Query 030369
Match_columns 178
No_of_seqs 97 out of 111
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 20:37:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030369.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030369hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4db6_A Armadillo repeat protei 99.6 1.3E-14 4.5E-19 112.6 14.2 151 22-175 55-209 (210)
2 4db6_A Armadillo repeat protei 99.6 1.2E-14 3.9E-19 112.9 13.8 144 26-175 16-167 (210)
3 3tt9_A Plakophilin-2; cell adh 99.6 1.6E-15 5.3E-20 127.0 7.0 127 23-149 10-144 (233)
4 3l6x_A Catenin delta-1; cateni 99.6 7.4E-15 2.5E-19 137.1 10.1 144 5-149 32-183 (584)
5 4db8_A Armadillo-repeat protei 99.5 1.2E-13 4E-18 109.8 14.1 146 22-174 55-208 (252)
6 1xm9_A Plakophilin 1; armadill 99.5 4E-14 1.4E-18 125.5 11.6 127 23-150 4-137 (457)
7 4hxt_A De novo protein OR329; 99.5 2E-13 6.8E-18 107.0 14.0 146 22-174 45-198 (252)
8 4hxt_A De novo protein OR329; 99.5 3.5E-13 1.2E-17 105.6 14.1 145 23-174 4-156 (252)
9 4db8_A Armadillo-repeat protei 99.5 4.6E-13 1.6E-17 106.3 13.9 150 22-174 97-250 (252)
10 1xm9_A Plakophilin 1; armadill 99.5 2.2E-13 7.6E-18 120.7 13.0 129 22-152 45-197 (457)
11 3tt9_A Plakophilin-2; cell adh 99.5 1.5E-13 5.1E-18 114.9 11.2 130 23-154 54-208 (233)
12 3nmw_A APC variant protein; AR 99.4 3.5E-13 1.2E-17 117.8 11.0 146 23-174 172-333 (354)
13 3l6x_A Catenin delta-1; cateni 99.4 1.5E-12 5E-17 121.6 12.9 128 23-152 92-247 (584)
14 3nmw_A APC variant protein; AR 99.4 4.3E-12 1.5E-16 110.9 12.4 127 23-150 129-273 (354)
15 3nmz_A APC variant protein; pr 99.4 2E-12 6.9E-17 117.1 10.4 147 23-175 288-450 (458)
16 1jdh_A Beta-catenin; beta-cate 99.3 1.2E-11 4.2E-16 107.2 11.1 148 23-172 357-527 (529)
17 3tpo_A Importin subunit alpha- 99.3 5.5E-12 1.9E-16 112.9 9.1 143 32-176 345-498 (529)
18 1xqr_A HSPBP1 protein; armadil 99.3 1.4E-11 4.7E-16 105.5 11.0 147 20-172 27-193 (296)
19 3ul1_B Importin subunit alpha- 99.3 1.2E-11 4.3E-16 110.5 10.8 143 32-176 326-479 (510)
20 3nmz_A APC variant protein; pr 99.3 1.7E-11 5.7E-16 111.1 11.6 128 22-150 244-389 (458)
21 1xqr_A HSPBP1 protein; armadil 99.3 1.3E-11 4.3E-16 105.7 10.0 127 24-150 84-219 (296)
22 4b8j_A Importin subunit alpha- 99.3 5.2E-11 1.8E-15 104.9 14.1 127 23-149 119-253 (528)
23 3ul1_B Importin subunit alpha- 99.3 1.2E-10 4E-15 104.2 15.4 127 23-149 102-241 (510)
24 1jdh_A Beta-catenin; beta-cate 99.3 1.8E-11 6.2E-16 106.1 9.7 132 21-152 59-197 (529)
25 2z6h_A Catenin beta-1, beta-ca 99.2 9E-11 3.1E-15 107.0 12.4 149 22-172 353-524 (644)
26 3tpo_A Importin subunit alpha- 99.2 2.9E-10 9.9E-15 101.7 14.9 127 23-149 121-260 (529)
27 4b8j_A Importin subunit alpha- 99.2 7.7E-11 2.6E-15 103.8 10.9 152 23-176 330-497 (528)
28 2z6g_A B-catenin; FULL-length, 99.2 6.8E-11 2.3E-15 111.6 11.2 149 23-173 490-661 (780)
29 1wa5_B Importin alpha subunit; 99.2 3.3E-10 1.1E-14 100.2 13.9 128 22-149 131-266 (530)
30 2z6h_A Catenin beta-1, beta-ca 99.1 2E-10 6.9E-15 104.7 11.5 122 34-156 428-549 (644)
31 2jdq_A Importin alpha-1 subuni 99.1 2.4E-09 8.1E-14 90.7 15.8 130 21-150 64-202 (450)
32 2z6g_A B-catenin; FULL-length, 99.1 4.6E-10 1.6E-14 105.9 11.3 101 35-135 565-665 (780)
33 1wa5_B Importin alpha subunit; 99.0 2.4E-09 8.2E-14 94.7 12.1 143 23-172 175-325 (530)
34 3now_A UNC-45 protein, SD10334 99.0 5.7E-10 1.9E-14 107.7 8.3 129 23-151 379-547 (810)
35 2jdq_A Importin alpha-1 subuni 99.0 1.3E-08 4.3E-13 86.2 14.5 148 23-173 151-303 (450)
36 3now_A UNC-45 protein, SD10334 98.9 4.3E-09 1.5E-13 101.6 9.7 138 31-171 632-778 (810)
37 3opb_A SWI5-dependent HO expre 98.6 8.8E-08 3E-12 92.3 9.4 96 55-150 449-555 (778)
38 3opb_A SWI5-dependent HO expre 98.5 4E-07 1.4E-11 87.8 11.3 144 23-169 459-629 (778)
39 4gmo_A Putative uncharacterize 98.5 3.4E-07 1.2E-11 85.4 8.8 154 19-176 32-215 (684)
40 4gmo_A Putative uncharacterize 97.7 3.5E-05 1.2E-09 71.9 6.0 95 59-154 31-133 (684)
41 3ltm_A Alpha-REP4; protein eng 97.7 0.0012 4E-08 50.9 13.4 131 22-175 51-203 (211)
42 3ltm_A Alpha-REP4; protein eng 97.5 0.0031 1.1E-07 48.5 13.1 97 17-134 15-111 (211)
43 3ltj_A Alpharep-4; protein eng 97.5 0.0041 1.4E-07 47.4 13.6 90 22-132 46-135 (201)
44 3ltj_A Alpharep-4; protein eng 97.4 0.0059 2E-07 46.5 13.5 80 34-133 26-105 (201)
45 3grl_A General vesicular trans 97.2 0.0025 8.6E-08 60.5 11.7 150 19-177 19-197 (651)
46 3grl_A General vesicular trans 97.2 0.0044 1.5E-07 58.9 13.0 132 23-154 213-374 (651)
47 1oyz_A Hypothetical protein YI 97.0 0.041 1.4E-06 43.9 15.7 86 32-132 101-187 (280)
48 1oyz_A Hypothetical protein YI 96.8 0.029 1E-06 44.8 12.6 59 24-93 26-84 (280)
49 2qk2_A LP04448P; mini spindles 96.7 0.067 2.3E-06 42.2 14.1 142 20-171 55-201 (242)
50 1te4_A Conserved protein MTH18 96.6 0.0071 2.4E-07 43.9 7.1 54 65-128 75-128 (131)
51 2vgl_B AP-2 complex subunit be 96.4 0.028 9.6E-07 50.9 11.3 92 34-134 98-190 (591)
52 2vgl_B AP-2 complex subunit be 96.3 0.051 1.8E-06 49.1 12.8 130 32-175 59-189 (591)
53 1ibr_B P95, importin beta-1 su 96.2 0.049 1.7E-06 45.5 11.1 151 20-174 127-287 (462)
54 3dad_A FH1/FH2 domain-containi 96.2 0.02 6.7E-07 50.6 8.9 106 68-175 123-231 (339)
55 4fdd_A Transportin-1; heat rep 96.2 0.033 1.1E-06 51.8 10.7 153 20-175 127-285 (852)
56 4fdd_A Transportin-1; heat rep 95.9 0.059 2E-06 50.1 11.0 141 21-168 89-237 (852)
57 1b3u_A Protein (protein phosph 95.7 0.18 6.1E-06 43.5 12.7 136 30-172 449-584 (588)
58 1te4_A Conserved protein MTH18 95.7 0.053 1.8E-06 39.2 8.0 117 21-170 12-128 (131)
59 1w63_A Adapter-related protein 95.3 0.27 9.4E-06 44.8 13.1 73 63-139 313-385 (618)
60 1b3u_A Protein (protein phosph 95.1 0.11 3.6E-06 44.9 9.2 69 63-133 164-232 (588)
61 2qk1_A Protein STU2; STU2P, XM 94.4 0.56 1.9E-05 38.1 11.5 142 20-172 59-217 (249)
62 2qk1_A Protein STU2; STU2P, XM 94.3 0.36 1.2E-05 39.3 10.2 133 33-174 27-174 (249)
63 2qk2_A LP04448P; mini spindles 94.0 0.72 2.5E-05 36.2 11.1 136 26-173 20-160 (242)
64 2vgl_A Adaptor protein complex 93.7 0.5 1.7E-05 43.5 11.0 108 15-133 51-177 (621)
65 1ibr_B P95, importin beta-1 su 93.6 0.26 8.9E-06 41.0 8.2 149 20-173 215-393 (462)
66 2bpt_A Importin beta-1 subunit 93.5 0.86 2.9E-05 41.3 11.9 137 25-171 99-249 (861)
67 1u6g_C TIP120 protein, CAND1; 93.4 0.33 1.1E-05 46.9 9.6 104 23-132 8-114 (1230)
68 2bpt_A Importin beta-1 subunit 93.3 1.2 4.2E-05 40.3 12.6 98 32-134 379-483 (861)
69 3dad_A FH1/FH2 domain-containi 92.6 0.8 2.7E-05 40.3 10.0 110 24-134 121-232 (339)
70 2vgl_A Adaptor protein complex 92.3 0.52 1.8E-05 43.4 8.8 110 33-152 122-236 (621)
71 1w63_A Adapter-related protein 91.5 0.76 2.6E-05 41.9 8.9 65 65-134 144-209 (618)
72 4ffb_C Protein STU2; tubulin f 91.4 1.5 5.1E-05 35.4 9.8 104 63-172 55-165 (278)
73 1u6g_C TIP120 protein, CAND1; 91.2 1.4 4.9E-05 42.5 11.0 137 21-167 48-196 (1230)
74 1qgr_A Protein (importin beta 91.1 1.1 3.9E-05 40.6 9.6 147 21-174 128-287 (876)
75 1qgr_A Protein (importin beta 89.0 2.1 7.3E-05 38.8 9.6 98 32-134 376-480 (876)
76 3u0r_A Apoptosis inhibitor 5; 89.0 0.84 2.9E-05 42.2 6.9 85 35-130 41-129 (507)
77 4ffb_C Protein STU2; tubulin f 84.7 1.9 6.6E-05 34.7 6.2 101 63-170 102-207 (278)
78 3b2a_A TON_1937, putative unch 83.4 8.5 0.00029 32.8 9.7 66 64-134 151-219 (265)
79 4ady_A RPN2, 26S proteasome re 81.2 23 0.0008 35.0 13.2 121 15-152 571-693 (963)
80 3tjz_B Coatomer subunit gamma; 80.4 4.7 0.00016 35.1 7.4 63 67-133 143-205 (355)
81 1wa5_C Importin alpha RE-expor 78.9 28 0.00095 32.9 12.6 127 21-152 454-606 (960)
82 3ebb_A Phospholipase A2-activa 76.9 33 0.0011 29.0 11.5 144 22-171 148-302 (304)
83 3b2a_A TON_1937, putative unch 75.3 13 0.00046 31.6 8.4 66 65-136 117-182 (265)
84 3eg5_B Protein diaphanous homo 75.2 31 0.0011 30.0 11.1 114 51-167 97-223 (383)
85 3tjz_B Coatomer subunit gamma; 73.9 44 0.0015 28.9 11.8 29 15-44 20-49 (355)
86 2f31_A Diaphanous protein homo 71.1 26 0.00089 28.0 9.0 111 53-166 33-156 (233)
87 1wa5_C Importin alpha RE-expor 70.5 57 0.002 30.8 12.4 110 21-133 402-525 (960)
88 2bnx_A Diaphanous protein homo 68.6 21 0.00073 31.0 8.5 114 52-167 36-161 (386)
89 3ibv_A Exportin-T; karyopherin 67.8 21 0.00073 34.6 9.0 147 20-174 191-360 (980)
90 1ho8_A Vacuolar ATP synthase s 63.3 5.5 0.00019 36.5 3.8 73 54-132 392-475 (480)
91 1x5b_A Signal transducing adap 63.0 9.6 0.00033 29.5 4.6 67 106-173 54-123 (163)
92 2iw3_A Elongation factor 3A; a 60.4 22 0.00075 35.2 7.6 121 23-150 16-143 (986)
93 2x19_B Importin-13; nuclear tr 57.0 95 0.0032 28.8 11.0 117 27-151 454-575 (963)
94 3ldz_A STAM-1, signal transduc 47.7 83 0.0028 23.3 7.7 65 106-172 44-111 (140)
95 3gs3_A Symplekin, LD45768P; he 46.1 1.2E+02 0.0043 24.9 9.2 62 65-130 55-116 (257)
96 2iw3_A Elongation factor 3A; a 44.3 77 0.0026 31.4 8.5 94 21-117 133-226 (986)
97 3m1i_C Exportin-1; heat repeat 42.6 1E+02 0.0034 29.5 8.9 90 53-150 133-241 (1049)
98 3l9t_A Putative uncharacterize 42.0 1.5E+02 0.0051 24.6 9.8 24 64-87 140-163 (240)
99 2x19_B Importin-13; nuclear tr 41.8 2.1E+02 0.0072 26.4 10.8 75 20-102 23-103 (963)
100 3zyq_A Hepatocyte growth facto 41.3 74 0.0025 25.5 6.8 65 106-171 47-114 (226)
101 3g2s_A C-terminal fragment of 40.2 1.2E+02 0.004 23.0 7.4 67 106-172 50-123 (149)
102 1ho8_A Vacuolar ATP synthase s 38.8 1.7E+02 0.0059 26.6 9.4 99 36-135 182-303 (480)
103 1juq_A ADP-ribosylation factor 38.6 59 0.002 25.1 5.6 68 106-173 52-126 (171)
104 3a6p_A Exportin-5; exportin-5, 38.3 89 0.003 30.9 8.0 132 35-173 220-378 (1204)
105 3ebb_A Phospholipase A2-activa 37.2 1.1E+02 0.0038 25.7 7.5 57 76-132 161-219 (304)
106 1upk_A MO25 protein; transfera 37.1 1E+02 0.0034 27.0 7.3 89 66-154 212-311 (341)
107 4ady_A RPN2, 26S proteasome re 36.4 3.3E+02 0.011 27.0 13.1 35 16-50 502-536 (963)
108 2of3_A ZYG-9; multifunctional 35.8 47 0.0016 27.7 4.9 46 104-149 204-257 (266)
109 2osa_A N-chimaerin; RHO-GAP, G 35.7 36 0.0012 26.4 3.9 14 62-75 83-96 (202)
110 3o2t_A Symplekin; heat repeat, 34.6 2.3E+02 0.0078 24.9 9.3 104 21-132 63-182 (386)
111 3byi_A RHO GTPase activating p 34.5 44 0.0015 26.1 4.3 14 62-75 93-106 (214)
112 2db0_A 253AA long hypothetical 34.0 96 0.0033 25.9 6.3 61 106-169 34-94 (253)
113 3mq1_A Mite allergen DER P 5; 33.1 37 0.0013 25.0 3.3 26 19-44 19-44 (103)
114 1mhq_A ADP-ribosylation factor 33.0 38 0.0013 25.6 3.6 68 105-172 39-113 (148)
115 3nfq_A Transcription factor IW 32.4 1.8E+02 0.006 22.9 7.5 145 10-176 1-152 (170)
116 2db0_A 253AA long hypothetical 32.1 41 0.0014 28.1 3.8 52 106-160 183-235 (253)
117 1f7c_A Rhogap protein; GTPase 31.7 59 0.002 25.8 4.7 13 63-75 99-111 (231)
118 2ee4_A RHO GTPase activating p 31.6 64 0.0022 25.1 4.8 13 63-75 85-97 (209)
119 3msx_B RHO GTPase-activating p 30.7 61 0.0021 24.9 4.5 13 63-75 82-94 (201)
120 2gom_A Fibrinogen-binding prot 30.2 35 0.0012 22.6 2.5 34 23-56 10-45 (61)
121 3iug_A RHO/CDC42/RAC GTPase-ac 29.6 62 0.0021 25.6 4.4 13 63-75 96-108 (229)
122 1dvp_A HRS, hepatocyte growth 29.6 86 0.0029 24.7 5.3 66 106-172 44-112 (220)
123 3gs3_A Symplekin, LD45768P; he 29.4 2.4E+02 0.0081 23.2 9.4 94 35-132 47-172 (257)
124 2xpp_A IWS1, ECU08_0440; trans 28.6 1.9E+02 0.0066 22.0 6.9 101 54-175 30-136 (145)
125 3cxl_A N-chimerin; SH2, RHO-GA 27.9 51 0.0017 29.0 4.0 13 63-75 345-357 (463)
126 1n4k_A Inositol 1,4,5-trisphos 26.6 1.8E+02 0.0061 25.2 7.2 39 37-75 248-303 (381)
127 3fk2_A Glucocorticoid receptor 26.4 66 0.0023 25.8 4.1 27 106-132 164-190 (246)
128 1lrv_A LRV, leucine-rich repea 26.4 1.2E+02 0.0043 24.4 5.8 22 106-127 196-217 (244)
129 2xpp_A IWS1, ECU08_0440; trans 25.4 1.5E+02 0.0052 22.6 5.8 54 7-63 25-105 (145)
130 2jmh_A BLO T 5, mite allergen 25.1 47 0.0016 25.0 2.7 26 19-44 34-59 (119)
131 1pbw_A Rhogap domain, phosphat 24.9 74 0.0025 24.9 4.1 13 63-75 81-93 (216)
132 2lm9_A BLO T 21 allergen; DUST 24.8 30 0.001 25.2 1.5 26 19-44 13-38 (96)
133 3oc3_A Helicase MOT1, MOT1; re 24.8 1.3E+02 0.0044 29.1 6.2 79 23-114 265-344 (800)
134 3kuq_A RHO GTPase-activating p 24.4 54 0.0019 26.0 3.2 25 145-169 149-174 (228)
135 3m1i_C Exportin-1; heat repeat 24.3 71 0.0024 30.5 4.5 37 55-93 534-570 (1049)
136 4e17_B Catenin alpha-1; four h 24.0 41 0.0014 20.8 1.8 14 20-33 25-38 (40)
137 2r17_C Vacuolar protein sortin 23.7 77 0.0026 27.1 4.2 51 100-150 3-55 (298)
138 1vdy_A Hypothetical protein (R 22.6 90 0.0031 23.7 4.0 66 106-171 51-126 (140)
139 2kua_A BCL-2-like protein 10; 21.9 2.4E+02 0.0083 21.7 6.5 112 6-118 23-168 (170)
140 2noj_B EFB homologous protein; 21.9 60 0.0021 22.4 2.5 34 23-56 29-64 (80)
141 2of3_A ZYG-9; multifunctional 21.0 1.8E+02 0.0062 24.1 5.9 55 107-167 170-228 (266)
142 2x1g_F Cadmus; transport prote 20.6 1.2E+02 0.004 28.4 5.1 128 22-154 502-642 (971)
No 1
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=99.61 E-value=1.3e-14 Score=112.58 Aligned_cols=151 Identities=19% Similarity=0.284 Sum_probs=126.9
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHhhhhc-cCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcC-CchhhHH
Q 030369 22 YLQELVSQFQNSTDEERKEKIVANLANFA-YDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV-DPANAAI 99 (178)
Q Consensus 22 ylq~LV~efq~t~~~e~keqvlanLaNfA-yDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~-D~~nk~~ 99 (178)
-+..||.-.+. ++.+.+++++..|+|++ .+|.+...+.+.|+++.++..|..+++.+++.|+++|+|+|. ++..+..
T Consensus 55 ~i~~L~~lL~~-~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 133 (210)
T 4db6_A 55 ALPALVQLLSS-PNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQA 133 (210)
T ss_dssp HHHHHHHHTTC-SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred CHHHHHHHHcC-CCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 35567766655 48899999999999999 589999999999999999999999999999999999999995 5777788
Q ss_pred hhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCC--cccccccchHHHHHHHHhhhhcccchhHHHhHHHHHHhhcc
Q 030369 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSM--STKEEILKPEVVDVIRRYAAAESVNVSFSNLAKAFLDKHVT 175 (178)
Q Consensus 100 I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~--~sr~~I~~p~ll~ll~~~~~~~~~~~~~~nla~~fL~~~~~ 175 (178)
+.+.|+++.|+++|++++++++.+|+.+|.+|+.. ..+..+.....++.|.+.-.++ +++++..|...|...++
T Consensus 134 ~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~--~~~v~~~a~~aL~~l~~ 209 (210)
T 4db6_A 134 VIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHE--NEKIQKEAQEALEKLQS 209 (210)
T ss_dssp HHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGGGCS--CHHHHHHHHHHHHHHCC
T ss_pred HHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHhCC--CHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999965 3455555444555555554544 57899999999987764
No 2
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=99.61 E-value=1.2e-14 Score=112.91 Aligned_cols=144 Identities=19% Similarity=0.260 Sum_probs=119.5
Q ss_pred HHHHhhcCChHHHHHHHHHHhhhhc-cCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhc-CCchhhHHhhhc
Q 030369 26 LVSQFQNSTDEERKEKIVANLANFA-YDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNAS-VDPANAAIITKS 103 (178)
Q Consensus 26 LV~efq~t~~~e~keqvlanLaNfA-yDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~-~D~~nk~~I~~~ 103 (178)
.+..+-.+++.+.++.++..|.|++ .+|.+...+.+.++++.++.+|..+++.+++.|+.+|+|++ -++.++..|.+.
T Consensus 16 ~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~ 95 (210)
T 4db6_A 16 QMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDA 95 (210)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHC
Confidence 3444445778999999999999999 78999999999999999999999999999999999999999 478999999999
Q ss_pred CChhHHHHhhcCCchhHHHHHHHHHHHhcCC--ccccccc----chHHHHHHHHhhhhcccchhHHHhHHHHHHhhcc
Q 030369 104 GGIPLIIECLSSPVRNTVNHALGALYYLCSM--STKEEIL----KPEVVDVIRRYAAAESVNVSFSNLAKAFLDKHVT 175 (178)
Q Consensus 104 gGi~~li~lLsS~~~evv~~AlttL~~L~~~--~sr~~I~----~p~ll~ll~~~~~~~~~~~~~~nla~~fL~~~~~ 175 (178)
||+|.++++|++++++++..|+.+|.+|+.. ..+..+. .|+++++|+. + ++.++.-|...|...+.
T Consensus 96 g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~----~--~~~v~~~a~~aL~~l~~ 167 (210)
T 4db6_A 96 GALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSS----P--NEQILQEALWALSNIAS 167 (210)
T ss_dssp TCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTC----S--CHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcC----C--CHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999954 2333444 3777777742 2 45666666666655443
No 3
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=99.59 E-value=1.6e-15 Score=127.01 Aligned_cols=127 Identities=18% Similarity=0.220 Sum_probs=109.6
Q ss_pred HHHHHHHhhcCCh-HHHHHHHHHHhhhhcc-CcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcC-CchhhHH
Q 030369 23 LQELVSQFQNSTD-EERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV-DPANAAI 99 (178)
Q Consensus 23 lq~LV~efq~t~~-~e~keqvlanLaNfAy-DP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~-D~~nk~~ 99 (178)
|..||.-.+..+. .+.|..+.+.|.|.++ ||.|+..+++.|+|+.|++.|.++++.+++.|+++|.|++. ++.||..
T Consensus 10 i~~lV~lL~s~~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk~~ 89 (233)
T 3tt9_A 10 LERAVSMLEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKLE 89 (233)
T ss_dssp HHHHHHTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHhCCCCchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 4567776655433 2778888899999995 89999999999999999999999999999999999999998 5999999
Q ss_pred hhhcCChhHHHHhhc-CCchhHHHHHHHHHHHhcCC-ccccccc---chHHHHHH
Q 030369 100 ITKSGGIPLIIECLS-SPVRNTVNHALGALYYLCSM-STKEEIL---KPEVVDVI 149 (178)
Q Consensus 100 I~~~gGi~~li~lLs-S~~~evv~~AlttL~~L~~~-~sr~~I~---~p~ll~ll 149 (178)
|.+.||||+|+++|+ ++++++..+|.++|++|... +.|..|. .|+|++++
T Consensus 90 I~~~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS~~~~~k~~i~~~~i~~Lv~ll 144 (233)
T 3tt9_A 90 VAELNGVPRLLQVLKQTRDLETKKQITGLLWNLSSNDKLKNLMITEALLTLTENI 144 (233)
T ss_dssp HHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSGGGHHHHHHHHHHHHCCCC
T ss_pred HHHcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcChhhHHHHHhccHHHHHHHH
Confidence 999999999999996 67899999999999999876 5677776 47777654
No 4
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=99.56 E-value=7.4e-15 Score=137.08 Aligned_cols=144 Identities=20% Similarity=0.247 Sum_probs=123.0
Q ss_pred HHHHHHhhCCCCCChHHHHHHHHHHhhcCChHHHHHHHHHHhhhhcc-CcccHHHhhhccChHHHHhhhcCCcHHHHHHH
Q 030369 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFG 83 (178)
Q Consensus 5 ~~~l~~rt~~~g~~R~~ylq~LV~efq~t~~~e~keqvlanLaNfAy-DP~N~~~LrqL~vidlfld~L~~~n~~l~EfA 83 (178)
=.++.|+.++.+.-|..=+..||.-.+ +++.+.|+++...|.|.++ ++.|+..+++.|+|+.|+++|.++++.+++.|
T Consensus 32 ~~~~~~~~~~~~~~~~~~i~~LV~~L~-s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~~~~vq~~A 110 (584)
T 3l6x_A 32 LDSLRKGGPPPPNWRQPELPEVIAMLG-FRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGA 110 (584)
T ss_dssp --------CCCCCCCCCCHHHHHHHTT-CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHH
T ss_pred HHHHHhcCCCCCCcccccHHHHHHHHC-CCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCCCHHHHHHH
Confidence 345667767777778888999998876 4578999999999999996 89999999999999999999999999999999
Q ss_pred HHHHHhhcC--CchhhHHhhhcCChhHHHHhhcC-CchhHHHHHHHHHHHhcCC-ccccccc---chHHHHHH
Q 030369 84 VGGICNASV--DPANAAIITKSGGIPLIIECLSS-PVRNTVNHALGALYYLCSM-STKEEIL---KPEVVDVI 149 (178)
Q Consensus 84 iggLcNL~~--D~~nk~~I~~~gGi~~li~lLsS-~~~evv~~AlttL~~L~~~-~sr~~I~---~p~ll~ll 149 (178)
+++|.||+. ++.||..|.+.||||+|+++|++ +++++..+|..+|++|... +.+..|. .|+|++++
T Consensus 111 a~AL~nLa~~~~~~nk~~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~~~~~k~~I~~~alp~Lv~LL 183 (584)
T 3l6x_A 111 CGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIKMEIVDHALHALTDEV 183 (584)
T ss_dssp HHHHHHHTSSSCHHHHHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTSGGGHHHHHHHTHHHHHHHT
T ss_pred HHHHHHHHccCCHHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhccHHHHHHHH
Confidence 999999998 49999999999999999999976 6789999999999999976 5677776 48898877
No 5
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=99.54 E-value=1.2e-13 Score=109.76 Aligned_cols=146 Identities=19% Similarity=0.275 Sum_probs=121.9
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHhhhhcc-CcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhh-HH
Q 030369 22 YLQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANA-AI 99 (178)
Q Consensus 22 ylq~LV~efq~t~~~e~keqvlanLaNfAy-DP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk-~~ 99 (178)
-+..||.-.+.. +.+.+++++..|.|++. +|.|...+.+.|+++.++..|..+++.+++.|+.+|+|++.++.++ ..
T Consensus 55 ~i~~L~~lL~~~-~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 133 (252)
T 4db8_A 55 ALPALVQLLSSP-NEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQA 133 (252)
T ss_dssp HHHHHHHGGGCS-CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred cHHHHHHHHcCC-CHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHHH
Confidence 345677666555 58999999999999997 7999999999999999999999999999999999999999999999 89
Q ss_pred hhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCC--ccccccc----chHHHHHHHHhhhhcccchhHHHhHHHHHHhh
Q 030369 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSM--STKEEIL----KPEVVDVIRRYAAAESVNVSFSNLAKAFLDKH 173 (178)
Q Consensus 100 I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~--~sr~~I~----~p~ll~ll~~~~~~~~~~~~~~nla~~fL~~~ 173 (178)
+.+.|++|.|+++|+++++++...|+.+|.+|+.. ..+..+. .|+++++|. ++ ++.++..|...|...
T Consensus 134 ~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~----~~--~~~v~~~a~~~L~~l 207 (252)
T 4db8_A 134 VIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS----SP--NEQILQEALWALSNI 207 (252)
T ss_dssp HHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHGGG----CS--SHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHC----CC--CHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999964 2333333 377777764 22 456777776666655
Q ss_pred c
Q 030369 174 V 174 (178)
Q Consensus 174 ~ 174 (178)
+
T Consensus 208 ~ 208 (252)
T 4db8_A 208 A 208 (252)
T ss_dssp T
T ss_pred h
Confidence 4
No 6
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=99.53 E-value=4e-14 Score=125.52 Aligned_cols=127 Identities=20% Similarity=0.260 Sum_probs=112.7
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhcc-CcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCC-chhhHHh
Q 030369 23 LQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANAAII 100 (178)
Q Consensus 23 lq~LV~efq~t~~~e~keqvlanLaNfAy-DP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D-~~nk~~I 100 (178)
+..||.-.+ +++.+.|++++..|.|+++ ||.++..+.+.|+|+.++.+|.++++.+++.|+++|.|++.+ +.+|..|
T Consensus 4 l~~lv~~L~-s~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i 82 (457)
T 1xm9_A 4 IPKAVQYLS-SQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 82 (457)
T ss_dssp HHHHHHHHH-SSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred HHHHHHHHC-CCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 345665554 4578999999999999996 467788999999999999999999999999999999999987 9999999
Q ss_pred hhcCChhHHHHhhc-CCchhHHHHHHHHHHHhcCC-ccccccc---chHHHHHHH
Q 030369 101 TKSGGIPLIIECLS-SPVRNTVNHALGALYYLCSM-STKEEIL---KPEVVDVIR 150 (178)
Q Consensus 101 ~~~gGi~~li~lLs-S~~~evv~~AlttL~~L~~~-~sr~~I~---~p~ll~ll~ 150 (178)
.+.||||+++++|+ +++++++..|..+|++|+.. +.|..|. .|+|+++|.
T Consensus 83 ~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~~i~~g~i~~Lv~ll~ 137 (457)
T 1xm9_A 83 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVI 137 (457)
T ss_dssp HHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHHHHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCHHhHHHHHhccHHHHHHHHh
Confidence 99999999999998 88999999999999999976 5677665 599999994
No 7
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=99.53 E-value=2e-13 Score=106.99 Aligned_cols=146 Identities=17% Similarity=0.210 Sum_probs=122.0
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHhhhhccC-cccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhc-CCchhhHH
Q 030369 22 YLQELVSQFQNSTDEERKEKIVANLANFAYD-PYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNAS-VDPANAAI 99 (178)
Q Consensus 22 ylq~LV~efq~t~~~e~keqvlanLaNfAyD-P~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~-~D~~nk~~ 99 (178)
.+..|+.-.+. ++.+.+++++..|+|++.+ |.+...+.+.++++.++..|..+++.+++.|+.+|+|+| .++.++..
T Consensus 45 ~i~~L~~ll~~-~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 123 (252)
T 4hxt_A 45 GVEVLVKLLTS-TDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKA 123 (252)
T ss_dssp HHHHHHHHTTC-SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred CHHHHHHHHhC-CCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 45667766655 4699999999999999988 999999999999999999999999999999999999999 78999999
Q ss_pred hhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCC-c-cccccc----chHHHHHHHHhhhhcccchhHHHhHHHHHHhh
Q 030369 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSM-S-TKEEIL----KPEVVDVIRRYAAAESVNVSFSNLAKAFLDKH 173 (178)
Q Consensus 100 I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~-~-sr~~I~----~p~ll~ll~~~~~~~~~~~~~~nla~~fL~~~ 173 (178)
+.+.|+++.|+++|.+++++++..|+.+|.+|+.. . .+..+. .|.++++|. ++ ++.++.-|...|...
T Consensus 124 ~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~----~~--~~~v~~~a~~~L~~l 197 (252)
T 4hxt_A 124 IVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLT----ST--DSEVQKEAARALANI 197 (252)
T ss_dssp HHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT----CS--CHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCcCHHHHHHHHC----CC--CHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999964 2 334444 366666653 23 456777776666655
Q ss_pred c
Q 030369 174 V 174 (178)
Q Consensus 174 ~ 174 (178)
+
T Consensus 198 ~ 198 (252)
T 4hxt_A 198 A 198 (252)
T ss_dssp T
T ss_pred H
Confidence 4
No 8
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=99.51 E-value=3.5e-13 Score=105.58 Aligned_cols=145 Identities=16% Similarity=0.244 Sum_probs=119.7
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhccC-cccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCC-chhhHHh
Q 030369 23 LQELVSQFQNSTDEERKEKIVANLANFAYD-PYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANAAII 100 (178)
Q Consensus 23 lq~LV~efq~t~~~e~keqvlanLaNfAyD-P~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D-~~nk~~I 100 (178)
+..||.-.+.. +.+.|.+++..|+|++.+ |.|...+.+.++++.++..|..+++.+++.|+.+|+|++.+ +.++..+
T Consensus 4 i~~L~~~L~~~-~~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~ 82 (252)
T 4hxt_A 4 VEKLVKLLTST-DSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAI 82 (252)
T ss_dssp HHHHHHHTTCS-CHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred HHHHHHHHcCC-CHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHH
Confidence 45677777665 489999999999999955 67999999999999999999999999999999999999998 9999999
Q ss_pred hhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCC--cccccccc----hHHHHHHHHhhhhcccchhHHHhHHHHHHhhc
Q 030369 101 TKSGGIPLIIECLSSPVRNTVNHALGALYYLCSM--STKEEILK----PEVVDVIRRYAAAESVNVSFSNLAKAFLDKHV 174 (178)
Q Consensus 101 ~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~--~sr~~I~~----p~ll~ll~~~~~~~~~~~~~~nla~~fL~~~~ 174 (178)
.+.||++.++++|+++++++...|+.+|.+|+.. ..+..+.. |.++++|+ ++ ++.++.-|...|...+
T Consensus 83 ~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~----~~--~~~~~~~a~~~L~~l~ 156 (252)
T 4hxt_A 83 VDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLT----ST--DSEVQKEAARALANIA 156 (252)
T ss_dssp HHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT----CS--CHHHHHHHHHHHHHHT
T ss_pred HHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHc----CC--CHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999943 35555553 56665553 22 3556666655554433
No 9
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=99.50 E-value=4.6e-13 Score=106.29 Aligned_cols=150 Identities=19% Similarity=0.286 Sum_probs=124.1
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHhhhhccCcccH-HHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcC-CchhhHH
Q 030369 22 YLQELVSQFQNSTDEERKEKIVANLANFAYDPYNY-TFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV-DPANAAI 99 (178)
Q Consensus 22 ylq~LV~efq~t~~~e~keqvlanLaNfAyDP~N~-~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~-D~~nk~~ 99 (178)
.+..|+.-.+. ++.+.+++++..|+|++.++.+. ..+.+.++++.+++.|..+++.+++.|+.+|+|++. ++.++..
T Consensus 97 ~i~~L~~lL~~-~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 175 (252)
T 4db8_A 97 ALPALVQLLSS-PNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQA 175 (252)
T ss_dssp HHHHHHHGGGC-SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred CHHHHHHHHcC-CCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHH
Confidence 45666666655 57899999999999999999998 999999999999999999999999999999999997 5788888
Q ss_pred hhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCC--cccccccchHHHHHHHHhhhhcccchhHHHhHHHHHHhhc
Q 030369 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSM--STKEEILKPEVVDVIRRYAAAESVNVSFSNLAKAFLDKHV 174 (178)
Q Consensus 100 I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~--~sr~~I~~p~ll~ll~~~~~~~~~~~~~~nla~~fL~~~~ 174 (178)
+.+.|+++.|+++|.++++++...|+.+|.+|+.. ..+..+....+++.|.+.-.++ +++++..|...|...+
T Consensus 176 ~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~--~~~v~~~A~~~L~~l~ 250 (252)
T 4db8_A 176 VIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHE--NEKIQKEAQEALEKLQ 250 (252)
T ss_dssp HHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHTTTTCS--SSHHHHTHHHHHHTTC
T ss_pred HHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhCCC--CHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999843 3455555444444444444433 5788888888776654
No 10
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=99.49 E-value=2.2e-13 Score=120.70 Aligned_cols=129 Identities=14% Similarity=0.164 Sum_probs=112.9
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHhhhhccC-cccHHHhhhccChHHHHhhhc-CCcHHHHHHHHHHHHhhcCCchhhHH
Q 030369 22 YLQELVSQFQNSTDEERKEKIVANLANFAYD-PYNYTFLRQLNVLELFLDCIT-EPNEKLVEFGVGGICNASVDPANAAI 99 (178)
Q Consensus 22 ylq~LV~efq~t~~~e~keqvlanLaNfAyD-P~N~~~LrqL~vidlfld~L~-~~n~~l~EfAiggLcNL~~D~~nk~~ 99 (178)
-+..||.-.+ +++.+.++.++..|.|.+++ |.|+..+.+.|+|+.|+.+|. ++++.+.|.|+++|+|||.++.+|..
T Consensus 45 ~i~~Lv~lL~-s~~~~~~~~A~~aL~nLa~~~~~~k~~i~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~~ 123 (457)
T 1xm9_A 45 GICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEE 123 (457)
T ss_dssp HHHHHHHHTT-SSCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHH
T ss_pred CHHHHHHHHc-CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCHHhHHH
Confidence 4667887666 57889999999999999987 999999999999999999999 77999999999999999999999999
Q ss_pred hhhcCChhHHHHhhc--------C--------CchhHHHHHHHHHHHhcCC-ccccccc-----chHHHHHHHHh
Q 030369 100 ITKSGGIPLIIECLS--------S--------PVRNTVNHALGALYYLCSM-STKEEIL-----KPEVVDVIRRY 152 (178)
Q Consensus 100 I~~~gGi~~li~lLs--------S--------~~~evv~~AlttL~~L~~~-~sr~~I~-----~p~ll~ll~~~ 152 (178)
|.+ ||||.|+++|. + .+++++.+|..+|.+|+.. +.|..+. .|+|+++|+..
T Consensus 124 i~~-g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~~~a~~aL~nLs~~~~~~~~i~~~~g~i~~Lv~lL~~~ 197 (457)
T 1xm9_A 124 LIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNC 197 (457)
T ss_dssp HHH-HHHHHHHHHTTHHHHTCC---------CCCHHHHHHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHH
T ss_pred HHh-ccHHHHHHHHhccccccccCccchhcccccHHHHHHHHHHHHHHccCHHHHHHHHHcCCCHHHHHHHHHhh
Confidence 999 99999999992 3 2567888999999999976 4666666 38888888753
No 11
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=99.49 E-value=1.5e-13 Score=114.94 Aligned_cols=130 Identities=15% Similarity=0.168 Sum_probs=111.9
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhcc-CcccHHHhhhccChHHHHhhhc-CCcHHHHHHHHHHHHhhcCCchhhHHh
Q 030369 23 LQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCIT-EPNEKLVEFGVGGICNASVDPANAAII 100 (178)
Q Consensus 23 lq~LV~efq~t~~~e~keqvlanLaNfAy-DP~N~~~LrqL~vidlfld~L~-~~n~~l~EfAiggLcNL~~D~~nk~~I 100 (178)
+..||.-.. +++.+.|++++..|.|.++ ++.|+..+.+.|+|++++..|. .++..++|.|++.||||+..+.+|..|
T Consensus 54 Ip~LV~lL~-s~~~~vq~~Aa~aL~nLa~~~~~nk~~I~~~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS~~~~~k~~i 132 (233)
T 3tt9_A 54 ILKLLQLLK-VQNEDVQRAVCGALRNLVFEDNDNKLEVAELNGVPRLLQVLKQTRDLETKKQITGLLWNLSSNDKLKNLM 132 (233)
T ss_dssp HHHHHHGGG-CCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSGGGHHHH
T ss_pred HHHHHHHHc-CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcChhhHHHH
Confidence 566777664 5789999999999999998 5999999999999999999997 578899999999999999999999999
Q ss_pred hhcCChhHHHHhhc----------------CCchhHHHHHHHHHHHhcC-C-ccccccc-----chHHHHHHHHhhh
Q 030369 101 TKSGGIPLIIECLS----------------SPVRNTVNHALGALYYLCS-M-STKEEIL-----KPEVVDVIRRYAA 154 (178)
Q Consensus 101 ~~~gGi~~li~lLs----------------S~~~evv~~AlttL~~L~~-~-~sr~~I~-----~p~ll~ll~~~~~ 154 (178)
.+ +|||+|++++. +.++++..+|..+|.+|.. + +.|..+. +|+|+.+++..-.
T Consensus 133 ~~-~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~v~~na~~~L~nLss~~~~~R~~~r~~~Gli~~Lv~~l~~~~~ 208 (233)
T 3tt9_A 133 IT-EALLTLTENIIIPFSGWPEGDYPKANGLLDFDIFYNVTGCLRNMSSAGADGRKAMRRCDGLIDSLVHYVRGTIA 208 (233)
T ss_dssp HH-HHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHHHHHHHHHHHHTTSCHHHHHHHHTSTTHHHHHHHHHHHHHH
T ss_pred Hh-ccHHHHHHHHhccccCCcccccccccccchHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCcHHHHHHHHHhhhh
Confidence 97 58999998763 2367999999999999986 3 5899887 4788888876543
No 12
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=99.45 E-value=3.5e-13 Score=117.81 Aligned_cols=146 Identities=16% Similarity=0.206 Sum_probs=121.7
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhcc-CcccHHHhh-hccChHHHHhhhcCCcH----HHHHHHHHHHHhhcC----
Q 030369 23 LQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLR-QLNVLELFLDCITEPNE----KLVEFGVGGICNASV---- 92 (178)
Q Consensus 23 lq~LV~efq~t~~~e~keqvlanLaNfAy-DP~N~~~Lr-qL~vidlfld~L~~~n~----~l~EfAiggLcNL~~---- 92 (178)
+..||.-...+++.+.++.++..|+|.++ ++.|+..+. ..|+|+.++..|..+++ .+++.|+++|.|+|.
T Consensus 172 Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~ 251 (354)
T 3nmw_A 172 VKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIAT 251 (354)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHccChhhhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccC
Confidence 45677766677789999999999999998 789999888 79999999999997654 599999999999995
Q ss_pred CchhhHHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcC-C-ccccccc----chHHHHHHHHhhhhcccchhHHHhH
Q 030369 93 DPANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCS-M-STKEEIL----KPEVVDVIRRYAAAESVNVSFSNLA 166 (178)
Q Consensus 93 D~~nk~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~-~-~sr~~I~----~p~ll~ll~~~~~~~~~~~~~~nla 166 (178)
++.+++.|.+.||||+|+++|.+++.+++.+|..+|.+|+. + +.+..|. .|+|+++|+. + +.+++.-|
T Consensus 252 ~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~i~~Lv~LL~s----~--~~~i~~~A 325 (354)
T 3nmw_A 252 NEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHS----K--HKMIAMGS 325 (354)
T ss_dssp CHHHHHHHHTTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTHHHHHHTTTTC----S--SHHHHHHH
T ss_pred CHHHHHHHHHcCCHHHHHHHHcCCChHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHhC----C--CHHHHHHH
Confidence 89999999999999999999999999999999999999994 3 5676676 4888887742 2 35666666
Q ss_pred HHHHHhhc
Q 030369 167 KAFLDKHV 174 (178)
Q Consensus 167 ~~fL~~~~ 174 (178)
..-|..-+
T Consensus 326 ~~aL~nL~ 333 (354)
T 3nmw_A 326 AAALRNLM 333 (354)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66555443
No 13
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=99.41 E-value=1.5e-12 Score=121.60 Aligned_cols=128 Identities=13% Similarity=0.172 Sum_probs=111.5
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhcc--CcccHHHhhhccChHHHHhhhcC-CcHHHHHHHHHHHHhhcCCchhhHH
Q 030369 23 LQELVSQFQNSTDEERKEKIVANLANFAY--DPYNYTFLRQLNVLELFLDCITE-PNEKLVEFGVGGICNASVDPANAAI 99 (178)
Q Consensus 23 lq~LV~efq~t~~~e~keqvlanLaNfAy--DP~N~~~LrqL~vidlfld~L~~-~n~~l~EfAiggLcNL~~D~~nk~~ 99 (178)
+..||.-.. +++.+.|++++..|.|.|+ |+.|+..+++.|+|+.++..|.+ .+..++|.|+++|+||+.++.+|..
T Consensus 92 Ip~LV~LL~-s~~~~vq~~Aa~AL~nLa~~~~~~nk~~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~~~~~k~~ 170 (584)
T 3l6x_A 92 IPVLVGLLD-HPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIKME 170 (584)
T ss_dssp HHHHHHGGG-CSSHHHHHHHHHHHHHHTSSSCHHHHHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTSGGGHHH
T ss_pred cHHHHHHHC-CCCHHHHHHHHHHHHHHHccCCHHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhhHH
Confidence 456777664 5689999999999999998 49999999999999999999996 5788999999999999999999999
Q ss_pred hhhcCChhHHHHhhc------------------CCchhHHHHHHHHHHHhcCC--ccccccc-----chHHHHHHHHh
Q 030369 100 ITKSGGIPLIIECLS------------------SPVRNTVNHALGALYYLCSM--STKEEIL-----KPEVVDVIRRY 152 (178)
Q Consensus 100 I~~~gGi~~li~lLs------------------S~~~evv~~AlttL~~L~~~--~sr~~I~-----~p~ll~ll~~~ 152 (178)
|.+ ||||+|+++|. +++++++.+|..+|.+|+.. ..|..|. .|+|+.+|+..
T Consensus 171 I~~-~alp~Lv~LL~~p~sg~~~~~~~~~k~~~~~d~~V~~nAa~~L~NLs~~~~~~R~~i~~~~Gli~~LV~~L~~~ 247 (584)
T 3l6x_A 171 IVD-HALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAE 247 (584)
T ss_dssp HHH-HTHHHHHHHTHHHHHCCC----------CCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHSTTHHHHHHHHHHHH
T ss_pred HHh-ccHHHHHHHHhcccccccccccccccccccccHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCcHHHHHHHHHHh
Confidence 996 68999999872 34689999999999999965 3588777 37899998864
No 14
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=99.37 E-value=4.3e-12 Score=110.90 Aligned_cols=127 Identities=18% Similarity=0.312 Sum_probs=110.0
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhcc--CcccHHHhhhccChHHHHhhh-cCCcHHHHHHHHHHHHhhcC-CchhhH
Q 030369 23 LQELVSQFQNSTDEERKEKIVANLANFAY--DPYNYTFLRQLNVLELFLDCI-TEPNEKLVEFGVGGICNASV-DPANAA 98 (178)
Q Consensus 23 lq~LV~efq~t~~~e~keqvlanLaNfAy--DP~N~~~LrqL~vidlfld~L-~~~n~~l~EfAiggLcNL~~-D~~nk~ 98 (178)
+..||.-.+ +++.+.|+++...|.|.++ |+.|+..+.+.|+|+.+++.| ..+++.+++.|+++|+||+. ++.+|.
T Consensus 129 Ip~LV~LL~-s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~nk~ 207 (354)
T 3nmw_A 129 MRALVAQLK-SESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKA 207 (354)
T ss_dssp HHHHHHGGG-CSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHC-CCCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccChhhhH
Confidence 667887665 6789999999999999998 489999999999999999985 56788999999999999998 778999
Q ss_pred Hhh-hcCChhHHHHhhcCCch----hHHHHHHHHHHHhcC-----Cccccccc----chHHHHHHH
Q 030369 99 IIT-KSGGIPLIIECLSSPVR----NTVNHALGALYYLCS-----MSTKEEIL----KPEVVDVIR 150 (178)
Q Consensus 99 ~I~-~~gGi~~li~lLsS~~~----evv~~AlttL~~L~~-----~~sr~~I~----~p~ll~ll~ 150 (178)
.|. +.||||.|+++|+++++ +++.+|..+|.+|+. ++.|..|. .|+++++|+
T Consensus 208 ~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~ 273 (354)
T 3nmw_A 208 DICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLK 273 (354)
T ss_dssp HHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTT
T ss_pred HHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHHHHHHHHc
Confidence 998 79999999999977654 589999999999983 35676666 499999886
No 15
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=99.37 E-value=2e-12 Score=117.07 Aligned_cols=147 Identities=16% Similarity=0.209 Sum_probs=123.5
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhcc-CcccHHHhh-hccChHHHHhhhcCCcH----HHHHHHHHHHHhhcC----
Q 030369 23 LQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLR-QLNVLELFLDCITEPNE----KLVEFGVGGICNASV---- 92 (178)
Q Consensus 23 lq~LV~efq~t~~~e~keqvlanLaNfAy-DP~N~~~Lr-qL~vidlfld~L~~~n~----~l~EfAiggLcNL~~---- 92 (178)
+..||.-...+++.+.++.++..|+|.+. ++.|+..+. +.|+|+.++..|..+++ .+++.|+++|.|++.
T Consensus 288 I~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~ 367 (458)
T 3nmz_A 288 VKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIAT 367 (458)
T ss_dssp HHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccC
Confidence 45677766677789999999999999998 889999998 79999999999997654 499999999999994
Q ss_pred CchhhHHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcC-C-ccccccc----chHHHHHHHHhhhhcccchhHHHhH
Q 030369 93 DPANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCS-M-STKEEIL----KPEVVDVIRRYAAAESVNVSFSNLA 166 (178)
Q Consensus 93 D~~nk~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~-~-~sr~~I~----~p~ll~ll~~~~~~~~~~~~~~nla 166 (178)
++.+++.|.+.||||+|+++|++++.+++.+|..+|.+|+. + +.+..|. .|+|+++|+ ++ +.+++.-|
T Consensus 368 ~~~~~~~i~~~G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~I~~Lv~LL~----s~--~~~v~~~A 441 (458)
T 3nmz_A 368 NEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIH----SK--HKMIAMGS 441 (458)
T ss_dssp CHHHHHHHHHTTHHHHHHHHSSCSCHHHHHHHHHHHHHHHSSCHHHHHHHHHHTHHHHHHTTTT----CS--SHHHHHHH
T ss_pred CHHHHHHHHHcccHHHHHHHHcCCChHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHh----CC--CHHHHHHH
Confidence 89999999999999999999999999999999999999993 3 5677676 488888873 22 45777777
Q ss_pred HHHHHhhcc
Q 030369 167 KAFLDKHVT 175 (178)
Q Consensus 167 ~~fL~~~~~ 175 (178)
..-|..-++
T Consensus 442 a~AL~nL~~ 450 (458)
T 3nmz_A 442 AAALRNLMA 450 (458)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 776665544
No 16
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=99.30 E-value=1.2e-11 Score=107.19 Aligned_cols=148 Identities=22% Similarity=0.248 Sum_probs=123.2
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHhhhcCCc----------------------HHHH
Q 030369 23 LQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPN----------------------EKLV 80 (178)
Q Consensus 23 lq~LV~efq~t~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld~L~~~n----------------------~~l~ 80 (178)
+..|+.-.+..++.+.++.++..|.|++.+|.|...+.+.++++.+++.|..++ +.++
T Consensus 357 i~~L~~lL~~~~~~~v~~~a~~~l~nl~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~l~n~~~~~~~~~~~i~ 436 (529)
T 1jdh_A 357 LPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIV 436 (529)
T ss_dssp HHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGGGHHHHHHTTHHHHHHHHHHHHHHHHC-----------CBTTBCHHHHH
T ss_pred hhHHHHHhccccchHHHHHHHHHHHHHhcChhhhHHHHHcCCHHHHHHHHHHHhHHHHHHHhcccCchhhhccccHHHHH
Confidence 566777666666678999999999999999999999999999999999997543 3455
Q ss_pred HHHHHHHHhhcCCchhhHHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCC-cccccccchHHHHHHHHhhhhcccc
Q 030369 81 EFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSM-STKEEILKPEVVDVIRRYAAAESVN 159 (178)
Q Consensus 81 EfAiggLcNL~~D~~nk~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~-~sr~~I~~p~ll~ll~~~~~~~~~~ 159 (178)
+.++++||+|+.++.++..|.+.|+++.++++|.++++++...|..+|.+|..+ ..+..|.....++.|.+...++ |
T Consensus 437 ~~~~~al~~L~~~~~~~~~l~~~~~v~~l~~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~i~~~~~~~~L~~l~~~~--~ 514 (529)
T 1jdh_A 437 EGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSR--N 514 (529)
T ss_dssp HHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHGGGCS--S
T ss_pred HHHHHHHHHHhcCchHHHHHhccCCccHHHHHHcCCchHHHHHHHHHHHHHhcCHHHHHHHHHcCChHHHHHHhcCC--C
Confidence 688899999999999999999999999999999999999999999999999866 3455565555556666666655 6
Q ss_pred hhHHHhHHHHHHh
Q 030369 160 VSFSNLAKAFLDK 172 (178)
Q Consensus 160 ~~~~nla~~fL~~ 172 (178)
+.++..|..-|++
T Consensus 515 ~~v~~~a~~aL~~ 527 (529)
T 1jdh_A 515 EGVATYAAAVLFR 527 (529)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 8898888887764
No 17
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=99.30 E-value=5.5e-12 Score=112.88 Aligned_cols=143 Identities=13% Similarity=0.136 Sum_probs=120.2
Q ss_pred cCChHHHHHHHHHHhhhhcc-CcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcC--CchhhHHhhhcCChhH
Q 030369 32 NSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV--DPANAAIITKSGGIPL 108 (178)
Q Consensus 32 ~t~~~e~keqvlanLaNfAy-DP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~--D~~nk~~I~~~gGi~~ 108 (178)
.+++.+.|+.+...|+|.+. ++.+...+.+.|+++.++.+|..++..+++.|+.+|+|++. ++....++.+.|+|++
T Consensus 345 ~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~~~~~~~~~l~~~g~i~~ 424 (529)
T 3tpo_A 345 TNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTSGGTVEQIVYLVHCGIIEP 424 (529)
T ss_dssp TCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHH
T ss_pred cCCCHHHHHHHHHHHHHHhcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCcCHHH
Confidence 35688899999999999985 78888999999999999999999999999999999999985 6788889999999999
Q ss_pred HHHhhcCCchhHHHHHHHHHHHhcCCc----cccc----ccchHHHHHHHHhhhhcccchhHHHhHHHHHHhhccC
Q 030369 109 IIECLSSPVRNTVNHALGALYYLCSMS----TKEE----ILKPEVVDVIRRYAAAESVNVSFSNLAKAFLDKHVTE 176 (178)
Q Consensus 109 li~lLsS~~~evv~~AlttL~~L~~~~----sr~~----I~~p~ll~ll~~~~~~~~~~~~~~nla~~fL~~~~~~ 176 (178)
|+++|+++|++++..++.+|.+++.-. .... |..--.++.|+.++.|+ |..|..+|.-+||+|.+.
T Consensus 425 L~~LL~~~d~~i~~~~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~Lq~~~--n~~i~~~A~~iie~yf~~ 498 (529)
T 3tpo_A 425 LMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHE--NESVYKASLNLIEKYFSV 498 (529)
T ss_dssp HHHGGGCSCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTCHHHHTGGGGCS--SHHHHHHHHHHHHHHC--
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHhHhccChHHHHHHHHHCCcHHHHHHHHcCC--CHHHHHHHHHHHHHHCCC
Confidence 999999999999999999999987431 1111 11223467777887766 789999999999999864
No 18
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=99.30 E-value=1.4e-11 Score=105.47 Aligned_cols=147 Identities=14% Similarity=0.119 Sum_probs=119.5
Q ss_pred HHHHHHHHHHhhc-----------CChHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHh-hhcCCcHHHHHHHHHHH
Q 030369 20 LQYLQELVSQFQN-----------STDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLD-CITEPNEKLVEFGVGGI 87 (178)
Q Consensus 20 ~~ylq~LV~efq~-----------t~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld-~L~~~n~~l~EfAiggL 87 (178)
.+.++..+.-+++ +.+.|.|+.++.+|+++..++.|...+.++|+++.++. +|.++++.+++.|+.+|
T Consensus 27 ~~~mk~~l~vl~~~~~~~~~~~~~~~~~e~k~~Al~~L~~lv~~~dna~~~~~~G~l~~Lv~~lL~s~~~~vr~~Aa~~L 106 (296)
T 1xqr_A 27 VEQMKSCLRVLSQPMPPTAGEAEQAADQQEREGALELLADLCENMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLI 106 (296)
T ss_dssp HHHHHHHHHHHHSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcccccccccCCCHHHHHHHHHHHHHHHhChhhHHHHHHcCCHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4556666666665 34568899999999999999999999999999999999 99999999999999999
Q ss_pred HhhcC-CchhhHHhhhcCChhHHHHhhcC-CchhHHHHHHHHHHHhcCC--ccccccc----chHHHHHHHHhhhhcccc
Q 030369 88 CNASV-DPANAAIITKSGGIPLIIECLSS-PVRNTVNHALGALYYLCSM--STKEEIL----KPEVVDVIRRYAAAESVN 159 (178)
Q Consensus 88 cNL~~-D~~nk~~I~~~gGi~~li~lLsS-~~~evv~~AlttL~~L~~~--~sr~~I~----~p~ll~ll~~~~~~~~~~ 159 (178)
+|++- +|.++..|++.||+|+|+++|++ +++++...|+.+|.+++.. .....+. .|+|+++|+. + +
T Consensus 107 g~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~----~--d 180 (296)
T 1xqr_A 107 GTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQ----Q--V 180 (296)
T ss_dssp HHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHS----S--C
T ss_pred HHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcC----C--C
Confidence 99986 48899999999999999999974 5789999999999999854 2333444 4888888852 2 3
Q ss_pred hhHHHhHHHHHHh
Q 030369 160 VSFSNLAKAFLDK 172 (178)
Q Consensus 160 ~~~~nla~~fL~~ 172 (178)
.++..-|...|..
T Consensus 181 ~~v~~~A~~aLs~ 193 (296)
T 1xqr_A 181 QKLKVKSAFLLQN 193 (296)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4555555555543
No 19
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=99.29 E-value=1.2e-11 Score=110.50 Aligned_cols=143 Identities=13% Similarity=0.121 Sum_probs=122.4
Q ss_pred cCChHHHHHHHHHHhhhhc-cCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcC--CchhhHHhhhcCChhH
Q 030369 32 NSTDEERKEKIVANLANFA-YDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV--DPANAAIITKSGGIPL 108 (178)
Q Consensus 32 ~t~~~e~keqvlanLaNfA-yDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~--D~~nk~~I~~~gGi~~ 108 (178)
.+++.+.|+.+...|+|++ .++.+...+.+.++++.++++|..++..+++.|+.+|+|++. ++....++.+.|+|++
T Consensus 326 ~~~~~~v~~~A~~aL~nl~a~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~~~~~~~~~L~~~g~i~~ 405 (510)
T 3ul1_B 326 TNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEP 405 (510)
T ss_dssp TCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHH
T ss_pred cCCCHHHHHHHHHHHHHHHcCcHHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHH
Confidence 4567889999999999998 578889999999999999999999999999999999999986 7788889999999999
Q ss_pred HHHhhcCCchhHHHHHHHHHHHhcCCc----ccc----cccchHHHHHHHHhhhhcccchhHHHhHHHHHHhhccC
Q 030369 109 IIECLSSPVRNTVNHALGALYYLCSMS----TKE----EILKPEVVDVIRRYAAAESVNVSFSNLAKAFLDKHVTE 176 (178)
Q Consensus 109 li~lLsS~~~evv~~AlttL~~L~~~~----sr~----~I~~p~ll~ll~~~~~~~~~~~~~~nla~~fL~~~~~~ 176 (178)
|+++|++++++++..++.+|.+++... ... .|..--.++.|+..+.|+ |..+.++|.-+||+|.+.
T Consensus 406 L~~LL~~~d~~i~~~~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~Lq~~~--n~~i~~~A~~iie~yf~~ 479 (510)
T 3ul1_B 406 LMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHE--NESVYKASLNLIEKYFSV 479 (510)
T ss_dssp HHHGGGCSCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTHHHHHHHGGGCS--SHHHHHHHHHHHHHHCC-
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHhHhccchHHHHHHHHHcCcHHHHHHHHcCC--CHHHHHHHHHHHHHHCCC
Confidence 999999999999999999999988431 111 122244577888888766 789999999999999864
No 20
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=99.29 E-value=1.7e-11 Score=111.08 Aligned_cols=128 Identities=18% Similarity=0.308 Sum_probs=110.6
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHhhhhcc--CcccHHHhhhccChHHHHhhh-cCCcHHHHHHHHHHHHhhcC-Cchhh
Q 030369 22 YLQELVSQFQNSTDEERKEKIVANLANFAY--DPYNYTFLRQLNVLELFLDCI-TEPNEKLVEFGVGGICNASV-DPANA 97 (178)
Q Consensus 22 ylq~LV~efq~t~~~e~keqvlanLaNfAy--DP~N~~~LrqL~vidlfld~L-~~~n~~l~EfAiggLcNL~~-D~~nk 97 (178)
.+..||.-.+ +++.+.++++...|.|.++ |+.|+..+.+.|+|+.++++| ..+++.+++.|+++|+|||. ...+|
T Consensus 244 aIp~LV~LL~-s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~~~nk 322 (458)
T 3nmz_A 244 CMRALVAQLK-SESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENK 322 (458)
T ss_dssp HHHHHHHGGG-CSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHHHH
T ss_pred cHHHHHHHHh-CCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHHHHhcCCCHHHHHHHHHHHHHHccCCHHHH
Confidence 3677887776 6789999999999999998 589999999999999999985 55688999999999999998 78999
Q ss_pred HHhh-hcCChhHHHHhhcCCch----hHHHHHHHHHHHhcC-----Cccccccc----chHHHHHHH
Q 030369 98 AIIT-KSGGIPLIIECLSSPVR----NTVNHALGALYYLCS-----MSTKEEIL----KPEVVDVIR 150 (178)
Q Consensus 98 ~~I~-~~gGi~~li~lLsS~~~----evv~~AlttL~~L~~-----~~sr~~I~----~p~ll~ll~ 150 (178)
..|. +.||||.|+++|+++++ +++.+|..+|.+|.. +..+..|. .|+++++|+
T Consensus 323 ~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~ 389 (458)
T 3nmz_A 323 ADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLK 389 (458)
T ss_dssp HHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSS
T ss_pred HHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHHHHc
Confidence 9998 79999999999977654 489999999999983 35666665 489999885
No 21
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=99.28 E-value=1.3e-11 Score=105.68 Aligned_cols=127 Identities=11% Similarity=0.087 Sum_probs=108.3
Q ss_pred HHHHHHhhcCChHHHHHHHHHHhhhhcc-CcccHHHhhhccChHHHHhhhcC-CcHHHHHHHHHHHHhhcCC-chhhHHh
Q 030369 24 QELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITE-PNEKLVEFGVGGICNASVD-PANAAII 100 (178)
Q Consensus 24 q~LV~efq~t~~~e~keqvlanLaNfAy-DP~N~~~LrqL~vidlfld~L~~-~n~~l~EfAiggLcNL~~D-~~nk~~I 100 (178)
..||..+-.+++.+.|++++..|+|.|. ||.+...+.+.|+++.++.+|++ +++.+++.|+.+|+|+|.+ +..++.|
T Consensus 84 ~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~ 163 (296)
T 1xqr_A 84 HLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQF 163 (296)
T ss_dssp HHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 3466634457789999999999999996 59999999999999999999995 4889999999999999975 5667788
Q ss_pred hhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCC--ccccccc----chHHHHHHH
Q 030369 101 TKSGGIPLIIECLSSPVRNTVNHALGALYYLCSM--STKEEIL----KPEVVDVIR 150 (178)
Q Consensus 101 ~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~--~sr~~I~----~p~ll~ll~ 150 (178)
.+.||||.|+.+|+++++.++..|..+|.+|+.. +.+..+. .|+|+++|.
T Consensus 164 ~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~Lv~LL~ 219 (296)
T 1xqr_A 164 LRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVR 219 (296)
T ss_dssp HHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHT
T ss_pred HHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHHHHHHHc
Confidence 8899999999999999999999999999999843 3445554 488888874
No 22
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=99.28 E-value=5.2e-11 Score=104.89 Aligned_cols=127 Identities=14% Similarity=0.175 Sum_probs=108.6
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhccC-cccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCC-chhhHHh
Q 030369 23 LQELVSQFQNSTDEERKEKIVANLANFAYD-PYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANAAII 100 (178)
Q Consensus 23 lq~LV~efq~t~~~e~keqvlanLaNfAyD-P~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D-~~nk~~I 100 (178)
+..||.-.+..++.+.|++++..|.|++.+ |.+...+.+.++++.++..|..+++.+++.|+.+|+|+|.| +.++..+
T Consensus 119 v~~Lv~lL~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~i 198 (528)
T 4b8j_A 119 VPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDLV 198 (528)
T ss_dssp HHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCChhhHHHH
Confidence 456777666665689999999999999986 99999999999999999999999999999999999999977 7789999
Q ss_pred hhcCChhHHHHhh-cCCchhHHHHHHHHHHHhcCCc-cccccc----chHHHHHH
Q 030369 101 TKSGGIPLIIECL-SSPVRNTVNHALGALYYLCSMS-TKEEIL----KPEVVDVI 149 (178)
Q Consensus 101 ~~~gGi~~li~lL-sS~~~evv~~AlttL~~L~~~~-sr~~I~----~p~ll~ll 149 (178)
.+.|+++.|+++| .++++++..+|+.+|.+|+... ...... .|.++++|
T Consensus 199 ~~~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~l~~L~~lL 253 (528)
T 4b8j_A 199 LANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTRPALPALARLI 253 (528)
T ss_dssp HHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSCCCHHHHTTHHHHHHHHT
T ss_pred HHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHH
Confidence 9999999999999 7778999999999999999762 222222 36666655
No 23
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=99.26 E-value=1.2e-10 Score=104.21 Aligned_cols=127 Identities=17% Similarity=0.210 Sum_probs=106.9
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhc-cCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCC-chhhHHh
Q 030369 23 LQELVSQFQNSTDEERKEKIVANLANFA-YDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANAAII 100 (178)
Q Consensus 23 lq~LV~efq~t~~~e~keqvlanLaNfA-yDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D-~~nk~~I 100 (178)
+..||.-.+.+++.+.|..+...|+|.| .+|.|...+.+.|+|+.|+.+|.++++.++|.|+.+|+|++.| +.++..|
T Consensus 102 ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~~r~~v 181 (510)
T 3ul1_B 102 IPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLV 181 (510)
T ss_dssp HHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 4457877888888999999999999998 5799999999999999999999999999999999999999987 8889999
Q ss_pred hhcCChhHHHHhhcCCchh-----HHHHHHHHHHHhcCCc-cccccc-----chHHHHHH
Q 030369 101 TKSGGIPLIIECLSSPVRN-----TVNHALGALYYLCSMS-TKEEIL-----KPEVVDVI 149 (178)
Q Consensus 101 ~~~gGi~~li~lLsS~~~e-----vv~~AlttL~~L~~~~-sr~~I~-----~p~ll~ll 149 (178)
.+.||+++++.+|++++.+ ++.++..++.+++... ....+. .|.|+++|
T Consensus 182 ~~~G~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL 241 (510)
T 3ul1_B 182 IKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLL 241 (510)
T ss_dssp HHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHHHHHHHHT
T ss_pred HHcCChHHHHHHHHhccchhhhHHHHHHHHHHHHHHhhcccchhHHHHHHhHHHHHHHHH
Confidence 9999999999999877643 5678888999998652 333332 35555555
No 24
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=99.26 E-value=1.8e-11 Score=106.12 Aligned_cols=132 Identities=16% Similarity=0.250 Sum_probs=116.8
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCC-chhhHH
Q 030369 21 QYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANAAI 99 (178)
Q Consensus 21 ~ylq~LV~efq~t~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D-~~nk~~ 99 (178)
..+..||.-.+.+++.+.++.++..|.|++.+|.|...+.+.|+++.++..|..+++.+++.|+.+|+|+|.+ +..+..
T Consensus 59 ~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 138 (529)
T 1jdh_A 59 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMA 138 (529)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHH
T ss_pred chHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcchHHH
Confidence 5788888888877789999999999999999999999999999999999999999999999999999999987 677888
Q ss_pred hhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcC--Cccccccc----chHHHHHHHHh
Q 030369 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYLCS--MSTKEEIL----KPEVVDVIRRY 152 (178)
Q Consensus 100 I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~--~~sr~~I~----~p~ll~ll~~~ 152 (178)
+.+.|++|.++++|.++++++...+..+|.+|.. ++.+..+. .|+++++|+..
T Consensus 139 i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la~~~~~~~~~i~~~~~i~~L~~ll~~~ 197 (529)
T 1jdh_A 139 VRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTY 197 (529)
T ss_dssp HHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHC
T ss_pred HHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHhC
Confidence 8899999999999999999998888889988874 34565555 48888888754
No 25
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=99.21 E-value=9e-11 Score=107.00 Aligned_cols=149 Identities=22% Similarity=0.230 Sum_probs=122.1
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHhhhcCC----------------------cHHH
Q 030369 22 YLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEP----------------------NEKL 79 (178)
Q Consensus 22 ylq~LV~efq~t~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld~L~~~----------------------n~~l 79 (178)
.+..|+.-.+..++.+.++.++..|+|++.+|.|...+.+.++++.+++.|..+ ++.+
T Consensus 353 ~l~~L~~lL~~~~~~~v~~~a~~~L~nLa~~~~~~~~i~~~~~i~~Lv~lL~~~~~~vr~~a~~al~n~~~~~~~~~~~v 432 (644)
T 2z6h_A 353 GLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEI 432 (644)
T ss_dssp HHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGGGHHHHHHTTHHHHHHHHHHHHHHHHTTC----------CCSSCHHHH
T ss_pred ChHHHHHHhCccCchHHHHHHHHHHHHHccCHHHHHHHHHcCCHHHHHHHHhccchhhhhHhhhccccchhcccccHHHH
Confidence 467777777776667899999999999999999999999999999999999753 4678
Q ss_pred HHHHHHHHHhhcCCchhhHHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCC-cccccccchHHHHHHHHhhhhccc
Q 030369 80 VEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSM-STKEEILKPEVVDVIRRYAAAESV 158 (178)
Q Consensus 80 ~EfAiggLcNL~~D~~nk~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~-~sr~~I~~p~ll~ll~~~~~~~~~ 158 (178)
++.|.++|+||+.++.++..|.+.|+|++|+++|.+++++++..|..+|.+|..+ +.+..|...-.++.|.+...++
T Consensus 433 ~~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~i~~~g~l~~L~~ll~~~-- 510 (644)
T 2z6h_A 433 VEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSR-- 510 (644)
T ss_dssp HHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSHHHHHHHHHTTCHHHHHHHTTCS--
T ss_pred HHHHHHHHHHHhcCHHHHHHHHhCCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCHHHHHHHHHcCChhHHHHHHcCC--
Confidence 8999999999999999999999999999999999999999999999999999866 3455555333344444444544
Q ss_pred chhHHHhHHHHHHh
Q 030369 159 NVSFSNLAKAFLDK 172 (178)
Q Consensus 159 ~~~~~nla~~fL~~ 172 (178)
|+.++..|..-|..
T Consensus 511 ~~~vr~~A~~aL~~ 524 (644)
T 2z6h_A 511 NEGVATYAAAVLFR 524 (644)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 67787777666644
No 26
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=99.20 E-value=2.9e-10 Score=101.72 Aligned_cols=127 Identities=17% Similarity=0.203 Sum_probs=106.9
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhcc-CcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCC-chhhHHh
Q 030369 23 LQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANAAII 100 (178)
Q Consensus 23 lq~LV~efq~t~~~e~keqvlanLaNfAy-DP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D-~~nk~~I 100 (178)
+..||.-.+.+++.+.|..++..|+|+|. ++.+...+.+.|+|+.|+.+|.++++.++|.|+.+|+|++.| +.++..|
T Consensus 121 ip~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~~~~~~~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~~r~~i 200 (529)
T 3tpo_A 121 IPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAGSAFRDLV 200 (529)
T ss_dssp HHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 45688888888889999999999999994 688999999999999999999999999999999999999986 8999999
Q ss_pred hhcCChhHHHHhhcCCch-----hHHHHHHHHHHHhcCC-ccccccc-----chHHHHHH
Q 030369 101 TKSGGIPLIIECLSSPVR-----NTVNHALGALYYLCSM-STKEEIL-----KPEVVDVI 149 (178)
Q Consensus 101 ~~~gGi~~li~lLsS~~~-----evv~~AlttL~~L~~~-~sr~~I~-----~p~ll~ll 149 (178)
.+.||+++++.+|++++. .++.++..++.+++.. .....+. .|.|+++|
T Consensus 201 ~~~g~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL 260 (529)
T 3tpo_A 201 IKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLL 260 (529)
T ss_dssp HHTTCHHHHHHTTCSSCGGGSCHHHHHHHHHHHHHHHCCCTTCCCHHHHHHHHHHHHHHT
T ss_pred HHcCCcHHHHHHHhccchhHhHHHHHHHHHHHHHHHHhcccchhhHHHHhhHHHHHHHHh
Confidence 999999999999977653 3567888899999865 2233222 36666655
No 27
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=99.20 E-value=7.7e-11 Score=103.79 Aligned_cols=152 Identities=14% Similarity=0.156 Sum_probs=126.0
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhcc-CcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcC--CchhhHH
Q 030369 23 LQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV--DPANAAI 99 (178)
Q Consensus 23 lq~LV~efq~t~~~e~keqvlanLaNfAy-DP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~--D~~nk~~ 99 (178)
+..|+.-.+...+.+.++.+...|.|++. ++.....+.+.++++.+++.|..+++.+++.|+.+|+|++. ++....+
T Consensus 330 l~~L~~lL~~~~~~~v~~~A~~~L~nl~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~~ 409 (528)
T 4b8j_A 330 LPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKY 409 (528)
T ss_dssp HHHHHHHHHSCCCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 45566655555488999999999999994 68888899999999999999999999999999999999986 4899999
Q ss_pred hhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCCc-c------------cccccchHHHHHHHHhhhhcccchhHHHhH
Q 030369 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSMS-T------------KEEILKPEVVDVIRRYAAAESVNVSFSNLA 166 (178)
Q Consensus 100 I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~~-s------------r~~I~~p~ll~ll~~~~~~~~~~~~~~nla 166 (178)
+.+.|+++.|+++|.+++++++..++.+|.+++... . ...|...-.++.+..+..++ |..+...|
T Consensus 410 l~~~~~i~~L~~lL~~~d~~v~~~al~~L~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~L~~~~--~~~v~~~a 487 (528)
T 4b8j_A 410 LVSEGCIKPLCDLLICPDIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQSHD--NNEIYEKA 487 (528)
T ss_dssp HHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHTTHHHHHHHGGGCS--SHHHHHHH
T ss_pred HHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHCCcHHHHHHHHcCC--CHHHHHHH
Confidence 999999999999999999999999999999998542 1 11222344566777777655 78999999
Q ss_pred HHHHHhhccC
Q 030369 167 KAFLDKHVTE 176 (178)
Q Consensus 167 ~~fL~~~~~~ 176 (178)
...|+.|...
T Consensus 488 ~~il~~~~~~ 497 (528)
T 4b8j_A 488 VKILEAYWMD 497 (528)
T ss_dssp HHHHHHHCC-
T ss_pred HHHHHHHCCC
Confidence 9999998764
No 28
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=99.20 E-value=6.8e-11 Score=111.61 Aligned_cols=149 Identities=22% Similarity=0.248 Sum_probs=120.2
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHhhhcCCc----------------------HHHH
Q 030369 23 LQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPN----------------------EKLV 80 (178)
Q Consensus 23 lq~LV~efq~t~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld~L~~~n----------------------~~l~ 80 (178)
+..|+.-....+..+.++.+...|+|++.+|.|...+.+.++++.+++.|..++ +.++
T Consensus 490 l~~L~~lL~~~~~~~v~~~A~~aL~nLa~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~aa~al~nq~~~~~~~~~~v~ 569 (780)
T 2z6g_A 490 LPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIV 569 (780)
T ss_dssp HHHHHHTTSTTCCHHHHHHHHHHHHHHHSSHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTC------CCSTTCCHHHHH
T ss_pred HHHHHHHhcCCChHHHHHHHHHHHHHHhcCHHHHHHHHHCCCHHHHHHHHHhcchhHHHHHhhccccchhhcccChHHHH
Confidence 566777676666669999999999999999999999999999999999997532 4578
Q ss_pred HHHHHHHHhhcCCchhhHHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCC-cccccccchHHHHHHHHhhhhcccc
Q 030369 81 EFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSM-STKEEILKPEVVDVIRRYAAAESVN 159 (178)
Q Consensus 81 EfAiggLcNL~~D~~nk~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~-~sr~~I~~p~ll~ll~~~~~~~~~~ 159 (178)
+.|+++|+|||.++.++..|.+.|+|++|+++|.+++++++..|..+|.+|..+ ..+..|...-.++.|.+...++ |
T Consensus 570 ~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~~~~~~i~~~g~i~~L~~Ll~~~--~ 647 (780)
T 2z6g_A 570 EACTGALHILARDIHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSR--N 647 (780)
T ss_dssp HHHHHHHHHHTTSHHHHHHHHHTCCHHHHHHGGGCSCHHHHHHHHHHHHHHHTSHHHHHHHHHTTCHHHHHHGGGCS--C
T ss_pred HHHHHHHHHHhcChhhHHHHHHCCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCHHHHHHHHHCCCHHHHHHHHcCC--C
Confidence 999999999999999999999999999999999999999999999999999866 3555555433344444444444 5
Q ss_pred hhHHHhHHHHHHhh
Q 030369 160 VSFSNLAKAFLDKH 173 (178)
Q Consensus 160 ~~~~nla~~fL~~~ 173 (178)
+.++..|..-|...
T Consensus 648 ~~Vr~~A~~aL~~l 661 (780)
T 2z6g_A 648 EGVATYAAAVLFRM 661 (780)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 67776666655543
No 29
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=99.18 E-value=3.3e-10 Score=100.18 Aligned_cols=128 Identities=15% Similarity=0.177 Sum_probs=109.2
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHhhhhcc-CcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCC-chhhHH
Q 030369 22 YLQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANAAI 99 (178)
Q Consensus 22 ylq~LV~efq~t~~~e~keqvlanLaNfAy-DP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D-~~nk~~ 99 (178)
.+..||.-.+..++.+.|++++..|+|++. +|.+...+.+.++++.|+.+|.++++.+++.|+.+|+|+|.+ +.++..
T Consensus 131 ~i~~Lv~~L~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~ 210 (530)
T 1wa5_B 131 VVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDY 210 (530)
T ss_dssp CHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCccchHH
Confidence 456677766665588999999999999996 588999999999999999999999999999999999999987 789999
Q ss_pred hhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCCc--cccccc----chHHHHHH
Q 030369 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSMS--TKEEIL----KPEVVDVI 149 (178)
Q Consensus 100 I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~~--sr~~I~----~p~ll~ll 149 (178)
+.+.|+++.|+++|.++++++..+|+.+|.+|+... ....+. .|+++++|
T Consensus 211 ~~~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~l~~L~~lL 266 (530)
T 1wa5_B 211 VLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLI 266 (530)
T ss_dssp HHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHT
T ss_pred HHHcCcHHHHHHHhccCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHhHHHHHHHHH
Confidence 999999999999999889999999999999999542 222222 36666665
No 30
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=99.15 E-value=2e-10 Score=104.69 Aligned_cols=122 Identities=23% Similarity=0.282 Sum_probs=105.4
Q ss_pred ChHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHhhhcCChhHHHHhh
Q 030369 34 TDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECL 113 (178)
Q Consensus 34 ~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I~~~gGi~~li~lL 113 (178)
++++.++.++..|+|++.++.|...+++.++++.|++.|.++++.+++.|.++|+|++.|+..+..|.+.||++.|++++
T Consensus 428 ~~~~v~~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~i~~~g~l~~L~~ll 507 (644)
T 2z6h_A 428 RMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELL 507 (644)
T ss_dssp CHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSHHHHHHHHHTTCHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHhcCHHHHHHHHhCCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCHHHHHHHHHcCChhHHHHHH
Confidence 57888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHhcCCcccccccchHHHHHHHHhhhhc
Q 030369 114 SSPVRNTVNHALGALYYLCSMSTKEEILKPEVVDVIRRYAAAE 156 (178)
Q Consensus 114 sS~~~evv~~AlttL~~L~~~~sr~~I~~p~ll~ll~~~~~~~ 156 (178)
.++++++...|..+|.+|..+.. .....---++++.+|-.++
T Consensus 508 ~~~~~~vr~~A~~aL~~l~~~~~-~~~~~~~~~~il~~~~~~~ 549 (644)
T 2z6h_A 508 HSRNEGVATYAAAVLFRMSEDKP-QDYKKRLSVELTSSLFRTE 549 (644)
T ss_dssp TCSCHHHHHHHHHHHHHHTTTSC-HHHHHHHHHHHHHHHSCCS
T ss_pred cCCCHHHHHHHHHHHHHHhccCc-HhhhcccchHHHHHHHhCC
Confidence 99999999999999999987642 1111100256666655533
No 31
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=99.11 E-value=2.4e-09 Score=90.71 Aligned_cols=130 Identities=14% Similarity=0.130 Sum_probs=110.1
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhcc-CcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCC-chhhH
Q 030369 21 QYLQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANAA 98 (178)
Q Consensus 21 ~ylq~LV~efq~t~~~e~keqvlanLaNfAy-DP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D-~~nk~ 98 (178)
..+..||.-.+..++.+.|..++..|.|++. +|.+...+.+.++++.++..|..+++.+++.|+.+|+|++.+ +.++.
T Consensus 64 ~~i~~L~~~L~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~ 143 (450)
T 2jdq_A 64 GVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRD 143 (450)
T ss_dssp THHHHHHHHHTCTTCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CcHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCHHHHH
Confidence 4577788777776688999999999999996 688998899999999999999999999999999999999977 67899
Q ss_pred HhhhcCChhHHHHhhcC-CchhHHHHHHHHHHHhcCCc---cccccc---chHHHHHHH
Q 030369 99 IITKSGGIPLIIECLSS-PVRNTVNHALGALYYLCSMS---TKEEIL---KPEVVDVIR 150 (178)
Q Consensus 99 ~I~~~gGi~~li~lLsS-~~~evv~~AlttL~~L~~~~---sr~~I~---~p~ll~ll~ 150 (178)
.+.+.|+++.++++|.+ +++++...|+.+|.+|+... .+..+. .|+++++|.
T Consensus 144 ~~~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~ 202 (450)
T 2jdq_A 144 YVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLF 202 (450)
T ss_dssp HHHHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCCGGGTGGGHHHHHHHTT
T ss_pred HHHHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHc
Confidence 99999999999999975 78999999999999999532 222222 366776663
No 32
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=99.09 E-value=4.6e-10 Score=105.94 Aligned_cols=101 Identities=25% Similarity=0.313 Sum_probs=97.0
Q ss_pred hHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHhhhcCChhHHHHhhc
Q 030369 35 DEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLS 114 (178)
Q Consensus 35 ~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I~~~gGi~~li~lLs 114 (178)
.++.++.++..|+|++.+|.|...|++.++++.|+++|.++++.+++.|.++|+||+.|+..+..|.+.||++.|++++.
T Consensus 565 ~~~v~~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~~~~~~i~~~g~i~~L~~Ll~ 644 (780)
T 2z6g_A 565 MEEIVEACTGALHILARDIHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLH 644 (780)
T ss_dssp HHHHHHHHHHHHHHHTTSHHHHHHHHHTCCHHHHHHGGGCSCHHHHHHHHHHHHHHHTSHHHHHHHHHTTCHHHHHHGGG
T ss_pred hHHHHHHHHHHHHHHhcChhhHHHHHHCCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCHHHHHHHHHCCCHHHHHHHHc
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHhcCCc
Q 030369 115 SPVRNTVNHALGALYYLCSMS 135 (178)
Q Consensus 115 S~~~evv~~AlttL~~L~~~~ 135 (178)
++++++...|..+|.++..+.
T Consensus 645 ~~~~~Vr~~A~~aL~~l~~~~ 665 (780)
T 2z6g_A 645 SRNEGVATYAAAVLFRMSEDK 665 (780)
T ss_dssp CSCHHHHHHHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999763
No 33
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=99.01 E-value=2.4e-09 Score=94.68 Aligned_cols=143 Identities=17% Similarity=0.176 Sum_probs=111.5
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhccC-cccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCc-hhhHHh
Q 030369 23 LQELVSQFQNSTDEERKEKIVANLANFAYD-PYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDP-ANAAII 100 (178)
Q Consensus 23 lq~LV~efq~t~~~e~keqvlanLaNfAyD-P~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~-~nk~~I 100 (178)
+..||.-.+ +++.+.+++++..|+|++.| |.+...+.+.++++.++..|..+++.+++.|+.+|+|+|.+. .....+
T Consensus 175 i~~Lv~lL~-~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~~~ 253 (530)
T 1wa5_B 175 VPLFIQLLY-TGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWS 253 (530)
T ss_dssp HHHHHHHHH-HCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCCCHH
T ss_pred HHHHHHHHc-CCCHHHHHHHHHHHHHHhCCCccchHHHHHcCcHHHHHHHhccCCHHHHHHHHHHHHHHhCCCCCCCcHH
Confidence 345555554 35889999999999999977 889999999999999999999999999999999999999765 455566
Q ss_pred hhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCCc--cccccc----chHHHHHHHHhhhhcccchhHHHhHHHHHHh
Q 030369 101 TKSGGIPLIIECLSSPVRNTVNHALGALYYLCSMS--TKEEIL----KPEVVDVIRRYAAAESVNVSFSNLAKAFLDK 172 (178)
Q Consensus 101 ~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~~--sr~~I~----~p~ll~ll~~~~~~~~~~~~~~nla~~fL~~ 172 (178)
...|++|.|+++|.++++++...|+.+|.+|+... ....+. .|.++++|. ++ +..++.-|.-.|-.
T Consensus 254 ~~~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~Lv~lL~----~~--~~~v~~~a~~~L~~ 325 (530)
T 1wa5_B 254 VVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLS----HE--STLVQTPALRAVGN 325 (530)
T ss_dssp HHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGG----CS--CHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcHHHHHHHHC----CC--ChhhHHHHHHHHHH
Confidence 66889999999999999999999999999999642 233333 366776663 22 34555555444443
No 34
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=99.00 E-value=5.7e-10 Score=107.72 Aligned_cols=129 Identities=10% Similarity=0.087 Sum_probs=111.1
Q ss_pred HHHHHHHhhcC-ChHHHHHHHHHHhhhhccCcccHHHhhh-ccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCch-----
Q 030369 23 LQELVSQFQNS-TDEERKEKIVANLANFAYDPYNYTFLRQ-LNVLELFLDCITEPNEKLVEFGVGGICNASVDPA----- 95 (178)
Q Consensus 23 lq~LV~efq~t-~~~e~keqvlanLaNfAyDP~N~~~Lrq-L~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~----- 95 (178)
+..|+.=.... .+.+.++.++..|++.+-||.++..++. .|+|+.++++|.+++..++.-|+..|+|++.++.
T Consensus 379 v~~l~~lL~~~~~d~~v~~~AveaLayLS~~~~vk~~lv~d~g~Ip~LV~LL~s~d~~i~~~al~~L~NLt~~~d~q~~~ 458 (810)
T 3now_A 379 AEACRRFLIKPGKDKDIRRWAADGLAYLTLDAECKEKLIEDKASIHALMDLARGGNQSCLYGVVTTFVNLCNAYEKQEML 458 (810)
T ss_dssp HHHHHHHHHCSSCCSSHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHHHHTTCGGGHHHHHHHHHHHTTCSCCCCCC
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCcHHHHHHHHccchHHHHHHHhCCCChHHHHHHHHHHHHHcCCchhhhhh
Confidence 33444444444 2788999999999999999999999996 8999999999999999999999999999998652
Q ss_pred -------------------------hh---HHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCC-ccccccc----c
Q 030369 96 -------------------------NA---AIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSM-STKEEIL----K 142 (178)
Q Consensus 96 -------------------------nk---~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~-~sr~~I~----~ 142 (178)
++ +.|++.|++|++++||+|+++++...|+.+|.++..+ +.|..|. .
T Consensus 459 ~~l~~la~~s~~~v~~~~~ld~~~~v~~r~~~VveaGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~d~~~r~~Vv~~Gai 538 (810)
T 3now_A 459 PEMIELAKFAKQHIPEEHELDDVDFINKRITVLANEGITTALCALAKTESHNSQELIARVLNAVCGLKELRGKVVQEGGV 538 (810)
T ss_dssp CSCGGGTTTTCCSCCCSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTCCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHH
T ss_pred HHHHHHHHHhhccCccccccccHHHHHHHHHHHHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHHHHHHCCCH
Confidence 23 6889999999999999999999999999999999977 5777777 4
Q ss_pred hHHHHHHHH
Q 030369 143 PEVVDVIRR 151 (178)
Q Consensus 143 p~ll~ll~~ 151 (178)
|||+++|+.
T Consensus 539 p~Lv~LL~s 547 (810)
T 3now_A 539 KALLRMALE 547 (810)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHcc
Confidence 999999963
No 35
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=98.97 E-value=1.3e-08 Score=86.21 Aligned_cols=148 Identities=14% Similarity=0.066 Sum_probs=111.8
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhccC--cccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCC-chhhHH
Q 030369 23 LQELVSQFQNSTDEERKEKIVANLANFAYD--PYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANAAI 99 (178)
Q Consensus 23 lq~LV~efq~t~~~e~keqvlanLaNfAyD--P~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D-~~nk~~ 99 (178)
+..|+.-.++.++.+.+++++..|+|++.+ |.+...+. -++++.++..|..+++.+++.|..+|+|+|.+ +.++..
T Consensus 151 i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~-~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 229 (450)
T 2jdq_A 151 LPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKV-SPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDKIQA 229 (450)
T ss_dssp HHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCCGGGT-GGGHHHHHHHTTCCCHHHHHHHHHHHHHHTSSSHHHHHH
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHH-HHHHHHHHHHHccCCHHHHHHHHHHHHHHHCCCcHHHHH
Confidence 556777677667899999999999999965 55443333 78999999999999999999999999999975 677888
Q ss_pred hhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCCc--ccccccchHHHHHHHHhhhhcccchhHHHhHHHHHHhh
Q 030369 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSMS--TKEEILKPEVVDVIRRYAAAESVNVSFSNLAKAFLDKH 173 (178)
Q Consensus 100 I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~~--sr~~I~~p~ll~ll~~~~~~~~~~~~~~nla~~fL~~~ 173 (178)
+.+.|++|.++++|.++++++...|+.+|.+++... .+..+....++..|..+-.++ +++++.-|...|...
T Consensus 230 ~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~--~~~vr~~a~~~L~~l 303 (450)
T 2jdq_A 230 VIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSSP--KESIKKEACWTISNI 303 (450)
T ss_dssp HHHTTTHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHTTCS--SHHHHHHHHHHHHHH
T ss_pred HHHcCcHHHHHHHHCCCchhHHHHHHHHHHHHhhCChHHHHHHHHCccHHHHHHHHcCC--CHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999652 233333333344333333333 356666555555443
No 36
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=98.89 E-value=4.3e-09 Score=101.65 Aligned_cols=138 Identities=6% Similarity=0.061 Sum_probs=114.2
Q ss_pred hcCChHHHHHHHHHHhhhhccCcccHHHhhh-ccChHHHHhhhcCCcHHHHHHHHHHHHhhcC-CchhhHHhhh-cCChh
Q 030369 31 QNSTDEERKEKIVANLANFAYDPYNYTFLRQ-LNVLELFLDCITEPNEKLVEFGVGGICNASV-DPANAAIITK-SGGIP 107 (178)
Q Consensus 31 q~t~~~e~keqvlanLaNfAyDP~N~~~Lrq-L~vidlfld~L~~~n~~l~EfAiggLcNL~~-D~~nk~~I~~-~gGi~ 107 (178)
..+++...|+..+.-|+|.+.+|.+...+.+ .+++++++.+|.+++..+++-|.++|+|++. ++.....|++ .||||
T Consensus 632 L~s~~~~Vq~~A~~~L~NLa~~~~~~~~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~ 711 (810)
T 3now_A 632 LMEDHLYLTRAAAQCLCNLVMSEDVIKMFEGNNDRVKFLALLCEDEDEETATACAGALAIITSVSVKCCEKILAIASWLD 711 (810)
T ss_dssp HHSCCTTHHHHHHHHHHHHTTSHHHHHHHHSSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHH
T ss_pred HcCCCHHHHHHHHHHHHHHhCChHHHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCHH
Confidence 3456788999999999999999999998886 7999999999999999999999999999998 7888888888 89999
Q ss_pred HHHHhhcCCchhHHHHHHHHHHHhcCC--cccccccc----hHHHHHHHHhhhhcccchhHHHhHHHHHH
Q 030369 108 LIIECLSSPVRNTVNHALGALYYLCSM--STKEEILK----PEVVDVIRRYAAAESVNVSFSNLAKAFLD 171 (178)
Q Consensus 108 ~li~lLsS~~~evv~~AlttL~~L~~~--~sr~~I~~----p~ll~ll~~~~~~~~~~~~~~nla~~fL~ 171 (178)
+|+++|.+++.+++..|+.++.+++.. +....|.. |++.++++. +...+.++...|.--|+
T Consensus 712 ~Lv~LL~s~d~~vq~~A~~aL~NL~~~s~e~~~~l~e~G~i~~L~~LL~~---~d~~~~~i~e~Al~aL~ 778 (810)
T 3now_A 712 ILHTLIANPSPAVQHRGIVIILNMINAGEEIAKKLFETDIMELLSGLGQL---PDDTRAKAREVATQCLA 778 (810)
T ss_dssp HHHHHHTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHTSTHHHHHTTSCCC---TTSTTHHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHhC---cccCcHHHHHHHHHHHH
Confidence 999999999999999999999999863 23444443 666666642 21124678877765554
No 37
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=98.63 E-value=8.8e-08 Score=92.35 Aligned_cols=96 Identities=14% Similarity=0.148 Sum_probs=80.9
Q ss_pred cHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHhhhcCChhHHHHhhcCCchh---HHHHHHHHHHHh
Q 030369 55 NYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRN---TVNHALGALYYL 131 (178)
Q Consensus 55 N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I~~~gGi~~li~lLsS~~~e---vv~~AlttL~~L 131 (178)
|...+.+.|||++|+.++.++++..+|-|+..|.|+|.|+.++.++.++||+++|+++|++.... +..+|..+|..|
T Consensus 449 ~~~~l~eaGvIp~Lv~Ll~S~s~~~re~A~~aL~nLS~d~~~R~~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALArL 528 (778)
T 3opb_A 449 NEKYILRTELISFLKREMHNLSPNCKQQVVRIIYNITRSKNFIPQLAQQGAVKIILEYLANKQDIGEPIRILGCRALTRM 528 (778)
T ss_dssp HHHHTTTTTHHHHHHHHGGGSCHHHHHHHHHHHHHHHTSGGGHHHHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHHH
T ss_pred HHHHHHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999877544 778999999998
Q ss_pred cCCc-c-----ccccc--chHHHHHHH
Q 030369 132 CSMS-T-----KEEIL--KPEVVDVIR 150 (178)
Q Consensus 132 ~~~~-s-----r~~I~--~p~ll~ll~ 150 (178)
.-.. . ...+. .|||+++|.
T Consensus 529 lis~np~~~f~~~~~~~aI~pLv~LL~ 555 (778)
T 3opb_A 529 LIFTNPGLIFKKYSALNAIPFLFELLP 555 (778)
T ss_dssp HHTSCHHHHSSSSCSTTHHHHHHHTSC
T ss_pred HhcCCHHHHcCCCccccchHHHHHHcC
Confidence 7221 1 11111 499999986
No 38
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=98.54 E-value=4e-07 Score=87.78 Aligned_cols=144 Identities=17% Similarity=0.201 Sum_probs=102.5
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHhhhcCCcHH---HHHHHHHHHHhhcCCchhhHH
Q 030369 23 LQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEK---LVEFGVGGICNASVDPANAAI 99 (178)
Q Consensus 23 lq~LV~efq~t~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld~L~~~n~~---l~EfAiggLcNL~~D~~nk~~ 99 (178)
+..||+.. .+++...|+++...|.|++-||.|+..+.+.|+++++|..|.+..+. ..+.|+.+|+|+......+..
T Consensus 459 Ip~Lv~Ll-~S~s~~~re~A~~aL~nLS~d~~~R~~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALArLlis~np~~~ 537 (778)
T 3opb_A 459 ISFLKREM-HNLSPNCKQQVVRIIYNITRSKNFIPQLAQQGAVKIILEYLANKQDIGEPIRILGCRALTRMLIFTNPGLI 537 (778)
T ss_dssp HHHHHHHG-GGSCHHHHHHHHHHHHHHHTSGGGHHHHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHH-cCCCHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcCCHHHH
Confidence 34577665 44688999999999999999999999999999999999999987544 899999999999743332222
Q ss_pred hhh---cCChhHHHHhhcC-Cchh-------------HHHHHHHHHHHhcCCc------ccccccc-hHHHHHHHHhhhh
Q 030369 100 ITK---SGGIPLIIECLSS-PVRN-------------TVNHALGALYYLCSMS------TKEEILK-PEVVDVIRRYAAA 155 (178)
Q Consensus 100 I~~---~gGi~~li~lLsS-~~~e-------------vv~~AlttL~~L~~~~------sr~~I~~-p~ll~ll~~~~~~ 155 (178)
|-. .|+|++|+++|+. +..+ -+..|+.+|.||.+.. .|..|.. +-.+..+..+-.+
T Consensus 538 f~~~~~~~aI~pLv~LL~~~~~~~~~~l~~~~~~~~l~~feAL~ALTNLAs~~~n~~E~~r~~Ii~~~ga~~~L~~LL~s 617 (778)
T 3opb_A 538 FKKYSALNAIPFLFELLPRSTPVDDNPLHNDEQIKLTDNYEALLALTNLASSETSDGEEVCKHIVSTKVYWSTIENLMLD 617 (778)
T ss_dssp SSSSCSTTHHHHHHHTSCCSSSCSSCC---CCCCCHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHSHHHHHHHHHGGGC
T ss_pred cCCCccccchHHHHHHcCCCCCcccccccccccccHHHHHHHHHHHHHHhcCCcccchHHHHHHHHhcCHHHHHHHHHhC
Confidence 211 3899999999972 3322 1679999999999653 2555554 3455555555454
Q ss_pred cccchhHHHhHHHH
Q 030369 156 ESVNVSFSNLAKAF 169 (178)
Q Consensus 156 ~~~~~~~~nla~~f 169 (178)
+ |..++.-|+-.
T Consensus 618 ~--n~~VrrAA~el 629 (778)
T 3opb_A 618 E--NVPLQRSTLEL 629 (778)
T ss_dssp S--SHHHHHHHHHH
T ss_pred C--CHHHHHHHHHH
Confidence 3 45555555433
No 39
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=98.48 E-value=3.4e-07 Score=85.45 Aligned_cols=154 Identities=11% Similarity=0.072 Sum_probs=113.9
Q ss_pred hHHHHHHHHHHhhcCChHHHHHHHHHHhhhhccCcccHHHhhhccChHHH-HhhhcCCcHHHHHHHHHHHHhhcCC--ch
Q 030369 19 RLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELF-LDCITEPNEKLVEFGVGGICNASVD--PA 95 (178)
Q Consensus 19 R~~ylq~LV~efq~t~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlf-ld~L~~~n~~l~EfAiggLcNL~~D--~~ 95 (178)
|-+=+.-|+...+ +++.+.|+.+...|+|++.||.+...+-+-+++... ..+|..++..+++-|+|+|-|||.+ +.
T Consensus 32 ~~~~i~Pll~~L~-S~~~~~r~~A~~al~~l~~~~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~~g~d 110 (684)
T 4gmo_A 32 REDKILPVLKDLK-SPDAKSRTTAAGAIANIVQDAKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEAD 110 (684)
T ss_dssp HHHTTHHHHHHHS-SSCCSHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHSCHH
T ss_pred chhhHHHHHHHcC-CCCHHHHHHHHHHHHHHHcCcHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhcCch
Confidence 3334556777776 457888999999999999999999999999888765 5578888999999999999999976 78
Q ss_pred hhHHhhhcCChhHHHHhhcCCc---------------------hhHHHHHHHHHHHhcCC--ccccccc----chHHHHH
Q 030369 96 NAAIITKSGGIPLIIECLSSPV---------------------RNTVNHALGALYYLCSM--STKEEIL----KPEVVDV 148 (178)
Q Consensus 96 nk~~I~~~gGi~~li~lLsS~~---------------------~evv~~AlttL~~L~~~--~sr~~I~----~p~ll~l 148 (178)
...++.+.|.+++|..+|.+.. .++..+++++|++|+.. .....|. .|+++.+
T Consensus 111 ~~~~l~~~~il~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e~s~~~~~~v~~~~~l~~l~~~ 190 (684)
T 4gmo_A 111 FCVHLYRLDVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLALARDEIHEAVATKQTILRLLFR 190 (684)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHcChHHHHHHHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhcccHHHHHHH
Confidence 8899999999999998874321 13445788899998843 2333443 3677766
Q ss_pred HHHhhhhcccchhHHHhHHHHHHhhccC
Q 030369 149 IRRYAAAESVNVSFSNLAKAFLDKHVTE 176 (178)
Q Consensus 149 l~~~~~~~~~~~~~~nla~~fL~~~~~~ 176 (178)
+..... ....+++-|.-+|-.....
T Consensus 191 L~~~~~---~~~~v~~~a~~~L~~ls~d 215 (684)
T 4gmo_A 191 LISADI---APQDIYEEAISCLTTLSED 215 (684)
T ss_dssp HHHHCC---SCHHHHHHHHHHHHHHHTT
T ss_pred HHhcCC---CcHHHHHHHHHHHHHHhcc
Confidence 654333 2356777666666554443
No 40
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=97.72 E-value=3.5e-05 Score=71.86 Aligned_cols=95 Identities=15% Similarity=0.180 Sum_probs=76.3
Q ss_pred hhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHhhhcCChhHH-HHhhcCCchhHHHHHHHHHHHhcCCc--
Q 030369 59 LRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLI-IECLSSPVRNTVNHALGALYYLCSMS-- 135 (178)
Q Consensus 59 LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I~~~gGi~~l-i~lLsS~~~evv~~AlttL~~L~~~~-- 135 (178)
+++-.++| +|+.|+++++...+.|.++|+|+|.|+.++..+...|||.++ ..+|++++.+|+..|..+|-+|+..+
T Consensus 31 ~~~~~i~P-ll~~L~S~~~~~r~~A~~al~~l~~~~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~~g~ 109 (684)
T 4gmo_A 31 LREDKILP-VLKDLKSPDAKSRTTAAGAIANIVQDAKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEA 109 (684)
T ss_dssp HHHHTTHH-HHHHHSSSCCSHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHSCH
T ss_pred cchhhHHH-HHHHcCCCCHHHHHHHHHHHHHHHcCcHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhcCc
Confidence 45555555 678899999999999999999999999999999999999765 66899999999999999999998552
Q ss_pred -cccccc----chHHHHHHHHhhh
Q 030369 136 -TKEEIL----KPEVVDVIRRYAA 154 (178)
Q Consensus 136 -sr~~I~----~p~ll~ll~~~~~ 154 (178)
....+. .||++..++....
T Consensus 110 d~~~~l~~~~il~~L~~~l~~~~~ 133 (684)
T 4gmo_A 110 DFCVHLYRLDVLTAIEHAAKAVLE 133 (684)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHcChHHHHHHHHHhhHH
Confidence 122222 3888888876433
No 41
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=97.70 E-value=0.0012 Score=50.91 Aligned_cols=131 Identities=11% Similarity=0.113 Sum_probs=75.4
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHhh
Q 030369 22 YLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIIT 101 (178)
Q Consensus 22 ylq~LV~efq~t~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I~ 101 (178)
-+..|+.-+++ ++.+.|..++..|.++.. -++++.++..|..+++.+...|+.+|.++..
T Consensus 51 ~~~~L~~~l~~-~~~~vr~~a~~aL~~~~~----------~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~--------- 110 (211)
T 3ltm_A 51 AVEPLIKALKD-EDAWVRRAAADALGQIGD----------ERAVEPLIKALKDEDGWVRQSAAVALGQIGD--------- 110 (211)
T ss_dssp GHHHHHHHTTC-SCHHHHHHHHHHHHHHCC----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHcC-CCHHHHHHHHHHHHhhCC----------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc---------
Confidence 34455555554 467777777777777652 2456667777777777777777777776642
Q ss_pred hcCChhHHHHhhcCCchhHHHHHHHHHHHhcCCccccccc----------------------chHHHHHHHHhhhhcccc
Q 030369 102 KSGGIPLIIECLSSPVRNTVNHALGALYYLCSMSTKEEIL----------------------KPEVVDVIRRYAAAESVN 159 (178)
Q Consensus 102 ~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~~sr~~I~----------------------~p~ll~ll~~~~~~~~~~ 159 (178)
.+.++.|+++|+++++.|...|+.+|-.+..++....+. .|..+..|...-..+ +
T Consensus 111 -~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~d~--~ 187 (211)
T 3ltm_A 111 -ERAVEPLIKALKDEDWFVRIAAAFALGEIGDERAVEPLIKALKDEDGWVRQSAADALGEIGGERVRAAMEKLAETG--T 187 (211)
T ss_dssp -GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCGGGHHHHHHHTTCSSHHHHHHHHHHHHHHCSHHHHHHHHHHHHHC--C
T ss_pred -HHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCchhHHHHHHHHHhCC--C
Confidence 134566666666666666666666665554321111110 144555555544433 4
Q ss_pred hhHHHhHHHHHHhhcc
Q 030369 160 VSFSNLAKAFLDKHVT 175 (178)
Q Consensus 160 ~~~~nla~~fL~~~~~ 175 (178)
+.++..|..-|.++..
T Consensus 188 ~~vr~~A~~aL~~~~~ 203 (211)
T 3ltm_A 188 GFARKVAVNYLETHKS 203 (211)
T ss_dssp HHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHhcCC
Confidence 6777777777666544
No 42
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=97.48 E-value=0.0031 Score=48.47 Aligned_cols=97 Identities=8% Similarity=0.049 Sum_probs=80.9
Q ss_pred CChHHHHHHHHHHhhcCChHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchh
Q 030369 17 TPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPAN 96 (178)
Q Consensus 17 ~~R~~ylq~LV~efq~t~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~n 96 (178)
....+-+..|+.-++ .++...|.+++..|..+.. -++++.++..|..+++.+...|+.+|.++..
T Consensus 15 ~~~~~~~~~L~~~L~-~~~~~vR~~A~~~L~~~~~----------~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~---- 79 (211)
T 3ltm_A 15 RADPEKVEMYIKNLQ-DDSYYVRRAAAYALGKIGD----------ERAVEPLIKALKDEDAWVRRAAADALGQIGD---- 79 (211)
T ss_dssp -CCGGGHHHHHHHTT-CSSHHHHHHHHHHHHHHCC----------GGGHHHHHHHTTCSCHHHHHHHHHHHHHHCC----
T ss_pred hcCHhHHHHHHHHHc-CCCHHHHHHHHHHHHHhCC----------ccHHHHHHHHHcCCCHHHHHHHHHHHHhhCC----
Confidence 344566778888887 5688999999999998764 3688999999999999999999999998852
Q ss_pred hHHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCC
Q 030369 97 AAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSM 134 (178)
Q Consensus 97 k~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~ 134 (178)
.+.++.|+++|.++++.+...|+.+|-.+..+
T Consensus 80 ------~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~~ 111 (211)
T 3ltm_A 80 ------ERAVEPLIKALKDEDGWVRQSAAVALGQIGDE 111 (211)
T ss_dssp ------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCG
T ss_pred ------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCcH
Confidence 35689999999999999999999999887654
No 43
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=97.47 E-value=0.0041 Score=47.43 Aligned_cols=90 Identities=10% Similarity=0.068 Sum_probs=57.3
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHhh
Q 030369 22 YLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIIT 101 (178)
Q Consensus 22 ylq~LV~efq~t~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I~ 101 (178)
.+..|+.-+. .++.+.|..++..|+.+.. | ++++.++..|..+++.+...|+.+|.++..
T Consensus 46 ~~~~L~~~l~-~~~~~vr~~a~~~L~~~~~-~---------~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~--------- 105 (201)
T 3ltj_A 46 AVEPLIKALK-DEDAWVRRAAADALGQIGD-E---------RAVEPLIKALKDEDGWVRQSAAVALGQIGD--------- 105 (201)
T ss_dssp GHHHHHHHTT-CSSHHHHHHHHHHHHHHCC-G---------GGHHHHHHHTTCSSHHHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHhhCC-H---------HHHHHHHHHHcCCCHHHHHHHHHHHHHhCc---------
Confidence 3445555554 4466777777777777652 2 466677777777777777777777776632
Q ss_pred hcCChhHHHHhhcCCchhHHHHHHHHHHHhc
Q 030369 102 KSGGIPLIIECLSSPVRNTVNHALGALYYLC 132 (178)
Q Consensus 102 ~~gGi~~li~lLsS~~~evv~~AlttL~~L~ 132 (178)
.+.++.|+++|+++++.|...|+.+|-.+.
T Consensus 106 -~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~ 135 (201)
T 3ltj_A 106 -ERAVEPLIKALKDEDWFVRIAAAFALGEIG 135 (201)
T ss_dssp -GGGHHHHHHHTTCSSHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHcCCCHHHHHHHHHHHHHhC
Confidence 134566666676666666666666665554
No 44
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=97.38 E-value=0.0059 Score=46.53 Aligned_cols=80 Identities=9% Similarity=0.035 Sum_probs=46.3
Q ss_pred ChHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHhhhcCChhHHHHhh
Q 030369 34 TDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECL 113 (178)
Q Consensus 34 ~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I~~~gGi~~li~lL 113 (178)
++.+.|.+++..|+.+.. -++++.++..|..+++.+...|+.+|..+.. .+.++.|+++|
T Consensus 26 ~~~~vr~~A~~~L~~~~~----------~~~~~~L~~~l~~~~~~vr~~a~~~L~~~~~----------~~~~~~L~~~l 85 (201)
T 3ltj_A 26 DSYYVRRAAAYALGKIGD----------ERAVEPLIKALKDEDAWVRRAAADALGQIGD----------ERAVEPLIKAL 85 (201)
T ss_dssp SCHHHHHHHHHHHHHHCC----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC----------GGGHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhcCC----------hhHHHHHHHHHcCCCHHHHHHHHHHHHhhCC----------HHHHHHHHHHH
Confidence 455666666666665542 1455666666666666666666666665531 13456666666
Q ss_pred cCCchhHHHHHHHHHHHhcC
Q 030369 114 SSPVRNTVNHALGALYYLCS 133 (178)
Q Consensus 114 sS~~~evv~~AlttL~~L~~ 133 (178)
.++++.+...|+.+|-.+..
T Consensus 86 ~d~~~~vr~~a~~aL~~~~~ 105 (201)
T 3ltj_A 86 KDEDGWVRQSAAVALGQIGD 105 (201)
T ss_dssp TCSSHHHHHHHHHHHHHHCC
T ss_pred cCCCHHHHHHHHHHHHHhCc
Confidence 66666666666666655543
No 45
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=97.22 E-value=0.0025 Score=60.53 Aligned_cols=150 Identities=15% Similarity=0.218 Sum_probs=118.3
Q ss_pred hHHHHHHHHHHhhcCChHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHhhhcCC--cHHHHHHHHHHHHhh-cCCch
Q 030369 19 RLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEP--NEKLVEFGVGGICNA-SVDPA 95 (178)
Q Consensus 19 R~~ylq~LV~efq~t~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld~L~~~--n~~l~EfAiggLcNL-~~D~~ 95 (178)
=-|++..|++..+.++-.|-|..++..|--|+.| |+.-.-.+.++.+++.|..+ |..++..+.--|+|+ |.|..
T Consensus 19 ~~etI~~L~~Rl~~~tl~eDRR~Av~~Lk~~sk~---y~~~Vg~~~l~~li~~L~~d~~D~e~v~~~LetL~~l~~~~~~ 95 (651)
T 3grl_A 19 EAETIQKLCDRVASSTLLDDRRNAVRALKSLSKK---YRLEVGIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNDEE 95 (651)
T ss_dssp HHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTTT---TTTHHHHHTHHHHHHHHHSCTTCHHHHHHHHHHHHHHHCCC--
T ss_pred hhhHHHHHHHHHhhccchhHHHHHHHHHHHHHHH---hHHHhhhhhHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCc
Confidence 3589999999999999999999999999999865 55556678899999999875 889999999999995 65543
Q ss_pred -----------------hh-HHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCC--c-cccccc-----chHHHHHH
Q 030369 96 -----------------NA-AIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSM--S-TKEEIL-----KPEVVDVI 149 (178)
Q Consensus 96 -----------------nk-~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~--~-sr~~I~-----~p~ll~ll 149 (178)
+. .+|-+.++|+.|+.+|.+++..+..+++.+|-.|+.. + ....|. +|.++++|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~lL~~~df~vR~~alqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL 175 (651)
T 3grl_A 96 EEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLL 175 (651)
T ss_dssp ------------CHHHHHHHHHHHSTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGG
T ss_pred ccccccccccchHHHHHHHHHHHcCCccHHHHHHHhcCccHHHHHHHHHHHHHHHhcCcHHHHHHHHhCcccHHHHHHHH
Confidence 22 4456789999999999999999999999999999843 2 345555 36777666
Q ss_pred HHhhhhcccchhHHHhHHHHHHhhccCC
Q 030369 150 RRYAAAESVNVSFSNLAKAFLDKHVTEN 177 (178)
Q Consensus 150 ~~~~~~~~~~~~~~nla~~fL~~~~~~~ 177 (178)
. +.+.-++|-|-.+|-.-+..|
T Consensus 176 ~------d~rE~iRneallLL~~Lt~~n 197 (651)
T 3grl_A 176 A------DSREVIRNDGVLLLQALTRSN 197 (651)
T ss_dssp G------CSSHHHHHHHHHHHHHHHTTC
T ss_pred h------CchHHHHHHHHHHHHHHhcCC
Confidence 2 124689999999987665544
No 46
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=97.19 E-value=0.0044 Score=58.89 Aligned_cols=132 Identities=12% Similarity=0.164 Sum_probs=90.4
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhc-cCcccHHHhhhccChHHHHhhhcCCcH-------HHHH-HHHHHHHhhcCC
Q 030369 23 LQELVSQFQNSTDEERKEKIVANLANFA-YDPYNYTFLRQLNVLELFLDCITEPNE-------KLVE-FGVGGICNASVD 93 (178)
Q Consensus 23 lq~LV~efq~t~~~e~keqvlanLaNfA-yDP~N~~~LrqL~vidlfld~L~~~n~-------~l~E-fAiggLcNL~~D 93 (178)
|=.++.+=.....-...+-++.=|+|.+ |+|.|..++||.+.++.+.-.|..+++ ++.. .++..++.+-+.
T Consensus 213 Lf~Ii~~Eg~~~Ggivv~DCL~ll~nLLr~N~sNQ~~FrEt~~i~~L~~LL~~~~~~~~W~~Qk~~N~~~~L~iIrlLv~ 292 (651)
T 3grl_A 213 LLDIITEEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKPWFEVGDENSGWSAQKVTNLHLMLQLVRVLVS 292 (651)
T ss_dssp HHHHHHHHTGGGSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCGGGGGGGGCCCSCSSCCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhcCCCccchhHHHHHHHHHHHHhcCHHHHHHHHHcCCHHHHHHHhCCCccccccHHHHHHHHHHHHHHHHHHhC
Confidence 3344443333333455666677788888 899999999999999999988875422 3333 455566666555
Q ss_pred c--------hhhHHhhhcCChhHHHHhhcCC--chhHHHHHHHHHHHhcCC--cccccc---------cchHHHHHHHHh
Q 030369 94 P--------ANAAIITKSGGIPLIIECLSSP--VRNTVNHALGALYYLCSM--STKEEI---------LKPEVVDVIRRY 152 (178)
Q Consensus 94 ~--------~nk~~I~~~gGi~~li~lLsS~--~~evv~~AlttL~~L~~~--~sr~~I---------~~p~ll~ll~~~ 152 (178)
| .|+..+.++|+++++++++.++ ...++..|+.++--++.. .....+ ..|.++.++..+
T Consensus 293 ~~~~~~~t~~nQ~~~~~~g~l~~Ll~ll~~~~~p~~i~~~Al~tla~~irgN~~~Q~~fa~~~vp~~~~~p~li~lL~~~ 372 (651)
T 3grl_A 293 PNNPPGATSSCQKAMFQCGLLQQLCTILMATGVPADILTETINTVSEVIRGCQVNQDYFASVNAPSNPPRPAIVVLLMSM 372 (651)
T ss_dssp TTSCHHHHHHHHHHHHHTTHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHCEESSSSCEEHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHCCCHHHHHHHHccCCCCHHHHHHHHHHHHHHHhCCHHHHHHHhhccCCCCCCcChHHHHHHHH
Confidence 5 5788999999999999998655 367778888888777743 122222 148899987766
Q ss_pred hh
Q 030369 153 AA 154 (178)
Q Consensus 153 ~~ 154 (178)
-.
T Consensus 373 ~~ 374 (651)
T 3grl_A 373 VN 374 (651)
T ss_dssp TC
T ss_pred hc
Confidence 43
No 47
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=97.04 E-value=0.041 Score=43.91 Aligned_cols=86 Identities=16% Similarity=0.096 Sum_probs=51.6
Q ss_pred cCChHHHHHHHHHHhhhhc-cCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHhhhcCChhHHH
Q 030369 32 NSTDEERKEKIVANLANFA-YDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLII 110 (178)
Q Consensus 32 ~t~~~e~keqvlanLaNfA-yDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I~~~gGi~~li 110 (178)
..++.+.|..++..|+++. .+|... -.+++.++..|..+++.+...|+.+|.++.. .+.++.|+
T Consensus 101 ~d~~~~vr~~a~~aL~~l~~~~~~~~-----~~~~~~L~~~l~d~~~~vR~~a~~aL~~~~~----------~~~~~~L~ 165 (280)
T 1oyz_A 101 NDKSACVRATAIESTAQRCKKNPIYS-----PKIVEQSQITAFDKSTNVRRATAFAISVIND----------KATIPLLI 165 (280)
T ss_dssp HCSCHHHHHHHHHHHHHHHHHCGGGH-----HHHHHHHHHHTTCSCHHHHHHHHHHHHTC-------------CCHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHhccCCccc-----HHHHHHHHHHhhCCCHHHHHHHHHHHHhcCC----------HHHHHHHH
Confidence 3445666666666666665 233211 1346666666766676777667766666532 13567777
Q ss_pred HhhcCCchhHHHHHHHHHHHhc
Q 030369 111 ECLSSPVRNTVNHALGALYYLC 132 (178)
Q Consensus 111 ~lLsS~~~evv~~AlttL~~L~ 132 (178)
++|.+++++|...|+.+|-.+.
T Consensus 166 ~~l~d~~~~vr~~a~~aL~~~~ 187 (280)
T 1oyz_A 166 NLLKDPNGDVRNWAAFAININK 187 (280)
T ss_dssp HHHTCSSHHHHHHHHHHHHHHT
T ss_pred HHHcCCCHHHHHHHHHHHHhhc
Confidence 7777777777777777766653
No 48
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=96.76 E-value=0.029 Score=44.79 Aligned_cols=59 Identities=10% Similarity=0.099 Sum_probs=41.8
Q ss_pred HHHHHHhhcCChHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCC
Q 030369 24 QELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD 93 (178)
Q Consensus 24 q~LV~efq~t~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D 93 (178)
..|+..+.+ ++.+.|.+++..|.++. +| ++++.++..|..+++.+...|+.+|.++..+
T Consensus 26 ~~L~~~L~~-~~~~vr~~A~~~L~~~~-~~---------~~~~~L~~~l~d~~~~vR~~A~~aL~~l~~~ 84 (280)
T 1oyz_A 26 DELFRLLDD-HNSLKRISSARVLQLRG-GQ---------DAVRLAIEFCSDKNYIRRDIGAFILGQIKIC 84 (280)
T ss_dssp HHHHHHTTC-SSHHHHHHHHHHHHHHC-CH---------HHHHHHHHHHTCSSHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHc-CCHHHHHHHHHHHHccC-Cc---------hHHHHHHHHHcCCCHHHHHHHHHHHHHhccc
Confidence 456666654 57778888888888876 32 4677777777777777777777777777643
No 49
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=96.68 E-value=0.067 Score=42.23 Aligned_cols=142 Identities=9% Similarity=-0.027 Sum_probs=94.8
Q ss_pred HHHHHHHHHHhhcCChHHHHHHHHHHhhhhccCc--ccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhh
Q 030369 20 LQYLQELVSQFQNSTDEERKEKIVANLANFAYDP--YNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANA 97 (178)
Q Consensus 20 ~~ylq~LV~efq~t~~~e~keqvlanLaNfAyDP--~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk 97 (178)
.+.+..|..-+..-++...++.++..|.-+|-.. .=..|+. .+++.+++.+.+.++.+++.|..+|-+++......
T Consensus 55 ~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l~~~~~~~~~--~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~~~~ 132 (242)
T 2qk2_A 55 GALVSALKKVITKDSNVVLVAMAGKCLALLAKGLAKRFSNYAS--ACVPSLLEKFKEKKPNVVTALREAIDAIYASTSLE 132 (242)
T ss_dssp HHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHGGGGHHHHH--HHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhhHHHHHH--HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCHH
Confidence 4567777777753357788888888888888332 2223333 47999999999999999999999999997654322
Q ss_pred HHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCCccccccc---chHHHHHHHHhhhhcccchhHHHhHHHHHH
Q 030369 98 AIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSMSTKEEIL---KPEVVDVIRRYAAAESVNVSFSNLAKAFLD 171 (178)
Q Consensus 98 ~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~~sr~~I~---~p~ll~ll~~~~~~~~~~~~~~nla~~fL~ 171 (178)
.+ +|.|...|.++++.+...++..+-.++.......+. .|.++..+...-. +.+++++..|..-+.
T Consensus 133 -~l-----l~~l~~~l~~~~~~vr~~~l~~l~~~l~~~~~~~~~~~~l~~l~p~l~~~l~--D~~~~VR~~A~~~l~ 201 (242)
T 2qk2_A 133 -AQ-----QESIVESLSNKNPSVKSETALFIARALTRTQPTALNKKLLKLLTTSLVKTLN--EPDPTVRDSSAEALG 201 (242)
T ss_dssp -HH-----HHHHHHHTTCSCHHHHHHHHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHT--SSCHHHHHHHHHHHH
T ss_pred -HH-----HHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHH
Confidence 22 567888888889999999999999866442111111 2344444433333 335677776655443
No 50
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=96.58 E-value=0.0071 Score=43.94 Aligned_cols=54 Identities=6% Similarity=-0.034 Sum_probs=24.3
Q ss_pred hHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHhhhcCChhHHHHhhcCCchhHHHHHHHHH
Q 030369 65 LELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGAL 128 (178)
Q Consensus 65 idlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I~~~gGi~~li~lLsS~~~evv~~AlttL 128 (178)
++.++..|..+++.+...|+-+|.++. | .+.++.|+++|+++++.|...|+.+|
T Consensus 75 ~~~L~~~L~d~~~~VR~~A~~aL~~~~-~---------~~a~~~L~~~l~d~~~~vr~~A~~aL 128 (131)
T 1te4_A 75 VEPLIKLLEDDSGFVRSGAARSLEQIG-G---------ERVRAAMEKLAETGTGFARKVAVNYL 128 (131)
T ss_dssp HHHHHHHHHHCCTHHHHHHHHHHHHHC-S---------HHHHHHHHHHTTSCCTHHHHHHHHHG
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhC-c---------HHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 444444444444444555554444443 1 11244444444444444444444443
No 51
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=96.38 E-value=0.028 Score=50.85 Aligned_cols=92 Identities=10% Similarity=0.109 Sum_probs=67.5
Q ss_pred ChHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcC-CchhhHHhhhcCChhHHHHh
Q 030369 34 TDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV-DPANAAIITKSGGIPLIIEC 112 (178)
Q Consensus 34 ~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~-D~~nk~~I~~~gGi~~li~l 112 (178)
++...|.-++-.|+++. +|.-...+ ++.+..+|..+++.+..-|+.|+.+++. +|.. +.+.+-++.+.++
T Consensus 98 ~n~~ir~~AL~~L~~i~-~~~~~~~l-----~~~l~~~L~d~~~~VRk~A~~al~~i~~~~p~~---~~~~~~~~~l~~l 168 (591)
T 2vgl_B 98 PNPLIRALAVRTMGCIR-VDKITEYL-----CEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQM---VEDQGFLDSLRDL 168 (591)
T ss_dssp SSHHHHHHHHHHHHTCC-SGGGHHHH-----HHHHHHHSSCSCHHHHHHHHHHHHHHHHSSCCC---HHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHcCC-hHHHHHHH-----HHHHHHHcCCCChHHHHHHHHHHHHHHhhChhh---cccccHHHHHHHH
Confidence 45555666666666664 44433332 4668888888899999999999998863 4442 2223457899999
Q ss_pred hcCCchhHHHHHHHHHHHhcCC
Q 030369 113 LSSPVRNTVNHALGALYYLCSM 134 (178)
Q Consensus 113 LsS~~~evv~~AlttL~~L~~~ 134 (178)
|+++++.|+.+|+.+|+.++..
T Consensus 169 L~d~d~~V~~~A~~aL~~i~~~ 190 (591)
T 2vgl_B 169 IADSNPMVVANAVAALSEISES 190 (591)
T ss_dssp TSCSCHHHHHHHHHHHHHHTTS
T ss_pred hCCCChhHHHHHHHHHHHHHhh
Confidence 9999999999999999999866
No 52
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=96.34 E-value=0.051 Score=49.14 Aligned_cols=130 Identities=16% Similarity=0.152 Sum_probs=87.7
Q ss_pred cCChHHHHHHHHHHhhhhcc-CcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHhhhcCChhHHH
Q 030369 32 NSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLII 110 (178)
Q Consensus 32 ~t~~~e~keqvlanLaNfAy-DP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I~~~gGi~~li 110 (178)
.+++.+.|.-+--.+.+++- +|.- -+-++..|..-|..+|+.++..|+-+||++. ++.....+ ++.+.
T Consensus 59 ~s~~~~~Krl~yl~l~~~~~~~~e~-----~~l~~n~l~kdL~~~n~~ir~~AL~~L~~i~-~~~~~~~l-----~~~l~ 127 (591)
T 2vgl_B 59 QTDNLELKKLVYLYLMNYAKSQPDM-----AIMAVNSFVKDCEDPNPLIRALAVRTMGCIR-VDKITEYL-----CEPLR 127 (591)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHSHHH-----HHTTHHHHGGGSSSSSHHHHHHHHHHHHTCC-SGGGHHHH-----HHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcccCchH-----HHHHHHHHHHHcCCCCHHHHHHHHHHHHcCC-hHHHHHHH-----HHHHH
Confidence 34566677666666666653 3332 1456788888899999999999999999997 55555555 57899
Q ss_pred HhhcCCchhHHHHHHHHHHHhcCCcccccccchHHHHHHHHhhhhcccchhHHHhHHHHHHhhcc
Q 030369 111 ECLSSPVRNTVNHALGALYYLCSMSTKEEILKPEVVDVIRRYAAAESVNVSFSNLAKAFLDKHVT 175 (178)
Q Consensus 111 ~lLsS~~~evv~~AlttL~~L~~~~sr~~I~~p~ll~ll~~~~~~~~~~~~~~nla~~fL~~~~~ 175 (178)
+||+++++.|-+.|+.+++.++.-. ...+..+.+++.+..+=..+ ++.+.--|-..|.+.+.
T Consensus 128 ~~L~d~~~~VRk~A~~al~~i~~~~-p~~~~~~~~~~~l~~lL~d~--d~~V~~~A~~aL~~i~~ 189 (591)
T 2vgl_B 128 KCLKDEDPYVRKTAAVCVAKLHDIN-AQMVEDQGFLDSLRDLIADS--NPMVVANAVAALSEISE 189 (591)
T ss_dssp HHSSCSCHHHHHHHHHHHHHHHHSS-CCCHHHHHHHHHHHHTTSCS--CHHHHHHHHHHHHHHTT
T ss_pred HHcCCCChHHHHHHHHHHHHHHhhC-hhhcccccHHHHHHHHhCCC--ChhHHHHHHHHHHHHHh
Confidence 9999999999999999999887421 11121234556665554422 45565555555555443
No 53
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=96.20 E-value=0.049 Score=45.52 Aligned_cols=151 Identities=12% Similarity=0.078 Sum_probs=96.3
Q ss_pred HHHHHHHHHHhhcCC-hHHHHHHHHHHhhhhcc--Cccc-HHHhhhccChHHHHhhhcCC--cHHHHHHHHHHHHhhcCC
Q 030369 20 LQYLQELVSQFQNST-DEERKEKIVANLANFAY--DPYN-YTFLRQLNVLELFLDCITEP--NEKLVEFGVGGICNASVD 93 (178)
Q Consensus 20 ~~ylq~LV~efq~t~-~~e~keqvlanLaNfAy--DP~N-~~~LrqL~vidlfld~L~~~--n~~l~EfAiggLcNL~~D 93 (178)
.+.+..|+.-.++.+ +.+.|+.++.-|..+.. .|.- ..++. .+++.|+.+|..+ ++.+..-|+.+++++..-
T Consensus 127 ~~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~~--~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~ 204 (462)
T 1ibr_B 127 PELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSN--EILTAIIQGMRKEEPSNNVKLAATNALLNSLEF 204 (462)
T ss_dssp TTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGGGTGGGHH--HHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCCchhhHhHHH--HHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHH
Confidence 467788888777654 78899999999998873 3321 12222 4789999999987 788999999999997421
Q ss_pred ch--hhHHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCCc-ccccccch-HHHHHHHHhhhhcccchhHHHhHHHH
Q 030369 94 PA--NAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSMS-TKEEILKP-EVVDVIRRYAAAESVNVSFSNLAKAF 169 (178)
Q Consensus 94 ~~--nk~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~~-sr~~I~~p-~ll~ll~~~~~~~~~~~~~~nla~~f 169 (178)
-. .....+..--++.+.+++.++++++...++.+|..++... ..-.-..+ .++..+...-.. .+..++..|--|
T Consensus 205 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~v~~~a~~~ 282 (462)
T 1ibr_B 205 TKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKS--DIDEVALQGIEF 282 (462)
T ss_dssp THHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHHC--SSHHHHHHHHHH
T ss_pred HHHhhhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CchHHHHHHHHH
Confidence 11 0000000001456667778888999999999998877431 11111134 566665443332 246777777777
Q ss_pred HHhhc
Q 030369 170 LDKHV 174 (178)
Q Consensus 170 L~~~~ 174 (178)
+...+
T Consensus 283 l~~~~ 287 (462)
T 1ibr_B 283 WSNVC 287 (462)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76655
No 54
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=96.19 E-value=0.02 Score=50.60 Aligned_cols=106 Identities=13% Similarity=0.071 Sum_probs=84.9
Q ss_pred HHhhhcCCcHHHHHHHHHHHHh-hcCCchhhHHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCCc-cccccc-chH
Q 030369 68 FLDCITEPNEKLVEFGVGGICN-ASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSMS-TKEEIL-KPE 144 (178)
Q Consensus 68 fld~L~~~n~~l~EfAiggLcN-L~~D~~nk~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~~-sr~~I~-~p~ 144 (178)
.++.|..++..-...|+--|-. +.-|++....+++.+|+..|+++....+.++..+++++|..|+.-. .-..|. .|.
T Consensus 123 iiekL~~~~~~~lr~aLfsLk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~~~gN~q~Y~L~AL~~LM~~v~Gm~gvvs~~~ 202 (339)
T 3dad_A 123 ILEKLYSSSGPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLFVDGMLGVVAHSD 202 (339)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHTCTTHHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSHHHHHHHHHCHH
T ss_pred HHHHHhcCCcHHHHHHHHHHHHHhhcchHHHHHHHHhccHHHHHHHHHhcChHHHHHHHHHHHHHHhccccccchhCCHH
Confidence 3456666666667778888887 7789999999999999999999998889999999999999999762 333454 699
Q ss_pred HHHHHHHhhhhcccchhHHHhHHHHHHhhcc
Q 030369 145 VVDVIRRYAAAESVNVSFSNLAKAFLDKHVT 175 (178)
Q Consensus 145 ll~ll~~~~~~~~~~~~~~nla~~fL~~~~~ 175 (178)
+++.+-++-.+ ..+.+...|-..|+-+|.
T Consensus 203 fI~~lyslv~s--~~~~V~k~AL~LL~v~V~ 231 (339)
T 3dad_A 203 TIQWLYTLCAS--LSRLVVKTALKLLLVFVE 231 (339)
T ss_dssp HHHHHHHGGGC--SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC--ccHHHHHHHHHHHHHHHc
Confidence 99999777764 357788888888877764
No 55
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=96.15 E-value=0.033 Score=51.79 Aligned_cols=153 Identities=13% Similarity=0.092 Sum_probs=100.1
Q ss_pred HHHHHHHHHHhhcCChHHHHHHHHHHhhhhccC-cccHH--Hhh--hccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCc
Q 030369 20 LQYLQELVSQFQNSTDEERKEKIVANLANFAYD-PYNYT--FLR--QLNVLELFLDCITEPNEKLVEFGVGGICNASVDP 94 (178)
Q Consensus 20 ~~ylq~LV~efq~t~~~e~keqvlanLaNfAyD-P~N~~--~Lr--qL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~ 94 (178)
.+.+..|+.-.++ ++...|+.++..|....-+ |.... ++. --.+++.|+.++.++++.++..|+.+|++++...
T Consensus 127 p~ll~~L~~~l~~-~~~~~r~~al~~L~~i~~~~~~~~~~~~~~~~~~~il~~l~~~l~~~~~~vR~~A~~aL~~~~~~~ 205 (852)
T 4fdd_A 127 PDLLPKLCSLLDS-EDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISR 205 (852)
T ss_dssp TTHHHHHHHHHSC-SSHHHHHHHHHHHHHHHHHHTTHHHHCSSSSCHHHHHHHHTTTTTCSSHHHHHHHHHHHHTTTTTT
T ss_pred HHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHhHHHhchhhhcchHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcc
Confidence 4577778776654 4678888888888877633 22110 000 0246888999999999999999999999887432
Q ss_pred hhhHHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCCc-ccccccchHHHHHHHHhhhhcccchhHHHhHHHHHHhh
Q 030369 95 ANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSMS-TKEEILKPEVVDVIRRYAAAESVNVSFSNLAKAFLDKH 173 (178)
Q Consensus 95 ~nk~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~~-sr~~I~~p~ll~ll~~~~~~~~~~~~~~nla~~fL~~~ 173 (178)
.....-.-.+-++.+.++++++++++...|+.+|..++... ..-.-..+.++..+.....+. ...++..|.-|+...
T Consensus 206 ~~~~~~~~~~~l~~l~~~~~d~~~~vr~~a~~~L~~l~~~~~~~~~~~l~~l~~~l~~~~~~~--~~~vr~~a~e~l~~l 283 (852)
T 4fdd_A 206 TQALMLHIDSFIENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQ--DENVALEACEFWLTL 283 (852)
T ss_dssp CHHHHTSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCHHHHGGGHHHHHHHHHHHHTCS--SHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHccCC--cHHHHHHHHHHHHHH
Confidence 21111000123677788889999999999999999888431 111112345666665554433 467888888888766
Q ss_pred cc
Q 030369 174 VT 175 (178)
Q Consensus 174 ~~ 175 (178)
+.
T Consensus 284 ~~ 285 (852)
T 4fdd_A 284 AE 285 (852)
T ss_dssp TT
T ss_pred hc
Confidence 54
No 56
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=95.87 E-value=0.059 Score=50.09 Aligned_cols=141 Identities=10% Similarity=0.108 Sum_probs=88.7
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhc-cC-cccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhH
Q 030369 21 QYLQELVSQFQNSTDEERKEKIVANLANFA-YD-PYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAA 98 (178)
Q Consensus 21 ~ylq~LV~efq~t~~~e~keqvlanLaNfA-yD-P~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~ 98 (178)
++++..+=+.-..++...|.++..-++..| +| |..|+ +.++.++..++++++..++-|..+|..+|-+.....
T Consensus 89 ~~ik~~ll~~l~~~~~~vr~~~a~~i~~ia~~~~~~~wp-----~ll~~L~~~l~~~~~~~r~~al~~L~~i~~~~~~~~ 163 (852)
T 4fdd_A 89 DFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWP-----DLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEIL 163 (852)
T ss_dssp HHHHHHHHTTTTCSSHHHHHHHHHHHHHHHHHTTTTTCT-----THHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCccccH-----HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhHHHh
Confidence 444443333333455677777777777776 44 44443 468889999999999999999999988886532210
Q ss_pred ---Hhh--hcCChhHHHHhhcCCchhHHHHHHHHHHHhcCCcccc-cccchHHHHHHHHhhhhcccchhHHHhHHH
Q 030369 99 ---IIT--KSGGIPLIIECLSSPVRNTVNHALGALYYLCSMSTKE-EILKPEVVDVIRRYAAAESVNVSFSNLAKA 168 (178)
Q Consensus 99 ---~I~--~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~~sr~-~I~~p~ll~ll~~~~~~~~~~~~~~nla~~ 168 (178)
++. -.+-+|.++++++++++++...|+.++..++...+.. .-..+.+++.+......+ +..++.-|.-
T Consensus 164 ~~~~~~~~~~~il~~l~~~l~~~~~~vR~~A~~aL~~~~~~~~~~~~~~~~~~l~~l~~~~~d~--~~~vr~~a~~ 237 (852)
T 4fdd_A 164 DSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDE--EPEVRKNVCR 237 (852)
T ss_dssp HHCSSSSCHHHHHHHHTTTTTCSSHHHHHHHHHHHHTTTTTTCHHHHTSHHHHHHHHHHHHTCC--CHHHHHHHHH
T ss_pred chhhhcchHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcCCC--CHHHHHHHHH
Confidence 100 0123677888899999999999999999877542211 112356666665544433 4555554443
No 57
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=95.70 E-value=0.18 Score=43.48 Aligned_cols=136 Identities=15% Similarity=0.095 Sum_probs=89.9
Q ss_pred hhcCChHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHhhhcCChhHH
Q 030369 30 FQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLI 109 (178)
Q Consensus 30 fq~t~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I~~~gGi~~l 109 (178)
+-..++.+.|+.++..|+.++..-.+..++ -.+++.+++.+..++..+..-|+.++..++.--... .+...-+|.+
T Consensus 449 ~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~--~~llp~l~~~~~~~~~~~R~~a~~~l~~l~~~~~~~--~~~~~~~~~l 524 (588)
T 1b3u_A 449 WLVDHVYAIREAATSNLKKLVEKFGKEWAH--ATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQD--ITTKHMLPTV 524 (588)
T ss_dssp GGGCSSHHHHHHHHHHHHHHHHHHCHHHHH--HHTHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHH--HHHHHTHHHH
T ss_pred HhcCCcHHHHHHHHHHHHHHHHHhCchhHH--HHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHhcCHH--HHHHHHHHHH
Confidence 334456788999999999887321111121 257788888888788888888888888775321111 1222357899
Q ss_pred HHhhcCCchhHHHHHHHHHHHhcCCcccccccchHHHHHHHHhhhhcccchhHHHhHHHHHHh
Q 030369 110 IECLSSPVRNTVNHALGALYYLCSMSTKEEILKPEVVDVIRRYAAAESVNVSFSNLAKAFLDK 172 (178)
Q Consensus 110 i~lLsS~~~evv~~AlttL~~L~~~~sr~~I~~p~ll~ll~~~~~~~~~~~~~~nla~~fL~~ 172 (178)
.+++++++++|...++.+|-.++..- ..+...+.++..|.+... +.++.++..|.-=|..
T Consensus 525 ~~~l~d~~~~Vr~~a~~~l~~l~~~~-~~~~~~~~~~p~l~~l~~--d~d~~vr~~a~~al~~ 584 (588)
T 1b3u_A 525 LRMAGDPVANVRFNVAKSLQKIGPIL-DNSTLQSEVKPILEKLTQ--DQDVDVKYFAQEALTV 584 (588)
T ss_dssp HHGGGCSCHHHHHHHHHHHHHHGGGS-CHHHHHHHHHHHHHHHTT--CSSHHHHHHHHHHHHH
T ss_pred HhhCCCCCchHHHHHHHHHHHHHHHh-chhhhHHHHHHHHHHHcC--CCchhHHHHHHHHHHH
Confidence 99999999999999999998887431 122333666777766544 4467788777655543
No 58
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=95.69 E-value=0.053 Score=39.15 Aligned_cols=117 Identities=11% Similarity=0.081 Sum_probs=78.2
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHh
Q 030369 21 QYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAII 100 (178)
Q Consensus 21 ~ylq~LV~efq~t~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I 100 (178)
+++..|+.-.++ ++.+.|..++..|+++.. + .++.++..|..+++.++..|+-+|.++..
T Consensus 12 ~~~~~l~~~L~~-~~~~vR~~A~~~L~~~~~-~----------~~~~L~~~L~d~~~~vR~~A~~aL~~~~~-------- 71 (131)
T 1te4_A 12 SGLVPRGSHMAD-ENKWVRRDVSTALSRMGD-E----------AFEPLLESLSNEDWRIRGAAAWIIGNFQD-------- 71 (131)
T ss_dssp ---------CCS-SCCCSSSSCCSSTTSCSS-T----------THHHHHHGGGCSCHHHHHHHHHHHGGGCS--------
T ss_pred ccHHHHHHHhcC-CCHHHHHHHHHHHHHhCc-h----------HHHHHHHHHcCCCHHHHHHHHHHHHhcCC--------
Confidence 345556655543 466677777777777642 2 25889999999999999999999999862
Q ss_pred hhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCCcccccccchHHHHHHHHhhhhcccchhHHHhHHHHH
Q 030369 101 TKSGGIPLIIECLSSPVRNTVNHALGALYYLCSMSTKEEILKPEVVDVIRRYAAAESVNVSFSNLAKAFL 170 (178)
Q Consensus 101 ~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~~sr~~I~~p~ll~ll~~~~~~~~~~~~~~nla~~fL 170 (178)
.+.++.|+.+|.++++.|...|+.+|-.+.++. ..|.+++++ ..+ ++.++..|..-|
T Consensus 72 --~~a~~~L~~~L~d~~~~VR~~A~~aL~~~~~~~-----a~~~L~~~l----~d~--~~~vr~~A~~aL 128 (131)
T 1te4_A 72 --ERAVEPLIKLLEDDSGFVRSGAARSLEQIGGER-----VRAAMEKLA----ETG--TGFARKVAVNYL 128 (131)
T ss_dssp --HHHHHHHHHHHHHCCTHHHHHHHHHHHHHCSHH-----HHHHHHHHT----TSC--CTHHHHHHHHHG
T ss_pred --HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCcHH-----HHHHHHHHH----hCC--CHHHHHHHHHHH
Confidence 134899999999999999999999999886431 135555554 222 456766665444
No 59
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=95.30 E-value=0.27 Score=44.81 Aligned_cols=73 Identities=7% Similarity=0.091 Sum_probs=57.1
Q ss_pred cChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCCccccc
Q 030369 63 NVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSMSTKEE 139 (178)
Q Consensus 63 ~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~~sr~~ 139 (178)
.+++.+...|.++++.+...|+.+|+.++.- ...++. ...+.++.||+++++.+...|+++|+.++++.+-..
T Consensus 313 ~a~~~L~~~L~~~d~~vr~~aL~~L~~i~~~---~p~~~~-~~~~~i~~~l~d~d~~Ir~~alelL~~l~~~~nv~~ 385 (618)
T 1w63_A 313 LAINILGRFLLNNDKNIRYVALTSLLKTVQT---DHNAVQ-RHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRG 385 (618)
T ss_dssp HHHHHHHHHHTCSSTTTHHHHHHHHHHHHHH---HHHHHG-GGHHHHHHGGGSSCHHHHHHHHHHHHHHCCSSSTHH
T ss_pred HHHHHHHHHHhCCCCchHHHHHHHHHHHHhh---CHHHHH-HHHHHHHHHccCCChhHHHHHHHHHHHHcccccHHH
Confidence 4677777888888889999999999888632 222232 357899999999999999999999999998765433
No 60
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=95.10 E-value=0.11 Score=44.89 Aligned_cols=69 Identities=10% Similarity=0.031 Sum_probs=48.3
Q ss_pred cChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcC
Q 030369 63 NVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCS 133 (178)
Q Consensus 63 ~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~ 133 (178)
.+++.+...+..+++.+.+.|+.+|..++......... ..-+|.+..+++++++++...|+.+|-.+..
T Consensus 164 ~l~~~l~~l~~d~~~~VR~~a~~~l~~l~~~~~~~~~~--~~l~~~l~~~~~d~~~~vr~~a~~~l~~l~~ 232 (588)
T 1b3u_A 164 ELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVK--SEIIPMFSNLASDEQDSVRLLAVEACVNIAQ 232 (588)
T ss_dssp HHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTSCHHHHH--HTHHHHHHHHHTCSCHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcHHhHH--HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Confidence 35677777777788888888888888886443222221 2336788888888888888888888776653
No 61
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=94.39 E-value=0.56 Score=38.09 Aligned_cols=142 Identities=9% Similarity=0.074 Sum_probs=89.9
Q ss_pred HHHHHHHHHHhhcCChHHHHHHHHHHhhhhc---c-CcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcC--C
Q 030369 20 LQYLQELVSQFQNSTDEERKEKIVANLANFA---Y-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV--D 93 (178)
Q Consensus 20 ~~ylq~LV~efq~t~~~e~keqvlanLaNfA---y-DP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~--D 93 (178)
.+.++.|..-...-++.-.++..+-.|.-+| - +....+|... +++..++.+.+....+++.|..+|-+++. +
T Consensus 59 ~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~~~f~~~y~~~--llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~ 136 (249)
T 2qk1_A 59 SNLLGIYGHIIQKDANIQAVALAAQSVELICDKLKTPGFSKDYVSL--VFTPLLDRTKEKKPSVIEAIRKALLTICKYYD 136 (249)
T ss_dssp HHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCTTTSCHHHHHH--HHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhcccccccHHHHHH--HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcc
Confidence 4667777776633335555565555555555 3 3333345554 69999999999999999998888877753 4
Q ss_pred chhhHH--hhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCCccc--c-------cccchHHHHHHHHhhhhcccchhH
Q 030369 94 PANAAI--ITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSMSTK--E-------EILKPEVVDVIRRYAAAESVNVSF 162 (178)
Q Consensus 94 ~~nk~~--I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~~sr--~-------~I~~p~ll~ll~~~~~~~~~~~~~ 162 (178)
|.. .+ +- .-++.|...|.++++.+...++.+|..++..... . .-..|.+.++| . +.++.+
T Consensus 137 ~~~-~~~~l~--~ll~~l~~~l~~k~~~vk~~al~~l~~~~~~~~~~~~~l~~~l~~~iip~l~~~l----~--D~~~~V 207 (249)
T 2qk1_A 137 PLA-SSGRNE--DMLKDILEHMKHKTPQIRMECTQLFNASMKEEKDGYSTLQRYLKDEVVPIVIQIV----N--DTQPAI 207 (249)
T ss_dssp TTC-TTCTTH--HHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCCSCSHHHHHHHTTTHHHHHHHHH----T--CSSHHH
T ss_pred ccc-cCCcHH--HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHh----c--CCCHHH
Confidence 411 11 11 1256778888888999999999999888744211 1 12245555555 3 335678
Q ss_pred HHhHHHHHHh
Q 030369 163 SNLAKAFLDK 172 (178)
Q Consensus 163 ~nla~~fL~~ 172 (178)
++.|.--|..
T Consensus 208 R~aA~~~l~~ 217 (249)
T 2qk1_A 208 RTIGFESFAI 217 (249)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777665554
No 62
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=94.34 E-value=0.36 Score=39.27 Aligned_cols=133 Identities=10% Similarity=0.135 Sum_probs=84.9
Q ss_pred CChHHHHHHHHHHhhh-hc-cCc------ccHHHhhhccChHHHHhhh-cCCcHHHHHHHHHHHHhhcCC---chhh-HH
Q 030369 33 STDEERKEKIVANLAN-FA-YDP------YNYTFLRQLNVLELFLDCI-TEPNEKLVEFGVGGICNASVD---PANA-AI 99 (178)
Q Consensus 33 t~~~e~keqvlanLaN-fA-yDP------~N~~~LrqL~vidlfld~L-~~~n~~l~EfAiggLcNL~~D---~~nk-~~ 99 (178)
+++-..|.+++.+|+. +. --| .+|. ++++.+...| ...|..+++-|+-+|..++.. +... .+
T Consensus 27 s~~w~eRk~al~~L~~~~~~~~~~i~~~~~~~~-----~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~~~f~~~y 101 (249)
T 2qk1_A 27 SSKWKDRVEALEEFWDSVLSQTKKLKSTSQNYS-----NLLGIYGHIIQKDANIQAVALAAQSVELICDKLKTPGFSKDY 101 (249)
T ss_dssp CSSHHHHHHHHHHHHHHTGGGCCCBCCTTCCCH-----HHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCTTTSCHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCccccCcccHH-----HHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhcccccccHHH
Confidence 4455555567777888 75 212 2222 4578888889 577988888888888777632 2233 44
Q ss_pred hhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCCccccccc--chHHHHHHHHhhhhcccchhHHHhHHHHHHhhc
Q 030369 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSMSTKEEIL--KPEVVDVIRRYAAAESVNVSFSNLAKAFLDKHV 174 (178)
Q Consensus 100 I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~~sr~~I~--~p~ll~ll~~~~~~~~~~~~~~nla~~fL~~~~ 174 (178)
... =+|.|+..+.+..+.|+..+..++-.++...+..... .+.+++.|...=.+. |++++--|-.||.+.+
T Consensus 102 ~~~--llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~~~~~~~l~~ll~~l~~~l~~k--~~~vk~~al~~l~~~~ 174 (249)
T 2qk1_A 102 VSL--VFTPLLDRTKEKKPSVIEAIRKALLTICKYYDPLASSGRNEDMLKDILEHMKHK--TPQIRMECTQLFNASM 174 (249)
T ss_dssp HHH--HHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCTTCTTCTTHHHHHHHHHHTTCS--SHHHHHHHHHHHHHHH
T ss_pred HHH--HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccccccCCcHHHHHHHHHHHHcCC--ChHHHHHHHHHHHHHH
Confidence 432 2789999998888888777777776666322112222 456666665544433 6788888888877765
No 63
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=94.02 E-value=0.72 Score=36.16 Aligned_cols=136 Identities=13% Similarity=0.121 Sum_probs=87.8
Q ss_pred HHHHhhcCChHHHHHHHHHHhhhhccC-cc-cHHHhhhccChHHHHhhhc-CCcHHHHHHHHHHHHhhcCC--chhhHHh
Q 030369 26 LVSQFQNSTDEERKEKIVANLANFAYD-PY-NYTFLRQLNVLELFLDCIT-EPNEKLVEFGVGGICNASVD--PANAAII 100 (178)
Q Consensus 26 LV~efq~t~~~e~keqvlanLaNfAyD-P~-N~~~LrqL~vidlfld~L~-~~n~~l~EfAiggLcNL~~D--~~nk~~I 100 (178)
+....+ +++-..|..++..|....-. |. --..+ -++++.+...|. ..|..+++-|..+|..++.. +....++
T Consensus 20 l~~~l~-s~~w~~R~~a~~~L~~l~~~~~~~~~~~~--~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l~~~~~~~~ 96 (242)
T 2qk2_A 20 FYDKLE-EKKWTLRKESLEVLEKLLTDHPKLENGEY--GALVSALKKVITKDSNVVLVAMAGKCLALLAKGLAKRFSNYA 96 (242)
T ss_dssp HHHHHT-CSSHHHHHHHHHHHHHHHHHCSSBCCCCC--HHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHGGGGHHHH
T ss_pred HHhhhc-cCCHHHHHHHHHHHHHHHccCCCCCCCCH--HHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 444444 44555666667777776633 22 11112 256888899995 88999988888888877733 3334444
Q ss_pred hhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCCcccccccchHHHHHHHHhhhhcccchhHHHhHHHHHHhh
Q 030369 101 TKSGGIPLIIECLSSPVRNTVNHALGALYYLCSMSTKEEILKPEVVDVIRRYAAAESVNVSFSNLAKAFLDKH 173 (178)
Q Consensus 101 ~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~~sr~~I~~p~ll~ll~~~~~~~~~~~~~~nla~~fL~~~ 173 (178)
.. =+|.|+.++.++++.|...|..+|..++...+ .+.+++.+...-.+. |++++--+.-||.+.
T Consensus 97 ~~--ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~~-----~~~ll~~l~~~l~~~--~~~vr~~~l~~l~~~ 160 (242)
T 2qk2_A 97 SA--CVPSLLEKFKEKKPNVVTALREAIDAIYASTS-----LEAQQESIVESLSNK--NPSVKSETALFIARA 160 (242)
T ss_dssp HH--HHHHHHHGGGCCCHHHHHHHHHHHHHHHTTSC-----HHHHHHHHHHHTTCS--CHHHHHHHHHHHHHH
T ss_pred HH--HHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCC-----HHHHHHHHHHHHcCC--ChHHHHHHHHHHHHH
Confidence 32 27899999999999999999999998875422 234555554443433 677777777777664
No 64
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=93.74 E-value=0.5 Score=43.45 Aligned_cols=108 Identities=13% Similarity=0.124 Sum_probs=79.4
Q ss_pred CCCChHHHHHHHHH----------------HhhcCChHHHHHHHHHHhhhhc-cCcccHHHhhhccChHHHHhhhcCCcH
Q 030369 15 SGTPRLQYLQELVS----------------QFQNSTDEERKEKIVANLANFA-YDPYNYTFLRQLNVLELFLDCITEPNE 77 (178)
Q Consensus 15 ~g~~R~~ylq~LV~----------------efq~t~~~e~keqvlanLaNfA-yDP~N~~~LrqL~vidlfld~L~~~n~ 77 (178)
++-.|.+|++.|+- +.=.|++.+.|.=+--.+.+++ .|| +.+ +=++..|.--|..+|+
T Consensus 51 ~~~~k~~~l~Kli~l~~~G~d~s~~~~~vvkl~~s~~~~~Krl~YL~l~~~~~~~~---e~~--~L~iN~l~kDl~~~n~ 125 (621)
T 2vgl_A 51 DGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNS---ELI--RLINNAIKNDLASRNP 125 (621)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCCCSCHHHHHHGGGCSCHHHHHHHHHHHHHSCCCCH---HHH--HHHHHHHHHHHHSCCH
T ss_pred CHHHHHHHHHHHHHHHHcCCCCchhHHHHHHHhcCCCHHHHHHHHHHHHHHccCCc---HHH--HHHHHHHHHhcCCCCH
Confidence 34457777777653 2334567777877777788877 334 222 3456777777788899
Q ss_pred HHHHHHHHHHHhhcCCchhhHHhhhcCChhHHHHhh--cCCchhHHHHHHHHHHHhcC
Q 030369 78 KLVEFGVGGICNASVDPANAAIITKSGGIPLIIECL--SSPVRNTVNHALGALYYLCS 133 (178)
Q Consensus 78 ~l~EfAiggLcNL~~D~~nk~~I~~~gGi~~li~lL--sS~~~evv~~AlttL~~L~~ 133 (178)
.++-.|+-+||++. +|...+.+ ++.|.+|| +++++-|-+.|+.+++.+..
T Consensus 126 ~ir~lALr~L~~i~-~~e~~~~l-----~~~v~~~l~~~d~~~~VRK~A~~al~kl~~ 177 (621)
T 2vgl_A 126 TFMGLALHCIANVG-SREMAEAF-----AGEIPKILVAGDTMDSVKQSAALCLLRLYR 177 (621)
T ss_dssp HHHHHHHHHHHHHC-CHHHHHHH-----TTHHHHHHHCSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccC-CHHHHHHH-----HHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999995 45555555 68999999 88899999999999987773
No 65
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=93.63 E-value=0.26 Score=41.04 Aligned_cols=149 Identities=12% Similarity=0.163 Sum_probs=89.9
Q ss_pred HHHHHHHHHHhhcCChHHHHHHHHHHhhhhccC-c-ccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCch--
Q 030369 20 LQYLQELVSQFQNSTDEERKEKIVANLANFAYD-P-YNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPA-- 95 (178)
Q Consensus 20 ~~ylq~LV~efq~t~~~e~keqvlanLaNfAyD-P-~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~-- 95 (178)
.+|+-..+.+.-.+++.+.|+.++..|..++.. | .=.+++.+ ++++.++.++...++.+...|+..+.++|-...
T Consensus 215 ~~~l~~~l~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~v~~~a~~~l~~~~~~~~~~ 293 (462)
T 1ibr_B 215 RHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGP-ALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDL 293 (462)
T ss_dssp HHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTTTT-THHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 356333444455567889999999999998822 2 11234443 778899999998888899888888888764321
Q ss_pred -----------------hhHHhh--hcCChhHHHHhhcCC-------chhHHHHHHHHHHHhcCCcccccccchHHHHHH
Q 030369 96 -----------------NAAIIT--KSGGIPLIIECLSSP-------VRNTVNHALGALYYLCSMSTKEEILKPEVVDVI 149 (178)
Q Consensus 96 -----------------nk~~I~--~~gGi~~li~lLsS~-------~~evv~~AlttL~~L~~~~sr~~I~~p~ll~ll 149 (178)
...++. -..-+|.+.++|... +..+-..|..+|-.|+..-. +-..|.++..+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~l~~~l~~~d~d~~~~~~~~r~~a~~~L~~l~~~~~--~~~~~~~~~~l 371 (462)
T 1ibr_B 294 AIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCE--DDIVPHVLPFI 371 (462)
T ss_dssp HHHHCCTTCSSSCSSCCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTT--TTHHHHHHHHH
T ss_pred HHhcccccccCCCccchhHHHHHHHhhhccHHHHHHHHhcccccccccchHHHHHHHHHHHHHHhcc--HHHHHHHHHHH
Confidence 111110 012346666777543 23455667777777664311 23347777777
Q ss_pred HHhhhhcccchhHHHhHHHHHHhh
Q 030369 150 RRYAAAESVNVSFSNLAKAFLDKH 173 (178)
Q Consensus 150 ~~~~~~~~~~~~~~nla~~fL~~~ 173 (178)
...-.+. +.+++.-|-..|-..
T Consensus 372 ~~~l~~~--~~~~r~aal~~l~~l 393 (462)
T 1ibr_B 372 KEHIKNP--DWRYRDAAVMAFGCI 393 (462)
T ss_dssp HHHTTCS--SHHHHHHHHHHHHHT
T ss_pred HHHhcCC--ChHHHHHHHHHHHHH
Confidence 6655433 567776666555443
No 66
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=93.49 E-value=0.86 Score=41.30 Aligned_cols=137 Identities=14% Similarity=0.127 Sum_probs=81.9
Q ss_pred HHHHHhhcCChHHHHHHHHHHhhhhc-cC-cc-cHHHhhhccChHHHHhhhcCC-cHHHHHHHHHHHHhhcCC--chh--
Q 030369 25 ELVSQFQNSTDEERKEKIVANLANFA-YD-PY-NYTFLRQLNVLELFLDCITEP-NEKLVEFGVGGICNASVD--PAN-- 96 (178)
Q Consensus 25 ~LV~efq~t~~~e~keqvlanLaNfA-yD-P~-N~~~LrqL~vidlfld~L~~~-n~~l~EfAiggLcNL~~D--~~n-- 96 (178)
.|+.-.. +++...|.++...|+..+ +| |. .|+. +++.+++.+..+ ++..++.|+-.+..+|-+ +..
T Consensus 99 ~ll~~l~-~~~~~vr~~~~~~l~~i~~~~~p~~~w~~-----ll~~L~~~l~~~~~~~~r~~al~~l~~l~~~~~~~~~~ 172 (861)
T 2bpt_A 99 NALTALV-SIEPRIANAAAQLIAAIADIELPHGAWPE-----LMKIMVDNTGAEQPENVKRASLLALGYMCESADPQSQA 172 (861)
T ss_dssp HHHHHHT-CSSHHHHHHHHHHHHHHHHHHGGGTCCHH-----HHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTSSTTSST
T ss_pred HHHHHHC-CCchHHHHHHHHHHHHHHHhhCcccccHH-----HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCChhhhH
Confidence 4444443 344566777766666665 44 53 6654 578899999988 899999999988888754 221
Q ss_pred -hHHhhhcCChhHHHHhhcCC--chhHHHHHHHHHHHhcCC-c-c-cccccchHHHHHHHHhhhhcccchhHHHhHHHHH
Q 030369 97 -AAIITKSGGIPLIIECLSSP--VRNTVNHALGALYYLCSM-S-T-KEEILKPEVVDVIRRYAAAESVNVSFSNLAKAFL 170 (178)
Q Consensus 97 -k~~I~~~gGi~~li~lLsS~--~~evv~~AlttL~~L~~~-~-s-r~~I~~p~ll~ll~~~~~~~~~~~~~~nla~~fL 170 (178)
..++- .=++.+.+++.++ ++++...|+.++..++.- . . ......+.+++.+.....+. +.+++..|.--|
T Consensus 173 ~~~~~~--~ll~~l~~~l~~~~~~~~vr~~al~~l~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~--~~~~r~~a~~~l 248 (861)
T 2bpt_A 173 LVSSSN--NILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEATQAE--DIEVQAAAFGCL 248 (861)
T ss_dssp TGGGHH--HHHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHHTCS--CHHHHHHHHHHH
T ss_pred HHHHHH--HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHccChhHHHHHHHHHHHHhcCC--CHHHHHHHHHHH
Confidence 11111 1145667778776 789999999999876532 1 0 00001234555555544433 456665554443
Q ss_pred H
Q 030369 171 D 171 (178)
Q Consensus 171 ~ 171 (178)
.
T Consensus 249 ~ 249 (861)
T 2bpt_A 249 C 249 (861)
T ss_dssp H
T ss_pred H
Confidence 3
No 67
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=93.41 E-value=0.33 Score=46.94 Aligned_cols=104 Identities=10% Similarity=0.091 Sum_probs=69.1
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhccCc-ccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCC--chhhHH
Q 030369 23 LQELVSQFQNSTDEERKEKIVANLANFAYDP-YNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD--PANAAI 99 (178)
Q Consensus 23 lq~LV~efq~t~~~e~keqvlanLaNfAyDP-~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D--~~nk~~ 99 (178)
|..|.+..+. ++.+.|.+++..|.|.--.| .....-..-.+++.+++.|..+++.++..|+-+|++++-- +.....
T Consensus 8 l~~lL~~l~s-~d~~~R~~A~~~L~~~l~~~~~~~~~~~~~~il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~~~~~~~~ 86 (1230)
T 1u6g_C 8 ISNLLEKMTS-SDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQVET 86 (1230)
T ss_dssp HHHHHHHTTC-SSHHHHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred HHHHHHhcCC-CCHhHHHHHHHHHHHHHcccccCCChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 5566666554 58888999999999875332 2211111226788899999988999999999999998632 222333
Q ss_pred hhhcCChhHHHHhhcCCchhHHHHHHHHHHHhc
Q 030369 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYLC 132 (178)
Q Consensus 100 I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~ 132 (178)
| ++.+...|.++++.+...|..+|-.++
T Consensus 87 i-----~~~Ll~~l~d~~~~vR~~a~~~L~~i~ 114 (1230)
T 1u6g_C 87 I-----VDTLCTNMLSDKEQLRDISSIGLKTVI 114 (1230)
T ss_dssp H-----HHHHHHHTTCSSSHHHHHHHHHHHHHH
T ss_pred H-----HHHHHHHhcCCcHHHHHHHHHHHHHHH
Confidence 3 567788888887766555555554443
No 68
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=93.28 E-value=1.2 Score=40.26 Aligned_cols=98 Identities=11% Similarity=0.116 Sum_probs=68.5
Q ss_pred cCChHHHHHHHHHHhhhhccCc--cc-HHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCch----hhHHhhhcC
Q 030369 32 NSTDEERKEKIVANLANFAYDP--YN-YTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPA----NAAIITKSG 104 (178)
Q Consensus 32 ~t~~~e~keqvlanLaNfAyDP--~N-~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~----nk~~I~~~g 104 (178)
.+++...|+.++..|.+.+..+ .. .+++. .+++.++..+..+++.+++-|.-+|..++..-. ...++- .
T Consensus 379 ~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~l~--~il~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~--~ 454 (861)
T 2bpt_A 379 TADNWRNREAAVMAFGSIMDGPDKVQRTYYVH--QALPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDPQQHLP--G 454 (861)
T ss_dssp TCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHH--HHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHGGGSCTTTTHH--H
T ss_pred CCCChhHHHHHHHHHHHHHcCCCHHHHHHHHH--HHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHhhhhcCCHHHHH--H
Confidence 3456788999999999999543 22 23333 578999999998999988877777777663311 111221 2
Q ss_pred ChhHHHHhhcCCchhHHHHHHHHHHHhcCC
Q 030369 105 GIPLIIECLSSPVRNTVNHALGALYYLCSM 134 (178)
Q Consensus 105 Gi~~li~lLsS~~~evv~~AlttL~~L~~~ 134 (178)
-+|.++++|+++ +.+...|..++.+++..
T Consensus 455 ~l~~l~~~l~~~-~~v~~~a~~al~~l~~~ 483 (861)
T 2bpt_A 455 VVQACLIGLQDH-PKVATNCSWTIINLVEQ 483 (861)
T ss_dssp HHHHHHHHHTSC-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccC-hHHHHHHHHHHHHHHHh
Confidence 267888889876 88888888888888743
No 69
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=92.62 E-value=0.8 Score=40.31 Aligned_cols=110 Identities=12% Similarity=0.082 Sum_probs=87.3
Q ss_pred HHHHHHhhcCChHHHHHHHHHHhhh-hccCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHhh-
Q 030369 24 QELVSQFQNSTDEERKEKIVANLAN-FAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIIT- 101 (178)
Q Consensus 24 q~LV~efq~t~~~e~keqvlanLaN-fAyDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I~- 101 (178)
+++++-.+.++ .+.+..++-.|+. |+-|+.=-.-.-+.+-+..++..+.+.+.+.+-|+..++-++-.--.--.-|+
T Consensus 121 ~~iiekL~~~~-~~~lr~aLfsLk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~~~gN~q~Y~L~AL~~LM~~v~Gm~gvvs 199 (339)
T 3dad_A 121 NAILEKLYSSS-GPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLFVDGMLGVVA 199 (339)
T ss_dssp HHHHHHHHHCC-HHHHHHHHHHHHHHHHTCTTHHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSHHHHHHHHH
T ss_pred HHHHHHHhcCC-cHHHHHHHHHHHHHhhcchHHHHHHHHhccHHHHHHHHHhcChHHHHHHHHHHHHHHhccccccchhC
Confidence 35666667554 4557778999999 99898766667777889999999999999999999999999965533332333
Q ss_pred hcCChhHHHHhhcCCchhHHHHHHHHHHHhcCC
Q 030369 102 KSGGIPLIIECLSSPVRNTVNHALGALYYLCSM 134 (178)
Q Consensus 102 ~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~ 134 (178)
....|.+|..+++|.+..|++.|+..|..+|..
T Consensus 200 ~~~fI~~lyslv~s~~~~V~k~AL~LL~v~V~~ 232 (339)
T 3dad_A 200 HSDTIQWLYTLCASLSRLVVKTALKLLLVFVEY 232 (339)
T ss_dssp CHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcCccHHHHHHHHHHHHHHHcc
Confidence 455688999999999999999999999888744
No 70
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=92.28 E-value=0.52 Score=43.36 Aligned_cols=110 Identities=11% Similarity=0.067 Sum_probs=78.4
Q ss_pred CChHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHhhh--cCCcHHHHHHHHHHHHhhc-CCchhhHHhhhcCChhHH
Q 030369 33 STDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCI--TEPNEKLVEFGVGGICNAS-VDPANAAIITKSGGIPLI 109 (178)
Q Consensus 33 t~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld~L--~~~n~~l~EfAiggLcNL~-~D~~nk~~I~~~gGi~~l 109 (178)
++++-.+--++-.|+|+. +|. ... .+++....+| ...++.+...|+.|+.+++ .+|. .+...+-++.+
T Consensus 122 ~~n~~ir~lALr~L~~i~-~~e---~~~--~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~~~p~---~~~~~~~~~~l 192 (621)
T 2vgl_A 122 SRNPTFMGLALHCIANVG-SRE---MAE--AFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPD---LVPMGDWTSRV 192 (621)
T ss_dssp SCCHHHHHHHHHHHHHHC-CHH---HHH--HHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHCGG---GCCCCSCHHHH
T ss_pred CCCHHHHHHHHHHhhccC-CHH---HHH--HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhChh---hcCchhHHHHH
Confidence 346666777788888885 343 222 5678888999 8889999999999999996 3443 33224667899
Q ss_pred HHhhcCCchhHHHHHHHHHHHhcCCcccccc--cchHHHHHHHHh
Q 030369 110 IECLSSPVRNTVNHALGALYYLCSMSTKEEI--LKPEVVDVIRRY 152 (178)
Q Consensus 110 i~lLsS~~~evv~~AlttL~~L~~~~sr~~I--~~p~ll~ll~~~ 152 (178)
.++|+++++.|+.+|+.+++.++... ...+ ..|.+++.|.++
T Consensus 193 ~~lL~d~d~~V~~~a~~~l~~i~~~~-~~~~~~~~~~~~~~L~~l 236 (621)
T 2vgl_A 193 VHLLNDQHLGVVTAATSLITTLAQKN-PEEFKTSVSLAVSRLSRI 236 (621)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHHHHHC-HHHHTTHHHHHHHHHHHH
T ss_pred HHHhCCCCccHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987431 1112 245555555543
No 71
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=91.53 E-value=0.76 Score=41.89 Aligned_cols=65 Identities=11% Similarity=0.015 Sum_probs=37.1
Q ss_pred hHHHHhhhcCCcHHHHHHHHHHHHhhc-CCchhhHHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCC
Q 030369 65 LELFLDCITEPNEKLVEFGVGGICNAS-VDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSM 134 (178)
Q Consensus 65 idlfld~L~~~n~~l~EfAiggLcNL~-~D~~nk~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~ 134 (178)
++.+..+|..+++.+..-|+.|+.+++ .+|.... +-++.+..+|+++++.|+.+|+.+|+.++..
T Consensus 144 ~~~l~~~L~~~~~~VRk~A~~al~~l~~~~p~~v~-----~~~~~l~~lL~D~d~~V~~~Al~~L~~i~~~ 209 (618)
T 1w63_A 144 AGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELME-----MFLPATKNLLNEKNHGVLHTSVVLLTEMCER 209 (618)
T ss_dssp HHHHHHHHHSCCHHHHHHHHHHHHHHHHHCGGGGG-----GGGGGTTTSTTCCCHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHChHHHH-----HHHHHHHHHhCCCCHhHHHHHHHHHHHHHHh
Confidence 444555555555555555555555554 2332221 2355666667776777777777777777644
No 72
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=91.45 E-value=1.5 Score=35.39 Aligned_cols=104 Identities=16% Similarity=0.175 Sum_probs=61.0
Q ss_pred cChHHHHhhhcCCcHHHHHHHHHHHHhhcCC--ch--hhHH--hhhcCChhHHH-HhhcCCchhHHHHHHHHHHHhcCCc
Q 030369 63 NVLELFLDCITEPNEKLVEFGVGGICNASVD--PA--NAAI--ITKSGGIPLII-ECLSSPVRNTVNHALGALYYLCSMS 135 (178)
Q Consensus 63 ~vidlfld~L~~~n~~l~EfAiggLcNL~~D--~~--nk~~--I~~~gGi~~li-~lLsS~~~evv~~AlttL~~L~~~~ 135 (178)
..+++|--.+.+.|..+++-|+-+|+.++.- +. .... ..-..-+|.|+ +||.++.+.++..|+.++.-++...
T Consensus 55 ~~~~~lkk~l~DsN~~v~~~al~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~ 134 (278)
T 4ffb_C 55 RDPTLFAQYITDSNVVAQEQAIVALNSLIDAFASSSLKNAHNITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLD 134 (278)
T ss_dssp SCTHHHHHHTTCSSHHHHHHHHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhc
Confidence 5567787888899999999999998877532 11 1111 11122356555 5788888888888888877665221
Q ss_pred ccccccchHHHHHHHHhhhhcccchhHHHhHHHHHHh
Q 030369 136 TKEEILKPEVVDVIRRYAAAESVNVSFSNLAKAFLDK 172 (178)
Q Consensus 136 sr~~I~~p~ll~ll~~~~~~~~~~~~~~nla~~fL~~ 172 (178)
.....+++.+...-.+ .|++++--+-.||.+
T Consensus 135 ----~~~~~~~e~l~~~l~~--Knpkv~~~~l~~l~~ 165 (278)
T 4ffb_C 135 ----TSITQSVELVIPFFEK--KLPKLIAAAANCVYE 165 (278)
T ss_dssp ----SSSHHHHHHHGGGGGC--SCHHHHHHHHHHHHH
T ss_pred ----CcHHHHHHHHHHHHhc--cCHHHHHHHHHHHHH
Confidence 1123344444433332 255555555555443
No 73
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=91.25 E-value=1.4 Score=42.50 Aligned_cols=137 Identities=9% Similarity=0.103 Sum_probs=87.0
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhc-cCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCC--ch--
Q 030369 21 QYLQELVSQFQNSTDEERKEKIVANLANFA-YDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD--PA-- 95 (178)
Q Consensus 21 ~ylq~LV~efq~t~~~e~keqvlanLaNfA-yDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D--~~-- 95 (178)
+.+..|+.... .++.+.|..++..|.+++ +-|. .++ -.+++.+++.|..+++.+++-|.-+|..++.+ +.
T Consensus 48 ~il~~Ll~~L~-d~~~~vR~~A~~~L~~l~~~~~~--~~~--~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~~~~ 122 (1230)
T 1u6g_C 48 KVVKMILKLLE-DKNGEVQNLAVKCLGPLVSKVKE--YQV--ETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASS 122 (1230)
T ss_dssp HHHHHHHHHTT-CSSHHHHHHHHHHHHHHHTTSCH--HHH--HHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhCCH--HHH--HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCCccc
Confidence 56777777776 467888888888888887 2232 222 24788889999888877777777777766532 22
Q ss_pred ----hhHHhhhcCChhHHHHhhc-CCchhHHHHHHHHHHHhcCCcccccc--cchHHHHHHHHhhhhcccchhHHHhHH
Q 030369 96 ----NAAIITKSGGIPLIIECLS-SPVRNTVNHALGALYYLCSMSTKEEI--LKPEVVDVIRRYAAAESVNVSFSNLAK 167 (178)
Q Consensus 96 ----nk~~I~~~gGi~~li~lLs-S~~~evv~~AlttL~~L~~~~sr~~I--~~p~ll~ll~~~~~~~~~~~~~~nla~ 167 (178)
...+. ..-+|.+.+++. ++++++...|+.++..++.... ..+ ..|.++..+...-.+. ++.++..|.
T Consensus 123 ~~~~~~~~~--~~llp~L~~~l~~~~~~~~~~~al~~l~~~~~~~~-~~l~~~~~~ll~~l~~~L~~~--~~~vR~~a~ 196 (1230)
T 1u6g_C 123 GSALAANVC--KKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQG-GLLVNFHPSILTCLLPQLTSP--RLAVRKRTI 196 (1230)
T ss_dssp -CCTHHHHH--HHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTC-SSCTTTHHHHHHHHGGGGGCS--SHHHHHHHH
T ss_pred ccchHHHHH--HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHcCC--cHHHHHHHH
Confidence 11111 123788899997 6889999999999999884210 111 2356666655444433 345555544
No 74
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=91.13 E-value=1.1 Score=40.56 Aligned_cols=147 Identities=12% Similarity=0.128 Sum_probs=89.6
Q ss_pred HHHHHHHHHhhcCC-hHHHHHHHHHHhhhhc--cCcccHHHhhh--ccChHHHHhhhcCC--cHHHHHHHHHHHHhhcCC
Q 030369 21 QYLQELVSQFQNST-DEERKEKIVANLANFA--YDPYNYTFLRQ--LNVLELFLDCITEP--NEKLVEFGVGGICNASVD 93 (178)
Q Consensus 21 ~ylq~LV~efq~t~-~~e~keqvlanLaNfA--yDP~N~~~Lrq--L~vidlfld~L~~~--n~~l~EfAiggLcNL~~D 93 (178)
+.+..|+.-.+..+ +...|+.++.-|..+. ++|.. +.. -.+++.|+.+|..+ +..+..-|+.++++++.-
T Consensus 128 ~ll~~l~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~~---~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~ 204 (876)
T 1qgr_A 128 ELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQ---LQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEF 204 (876)
T ss_dssp THHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCHHH---HGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcCHhh---HHhHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 44555665554443 7788998888888887 34432 222 25678889999876 688889999999988632
Q ss_pred --chhhHHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCCccccccc---ch-HHHHHHHHhhhhcccchhHHHhHH
Q 030369 94 --PANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSMSTKEEIL---KP-EVVDVIRRYAAAESVNVSFSNLAK 167 (178)
Q Consensus 94 --~~nk~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~~sr~~I~---~p-~ll~ll~~~~~~~~~~~~~~nla~ 167 (178)
+..........-++.+.+++.++++++...++.+|..++... .... .+ .+++.+...-.+. ...++..|-
T Consensus 205 ~~~~~~~~~~~~~il~~l~~~~~~~~~~vr~~a~~~l~~l~~~~--~~~~~~~~~~~l~~~~~~~~~~~--~~~v~~~al 280 (876)
T 1qgr_A 205 TKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLY--YQYMETYMGPALFAITIEAMKSD--IDEVALQGI 280 (876)
T ss_dssp CHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHS--GGGCHHHHTTTHHHHHHHHHTCS--SHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHhcCC--chHHHHHHH
Confidence 111111111112566677778888999889999988877431 1111 12 5666665443322 356666666
Q ss_pred HHHHhhc
Q 030369 168 AFLDKHV 174 (178)
Q Consensus 168 ~fL~~~~ 174 (178)
-|+..++
T Consensus 281 ~~l~~l~ 287 (876)
T 1qgr_A 281 EFWSNVC 287 (876)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5655443
No 75
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=89.01 E-value=2.1 Score=38.77 Aligned_cols=98 Identities=10% Similarity=0.109 Sum_probs=71.6
Q ss_pred cCChHHHHHHHHHHhhhhccCcc--c-HHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchh----hHHhhhcC
Q 030369 32 NSTDEERKEKIVANLANFAYDPY--N-YTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPAN----AAIITKSG 104 (178)
Q Consensus 32 ~t~~~e~keqvlanLaNfAyDP~--N-~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~n----k~~I~~~g 104 (178)
..++...|+.++..|.+++.... . ..++. ++++.++..|..+++.+++-|.-+|.+++..... ..++- .
T Consensus 376 ~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~~~--~~l~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~l~--~ 451 (876)
T 1qgr_A 376 KNPDWRYRDAAVMAFGCILEGPEPSQLKPLVI--QAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLA--P 451 (876)
T ss_dssp TCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHH--HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGGTSSTTTHH--H
T ss_pred cCCChHHHHHHHHHHHHHHcCCCHHHHHHHHH--HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCchhcccHHHHH--H
Confidence 34578889999999999996532 1 23443 4799999999999999999999888888754221 22221 2
Q ss_pred ChhHHHHhhcCCchhHHHHHHHHHHHhcCC
Q 030369 105 GIPLIIECLSSPVRNTVNHALGALYYLCSM 134 (178)
Q Consensus 105 Gi~~li~lLsS~~~evv~~AlttL~~L~~~ 134 (178)
-++.+.++|.++ +.+...|..++..++..
T Consensus 452 ~l~~l~~~l~~~-~~v~~~a~~al~~l~~~ 480 (876)
T 1qgr_A 452 LLQCLIEGLSAE-PRVASNVCWAFSSLAEA 480 (876)
T ss_dssp HHHHHHHHTTSC-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC-HHHHHHHHHHHHHHHHH
Confidence 367778888775 88888999999888743
No 76
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=88.96 E-value=0.84 Score=42.23 Aligned_cols=85 Identities=15% Similarity=0.172 Sum_probs=61.8
Q ss_pred hHHHHHHHHHHhhhhc-cCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHhhhcCChhHHHHhh
Q 030369 35 DEERKEKIVANLANFA-YDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECL 113 (178)
Q Consensus 35 ~~e~keqvlanLaNfA-yDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I~~~gGi~~li~lL 113 (178)
+...|+=+--+..-|- +=|. |. =.+|+..+|+..+++..++-.||-+|..+|-| .+-..| +..|.+||
T Consensus 41 ~~k~K~LaaQ~I~kffk~FP~----l~-~~Ai~a~lDLcEDed~~IR~qaik~Lp~~ck~-~~i~ki-----aDvL~QlL 109 (507)
T 3u0r_A 41 GTKEKRLAAQFIPKFFKHFPE----LA-DSAINAQLDLCEDEDVSIRRQAIKELPQFATG-ENLPRV-----ADILTQLL 109 (507)
T ss_dssp CHHHHHHHHHHHHHHGGGCGG----GH-HHHHHHHHHHHTCSSHHHHHHHHHHGGGGCCT-TCHHHH-----HHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhhChh----hH-HHHHHHHHHHHhcccHHHHHHHHHhhHHHhhh-hhhhhH-----HHHHHHHH
Confidence 4555555555676665 3343 22 26899999999999999999999999999999 554444 56889999
Q ss_pred cCCch---hHHHHHHHHHHH
Q 030369 114 SSPVR---NTVNHALGALYY 130 (178)
Q Consensus 114 sS~~~---evv~~AlttL~~ 130 (178)
.+.++ ++|.+|+..|+-
T Consensus 110 qtdd~~E~~~V~~sL~sllk 129 (507)
T 3u0r_A 110 QTDDSAEFNLVNNALLSIFK 129 (507)
T ss_dssp TCCCHHHHHHHHHHHHHHHH
T ss_pred hccchHHHHHHHHHHHHHHh
Confidence 77653 566777665554
No 77
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=84.71 E-value=1.9 Score=34.70 Aligned_cols=101 Identities=11% Similarity=0.130 Sum_probs=64.4
Q ss_pred cChHHHHhh-hcCCcHHHHHHHHHHHHhhcCCchhhHHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCCccccccc
Q 030369 63 NVLELFLDC-ITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSMSTKEEIL 141 (178)
Q Consensus 63 ~vidlfld~-L~~~n~~l~EfAiggLcNL~~D~~nk~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~~sr~~I~ 141 (178)
.+++.+++- |.+....+++-|..++.-++--......+ ++.|...+.+.+|-++..++..|..++..-....+.
T Consensus 102 ~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~~~~~~-----~e~l~~~l~~Knpkv~~~~l~~l~~~l~~fg~~~~~ 176 (278)
T 4ffb_C 102 TWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDTSITQS-----VELVIPFFEKKLPKLIAAAANCVYELMAAFGLTNVN 176 (278)
T ss_dssp HHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSSSSHHH-----HHHHGGGGGCSCHHHHHHHHHHHHHHHHHHTTTTCC
T ss_pred HHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhcCcHHHH-----HHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 567777774 78888899999988887765222222222 345666778889999999999999887541111121
Q ss_pred ----chHHHHHHHHhhhhcccchhHHHhHHHHH
Q 030369 142 ----KPEVVDVIRRYAAAESVNVSFSNLAKAFL 170 (178)
Q Consensus 142 ----~p~ll~ll~~~~~~~~~~~~~~nla~~fL 170 (178)
.|.+++.+..+-. +.|+.+++-|.-++
T Consensus 177 ~k~~l~~i~~~l~k~l~--d~~~~VR~aA~~l~ 207 (278)
T 4ffb_C 177 VQTFLPELLKHVPQLAG--HGDRNVRSQTMNLI 207 (278)
T ss_dssp HHHHHHHHGGGHHHHHT--CSSHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHh--CCcHHHHHHHHHHH
Confidence 2334444433333 33678888887665
No 78
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=83.42 E-value=8.5 Score=32.82 Aligned_cols=66 Identities=20% Similarity=0.097 Sum_probs=37.2
Q ss_pred ChHHHHhhhcCCcHHHHHHHHHHHHhhc---CCchhhHHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCC
Q 030369 64 VLELFLDCITEPNEKLVEFGVGGICNAS---VDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSM 134 (178)
Q Consensus 64 vidlfld~L~~~n~~l~EfAiggLcNL~---~D~~nk~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~ 134 (178)
|++.+...+.+.|..+..-|+..+-|++ -||..-.-|+ ..|..+|+++|+.++.-|+..+-...+.
T Consensus 151 V~~~l~sLl~Skd~~vK~agl~~L~eia~~S~D~~i~~~I~-----~eI~elL~~eD~~l~e~aLd~Le~ils~ 219 (265)
T 3b2a_A 151 VRTYINELVVSPDLYTKVAGFCLFLNMLNSSADSGHLTLIL-----DEIPSLLQNDNEFIVELALDVLEKALSF 219 (265)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHGGGCSSCCCGGGTT-----TTHHHHHTCSCHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHhhcccCCHHHHHHHH-----HHHHHHHcCCCHHHHHHHHHHHHHHHcC
Confidence 3444555555556666666666655553 3555555553 2344555666666666666666665544
No 79
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=81.21 E-value=23 Score=35.02 Aligned_cols=121 Identities=16% Similarity=0.158 Sum_probs=83.9
Q ss_pred CCCChHHHHHHHHHHhhcCChHHHHHHHHHHhhhhc-cCcccHHHhhhccChHHHHhhhc-CCcHHHHHHHHHHHHhhcC
Q 030369 15 SGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFA-YDPYNYTFLRQLNVLELFLDCIT-EPNEKLVEFGVGGICNASV 92 (178)
Q Consensus 15 ~g~~R~~ylq~LV~efq~t~~~e~keqvlanLaNfA-yDP~N~~~LrqL~vidlfld~L~-~~n~~l~EfAiggLcNL~~ 92 (178)
-|++-..-+|.|..--.+.++.+.|..++..|+.-+ -+| ..++-.++.|. ..|+.+..-|+.+|-.+|+
T Consensus 571 aGTGn~~aIq~LL~~~~~d~~d~VRraAViaLGlI~~g~~---------e~v~rlv~~L~~~~d~~VR~gAalALGli~a 641 (963)
T 4ady_A 571 AGTGNNSAVKRLLHVAVSDSNDDVRRAAVIALGFVLLRDY---------TTVPRIVQLLSKSHNAHVRCGTAFALGIACA 641 (963)
T ss_dssp TTSCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTSSSC---------SSHHHHTTTGGGCSCHHHHHHHHHHHHHHTS
T ss_pred cCCCCHHHHHHHHHHhccCCcHHHHHHHHHHHHhhccCCH---------HHHHHHHHHHHhcCCHHHHHHHHHHHHHhcc
Confidence 377777788888777777778888999999999765 445 33444555554 4577777778888888887
Q ss_pred CchhhHHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCCcccccccchHHHHHHHHh
Q 030369 93 DPANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSMSTKEEILKPEVVDVIRRY 152 (178)
Q Consensus 93 D~~nk~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~~sr~~I~~p~ll~ll~~~ 152 (178)
-..+.+. |+.|..+++.++.+|-.+|+.+|=.+..-+ .+-..|.+-+.++.+
T Consensus 642 Gn~~~~a------id~L~~L~~D~d~~Vrq~Ai~ALG~Ig~gt--nna~~~rva~~l~~L 693 (963)
T 4ady_A 642 GKGLQSA------IDVLDPLTKDPVDFVRQAAMIALSMILIQQ--TEKLNPQVADINKNF 693 (963)
T ss_dssp SSCCHHH------HHHHHHHHTCSSHHHHHHHHHHHHHHSTTC--CTTTCTTHHHHHHHH
T ss_pred CCCcHHH------HHHHHHHccCCCHHHHHHHHHHHHHHhcCC--ccccchHHHHHHHHH
Confidence 6554433 457888889999999999999988777432 222234444444443
No 80
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=80.41 E-value=4.7 Score=35.13 Aligned_cols=63 Identities=17% Similarity=0.079 Sum_probs=41.7
Q ss_pred HHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcC
Q 030369 67 LFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCS 133 (178)
Q Consensus 67 lfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~ 133 (178)
.+-.+|...++-+..-|+.|..+|+.+. .+.+ + +.++.+.++++++++-|+.||++.|+.+..
T Consensus 143 ~lk~~L~d~~pyVRk~A~l~~~kL~~~~--pe~v-~-~~~~~l~~ll~d~n~~V~~~Al~lL~ei~~ 205 (355)
T 3tjz_B 143 YMKQAIVDKVPSVSSSALVSSLHLLKCS--FDVV-K-RWVNEAQEAASSDNIMVQYHALGLLYHVRK 205 (355)
T ss_dssp HHHHHHTCSSHHHHHHHHHHHHHHTTTC--HHHH-H-TTHHHHHHHTTCSSHHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHhccC--HHHH-H-HHHHHHHHHhcCCCccHHHHHHHHHHHHHh
Confidence 3444555556777777777777776442 2222 2 467777888888888888888888888774
No 81
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=78.87 E-value=28 Score=32.90 Aligned_cols=127 Identities=6% Similarity=0.086 Sum_probs=77.2
Q ss_pred HHH-HHHHHHhhcC--ChHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCC----
Q 030369 21 QYL-QELVSQFQNS--TDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD---- 93 (178)
Q Consensus 21 ~yl-q~LV~efq~t--~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D---- 93 (178)
+++ +.++.++++. ...-.|..+.--|.-|+-+ .+..++. .+++.++.+|..++..++..|..+|.++|-.
T Consensus 454 ~~l~~~v~p~l~~~~~~~p~vr~~a~~~lg~~~~~-~~~~~l~--~~l~~l~~~L~d~~~~V~~~A~~Al~~~~~~~~~~ 530 (960)
T 1wa5_C 454 DFFTKEIAPDLTSNNIPHIILRVDAIKYIYTFRNQ-LTKAQLI--ELMPILATFLQTDEYVVYTYAAITIEKILTIRESN 530 (960)
T ss_dssp HHHHHHTHHHHHCSSCSCHHHHHHHHHHHHHTGGG-SCHHHHH--HHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBSCS
T ss_pred HHHHHHhHHHhcCCCCCCceehHHHHHHHHHHHhh-CCHHHHH--HHHHHHHHHhCCCChhHHHHHHHHHHHHHhccccc
Confidence 444 3567788776 2677788888888888754 2233443 4688999999988999999999999998852
Q ss_pred ----ch-hhHHhhhcCChhHHH----HhhcCC--------chhHHHHHHHHHHHhcCCcccc--cccchHHHHHHHHh
Q 030369 94 ----PA-NAAIITKSGGIPLII----ECLSSP--------VRNTVNHALGALYYLCSMSTKE--EILKPEVVDVIRRY 152 (178)
Q Consensus 94 ----~~-nk~~I~~~gGi~~li----~lLsS~--------~~evv~~AlttL~~L~~~~sr~--~I~~p~ll~ll~~~ 152 (178)
+. .+..+. .-++.|+ +++.+. +.+.+..++..+..-..++-.+ ....|.++..+...
T Consensus 531 ~~~~~~~~~~~l~--p~l~~ll~~L~~ll~~~~~~~~~~~~~e~l~~al~~vv~~~~~~~~p~~~~l~~~L~~~l~~~ 606 (960)
T 1wa5_C 531 TSPAFIFHKEDIS--NSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFPQLLAQFIEIVTIM 606 (960)
T ss_dssp SSCCBSSCGGGTT--TTHHHHHHHHHHHHHTTCCCHHHHTSCHHHHHHHHHHHHHHTTTTGGGHHHHHHHHHHHHHHH
T ss_pred ccccccccHHHhh--hhHHHHHHHHHHHHHhccCCCCcccccHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 23 244443 2355444 445543 3355566665555433332111 11235555555554
No 82
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=76.90 E-value=33 Score=29.00 Aligned_cols=144 Identities=15% Similarity=0.074 Sum_probs=86.1
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHhhhhccCcccHHHhhh--ccChHHHHhhhcCCcHHHHHHHHHHHHhhcCC------
Q 030369 22 YLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQ--LNVLELFLDCITEPNEKLVEFGVGGICNASVD------ 93 (178)
Q Consensus 22 ylq~LV~efq~t~~~e~keqvlanLaNfAyDP~N~~~Lrq--L~vidlfld~L~~~n~~l~EfAiggLcNL~~D------ 93 (178)
.+..+..-+......-.+--++--|+|+--.|.-...+-. -.+++.+..++..++..++--++.-+.|+++-
T Consensus 148 l~~~l~~~~~~~~~p~n~ml~lR~l~NlF~~~~g~~~l~~~~~~il~~~~~~~~~~nknl~iA~ATl~~NlAv~~~~~~~ 227 (304)
T 3ebb_A 148 FSSHLINLLNPKGKPANQLLALRTFCNCFVGQAGQKLMMSQRESLMSHAIELKSGSNKNIHIALATLALNYSVCFHKDHN 227 (304)
T ss_dssp HHHHHHHTTCTTSCHHHHHHHHHHHHHGGGSHHHHHHHHHTHHHHHHHHHGGGSSCCHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHhcCCCCChHHHHHHHHHHHHccCCchhHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHhhcCC
Confidence 3333434333333344455666677887777666555443 26888888888778888888888899999763
Q ss_pred chhhHHhhhcCChhHHHHhh-cCCchhHHHHHHHHHHHhcCC-cc-cccccchHHHHHHHHhhhhcccchhHHHhHHHHH
Q 030369 94 PANAAIITKSGGIPLIIECL-SSPVRNTVNHALGALYYLCSM-ST-KEEILKPEVVDVIRRYAAAESVNVSFSNLAKAFL 170 (178)
Q Consensus 94 ~~nk~~I~~~gGi~~li~lL-sS~~~evv~~AlttL~~L~~~-~s-r~~I~~p~ll~ll~~~~~~~~~~~~~~nla~~fL 170 (178)
...+.++ +..+.+.+ ...++|++--++.+|=+|+.. .. +.....-.+-+.+.+++.++. ..|++..|+..|
T Consensus 228 ~~~~~~l-----l~~l~~il~~~~d~EalyR~LvALGtL~~~~~~~~~lak~l~~~~~v~~~~~~~~-~~kv~~~~~~~~ 301 (304)
T 3ebb_A 228 IEGKAQC-----LSLISTILEVVQDLEATFRLLVALGTLISDDSNAVQLAKSLGVDSQIKKYSSVSE-PAKVSECCRFIL 301 (304)
T ss_dssp HHHHHHH-----HHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHGGGGGGCCS-SHHHHHHHHHHH
T ss_pred chHHHHH-----HHHHHHHHhccCCHHHHHHHHHHHHHHHhCChhHHHHHHHcCHHHHHHHHHhCCC-chhHHHHHHHHH
Confidence 2222222 22333444 345789987777666666633 21 221223445556666666533 578998888776
Q ss_pred H
Q 030369 171 D 171 (178)
Q Consensus 171 ~ 171 (178)
+
T Consensus 302 ~ 302 (304)
T 3ebb_A 302 N 302 (304)
T ss_dssp T
T ss_pred H
Confidence 4
No 83
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=75.26 E-value=13 Score=31.61 Aligned_cols=66 Identities=11% Similarity=0.038 Sum_probs=46.9
Q ss_pred hHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCCcc
Q 030369 65 LELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSMST 136 (178)
Q Consensus 65 idlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~~s 136 (178)
++.+.|.+.++++.+.+.|+-++--+.+=...+. -+.+|.++++|+|++++.-|++.|-+....+.
T Consensus 117 ~~aL~dlik~~~~il~~eaae~Lgklkv~~~~~~------V~~~l~sLl~Skd~~vK~agl~~L~eia~~S~ 182 (265)
T 3b2a_A 117 AKTLVSLLESPDDMMRIETIDVLSKLQPLEDSKL------VRTYINELVVSPDLYTKVAGFCLFLNMLNSSA 182 (265)
T ss_dssp HHHHHHHTTSCCHHHHHHHHHHHHHCCBSCCCHH------HHHHHHHHHTCSSHHHHHHHHHHHHHHGGGCS
T ss_pred HHHHHHHhcCCCchHHHHHHHHhCcCCcccchHH------HHHHHHHHHhCCChhHHHHHHHHHHHhhcccC
Confidence 4556666677788888888877776622111111 14578888999999999999999999876543
No 84
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=75.19 E-value=31 Score=29.97 Aligned_cols=114 Identities=15% Similarity=0.150 Sum_probs=75.0
Q ss_pred cCcccHHHhhhccChHHHHhhhc-----------CCcHHHHHHHHHHHHhhcCCchhhHHhhh-cCChhHHHHhhcCCch
Q 030369 51 YDPYNYTFLRQLNVLELFLDCIT-----------EPNEKLVEFGVGGICNASVDPANAAIITK-SGGIPLIIECLSSPVR 118 (178)
Q Consensus 51 yDP~N~~~LrqL~vidlfld~L~-----------~~n~~l~EfAiggLcNL~~D~~nk~~I~~-~gGi~~li~lLsS~~~ 118 (178)
-.|..|..=--.+-+..+++.|. +.+..+....+.||-.+.....-...|++ .++|..|..+|.|+++
T Consensus 97 t~~~sWV~~F~~~Gl~~Ll~iL~~~~~~~~~~~~~~d~~~q~~~l~CLkalmN~~~G~~~vl~~~~~i~~l~~~L~s~~~ 176 (383)
T 3eg5_B 97 SHPVSWVQTFGAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVP 176 (383)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHHHHHTCC-------CHHHHHHHHHHHHHHTSSHHHHHHHHTCSSHHHHHHHTCCTTSH
T ss_pred hCccHHHHHHHHccHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHHHHhcchhhHHHHHcChHHHHHHHHHhCCCch
Confidence 45677632212566777777775 12446667778888888877666666655 5677999999999999
Q ss_pred hHHHHHHHHHHHhcCCccccccc-chHHHHHHHHhhhhcccchhHHHhHH
Q 030369 119 NTVNHALGALYYLCSMSTKEEIL-KPEVVDVIRRYAAAESVNVSFSNLAK 167 (178)
Q Consensus 119 evv~~AlttL~~L~~~~sr~~I~-~p~ll~ll~~~~~~~~~~~~~~nla~ 167 (178)
.|+.-++..|-.+|.-.. ..- -+.|++-|..++..+ ...||..+-.
T Consensus 177 ~~~~~aleLL~~lc~~~~--~~gG~~~VL~Al~~~~~~~-e~~RF~~lv~ 223 (383)
T 3eg5_B 177 NMMIDAAKLLSALCILPQ--PEDMNERVLEAMTERAEMD-EVERFQPLLD 223 (383)
T ss_dssp HHHHHHHHHHHHHHTCCS--STTHHHHHHHHHHHHHHHH-TSCTTHHHHH
T ss_pred HHHHHHHHHHHHHHhCcC--cCCcHHHHHHHHHHHHHhC-CCCcHHHHHH
Confidence 999999999977774321 011 244677777666633 2557766544
No 85
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=73.86 E-value=44 Score=28.94 Aligned_cols=29 Identities=24% Similarity=0.308 Sum_probs=19.8
Q ss_pred CCCChHHHHHHHHHHhhcCChHHHH-HHHHH
Q 030369 15 SGTPRLQYLQELVSQFQNSTDEERK-EKIVA 44 (178)
Q Consensus 15 ~g~~R~~ylq~LV~efq~t~~~e~k-eqvla 44 (178)
.|.++-.=||+ ...|.+++....| .+++.
T Consensus 20 ~~~~k~~v~qe-~r~fn~~~~~~~kc~~~l~ 49 (355)
T 3tjz_B 20 QHLEKSAVLQE-ARVFNETPINPRKCAHILT 49 (355)
T ss_dssp CCCCHHHHHHH-GGGTTSSSCCHHHHHHHHH
T ss_pred ccchHHHHHHH-HHHhcCCCCcHHHHHHHHH
Confidence 36788888999 4799999754443 33343
No 86
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=71.12 E-value=26 Score=28.00 Aligned_cols=111 Identities=15% Similarity=0.155 Sum_probs=68.6
Q ss_pred cccHHHhhhccChHHHHhhhcC-----------CcHHHHHHHHHHHHhhcCCchhhHHhhh-cCChhHHHHhhcCCchhH
Q 030369 53 PYNYTFLRQLNVLELFLDCITE-----------PNEKLVEFGVGGICNASVDPANAAIITK-SGGIPLIIECLSSPVRNT 120 (178)
Q Consensus 53 P~N~~~LrqL~vidlfld~L~~-----------~n~~l~EfAiggLcNL~~D~~nk~~I~~-~gGi~~li~lLsS~~~ev 120 (178)
|..|..=-..+-++.+++.|.. .+...+.-.+.||--++..+.--..|++ .+++..|..+|.++++.+
T Consensus 33 ~~~Wv~~F~~~Gl~~L~~~L~~~~~~~~~~~~~~~~~~~~~~l~CLkalmn~~~G~~~vl~~~~~i~~l~~~L~s~~~~~ 112 (233)
T 2f31_A 33 PVSWVQTFGAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNM 112 (233)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTCC-----CCHHHHHHHHHHHHHHHTSSHHHHHHHHTSSSHHHHHHTTCCTTSHHH
T ss_pred CcHHHHHHHHhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHhCChHHHHHHHcCcHHHHHHHHHhCCCCchH
Confidence 4444322234555555555541 1456666778888888877666666655 557899999999999999
Q ss_pred HHHHHHHHHHhcCCccccccc-chHHHHHHHHhhhhcccchhHHHhH
Q 030369 121 VNHALGALYYLCSMSTKEEIL-KPEVVDVIRRYAAAESVNVSFSNLA 166 (178)
Q Consensus 121 v~~AlttL~~L~~~~sr~~I~-~p~ll~ll~~~~~~~~~~~~~~nla 166 (178)
...++..|..+|.-+.. -- -+.|++-|..++.-+ .-.||..+-
T Consensus 113 r~~~leLL~~lc~~~~~--~G~~~~VL~Al~~~~~~~-e~~RF~~lv 156 (233)
T 2f31_A 113 MIDAAKLLSALCILPQP--EDMNERVLEAMTERAEMD-EVERFQPLL 156 (233)
T ss_dssp HHHHHHHHHHHHTCSSS--SCHHHHHHHHHHHHHHHH-TSCTTHHHH
T ss_pred HHHHHHHHHHHHhCCCC--CChHHHHHHHHHHHHHhC-CcchHHHHH
Confidence 99999888777744210 01 334566666554422 134655443
No 87
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=70.50 E-value=57 Score=30.75 Aligned_cols=110 Identities=14% Similarity=0.106 Sum_probs=62.9
Q ss_pred HHHHHHHHHhhcCC--hHHHHHHHHHHhhhhccC---cc-cHHHhh-hccChHHHHhh----hcCC---cHHHHHHHHHH
Q 030369 21 QYLQELVSQFQNST--DEERKEKIVANLANFAYD---PY-NYTFLR-QLNVLELFLDC----ITEP---NEKLVEFGVGG 86 (178)
Q Consensus 21 ~ylq~LV~efq~t~--~~e~keqvlanLaNfAyD---P~-N~~~Lr-qL~vidlfld~----L~~~---n~~l~EfAigg 86 (178)
+|++...++|...+ +-..||.++-.+.-+|-. +. ....+. ..++.+.|... |..+ ++.++.-|.-.
T Consensus 402 ~~i~~~l~~~~~~~~~~w~~reaal~algaia~~~~~~~~~~~~~~~~~~l~~~l~~~v~p~l~~~~~~~p~vr~~a~~~ 481 (960)
T 1wa5_C 402 AHMKGFVDQYMSDPSKNWKFKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFTKEIAPDLTSNNIPHIILRVDAIKY 481 (960)
T ss_dssp HHHHHHHHHHHC----CHHHHHHHHHHHHHHHBSSCCBTTBCCCBCTTCCHHHHHHHHTHHHHHCSSCSCHHHHHHHHHH
T ss_pred HHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHhccccCCcccccccccHHHHHHHHhHHHhcCCCCCCceehHHHHHH
Confidence 56666667776543 334677777777666521 11 000000 01222322222 3434 77777766666
Q ss_pred HHhhcCCchhhHHhhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcC
Q 030369 87 ICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYYLCS 133 (178)
Q Consensus 87 LcNL~~D~~nk~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~ 133 (178)
|.-.|-+. .+++.. .-++.++++|.++++.|..+|..+|.+++.
T Consensus 482 lg~~~~~~-~~~~l~--~~l~~l~~~L~d~~~~V~~~A~~Al~~~~~ 525 (960)
T 1wa5_C 482 IYTFRNQL-TKAQLI--ELMPILATFLQTDEYVVYTYAAITIEKILT 525 (960)
T ss_dssp HHHTGGGS-CHHHHH--HHHHHHHHHTTCSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHhhC-CHHHHH--HHHHHHHHHhCCCChhHHHHHHHHHHHHHh
Confidence 66665442 233332 236888999988888899999999999885
No 88
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=68.64 E-value=21 Score=31.00 Aligned_cols=114 Identities=16% Similarity=0.205 Sum_probs=71.2
Q ss_pred CcccHHHhhhccChHHHHhhhcC-----------CcHHHHHHHHHHHHhhcCCchhhHHhhh-cCChhHHHHhhcCCchh
Q 030369 52 DPYNYTFLRQLNVLELFLDCITE-----------PNEKLVEFGVGGICNASVDPANAAIITK-SGGIPLIIECLSSPVRN 119 (178)
Q Consensus 52 DP~N~~~LrqL~vidlfld~L~~-----------~n~~l~EfAiggLcNL~~D~~nk~~I~~-~gGi~~li~lLsS~~~e 119 (178)
.|..|..=-..+-++.+++.|.. .+..++.-.+.||--++..+.--..|+. .++|..|..+|.++++.
T Consensus 36 ~~~~Wv~~F~~~Gl~~Ll~~L~~~~~~~~~~~~~~d~~~~~~~l~CLkalmN~~~Gl~~vl~~~~~i~~l~~sL~s~~~~ 115 (386)
T 2bnx_A 36 NPVSWVQTFGAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPN 115 (386)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCTTHHHHHHHHHHHHHHHTSSHHHHHHHHHSSSHHHHHHHTCCTTSHH
T ss_pred CCcHHHHHHHHhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhCCHHHHHHHHcCcHHHHHHHHHhCCCCch
Confidence 35555332234566666666641 1456666778888888877766666655 56789999999999999
Q ss_pred HHHHHHHHHHHhcCCcccccccchHHHHHHHHhhhhcccchhHHHhHH
Q 030369 120 TVNHALGALYYLCSMSTKEEILKPEVVDVIRRYAAAESVNVSFSNLAK 167 (178)
Q Consensus 120 vv~~AlttL~~L~~~~sr~~I~~p~ll~ll~~~~~~~~~~~~~~nla~ 167 (178)
+..-++..|..+|.-....- .-+.|++-|..++..+ .-.||..+-.
T Consensus 116 ~r~~vleLL~alc~~~~~~G-~~~~VL~Al~~~~~~~-e~~RF~~lv~ 161 (386)
T 2bnx_A 116 MMIDAAKLLSALCILPQPED-MNERVLEAMTERAEMD-EVERFQPLLD 161 (386)
T ss_dssp HHHHHHHHHHHHHTCCSSTT-HHHHHHHHHHHHHHHH-TSCTTHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCC-hHHHHHHHHHHHHHhC-chhhHHHHHH
Confidence 99999888876664321000 1345666666665432 1346655443
No 89
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*
Probab=67.78 E-value=21 Score=34.65 Aligned_cols=147 Identities=12% Similarity=0.127 Sum_probs=89.9
Q ss_pred HHHHHHHHHHhhcCChHHHHHHHHHHhhhhcc-CcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhc---CCch
Q 030369 20 LQYLQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNAS---VDPA 95 (178)
Q Consensus 20 ~~ylq~LV~efq~t~~~e~keqvlanLaNfAy-DP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~---~D~~ 95 (178)
.+....++..|..+++.+..++++.-|..|-. =|. .++..-+.++.+..+|.. +.+.+-|+-|||.+. .||.
T Consensus 191 ~~~~~~iL~~~~~~~~~~l~~~~L~~l~s~i~wi~~--~~i~~~~ll~~l~~~L~~--~~~r~~A~ecL~ei~~k~~~~~ 266 (980)
T 3ibv_A 191 VSFVYEMMLAYSNAKNYGTVGLCLQVYAQWVSWINI--NLIVNEPCMNLLYSFLQI--EELRCAACETMTEIVNKKMKPL 266 (980)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCH--HHHHCHHHHHHHHHHTTS--HHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhhcCH--HhhhcchHHHHHHHHcCC--hHHHHHHHHHHHHHHHcCCChh
Confidence 34444556666666677888999999999984 343 455556788888888875 688999999998874 6778
Q ss_pred hhHHhhhcCChhHHHHhhc--CCchhHHHHHHH--------HHHHhcCCcc-------ccc--ccchHHHHHHHHhhhhc
Q 030369 96 NAAIITKSGGIPLIIECLS--SPVRNTVNHALG--------ALYYLCSMST-------KEE--ILKPEVVDVIRRYAAAE 156 (178)
Q Consensus 96 nk~~I~~~gGi~~li~lLs--S~~~evv~~Alt--------tL~~L~~~~s-------r~~--I~~p~ll~ll~~~~~~~ 156 (178)
.|..++..=++..++.-+. ..|.|... .++ .+..+ ...+ +.. -....+++.|.++-.++
T Consensus 267 ~k~~li~~l~L~~~~~~l~~~~~D~d~~~-~la~L~~~~ge~l~~~-~~~~~~~~~~~~~~~~~~l~~ll~~lL~~~~~~ 344 (980)
T 3ibv_A 267 EKLNLLNILNLNLFFSKSQEQSTDPNFDE-HVAKLINAQGVELVAI-KSDPSELSPELKENCSFQLYNLFPYLIRYLSDD 344 (980)
T ss_dssp HHHHHHHHHHHHHHHCC-----CCHHHHH-HHHHHHHHHHHHHHHH-HTSCC--CHHHHHHHHHHHHHTHHHHHHHHTCS
T ss_pred hHHHHHHHHhHHHHHHHHhcccccHHHHH-HHHHHHHHHHHHHHHH-ccCccccchhhhhhHHHHHHHHHHHHHHHhCCC
Confidence 8877765423333333332 45666532 222 22222 1111 000 11246777777777655
Q ss_pred ccchhHHHhHHHHHHhhc
Q 030369 157 SVNVSFSNLAKAFLDKHV 174 (178)
Q Consensus 157 ~~~~~~~nla~~fL~~~~ 174 (178)
+ ..++..+--|+.+|+
T Consensus 345 ~--deVs~~t~~Fw~~~l 360 (980)
T 3ibv_A 345 Y--DETSTAVFPFLSDLL 360 (980)
T ss_dssp S--HHHHHTTHHHHHHHH
T ss_pred c--hhHHHHHHHHHHHHH
Confidence 3 467777777777765
No 90
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
Probab=63.35 E-value=5.5 Score=36.49 Aligned_cols=73 Identities=21% Similarity=0.357 Sum_probs=51.1
Q ss_pred ccHHHhhhccChHHHHhhhcC----------CcHHHHHHHHHHHHhhc-CCchhhHHhhhcCChhHHHHhhcCCchhHHH
Q 030369 54 YNYTFLRQLNVLELFLDCITE----------PNEKLVEFGVGGICNAS-VDPANAAIITKSGGIPLIIECLSSPVRNTVN 122 (178)
Q Consensus 54 ~N~~~LrqL~vidlfld~L~~----------~n~~l~EfAiggLcNL~-~D~~nk~~I~~~gGi~~li~lLsS~~~evv~ 122 (178)
.||..+|+ ++++|.+ .|+..+.-|.-=|..++ .-|.-|..+.+-||=+.+++|++++|++|..
T Consensus 392 ~~~~llk~------L~~iL~~~~~~~~~~~s~d~~~laVAc~Digefvr~~P~gr~i~~~lg~K~~VM~Lm~h~d~~Vr~ 465 (480)
T 1ho8_A 392 DNYKIFRQ------LIELLQAKVRNGDVNAKQEKIIIQVALNDITHVVELLPESIDVLDKTGGKADIMELLNHSDSRVKY 465 (480)
T ss_dssp GGGHHHHH------HHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHSHHHHHHHHTSCSSHHHHH
T ss_pred cchHHHHH------HHHHHhhhccccccccCCCcceEEeecccHHHHHHHCcchhHHHHHcCcHHHHHHHhcCCCHHHHH
Confidence 56666665 4566652 25555544433333333 3488888888888889999999999999999
Q ss_pred HHHHHHHHhc
Q 030369 123 HALGALYYLC 132 (178)
Q Consensus 123 ~AlttL~~L~ 132 (178)
+|+-|+.-++
T Consensus 466 ~AL~avQklm 475 (480)
T 1ho8_A 466 EALKATQAII 475 (480)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999887654
No 91
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=63.01 E-value=9.6 Score=29.48 Aligned_cols=67 Identities=12% Similarity=0.090 Sum_probs=45.6
Q ss_pred hhHHHHhhcCCchhHHHHHHHHHHHhcCC---cccccccchHHHHHHHHhhhhcccchhHHHhHHHHHHhh
Q 030369 106 IPLIIECLSSPVRNTVNHALGALYYLCSM---STKEEILKPEVVDVIRRYAAAESVNVSFSNLAKAFLDKH 173 (178)
Q Consensus 106 i~~li~lLsS~~~evv~~AlttL~~L~~~---~sr~~I~~p~ll~ll~~~~~~~~~~~~~~nla~~fL~~~ 173 (178)
+..|.+-|.++++.+++.|++.|=.|+.- .-..+|-+..+++-|.+.... ..++++++.+..+++.+
T Consensus 54 ~ral~krl~~~n~~vql~AL~LLd~~vkNcG~~Fh~evas~~Fl~el~~l~~~-~~~~~Vk~kil~li~~W 123 (163)
T 1x5b_A 54 LKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCSRDFATEVRAVIKN-KAHPKVCEKLKSLMVEW 123 (163)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHTCHHHHHHHTSHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHcc-CCCHHHHHHHHHHHHHH
Confidence 55677778889999999999988777633 234566667777666555442 23567777777666543
No 92
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=60.38 E-value=22 Score=35.20 Aligned_cols=121 Identities=13% Similarity=0.175 Sum_probs=76.9
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCC----chhhH
Q 030369 23 LQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD----PANAA 98 (178)
Q Consensus 23 lq~LV~efq~t~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D----~~nk~ 98 (178)
|+.|+.....++ .+.+..+..+|+++.-.......+. .++++.+...+..-+.. |-|..++..+|-- +..-.
T Consensus 16 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~k~~~--~~a~~~~~~~~~~~~~~~~~e~ 91 (986)
T 2iw3_A 16 LEELFQKLSVAT-ADNRHEIASEVASFLNGNIIEHDVP-EHFFGELAKGIKDKKTA--ANAMQAVAHIANQSNLSPSVEP 91 (986)
T ss_dssp HHHHHHHHTTCC-TTTHHHHHHHHHHHHTSSCSSSSCC-HHHHHHHHHHHTSHHHH--HHHHHHHHHHTCTTTCCTTTHH
T ss_pred HHHHHhhccccc-hhHHHHHHHHHHHHHhccccccccc-hhHHHHHHHHHhccCCH--HHHHHHHHHHHHhcCCCCCccc
Confidence 344555444444 3344556777888765543333333 47788888888765444 8888888888722 23445
Q ss_pred HhhhcCChhHHHHhhcCCchhHH---HHHHHHHHHhcCCcccccccchHHHHHHH
Q 030369 99 IITKSGGIPLIIECLSSPVRNTV---NHALGALYYLCSMSTKEEILKPEVVDVIR 150 (178)
Q Consensus 99 ~I~~~gGi~~li~lLsS~~~evv---~~AlttL~~L~~~~sr~~I~~p~ll~ll~ 150 (178)
+++ +-+|.+..+..+....|. ..|+.+++..+++.+- ....|.+++.|.
T Consensus 92 ~~~--~~~~~~~~~~~dk~~~v~~aa~~~~~~~~~~~~~~a~-~~~~~~~~~~~~ 143 (986)
T 2iw3_A 92 YIV--QLVPAICTNAGNKDKEIQSVASETLISIVNAVNPVAI-KALLPHLTNAIV 143 (986)
T ss_dssp HHH--TTHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSCGGGH-HHHHHHHHHHHH
T ss_pred chH--HHHHHHHHHhcCCchHHHHHHHHHHHHHHHhCCHHHH-HHHHHHHHHHhc
Confidence 555 357888888877666554 4566777888887544 455789998885
No 93
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=56.99 E-value=95 Score=28.77 Aligned_cols=117 Identities=15% Similarity=0.181 Sum_probs=62.3
Q ss_pred HHHhhcCChHHHHHHHHHHhhhhccC--cccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCC-chhhHHhhhc
Q 030369 27 VSQFQNSTDEERKEKIVANLANFAYD--PYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANAAIITKS 103 (178)
Q Consensus 27 V~efq~t~~~e~keqvlanLaNfAyD--P~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D-~~nk~~I~~~ 103 (178)
+++|.+.++-..+|..+-.+.-.+-- +.-.++|.+ +++.++ .|.++++.+..-++-.|.-.+-. ..+.+++-
T Consensus 454 l~~~~~~~~w~~~eaal~al~~i~~~~~~~~~~~l~~--l~~~l~-~l~~~~~~vr~~~~~~l~~~~~~l~~~~~~l~-- 528 (963)
T 2x19_B 454 LTSSEEPYSWQHTEALLYGFQSIAETIDVNYSDVVPG--LIGLIP-RISISNVQLADTVMFTIGALSEWLADHPVMIN-- 528 (963)
T ss_dssp HHTCCCSCCHHHHHHHHHHHHHHTTSCCSSCCSHHHH--HHHHGG-GSCCCSHHHHHHHHHHHHHTHHHHHHCHHHHT--
T ss_pred HHhcCCCCchHHHHHHHHHHHHHHhhcCchhhHHHHH--HHHHHH-hCCCCcHHHHHHHHHHHHHHHHHHHhCHHHHH--
Confidence 33332334445566666555555521 111123332 344333 33445677766666555555422 11223332
Q ss_pred CChhHHHHhhcCCchhHHHHHHHHHHHhcCCccccccc--chHHHHHHHH
Q 030369 104 GGIPLIIECLSSPVRNTVNHALGALYYLCSMSTKEEIL--KPEVVDVIRR 151 (178)
Q Consensus 104 gGi~~li~lLsS~~~evv~~AlttL~~L~~~~sr~~I~--~p~ll~ll~~ 151 (178)
.-++.|++.|.+ +.|...|..++..++.. .+..+. .|++++.|..
T Consensus 529 ~vl~~l~~~l~~--~~V~~~A~~al~~l~~~-~~~~l~p~~~~il~~l~~ 575 (963)
T 2x19_B 529 SVLPLVLHALGN--PELSVSSVSTLKKICRE-CKYDLPPYAANIVAVSQD 575 (963)
T ss_dssp TTHHHHHHHTTC--GGGHHHHHHHHHHHHHH-TGGGCTTTHHHHHHHHHH
T ss_pred HHHHHHHHHhCC--chHHHHHHHHHHHHHHH-HHHHHHhhHHHHHHHHHH
Confidence 346788888855 78889999999999853 344444 3666655544
No 94
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=47.70 E-value=83 Score=23.33 Aligned_cols=65 Identities=12% Similarity=0.046 Sum_probs=42.2
Q ss_pred hhHHHHhhcCCchhHHHHHHHHHHHhcCC-c--ccccccchHHHHHHHHhhhhcccchhHHHhHHHHHHh
Q 030369 106 IPLIIECLSSPVRNTVNHALGALYYLCSM-S--TKEEILKPEVVDVIRRYAAAESVNVSFSNLAKAFLDK 172 (178)
Q Consensus 106 i~~li~lLsS~~~evv~~AlttL~~L~~~-~--sr~~I~~p~ll~ll~~~~~~~~~~~~~~nla~~fL~~ 172 (178)
+..|.+-|.++++.+++.|++.|=.|+.- . -..+|-+..+++-|.+... ..++++++.+...++.
T Consensus 44 ~rai~Krl~~~n~~~ql~AL~LLe~~vkNcG~~f~~evas~~Fl~el~~l~~--~~~~~Vk~kil~li~~ 111 (140)
T 3ldz_A 44 LRSIMRRVNHKDPHVAMQALTLLGACVSNCGKIFHLEVCSRDFASEVSNVLN--KGHPKVCEKLKALMVE 111 (140)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHSSHHHHHHHHHHHH--HSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHhc--cCCHHHHHHHHHHHHH
Confidence 56777778889999999999888766632 2 2445656666666554433 1245666666655543
No 95
>3gs3_A Symplekin, LD45768P; helix-turn-helix heat repeat extended loop, transcription, protein binding; 2.40A {Drosophila melanogaster}
Probab=46.06 E-value=1.2e+02 Score=24.88 Aligned_cols=62 Identities=13% Similarity=0.027 Sum_probs=40.6
Q ss_pred hHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHhhhcCChhHHHHhhcCCchhHHHHHHHHHHH
Q 030369 65 LELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNHALGALYY 130 (178)
Q Consensus 65 idlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I~~~gGi~~li~lLsS~~~evv~~AlttL~~ 130 (178)
++-++..-..++..+..|.++-|--.|.. +.++. ..-++.|..+|.++++.|++.+|.+.-.
T Consensus 55 l~~il~~~~~~~~~vrk~~~~Fi~e~~~~---k~~l~-~~~l~~L~~Ll~d~d~~V~K~~I~~~~~ 116 (257)
T 3gs3_A 55 LESVLSLAHDSNMEVRKQVVAFVEQVCKV---KVELL-PHVINVVSMLLRDNSAQVIKRVIQACGS 116 (257)
T ss_dssp HHHHHGGGGCSCHHHHHHHHHHHHHHHHH---CGGGH-HHHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred HHHHHHhccCChHHHHHHHHHHHHHHHHH---HHHHH-HHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 33344433446778888888888777722 22222 1236778888888899999999966543
No 96
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=44.34 E-value=77 Score=31.36 Aligned_cols=94 Identities=16% Similarity=0.272 Sum_probs=65.8
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHh
Q 030369 21 QYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAII 100 (178)
Q Consensus 21 ~ylq~LV~efq~t~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I 100 (178)
--|-.|++....+..=-.|.-++.-+..++-+--.....+=-++||.+-++.-.-.+.+..-|..++-.+|.=-.|++.-
T Consensus 133 ~~~~~~~~~~~~~~kw~~k~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~k~~v~~~~~~~~~~~~~~~~n~d~~ 212 (986)
T 2iw3_A 133 ALLPHLTNAIVETNKWQEKIAILAAFSAMVDAAKDQVALRMPELIPVLSETMWDTKKEVKAAATAAMTKATETVDNKDIE 212 (986)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHGGGCCCTTTG
T ss_pred HHHHHHHHHhccccchHHHHHHHHHHHHHHHHhHHHHHHhccchhcchHhhcccCcHHHHHHHHHHHHHHHhcCCCcchh
Confidence 34667777776665556666666666666644223333333489999999999888888888887777776545565544
Q ss_pred hhcCChhHHHHhhcCCc
Q 030369 101 TKSGGIPLIIECLSSPV 117 (178)
Q Consensus 101 ~~~gGi~~li~lLsS~~ 117 (178)
.-||.||+|+..|+
T Consensus 213 ---~~~~~~~~~~~~p~ 226 (986)
T 2iw3_A 213 ---RFIPSLIQCIADPT 226 (986)
T ss_dssp ---GGHHHHHHHHHCTT
T ss_pred ---hhHHHHHHHhcChh
Confidence 34899999999984
No 97
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=42.63 E-value=1e+02 Score=29.47 Aligned_cols=90 Identities=11% Similarity=0.149 Sum_probs=50.1
Q ss_pred cccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCch---------h-----hHHhhhcCChhHH----HHhh-
Q 030369 53 PYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPA---------N-----AAIITKSGGIPLI----IECL- 113 (178)
Q Consensus 53 P~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~---------n-----k~~I~~~gGi~~l----i~lL- 113 (178)
|.+|+ +.++-++..++ .++...+.+.++|.-++-|-. . |..+.+ .++.| .+++
T Consensus 133 p~~Wp-----~ll~~L~~~~~-~~~~~~~~~l~~L~~l~eev~~~~~~~~~~~r~~~lk~~l~~--~~~~i~~~~~~~l~ 204 (1049)
T 3m1i_C 133 PQNWP-----EFIPELIGSSS-SSVNVCENNMIVLKLLSEEVFDFSAEQMTQAKALHLKNSMSK--EFEQIFKLCFQVLE 204 (1049)
T ss_dssp TTTCT-----THHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHTSCTTTSCHHHHHHHHHHHHH--HHHHHHHHHHHHHH
T ss_pred cccch-----HHHHHHHHHHc-cChHHHHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 45554 45677777776 455667777777777663311 0 122322 24444 4555
Q ss_pred cCCchhHHHHHHHHHHHhcCCcccccccchHHHHHHH
Q 030369 114 SSPVRNTVNHALGALYYLCSMSTKEEILKPEVVDVIR 150 (178)
Q Consensus 114 sS~~~evv~~AlttL~~L~~~~sr~~I~~p~ll~ll~ 150 (178)
+++++++...++.++...+.--.-..+..+++++.+-
T Consensus 205 ~~~~~~~~~~aL~~l~~~l~wi~~~~~~~~~ll~~l~ 241 (1049)
T 3m1i_C 205 QGSSSSLIVATLESLLRYLHWIPYRYIYETNILELLS 241 (1049)
T ss_dssp HCCCHHHHHHHHHHHHHHTTTSCTHHHHSSSHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHHHhhCCHHHHhhhhHHHHHH
Confidence 3345788889999987666432222233355666554
No 98
>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans}
Probab=42.02 E-value=1.5e+02 Score=24.61 Aligned_cols=24 Identities=13% Similarity=0.198 Sum_probs=15.0
Q ss_pred ChHHHHhhhcCCcHHHHHHHHHHH
Q 030369 64 VLELFLDCITEPNEKLVEFGVGGI 87 (178)
Q Consensus 64 vidlfld~L~~~n~~l~EfAiggL 87 (178)
+++.+..-+..+|+.+..+|+.|+
T Consensus 140 ~l~~~~~W~~d~n~~VRR~Ase~~ 163 (240)
T 3l9t_A 140 ALPIIDEWLKSSNLHTRRAATEGL 163 (240)
T ss_dssp THHHHHHHHHCSSHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCHHHHHHHHHhh
Confidence 345555555566677777777665
No 99
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=41.81 E-value=2.1e+02 Score=26.42 Aligned_cols=75 Identities=15% Similarity=0.204 Sum_probs=55.5
Q ss_pred HHHHHHHHHHhhcCChHHHHHHHHHHhhhhccCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhc------CC
Q 030369 20 LQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNAS------VD 93 (178)
Q Consensus 20 ~~ylq~LV~efq~t~~~e~keqvlanLaNfAyDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~------~D 93 (178)
.+=|.+++..++.+++.+.|.|+-.-|-+|--.|.-|.++.++ ++ .+.++.++-||+--|-|.. ++
T Consensus 23 ~~~l~~~l~~l~~~~~~~~r~~A~~~L~~~~~~p~~~~~~~~l------L~--~~~~~~vr~~aa~~L~~~i~~~w~~l~ 94 (963)
T 2x19_B 23 VENVEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWQL------LQ--PDKVPEIQYFGASALHIKISRYWSDIP 94 (963)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHSTTHHHHHHHH------TS--TTSCHHHHHHHHHHHHHHHHHCGGGSC
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCHHHHHHHHHH------hc--CCCchHHHHHHHHHHHHHHHhCHHhCC
Confidence 4456677788555668889999999999999999888876553 11 2457788889998888873 56
Q ss_pred chhhHHhhh
Q 030369 94 PANAAIITK 102 (178)
Q Consensus 94 ~~nk~~I~~ 102 (178)
+..|..|.+
T Consensus 95 ~~~~~~ir~ 103 (963)
T 2x19_B 95 TDQYESLKA 103 (963)
T ss_dssp GGGHHHHHH
T ss_pred HHHHHHHHH
Confidence 666777654
No 100
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=41.34 E-value=74 Score=25.49 Aligned_cols=65 Identities=11% Similarity=0.141 Sum_probs=40.8
Q ss_pred hhHHHHhhcCCchhHHHHHHHHHHHhcCC-c--ccccccchHHHHHHHHhhhhcccchhHHHhHHHHHH
Q 030369 106 IPLIIECLSSPVRNTVNHALGALYYLCSM-S--TKEEILKPEVVDVIRRYAAAESVNVSFSNLAKAFLD 171 (178)
Q Consensus 106 i~~li~lLsS~~~evv~~AlttL~~L~~~-~--sr~~I~~p~ll~ll~~~~~~~~~~~~~~nla~~fL~ 171 (178)
+..|.+-|.++++.+++.||+.|=.|+.- . -..+|-+-.+++.|.+.-.. ..++.+++.+-..++
T Consensus 47 ~ral~krl~~~n~~v~l~aL~LLe~~vkNcG~~f~~eias~~fl~~l~~l~~~-~~~~~Vk~kil~li~ 114 (226)
T 3zyq_A 47 VNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKR-QVEVNVRNKILYLIQ 114 (226)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCHHHHHHHSSHHHHHHHHHHHHH-CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHhcchHHHHhhccHHHHHHHHHHhcc-CCCHHHHHHHHHHHH
Confidence 55677778899999999999988777633 2 35556666666555544321 123455555544444
No 101
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=40.22 E-value=1.2e+02 Score=22.98 Aligned_cols=67 Identities=15% Similarity=0.101 Sum_probs=44.3
Q ss_pred hhHHHHhhcCCchhHHHHHHHHHHHhcCC---cccccccchHHHHHHHHhhhh----cccchhHHHhHHHHHHh
Q 030369 106 IPLIIECLSSPVRNTVNHALGALYYLCSM---STKEEILKPEVVDVIRRYAAA----ESVNVSFSNLAKAFLDK 172 (178)
Q Consensus 106 i~~li~lLsS~~~evv~~AlttL~~L~~~---~sr~~I~~p~ll~ll~~~~~~----~~~~~~~~nla~~fL~~ 172 (178)
+..|.+-|.++++.+++.|++.|=.|+.- .-..+|-+-.+++-|.+.-.. +..++.+++.+-.+++.
T Consensus 50 ~ral~krl~~~n~~v~l~AL~LLe~cvkNCG~~fh~eias~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~ 123 (149)
T 3g2s_A 50 TRLLAHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYS 123 (149)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHCCHHHHHHHTSHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHHcccccCCCCCHHHHHHHHHHHHH
Confidence 56777778899999999999888777632 235667677777776654321 12245666666655544
No 102
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
Probab=38.80 E-value=1.7e+02 Score=26.63 Aligned_cols=99 Identities=9% Similarity=0.068 Sum_probs=65.5
Q ss_pred HHHHHHHHHHhhhhccCcccHHHhhhcc--ChHHHHhhhcC--------------C---cHHHHHHHHHHHHhhcCCchh
Q 030369 36 EERKEKIVANLANFAYDPYNYTFLRQLN--VLELFLDCITE--------------P---NEKLVEFGVGGICNASVDPAN 96 (178)
Q Consensus 36 ~e~keqvlanLaNfAyDP~N~~~LrqL~--vidlfld~L~~--------------~---n~~l~EfAiggLcNL~~D~~n 96 (178)
.+.+.-.+.-|.-..+-+.-+...-+.+ .++.+++.+.. + +..++=.++.|+|=|+=++..
T Consensus 182 ~~~~~i~v~~L~~Ll~~~~~R~~f~~~~~~~~~~l~~il~~~~~~~~~~~~~~~~~~~~~~Ql~Y~~ll~iWlLSF~~~~ 261 (480)
T 1ho8_A 182 MDTCYVCIRLLQELAVIPEYRDVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLLLIWLLTFNPVF 261 (480)
T ss_dssp HHHHHHHHHHHHHHHTSHHHHHHHHTTHHHHHHHHHHHHHHHHC-------------CCHHHHHHHHHHHHHHHTTSHHH
T ss_pred CchHHHHHHHHHHHhcchhHHHHHHHcccchhHHHHHHHHHhhccccccccccccCCCccHHHHHHHHHHHHHHHcCHHH
Confidence 3444444444555556666665554332 34555443331 1 456788899999999999988
Q ss_pred hHHhhhcCChh---HHHHhh-cCCchhHHHHHHHHHHHhcCCc
Q 030369 97 AAIITKSGGIP---LIIECL-SSPVRNTVNHALGALYYLCSMS 135 (178)
Q Consensus 97 k~~I~~~gGi~---~li~lL-sS~~~evv~~AlttL~~L~~~~ 135 (178)
.+.+... ++. .++..+ .++.+-|+.=++.+|.||+...
T Consensus 262 ~~~l~~~-~i~~~~~L~~i~k~s~KEKvvRv~la~l~Nll~~~ 303 (480)
T 1ho8_A 262 ANELVQK-YLSDFLDLLKLVKITIKEKVSRLCISIILQCCSTR 303 (480)
T ss_dssp HHHHHTT-SHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTSSS
T ss_pred HHHHHhc-chHHHHHHHHHHHhhccchhHHHHHHHHHHHhccc
Confidence 8888665 454 444545 6778999999999999999763
No 103
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=38.59 E-value=59 Score=25.13 Aligned_cols=68 Identities=15% Similarity=0.115 Sum_probs=46.4
Q ss_pred hhHHHHhhcCCchhHHHHHHHHHHHhcCC---cccccccchHHHHHHHHhhhh----cccchhHHHhHHHHHHhh
Q 030369 106 IPLIIECLSSPVRNTVNHALGALYYLCSM---STKEEILKPEVVDVIRRYAAA----ESVNVSFSNLAKAFLDKH 173 (178)
Q Consensus 106 i~~li~lLsS~~~evv~~AlttL~~L~~~---~sr~~I~~p~ll~ll~~~~~~----~~~~~~~~nla~~fL~~~ 173 (178)
+..|.+-|.++++.+++.|++.|=.|+.- .-..+|-+-.+++-|.+.-.. ...+.++++.+-.+++.+
T Consensus 52 ~ral~krl~~~n~~vql~AL~LLd~~vkNCG~~Fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W 126 (171)
T 1juq_A 52 VRLLAHKIQSPQEWEALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSW 126 (171)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHH
Confidence 56677778899999999999988777733 245567677777777665431 123456777776666543
No 104
>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens}
Probab=38.35 E-value=89 Score=30.85 Aligned_cols=132 Identities=8% Similarity=-0.005 Sum_probs=72.8
Q ss_pred hHHHHHHHHHHhhhhc-cCcccHHHhhhc--cChHHHHhhhcCCcHHHHHHHHHHHHhhcC---CchhhHHhhhc---CC
Q 030369 35 DEERKEKIVANLANFA-YDPYNYTFLRQL--NVLELFLDCITEPNEKLVEFGVGGICNASV---DPANAAIITKS---GG 105 (178)
Q Consensus 35 ~~e~keqvlanLaNfA-yDP~N~~~LrqL--~vidlfld~L~~~n~~l~EfAiggLcNL~~---D~~nk~~I~~~---gG 105 (178)
+.+...+++..+.+|- +-|.|+.. +- ..++.+...+. ++.+.+-|+.||+.++- +|..+..++.. .+
T Consensus 220 ~~~l~~~aL~~l~~~l~Wi~~~~i~--~~~~~ll~~l~~~l~--~~~lr~~A~ecL~~i~s~~~~~~~~~~li~~l~~~~ 295 (1204)
T 3a6p_A 220 NCRVGVAALNTLAGYIDWVSMSHIT--AENCKLLEILCLLLN--EQELQLGAAECLLIAVSRKGKLEDRKPLMVLFGDVA 295 (1204)
T ss_dssp HHHHHHHHHHHHHTTTTTSCHHHHH--TTTSHHHHHHHHGGG--CTTTHHHHHHHHHHHHTCCSCHHHHGGGGGGGSHHH
T ss_pred hHHHHHHHHHHHHHHHhccCHHHHH--hccchHHHHHHHHcC--CHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHhhHH
Confidence 3456778888888886 45655433 33 37888887766 45678999999999974 34554444321 22
Q ss_pred hhHHHHhhc--C----C--chhHHHHHHH-HHH-------HhcCC--cccccccchHHHHHHHHhhhhcccchhHHHhHH
Q 030369 106 IPLIIECLS--S----P--VRNTVNHALG-ALY-------YLCSM--STKEEILKPEVVDVIRRYAAAESVNVSFSNLAK 167 (178)
Q Consensus 106 i~~li~lLs--S----~--~~evv~~Alt-tL~-------~L~~~--~sr~~I~~p~ll~ll~~~~~~~~~~~~~~nla~ 167 (178)
+..+++.+. + . +.++.+ .++ .+. .++.. ..+..-....++++|.++-.+. +.-++-.+-
T Consensus 296 l~~l~~~~~~~~~~~~~e~d~e~~k-~l~~ll~~lg~~l~~l~~~~~~~~~~~~l~~~l~~lL~~t~~~--~~~vs~~~l 372 (1204)
T 3a6p_A 296 MHYILSAAQTADGGGLVEKHYVFLK-RLCQVLCALGNQLCALLGADSDVETPSNFGKYLESFLAFTTHP--SQFLRSSTQ 372 (1204)
T ss_dssp HHHHHHHHHTCCCCSCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTCSSCCCCTTHHHHHHHHHHHHTSS--CHHHHHHHH
T ss_pred HHHHHHHhhcCCCCCCccHHHHHHH-HHHHHHHHHHHHHHHHHhccccccChhHHHHHHHHHHHHHhCc--cHHhHHHHH
Confidence 344555542 1 1 122221 222 111 11111 0112223467888888877754 355666666
Q ss_pred HHHHhh
Q 030369 168 AFLDKH 173 (178)
Q Consensus 168 ~fL~~~ 173 (178)
-|...+
T Consensus 373 ~fW~~l 378 (1204)
T 3a6p_A 373 MTWGAL 378 (1204)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555443
No 105
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=37.24 E-value=1.1e+02 Score=25.66 Aligned_cols=57 Identities=14% Similarity=0.081 Sum_probs=41.2
Q ss_pred cHHHHHHHHHHHHhhcCCchhhHHhhhc--CChhHHHHhhcCCchhHHHHHHHHHHHhc
Q 030369 76 NEKLVEFGVGGICNASVDPANAAIITKS--GGIPLIIECLSSPVRNTVNHALGALYYLC 132 (178)
Q Consensus 76 n~~l~EfAiggLcNL~~D~~nk~~I~~~--gGi~~li~lLsS~~~evv~~AlttL~~L~ 132 (178)
++..+--++=.+|||-..+..++.+... .-++.+..++.+++.++...+.|.+||+.
T Consensus 161 ~p~n~ml~lR~l~NlF~~~~g~~~l~~~~~~il~~~~~~~~~~nknl~iA~ATl~~NlA 219 (304)
T 3ebb_A 161 KPANQLLALRTFCNCFVGQAGQKLMMSQRESLMSHAIELKSGSNKNIHIALATLALNYS 219 (304)
T ss_dssp CHHHHHHHHHHHHHGGGSHHHHHHHHHTHHHHHHHHHGGGSSCCHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHccCCchhHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHH
Confidence 4555777888999999999888887753 11234455556677888888888888876
No 106
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=37.14 E-value=1e+02 Score=27.01 Aligned_cols=89 Identities=13% Similarity=0.234 Sum_probs=64.4
Q ss_pred HHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhH----HhhhcCChhHHHHhhcCCchhHHHHHHHHHH-HhcCCcccccc
Q 030369 66 ELFLDCITEPNEKLVEFGVGGICNASVDPANAA----IITKSGGIPLIIECLSSPVRNTVNHALGALY-YLCSMSTKEEI 140 (178)
Q Consensus 66 dlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~----~I~~~gGi~~li~lLsS~~~evv~~AlttL~-~L~~~~sr~~I 140 (178)
+-+-.+|.++|=+...-++-=|..+-+|+.|.. +|-+...+..++.+|+++...++..|.-.+= +..+|.--++|
T Consensus 212 ~~y~~Ll~S~NYVTkRQSlKLLgelLldr~N~~vM~~Yis~~~nLkl~M~LL~d~sk~Iq~EAFhVFKvFVANP~K~~~I 291 (341)
T 1upk_A 212 SEYEKLLHSENYVTKRQSLKLLGELLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPI 291 (341)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHHHHSGGGHHHHHHHTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHCSSCCHHH
T ss_pred HHHHHHhcCCcchhHHHHHHHHHHHHhCchHHHHHHHHhCCHHHHHHHHHHhcCchhchhhhhhhheeeeeeCCCCChHH
Confidence 344456667777888889999999999998875 4556677899999999999999998887774 44455323333
Q ss_pred c------chHHHHHHHHhhh
Q 030369 141 L------KPEVVDVIRRYAA 154 (178)
Q Consensus 141 ~------~p~ll~ll~~~~~ 154 (178)
. ..-|++.+..|..
T Consensus 292 ~~IL~~Nr~kLl~fl~~f~~ 311 (341)
T 1upk_A 292 LDILLKNQAKLIEFLSKFQN 311 (341)
T ss_dssp HHHHHHTHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHhCCC
Confidence 3 2666666766665
No 107
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=36.36 E-value=3.3e+02 Score=26.96 Aligned_cols=35 Identities=14% Similarity=0.231 Sum_probs=22.7
Q ss_pred CCChHHHHHHHHHHhhcCChHHHHHHHHHHhhhhc
Q 030369 16 GTPRLQYLQELVSQFQNSTDEERKEKIVANLANFA 50 (178)
Q Consensus 16 g~~R~~ylq~LV~efq~t~~~e~keqvlanLaNfA 50 (178)
|++--+.++.|++-..++.++..+.-+.-.|+...
T Consensus 502 GTgn~~ai~~LL~~~~e~~~e~vrR~aalgLGll~ 536 (963)
T 4ady_A 502 GTGKPEAIHDMFTYSQETQHGNITRGLAVGLALIN 536 (963)
T ss_dssp TCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHHhccCcHHHHHHHHHHHHhhh
Confidence 45555666777776666766676666666666543
No 108
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=35.80 E-value=47 Score=27.70 Aligned_cols=46 Identities=9% Similarity=0.041 Sum_probs=28.1
Q ss_pred CCh---hHHHHhhcCCchhHHHHHHHHH---HHhcCCccccccc--chHHHHHH
Q 030369 104 GGI---PLIIECLSSPVRNTVNHALGAL---YYLCSMSTKEEIL--KPEVVDVI 149 (178)
Q Consensus 104 gGi---~~li~lLsS~~~evv~~AlttL---~~L~~~~sr~~I~--~p~ll~ll 149 (178)
.++ |.|.++++++|.+|-..|+.|+ |..+.+.-++.+. .|.-.+.+
T Consensus 204 ~~l~~~~~ia~ll~D~d~~VR~aAl~~lve~y~~~Gd~v~k~lg~L~~~~~~~l 257 (266)
T 2of3_A 204 KSLSVEKTVAPFVGDKDVNVRNAAINVLVACFKFEGDQMWKAAGRMADKDKSLV 257 (266)
T ss_dssp GGGCHHHHHGGGGGCSSHHHHHHHHHHHHHHHHHHTTHHHHHHCCCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCHHHHHHH
Confidence 468 8899999999887776666655 4544444333332 34444444
No 109
>2osa_A N-chimaerin; RHO-GAP, GTPase activation, structural genomics, structural genomics consortium, SGC, signaling protein; 1.80A {Homo sapiens}
Probab=35.66 E-value=36 Score=26.37 Aligned_cols=14 Identities=21% Similarity=0.472 Sum_probs=8.1
Q ss_pred ccChHHHHhhhcCC
Q 030369 62 LNVLELFLDCITEP 75 (178)
Q Consensus 62 L~vidlfld~L~~~ 75 (178)
.+++-.|+-.|-++
T Consensus 83 a~lLK~flreLpeP 96 (202)
T 2osa_A 83 TGALKLYFRDLPIP 96 (202)
T ss_dssp HHHHHHHHHTCSSC
T ss_pred HHHHHHHHHhCCCc
Confidence 35555666666554
No 110
>3o2t_A Symplekin; heat repeat, scaffold, protein binding; 1.40A {Homo sapiens} PDB: 3odr_A 3ods_A 4h3k_A* 3o2s_A 3o2q_A* 4h3h_A*
Probab=34.61 E-value=2.3e+02 Score=24.87 Aligned_cols=104 Identities=18% Similarity=0.159 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhc-cCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHH
Q 030369 21 QYLQELVSQFQNSTDEERKEKIVANLANFA-YDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAI 99 (178)
Q Consensus 21 ~ylq~LV~efq~t~~~e~keqvlanLaNfA-yDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~ 99 (178)
+||..++ +|+...+.+.|..+..=++==. .|+.. -..+++.+...|..+++.++..+|.+.+++- |..=.+
T Consensus 63 ~fl~~il-~f~~d~~~~vRk~~a~FieEa~~~~~el-----~~~~l~~L~~LL~d~d~~V~K~~I~~~tslY--pl~f~~ 134 (386)
T 3o2t_A 63 NFLDEII-AFQADKSIEVRKFVIGFIEEACKRDIEL-----LLKLIANLNMLLRDENVNVVKKAILTMTQLY--KVALQW 134 (386)
T ss_dssp GGHHHHH-GGGGCSCHHHHHHHHHHHHHHHHHCGGG-----HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHH--HHHHHH
T ss_pred HHHHHHH-HhccCCcHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH--HHHHHH
Q ss_pred hhhcCChh---------------HHHHhhcCCchhHHHHHHHHHHHhc
Q 030369 100 ITKSGGIP---------------LIIECLSSPVRNTVNHALGALYYLC 132 (178)
Q Consensus 100 I~~~gGi~---------------~li~lLsS~~~evv~~AlttL~~L~ 132 (178)
|..+++.+ -|++.+.+.+..|...|+-.+--++
T Consensus 135 i~~~~~~~~~~e~~W~~m~~lK~~Il~~~ds~n~GVrl~aiKFle~VI 182 (386)
T 3o2t_A 135 MVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIRTHAIKFVEGLI 182 (386)
T ss_dssp HHHC-CCCHHHHHHHHHHHHHHHHHHHGGGCSSHHHHHHHHHHHHHHH
T ss_pred HhcCCCcchhHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHH
No 111
>3byi_A RHO GTPase activating protein 15; BM046, arhgap15, structural genomics consortium, signaling protein; 2.25A {Homo sapiens}
Probab=34.51 E-value=44 Score=26.12 Aligned_cols=14 Identities=29% Similarity=0.643 Sum_probs=8.6
Q ss_pred ccChHHHHhhhcCC
Q 030369 62 LNVLELFLDCITEP 75 (178)
Q Consensus 62 L~vidlfld~L~~~ 75 (178)
.+++-.|+-.|-++
T Consensus 93 a~lLK~flreLPeP 106 (214)
T 3byi_A 93 TGALKMFFRELPEP 106 (214)
T ss_dssp HHHHHHHHHHSSSC
T ss_pred HHHHHHHHHhCCCC
Confidence 35566666666655
No 112
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}
Probab=33.98 E-value=96 Score=25.88 Aligned_cols=61 Identities=21% Similarity=0.363 Sum_probs=42.8
Q ss_pred hhHHHHhhcCCchhHHHHHHHHHHHhcCCcccccccchHHHHHHHHhhhhcccchhHHHhHHHH
Q 030369 106 IPLIIECLSSPVRNTVNHALGALYYLCSMSTKEEILKPEVVDVIRRYAAAESVNVSFSNLAKAF 169 (178)
Q Consensus 106 i~~li~lLsS~~~evv~~AlttL~~L~~~~sr~~I~~p~ll~ll~~~~~~~~~~~~~~nla~~f 169 (178)
++.+|++|...-=.|++||++.++... ..+++...|-+=+++--.+.|+. -+-...+|.+|
T Consensus 34 l~~lI~~LDDDlwtV~kNAl~vi~~i~--~~~~el~epl~~kL~vm~~ksEa-IpltqeIa~a~ 94 (253)
T 2db0_A 34 LKKLIELLDDDLWTVVKNAISIIMVIA--KTREDLYEPMLKKLFSLLKKSEA-IPLTQEIAKAF 94 (253)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHH--TTCGGGHHHHHHHHHHHHHHCCS-HHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHhHHHHHHHHH--HHhHHHHHHHHHHHHHHHhhccc-CchHHHHHHHH
Confidence 566778887654568999999999988 44777777777777666666553 33346666665
No 113
>3mq1_A Mite allergen DER P 5; DUST mite; HET: MRD MPD; 2.80A {Dermatophagoides pteronyssinus}
Probab=33.07 E-value=37 Score=25.01 Aligned_cols=26 Identities=46% Similarity=0.696 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHhhcCChHHHHHHHHH
Q 030369 19 RLQYLQELVSQFQNSTDEERKEKIVA 44 (178)
Q Consensus 19 R~~ylq~LV~efq~t~~~e~keqvla 44 (178)
.+=||++=|+|+-.|++.+.|+||+.
T Consensus 19 ~Ll~Ls~Qi~~LEktKsKe~K~~Ilr 44 (103)
T 3mq1_A 19 ALFYLQEQINHFEEKPTKEMKDKIVA 44 (103)
T ss_dssp HHHHHHHHHHHHHHSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCcHHHHHHHHH
Confidence 45689999999999999999999863
No 114
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=32.96 E-value=38 Score=25.63 Aligned_cols=68 Identities=13% Similarity=0.038 Sum_probs=45.7
Q ss_pred ChhHHHHhhcCCchhHHHHHHHHHHHhcCC---cccccccchHHHHHHHHhhhh----cccchhHHHhHHHHHHh
Q 030369 105 GIPLIIECLSSPVRNTVNHALGALYYLCSM---STKEEILKPEVVDVIRRYAAA----ESVNVSFSNLAKAFLDK 172 (178)
Q Consensus 105 Gi~~li~lLsS~~~evv~~AlttL~~L~~~---~sr~~I~~p~ll~ll~~~~~~----~~~~~~~~nla~~fL~~ 172 (178)
.+..|.+-|.++++.+++.|++.|=.|+.- .-..+|-+-.+++-|.+.-.. ...+..+++.+-..++.
T Consensus 39 a~rai~krl~~~n~~vql~AL~LLe~~vkNCG~~fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~ 113 (148)
T 1mhq_A 39 APWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFS 113 (148)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHHccccCCCCCCHHHHHHHHHHHHH
Confidence 356777778899999999999888776633 345677777888777655331 11245666666555554
No 115
>3nfq_A Transcription factor IWS1; SPN1, RNA polymerase II; 1.85A {Saccharomyces cerevisiae} PDB: 3o8z_A 3oak_A
Probab=32.35 E-value=1.8e+02 Score=22.94 Aligned_cols=145 Identities=17% Similarity=0.200 Sum_probs=82.3
Q ss_pred HhhCCCCCChHHHHHHHHHHhhcCChHHHHHHHHH-HhhhhccCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHH
Q 030369 10 ERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVA-NLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGIC 88 (178)
Q Consensus 10 ~rt~~~g~~R~~ylq~LV~efq~t~~~e~keqvla-nLaNfAyDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLc 88 (178)
||+-+++.+--++.-..|.+....=..-|.+..-+ |=++ .-.--..+.+.++..+|-+.+.|.-.+
T Consensus 1 ~r~~~~~~dl~~~~Dd~i~~L~~~M~~Aa~~D~~~~n~~~-~~~~~~~PAl~KLkmL~~V~~~L~k~~------------ 67 (170)
T 3nfq_A 1 RRTRRDEDDLEQYLDEKILRLKDEMNIAAQLDIDTLNKRI-ETGDTSLIAMQKVKLLPKVVSVLSKAN------------ 67 (170)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCTTCCCCHHHHHHHHHHHHHTCGG------------
T ss_pred CCccchhhhHHHhhhHHHHHHHHHHHHHHHHhHHHHHhhh-ccccccccHHHHHhhHHHHHHHHhHHH------------
Confidence 46667777766666666665554322222222111 1000 001123678889999998888887653
Q ss_pred hhcCCchhhHHhhhcCChhHHHHhh------cCCchhHHHHHHHHHHHhcCCcccccccchHHHHHHHHhhhhcccchhH
Q 030369 89 NASVDPANAAIITKSGGIPLIIECL------SSPVRNTVNHALGALYYLCSMSTKEEILKPEVVDVIRRYAAAESVNVSF 162 (178)
Q Consensus 89 NL~~D~~nk~~I~~~gGi~~li~lL------sS~~~evv~~AlttL~~L~~~~sr~~I~~p~ll~ll~~~~~~~~~~~~~ 162 (178)
-+..++++|.+.-|..-| |=|+-++....+.+|..|- -.+..+....+=+.+.-|..+..+.+.+
T Consensus 68 -------L~~~~ld~giL~~l~~WLePLpDgSLP~~~Ir~~lL~~L~~lP--I~~e~Lk~SglGkvV~~l~k~~~et~~n 138 (170)
T 3nfq_A 68 -------LADTILDNNLLQSVRIWLEPLPDGSLPSFEIQKSLFAALNDLP--VKTEHLKESGLGRVVIFYTKSKRVEAQL 138 (170)
T ss_dssp -------GHHHHHHTTHHHHHHHHHSCCTTSCCCCHHHHHHHHHHHHTSC--CCHHHHHHHSHHHHHHHHHHCTTSCHHH
T ss_pred -------HHHHHHHcchHHHHHHHhCcCCCCCCCcHHHHHHHHHHHHHCC--CCHHHHhhCCCCceeeehhcCCcccHHH
Confidence 244555666666665554 4556678888888888873 3355555555556666666655556778
Q ss_pred HHhHHHHHHhhccC
Q 030369 163 SNLAKAFLDKHVTE 176 (178)
Q Consensus 163 ~nla~~fL~~~~~~ 176 (178)
+.+|.-.++++-.|
T Consensus 139 krla~~Li~~WsRp 152 (170)
T 3nfq_A 139 ARLAEKLIAEWTRP 152 (170)
T ss_dssp HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHH
Confidence 88998888887543
No 116
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}
Probab=32.13 E-value=41 Score=28.14 Aligned_cols=52 Identities=23% Similarity=0.305 Sum_probs=40.0
Q ss_pred hhHHHHhhcCCchhHHHHHHHHHHHhcCCcccccccchHHHHHHHHhhh-hcccch
Q 030369 106 IPLIIECLSSPVRNTVNHALGALYYLCSMSTKEEILKPEVVDVIRRYAA-AESVNV 160 (178)
Q Consensus 106 i~~li~lLsS~~~evv~~AlttL~~L~~~~sr~~I~~p~ll~ll~~~~~-~~~~~~ 160 (178)
+|.++.+|...|+-|-.||++||-.|..- ++. ..|.+.+.+.+|.. |+.++.
T Consensus 183 LprL~aLL~D~deiVRaSaVEtL~~lA~~--npk-lRkii~~kl~e~~D~S~lv~~ 235 (253)
T 2db0_A 183 LPRIINLLHDGDEIVRASAVEALVHLATL--NDK-LRKVVIKRLEELNDTSSLVNK 235 (253)
T ss_dssp HHHHHGGGGCSSHHHHHHHHHHHHHHHTS--CHH-HHHHHHHHHHHCCCSCHHHHH
T ss_pred hHHHHHHHcCcchhhhHHHHHHHHHHHHc--CHH-HHHHHHHHHHHhcCcHHHHHH
Confidence 78899999999888889999999998743 233 56778888888887 444333
No 117
>1f7c_A Rhogap protein; GTPase activating protein, RHO GTPase regulator, BH domain, signaling protein; 2.40A {Gallus gallus} SCOP: a.116.1.1
Probab=31.72 E-value=59 Score=25.85 Aligned_cols=13 Identities=23% Similarity=0.577 Sum_probs=7.0
Q ss_pred cChHHHHhhhcCC
Q 030369 63 NVLELFLDCITEP 75 (178)
Q Consensus 63 ~vidlfld~L~~~ 75 (178)
+++-.|+--|-++
T Consensus 99 ~lLK~flReLPeP 111 (231)
T 1f7c_A 99 SALKTYLRMLPGP 111 (231)
T ss_dssp HHHHHHHHTSSSC
T ss_pred HHHHHHHHHCCCC
Confidence 4455566555544
No 118
>2ee4_A RHO GTPase activating protein 5 variant; all alpha protein, GTPase-activating protein for RHO family members, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2ee5_A
Probab=31.58 E-value=64 Score=25.05 Aligned_cols=13 Identities=23% Similarity=0.595 Sum_probs=7.1
Q ss_pred cChHHHHhhhcCC
Q 030369 63 NVLELFLDCITEP 75 (178)
Q Consensus 63 ~vidlfld~L~~~ 75 (178)
+++-.|+--|-++
T Consensus 85 ~lLK~flreLPeP 97 (209)
T 2ee4_A 85 GALKAFFADLPDP 97 (209)
T ss_dssp HHHHHHHHHSSSC
T ss_pred HHHHHHHHhCCCc
Confidence 4455566666544
No 119
>3msx_B RHO GTPase-activating protein 20; protein-proten complex, transition state, protein BI; HET: GDP; 1.65A {Homo sapiens}
Probab=30.74 E-value=61 Score=24.91 Aligned_cols=13 Identities=38% Similarity=0.465 Sum_probs=7.1
Q ss_pred cChHHHHhhhcCC
Q 030369 63 NVLELFLDCITEP 75 (178)
Q Consensus 63 ~vidlfld~L~~~ 75 (178)
+++-.|+--|-++
T Consensus 82 ~lLK~flreLp~p 94 (201)
T 3msx_B 82 SVLKDFLRNIPGS 94 (201)
T ss_dssp HHHHHHHHTSTTT
T ss_pred HHHHHHHHhCCCC
Confidence 4455566555544
No 120
>2gom_A Fibrinogen-binding protein; three-helix closed bundle with LEFT-hand twist, cell adhesio complex; 1.25A {Staphylococcus aureus} SCOP: a.7.17.1 PDB: 2gox_B 3d5s_C 3d5r_C
Probab=30.18 E-value=35 Score=22.59 Aligned_cols=34 Identities=29% Similarity=0.503 Sum_probs=26.4
Q ss_pred HHHHHHHhhcCC--hHHHHHHHHHHhhhhccCcccH
Q 030369 23 LQELVSQFQNST--DEERKEKIVANLANFAYDPYNY 56 (178)
Q Consensus 23 lq~LV~efq~t~--~~e~keqvlanLaNfAyDP~N~ 56 (178)
-|.+|.||..|. +...|-|-.-||--|-|--.-.
T Consensus 10 AQ~~V~~F~~T~TV~~HRKAQ~AVNLi~F~~~~~K~ 45 (61)
T 2gom_A 10 AQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKVKKM 45 (61)
T ss_dssp HHHHHHHHHHHCBHHHHHHHHHHHHHSCGGGHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhhHHhHHHHHHHH
Confidence 378999999885 5567888888999998754433
No 121
>3iug_A RHO/CDC42/RAC GTPase-activating protein RICS; structural genomics consortium (SGC), GAP, alternative splicing, cell junction, cell membrane; 1.77A {Homo sapiens}
Probab=29.62 E-value=62 Score=25.58 Aligned_cols=13 Identities=15% Similarity=0.554 Sum_probs=6.5
Q ss_pred cChHHHHhhhcCC
Q 030369 63 NVLELFLDCITEP 75 (178)
Q Consensus 63 ~vidlfld~L~~~ 75 (178)
+++-.|+--|-++
T Consensus 96 ~lLK~fLreLPeP 108 (229)
T 3iug_A 96 SLCKLYFRELPNP 108 (229)
T ss_dssp HHHHHHHHHCSSC
T ss_pred HHHHHHHHHCCCC
Confidence 4444555555443
No 122
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=29.58 E-value=86 Score=24.74 Aligned_cols=66 Identities=12% Similarity=0.173 Sum_probs=43.0
Q ss_pred hhHHHHhhcCCchhHHHHHHHHHHHhcCC---cccccccchHHHHHHHHhhhhcccchhHHHhHHHHHHh
Q 030369 106 IPLIIECLSSPVRNTVNHALGALYYLCSM---STKEEILKPEVVDVIRRYAAAESVNVSFSNLAKAFLDK 172 (178)
Q Consensus 106 i~~li~lLsS~~~evv~~AlttL~~L~~~---~sr~~I~~p~ll~ll~~~~~~~~~~~~~~nla~~fL~~ 172 (178)
+..|.+-|.++++.+++.|++.|=.|+.. .-..+|-+-.+++-|.+.-.. ..+..+++.+-.+++.
T Consensus 44 ~r~l~krl~~~n~~~~l~aL~Lle~~vkNcG~~f~~eva~~~fl~~l~~l~~~-~~~~~Vk~kil~li~~ 112 (220)
T 1dvp_A 44 FAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCEMFSSFLES-TPHENVRQKMLELVQT 112 (220)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHSSHHHHHHHHHHHHH-CSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHhccCHHHHHHHHhHHHHHHHHHHhcC-CCcHHHHHHHHHHHHH
Confidence 45666777889999999999888777733 234567777777777665432 2244555555544443
No 123
>3gs3_A Symplekin, LD45768P; helix-turn-helix heat repeat extended loop, transcription, protein binding; 2.40A {Drosophila melanogaster}
Probab=29.37 E-value=2.4e+02 Score=23.17 Aligned_cols=94 Identities=10% Similarity=0.081 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHhhhhccCcccHHHhhh-----------------ccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhh
Q 030369 35 DEERKEKIVANLANFAYDPYNYTFLRQ-----------------LNVLELFLDCITEPNEKLVEFGVGGICNASVDPANA 97 (178)
Q Consensus 35 ~~e~keqvlanLaNfAyDP~N~~~Lrq-----------------L~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk 97 (178)
+.+.=.+++-.+..|+.||. .-+|+ ..+++.+...|..+++.++..+|.+.+++- |..=
T Consensus 47 dp~ll~~~l~~il~~~~~~~--~~vrk~~~~Fi~e~~~~k~~l~~~~l~~L~~Ll~d~d~~V~K~~I~~~~~iY--~~~l 122 (257)
T 3gs3_A 47 CAELAEEFLESVLSLAHDSN--MEVRKQVVAFVEQVCKVKVELLPHVINVVSMLLRDNSAQVIKRVIQACGSIY--KNGL 122 (257)
T ss_dssp TGGGHHHHHHHHHGGGGCSC--HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHH--HHHH
T ss_pred CHhHHHHHHHHHHHhccCCh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH--HHHH
Confidence 33455666666666776642 22222 245666667777789999999999988872 3333
Q ss_pred HHhhhcCCh---------------hHHHHhhcCCchhHHHHHHHHHHHhc
Q 030369 98 AIITKSGGI---------------PLIIECLSSPVRNTVNHALGALYYLC 132 (178)
Q Consensus 98 ~~I~~~gGi---------------~~li~lLsS~~~evv~~AlttL~~L~ 132 (178)
.+|..+++. .-|++...+.+..+..+|+-.+--++
T Consensus 123 ~~i~~~~~~~~~~~~~W~~m~~lK~~Il~~~~s~n~gvkl~~iKF~e~vI 172 (257)
T 3gs3_A 123 QYLCSLMEPGDSAEQAWNILSLIKAQILDMIDNENDGIRTNAIKFLEGVV 172 (257)
T ss_dssp HHHTTSSSCCHHHHHHHHHHHHHHHHHHHGGGSSCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCcchHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHH
Confidence 344444442 13456677778999999996665444
No 124
>2xpp_A IWS1, ECU08_0440; transcription, elongation, histone chaperone, RNA polymerase mRNA export; 1.74A {Encephalitozoon cuniculi} PDB: 2xpo_A 2xpn_A 2xpl_A
Probab=28.60 E-value=1.9e+02 Score=21.97 Aligned_cols=101 Identities=17% Similarity=0.132 Sum_probs=68.4
Q ss_pred ccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHhhhcCChhHHHHhh------cCCchhHHHHHHHH
Q 030369 54 YNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECL------SSPVRNTVNHALGA 127 (178)
Q Consensus 54 ~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I~~~gGi~~li~lL------sS~~~evv~~Altt 127 (178)
...+.+.++..++-+.+.|.-.+ -+..++++|-+.-|..-| |=|+.++...-+.+
T Consensus 30 ~~~PA~~KlklL~~V~~~l~k~~-------------------l~~~~ld~giL~~l~~WL~PLpDgsLP~~~Ir~~lL~~ 90 (145)
T 2xpp_A 30 EGRPATGKIENVEEISDILMSKA-------------------LQESLLDEGILDEIKGWLEPLPDKSMPNIKIRKRLLDV 90 (145)
T ss_dssp HTSCCCHHHHHHHHHHHHHTCTT-------------------THHHHHHTTHHHHHHHHHSCCTTSCCCCHHHHHHHHHH
T ss_pred cCChHHHHHhhHHHHHHHHhhHH-------------------HHHHHHHcCHHHHHHHHhCcCCCCCCCCHHHHHHHHHH
Confidence 34556777777777777766443 234555655555555554 45567788888888
Q ss_pred HHHhcCCcccccccchHHHHHHHHhhhhcccchhHHHhHHHHHHhhcc
Q 030369 128 LYYLCSMSTKEEILKPEVVDVIRRYAAAESVNVSFSNLAKAFLDKHVT 175 (178)
Q Consensus 128 L~~L~~~~sr~~I~~p~ll~ll~~~~~~~~~~~~~~nla~~fL~~~~~ 175 (178)
|..|- -.+..+....+-+.+--|..+..+.+.++.+|.-.++++-.
T Consensus 91 L~~lP--I~~e~Lk~SglGkvv~~l~k~~~et~~nk~la~~Li~~WsR 136 (145)
T 2xpp_A 91 LKTMK--IHKEHLVTSGVGKIVYFYSINPKESKEVRASAKALVQKWTN 136 (145)
T ss_dssp HHTSC--CCHHHHHHHCHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHCC--CCHHHhhcCCCCcchhhhhcCCccCHHHHHHHHHHHHHHHH
Confidence 88873 33566666667777777777777778899999988888643
No 125
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=27.86 E-value=51 Score=29.02 Aligned_cols=13 Identities=23% Similarity=0.542 Sum_probs=6.6
Q ss_pred cChHHHHhhhcCC
Q 030369 63 NVLELFLDCITEP 75 (178)
Q Consensus 63 ~vidlfld~L~~~ 75 (178)
+++-.|+--|-++
T Consensus 345 ~lLK~flReLPeP 357 (463)
T 3cxl_A 345 GALKLYFRDLPIP 357 (463)
T ss_dssp HHHHHHHHHCSSC
T ss_pred hHHHHHHHhcCCC
Confidence 4445555555544
No 126
>1n4k_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3-binding core, calcium channel,protein- ligand complex, B-trefoil fold; HET: I3P; 2.20A {Mus musculus} SCOP: a.118.22.1 b.42.6.1
Probab=26.56 E-value=1.8e+02 Score=25.15 Aligned_cols=39 Identities=21% Similarity=0.408 Sum_probs=29.9
Q ss_pred HHHHHHHHHhhhhccCccc-----------------HHHhhhccChHHHHhhhcCC
Q 030369 37 ERKEKIVANLANFAYDPYN-----------------YTFLRQLNVLELFLDCITEP 75 (178)
Q Consensus 37 e~keqvlanLaNfAyDP~N-----------------~~~LrqL~vidlfld~L~~~ 75 (178)
+.-.++|..|-.|-.||.+ .+.||+.++|++.+++|..+
T Consensus 248 ~~v~~~L~dLi~F~~~~~~~~~~~l~~~~g~p~r~RQkLlrEq~il~ll~~iL~~~ 303 (381)
T 1n4k_A 248 RSVTKLLEDLVYFVTGGTNSGQDVLEVVFSKPNRERQKLMREQNILKQIFKLLQAP 303 (381)
T ss_dssp HHHHHHHHHHHHHHTTTSCCSSCSGGGGGCCCCHHHHHHHHHTTHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHhcCcchhcccchhhhcCCccHHHHHHHHhhChHHHHHHHHHhh
Confidence 3455677788888888743 35679999999999999754
No 127
>3fk2_A Glucocorticoid receptor DNA-binding factor 1; structural genomics consortium, GTPase-activating protein, SGC, alternative splicing, anti-oncogene; 2.80A {Homo sapiens}
Probab=26.39 E-value=66 Score=25.85 Aligned_cols=27 Identities=4% Similarity=0.108 Sum_probs=12.4
Q ss_pred hhHHHHhhcCCchhHHHHHHHHHHHhc
Q 030369 106 IPLIIECLSSPVRNTVNHALGALYYLC 132 (178)
Q Consensus 106 i~~li~lLsS~~~evv~~AlttL~~L~ 132 (178)
+..++..|-.++-++...-+..|....
T Consensus 164 l~~ll~~LP~~n~~~L~~L~~~L~~V~ 190 (246)
T 3fk2_A 164 LKEVLKKFPKENHEVFKYVISHLNKVS 190 (246)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHH
Confidence 444555554444455444444444333
No 128
>1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5
Probab=26.37 E-value=1.2e+02 Score=24.44 Aligned_cols=22 Identities=18% Similarity=0.051 Sum_probs=11.7
Q ss_pred hhHHHHhhcCCchhHHHHHHHH
Q 030369 106 IPLIIECLSSPVRNTVNHALGA 127 (178)
Q Consensus 106 i~~li~lLsS~~~evv~~Altt 127 (178)
.+.|+.++.+++..|-..++..
T Consensus 196 ~~~L~~Ll~D~d~~VR~~aa~~ 217 (244)
T 1lrv_A 196 GDDLLELLHDPDWTVRLAAVEH 217 (244)
T ss_dssp GGGGGGGGGCSSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHc
Confidence 3455555555555555555444
No 129
>2xpp_A IWS1, ECU08_0440; transcription, elongation, histone chaperone, RNA polymerase mRNA export; 1.74A {Encephalitozoon cuniculi} PDB: 2xpo_A 2xpn_A 2xpl_A
Probab=25.43 E-value=1.5e+02 Score=22.58 Aligned_cols=54 Identities=11% Similarity=0.244 Sum_probs=36.9
Q ss_pred HHHHhhCCCCCChHHHHHHHHHHhhcCC---------------------------hHHHHHHHHHHhhhhccCcccHHHh
Q 030369 7 RQEERTGRSGTPRLQYLQELVSQFQNST---------------------------DEERKEKIVANLANFAYDPYNYTFL 59 (178)
Q Consensus 7 ~l~~rt~~~g~~R~~ylq~LV~efq~t~---------------------------~~e~keqvlanLaNfAyDP~N~~~L 59 (178)
+--.+.|++++.++..|...+..+.... +..-|+.++.-|.+| |++..+|
T Consensus 25 ~~a~~~~~PA~~KlklL~~V~~~l~k~~l~~~~ld~giL~~l~~WL~PLpDgsLP~~~Ir~~lL~~L~~l---PI~~e~L 101 (145)
T 2xpp_A 25 NANNLEGRPATGKIENVEEISDILMSKALQESLLDEGILDEIKGWLEPLPDKSMPNIKIRKRLLDVLKTM---KIHKEHL 101 (145)
T ss_dssp HHHHHHTSCCCHHHHHHHHHHHHHTCTTTHHHHHHTTHHHHHHHHHSCCTTSCCCCHHHHHHHHHHHHTS---CCCHHHH
T ss_pred HHHHHcCChHHHHHhhHHHHHHHHhhHHHHHHHHHcCHHHHHHHHhCcCCCCCCCCHHHHHHHHHHHHHC---CCCHHHh
Confidence 3456889999999999998888776663 333466666666666 5666666
Q ss_pred hhcc
Q 030369 60 RQLN 63 (178)
Q Consensus 60 rqL~ 63 (178)
++-|
T Consensus 102 k~Sg 105 (145)
T 2xpp_A 102 VTSG 105 (145)
T ss_dssp HHHC
T ss_pred hcCC
Confidence 6643
No 130
>2jmh_A BLO T 5, mite allergen BLO T 5; DUST mites, group 5; NMR {Blomia tropicalis} PDB: 2jrk_A
Probab=25.09 E-value=47 Score=25.04 Aligned_cols=26 Identities=31% Similarity=0.561 Sum_probs=22.7
Q ss_pred hHHHHHHHHHHhhcCChHHHHHHHHH
Q 030369 19 RLQYLQELVSQFQNSTDEERKEKIVA 44 (178)
Q Consensus 19 R~~ylq~LV~efq~t~~~e~keqvla 44 (178)
.+=||++=|+|+-.|++.+.|+||+.
T Consensus 34 ~Ll~Ls~Qi~~LE~tKsKe~K~~Ilr 59 (119)
T 2jmh_A 34 QLLYLQHQLDELNENKSKELQEKIIR 59 (119)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 35579999999999999999999864
No 131
>1pbw_A Rhogap domain, phosphatidylinositol 3-kinase; phosphotransferase, tpase activating protein, CDC42, phosphoinositide 3-kinase, SH3 domain; 2.00A {Homo sapiens} SCOP: a.116.1.1
Probab=24.90 E-value=74 Score=24.92 Aligned_cols=13 Identities=15% Similarity=0.427 Sum_probs=7.5
Q ss_pred cChHHHHhhhcCC
Q 030369 63 NVLELFLDCITEP 75 (178)
Q Consensus 63 ~vidlfld~L~~~ 75 (178)
+++-.|+-.|-++
T Consensus 81 ~lLK~flReLPeP 93 (216)
T 1pbw_A 81 DAFKRYLLDLPNP 93 (216)
T ss_dssp HHHHHHHHTSSSC
T ss_pred HHHHHHHHhCCCC
Confidence 4555666666554
No 132
>2lm9_A BLO T 21 allergen; DUST mite; NMR {Blomia tropicalis}
Probab=24.81 E-value=30 Score=25.20 Aligned_cols=26 Identities=12% Similarity=0.303 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHhhcCChHHHHHHHHH
Q 030369 19 RLQYLQELVSQFQNSTDEERKEKIVA 44 (178)
Q Consensus 19 R~~ylq~LV~efq~t~~~e~keqvla 44 (178)
.+=||++=|+++-.|++.+.|+||+.
T Consensus 13 ~Ll~Ls~Qi~~LEktksK~~K~~Ilr 38 (96)
T 2lm9_A 13 FLLHITHEVDDLEKTGNKDEKARLLR 38 (96)
T ss_dssp HHHHHHHHHHHHHHHCCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHccCcHHHHHHHHH
Confidence 56689999999999999999999864
No 133
>3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi}
Probab=24.78 E-value=1.3e+02 Score=29.10 Aligned_cols=79 Identities=13% Similarity=0.246 Sum_probs=48.1
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhccCcccHHHhhhc-cChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchhhHHhh
Q 030369 23 LQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQL-NVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIIT 101 (178)
Q Consensus 23 lq~LV~efq~t~~~e~keqvlanLaNfAyDP~N~~~LrqL-~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~nk~~I~ 101 (178)
|..||. ....+.=|++.--+-.|--+ .+.+.++ +|++.++..|..+++.++.-|+.+|+-++ .|.....+
T Consensus 265 L~qLV~-~l~~~~WEVRHGGLLGLKYL------~DLL~~Ld~Vv~aVL~GL~D~DDDVRAVAAetLiPIA-~p~~l~~L- 335 (800)
T 3oc3_A 265 IEQLVG-FLDSGDWQVQFSGLIALGYL------KEFVEDKDGLCRKLVSLLSSPDEDIKLLSAELLCHFP-ITDSLDLV- 335 (800)
T ss_dssp HHHHTT-GGGCSCHHHHHHHHHHHHHT------GGGCCCHHHHHHHHHHHTTCSSHHHHHHHHHHHTTSC-CSSTHHHH-
T ss_pred HHHHHh-hcCCCCeeehhhhHHHHHHH------HHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHhhhhc-chhhHHHH-
Confidence 444442 33344556666666555544 3333333 57788888888888888888888888888 44333333
Q ss_pred hcCChhHHHHhhc
Q 030369 102 KSGGIPLIIECLS 114 (178)
Q Consensus 102 ~~gGi~~li~lLs 114 (178)
+..+-+||+
T Consensus 336 ----L~iLWd~L~ 344 (800)
T 3oc3_A 336 ----LEKCWKNIE 344 (800)
T ss_dssp ----HHHHHHHHH
T ss_pred ----HHHHHHHhh
Confidence 345566664
No 134
>3kuq_A RHO GTPase-activating protein 7; structural genomics consortium, GTPase activation, SGC, alternative splicing, cytoplasm, phosphoprotein; 2.30A {Homo sapiens}
Probab=24.42 E-value=54 Score=25.99 Aligned_cols=25 Identities=24% Similarity=0.219 Sum_probs=12.3
Q ss_pred HHHHHHHhhhhcccch-hHHHhHHHH
Q 030369 145 VVDVIRRYAAAESVNV-SFSNLAKAF 169 (178)
Q Consensus 145 ll~ll~~~~~~~~~~~-~~~nla~~f 169 (178)
++..|.+.+.+++.|+ ...|||.+|
T Consensus 149 L~~~L~~V~~~s~~NkM~~~NLAivf 174 (228)
T 3kuq_A 149 LLYFLSDVTAAVKENQMTPTNLAVCL 174 (228)
T ss_dssp HHHHHHHHHHTHHHHCCCHHHHHHHH
T ss_pred HHHHHHHHHHhccccCCchhHhHHHH
Confidence 3444444444333333 456666665
No 135
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=24.35 E-value=71 Score=30.50 Aligned_cols=37 Identities=16% Similarity=0.369 Sum_probs=31.5
Q ss_pred cHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCC
Q 030369 55 NYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD 93 (178)
Q Consensus 55 N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D 93 (178)
++.+|. .|++.+++.|.++++.++..|..++.++|-+
T Consensus 534 ~~~~l~--~vl~~ll~~l~~~~~~V~~~A~~al~~l~~~ 570 (1049)
T 3m1i_C 534 HWNFLR--TVILKLFEFMHETHEGVQDMACDTFIKIVQK 570 (1049)
T ss_dssp CHHHHH--HHHHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH--HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 455665 4788999999988999999999999999975
No 136
>4e17_B Catenin alpha-1; four helix bundle, cell adhesion; 2.30A {Mus musculus}
Probab=24.03 E-value=41 Score=20.82 Aligned_cols=14 Identities=36% Similarity=0.544 Sum_probs=11.2
Q ss_pred HHHHHHHHHHhhcC
Q 030369 20 LQYLQELVSQFQNS 33 (178)
Q Consensus 20 ~~ylq~LV~efq~t 33 (178)
+|=||.|++||...
T Consensus 25 rqALQdLlseY~~~ 38 (40)
T 4e17_B 25 RQALQDLLSEYMGN 38 (40)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhcc
Confidence 57799999999864
No 137
>2r17_C Vacuolar protein sorting-associated protein 35; protein transport, membrane, phosphorylation; 2.80A {Homo sapiens}
Probab=23.67 E-value=77 Score=27.05 Aligned_cols=51 Identities=12% Similarity=-0.003 Sum_probs=36.7
Q ss_pred hhhcCChhHHHHhhcCCchhHHHHHHHHHHHhcCC--cccccccchHHHHHHH
Q 030369 100 ITKSGGIPLIIECLSSPVRNTVNHALGALYYLCSM--STKEEILKPEVVDVIR 150 (178)
Q Consensus 100 I~~~gGi~~li~lLsS~~~evv~~AlttL~~L~~~--~sr~~I~~p~ll~ll~ 150 (178)
..|++-+..++.++.++|+++...=+.++-.-... ..|...+.|||+-+..
T Consensus 3 ~eeQ~~varliHli~~~d~d~~f~il~~~rk~~~~gg~~Ri~~TlPpLvf~~l 55 (298)
T 2r17_C 3 ADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAY 55 (298)
T ss_dssp TTTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTCSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCccceeecccHHHHHHH
Confidence 34556678899999999999988877777654433 3577777899875443
No 138
>1vdy_A Hypothetical protein (RAFL09-17-B18); structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} PDB: 2dcp_A
Probab=22.61 E-value=90 Score=23.72 Aligned_cols=66 Identities=17% Similarity=0.210 Sum_probs=45.7
Q ss_pred hhHHHHhhcCCchhHHHHHHHHHHHhcCCcc---ccccc-chHHHHHHHHhhhhc------ccchhHHHhHHHHHH
Q 030369 106 IPLIIECLSSPVRNTVNHALGALYYLCSMST---KEEIL-KPEVVDVIRRYAAAE------SVNVSFSNLAKAFLD 171 (178)
Q Consensus 106 i~~li~lLsS~~~evv~~AlttL~~L~~~~s---r~~I~-~p~ll~ll~~~~~~~------~~~~~~~nla~~fL~ 171 (178)
.+-|.+-|.++.+.++.-||+.|=|||.-.+ +.++. -..+|+-++.|+-.. +.+.++++.|+-.++
T Consensus 51 m~~L~kRL~~k~~~vk~KaL~lL~yL~~~Gs~~f~~~~r~~~~~Ik~l~~F~g~~dp~~G~d~g~~VR~~AkEl~~ 126 (140)
T 1vdy_A 51 SEFILKRLDNKSPIVKQKALRLIKYAVGKSGSEFRREMQRNSVAVRNLFHYKGHPDPLKGDALNKAVRETAHETIS 126 (140)
T ss_dssp HHHHHHHHTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHTTHHHHTTTTCCCCCCTTTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCcceeehHHHHHHHHHHhCCHHHHHHHHHhHHHHHHHHhcCCCCCcccccchhHHHHHHHHHHHH
Confidence 4567777777779999999999999995532 22222 366777777776532 344688888887664
No 139
>2kua_A BCL-2-like protein 10; BOO, DIVA, apoptosis, BH3-only, membrane, mitochondri nucleus, transmembrane; NMR {Mus musculus}
Probab=21.90 E-value=2.4e+02 Score=21.72 Aligned_cols=112 Identities=16% Similarity=0.136 Sum_probs=60.1
Q ss_pred HHHHHhhCCCCCC-------hHHHHHHHHHHhhcC----------ChHHHHHHHHHHhhh--hccC-cccHHHhhhccCh
Q 030369 6 QRQEERTGRSGTP-------RLQYLQELVSQFQNS----------TDEERKEKIVANLAN--FAYD-PYNYTFLRQLNVL 65 (178)
Q Consensus 6 ~~l~~rt~~~g~~-------R~~ylq~LV~efq~t----------~~~e~keqvlanLaN--fAyD-P~N~~~LrqL~vi 65 (178)
.++.-|.+++|++ -.+.|+.+.+|++.- +...+. .++...|+ |.-| .+||..+.-|=+.
T Consensus 23 dYi~y~l~~~g~~~~~~~s~~~~~Lr~v~~ele~~~~~~f~~~~~~~~~a~-~~f~~Va~elF~ddg~iNWGRIVaLfaF 101 (170)
T 2kua_A 23 DYIFFCAREPDTPEPPPTSVEAALLRSVTRQIQQEHQEFFSSFCESRGNRL-ELVKQMADKLLSKDQDFSWSQLVMLLAF 101 (170)
T ss_dssp HHHHHHHCCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCHH-HHHHHHHHHSCCSSSCCCHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhCCcchHH-HHHHHHHHHHhccCCCCCHHHHHHHHHH
Confidence 4566677666653 478899999988752 111122 23444444 4444 6788776654332
Q ss_pred HHHHhhh---------c-----CCcHHHHHHHHHHHHhhcCCchhhHHhhhcCChhHHHHhhcCCch
Q 030369 66 ELFLDCI---------T-----EPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVR 118 (178)
Q Consensus 66 dlfld~L---------~-----~~n~~l~EfAiggLcNL~~D~~nk~~I~~~gGi~~li~lLsS~~~ 118 (178)
--.|..= . +.-+.++.--+..++....+-..+.=|.++||=.-+++-...|++
T Consensus 102 ~g~La~~~~~~~~~~~~~~~~~~~~~~~v~~I~~~~~~yl~~~~~~~WI~~~GGW~gf~~~f~~~~~ 168 (170)
T 2kua_A 102 AGTLMNQGPYMAVKQKRDLGNRVIVTRDCCLIVNFLYNLLMGRRHRARLEALGGWDGFCRFFKNPLP 168 (170)
T ss_dssp HHHHCCCCCSCTTSCCSSCCSCTHHHHHHHHHHHHHHHHHSSHHHHHHHHHTTHHHHHHHHTTCSSS
T ss_pred HHHHHHhcchhhHHHHhhhcccccchHHHHHHHHHHHHHHhcccHHHHHHHcCCHHHHHHHhcCCCC
Confidence 2222111 0 001334444444444444433566677778887777777665544
No 140
>2noj_B EFB homologous protein; protein-protein complex, immune system; 2.70A {Staphylococcus aureus subsp} SCOP: a.7.17.1
Probab=21.89 E-value=60 Score=22.40 Aligned_cols=34 Identities=24% Similarity=0.266 Sum_probs=26.4
Q ss_pred HHHHHHHhhcCC--hHHHHHHHHHHhhhhccCcccH
Q 030369 23 LQELVSQFQNST--DEERKEKIVANLANFAYDPYNY 56 (178)
Q Consensus 23 lq~LV~efq~t~--~~e~keqvlanLaNfAyDP~N~ 56 (178)
-|.+|.||..|. +...|-|-.-||--|-|+-.-.
T Consensus 29 AQ~~V~~F~rT~TVs~HRKAQrAVNLi~F~~~~~K~ 64 (80)
T 2noj_B 29 AQKAVELFKRTRTVATHRKAQRAVNLIHFQHSYEKK 64 (80)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHCCCTTCHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 478999999885 5567888888999998864433
No 141
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=21.01 E-value=1.8e+02 Score=24.10 Aligned_cols=55 Identities=16% Similarity=0.188 Sum_probs=29.9
Q ss_pred hHHHHhhcCCchhHHHHHHHHHHHhcCC-cccccccc---hHHHHHHHHhhhhcccchhHHHhHH
Q 030369 107 PLIIECLSSPVRNTVNHALGALYYLCSM-STKEEILK---PEVVDVIRRYAAAESVNVSFSNLAK 167 (178)
Q Consensus 107 ~~li~lLsS~~~evv~~AlttL~~L~~~-~sr~~I~~---p~ll~ll~~~~~~~~~~~~~~nla~ 167 (178)
+.+.+.+.|.+.-+..-++..+-++++. ........ |.+.+++. +.+..++|.|-
T Consensus 170 ~~l~~g~ksKN~R~R~e~l~~l~~li~~~G~~~~~~l~~~~~ia~ll~------D~d~~VR~aAl 228 (266)
T 2of3_A 170 PMLLDALKSKNARQRSECLLVIEYYITNAGISPLKSLSVEKTVAPFVG------DKDVNVRNAAI 228 (266)
T ss_dssp HHHHHGGGCSCHHHHHHHHHHHHHHHHHHCSGGGGGGCHHHHHGGGGG------CSSHHHHHHHH
T ss_pred HHHHHHHccCCHHHHHHHHHHHHHHHHhcCCCccccccchHHHHHHHc------CCCHHHHHHHH
Confidence 3455666777777777777777776644 21122223 55554442 22455666663
No 142
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=20.56 E-value=1.2e+02 Score=28.36 Aligned_cols=128 Identities=9% Similarity=0.061 Sum_probs=0.0
Q ss_pred HHHHHHHHhhcCC----hHHHHHHHHHHhhhhc-cCcccHHHhhhccChHHHHhhhcCCcHHHHHHHHHHHHhhcCCchh
Q 030369 22 YLQELVSQFQNST----DEERKEKIVANLANFA-YDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPAN 96 (178)
Q Consensus 22 ylq~LV~efq~t~----~~e~keqvlanLaNfA-yDP~N~~~LrqL~vidlfld~L~~~n~~l~EfAiggLcNL~~D~~n 96 (178)
+|..++.-+..-. +.-.|..++-.|.-|+ +-..|..+|. .+++.++..|. +.+...|..++.++|-+-..
T Consensus 502 ~l~~l~~~l~~l~~~d~~~~vr~~a~~~l~~~~~~l~~~~~~l~--~vl~~l~~~l~---~~v~~~A~~al~~l~~~~~~ 576 (971)
T 2x1g_F 502 QIPRLMRVLAEIPYEKLNVKLLGTALETMGSYCNWLMENPAYIP--PAINLLVRGLN---SSMSAQATLGLKELCRDCQL 576 (971)
T ss_dssp HHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHTHHHHC----CHH--HHHHHHHHHHH---SSCHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHhcCccccCHHHHHHHHHHHHHHHHHHhcCHHHHH--HHHHHHHHHhC---hHHHHHHHHHHHHHHHHHHH
Q ss_pred hHHhhhcCChhHHHHhhcC--CchhHHHHHHHHHHHhcCCccccccc------chHHHHHHHHhhh
Q 030369 97 AAIITKSGGIPLIIECLSS--PVRNTVNHALGALYYLCSMSTKEEIL------KPEVVDVIRRYAA 154 (178)
Q Consensus 97 k~~I~~~gGi~~li~lLsS--~~~evv~~AlttL~~L~~~~sr~~I~------~p~ll~ll~~~~~ 154 (178)
.-.=.-.+=+..+.+++.+ -+.+.....++++..+.......++. .+|+++.++....
T Consensus 577 ~l~p~~~~ll~~l~~~l~~~~~~~~~~~~~~~ai~~i~~~~~~~~~~~~~~~ll~~l~~~l~~~~~ 642 (971)
T 2x1g_F 577 QLKPYADPLLNACHASLNTGRMKNSDSVRLMFSIGKLMSLLRPEEIPKYLDIIVSPCFEELQAICQ 642 (971)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hccccHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh
Done!