BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030369
(178 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IFQ|A Chain A, Interction Of Plakoglobin And Beta-Catenin With Desmosomal
Cadherins
pdb|3IFQ|B Chain B, Interction Of Plakoglobin And Beta-Catenin With Desmosomal
Cadherins
Length = 553
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 4/105 (3%)
Query: 31 QNSTDEERKEKIV----ANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGG 86
Q TD R E+IV L A DP N + +LN + LF+ + E + G
Sbjct: 425 QPYTDGVRMEEIVEGCTGALHILARDPMNRMEIFRLNTIPLFVQLLYSSVENIQRVAAGV 484
Query: 87 ICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYL 131
+C + D A I G ++E L S T +A L+ +
Sbjct: 485 LCELAQDKEAADAIDAEGASAPLMELLHSRNEGTATYAAAVLFRI 529
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYL 131
I KSGGIP ++ LSSPV + + +A+ L+ L
Sbjct: 99 IFKSGGIPALVRMLSSPVESVLFYAITTLHNL 130
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 91 SVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSMSTKEEILKPEVVDVIR 150
SV P+N I ++GG+ + + L+S V + L L L ++TK+E L+ V+ ++
Sbjct: 216 SVCPSNKPAIVEAGGMQALGKHLTSNSPRLVQNCLWTLRNLSDVATKQEGLE-SVLKILV 274
Query: 151 RYAAAESVNV 160
+ + VNV
Sbjct: 275 NQLSVDDVNV 284
>pdb|3L6X|A Chain A, Crystal Structure Of P120 Catenin In Complex With
E-Cadherin
pdb|3L6Y|A Chain A, Crystal Structure Of P120 Catenin In Complex With
E-cadherin
pdb|3L6Y|C Chain C, Crystal Structure Of P120 Catenin In Complex With
E-cadherin
pdb|3L6Y|E Chain E, Crystal Structure Of P120 Catenin In Complex With
E-cadherin
Length = 584
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 49 FAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPL 108
+ Y Y + LRQ L D +T +E++V+ G + N +VD N +I K IP
Sbjct: 341 WTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKH-AIPN 399
Query: 109 IIECLSSPVRNT 120
+++ L +N+
Sbjct: 400 LVKNLPGGQQNS 411
>pdb|2Z6G|A Chain A, Crystal Structure Of A Full-Length Zebrafish Beta-Catenin
Length = 780
Score = 32.7 bits (73), Expect = 0.11, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYL 131
I KSGGIP ++ L SPV + + HA+ L+ L
Sbjct: 230 IFKSGGIPALVNMLGSPVDSVLFHAITTLHNL 261
Score = 31.6 bits (70), Expect = 0.28, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 48/127 (37%), Gaps = 8/127 (6%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 543 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEACTGALHILARDIHNRIVIRGLNT 594
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHA 124
+ LF+ + P E + G +C + D A I G + E L S +A
Sbjct: 595 IPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYA 654
Query: 125 LGALYYL 131
L+ +
Sbjct: 655 AAVLFRM 661
Score = 26.9 bits (58), Expect = 5.8, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 505 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 546
>pdb|3BCT|A Chain A, The Armadillo Repeat Region From Murine Beta-Catenin
Length = 470
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 10/90 (11%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQF-QNSTDEERKEKIVANLANFAYDPYNYTFLRQLN 63
+Q + RT GT + QF + EE E L A D +N +R LN
Sbjct: 352 HQDTQRRTSMGGTQQ---------QFVEGVRXEEIVEGCTGALHILARDVHNRIVIRGLN 402
Query: 64 VLELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 403 TIPLFVQLLYSPIENIQRVAAGVLCELAQD 432
Score = 30.0 bits (66), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYL 131
I KSGGIP +++ L SPV + + +A+ L+ L
Sbjct: 39 IFKSGGIPALVKXLGSPVDSVLFYAITTLHNL 70
Score = 26.6 bits (57), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGAL 128
E++VE G + + D N +I IPL ++ L SP+ N A G L
Sbjct: 375 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVL 426
Score = 26.2 bits (56), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 314 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 355
>pdb|1G3J|A Chain A, Crystal Structure Of The Xtcf3-CbdBETA-Catenin Armadillo
Repeat Complex
pdb|1G3J|C Chain C, Crystal Structure Of The Xtcf3-CbdBETA-Catenin Armadillo
Repeat Complex
pdb|1TH1|A Chain A, Beta-Catenin In Complex With A Phosphorylated Apc 20aa
Repeat Fragment
pdb|1TH1|B Chain B, Beta-Catenin In Complex With A Phosphorylated Apc 20aa
Repeat Fragment
Length = 532
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 412 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 463
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 464 IPLFVQLLYSPIENIQRVAAGVLCELAQD 492
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYL 131
I KSGGIP +++ L SPV + + +A+ L+ L
Sbjct: 99 IFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 130
Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGAL 128
E++VE G + + D N +I IPL ++ L SP+ N A G L
Sbjct: 435 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVL 486
Score = 26.9 bits (58), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 374 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 415
>pdb|4DJS|A Chain A, Structure Of Beta-Catenin In Complex With A Stapled
Peptide Inhibitor
Length = 518
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 397 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 448
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 449 IPLFVQLLYSPIENIQRVAAGVLCELAQD 477
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYL 131
I KSGGIP +++ L SPV + + +A+ L+ L
Sbjct: 84 IFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 115
Score = 26.9 bits (58), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGAL 128
E++VE G + + D N +I IPL ++ L SP+ N A G L
Sbjct: 420 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVL 471
Score = 26.6 bits (57), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 359 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 400
>pdb|1LUJ|A Chain A, Crystal Structure Of The Beta-CateninICAT COMPLEX
Length = 514
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 395 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 446
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 447 IPLFVQLLYSPIENIQRVAAGVLCELAQD 475
Score = 30.4 bits (67), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYL 131
I KSGGIP +++ L SPV + + +A+ L+ L
Sbjct: 82 IFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 113
Score = 26.9 bits (58), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGAL 128
E++VE G + + D N +I IPL ++ L SP+ N A G L
Sbjct: 418 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVL 469
Score = 26.6 bits (57), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 357 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 398
>pdb|1T08|A Chain A, Crystal Structure Of Beta-CateninICAT HELICAL
DomainUNPHOSPHORYLATED APC R3
Length = 519
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 399 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 450
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 451 IPLFVQLLYSPIENIQRVAAGVLCELAQD 479
Score = 30.4 bits (67), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYL 131
I KSGGIP +++ L SPV + + +A+ L+ L
Sbjct: 86 IFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 117
Score = 26.9 bits (58), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGAL 128
E++VE G + + D N +I IPL ++ L SP+ N A G L
Sbjct: 422 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVL 473
Score = 26.6 bits (57), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 361 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 402
>pdb|3TX7|A Chain A, Crystal Structure Of Lrh-1BETA-Catenin Complex
Length = 527
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 408 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 459
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 460 IPLFVQLLYSPIENIQRVAAGVLCELAQD 488
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYL 131
I KSGGIP +++ L SPV + + +A+ L+ L
Sbjct: 95 IFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 126
Score = 27.3 bits (59), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGAL 128
E++VE G + + D N +I IPL ++ L SP+ N A G L
Sbjct: 431 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVL 482
Score = 26.9 bits (58), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 370 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 411
>pdb|1JPW|A Chain A, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
pdb|1JPW|B Chain B, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
pdb|1JPW|C Chain C, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
Length = 540
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 414 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 465
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 466 IPLFVQLLYSPIENIQRVAAGVLCELAQD 494
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYL 131
I KSGGIP +++ L SPV + + +A+ L+ L
Sbjct: 101 IFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 132
Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGAL 128
E++VE G + + D N +I IPL ++ L SP+ N A G L
Sbjct: 437 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVL 488
Score = 26.9 bits (58), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 376 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 417
>pdb|1I7X|A Chain A, Beta-CateninE-Cadherin Complex
pdb|1I7X|C Chain C, Beta-CateninE-Cadherin Complex
pdb|1I7W|A Chain A, Beta-CateninPHOSPHORYLATED E-Cadherin Complex
pdb|1I7W|C Chain C, Beta-CateninPHOSPHORYLATED E-Cadherin Complex
pdb|1JPP|A Chain A, The Structure Of A Beta-Catenin Binding Repeat From
Adenomatous Polyposis Coli (Apc) In Complex With
Beta-Catenin
pdb|1JPP|B Chain B, The Structure Of A Beta-Catenin Binding Repeat From
Adenomatous Polyposis Coli (Apc) In Complex With
Beta-Catenin
pdb|1M1E|A Chain A, Beta-Catenin Armadillo Repeat Domain Bound To Icat
pdb|1V18|A Chain A, The Crystal Structure Of Beta-Catenin Armadillo Repeat
Complexed With A Phosphorylated Apc 20mer Repeat
Length = 538
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 411 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 462
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 463 IPLFVQLLYSPIENIQRVAAGVLCELAQD 491
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYL 131
I KSGGIP +++ L SPV + + +A+ L+ L
Sbjct: 98 IFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 129
Score = 27.3 bits (59), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGAL 128
E++VE G + + D N +I IPL ++ L SP+ N A G L
Sbjct: 434 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVL 485
Score = 26.9 bits (58), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 373 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 414
>pdb|1QZ7|A Chain A, Beta-Catenin Binding Domain Of Axin In Complex With Beta-
Catenin
Length = 533
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 412 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 463
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 464 IPLFVQLLYSPIENIQRVAAGVLCELAQD 492
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYL 131
I KSGGIP +++ L SPV + + +A+ L+ L
Sbjct: 99 IFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 130
Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGAL 128
E++VE G + + D N +I IPL ++ L SP+ N A G L
Sbjct: 435 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVL 486
Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 374 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 415
>pdb|2BCT|A Chain A, The Armadillo Repeat Region From Murine Beta-Catenin
Length = 516
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 395 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 446
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 447 IPLFVQLLYSPIENIQRVAAGVLCELAQD 475
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYL 131
I KSGGIP +++ L SPV + + +A+ L+ L
Sbjct: 82 IFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 113
Score = 26.9 bits (58), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGAL 128
E++VE G + + D N +I IPL ++ L SP+ N A G L
Sbjct: 418 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVL 469
Score = 26.6 bits (57), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 357 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 398
>pdb|1JDH|A Chain A, Crystal Structure Of Beta-Catenin And Htcf-4
Length = 529
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 410 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 461
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 462 IPLFVQLLYSPIENIQRVAAGVLCELAQD 490
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYL 131
I KSGGIP +++ L SPV + + +A+ L+ L
Sbjct: 97 IFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 128
Score = 27.3 bits (59), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGAL 128
E++VE G + + D N +I IPL ++ L SP+ N A G L
Sbjct: 433 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVL 484
Score = 26.9 bits (58), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 372 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 413
>pdb|3OUW|A Chain A, Structure Of Beta-Catenin With Lef-1
pdb|3OUX|A Chain A, Structure Of Beta-Catenin With Phosphorylated Lef-1
Length = 540
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 413 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 464
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 465 IPLFVQLLYSPIENIQRVAAGVLCELAQD 493
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYL 131
I KSGGIP +++ L SPV + + +A+ L+ L
Sbjct: 100 IFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 131
Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGAL 128
E++VE G + + D N +I IPL ++ L SP+ N A G L
Sbjct: 436 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVL 487
Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 375 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 416
>pdb|2GL7|A Chain A, Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX
pdb|2GL7|D Chain D, Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX
Length = 550
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 408 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 459
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 460 IPLFVQLLYSPIENIQRVAAGVLCELAQD 488
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYL 131
I KSGGIP +++ L SPV + + +A+ L+ L
Sbjct: 95 IFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 126
Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYL 131
E++VE G + + D N +I IPL ++ L SP+ N A G L L
Sbjct: 431 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCEL 485
Score = 26.9 bits (58), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 370 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 411
>pdb|2Z6H|A Chain A, Crystal Structure Of Beta-Catenin Armadillo Repeat Region
And Its C-Terminal Domain
Length = 644
Score = 31.2 bits (69), Expect = 0.30, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 48/127 (37%), Gaps = 8/127 (6%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 407 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 458
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHA 124
+ LF+ + P E + G +C + D A I G + E L S +A
Sbjct: 459 IPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYA 518
Query: 125 LGALYYL 131
L+ +
Sbjct: 519 AAVLFRM 525
Score = 30.8 bits (68), Expect = 0.40, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYL 131
I KSGGIP +++ L SPV + + +A+ L+ L
Sbjct: 94 IFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 125
Score = 26.9 bits (58), Expect = 5.6, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 369 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 410
>pdb|3SLA|A Chain A, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
pdb|3SLA|B Chain B, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
pdb|3SLA|C Chain C, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
pdb|3SLA|D Chain D, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
pdb|3SLA|E Chain E, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
Length = 168
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYL 131
I KSGGIP +++ L SPV + + +A+ L+ L
Sbjct: 93 IFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 124
>pdb|3SL9|A Chain A, X-Ray Structure Of Beta Catenin In Complex With Bcl9
pdb|3SL9|B Chain B, X-Ray Structure Of Beta Catenin In Complex With Bcl9
pdb|3SL9|E Chain E, X-Ray Structure Of Beta Catenin In Complex With Bcl9
pdb|3SL9|G Chain G, X-Ray Structure Of Beta Catenin In Complex With Bcl9
Length = 167
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYL 131
I KSGGIP +++ L SPV + + +A+ L+ L
Sbjct: 93 IFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 124
>pdb|3H4P|A Chain A, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|B Chain B, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|C Chain C, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|D Chain D, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|E Chain E, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|F Chain F, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|G Chain G, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|H Chain H, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|I Chain I, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|J Chain J, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|K Chain K, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|L Chain L, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|M Chain M, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|N Chain N, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
Length = 264
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 93 DPANAAIITKSGGI----PLIIECLSSPVRNTVNHALGALYYLCSMSTKEEILKPEVVDV 148
DP+ A I K+ I P+++E L R+ + G + +++ E +KPE VDV
Sbjct: 156 DPSGALIEYKATAIGSGRPVVMELLEKEYRDDITLDEGLELAITALTKANEDIKPENVDV 215
>pdb|4HXT|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or329
Length = 252
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Query: 25 ELVSQFQNSTDEERKEKIVANLANFAYDPYN-YTFLRQLNVLELFLDCITEPNEKLVEFG 83
E++ + STD E +++ LAN A P + +E+ + +T + ++ +
Sbjct: 47 EVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEA 106
Query: 84 VGGICNASVDPANA-AIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCS 133
+ N + P A I +GG+ ++++ L+S A AL + S
Sbjct: 107 ARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIAS 157
>pdb|3GFF|A Chain A, Crystal Structure Of Iroe-Like Serine Hydrolase
(Np_718593.1) From Shewanella Oneidensis At 2.12 A
Resolution
pdb|3GFF|B Chain B, Crystal Structure Of Iroe-Like Serine Hydrolase
(Np_718593.1) From Shewanella Oneidensis At 2.12 A
Resolution
Length = 331
Score = 27.7 bits (60), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 10 ERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYD 52
ER G TP QYL++L+ ERK+ + +FA D
Sbjct: 289 ERFGHKVTPSQQYLEQLIQYSDRQQLTERKQXLEGLRQHFAKD 331
>pdb|1XM9|A Chain A, Structure Of The Armadillo Repeat Domain Of Plakophilin 1
Length = 457
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Query: 104 GGIPLIIECLSSPVRNTVNHALGALYYLCSMSTKEEILK------PEVVDVIRRYAAAE 156
GGI +++ L SP +N A GAL L ST ++ E V ++RR AE
Sbjct: 44 GGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAE 102
>pdb|2JDQ|A Chain A, C-Terminal Domain Of Influenza A Virus Polymerase Pb2
Subunit In Complex With Human Importin Alpha5
pdb|2JDQ|B Chain B, C-Terminal Domain Of Influenza A Virus Polymerase Pb2
Subunit In Complex With Human Importin Alpha5
Length = 450
Score = 27.3 bits (59), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 90 ASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSMST 136
AS + I+ ++G +P+ IE LSS + A+ AL + ST
Sbjct: 93 ASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDST 139
>pdb|3TJ3|A Chain A, Structure Of Importin A5 Bound To The N-Terminus Of Nup50
pdb|3TJ3|B Chain B, Structure Of Importin A5 Bound To The N-Terminus Of Nup50
Length = 447
Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 90 ASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSMST 136
AS + I+ ++G +P+ IE LSS + A+ AL + ST
Sbjct: 90 ASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDST 136
>pdb|2XZM|4 Chain 4, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 1
pdb|2XZN|4 Chain 4, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 2
Length = 265
Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 1 MFTNNQRQEERTGRSGTPRLQYLQELVSQ 29
++++ ++ E+ TGR G P Q Q L++Q
Sbjct: 237 LYSHEKKGEKATGRDGAPEEQAAQNLLAQ 265
>pdb|3MQ1|A Chain A, Crystal Structure Of Dust Mite Allergen Der P 5
pdb|3MQ1|B Chain B, Crystal Structure Of Dust Mite Allergen Der P 5
pdb|3MQ1|C Chain C, Crystal Structure Of Dust Mite Allergen Der P 5
pdb|3MQ1|D Chain D, Crystal Structure Of Dust Mite Allergen Der P 5
pdb|3MQ1|E Chain E, Crystal Structure Of Dust Mite Allergen Der P 5
pdb|3MQ1|F Chain F, Crystal Structure Of Dust Mite Allergen Der P 5
Length = 103
Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 14 RSGTPRLQYLQELVSQFQNSTDEERKEKIVANL 46
+ G L YLQE ++ F+ +E K+KIVA +
Sbjct: 14 KKGELALFYLQEQINHFEEKPTKEMKDKIVAEM 46
>pdb|3O4Z|A Chain A, Tel2 Structure And Function In The Hsp90-Dependent
Maturation Of Mtor And Atr Complexes
pdb|3O4Z|B Chain B, Tel2 Structure And Function In The Hsp90-Dependent
Maturation Of Mtor And Atr Complexes
pdb|3O4Z|C Chain C, Tel2 Structure And Function In The Hsp90-Dependent
Maturation Of Mtor And Atr Complexes
pdb|3O4Z|D Chain D, Tel2 Structure And Function In The Hsp90-Dependent
Maturation Of Mtor And Atr Complexes
Length = 647
Score = 26.2 bits (56), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 21 QYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITE 74
+++ LVS+F + TDEE K L FA N++ ++ E FL+ +T+
Sbjct: 278 KFVSALVSKFADFTDEEVDTKTCELLVLFAVHNLNHSQREEIAHDERFLNGVTK 331
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,996,332
Number of Sequences: 62578
Number of extensions: 187530
Number of successful extensions: 588
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 496
Number of HSP's gapped (non-prelim): 92
length of query: 178
length of database: 14,973,337
effective HSP length: 92
effective length of query: 86
effective length of database: 9,216,161
effective search space: 792589846
effective search space used: 792589846
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 48 (23.1 bits)