Your job contains 1 sequence.
>030370
MCTISIFPYWLIGFYLACWPVILVGRSLLGGLGNNLSGLSSTSHEMASGNFLSQQQRTFI
QMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGKVKKGQVVHAVVVR
AAMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLAEHLA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030370
(178 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2161368 - symbol:AT5G46160 species:3702 "Arabi... 418 3.7e-39 1
TAIR|locus:2007913 - symbol:HLL "HUELLENLOS" species:3702... 235 9.9e-31 2
TIGR_CMR|GSU_2847 - symbol:GSU_2847 "ribosomal protein L1... 261 1.6e-22 1
TIGR_CMR|SPO_0495 - symbol:SPO_0495 "ribosomal protein L1... 252 1.5e-21 1
TIGR_CMR|DET_0484 - symbol:DET_0484 "ribosomal protein L1... 246 6.3e-21 1
TIGR_CMR|CPS_0611 - symbol:CPS_0611 "ribosomal protein L1... 243 1.3e-20 1
UNIPROTKB|P66069 - symbol:rplN "50S ribosomal protein L14... 242 1.7e-20 1
UNIPROTKB|Q9KNZ4 - symbol:rplN "50S ribosomal protein L14... 235 9.2e-20 1
TIGR_CMR|VC_2586 - symbol:VC_2586 "ribosomal protein L14"... 235 9.2e-20 1
TIGR_CMR|CBU_0248 - symbol:CBU_0248 "ribosomal protein L1... 232 1.9e-19 1
UNIPROTKB|P0ADY3 - symbol:rplN "50S ribosomal subunit pro... 230 3.1e-19 1
TIGR_CMR|CHY_2299 - symbol:CHY_2299 "ribosomal protein L1... 229 4.0e-19 1
TIGR_CMR|CJE_1865 - symbol:CJE_1865 "ribosomal protein L1... 225 1.1e-18 1
TIGR_CMR|SO_0241 - symbol:SO_0241 "ribosomal protein L14"... 216 9.5e-18 1
TIGR_CMR|BA_0120 - symbol:BA_0120 "ribosomal protein L14"... 215 1.2e-17 1
TIGR_CMR|APH_0290 - symbol:APH_0290 "ribosomal protein L1... 213 2.0e-17 1
TIGR_CMR|ECH_0419 - symbol:ECH_0419 "ribosomal protein L1... 211 3.2e-17 1
UNIPROTKB|P0C438 - symbol:rpl14 "50S ribosomal protein L1... 206 1.1e-16 1
UNIPROTKB|P0C439 - symbol:rpl14 "50S ribosomal protein L1... 206 1.1e-16 1
UNIPROTKB|P0C440 - symbol:rpl14 "50S ribosomal protein L1... 206 1.1e-16 1
UNIPROTKB|Q6END7 - symbol:rpl14 "50S ribosomal protein L1... 206 1.1e-16 1
POMBASE|SPBC887.07 - symbol:mrpl38 "mitochondrial ribosom... 194 2.0e-15 1
TIGR_CMR|NSE_0276 - symbol:NSE_0276 "ribosomal protein L1... 192 3.3e-15 1
ASPGD|ASPL0000004926 - symbol:AN6146 species:162425 "Emer... 191 4.2e-15 1
CGD|CAL0000733 - symbol:orf19.5684 species:5476 "Candida ... 186 1.4e-14 1
SGD|S000001653 - symbol:MRPL38 "Mitochondrial ribosomal p... 134 4.7e-09 1
DICTYBASE|DDB_G0294066 - symbol:mrpl14 "ribosomal protein... 125 4.2e-08 1
UNIPROTKB|E1BY89 - symbol:RPL23 "Uncharacterized protein"... 121 1.1e-07 1
UNIPROTKB|Q3T057 - symbol:RPL23 "60S ribosomal protein L2... 118 2.3e-07 1
UNIPROTKB|F2Z4P3 - symbol:RPL23 "60S ribosomal protein L2... 118 2.3e-07 1
UNIPROTKB|Q9XSU3 - symbol:RPL23 "60S ribosomal protein L2... 118 2.3e-07 1
UNIPROTKB|P62829 - symbol:RPL23 "60S ribosomal protein L2... 118 2.3e-07 1
UNIPROTKB|P62831 - symbol:RPL23 "60S ribosomal protein L2... 118 2.3e-07 1
MGI|MGI:1929455 - symbol:Rpl23 "ribosomal protein L23" sp... 118 2.3e-07 1
RGD|62067 - symbol:Rpl23 "ribosomal protein L23" species:... 118 2.3e-07 1
WB|WBGene00004435 - symbol:rpl-23 species:6239 "Caenorhab... 118 2.3e-07 1
ZFIN|ZDB-GENE-030131-8756 - symbol:rpl23 "ribosomal prote... 116 3.8e-07 1
FB|FBgn0010078 - symbol:RpL23 "Ribosomal protein L23" spe... 114 6.1e-07 1
UNIPROTKB|J9P897 - symbol:J9P897 "Uncharacterized protein... 114 6.1e-07 1
UNIPROTKB|G3MY15 - symbol:G3MY15 "Uncharacterized protein... 110 1.6e-06 1
DICTYBASE|DDB_G0290315 - symbol:rpl23 "S60 ribosomal prot... 107 3.4e-06 1
POMBASE|SPAC3G9.03 - symbol:rpl2301 "60S ribosomal protei... 107 3.4e-06 1
POMBASE|SPCC1322.11 - symbol:rpl2302 "60S ribosomal prote... 107 3.4e-06 1
TAIR|locus:2018309 - symbol:AT1G04480 species:3702 "Arabi... 103 9.0e-06 1
TAIR|locus:2051119 - symbol:AT2G33370 species:3702 "Arabi... 103 9.0e-06 1
TAIR|locus:2100915 - symbol:emb2171 "embryo defective 217... 103 9.0e-06 1
ASPGD|ASPL0000077643 - symbol:AN4494 species:162425 "Emer... 101 1.5e-05 1
UNIPROTKB|J3KT29 - symbol:RPL23 "60S ribosomal protein L2... 101 1.5e-05 1
UNIPROTKB|Q6P1L8 - symbol:MRPL14 "39S ribosomal protein L... 101 2.1e-05 1
SGD|S000000183 - symbol:RPL23A "Ribosomal 60S subunit pro... 98 3.6e-05 1
SGD|S000000919 - symbol:RPL23B "Ribosomal 60S subunit pro... 98 3.6e-05 1
MGI|MGI:1333864 - symbol:Mrpl14 "mitochondrial ribosomal ... 99 5.7e-05 1
RGD|1306240 - symbol:Mrpl14 "mitochondrial ribosomal prot... 99 5.7e-05 1
RGD|2318559 - symbol:LOC100362226 "ribosomal protein L23-... 98 6.4e-05 1
UNIPROTKB|J9NW30 - symbol:MRPL14 "Uncharacterized protein... 97 0.00017 1
UNIPROTKB|Q1JQ99 - symbol:MRPL14 "39S ribosomal protein L... 95 0.00042 1
UNIPROTKB|F1RQV7 - symbol:MRPL14 "Uncharacterized protein... 95 0.00042 1
ZFIN|ZDB-GENE-040426-1066 - symbol:mrpl14 "mitochondrial ... 93 0.00069 1
UNIPROTKB|E1C7I2 - symbol:MRPL14 "Uncharacterized protein... 93 0.00094 1
>TAIR|locus:2161368 [details] [associations]
symbol:AT5G46160 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0000394
"RNA splicing, via endonucleolytic cleavage and ligation"
evidence=RCA] [GO:0006354 "DNA-dependent transcription, elongation"
evidence=RCA] [GO:0009086 "methionine biosynthetic process"
evidence=RCA] InterPro:IPR000218 InterPro:IPR005745
InterPro:IPR023571 Pfam:PF00238 EMBL:CP002688 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 Gene3D:2.40.150.20 HAMAP:MF_01367_B
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
TIGRFAMs:TIGR01067 PROSITE:PS00049 HOGENOM:HOG000183702 KO:K02874
PANTHER:PTHR11761:SF3 HSSP:P04450 OMA:KQFMKIV
ProtClustDB:CLSN2681916 EMBL:AY058844 EMBL:AF402993 IPI:IPI00545806
RefSeq:NP_851140.1 UniGene:At.26651 ProteinModelPortal:Q93Z17
SMR:Q93Z17 STRING:Q93Z17 PRIDE:Q93Z17 EnsemblPlants:AT5G46160.1
GeneID:834658 KEGG:ath:AT5G46160 TAIR:At5g46160 InParanoid:Q93Z17
PhylomeDB:Q93Z17 Genevestigator:Q93Z17 Uniprot:Q93Z17
Length = 173
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 92/142 (64%), Positives = 101/142 (71%)
Query: 46 MASGNFLSQQQ--RTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAM 103
M + + LSQQQ RTFIQM TVLKVVDNSGAK VMCIQ LKG+K ARLGDTIVASVKEAM
Sbjct: 32 MMNESILSQQQQRRTFIQMGTVLKVVDNSGAKKVMCIQALKGKKGARLGDTIVASVKEAM 91
Query: 104 PTGXXXXXXXXXXXXXXXXMQHGRFDGSEVRFDDNAVVLVNKAG-------EPTGTRVFG 156
P G MQ GR DGSEVRFDDNAVVLV+ +P GTRVFG
Sbjct: 92 PNGKVKKGAVVYGVVVRAAMQRGRVDGSEVRFDDNAVVLVDSKDKNTKTDRQPIGTRVFG 151
Query: 157 PVPHELRRKKHVSILTLAEHLA 178
PVPHELR+KKH+ IL LA+H+A
Sbjct: 152 PVPHELRKKKHLKILALAQHVA 173
>TAIR|locus:2007913 [details] [associations]
symbol:HLL "HUELLENLOS" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006354 "DNA-dependent transcription, elongation"
evidence=RCA] InterPro:IPR000218 InterPro:IPR005745
InterPro:IPR023571 Pfam:PF00238 EMBL:CP002684 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093
KO:K02874 PANTHER:PTHR11761:SF3 HSSP:P04450 EMBL:BT004292
EMBL:BT005522 IPI:IPI00545916 RefSeq:NP_173200.1 UniGene:At.41826
ProteinModelPortal:Q84JG5 SMR:Q84JG5 STRING:Q84JG5 PaxDb:Q84JG5
PRIDE:Q84JG5 EnsemblPlants:AT1G17560.1 GeneID:838332
KEGG:ath:AT1G17560 OMA:SSSNGMM ProtClustDB:CLSN2681916
ArrayExpress:Q84JG5 Genevestigator:Q84JG5 Uniprot:Q84JG5
Length = 196
Score = 235 (87.8 bits), Expect = 9.9e-31, Sum P(2) = 9.9e-31
Identities = 58/111 (52%), Positives = 68/111 (61%)
Query: 46 MASGNFLSQQQ-RTFIQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEA-- 102
M +G+ LSQQQ RTFIQM T+LK VDNS AK VMCIQ L+G+K ARLGD IV SVKEA
Sbjct: 34 MMNGSILSQQQHRTFIQMGTILKCVDNSCAKEVMCIQSLRGKKGARLGDIIVGSVKEANP 93
Query: 103 ----------MPTGXXXXXXXXXXXXXXXXMQHGRFDGSEVRFDDNAVVLV 143
+P G M GR DGS+V+FDDNA+V+V
Sbjct: 94 IVQKKVKKDAIPKGKVKKGMVVYGVVVRAAMPKGRADGSQVKFDDNAIVVV 144
Score = 119 (46.9 bits), Expect = 9.9e-31, Sum P(2) = 9.9e-31
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 148 EPTGTRVFGPVPHELRRKKHVSILTLAEHL 177
+PTGTRVFGPVPHE+R +K + IL+LA+H+
Sbjct: 166 QPTGTRVFGPVPHEMRLRKQLKILSLAQHI 195
>TIGR_CMR|GSU_2847 [details] [associations]
symbol:GSU_2847 "ribosomal protein L14" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000218
InterPro:IPR005745 InterPro:IPR023571 Pfam:PF00238 GO:GO:0006412
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0019843
GO:GO:0015934 Gene3D:2.40.150.20 HAMAP:MF_01367_B PANTHER:PTHR11761
SUPFAM:SSF50193 TIGRFAMs:TIGR01067 PROSITE:PS00049
HOGENOM:HOG000183702 eggNOG:COG0093 KO:K02874 ProtClustDB:PRK05483
PANTHER:PTHR11761:SF3 HSSP:P04450 OMA:KQFMKIV RefSeq:NP_953890.1
ProteinModelPortal:Q748Z8 SMR:Q748Z8 GeneID:2687151
KEGG:gsu:GSU2847 PATRIC:22028541
BioCyc:GSUL243231:GH27-2813-MONOMER Uniprot:Q748Z8
Length = 122
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 56/117 (47%), Positives = 73/117 (62%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGXXXXXXXXXXX 117
IQM+TVL V DNSGAK + CI+ L G RK A +GD +V SV+EA+P
Sbjct: 2 IQMQTVLDVADNSGAKKLFCIKVLGGSKRKYAGVGDIVVCSVREAVPNAKVKKGDVVKVV 61
Query: 118 XXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLA 174
+ GR DGS +RFDDN+ V++N EP GTR+FGPV ELR +K + I++LA
Sbjct: 62 IVRTAKEIGRPDGSYIRFDDNSGVVINNQREPVGTRIFGPVARELRAQKFMKIISLA 118
>TIGR_CMR|SPO_0495 [details] [associations]
symbol:SPO_0495 "ribosomal protein L14" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 GO:GO:0015934 Gene3D:2.40.150.20
HAMAP:MF_01367_B InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 TIGRFAMs:TIGR01067 PROSITE:PS00049
HOGENOM:HOG000183702 eggNOG:COG0093 KO:K02874 ProtClustDB:PRK05483
PANTHER:PTHR11761:SF3 HSSP:P04450 OMA:KQFMKIV RefSeq:YP_165757.1
ProteinModelPortal:Q5LW48 SMR:Q5LW48 GeneID:3195401
KEGG:sil:SPO0495 PATRIC:23374251 Uniprot:Q5LW48
Length = 122
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 56/117 (47%), Positives = 70/117 (59%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGXXXXXXXXXXX 117
IQM+T L V DNSGA+ V CI+ L G RK A +GD IV SVKEA+P G
Sbjct: 2 IQMQTNLDVADNSGARRVQCIKVLGGSKRKYASVGDIIVVSVKEAIPRGRVKKGDVRKAV 61
Query: 118 XXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLA 174
+ R DG+ +RFD NA V++N EP GTR+FGPV ELR K + I++LA
Sbjct: 62 VVRTAKEVRREDGTAIRFDRNAAVILNNNNEPVGTRIFGPVVRELRAKNFMKIISLA 118
>TIGR_CMR|DET_0484 [details] [associations]
symbol:DET_0484 "ribosomal protein L14" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 GO:GO:0003735 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0019843 GO:GO:0015934
Gene3D:2.40.150.20 HAMAP:MF_01367_B InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 TIGRFAMs:TIGR01067
PROSITE:PS00049 HOGENOM:HOG000183702 eggNOG:COG0093 KO:K02874
ProtClustDB:PRK05483 PANTHER:PTHR11761:SF3 OMA:KQFMKIV
RefSeq:YP_181228.1 ProteinModelPortal:Q3Z971 SMR:Q3Z971
STRING:Q3Z971 PRIDE:Q3Z971 GeneID:3230137 KEGG:det:DET0484
PATRIC:21608037 BioCyc:DETH243164:GJNF-484-MONOMER Uniprot:Q3Z971
Length = 122
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 54/117 (46%), Positives = 70/117 (59%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPLKG-RKV-ARLGDTIVASVKEAMPTGXXXXXXXXXXX 117
+Q T L V DN+GAK +MCI L G RK+ A++GD IVA+VK++ P
Sbjct: 2 VQQYTRLNVADNTGAKKIMCINVLGGSRKLQAKVGDVIVAAVKKSSPDAQAKSGTVVKAV 61
Query: 118 XXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLA 174
+ R DGS ++FDDNA V++N EP GTR+FGPV ELR KK IL+LA
Sbjct: 62 VVRITKPYARPDGSYIKFDDNAAVILNDKMEPKGTRIFGPVARELRDKKFTKILSLA 118
>TIGR_CMR|CPS_0611 [details] [associations]
symbol:CPS_0611 "ribosomal protein L14" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0003735 GO:GO:0019843 GO:GO:0015934 Gene3D:2.40.150.20
HAMAP:MF_01367_B PANTHER:PTHR11761 SUPFAM:SSF50193
TIGRFAMs:TIGR01067 PROSITE:PS00049 HOGENOM:HOG000183702
eggNOG:COG0093 KO:K02874 PANTHER:PTHR11761:SF3 OMA:KQFMKIV
RefSeq:YP_267361.1 ProteinModelPortal:Q489A3 SMR:Q489A3
STRING:Q489A3 PRIDE:Q489A3 GeneID:3522240 KEGG:cps:CPS_0611
PATRIC:21464549 BioCyc:CPSY167879:GI48-698-MONOMER Uniprot:Q489A3
Length = 122
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 54/117 (46%), Positives = 70/117 (59%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGXXXXXXXXXXX 117
IQM++ L V DNSGAK V CI+ L G R+ AR+GD I +VKEA P G
Sbjct: 2 IQMQSQLNVADNSGAKRVQCIKVLGGSHRRYARIGDIIKVAVKEASPRGKVKKGDVHTAV 61
Query: 118 XXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLA 174
R DGS +RFD+NA V++N +P GTR+FGPV ELR +K + I++LA
Sbjct: 62 VVRTKKGVRRTDGSAIRFDENAAVMLNANLQPIGTRIFGPVTRELRNEKFMKIVSLA 118
>UNIPROTKB|P66069 [details] [associations]
symbol:rplN "50S ribosomal protein L14" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR000218
InterPro:IPR005745 InterPro:IPR023571 Pfam:PF00238 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 EMBL:BX842574 GO:GO:0003735
GO:GO:0019843 GO:GO:0015934 Gene3D:2.40.150.20 HAMAP:MF_01367_B
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
TIGRFAMs:TIGR01067 PROSITE:PS00049 HOGENOM:HOG000183702
eggNOG:COG0093 KO:K02874 ProtClustDB:PRK05483 OMA:KQFMKIV
PIR:E70643 RefSeq:NP_215228.1 RefSeq:NP_335159.1
RefSeq:YP_006514058.1 ProteinModelPortal:P66069 SMR:P66069
PRIDE:P66069 EnsemblBacteria:EBMYCT00000003180
EnsemblBacteria:EBMYCT00000070549 GeneID:13318603 GeneID:888411
GeneID:926032 KEGG:mtc:MT0741 KEGG:mtu:Rv0714 KEGG:mtv:RVBD_0714
PATRIC:18123361 TubercuList:Rv0714 Uniprot:P66069
Length = 122
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 50/117 (42%), Positives = 72/117 (61%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGXXXXXXXXXXX 117
IQ + LKV DN+GAK ++CI+ L G R+ A +GD IVA+VK+A+P G
Sbjct: 2 IQQESRLKVADNTGAKEILCIRVLGGSSRRYAGIGDVIVATVKDAIPGGNVKRGDVVKAV 61
Query: 118 XXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLA 174
+ R DGS ++FD+NA V++ +P GTR+FGPV ELR K+ + I++LA
Sbjct: 62 VVRTVKERRRPDGSYIKFDENAAVIIKPDNDPRGTRIFGPVGRELREKRFMKIISLA 118
>UNIPROTKB|Q9KNZ4 [details] [associations]
symbol:rplN "50S ribosomal protein L14" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000218 InterPro:IPR005745
InterPro:IPR023571 Pfam:PF00238 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003735 GO:GO:0019843 GO:GO:0015934
Gene3D:2.40.150.20 HAMAP:MF_01367_B InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 TIGRFAMs:TIGR01067
PROSITE:PS00049 eggNOG:COG0093 KO:K02874 ProtClustDB:PRK05483
PANTHER:PTHR11761:SF3 HSSP:P04450 OMA:KQFMKIV PIR:D82058
RefSeq:NP_232214.1 ProteinModelPortal:Q9KNZ4 SMR:Q9KNZ4
PRIDE:Q9KNZ4 DNASU:2615603 GeneID:2615603 KEGG:vch:VC2586
PATRIC:20084198 Uniprot:Q9KNZ4
Length = 123
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 55/118 (46%), Positives = 70/118 (59%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGXXXXXXXXXXX 117
IQM+T+L DNSGA++VMCI+ L G R+ A +GD I +VKEA+P G
Sbjct: 2 IQMQTMLDAADNSGARSVMCIKVLGGSHRRYAHVGDIIKVTVKEAIPRGKVKKGDVLKAV 61
Query: 118 XXXXXMQHGRFDGSEVRFDDNAVVLVNKAGE-PTGTRVFGPVPHELRRKKHVSILTLA 174
R DGS +RFD NA VL+N E P GTR+FGPV ELR K + I++LA
Sbjct: 62 VVRTRKGVRRPDGSVIRFDRNACVLLNNNSEQPIGTRIFGPVTRELRNAKFMKIVSLA 119
>TIGR_CMR|VC_2586 [details] [associations]
symbol:VC_2586 "ribosomal protein L14" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003735 GO:GO:0019843 GO:GO:0015934 Gene3D:2.40.150.20
HAMAP:MF_01367_B InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 TIGRFAMs:TIGR01067 PROSITE:PS00049 eggNOG:COG0093
KO:K02874 ProtClustDB:PRK05483 PANTHER:PTHR11761:SF3 HSSP:P04450
OMA:KQFMKIV PIR:D82058 RefSeq:NP_232214.1 ProteinModelPortal:Q9KNZ4
SMR:Q9KNZ4 PRIDE:Q9KNZ4 DNASU:2615603 GeneID:2615603
KEGG:vch:VC2586 PATRIC:20084198 Uniprot:Q9KNZ4
Length = 123
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 55/118 (46%), Positives = 70/118 (59%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGXXXXXXXXXXX 117
IQM+T+L DNSGA++VMCI+ L G R+ A +GD I +VKEA+P G
Sbjct: 2 IQMQTMLDAADNSGARSVMCIKVLGGSHRRYAHVGDIIKVTVKEAIPRGKVKKGDVLKAV 61
Query: 118 XXXXXMQHGRFDGSEVRFDDNAVVLVNKAGE-PTGTRVFGPVPHELRRKKHVSILTLA 174
R DGS +RFD NA VL+N E P GTR+FGPV ELR K + I++LA
Sbjct: 62 VVRTRKGVRRPDGSVIRFDRNACVLLNNNSEQPIGTRIFGPVTRELRNAKFMKIVSLA 119
>TIGR_CMR|CBU_0248 [details] [associations]
symbol:CBU_0248 "ribosomal protein L14" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR000218 InterPro:IPR005745
InterPro:IPR023571 Pfam:PF00238 GO:GO:0006412 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0003735 GO:GO:0019843 GO:GO:0015934
Gene3D:2.40.150.20 HAMAP:MF_01367_B InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 TIGRFAMs:TIGR01067
PROSITE:PS00049 HOGENOM:HOG000183702 eggNOG:COG0093 KO:K02874
ProtClustDB:PRK05483 PANTHER:PTHR11761:SF3 HSSP:P04450 OMA:KQFMKIV
RefSeq:NP_819292.1 ProteinModelPortal:Q83ER6 SMR:Q83ER6
GeneID:1208129 KEGG:cbu:CBU_0248 PATRIC:17929189
BioCyc:CBUR227377:GJ7S-254-MONOMER Uniprot:Q83ER6
Length = 122
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 53/117 (45%), Positives = 70/117 (59%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGXXXXXXXXXXX 117
IQ ++++ V DNSGA+ VMCI+ L G R+ A +GD I S+KEA+P G
Sbjct: 2 IQTQSIVDVADNSGARRVMCIKVLGGSKRRYANIGDVIKVSIKEAIPRGKVKKGDVMHAV 61
Query: 118 XXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLA 174
R DGS +RFD+NAVVL+N + GTRVFGPV ELR K + I++LA
Sbjct: 62 VVRTRKGVRRNDGSLIRFDNNAVVLLNNQLQLVGTRVFGPVVRELRTDKFMKIISLA 118
>UNIPROTKB|P0ADY3 [details] [associations]
symbol:rplN "50S ribosomal subunit protein L14"
species:83333 "Escherichia coli K-12" [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0070180 "LSU rRNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=IDA] InterPro:IPR000218
InterPro:IPR005745 InterPro:IPR023571 Pfam:PF00238 EMBL:X01563
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 EMBL:U18997 GO:GO:0003735
GO:GO:0019843 GO:GO:0015934 PDB:2RDO PDBsum:2RDO Gene3D:2.40.150.20
HAMAP:MF_01367_B InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 TIGRFAMs:TIGR01067 PROSITE:PS00049
HOGENOM:HOG000183702 eggNOG:COG0093 KO:K02874 PDB:3J0T PDB:3J0W
PDB:3J0Y PDB:3J11 PDB:3J12 PDB:3J14 PDB:3SGF PDB:3UOS PDBsum:3J0T
PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11 PDBsum:3J12 PDBsum:3J14
PDBsum:3SGF PDBsum:3UOS PDB:1P85 PDB:1P86 PDB:1VS6 PDB:1VS8
PDB:1VT2 PDB:2AW4 PDB:2AWB PDB:2GYA PDB:2GYC PDB:2I2T PDB:2I2V
PDB:2J28 PDB:2QAM PDB:2QAO PDB:2QBA PDB:2QBC PDB:2QBE PDB:2QBG
PDB:2QBI PDB:2QBK PDB:2QOV PDB:2QOX PDB:2QOZ PDB:2QP1 PDB:2WWQ
PDB:2Z4L PDB:2Z4N PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P
PDB:3I1R PDB:3I1T PDB:3I20 PDB:3I22 PDB:3IZT PDB:3IZU PDB:3J01
PDB:3J19 PDB:3KCR PDB:3OAS PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ
PDB:3OFR PDB:3OFZ PDB:3OG0 PDB:3ORB PDB:3R8S PDB:3R8T PDB:487D
PDB:4GAR PDB:4GAU PDBsum:1P85 PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8
PDBsum:1VT2 PDBsum:2AW4 PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC
PDBsum:2I2T PDBsum:2I2V PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO
PDBsum:2QBA PDBsum:2QBC PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI
PDBsum:2QBK PDBsum:2QOV PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1
PDBsum:2WWQ PDBsum:2Z4L PDBsum:2Z4N PDBsum:3E1B PDBsum:3E1D
PDBsum:3FIK PDBsum:3I1N PDBsum:3I1P PDBsum:3I1R PDBsum:3I1T
PDBsum:3I20 PDBsum:3I22 PDBsum:3IZT PDBsum:3IZU PDBsum:3J01
PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS PDBsum:3OAT PDBsum:3OFC
PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR PDBsum:3OFZ PDBsum:3OG0
PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T PDBsum:487D PDBsum:4GAR
PDBsum:4GAU PDB:3BBX PDBsum:3BBX ProtClustDB:PRK05483
PANTHER:PTHR11761:SF3 OMA:KQFMKIV EMBL:V00357 PIR:A65124
RefSeq:NP_417769.1 RefSeq:YP_492122.1 ProteinModelPortal:P0ADY3
SMR:P0ADY3 DIP:DIP-35798N IntAct:P0ADY3 MINT:MINT-1304553
PaxDb:P0ADY3 PRIDE:P0ADY3 EnsemblBacteria:EBESCT00000001428
EnsemblBacteria:EBESCT00000014678 GeneID:12934392 GeneID:947809
KEGG:ecj:Y75_p3866 KEGG:eco:b3310 PATRIC:32122052 EchoBASE:EB0868
EcoGene:EG10875 BioCyc:EcoCyc:EG10875-MONOMER
BioCyc:ECOL316407:JW3272-MONOMER EvolutionaryTrace:P0ADY3
Genevestigator:P0ADY3 Uniprot:P0ADY3
Length = 123
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 54/118 (45%), Positives = 70/118 (59%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGXXXXXXXXXXX 117
IQ +T+L V DNSGA+ VMCI+ L G R+ A +GD I ++KEA+P G
Sbjct: 2 IQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKAV 61
Query: 118 XXXXXMQHGRFDGSEVRFDDNAVVLVNKAGE-PTGTRVFGPVPHELRRKKHVSILTLA 174
R DGS +RFD NA VL+N E P GTR+FGPV ELR +K + I++LA
Sbjct: 62 VVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLA 119
>TIGR_CMR|CHY_2299 [details] [associations]
symbol:CHY_2299 "ribosomal protein L14" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000218 InterPro:IPR005745
InterPro:IPR023571 Pfam:PF00238 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0015934 Gene3D:2.40.150.20 HAMAP:MF_01367_B
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
TIGRFAMs:TIGR01067 PROSITE:PS00049 HOGENOM:HOG000183702
eggNOG:COG0093 KO:K02874 ProtClustDB:PRK05483 OMA:KQFMKIV
RefSeq:YP_361108.1 ProteinModelPortal:Q3A9S6 SMR:Q3A9S6
STRING:Q3A9S6 GeneID:3727104 KEGG:chy:CHY_2299 PATRIC:21277669
BioCyc:CHYD246194:GJCN-2298-MONOMER Uniprot:Q3A9S6
Length = 122
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 50/117 (42%), Positives = 68/117 (58%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGXXXXXXXXXXX 117
IQ++T+L DN+GAK +MCI+ L G R+ A LGD IV SVKEA P
Sbjct: 2 IQVQTILNSADNTGAKKLMCIRVLGGSNRRYASLGDIIVCSVKEATPDAVVKKGEVVKAV 61
Query: 118 XXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLA 174
+ R DG+ ++FD+NA V++ P GTR+FGPV ELR K + I++LA
Sbjct: 62 VVRTKKEVRRPDGTYIKFDENAAVIIKDDKSPRGTRIFGPVARELREKDFMKIISLA 118
>TIGR_CMR|CJE_1865 [details] [associations]
symbol:CJE_1865 "ribosomal protein L14" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000218 InterPro:IPR005745
InterPro:IPR023571 Pfam:PF00238 GO:GO:0006412 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0019843 GO:GO:0015934
Gene3D:2.40.150.20 HAMAP:MF_01367_B InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 TIGRFAMs:TIGR01067
PROSITE:PS00049 HOGENOM:HOG000183702 eggNOG:COG0093 KO:K02874
ProtClustDB:PRK05483 PANTHER:PTHR11761:SF3 HSSP:P04450 OMA:KQFMKIV
PIR:E81267 RefSeq:YP_179835.1 ProteinModelPortal:Q5HSA0 SMR:Q5HSA0
STRING:Q5HSA0 GeneID:3232492 KEGG:cjr:CJE1865 PATRIC:20045562
BioCyc:CJEJ195099:GJC0-1904-MONOMER Uniprot:Q5HSA0
Length = 122
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 52/117 (44%), Positives = 70/117 (59%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGXXXXXXXXXXX 117
IQ T L V DNSGAK +MCI+ L G R+ A +GD IVASVK+A+P G
Sbjct: 2 IQSFTRLAVADNSGAKELMCIKVLGGSKRRYATVGDVIVASVKKALPNGKVKKGQVVKAV 61
Query: 118 XXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLA 174
+ R +GS +RFD+NA V+++ EP GTR+FGPV E+R + I++LA
Sbjct: 62 IVRTKKEIHRDNGSLIRFDENAAVILDNKREPIGTRIFGPVGREVRYGGFMKIVSLA 118
>TIGR_CMR|SO_0241 [details] [associations]
symbol:SO_0241 "ribosomal protein L14" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0003735 GO:GO:0019843 GO:GO:0015934 Gene3D:2.40.150.20
HAMAP:MF_01367_B InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 TIGRFAMs:TIGR01067 PROSITE:PS00049
HOGENOM:HOG000183702 eggNOG:COG0093 KO:K02874 ProtClustDB:PRK05483
PANTHER:PTHR11761:SF3 HSSP:P04450 OMA:KQFMKIV RefSeq:NP_715881.1
ProteinModelPortal:Q8EK59 SMR:Q8EK59 GeneID:1168124
KEGG:son:SO_0241 PATRIC:23520175 Uniprot:Q8EK59
Length = 122
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 51/117 (43%), Positives = 67/117 (57%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGXXXXXXXXXXX 117
IQM++ L V NSGA+ V CI+ L G R+ A +GD I SVKEA+P
Sbjct: 2 IQMQSTLDVACNSGARRVQCIKVLGGSHRRYAGIGDIIKVSVKEAIPRAKAKKGDVYNAV 61
Query: 118 XXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLA 174
R DGS +RFD NA VL+N +P GTR+FGPV ELR ++ + I++LA
Sbjct: 62 VVRTKKGVRRPDGSVIRFDRNAAVLLNNNLQPIGTRIFGPVTRELRNEQFMKIVSLA 118
>TIGR_CMR|BA_0120 [details] [associations]
symbol:BA_0120 "ribosomal protein L14" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0015934 Gene3D:2.40.150.20 HAMAP:MF_01367_B
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
TIGRFAMs:TIGR01067 PROSITE:PS00049 HOGENOM:HOG000183702
eggNOG:COG0093 KO:K02874 ProtClustDB:PRK05483 RefSeq:NP_842688.1
RefSeq:YP_016725.1 RefSeq:YP_026406.1 HSSP:P04450
ProteinModelPortal:Q81VS0 SMR:Q81VS0 DNASU:1087270
EnsemblBacteria:EBBACT00000013244 EnsemblBacteria:EBBACT00000013820
EnsemblBacteria:EBBACT00000023430 GeneID:1087270 GeneID:2819213
GeneID:2852443 KEGG:ban:BA_0120 KEGG:bar:GBAA_0120 KEGG:bat:BAS0120
OMA:KQFMKIV BioCyc:BANT260799:GJAJ-131-MONOMER
BioCyc:BANT261594:GJ7F-133-MONOMER Uniprot:Q81VS0
Length = 122
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 49/117 (41%), Positives = 66/117 (56%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPL--KGRKVARLGDTIVASVKEAMPTGXXXXXXXXXXX 117
IQ + LKV DNSGA+ ++ I+ L GRK A +GD IVA+VK+A P G
Sbjct: 2 IQQESRLKVADNSGARELLTIKVLGGSGRKYANIGDIIVATVKQATPGGVVKKGDVVKAV 61
Query: 118 XXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLA 174
R DGS ++FD+NA V++ P GTR+FGPV ELR + I++LA
Sbjct: 62 VVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARELRDSNFMKIVSLA 118
>TIGR_CMR|APH_0290 [details] [associations]
symbol:APH_0290 "ribosomal protein L14" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 GO:GO:0003735 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0019843 GO:GO:0015934
Gene3D:2.40.150.20 HAMAP:MF_01367_B InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 TIGRFAMs:TIGR01067
PROSITE:PS00049 HOGENOM:HOG000183702 eggNOG:COG0093 KO:K02874
OMA:MPVKKSD RefSeq:YP_504902.1 ProteinModelPortal:Q2GL49 SMR:Q2GL49
STRING:Q2GL49 GeneID:3930314 KEGG:aph:APH_0290 PATRIC:20949154
ProtClustDB:PRK05483 BioCyc:APHA212042:GHPM-320-MONOMER
PANTHER:PTHR11761:SF3 Uniprot:Q2GL49
Length = 119
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 48/99 (48%), Positives = 55/99 (55%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGXXXXXXXXXXXXX 119
IQ +L V DNSGA+ V+CI L G+K A +GD IV S K A P G
Sbjct: 2 IQKNAILDVADNSGARKVLCIGFLGGKKSATVGDVIVVSAKVAAPKGRVTKGKVYKAVIV 61
Query: 120 XXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPV 158
R DGS +RF NAVVLVN G+P GTRVFGPV
Sbjct: 62 RVKGPIRRLDGSIIRFSSNAVVLVNDQGDPLGTRVFGPV 100
>TIGR_CMR|ECH_0419 [details] [associations]
symbol:ECH_0419 "ribosomal protein L14" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 GO:GO:0015934 Gene3D:2.40.150.20
HAMAP:MF_01367_B InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 TIGRFAMs:TIGR01067 PROSITE:PS00049
HOGENOM:HOG000183702 eggNOG:COG0093 KO:K02874 OMA:MPVKKSD
ProtClustDB:PRK05483 PANTHER:PTHR11761:SF3 RefSeq:YP_507237.1
ProteinModelPortal:Q2GH46 SMR:Q2GH46 STRING:Q2GH46 GeneID:3927770
KEGG:ech:ECH_0419 PATRIC:20576315
BioCyc:ECHA205920:GJNR-420-MONOMER Uniprot:Q2GH46
Length = 119
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 45/99 (45%), Positives = 55/99 (55%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGXXXXXXXXXXXXX 119
IQ T+L V DNSGA+ V+CI L G+K A +GD IV S K P G
Sbjct: 2 IQKNTLLDVADNSGARKVLCIGLLNGKKSASVGDVIVVSTKLITPRGKVSKGKVYKAVIV 61
Query: 120 XXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPV 158
R DGS ++F NAVVL+N G+P GTRVFGP+
Sbjct: 62 RVKKAVRRLDGSVIKFSSNAVVLINDQGDPLGTRVFGPI 100
>UNIPROTKB|P0C438 [details] [associations]
symbol:rpl14 "50S ribosomal protein L14, chloroplastic"
species:4530 "Oryza sativa" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 GO:GO:0009507 GO:GO:0009536 GO:GO:0006412
EMBL:AY522331 GO:GO:0003735 GO:GO:0019843 GO:GO:0015934
Gene3D:2.40.150.20 HAMAP:MF_01367_B InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 TIGRFAMs:TIGR01067
PROSITE:PS00049 ProteinModelPortal:P0C438 SMR:P0C438 PRIDE:P0C438
Gramene:P0C438 HOGENOM:HOG000183702 Genevestigator:P0C438
Uniprot:P0C438
Length = 123
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 45/118 (38%), Positives = 67/118 (56%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPL---KGRKVARLGDTIVASVKEAMPTGXXXXXXXXXX 116
IQ +T+L V DNSGA+ +MCI+ + ++ AR+GD IVA +K+A+P
Sbjct: 2 IQPQTLLNVADNSGARKLMCIRVIGAASNQRYARIGDVIVAVIKDAVPQMPLERSEVIRA 61
Query: 117 XXXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLA 174
+ DG +R+DDNA V++++ G P GTRVFG + ELR I++LA
Sbjct: 62 VIVRTCKEFKCEDGIIIRYDDNAAVIIDQKGNPKGTRVFGAIAEELRELNFTKIVSLA 119
>UNIPROTKB|P0C439 [details] [associations]
symbol:rpl14 "50S ribosomal protein L14, chloroplastic"
species:39946 "Oryza sativa Indica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR000218 InterPro:IPR005745
InterPro:IPR023571 Pfam:PF00238 GO:GO:0009507 GO:GO:0009536
GO:GO:0006412 EMBL:AY522329 GO:GO:0003735 GO:GO:0019843
GO:GO:0015934 ProtClustDB:CHL00057 Gene3D:2.40.150.20
HAMAP:MF_01367_B InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 TIGRFAMs:TIGR01067 PROSITE:PS00049
RefSeq:YP_654240.1 ProteinModelPortal:P0C439 SMR:P0C439
PRIDE:P0C439 GeneID:4126930 Gramene:P0C439 Uniprot:P0C439
Length = 123
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 45/118 (38%), Positives = 67/118 (56%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPL---KGRKVARLGDTIVASVKEAMPTGXXXXXXXXXX 116
IQ +T+L V DNSGA+ +MCI+ + ++ AR+GD IVA +K+A+P
Sbjct: 2 IQPQTLLNVADNSGARKLMCIRVIGAASNQRYARIGDVIVAVIKDAVPQMPLERSEVIRA 61
Query: 117 XXXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLA 174
+ DG +R+DDNA V++++ G P GTRVFG + ELR I++LA
Sbjct: 62 VIVRTCKEFKCEDGIIIRYDDNAAVIIDQKGNPKGTRVFGAIAEELRELNFTKIVSLA 119
>UNIPROTKB|P0C440 [details] [associations]
symbol:rpl14 "50S ribosomal protein L14, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR000218 InterPro:IPR005745
InterPro:IPR023571 Pfam:PF00238 GO:GO:0009507 GO:GO:0009536
GO:GO:0006412 EMBL:X15901 EMBL:AY522330 GO:GO:0003735 GO:GO:0019843
GO:GO:0015934 ProtClustDB:CHL00057 Gene3D:2.40.150.20
HAMAP:MF_01367_B InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 TIGRFAMs:TIGR01067 PROSITE:PS00049 PIR:JQ0263
RefSeq:NP_001174324.1 RefSeq:NP_039422.1 UniGene:Os.100227
ProteinModelPortal:P0C440 SMR:P0C440 STRING:P0C440
EnsemblPlants:LOC_Os01g57956.1 EnsemblPlants:LOC_Os04g16828.1
EnsemblPlants:LOC_Os05g22722.1 EnsemblPlants:LOC_Os08g15276.1
EnsemblPlants:LOC_Os10g21342.1 EnsemblPlants:LOC_Osp1g00710.1
GeneID:3131422 GeneID:9272666 KEGG:osa:3131422 KEGG:osa:9272666
Gramene:P0C440 eggNOG:COG0093 KO:K02874 OMA:MPVKKSD Uniprot:P0C440
Length = 123
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 45/118 (38%), Positives = 67/118 (56%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPL---KGRKVARLGDTIVASVKEAMPTGXXXXXXXXXX 116
IQ +T+L V DNSGA+ +MCI+ + ++ AR+GD IVA +K+A+P
Sbjct: 2 IQPQTLLNVADNSGARKLMCIRVIGAASNQRYARIGDVIVAVIKDAVPQMPLERSEVIRA 61
Query: 117 XXXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLA 174
+ DG +R+DDNA V++++ G P GTRVFG + ELR I++LA
Sbjct: 62 VIVRTCKEFKCEDGIIIRYDDNAAVIIDQKGNPKGTRVFGAIAEELRELNFTKIVSLA 119
>UNIPROTKB|Q6END7 [details] [associations]
symbol:rpl14 "50S ribosomal protein L14, chloroplastic"
species:4536 "Oryza nivara" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 GO:GO:0009507 GO:GO:0009536 GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 EMBL:AP006728 GO:GO:0015934
RefSeq:YP_052786.1 ProteinModelPortal:Q6END7 SMR:Q6END7
GeneID:2885958 Gramene:Q6END7 ProtClustDB:CHL00057
Gene3D:2.40.150.20 HAMAP:MF_01367_B InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 TIGRFAMs:TIGR01067
PROSITE:PS00049 Uniprot:Q6END7
Length = 123
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 45/118 (38%), Positives = 67/118 (56%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPL---KGRKVARLGDTIVASVKEAMPTGXXXXXXXXXX 116
IQ +T+L V DNSGA+ +MCI+ + ++ AR+GD IVA +K+A+P
Sbjct: 2 IQPQTLLNVADNSGARKLMCIRVIGAASNQRYARIGDVIVAVIKDAVPQMPLERSEVIRA 61
Query: 117 XXXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTLA 174
+ DG +R+DDNA V++++ G P GTRVFG + ELR I++LA
Sbjct: 62 VIVRTCKEFKCEDGIIIRYDDNAAVIIDQKGNPKGTRVFGAIAEELRELNFTKIVSLA 119
>POMBASE|SPBC887.07 [details] [associations]
symbol:mrpl38 "mitochondrial ribosomal protein subunit
L38 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0032543 "mitochondrial translation"
evidence=NAS] InterPro:IPR000218 InterPro:IPR005745
InterPro:IPR023571 Pfam:PF00238 PomBase:SPBC887.07 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005762 GO:GO:0003735 GO:GO:0032543
Gene3D:2.40.150.20 InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 TIGRFAMs:TIGR01067 PROSITE:PS00049
HOGENOM:HOG000183702 eggNOG:COG0093 HSSP:P04450 PIR:T40732
RefSeq:NP_596481.2 STRING:O94292 GeneID:2541232 OrthoDB:EOG4350GM
NextBio:20802344 Uniprot:O94292
Length = 136
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 49/121 (40%), Positives = 62/121 (51%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGXXXXXXXXXXXXX 119
I ++ +LKV+DNSGA CI+ ++ K A LGD +V VK+A
Sbjct: 12 IGLKGILKVIDNSGATLAECIRVVRAGKFASLGDEVVVVVKKARSGSSVTAANKVKRGDI 71
Query: 120 XXXM------QHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHVSILTL 173
+ R DG VRFDDNA VLVNK EP GTR+ V +ELR K H I +L
Sbjct: 72 HHAIIVRTKSPVRRPDGRYVRFDDNACVLVNKECEPLGTRILSVVANELRTKHHTKIASL 131
Query: 174 A 174
A
Sbjct: 132 A 132
>TIGR_CMR|NSE_0276 [details] [associations]
symbol:NSE_0276 "ribosomal protein L14" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0015934
Gene3D:2.40.150.20 HAMAP:MF_01367_B PANTHER:PTHR11761
SUPFAM:SSF50193 TIGRFAMs:TIGR01067 PROSITE:PS00049
HOGENOM:HOG000183702 eggNOG:COG0093 KO:K02874 ProtClustDB:PRK05483
PANTHER:PTHR11761:SF3 OMA:KQFMKIV RefSeq:YP_506167.1
ProteinModelPortal:Q2GEC9 STRING:Q2GEC9 GeneID:3931476
KEGG:nse:NSE_0276 PATRIC:22680645
BioCyc:NSEN222891:GHFU-303-MONOMER Uniprot:Q2GEC9
Length = 119
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 49/119 (41%), Positives = 61/119 (51%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTGXXXXXXXXXXXXX 119
I+ TVL V DNSGA+ V+CI +K A +GD I SVK+ +P G
Sbjct: 2 IKKETVLDVADNSGARKVLCIGISGSKKTASIGDVITVSVKKCIPVGKVSAGSIHRAVVV 61
Query: 120 XXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKK-HVSILTLAEHL 177
R S V F DNAVVL+NK E GTRVFGP LRR K I +L++ +
Sbjct: 62 RVKK---RSSSSIVVFGDNAVVLLNKQNEMIGTRVFGPTDSLLRRNKGFAKISSLSQEV 117
>ASPGD|ASPL0000004926 [details] [associations]
symbol:AN6146 species:162425 "Emericella nidulans"
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000218
InterPro:IPR005745 InterPro:IPR023571 Pfam:PF00238 GO:GO:0006412
EMBL:BN001301 GO:GO:0003735 GO:GO:0015934 Gene3D:2.40.150.20
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
TIGRFAMs:TIGR01067 PROSITE:PS00049 HOGENOM:HOG000183702 OMA:KQFMKIV
EnsemblFungi:CADANIAT00006864 Uniprot:C8V2A9
Length = 131
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 49/126 (38%), Positives = 69/126 (54%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPLKGRKVARLGDTIVASVKEAMPTG-XXXXXXXXXXXX 118
IQ++T+L +DNSGA V C+ LK ++ A +GD IV V++ G
Sbjct: 2 IQLKTLLNCIDNSGAAVVECVNVLKKKRAATVGDRIVIVVQKQRNFGPEGTSSTGIANKV 61
Query: 119 XXXXMQHG----------RFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKHV 168
++H R DG+ V+FDDNA VLVNK+G+P GTR+ G V ELR ++
Sbjct: 62 RRGDIRHAVVVRVKKEMQRPDGTLVKFDDNACVLVNKSGDPIGTRMNGVVATELRGRQWS 121
Query: 169 SILTLA 174
IL+LA
Sbjct: 122 KILSLA 127
>CGD|CAL0000733 [details] [associations]
symbol:orf19.5684 species:5476 "Candida albicans" [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 CGD:CAL0000733 GO:GO:0006412 GO:GO:0003735
GO:GO:0015934 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 TIGRFAMs:TIGR01067
PROSITE:PS00049 HOGENOM:HOG000183702 eggNOG:COG0093
EMBL:AACQ01000261 RefSeq:XP_710513.1 ProteinModelPortal:Q59LB5
STRING:Q59LB5 GeneID:3647881 KEGG:cal:CaO19.5684 Uniprot:Q59LB5
Length = 132
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 50/127 (39%), Positives = 67/127 (52%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPL--KGRKVARLGDTIVASVKEAMP-----TGXXXXXX 112
I ++++L V+DNSGA+ V CI+ L K + A++GD I VK+A P TG
Sbjct: 2 IYLKSLLNVIDNSGAQVVECIKVLRHKPKSCAQIGDRITCVVKQARPLQQELTGQSSTNR 61
Query: 113 XXXXXXXXXXMQHGRF-----DGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKKH 167
+ R DGS VRFDDNA VL+NK GEP GTR+ V EL+ +
Sbjct: 62 VKRRDICQAVVVRTRAPLKRKDGSVVRFDDNACVLINKNGEPLGTRISSVVAKELKDLNY 121
Query: 168 VSILTLA 174
I+ LA
Sbjct: 122 NKIVALA 128
>SGD|S000001653 [details] [associations]
symbol:MRPL38 "Mitochondrial ribosomal protein of the large
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0003735
"structural constituent of ribosome" evidence=IEA;IDA;IPI]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005762 "mitochondrial large ribosomal subunit"
evidence=IDA;IPI] [GO:0032543 "mitochondrial translation"
evidence=IC] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0015934 "large ribosomal subunit" evidence=IEA]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 SGD:S000001653 EMBL:BK006944 GO:GO:0005762
GO:GO:0003735 GO:GO:0032543 EMBL:Z26878 Gene3D:2.40.150.20
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
TIGRFAMs:TIGR01067 PROSITE:PS00049 HOGENOM:HOG000183702
eggNOG:COG0093 PANTHER:PTHR11761:SF3 OrthoDB:EOG4350GM EMBL:Z28169
EMBL:AY693037 PIR:S38000 RefSeq:NP_012751.1
ProteinModelPortal:P35996 SMR:P35996 DIP:DIP-6834N IntAct:P35996
MINT:MINT-629714 STRING:P35996 PaxDb:P35996 PeptideAtlas:P35996
EnsemblFungi:YKL170W GeneID:853684 KEGG:sce:YKL170W CYGD:YKL170w
OMA:IMANDGC NextBio:974652 Genevestigator:P35996 GermOnline:YKL170W
Uniprot:P35996
Length = 138
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 39/110 (35%), Positives = 55/110 (50%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPL-KG--RKVARLGDTIVASVKEAMPTGXXXXXXXXXX 116
I +++V+KV+DNSGA+ CI+ + KG + A +GD IV +++A P
Sbjct: 2 IFLKSVIKVIDNSGAQLAECIKVIRKGSPKSPAMVGDRIVCVIQKAKPLTQNITGTANTN 61
Query: 117 XXXXXXMQHG-----------RFDGSEVRFDDNAVVLVNK-AGEPTGTRV 154
+ H R DGS V F D A VL+NK GEP GTR+
Sbjct: 62 RVKKGDICHAIVVRSKQRNMCRKDGSTVAFGDTACVLINKNTGEPLGTRI 111
>DICTYBASE|DDB_G0294066 [details] [associations]
symbol:mrpl14 "ribosomal protein L14, mitochondrial"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA;IC] [GO:0005762 "mitochondrial large ribosomal
subunit" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;IC] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR000218 InterPro:IPR005745
InterPro:IPR023571 Pfam:PF00238 dictyBase:DDB_G0294066
GO:GO:0006412 GO:GO:0005762 GO:GO:0003735 EMBL:AB000109
GenomeReviews:AB000109_GR EMBL:D63523 Gene3D:2.40.150.20
PANTHER:PTHR11761 SUPFAM:SSF50193 TIGRFAMs:TIGR01067
PROSITE:PS00049 eggNOG:COG0093 PANTHER:PTHR11761:SF3 PIR:T43775
RefSeq:NP_050096.1 ProteinModelPortal:O21033 STRING:O21033
GeneID:2193922 KEGG:ddi:DidioMp29 OMA:LKVECIN Uniprot:O21033
Length = 129
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 41/115 (35%), Positives = 57/115 (49%)
Query: 68 VVDNSGAKTVMCIQPLKGRK---VARLGDTIVASVK--EAMPTGXXXXXXXXXXXXXXXX 122
V+DNSGA+ V CIQ L+G+K + R+GD IV +K E G
Sbjct: 10 VMDNSGARKVQCIQTLEGKKPTSLLRVGDKIVVVIKKMEKRKGGKYKLKVKKSDVCYAVI 69
Query: 123 MQHG----RFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRK---KHVSI 170
++ R G V +N V+L+ K EP GTR+ G V E++R K+VSI
Sbjct: 70 VKSKQPVRRKSGIIVNAGENGVILLTKTKEPIGTRLTGVVFKEVQRTGLLKNVSI 124
>UNIPROTKB|E1BY89 [details] [associations]
symbol:RPL23 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0005730 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049
GeneTree:ENSGT00390000004690 OMA:QRKEYRR EMBL:AADN02022227
EMBL:AADN02022228 IPI:IPI00598304 Ensembl:ENSGALT00000002496
NextBio:20822975 Uniprot:E1BY89
Length = 140
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 34/103 (33%), Positives = 52/103 (50%)
Query: 65 VLKVVDNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGXXXXXXXXXXXX 118
V+K DN+GAK ++ ++ +KGR A +GD ++A+VK+ P
Sbjct: 25 VIKGADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPE---LRKKVHPAVV 81
Query: 119 XXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
+ R DG + F+DNA V+VN GE G+ + GPV E
Sbjct: 82 IRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKE 124
>UNIPROTKB|Q3T057 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9913 "Bos
taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 GO:GO:0003735 GO:GO:0022625
Gene3D:2.40.150.20 InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093 HOGENOM:HOG000183703
KO:K02894 GeneTree:ENSGT00390000004690 OMA:QRKEYRR EMBL:BC102556
EMBL:BC148014 IPI:IPI00695041 RefSeq:NP_001030186.1
UniGene:Bt.48897 ProteinModelPortal:Q3T057 SMR:Q3T057 STRING:Q3T057
PRIDE:Q3T057 Ensembl:ENSBTAT00000004190 GeneID:504876
KEGG:bta:504876 CTD:9349 HOVERGEN:HBG000282 InParanoid:Q3T057
OrthoDB:EOG4CRM1G NextBio:20866877 Uniprot:Q3T057
Length = 140
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 65 VLKVVDNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGXXXXXXXXXXXX 118
V+ DN+GAK ++ ++ +KGR A +GD ++A+VK+ P
Sbjct: 25 VINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPE---LRKKVHPAVV 81
Query: 119 XXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
+ R DG + F+DNA V+VN GE G+ + GPV E
Sbjct: 82 IRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKE 124
>UNIPROTKB|F2Z4P3 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9615
"Canis lupus familiaris" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000218
InterPro:IPR023571 Pfam:PF00238 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049
GeneTree:ENSGT00390000004690 OMA:QRKEYRR EMBL:AAEX03006484
ProteinModelPortal:F2Z4P3 SMR:F2Z4P3 PRIDE:F2Z4P3
Ensembl:ENSCAFT00000026221 Uniprot:F2Z4P3
Length = 140
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 65 VLKVVDNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGXXXXXXXXXXXX 118
V+ DN+GAK ++ ++ +KGR A +GD ++A+VK+ P
Sbjct: 25 VINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPE---LRKKVHPAVV 81
Query: 119 XXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
+ R DG + F+DNA V+VN GE G+ + GPV E
Sbjct: 82 IRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKE 124
>UNIPROTKB|Q9XSU3 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000218
InterPro:IPR023571 Pfam:PF00238 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:NOG291117 Gene3D:2.40.150.20
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
PROSITE:PS00049 HOGENOM:HOG000183703 KO:K02894 CTD:9349
HOVERGEN:HBG000282 EMBL:AJ388521 RefSeq:NP_001003100.1
UniGene:Cfa.3547 PRIDE:Q9XSU3 GeneID:403683 KEGG:cfa:403683
NextBio:20817187 Uniprot:Q9XSU3
Length = 140
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 65 VLKVVDNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGXXXXXXXXXXXX 118
V+ DN+GAK ++ ++ +KGR A +GD ++A+VK+ P
Sbjct: 25 VINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPX---LRKKVHPAVV 81
Query: 119 XXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
+ R DG + F+DNA V+VN GE G+ + GPV E
Sbjct: 82 IRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVXKE 124
>UNIPROTKB|P62829 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9606 "Homo
sapiens" [GO:0005730 "nucleolus" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=NAS] [GO:0005840
"ribosome" evidence=NAS] [GO:0006610 "ribosomal protein import into
nucleus" evidence=NAS] [GO:0006412 "translation" evidence=NAS;TAS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0006414 "translational elongation" evidence=TAS] [GO:0006415
"translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR000218
InterPro:IPR023571 Pfam:PF00238 EMBL:X52839 Reactome:REACT_116125
GO:GO:0005730 GO:GO:0000184 GO:GO:0006413 GO:GO:0003735
GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614
GO:GO:0022625 GO:GO:0019083 GO:GO:0006610 Gene3D:2.40.150.20
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
PROSITE:PS00049 eggNOG:COG0093 HOGENOM:HOG000183703 KO:K02894
OMA:QRKEYRR CTD:9349 HOVERGEN:HBG000282 OrthoDB:EOG4CRM1G
ChiTaRS:RpL23 EMBL:X55954 EMBL:AB061827 EMBL:BC010114 EMBL:BC062716
EMBL:BC104651 EMBL:BC106061 IPI:IPI00010153 PIR:S18815
RefSeq:NP_000969.1 UniGene:Hs.406300 ProteinModelPortal:P62829
SMR:P62829 IntAct:P62829 MINT:MINT-5001181 STRING:P62829
PhosphoSite:P62829 DMDM:51338639 SWISS-2DPAGE:P62829 PaxDb:P62829
PRIDE:P62829 Ensembl:ENST00000394332 Ensembl:ENST00000479035
GeneID:9349 KEGG:hsa:9349 UCSC:uc002hqx.1 GeneCards:GC17M037005
HGNC:HGNC:10316 HPA:HPA003373 MIM:603662 neXtProt:NX_P62829
PharmGKB:PA34690 InParanoid:P62829 PhylomeDB:P62829 GenomeRNAi:9349
NextBio:35009 ArrayExpress:P62829 Bgee:P62829 CleanEx:HS_RPL23
Genevestigator:P62829 GermOnline:ENSG00000125691 Uniprot:P62829
Length = 140
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 65 VLKVVDNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGXXXXXXXXXXXX 118
V+ DN+GAK ++ ++ +KGR A +GD ++A+VK+ P
Sbjct: 25 VINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPE---LRKKVHPAVV 81
Query: 119 XXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
+ R DG + F+DNA V+VN GE G+ + GPV E
Sbjct: 82 IRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKE 124
>UNIPROTKB|P62831 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0005730 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049 KO:K02894
GeneTree:ENSGT00390000004690 OMA:QRKEYRR CTD:9349
HOVERGEN:HBG000282 EMBL:F14853 EMBL:DQ629166 RefSeq:NP_001123427.1
UniGene:Ssc.53748 ProteinModelPortal:P62831 SMR:P62831 PRIDE:P62831
Ensembl:ENSSSCT00000030349 GeneID:414398 KEGG:ssc:414398
Uniprot:P62831
Length = 140
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 65 VLKVVDNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGXXXXXXXXXXXX 118
V+ DN+GAK ++ ++ +KGR A +GD ++A+VK+ P
Sbjct: 25 VINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPE---LRKKVHPAVV 81
Query: 119 XXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
+ R DG + F+DNA V+VN GE G+ + GPV E
Sbjct: 82 IRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKE 124
>MGI|MGI:1929455 [details] [associations]
symbol:Rpl23 "ribosomal protein L23" species:10090 "Mus
musculus" [GO:0003735 "structural constituent of ribosome"
evidence=ISA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=ISA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO] [GO:0022626
"cytosolic ribosome" evidence=ISA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 MGI:MGI:1929455 GO:GO:0005730 GO:GO:0006412
GO:GO:0003735 GO:GO:0022626 GO:GO:0022625 Gene3D:2.40.150.20
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
PROSITE:PS00049 eggNOG:COG0093 KO:K02894
GeneTree:ENSGT00390000004690 OMA:QRKEYRR CTD:9349
HOVERGEN:HBG000282 OrthoDB:EOG4CRM1G ChiTaRS:RpL23 EMBL:AF158022
EMBL:AF287271 EMBL:AK002579 EMBL:AK010680 EMBL:AK012694
EMBL:AK018730 EMBL:AK150671 EMBL:AK168133 EMBL:BC025918
EMBL:BC081448 IPI:IPI00139780 RefSeq:NP_075029.1
RefSeq:XP_003688806.1 RefSeq:XP_003689266.1 UniGene:Mm.140380
ProteinModelPortal:P62830 SMR:P62830 IntAct:P62830 STRING:P62830
PaxDb:P62830 PRIDE:P62830 Ensembl:ENSMUST00000103146
GeneID:100044627 GeneID:100862455 GeneID:65019 KEGG:mmu:100044627
KEGG:mmu:100862455 KEGG:mmu:65019 InParanoid:P62830 NextBio:320251
Bgee:P62830 CleanEx:MM_RPL23 Genevestigator:P62830
GermOnline:ENSMUSG00000071415 Uniprot:P62830
Length = 140
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 65 VLKVVDNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGXXXXXXXXXXXX 118
V+ DN+GAK ++ ++ +KGR A +GD ++A+VK+ P
Sbjct: 25 VINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPE---LRKKVHPAVV 81
Query: 119 XXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
+ R DG + F+DNA V+VN GE G+ + GPV E
Sbjct: 82 IRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKE 124
>RGD|62067 [details] [associations]
symbol:Rpl23 "ribosomal protein L23" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA;ISO]
InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238 RGD:62067
GO:GO:0005730 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.150.20 InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093 HOGENOM:HOG000183703
KO:K02894 GeneTree:ENSGT00390000004690 OMA:QRKEYRR CTD:9349
HOVERGEN:HBG000282 OrthoDB:EOG4CRM1G EMBL:X58200 EMBL:BC058500
IPI:IPI00207980 PIR:JH0418 RefSeq:NP_001007600.1 UniGene:Rn.103172
ProteinModelPortal:P62832 SMR:P62832 IntAct:P62832 STRING:P62832
PhosphoSite:P62832 PRIDE:P62832 Ensembl:ENSRNOT00000005471
GeneID:29282 KEGG:rno:29282 UCSC:RGD:62067 InParanoid:P62832
NextBio:608657 Genevestigator:P62832 GermOnline:ENSRNOG00000004107
Uniprot:P62832
Length = 140
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 65 VLKVVDNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGXXXXXXXXXXXX 118
V+ DN+GAK ++ ++ +KGR A +GD ++A+VK+ P
Sbjct: 25 VINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPE---LRKKVHPAVV 81
Query: 119 XXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
+ R DG + F+DNA V+VN GE G+ + GPV E
Sbjct: 82 IRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKE 124
>WB|WBGene00004435 [details] [associations]
symbol:rpl-23 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238
InterPro:IPR001610 GO:GO:0009792 GO:GO:0040007 GO:GO:0007165
GO:GO:0002119 GO:GO:0006355 GO:GO:0006412 GO:GO:0018996
GO:GO:0000003 GO:GO:0005840 GO:GO:0003735 SMART:SM00086
EMBL:FO080138 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093
HOGENOM:HOG000183703 KO:K02894 GeneTree:ENSGT00390000004690
OMA:QRKEYRR PIR:T15337 RefSeq:NP_498231.1 ProteinModelPortal:P48158
SMR:P48158 DIP:DIP-27299N IntAct:P48158 MINT:MINT-213738
STRING:P48158 PaxDb:P48158 EnsemblMetazoa:B0336.10.1
EnsemblMetazoa:B0336.10.2 EnsemblMetazoa:B0336.10.3 GeneID:175796
KEGG:cel:CELE_B0336.10 UCSC:B0336.10.2 CTD:175796 WormBase:B0336.10
InParanoid:P48158 NextBio:889716 Uniprot:P48158
Length = 140
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 35/103 (33%), Positives = 49/103 (47%)
Query: 65 VLKVVDNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGXXXXXXXXXXXX 118
V+ DN+GAK V+ + ++GR A +GD V SVK+ P
Sbjct: 25 VMNCADNTGAKNLFVISVYGIRGRLNRLPSAGVGDMFVCSVKKGKPE---LRKKVLQGVV 81
Query: 119 XXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
Q R DG+ + F+DNA V+VN GE G+ + GPV E
Sbjct: 82 IRQRKQFRRKDGTFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 124
>ZFIN|ZDB-GENE-030131-8756 [details] [associations]
symbol:rpl23 "ribosomal protein L23" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238
ZFIN:ZDB-GENE-030131-8756 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.150.20 InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093 HOGENOM:HOG000183703
KO:K02894 GeneTree:ENSGT00390000004690 OMA:QRKEYRR CTD:9349
HOVERGEN:HBG000282 OrthoDB:EOG4CRM1G EMBL:BC049038 EMBL:BC059509
IPI:IPI00481155 RefSeq:NP_957026.1 UniGene:Dr.30814
ProteinModelPortal:Q6PC14 STRING:Q6PC14 PRIDE:Q6PC14
Ensembl:ENSDART00000075495 GeneID:336812 KEGG:dre:336812
InParanoid:Q6PC14 NextBio:20811915 Bgee:Q6PC14 Uniprot:Q6PC14
Length = 140
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 65 VLKVVDNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGXXXXXXXXXXXX 118
V+ DN+GAK ++ ++ +KGR A +GD ++A+VK+ P
Sbjct: 25 VINCADNTGAKNLYIISVKGIKGRLNRLPSAGVGDMVMATVKKGKPE---LRKKVHPAVV 81
Query: 119 XXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
+ R DG + F+DNA V+VN GE G+ + GPV E
Sbjct: 82 IRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKE 124
>FB|FBgn0010078 [details] [associations]
symbol:RpL23 "Ribosomal protein L23" species:7227 "Drosophila
melanogaster" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISS;NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS;NAS] [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0005840 "ribosome" evidence=NAS] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238 EMBL:AE013599
GO:GO:0022008 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0000022 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093
KO:K02894 GeneTree:ENSGT00390000004690 OMA:QRKEYRR CTD:9349
EMBL:M85295 EMBL:BT053700 PIR:JC1253 RefSeq:NP_523813.1
UniGene:Dm.6664 ProteinModelPortal:P48159 SMR:P48159 DIP:DIP-21429N
IntAct:P48159 MINT:MINT-943050 STRING:P48159 PaxDb:P48159
EnsemblMetazoa:FBtr0071897 GeneID:37628 KEGG:dme:Dmel_CG3661
FlyBase:FBgn0010078 InParanoid:P48159 OrthoDB:EOG437PX9
PhylomeDB:P48159 ChiTaRS:RpL23 GenomeRNAi:37628 NextBio:804633
Bgee:P48159 GermOnline:CG3661 Uniprot:P48159
Length = 140
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 34/103 (33%), Positives = 48/103 (46%)
Query: 65 VLKVVDNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGXXXXXXXXXXXX 118
V+ DN+GAK V+ + ++GR A +GD VA+VK+ P
Sbjct: 25 VMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVKKGKPE---LRKKVMPAVV 81
Query: 119 XXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
R DG + F+DNA V+VN GE G+ + GPV E
Sbjct: 82 IRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 124
>UNIPROTKB|J9P897 [details] [associations]
symbol:J9P897 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.150.20 InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 GeneTree:ENSGT00390000004690
EMBL:AAEX03005517 Ensembl:ENSCAFT00000016692 OMA:YAKIGST
Uniprot:J9P897
Length = 140
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 32/103 (31%), Positives = 50/103 (48%)
Query: 65 VLKVVDNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGXXXXXXXXXXXX 118
V+ DN+GAK ++ ++ +KGR A +GD ++A+VK+ P
Sbjct: 25 VINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPE---LRKKVHPAVV 81
Query: 119 XXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
+ R DG + F+DN V+VN GE G+ + GPV E
Sbjct: 82 IRQRKSYRRKDGVFLYFEDNTGVIVNNKGEMKGSAITGPVAKE 124
>UNIPROTKB|G3MY15 [details] [associations]
symbol:G3MY15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0005730 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.150.20 PANTHER:PTHR11761 SUPFAM:SSF50193
GeneTree:ENSGT00390000004690 EMBL:DAAA02008675
Ensembl:ENSBTAT00000064605 OMA:PIAKECA Uniprot:G3MY15
Length = 132
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 65 VLKVVDNSGAKTVMCIQPLKGRKV-------ARLGDTIVASVKEAMPTGXXXXXXXXXXX 117
V+ DN+GAK + I +KG KV A +GD ++A+VK+ P
Sbjct: 17 VINCADNTGAKNLYIIS-VKGIKVQLNRLSAAGVGDMVMATVKKGKPE---LRKKEHLTV 72
Query: 118 XXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
+ R DG + F+DNA V VN GE G+ + GP+ E
Sbjct: 73 VIRQRKSYRREDGVFLYFEDNAGVTVNNKGEMKGSAITGPIAKE 116
>DICTYBASE|DDB_G0290315 [details] [associations]
symbol:rpl23 "S60 ribosomal protein L23"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000218
InterPro:IPR023571 Pfam:PF00238 dictyBase:DDB_G0290315
GO:GO:0006412 GenomeReviews:CM000154_GR GO:GO:0005840 GO:GO:0003735
EMBL:AAFI02000162 Gene3D:2.40.150.20 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093 KO:K02894
OMA:QRKEYRR RefSeq:XP_635797.1 HSSP:P22450
ProteinModelPortal:Q54G86 SMR:Q54G86 STRING:Q54G86
EnsemblProtists:DDB0230148 GeneID:8627602 KEGG:ddi:DDB_G0290315
ProtClustDB:PTZ00054 Uniprot:Q54G86
Length = 136
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 35/104 (33%), Positives = 50/104 (48%)
Query: 65 VLKVVDNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGXXXXXXXXXXXX 118
V+ DNSGAK V+ ++ +KGR A +GD ++A+VK+ P
Sbjct: 22 VMNSADNSGAKNLYVIAVKGIKGRLNRLPSAGVGDMVMATVKKGKPE----LRKKVCTGL 77
Query: 119 XXXXMQHG-RFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
+H R DG + F+DNA V+ N GE G + GPV E
Sbjct: 78 VVRQRKHWKRKDGVYIYFEDNAGVMCNPKGEVKGN-ILGPVAKE 120
>POMBASE|SPAC3G9.03 [details] [associations]
symbol:rpl2301 "60S ribosomal protein L23" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 PomBase:SPCC1322.11 PomBase:SPAC3G9.03 GO:GO:0005739
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0022625
Gene3D:2.40.150.20 InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093 HOGENOM:HOG000183703
KO:K02894 PIR:T11639 RefSeq:NP_588139.1 RefSeq:NP_594075.1
ProteinModelPortal:O42867 SMR:O42867 STRING:O42867 PRIDE:O42867
EnsemblFungi:SPAC3G9.03.1 EnsemblFungi:SPCC1322.11.1 GeneID:2539286
GeneID:2543453 KEGG:spo:SPAC3G9.03 KEGG:spo:SPCC1322.11 OMA:NCFTRIT
OrthoDB:EOG4H1F56 NextBio:20800453 Uniprot:O42867
Length = 139
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 32/108 (29%), Positives = 50/108 (46%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPL-KGRKVARL-----GDTIVASVKEAMPTGXXXXXXX 113
+ ++ ++ DNSGAK + + G ++ RL GD ++A+VK+ P
Sbjct: 19 LPVQAIMNCADNSGAKNLYIVSVFGTGARLNRLPAASCGDMVLATVKKGKPD---LRKKI 75
Query: 114 XXXXXXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
R DG + F+DNA V+VN GE G+ + GPV E
Sbjct: 76 MPAIVVRQRKAWRRKDGVYLYFEDNAGVIVNPKGEMKGSAITGPVAKE 123
>POMBASE|SPCC1322.11 [details] [associations]
symbol:rpl2302 "60S ribosomal protein L23" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=ISO] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISO] InterPro:IPR000218
InterPro:IPR023571 Pfam:PF00238 PomBase:SPCC1322.11
PomBase:SPAC3G9.03 GO:GO:0005739 GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0003735 GO:GO:0002181 GO:GO:0022625 Gene3D:2.40.150.20
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
PROSITE:PS00049 eggNOG:COG0093 HOGENOM:HOG000183703 KO:K02894
PIR:T11639 RefSeq:NP_588139.1 RefSeq:NP_594075.1
ProteinModelPortal:O42867 SMR:O42867 STRING:O42867 PRIDE:O42867
EnsemblFungi:SPAC3G9.03.1 EnsemblFungi:SPCC1322.11.1 GeneID:2539286
GeneID:2543453 KEGG:spo:SPAC3G9.03 KEGG:spo:SPCC1322.11 OMA:NCFTRIT
OrthoDB:EOG4H1F56 NextBio:20800453 Uniprot:O42867
Length = 139
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 32/108 (29%), Positives = 50/108 (46%)
Query: 60 IQMRTVLKVVDNSGAKTVMCIQPL-KGRKVARL-----GDTIVASVKEAMPTGXXXXXXX 113
+ ++ ++ DNSGAK + + G ++ RL GD ++A+VK+ P
Sbjct: 19 LPVQAIMNCADNSGAKNLYIVSVFGTGARLNRLPAASCGDMVLATVKKGKPD---LRKKI 75
Query: 114 XXXXXXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
R DG + F+DNA V+VN GE G+ + GPV E
Sbjct: 76 MPAIVVRQRKAWRRKDGVYLYFEDNAGVIVNPKGEMKGSAITGPVAKE 123
>TAIR|locus:2018309 [details] [associations]
symbol:AT1G04480 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238 EMBL:CP002684
EMBL:CP002686 EMBL:CP002685 GO:GO:0005730 GO:GO:0006412
EMBL:AC000104 GO:GO:0003735 UniGene:At.20792 EMBL:AC002332
EMBL:AC022287 GO:GO:0022625 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093
KO:K02894 EMBL:AY042843 EMBL:AY054508 EMBL:AY072481 EMBL:AY081677
EMBL:AY086853 EMBL:AY088227 EMBL:AY088893 EMBL:Z18477 EMBL:Z18371
IPI:IPI00524788 PIR:F84744 RefSeq:NP_180895.1 RefSeq:NP_187090.1
RefSeq:NP_563707.1 UniGene:At.11034 UniGene:At.22254
UniGene:At.28146 ProteinModelPortal:P49690 SMR:P49690 STRING:P49690
PaxDb:P49690 PRIDE:P49690 EnsemblPlants:AT1G04480.1
EnsemblPlants:AT2G33370.1 EnsemblPlants:AT3G04400.1 GeneID:817900
GeneID:819595 GeneID:839511 KEGG:ath:AT1G04480 KEGG:ath:AT2G33370
KEGG:ath:AT3G04400 TAIR:At1g04480 TAIR:At2g33370 TAIR:At3g04400
InParanoid:P49690 OMA:QRKEYRR PhylomeDB:P49690
ProtClustDB:CLSN2683488 Genevestigator:P49690 Uniprot:P49690
Length = 140
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 31/108 (28%), Positives = 51/108 (47%)
Query: 60 IQMRTVLKVVDNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGXXXXXXX 113
+ + + DN+GAK ++ ++ +KGR A +GD ++A+VK+ P
Sbjct: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKV 76
Query: 114 XXXXXXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
R DG + F+DNA V+VN GE G+ + GP+ E
Sbjct: 77 LPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 124
>TAIR|locus:2051119 [details] [associations]
symbol:AT2G33370 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238
EMBL:CP002684 EMBL:CP002686 EMBL:CP002685 GO:GO:0005730
GO:GO:0006412 EMBL:AC000104 GO:GO:0003735 UniGene:At.20792
EMBL:AC002332 EMBL:AC022287 GO:GO:0022625 Gene3D:2.40.150.20
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
PROSITE:PS00049 eggNOG:COG0093 KO:K02894 EMBL:AY042843
EMBL:AY054508 EMBL:AY072481 EMBL:AY081677 EMBL:AY086853
EMBL:AY088227 EMBL:AY088893 EMBL:Z18477 EMBL:Z18371 IPI:IPI00524788
PIR:F84744 RefSeq:NP_180895.1 RefSeq:NP_187090.1 RefSeq:NP_563707.1
UniGene:At.11034 UniGene:At.22254 UniGene:At.28146
ProteinModelPortal:P49690 SMR:P49690 STRING:P49690 PaxDb:P49690
PRIDE:P49690 EnsemblPlants:AT1G04480.1 EnsemblPlants:AT2G33370.1
EnsemblPlants:AT3G04400.1 GeneID:817900 GeneID:819595 GeneID:839511
KEGG:ath:AT1G04480 KEGG:ath:AT2G33370 KEGG:ath:AT3G04400
TAIR:At1g04480 TAIR:At2g33370 TAIR:At3g04400 InParanoid:P49690
OMA:QRKEYRR PhylomeDB:P49690 ProtClustDB:CLSN2683488
Genevestigator:P49690 Uniprot:P49690
Length = 140
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 31/108 (28%), Positives = 51/108 (47%)
Query: 60 IQMRTVLKVVDNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGXXXXXXX 113
+ + + DN+GAK ++ ++ +KGR A +GD ++A+VK+ P
Sbjct: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKV 76
Query: 114 XXXXXXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
R DG + F+DNA V+VN GE G+ + GP+ E
Sbjct: 77 LPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 124
>TAIR|locus:2100915 [details] [associations]
symbol:emb2171 "embryo defective 2171" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA]
InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238 EMBL:CP002684
EMBL:CP002686 EMBL:CP002685 GO:GO:0005730 GO:GO:0006412
EMBL:AC000104 GO:GO:0003735 UniGene:At.20792 EMBL:AC002332
EMBL:AC022287 GO:GO:0022625 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093
KO:K02894 EMBL:AY042843 EMBL:AY054508 EMBL:AY072481 EMBL:AY081677
EMBL:AY086853 EMBL:AY088227 EMBL:AY088893 EMBL:Z18477 EMBL:Z18371
IPI:IPI00524788 PIR:F84744 RefSeq:NP_180895.1 RefSeq:NP_187090.1
RefSeq:NP_563707.1 UniGene:At.11034 UniGene:At.22254
UniGene:At.28146 ProteinModelPortal:P49690 SMR:P49690 STRING:P49690
PaxDb:P49690 PRIDE:P49690 EnsemblPlants:AT1G04480.1
EnsemblPlants:AT2G33370.1 EnsemblPlants:AT3G04400.1 GeneID:817900
GeneID:819595 GeneID:839511 KEGG:ath:AT1G04480 KEGG:ath:AT2G33370
KEGG:ath:AT3G04400 TAIR:At1g04480 TAIR:At2g33370 TAIR:At3g04400
InParanoid:P49690 OMA:QRKEYRR PhylomeDB:P49690
ProtClustDB:CLSN2683488 Genevestigator:P49690 Uniprot:P49690
Length = 140
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 31/108 (28%), Positives = 51/108 (47%)
Query: 60 IQMRTVLKVVDNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGXXXXXXX 113
+ + + DN+GAK ++ ++ +KGR A +GD ++A+VK+ P
Sbjct: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKV 76
Query: 114 XXXXXXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
R DG + F+DNA V+VN GE G+ + GP+ E
Sbjct: 77 LPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 124
>ASPGD|ASPL0000077643 [details] [associations]
symbol:AN4494 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:BN001303 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049
HOGENOM:HOG000183703 OMA:QRKEYRR EnsemblFungi:CADANIAT00005951
Uniprot:C8V8E0
Length = 140
Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 35/104 (33%), Positives = 49/104 (47%)
Query: 65 VLKVVDNSGAKTVMCIQPLKG--RKVARL-----GDTIVASVKEAMPTGXXXXXXXXXXX 117
VL DNSGA+ + I +KG ++ RL GD ++A+VK+ P
Sbjct: 25 VLNCCDNSGARNLYIIS-VKGIGARLNRLPAAGVGDMVMATVKKGKPE---LRKKVMPAV 80
Query: 118 XXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
R DG + F+DNA V+VN GE G+ + GPV E
Sbjct: 81 VVRQSKPWRRPDGIYLYFEDNAGVIVNAKGEMKGSAITGPVGKE 124
>UNIPROTKB|J3KT29 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.150.20 InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 ChiTaRS:RpL23 HGNC:HGNC:10316
EMBL:AC110749 ProteinModelPortal:J3KT29 Ensembl:ENST00000577407
Uniprot:J3KT29
Length = 122
Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 65 VLKVVDNSGAKT--VMCIQPLKGR----KVARLGDTIVASVKEAMPTGXXXXXXXXXXXX 118
V+ DN+GAK ++ ++ +KGR A +GD ++A+VK+ P
Sbjct: 25 VINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPE---LRKKVHPAVV 81
Query: 119 XXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVP 159
+ R DG + F+DNA V+VN GE G + VP
Sbjct: 82 IRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGRKSVQLVP 122
>UNIPROTKB|Q6P1L8 [details] [associations]
symbol:MRPL14 "39S ribosomal protein L14, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238
GO:GO:0005739 EMBL:CH471081 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.150.20 SUPFAM:SSF50193 PROSITE:PS00049
HSSP:P04450 CTD:64928 eggNOG:NOG331407 HOGENOM:HOG000183701
HOVERGEN:HBG088508 OMA:ALGNTPY OrthoDB:EOG4CRM1C EMBL:AK312086
EMBL:AL109615 EMBL:BC065005 EMBL:AB051339 IPI:IPI00418290
RefSeq:NP_115487.2 UniGene:Hs.311190 ProteinModelPortal:Q6P1L8
SMR:Q6P1L8 IntAct:Q6P1L8 STRING:Q6P1L8 PhosphoSite:Q6P1L8
DMDM:74749064 PaxDb:Q6P1L8 PeptideAtlas:Q6P1L8 PRIDE:Q6P1L8
DNASU:64928 Ensembl:ENST00000372014 GeneID:64928 KEGG:hsa:64928
UCSC:uc003owp.3 GeneCards:GC06M044128 HGNC:HGNC:14279 HPA:HPA038769
MIM:611827 neXtProt:NX_Q6P1L8 PharmGKB:PA30943 InParanoid:Q6P1L8
PhylomeDB:Q6P1L8 ChiTaRS:MRPL14 GenomeRNAi:64928 NextBio:67102
Bgee:Q6P1L8 CleanEx:HS_MRPL14 CleanEx:HS_MRPL32
Genevestigator:Q6P1L8 GermOnline:ENSG00000180992 Uniprot:Q6P1L8
Length = 145
Score = 101 (40.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 36/125 (28%), Positives = 55/125 (44%)
Query: 60 IQMRTVLKVVDNSGA------KTVMCIQPLKGRKVARLGDTIVASVKEAMPTGXXXXXXX 113
IQ T ++VVDNS + CI K V ++GD I+ ++K
Sbjct: 32 IQKMTRVRVVDNSALGNSPYHRAPRCIHVYKKNGVGKVGDQILLAIK----------GQK 81
Query: 114 XXXXXXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKK--HVSIL 171
M R RFD N VVL+ G P GTR+ P+P LR+++ + +L
Sbjct: 82 KKALIVGHCMPGPRMTP---RFDSNNVVLIEDNGNPVGTRIKTPIPTSLRKREGEYSKVL 138
Query: 172 TLAEH 176
+A++
Sbjct: 139 AIAQN 143
>SGD|S000000183 [details] [associations]
symbol:RPL23A "Ribosomal 60S subunit protein L23A"
species:4932 "Saccharomyces cerevisiae" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;TAS] [GO:0002181 "cytoplasmic translation"
evidence=TAS] InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238
SGD:S000000183 EMBL:BK006936 GO:GO:0003735 GO:GO:0002181
EMBL:X79489 PDB:4B6A PDBsum:4B6A PDB:3J16 PDBsum:3J16 GO:GO:0022625
PDB:2X7N PDBsum:2X7N Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049 PDB:1K5Y PDB:1S1I
PDB:3IZS PDB:3O58 PDB:3O5H PDB:3U5E PDB:3U5I PDBsum:1K5Y
PDBsum:1S1I PDBsum:3IZS PDBsum:3O58 PDBsum:3O5H PDBsum:3U5E
PDBsum:3U5I EMBL:X01694 EMBL:Z35848 PIR:A02792 RefSeq:NP_009466.1
RefSeq:NP_011042.3 RefSeq:NP_011047.3 ProteinModelPortal:P0CX41
SMR:P0CX41 EnsemblFungi:YBL087C EnsemblFungi:YER117W GeneID:852191
GeneID:856853 GeneID:856858 KEGG:sce:YBL087C KEGG:sce:YER117W
KEGG:sce:YER121W CYGD:YBL087c HOGENOM:HOG000183703 KO:K02894
EvolutionaryTrace:P0CX41 NextBio:970670 ArrayExpress:P0CX41
GermOnline:YBL087C Uniprot:P0CX41
Length = 137
Score = 98 (39.6 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 32/104 (30%), Positives = 46/104 (44%)
Query: 65 VLKVVDNSGAKTVMCIQPLKGR-------KVARLGDTIVASVKEAMPTGXXXXXXXXXXX 117
++ DNSGA+ + I +KG A LGD ++A+VK+ P
Sbjct: 22 IMNCADNSGARNLYIIA-VKGSGSRLNRLPAASLGDMVMATVKKGKPE---LRKKVMPAI 77
Query: 118 XXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
R DG + F+DNA V+ N GE G+ + GPV E
Sbjct: 78 VVRQAKSWRRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKE 121
>SGD|S000000919 [details] [associations]
symbol:RPL23B "Ribosomal 60S subunit protein L23B"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=TAS] [GO:0002181 "cytoplasmic
translation" evidence=TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238
SGD:S000000919 EMBL:BK006939 GO:GO:0003735 GO:GO:0002181
EMBL:U18916 EMBL:U15653 GO:GO:0022625 Gene3D:2.40.150.20
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
PROSITE:PS00049 PIR:A02792 RefSeq:NP_009466.1 RefSeq:NP_011042.3
RefSeq:NP_011047.3 EnsemblFungi:YBL087C EnsemblFungi:YER117W
GeneID:852191 GeneID:856853 GeneID:856858 KEGG:sce:YBL087C
KEGG:sce:YER117W KEGG:sce:YER121W KO:K02894 NextBio:970670
ProteinModelPortal:P0CX42 SMR:P0CX42 CYGD:YER117w
GeneTree:ENSGT00390000004690 ArrayExpress:P0CX42 GermOnline:YER117W
Uniprot:P0CX42
Length = 137
Score = 98 (39.6 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 32/104 (30%), Positives = 46/104 (44%)
Query: 65 VLKVVDNSGAKTVMCIQPLKGR-------KVARLGDTIVASVKEAMPTGXXXXXXXXXXX 117
++ DNSGA+ + I +KG A LGD ++A+VK+ P
Sbjct: 22 IMNCADNSGARNLYIIA-VKGSGSRLNRLPAASLGDMVMATVKKGKPE---LRKKVMPAI 77
Query: 118 XXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
R DG + F+DNA V+ N GE G+ + GPV E
Sbjct: 78 VVRQAKSWRRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKE 121
>MGI|MGI:1333864 [details] [associations]
symbol:Mrpl14 "mitochondrial ribosomal protein L14"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238 MGI:MGI:1333864
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.150.20 SUPFAM:SSF50193 PROSITE:PS00049 CTD:64928
eggNOG:NOG331407 GeneTree:ENSGT00390000001121 HOGENOM:HOG000183701
HOVERGEN:HBG088508 OMA:ALGNTPY OrthoDB:EOG4CRM1C EMBL:AK003500
EMBL:AK050273 EMBL:AK144153 EMBL:BC027021 IPI:IPI00133778
RefSeq:NP_081008.1 UniGene:Mm.379158 ProteinModelPortal:Q9D1I6
SMR:Q9D1I6 STRING:Q9D1I6 PhosphoSite:Q9D1I6 PaxDb:Q9D1I6
PRIDE:Q9D1I6 Ensembl:ENSMUST00000024734 GeneID:68463 KEGG:mmu:68463
UCSC:uc008crj.1 InParanoid:Q9D1I6 NextBio:327214 Bgee:Q9D1I6
CleanEx:MM_MRPL14 Genevestigator:Q9D1I6
GermOnline:ENSMUSG00000023939 Uniprot:Q9D1I6
Length = 145
Score = 99 (39.9 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 36/127 (28%), Positives = 60/127 (47%)
Query: 60 IQMRTVLKVVDNS--GA----KTVMCIQPLKGRKVARLGDTIVASVKEAMPTGXXXXXXX 113
+Q T ++VVDNS G+ + CI V ++GD I+ +++
Sbjct: 32 VQKMTRVRVVDNSALGSTPYHRPPRCIHVYNKSGVGKVGDQILLAIR------------- 78
Query: 114 XXXXXXXXXMQHGRFDGSEV--RFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKK--HVS 169
+ H R GS + +FD N VVL+ G P GTR+ P+P LRR++ +
Sbjct: 79 -GQKKKALIVGH-RMPGSRMTPKFDSNNVVLIEDNGNPVGTRIKIPIPTSLRRREGEYSK 136
Query: 170 ILTLAEH 176
+L +A++
Sbjct: 137 VLAIAQN 143
>RGD|1306240 [details] [associations]
symbol:Mrpl14 "mitochondrial ribosomal protein L14"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 RGD:1306240 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.150.20 SUPFAM:SSF50193 PROSITE:PS00049
CTD:64928 eggNOG:NOG331407 GeneTree:ENSGT00390000001121
HOGENOM:HOG000183701 HOVERGEN:HBG088508 OMA:ALGNTPY
OrthoDB:EOG4CRM1C EMBL:AABR03068353 IPI:IPI00870496 PIR:S78418
RefSeq:NP_001100360.1 RefSeq:NP_001258060.1 UniGene:Rn.35669
ProteinModelPortal:Q7M0E7 STRING:Q7M0E7 PRIDE:Q7M0E7
Ensembl:ENSRNOT00000026716 GeneID:301250 KEGG:rno:301250
UCSC:RGD:1306240 InParanoid:Q7M0E7 NextBio:648389
Genevestigator:Q7M0E7 GermOnline:ENSRNOG00000019734 Uniprot:Q7M0E7
Length = 145
Score = 99 (39.9 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 36/127 (28%), Positives = 58/127 (45%)
Query: 60 IQMRTVLKVVDNSGA------KTVMCIQPLKGRKVARLGDTIVASVKEAMPTGXXXXXXX 113
IQ T ++VVDNS + CI V ++GD I+ +++
Sbjct: 32 IQKMTRVRVVDNSALGNTPYHRPPRCIHVYNKSGVGKVGDQILLAIR------------- 78
Query: 114 XXXXXXXXXMQHGRFDGSEV--RFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKK--HVS 169
+ H R GS + +FD N VVL+ G P GTR+ P+P LRR++ +
Sbjct: 79 -GQKKKALIVGH-RMPGSRMTPKFDSNNVVLIEDNGNPVGTRIKIPIPTSLRRREGEYSK 136
Query: 170 ILTLAEH 176
+L +A++
Sbjct: 137 VLAIAQN 143
>RGD|2318559 [details] [associations]
symbol:LOC100362226 "ribosomal protein L23-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000218
InterPro:IPR023571 Pfam:PF00238 RGD:2318559 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.150.20 PANTHER:PTHR11761
SUPFAM:SSF50193 GeneTree:ENSGT00390000004690 IPI:IPI00388644
Ensembl:ENSRNOT00000032589 Uniprot:F1LWL3
Length = 140
Score = 98 (39.6 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 28/108 (25%), Positives = 53/108 (49%)
Query: 60 IQMRTVLKVVDNSGAKTV--MCIQPLKGR----KVARLGDTIVASVKEAMPTGXXXXXXX 113
+Q+ V+ D++G K V + ++ +KGR A +G ++A+V+++ P
Sbjct: 20 LQVGAVINRADSTGTKNVYIISVKEIKGRLDRLPAAGVGHMVMATVQKSRPQ---LRKKV 76
Query: 114 XXXXXXXXXMQHGRFDGSEVRFDDNAVVLVNKAGEPTGTRVFGPVPHE 161
GR DG + F+++A V+VN G+ G+ + GP+ E
Sbjct: 77 HPAMVIRQQKSCGRKDGVSLYFEEDAEVIVNNKGKMKGSAITGPIAKE 124
>UNIPROTKB|J9NW30 [details] [associations]
symbol:MRPL14 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.150.20 SUPFAM:SSF50193 CTD:64928
GeneTree:ENSGT00390000001121 OMA:ALGNTPY EMBL:AAEX03008352
RefSeq:XP_532153.1 ProteinModelPortal:J9NW30
Ensembl:ENSCAFT00000046026 GeneID:474918 KEGG:cfa:474918
Uniprot:J9NW30
Length = 145
Score = 97 (39.2 bits), Expect = 0.00017, P = 0.00017
Identities = 36/127 (28%), Positives = 57/127 (44%)
Query: 60 IQMRTVLKVVDNSGA------KTVMCIQPLKGRKVARLGDTIVASVKEAMPTGXXXXXXX 113
IQ T ++VVDNS + CI V ++GD I+ ++K
Sbjct: 32 IQKMTRVRVVDNSALGNTPYHRPPRCIHVYNKSGVGKVGDRILLAIK------------- 78
Query: 114 XXXXXXXXXMQHGRFDGSEV--RFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKK--HVS 169
+ H R G ++ RFD N VVL+ G P GTR+ P+P LR+++
Sbjct: 79 -GQKKKALIVGH-RMPGPQMTPRFDSNNVVLIEDNGNPVGTRIKTPIPTSLRQREGEFSK 136
Query: 170 ILTLAEH 176
+L +A++
Sbjct: 137 VLAIAQN 143
>UNIPROTKB|Q1JQ99 [details] [associations]
symbol:MRPL14 "39S ribosomal protein L14, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.150.20 SUPFAM:SSF50193 PROSITE:PS00049 EMBL:BC116124
IPI:IPI00699615 RefSeq:NP_001069805.1 UniGene:Bt.15953
ProteinModelPortal:Q1JQ99 STRING:Q1JQ99 PRIDE:Q1JQ99
Ensembl:ENSBTAT00000015619 GeneID:614579 KEGG:bta:614579 CTD:64928
eggNOG:NOG331407 GeneTree:ENSGT00390000001121 HOGENOM:HOG000183701
HOVERGEN:HBG088508 InParanoid:Q1JQ99 OMA:ALGNTPY OrthoDB:EOG4CRM1C
NextBio:20899173 Uniprot:Q1JQ99
Length = 145
Score = 95 (38.5 bits), Expect = 0.00042, P = 0.00042
Identities = 36/127 (28%), Positives = 56/127 (44%)
Query: 60 IQMRTVLKVVDNSGA------KTVMCIQPLKGRKVARLGDTIVASVKEAMPTGXXXXXXX 113
IQ T ++VVDNS + CI V ++GD I+ ++K
Sbjct: 32 IQKMTRVRVVDNSALGNTPYHRPPRCIHVYNKNGVGKVGDRILLAIK------------- 78
Query: 114 XXXXXXXXXMQHGRFDGSEV--RFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKK--HVS 169
+ H R G + RFD N VVL+ G P GTR+ P+P LR+++
Sbjct: 79 -GQKKKALIVGH-RMPGPTMTPRFDSNNVVLIEDNGNPVGTRIKTPIPTSLRQREGEFSK 136
Query: 170 ILTLAEH 176
+L +A++
Sbjct: 137 VLAIAQN 143
>UNIPROTKB|F1RQV7 [details] [associations]
symbol:MRPL14 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.150.20
SUPFAM:SSF50193 GeneTree:ENSGT00390000001121 OMA:ALGNTPY
EMBL:CR956360 RefSeq:XP_001929596.1 RefSeq:XP_001929599.1
UniGene:Ssc.19634 Ensembl:ENSSSCT00000001895 GeneID:100157118
KEGG:ssc:100157118 Uniprot:F1RQV7
Length = 145
Score = 95 (38.5 bits), Expect = 0.00042, P = 0.00042
Identities = 36/127 (28%), Positives = 56/127 (44%)
Query: 60 IQMRTVLKVVDNSGAKTV------MCIQPLKGRKVARLGDTIVASVKEAMPTGXXXXXXX 113
IQ T ++VVDNS T CI V ++GD I+ +++
Sbjct: 32 IQKMTRVRVVDNSALGTTPYHRPPRCIHVYNKTGVGKVGDRILLAIR------------- 78
Query: 114 XXXXXXXXXMQHGRFDGSEV--RFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKK--HVS 169
+ H R G + RFD N VVL+ G P GTR+ P+P LR+++
Sbjct: 79 -GQKKKALIVGH-RMPGPRMTPRFDSNNVVLLEDNGNPVGTRIKTPIPSSLRQREGEFSK 136
Query: 170 ILTLAEH 176
+L +A++
Sbjct: 137 VLAIAQN 143
>ZFIN|ZDB-GENE-040426-1066 [details] [associations]
symbol:mrpl14 "mitochondrial ribosomal protein
L14" species:7955 "Danio rerio" [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 ZFIN:ZDB-GENE-040426-1066 GO:GO:0005739 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.150.20 SUPFAM:SSF50193
PROSITE:PS00049 HSSP:P04450 CTD:64928 eggNOG:NOG331407
GeneTree:ENSGT00390000001121 HOGENOM:HOG000183701
HOVERGEN:HBG088508 OMA:ALGNTPY OrthoDB:EOG4CRM1C EMBL:BC049041
IPI:IPI00487696 RefSeq:NP_957441.1 UniGene:Dr.117646
UniGene:Dr.85340 ProteinModelPortal:Q7ZUH5 STRING:Q7ZUH5
PRIDE:Q7ZUH5 Ensembl:ENSDART00000099782 GeneID:394122
KEGG:dre:394122 InParanoid:Q7ZUH5 NextBio:20815075
ArrayExpress:Q7ZUH5 Bgee:Q7ZUH5 Uniprot:Q7ZUH5
Length = 141
Score = 93 (37.8 bits), Expect = 0.00069, P = 0.00069
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 134 RFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKK--HVSILTLAE 175
RFD N VVL+ G PTGTR+ P+P LR+ + + +L +A+
Sbjct: 95 RFDSNNVVLIEDNGNPTGTRIKAPLPTHLRKLEGEYSKLLAIAQ 138
>UNIPROTKB|E1C7I2 [details] [associations]
symbol:MRPL14 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.150.20
SUPFAM:SSF50193 GeneTree:ENSGT00390000001121 OMA:ALGNTPY
EMBL:AADN02011886 IPI:IPI00602239 PRIDE:E1C7I2
Ensembl:ENSGALT00000016736 NextBio:20824211 Uniprot:E1C7I2
Length = 146
Score = 93 (37.8 bits), Expect = 0.00094, P = 0.00094
Identities = 34/115 (29%), Positives = 51/115 (44%)
Query: 60 IQMRTVLKVVDNSGA------KTVMCIQPLKGRKVARLGDTIVASVKEAMPTGXXXXXXX 113
IQ T ++VVDNS + CI V ++GD I+ ++K
Sbjct: 33 IQKLTRVRVVDNSALGNAPYHRPPKCIHVYNKTGVGKVGDKILLAIK------------- 79
Query: 114 XXXXXXXXXMQHGRFDGSEV--RFDDNAVVLVNKAGEPTGTRVFGPVPHELRRKK 166
+ H + G + RFD N VVL+ G P GTR+ P+P+ LRR++
Sbjct: 80 -GEKKKALIVGH-KMPGPHMTPRFDSNNVVLIEDNGNPLGTRIKTPIPYILRRRE 132
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.138 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 178 143 0.00091 102 3 11 22 0.38 31
30 0.48 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 59
No. of states in DFA: 558 (59 KB)
Total size of DFA: 131 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.22u 0.18s 10.40t Elapsed: 00:00:01
Total cpu time: 10.22u 0.18s 10.40t Elapsed: 00:00:01
Start: Fri May 10 22:18:48 2013 End: Fri May 10 22:18:49 2013