEGE A+E + F+ETSAK+ +NV +LF +
Sbjct: 135 QVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 171
>sp|P20340|RAB6A_HUMAN Ras-related protein Rab-6A OS=Homo sapiens GN=RAB6A PE=1 SV=3
Length = 208
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 107/157 (68%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
KLV LG+ GKTSL+ RF+ F + ++TIG F ++ + L + T++ +WDTAGQER
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ SL P Y R + AVVVYDIT+++SF++ KW+ +++ + ++I+ LV NK DL +KR
Sbjct: 75 FRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKR 134
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIG 168
+V EEGE A+E + F+ETSAK+ +NV +LF +
Sbjct: 135 QVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 171
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,370,375
Number of Sequences: 539616
Number of extensions: 2300248
Number of successful extensions: 11537
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 238
Number of HSP's that attempted gapping in prelim test: 9603
Number of HSP's gapped (non-prelim): 1203
length of query: 178
length of database: 191,569,459
effective HSP length: 110
effective length of query: 68
effective length of database: 132,211,699
effective search space: 8990395532
effective search space used: 8990395532
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)