Query 030372
Match_columns 178
No_of_seqs 117 out of 1462
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 20:41:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030372.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030372hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i7u_A AP4A hydrolase; nudix p 99.9 3.1E-26 1.1E-30 165.0 16.4 128 22-164 3-132 (134)
2 3u53_A BIS(5'-nucleosyl)-tetra 99.9 4.2E-25 1.5E-29 162.1 16.6 139 24-164 4-145 (155)
3 1ktg_A Diadenosine tetraphosph 99.9 2.8E-23 9.5E-28 148.8 18.7 131 22-162 2-136 (138)
4 2pbt_A AP4A hydrolase; nudix p 99.9 1.2E-22 4.2E-27 144.5 16.3 126 23-163 4-131 (134)
5 3son_A Hypothetical nudix hydr 99.9 2.4E-22 8.4E-27 146.0 17.5 133 23-164 5-144 (149)
6 1vcd_A NDX1; nudix protein, di 99.9 9.3E-22 3.2E-26 138.7 15.5 122 24-161 3-124 (126)
7 3i9x_A MUTT/nudix family prote 99.9 1.2E-22 4E-27 153.6 11.0 139 21-167 25-178 (187)
8 3fcm_A Hydrolase, nudix family 99.9 8.5E-22 2.9E-26 150.0 13.6 140 21-171 43-194 (197)
9 2b0v_A Nudix hydrolase; struct 99.9 3.8E-21 1.3E-25 139.8 16.3 111 47-157 20-136 (153)
10 2yyh_A MUTT domain, 8-OXO-DGTP 99.9 1.7E-21 6E-26 139.9 13.3 127 21-159 7-136 (139)
11 4dyw_A MUTT/nudix family prote 99.9 1.8E-21 6.2E-26 143.0 13.3 124 21-157 27-153 (157)
12 2o1c_A DATP pyrophosphohydrola 99.9 3.3E-21 1.1E-25 139.3 14.2 128 23-161 9-149 (150)
13 3gz5_A MUTT/nudix family prote 99.9 1.1E-21 3.6E-26 154.3 11.9 137 21-165 20-160 (240)
14 3gwy_A Putative CTP pyrophosph 99.9 6E-21 2.1E-25 137.3 13.9 122 22-159 5-131 (140)
15 3grn_A MUTT related protein; s 99.9 1.7E-20 5.7E-25 136.9 15.5 126 21-160 6-136 (153)
16 1sjy_A MUTT/nudix family prote 99.9 1.1E-20 3.9E-25 138.1 14.4 135 21-167 11-155 (159)
17 3q1p_A Phosphohydrolase (MUTT/ 99.9 1.3E-21 4.5E-26 150.1 9.5 133 21-167 66-201 (205)
18 3id9_A MUTT/nudix family prote 99.9 2.3E-21 8E-26 143.9 10.4 125 21-159 21-150 (171)
19 2azw_A MUTT/nudix family prote 99.9 2E-20 6.8E-25 135.2 14.8 124 22-158 17-144 (148)
20 2fb1_A Conserved hypothetical 99.9 1E-21 3.5E-26 153.1 8.5 133 21-163 11-145 (226)
21 3gg6_A Nudix motif 18, nucleos 99.9 2.7E-21 9.1E-26 141.5 10.1 116 47-167 33-153 (156)
22 3fjy_A Probable MUTT1 protein; 99.9 8.7E-21 3E-25 157.1 14.0 142 23-165 3-179 (364)
23 3shd_A Phosphatase NUDJ; nudix 99.9 2.6E-20 8.9E-25 135.7 14.9 107 22-141 4-112 (153)
24 3f6a_A Hydrolase, nudix family 99.8 4.7E-21 1.6E-25 140.8 10.9 126 21-160 4-150 (159)
25 3q93_A 7,8-dihydro-8-oxoguanin 99.8 9.3E-21 3.2E-25 142.0 12.4 111 47-159 37-149 (176)
26 3exq_A Nudix family hydrolase; 99.8 3.3E-21 1.1E-25 142.2 9.7 126 22-159 9-136 (161)
27 1k2e_A Nudix homolog; nudix/MU 99.8 2.1E-21 7.2E-26 142.5 8.6 122 24-165 2-140 (156)
28 3o8s_A Nudix hydrolase, ADP-ri 99.8 5.1E-21 1.7E-25 147.0 10.6 132 21-167 68-202 (206)
29 2fvv_A Diphosphoinositol polyp 99.8 1.4E-20 4.8E-25 143.4 11.7 119 16-147 33-153 (194)
30 3cng_A Nudix hydrolase; struct 99.8 2.7E-20 9.4E-25 140.9 13.1 130 21-167 38-170 (189)
31 1rya_A GDP-mannose mannosyl hy 99.8 5.5E-20 1.9E-24 134.6 14.3 125 21-156 16-151 (160)
32 3fk9_A Mutator MUTT protein; s 99.8 1.4E-20 4.8E-25 142.6 11.2 124 23-160 4-130 (188)
33 2rrk_A ORF135, CTP pyrophospho 99.8 1.6E-19 5.5E-24 129.2 14.9 110 47-160 21-133 (140)
34 2fkb_A Putative nudix hydrolas 99.8 3.5E-19 1.2E-23 133.2 16.8 130 21-164 35-171 (180)
35 2w4e_A MUTT/nudix family prote 99.8 1.3E-19 4.3E-24 131.5 13.4 114 22-148 4-121 (145)
36 3ees_A Probable pyrophosphohyd 99.8 7.8E-20 2.7E-24 132.6 12.1 112 47-162 34-148 (153)
37 3h95_A Nucleoside diphosphate- 99.8 2.2E-19 7.6E-24 136.9 14.4 121 21-151 24-147 (199)
38 3r03_A Nudix hydrolase; struct 99.8 7.5E-20 2.6E-24 131.7 10.9 111 47-161 21-136 (144)
39 2jvb_A Protein PSU1, mRNA-deca 99.8 4.6E-20 1.6E-24 133.3 9.5 126 25-164 6-139 (146)
40 3oga_A Nucleoside triphosphata 99.8 1.4E-19 4.8E-24 133.5 12.3 109 47-156 40-161 (165)
41 2b06_A MUTT/nudix family prote 99.8 1.5E-19 5E-24 131.9 12.1 128 21-159 6-134 (155)
42 1f3y_A Diadenosine 5',5'''-P1, 99.8 5.5E-20 1.9E-24 135.0 9.6 132 20-163 11-163 (165)
43 3hhj_A Mutator MUTT protein; n 99.8 1.1E-19 3.8E-24 133.2 11.2 111 47-161 42-157 (158)
44 2pqv_A MUTT/nudix family prote 99.8 8.4E-20 2.9E-24 133.2 9.9 119 21-154 17-140 (154)
45 3eds_A MUTT/nudix family prote 99.8 3.8E-20 1.3E-24 135.3 7.7 112 22-146 20-137 (153)
46 1hzt_A Isopentenyl diphosphate 99.8 4.4E-19 1.5E-23 134.1 13.1 130 22-163 31-175 (190)
47 2kdv_A RNA pyrophosphohydrolas 99.8 3.3E-19 1.1E-23 132.1 11.9 129 21-161 6-155 (164)
48 1vk6_A NADH pyrophosphatase; 1 99.8 2.6E-19 9E-24 142.8 11.8 113 47-163 152-266 (269)
49 2qjt_B Nicotinamide-nucleotide 99.8 6E-19 2.1E-23 144.9 14.1 131 21-163 206-350 (352)
50 1v8y_A ADP-ribose pyrophosphat 99.8 6.1E-19 2.1E-23 131.0 12.8 115 22-151 33-151 (170)
51 2fml_A MUTT/nudix family prote 99.8 2.6E-19 8.8E-24 143.1 11.3 115 21-144 37-157 (273)
52 2yvp_A NDX2, MUTT/nudix family 99.8 2.8E-19 9.7E-24 134.1 10.8 117 21-150 39-160 (182)
53 3f13_A Putative nudix hydrolas 99.8 2.4E-19 8.3E-24 133.0 10.2 106 47-163 28-133 (163)
54 2qjo_A Bifunctional NMN adenyl 99.8 4.1E-19 1.4E-23 145.1 12.4 128 21-160 201-340 (341)
55 3e57_A Uncharacterized protein 99.8 6E-19 2.1E-23 135.8 10.5 130 21-163 65-209 (211)
56 2a6t_A SPAC19A8.12; alpha/beta 99.8 3.5E-19 1.2E-23 142.3 8.2 132 23-167 101-244 (271)
57 1mk1_A ADPR pyrophosphatase; n 99.8 3.1E-18 1.1E-22 131.4 13.3 114 23-149 43-163 (207)
58 1nqz_A COA pyrophosphatase (MU 99.8 1.3E-18 4.5E-23 131.8 10.8 115 21-146 32-153 (194)
59 1q27_A Putative nudix hydrolas 99.8 6.9E-18 2.4E-22 125.1 13.9 125 23-162 34-168 (171)
60 1vhz_A ADP compounds hydrolase 99.8 1.6E-18 5.6E-23 132.3 10.3 102 47-150 61-166 (198)
61 3o6z_A GDP-mannose pyrophospha 99.8 2.4E-18 8.3E-23 130.5 10.7 116 23-151 45-173 (191)
62 1mut_A MUTT, nucleoside tripho 99.8 1.6E-19 5.5E-24 127.3 3.1 107 47-157 17-126 (129)
63 3q91_A Uridine diphosphate glu 99.8 5.5E-18 1.9E-22 131.4 10.8 92 58-151 95-195 (218)
64 1g0s_A Hypothetical 23.7 kDa p 99.7 7.4E-18 2.5E-22 129.6 10.3 116 23-150 57-185 (209)
65 1x51_A A/G-specific adenine DN 99.7 2.7E-17 9.3E-22 120.1 12.9 126 22-159 18-148 (155)
66 2dsc_A ADP-sugar pyrophosphata 99.7 1.1E-17 3.8E-22 128.8 10.8 114 24-146 62-185 (212)
67 1q33_A Pyrophosphatase, ADP-ri 99.7 7.2E-17 2.4E-21 130.1 10.9 138 22-162 109-278 (292)
68 1u20_A U8 snoRNA-binding prote 99.6 6.1E-16 2.1E-20 119.1 9.3 118 21-143 31-164 (212)
69 3fsp_A A/G-specific adenine gl 99.6 1.2E-15 4.2E-20 126.6 10.4 109 47-163 253-364 (369)
70 2dho_A Isopentenyl-diphosphate 99.6 2.6E-14 8.9E-19 111.8 15.7 114 21-146 57-192 (235)
71 3qsj_A Nudix hydrolase; struct 99.6 1.1E-14 3.8E-19 113.7 12.8 117 21-145 6-189 (232)
72 2pny_A Isopentenyl-diphosphate 99.6 2.6E-14 8.8E-19 112.6 14.5 128 20-159 67-225 (246)
73 3dup_A MUTT/nudix family prote 99.5 2.5E-13 8.7E-18 109.5 16.3 120 20-147 115-245 (300)
74 2xsq_A U8 snoRNA-decapping enz 99.5 6E-14 2E-18 108.5 10.4 117 47-167 66-203 (217)
75 3rh7_A Hypothetical oxidoreduc 99.5 2.3E-14 7.9E-19 116.8 8.4 117 22-167 182-300 (321)
76 3kvh_A Protein syndesmos; NUDT 99.3 8.5E-12 2.9E-16 93.8 8.4 93 21-120 19-115 (214)
77 3bho_A Cleavage and polyadenyl 99.3 1.4E-11 4.9E-16 93.4 8.7 96 44-143 71-184 (208)
78 1vig_A Vigilin; RNA-binding pr 29.0 24 0.00084 21.1 1.5 16 77-92 26-41 (71)
79 3vej_A Ubiquitin-like protein 27.2 46 0.0016 18.1 2.2 29 136-164 6-36 (41)
80 2bsj_A Chaperone protein SYCT; 26.7 60 0.002 21.8 3.1 31 148-178 98-129 (133)
81 2ctk_A Vigilin; K homology typ 21.8 38 0.0013 22.0 1.5 17 76-92 37-53 (104)
82 2opv_A KHSRP protein; KH domai 20.2 44 0.0015 20.7 1.5 17 76-92 34-50 (85)
No 1
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.94 E-value=3.1e-26 Score=165.00 Aligned_cols=128 Identities=24% Similarity=0.342 Sum_probs=100.7
Q ss_pred ceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEee
Q 030372 22 RRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNFL 101 (178)
Q Consensus 22 ~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~~ 101 (178)
.+.+||+|+++.+ +|||+++++ +.|.||||++++|||+.+||+||++||||+.+....+++.+.+.
T Consensus 3 ~~~aag~vv~~~~------------~vLL~~r~~--g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~~~l~~~~~~ 68 (134)
T 3i7u_A 3 KEFSAGGVLFKDG------------EVLLIKTPS--NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIHYW 68 (134)
T ss_dssp EEEEEEEEEEETT------------EEEEEECTT--SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEE
T ss_pred cEEEEEEEEEECC------------EEEEEEeCC--CcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEeeeeeeeeEE
Confidence 3568999998766 899998654 78999999999999999999999999999999888877776554
Q ss_pred ecCCCc--EEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHHHHhcc
Q 030372 102 SKSRGT--FYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVERLSSR 164 (178)
Q Consensus 102 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~ 164 (178)
+...+. ....++|.+...... ..+++|+.++.|++++++.+++.++..++++.++++.+.+.
T Consensus 69 ~~~~~~~~~~~~~~f~~~~~~~~-~~~~~E~~~~~W~~~~e~~~~l~~~~~r~il~~a~~l~~k~ 132 (134)
T 3i7u_A 69 YTLKGERIFKTVKYYLMKYKEGE-PRPSWEVKDAKFFPIKEAKKLLKYKGDKEIFEKALKLKEKF 132 (134)
T ss_dssp EEETTEEEEEEEEEEEEEEEEEC-CCCCTTSSEEEEEEHHHHHHHBCSHHHHHHHHHHHHHHHHH
T ss_pred ecCCCceEEEEEEEEEEEEcCCc-CcCChhheEEEEEEHHHHhhhcCChHHHHHHHHHHHHHHcc
Confidence 433332 233455666554433 34556888999999999999999999999999888766543
No 2
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.93 E-value=4.2e-25 Score=162.13 Aligned_cols=139 Identities=23% Similarity=0.201 Sum_probs=102.7
Q ss_pred EEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEeee-
Q 030372 24 QVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNFLS- 102 (178)
Q Consensus 24 ~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~~~- 102 (178)
.+||+|+|+..... ...++..+|||+++++.++.|.||||++++|||+.+||+||++||||+.+.....+..+.+..
T Consensus 4 ra~G~iifr~~~~~--~~~n~~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~ 81 (155)
T 3u53_A 4 RACGLIIFRRCLIP--KVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELN 81 (155)
T ss_dssp CEEEEEEEEECCCS--SSSSCSEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEE
T ss_pred eEeEEEEEcccccc--ceeCCCcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCCccccceeeeeEeeeee
Confidence 36899999864210 122577899999988766889999999999999999999999999999987766555443221
Q ss_pred -cCCCcEEEEEEEEEEeccc-cccCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHHHHhcc
Q 030372 103 -KSRGTFYEGYMFPLLVTEQ-LELWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVERLSSR 164 (178)
Q Consensus 103 -~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~ 164 (178)
..........+|.+..... ....+++|..+++|++++++.+++.++.++.+|.++.+.|.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~ea~~~~~~~~~~~~L~~a~~~L~~~ 145 (155)
T 3u53_A 82 YVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQFKEMKAALQEGHQFLCSI 145 (155)
T ss_dssp EEETTEEEEEEEEEEEESCTTCCCCCCTTEEEEEEECHHHHHHHHCSHHHHHHHHHHHHHHHHH
T ss_pred cCCCcceeEEEEEEEEEeccCCccCCCcceeEEEEeEHHHHHHHcCCHHHHHHHHHHHHHHhCc
Confidence 1122233334455555432 3344556889999999999999999999999999888877653
No 3
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.92 E-value=2.8e-23 Score=148.76 Aligned_cols=131 Identities=19% Similarity=0.170 Sum_probs=100.0
Q ss_pred ceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccc----eeeeE
Q 030372 22 RRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVE----HELGK 97 (178)
Q Consensus 22 ~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~----~~~~~ 97 (178)
.+.+|++|+++.+ ++..+|||++++..++.|.+|||++++|||+.+||+||++||||+.+... .++..
T Consensus 2 ~~~~~~~vi~~~~--------~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~ 73 (138)
T 1ktg_A 2 VVKAAGLVIYRKL--------AGKIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHET 73 (138)
T ss_dssp CEEEEEEEEEEEE--------TTEEEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEE
T ss_pred ceEEEEEEEEEec--------CCCcEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccceEEeccccce
Confidence 3567889999875 34568999998754469999999999999999999999999999964433 34444
Q ss_pred EEeeecCCCcEEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHHHHh
Q 030372 98 WNFLSKSRGTFYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVERLS 162 (178)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~ 162 (178)
+.|... .......+|.+.........+..|..++.|++++++.+++..+.++.++..+.++++
T Consensus 74 ~~~~~~--~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~ 136 (138)
T 1ktg_A 74 LFYEAK--GKPKSVKYWLAKLNNPDDVQLSHEHQNWKWCELEDAIKIADYAEMGSLLRKFSAFLA 136 (138)
T ss_dssp EEEEET--TEEEEEEEEEEEECSCCCCCCCTTEEEEEEECHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred EEEEeC--CCceEEEEEEEEecCCcccCCCchhcEeEeccHHHHHHhhccchHHHHHHHHHHHhh
Confidence 444443 233455677776654333345567889999999999999988999999999888774
No 4
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.90 E-value=1.2e-22 Score=144.53 Aligned_cols=126 Identities=25% Similarity=0.352 Sum_probs=98.5
Q ss_pred eEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEeee
Q 030372 23 RQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNFLS 102 (178)
Q Consensus 23 r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~~~ 102 (178)
..+|++|+++.+ +|||+++.+ +.|.||||+++.|||+.+||+||++||||+.+....+++.+.+..
T Consensus 4 ~~~~~~vi~~~~------------~vLl~~r~~--~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~ 69 (134)
T 2pbt_A 4 EFSAGGVLFKDG------------EVLLIKTPS--NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWY 69 (134)
T ss_dssp EEEEEEEEEETT------------EEEEEECTT--SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEE
T ss_pred ceEEEEEEEECC------------EEEEEEeCC--CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEeeeeeEEEEEe
Confidence 456778887644 899998765 899999999999999999999999999999988877777765554
Q ss_pred cCCCc--EEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHHHHhc
Q 030372 103 KSRGT--FYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVERLSS 163 (178)
Q Consensus 103 ~~~~~--~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~ 163 (178)
...+. ....++|.+........ +.+|..++.|++++++.+++..+.++.++..+++.+.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~~ 131 (134)
T 2pbt_A 70 TLKGERIFKTVKYYLMKYKEGEPR-PSWEVKDAKFFPIKEAKKLLKYKGDKEIFEKALKLKEK 131 (134)
T ss_dssp EETTEEEEEEEEEEEEEEEEECCC-CCTTSSEEEEEEHHHHHHHCCSHHHHHHHHHHHHHHHH
T ss_pred eCCCcEEEEEEEEEEEEecCCCcC-CCcceeEEEEEcHHHHHhhhcchhHHHHHHHHHHHhhh
Confidence 43322 23445666665443332 33378899999999999999999999999999888765
No 5
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.90 E-value=2.4e-22 Score=145.97 Aligned_cols=133 Identities=22% Similarity=0.193 Sum_probs=99.6
Q ss_pred eEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccc--eeeeEEEe
Q 030372 23 RQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVE--HELGKWNF 100 (178)
Q Consensus 23 r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~--~~~~~~~~ 100 (178)
+.+|+++++... ++..+|||+++... +.|.+|||++++|||+.+||+||++||||+.+... .....+.+
T Consensus 5 ~~~v~vvi~~~~--------~~~~~vLl~~r~~~-g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~ 75 (149)
T 3son_A 5 PFQVLVIPFIKT--------EANYQFGVLHRTDA-DVWQFVAGGGEDEEAISETAKRESIEELNLDVDVKMYSLDSHASI 75 (149)
T ss_dssp CCEEEEEEEEEC--------SSSEEEEEEEESSS-SCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEEEEE
T ss_pred ceEEEEEEEEec--------CCCeEEEEEEEcCC-CCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEeeecc
Confidence 456778888765 45569999999887 99999999999999999999999999999997764 22222211
Q ss_pred e---ec-CCCcEEEEEEEEEEeccc-cccCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHHHHhcc
Q 030372 101 L---SK-SRGTFYEGYMFPLLVTEQ-LELWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVERLSSR 164 (178)
Q Consensus 101 ~---~~-~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~ 164 (178)
. +. ........++|.+..... .....+.|..++.|++++++.+++..+..+.++..+.+++...
T Consensus 76 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~ 144 (149)
T 3son_A 76 PNFHFSFNKPYVVPEYCFAIDLTSCSYQVTLSLEHSELRWVSYESAIQLLEWDSNKTALYELNERLKNN 144 (149)
T ss_dssp EGGGTCSSSCSEEEEEEEEEECTTTGGGCCCCTTEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHTT
T ss_pred cceeeccCCceEeEEEEEEEEcCCCCCcccCCCceeeEEEeCHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 1 11 112234456777776531 2222346888999999999999999999999999999988765
No 6
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.89 E-value=9.3e-22 Score=138.70 Aligned_cols=122 Identities=29% Similarity=0.306 Sum_probs=95.0
Q ss_pred EEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEeeec
Q 030372 24 QVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNFLSK 103 (178)
Q Consensus 24 ~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~~~~ 103 (178)
.++++++++.+ + +|||++++. +.|.+|||+++.|||+.+||+||++||||+.+....+++.+.+...
T Consensus 3 ~~~~~vi~~~~---------~--~vLl~~r~~--g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~ 69 (126)
T 1vcd_A 3 LGAGGVVFNAK---------R--EVLLLRDRM--GFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVLLPLYPTRYVNP 69 (126)
T ss_dssp EEEEEEEECTT---------S--CEEEEECTT--SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEECT
T ss_pred eEEEEEEEcCC---------C--EEEEEEECC--CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeeccEEeEEEEecC
Confidence 45777887654 2 799998765 7899999999999999999999999999999888788887766653
Q ss_pred CCCcEEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHHHH
Q 030372 104 SRGTFYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVERL 161 (178)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l 161 (178)
. ......+|.+...... ..++.|..++.|++++++.+++..+.++.++..+.+++
T Consensus 70 ~--~~~~~~~~~~~~~~~~-~~~~~e~~~~~w~~~~el~~~~~~~~~~~~l~~~~~~l 124 (126)
T 1vcd_A 70 K--GVEREVHWFLMRGEGA-PRLEEGMTGAGWFSPEEARALLAFPEDLGLLEVALERL 124 (126)
T ss_dssp T--SCEEEEEEEEEEEESC-CCCCTTCCEEEEECHHHHHHHBCSHHHHHHHHHHHHHS
T ss_pred C--ceEEEEEEEEEEcCCC-CCCCcceeeeEEcCHHHHHHhhcChhHHHHHHHHHHhc
Confidence 2 2234455655543332 33456788999999999999998888899998887764
No 7
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.88 E-value=1.2e-22 Score=153.55 Aligned_cols=139 Identities=14% Similarity=0.050 Sum_probs=103.0
Q ss_pred CceEEEEEEEEEeecCCCCCCcCC----CeEEEEEEeeC---------CCCCEEeccccCCCCCCHHHHHHHHHhhhhce
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVD----DIEVLVITSQK---------GSQGMMFPKGGWELDETVKEAALRESFEEAGV 87 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~----~~~vLLv~~~~---------~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl 87 (178)
+.+.+|++++|..+ ++ ..+|||+++.. .++.|.+|||++++|||+.+||+||++||||+
T Consensus 25 p~~~~v~~vv~~~~--------~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEtGl 96 (187)
T 3i9x_A 25 PDGYTSDMILTTVK--------ELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETSL 96 (187)
T ss_dssp CSEEEEEEEEEEEE--------EETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHHCC
T ss_pred cccceEEEEEEEEc--------CCCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHHCC
Confidence 44588999998876 33 46899999832 23889999999999999999999999999999
Q ss_pred eeccceeeeEEEeeecCCCcEEEEEEEEEEeccc--cccCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHHHHhccc
Q 030372 88 MGNVEHELGKWNFLSKSRGTFYEGYMFPLLVTEQ--LELWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVERLSSRV 165 (178)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~~ 165 (178)
.+....+++.+.+............+|.+..... ....+.+|..++.|++++++..+......+.++..+++++++..
T Consensus 97 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~l~~~~~~il~~a~~~l~~~~ 176 (187)
T 3i9x_A 97 TDIPLIPFGVFDKPGRDPRGWIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALELPLAFDHLDMLKKAFSAITEEF 176 (187)
T ss_dssp CSCCCEEEEEECCTTSSTTSSEEEEEEEEECCHHHHHHHHHSTTTTTEEEEEHHHHTTSCBSTTHHHHHHHHHHHHHHHH
T ss_pred CCcceEEEEEEcCCccCCCCCEEEEEEEEEEcCcccCCcCCCCceeEEEEEeHHHcccCCCCccHHHHHHHHHHHHHhhh
Confidence 9888888887665443322223333444433221 12234457788999999999987777788999999999887766
Q ss_pred cc
Q 030372 166 QQ 167 (178)
Q Consensus 166 ~~ 167 (178)
..
T Consensus 177 ~~ 178 (187)
T 3i9x_A 177 LL 178 (187)
T ss_dssp HT
T ss_pred hc
Confidence 43
No 8
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.88 E-value=8.5e-22 Score=150.04 Aligned_cols=140 Identities=13% Similarity=0.176 Sum_probs=92.2
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhcee-eccc-eeeeEE
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVM-GNVE-HELGKW 98 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~-~~~~-~~~~~~ 98 (178)
..+.++++++++.+ ..+|||++++.. +.|.+|||+++.|||+.+||+||++||||+. +... .....+
T Consensus 43 ~~h~~~~~vv~~~~----------~~~vLL~~r~~~-g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~~~ 111 (197)
T 3fcm_A 43 IAHLTSSAFAVNKE----------RNKFLMIHHNIY-NSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAFAL 111 (197)
T ss_dssp SEEEEEEEEEECTT----------SCEEEEEEETTT-TEEECEEEECTTCCBHHHHHHHHHHHHHCCSSCEESCSSCSEE
T ss_pred CccEEEEEEEEECC----------CCEEEEEEecCC-CCEECCccccCCCCCHHHHHHHHHHHHHCCCcccccCCCceEE
Confidence 45667888887654 348999998876 8999999999999999999999999999998 5432 111111
Q ss_pred Eee-ecC----C----CcEEEEEEEEEEeccccc-cCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHHHHhcccccc
Q 030372 99 NFL-SKS----R----GTFYEGYMFPLLVTEQLE-LWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVERLSSRVQQK 168 (178)
Q Consensus 99 ~~~-~~~----~----~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~~~~~ 168 (178)
.+. ... . ...+....|.+....... ..+.+|..++.|++++++.+++..+.++.++..+++++.++.-..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~il~~~~~~l~~~~~~~ 191 (197)
T 3fcm_A 112 DVLTVNGHIKRGKYVSSHLHLNLTYLIECSEDETLMLKEDENSGVMWIPFNEISKYCSEPHMIPIYEKLINKLKTQSKEG 191 (197)
T ss_dssp EEEEECCEEETTEEECCEEEEEEEEEEECCTTSCCCCCC----CEEEEEGGGHHHHCCCGGGHHHHHHHHHHHHC-----
T ss_pred EEeeecCccccCcccCCceeEEEEEEEEeCCCcccCCCcccccceEEccHHHHHhhcCCHHHHHHHHHHHHHHHhccccc
Confidence 111 110 0 111222445555544332 234467888999999999999999999999999999998876554
Q ss_pred ccc
Q 030372 169 EET 171 (178)
Q Consensus 169 ~~~ 171 (178)
.+.
T Consensus 192 ~~~ 194 (197)
T 3fcm_A 192 HHH 194 (197)
T ss_dssp ---
T ss_pred cCc
Confidence 443
No 9
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.87 E-value=3.8e-21 Score=139.84 Aligned_cols=111 Identities=22% Similarity=0.265 Sum_probs=82.0
Q ss_pred EEEEEEeeCC--CCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEeeecCCCcEEEEEEEEEEeccccc-
Q 030372 47 EVLVITSQKG--SQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNFLSKSRGTFYEGYMFPLLVTEQLE- 123 (178)
Q Consensus 47 ~vLLv~~~~~--~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 123 (178)
+|||+++.+. ++.|.||||++++|||+.+||+||++||||+.+....+++.+.+........+..++|.+.......
T Consensus 20 ~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 99 (153)
T 2b0v_A 20 KYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPEVLTGIYHWTCASNGTTYLRFTFSGQVVSFDPD 99 (153)
T ss_dssp EEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEECTT
T ss_pred EEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccceEEEEEEEeCCCCCcEEEEEEEEEEeCCCCCC
Confidence 8999998765 2479999999999999999999999999999988888888776665542334445567766544322
Q ss_pred cCCccceeeeEEEeHHHHHHH---hccchHHHHHHHH
Q 030372 124 LWPEKDVRQRIWMSVAEAREA---CRHGWMKEALDIL 157 (178)
Q Consensus 124 ~~~~~e~~~~~W~~~~el~~~---~~~~~~~~~l~~~ 157 (178)
...+.+..++.|++++++.++ ...+.++.++..+
T Consensus 100 ~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~~~l~~~ 136 (153)
T 2b0v_A 100 RKLDTGIVRAAWFSIDEIRAKQAMHRTPLVMQCIEDY 136 (153)
T ss_dssp SCCCTTEEEEEEEEHHHHHHTGGGBSSTHHHHHHHHH
T ss_pred CCCCCCeeeEEEecHHHHhhhhcccCcHHHHHHHHHH
Confidence 334557889999999999995 2344445554443
No 10
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.87 E-value=1.7e-21 Score=139.88 Aligned_cols=127 Identities=16% Similarity=0.139 Sum_probs=91.4
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeE--EEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEE
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIE--VLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKW 98 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~--vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~ 98 (178)
.++..+++|+++.+ ...+ |||++++..++.|.||||++++|||+.+||+||++||||+.+....+++.+
T Consensus 7 ~p~~~v~~vi~~~~---------~~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~ 77 (139)
T 2yyh_A 7 TPLLATDVIIRLWD---------GENFKGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGLEVRLHKLMGVY 77 (139)
T ss_dssp CCEEEEEEEEEEEE---------TTEEEEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEEEEEE
T ss_pred CCeEEEEEEEEEEc---------CCCcEEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCCCcccceEEEEE
Confidence 46788999998854 2235 999998776566999999999999999999999999999998877777766
Q ss_pred EeeecCCCcEEEEEEEEEEeccccccCCccceeeeEEEeHHHHH-HHhccchHHHHHHHHHH
Q 030372 99 NFLSKSRGTFYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAR-EACRHGWMKEALDILVE 159 (178)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~-~~~~~~~~~~~l~~~~~ 159 (178)
.+............+|.+.... ...+.+|..++.|++++++. +.+..+ .+.++..+++
T Consensus 78 ~~~~~~~~~~~~~~~f~~~~~~--~~~~~~e~~~~~W~~~~el~~~~l~~~-~~~~l~~~l~ 136 (139)
T 2yyh_A 78 SDPERDPRAHVVSVVWIGDAQG--EPKAGSDAKKVKVYRLEEIPLDKLVFD-HKKIILDFLK 136 (139)
T ss_dssp CCTTSCTTSCEEEEEEEEEEES--CCCCCTTEEEEEEECTTSCCGGGBCTT-HHHHHHHHHH
T ss_pred CCCCcCCCceEEEEEEEEecCC--ccCCCCCcceEEEEEHHHCCHhhcCCC-HHHHHHHHHh
Confidence 5543222233445667666622 22345578899999999998 334333 4556655543
No 11
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.87 E-value=1.8e-21 Score=143.04 Aligned_cols=124 Identities=16% Similarity=0.149 Sum_probs=94.1
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCC--CCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEE
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGS--QGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKW 98 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~--~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~ 98 (178)
..+..|++|+++.+ +|||+++.+.+ +.|.||||+++.|||+.+||+||++||||+.+....+++.+
T Consensus 27 ~~~~~v~~vi~~~~------------~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~ 94 (157)
T 4dyw_A 27 QPRVGCGAAIVRDG------------RILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERATLLCVV 94 (157)
T ss_dssp CCEEEEEEEEEETT------------EEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESCEEEEEE
T ss_pred CceeEEEEEEEECC------------EEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccCcEEEEE
Confidence 46778888888744 89999988542 78999999999999999999999999999999888888887
Q ss_pred EeeecCCCcEEEEEEEEEEeccccc-cCCccceeeeEEEeHHHHHHHhccchHHHHHHHH
Q 030372 99 NFLSKSRGTFYEGYMFPLLVTEQLE-LWPEKDVRQRIWMSVAEAREACRHGWMKEALDIL 157 (178)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~ 157 (178)
.+............+|.+....... ....+|..++.|++++++.+ ...+..+.++..+
T Consensus 95 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~-~l~~~~~~~l~~l 153 (157)
T 4dyw_A 95 DHIDAANGEHWVAPVYLAHAFSGEPRVVEPDRHEALGWFALDDLPQ-PLTHATRIALEQV 153 (157)
T ss_dssp EEEETTTTEEEEEEEEEESEEESCCCCSCTTTEEEEEEEETTSCCS-SBCHHHHHHHHHH
T ss_pred EeeccCCCcEEEEEEEEEEEcCCCcccCCCCcEeEEEEECHHHccc-ccCHHHHHHHHHH
Confidence 7666544444455667665543332 23345788999999999988 4455566666554
No 12
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.87 E-value=3.3e-21 Score=139.27 Aligned_cols=128 Identities=18% Similarity=0.119 Sum_probs=91.8
Q ss_pred eEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccc--eeeeEEE-
Q 030372 23 RQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVE--HELGKWN- 99 (178)
Q Consensus 23 r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~--~~~~~~~- 99 (178)
+.+|++++++.+ ..+|||++++..+|.|.+|||+++.|||+.+||+||++||||+.+... .+++...
T Consensus 9 ~~~v~~~i~~~~----------~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~ 78 (150)
T 2o1c_A 9 PVSILVVIYAQD----------TKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRT 78 (150)
T ss_dssp SEEEEEEEEETT----------TCEEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCEEEEEEE
T ss_pred ceEEEEEEEeCC----------CCEEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCCCccccceeEEeeece
Confidence 456778887643 238999998774589999999999999999999999999999997653 3333221
Q ss_pred --e--------eecCCCcEEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHHHH
Q 030372 100 --F--------LSKSRGTFYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVERL 161 (178)
Q Consensus 100 --~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l 161 (178)
| .+.........++|.+........ ...|..++.|++++++.++...+.++.++..+.+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~-~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l 149 (150)
T 2o1c_A 79 VEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQI-VFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINA 149 (150)
T ss_dssp EEEECCGGGGGGBCTTCCEEEEEEEEEEESSCCCC-CCSSSSCEEEEEHHHHHHHCSCHHHHHHHHHHTTC-
T ss_pred eeeeeecccccccCCCCcceEEEEEEEEcCCCCCc-ChhHhhccEeecHHHHHhhhcCHHHHHHHHHHHHhc
Confidence 1 011112234556777766543322 235788899999999999988888888888776543
No 13
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.87 E-value=1.1e-21 Score=154.31 Aligned_cols=137 Identities=17% Similarity=0.168 Sum_probs=102.3
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCC--CCEEeccccCCC--CCCHHHHHHHHHhhhhceeeccceeee
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGS--QGMMFPKGGWEL--DETVKEAALRESFEEAGVMGNVEHELG 96 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~--~~W~lPgG~ve~--gEs~~eaa~REv~EEtGl~~~~~~~~~ 96 (178)
.+...|++|++..+ ++..+|||+++...+ |.|.+|||++++ |||+.+||+||++||||+.+....+++
T Consensus 20 ~p~v~v~~vi~~~~--------~~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~~~l~ 91 (240)
T 3gz5_A 20 AQLLTVDAVLFTYH--------DQQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYIEQLC 91 (240)
T ss_dssp -CEEEEEEEEEEEE--------TTEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEEEEEE
T ss_pred CCccEEEEEEEEEe--------CCCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCCceeeEE
Confidence 35678889998766 456799999988643 789999999999 999999999999999999988788888
Q ss_pred EEEeeecCCCcEEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHHHHhccc
Q 030372 97 KWNFLSKSRGTFYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVERLSSRV 165 (178)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~~ 165 (178)
++...............|.+...........++..++.|++++++.........+.++...+++++.+.
T Consensus 92 ~~~~~~r~~~~~~~~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~~~l~~dh~~il~~a~~rlr~kl 160 (240)
T 3gz5_A 92 TVGNNSRDARGWSVTVCYTALMSYQACQIQIASVSDVKWWPLADVLQMPLAFDHLQLIEQARERLTQKA 160 (240)
T ss_dssp EEEESSSSTTSCEEEEEEEEECCHHHHHHHHTTCTTEEEEEHHHHTTSCCSTTHHHHHHHHHHHHHHHH
T ss_pred EeCCCccCCCceEEEEEEEEEecccccCCCCCcccceEEecHHHcccCCcchhHHHHHHHHHHHHHHhc
Confidence 877654444344445566665544322223457788999999999865444556777777777776543
No 14
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.86 E-value=6e-21 Score=137.32 Aligned_cols=122 Identities=21% Similarity=0.107 Sum_probs=91.4
Q ss_pred ceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCC-----CCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeee
Q 030372 22 RRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKG-----SQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELG 96 (178)
Q Consensus 22 ~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~-----~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~ 96 (178)
...++++|+++.+ +|||+++... ++.|.||||++++|||+.+||+||++||||+.+....+++
T Consensus 5 ~~~~v~~vi~~~~------------~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~ 72 (140)
T 3gwy_A 5 SIEVVAAVIRLGE------------KYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVGEKLL 72 (140)
T ss_dssp CEEEEEEEEEETT------------EEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEE
T ss_pred EEEEEEEEEEeCC------------EEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEeceEEE
Confidence 3455667776633 8999998753 2679999999999999999999999999999988888888
Q ss_pred EEEeeecCCCcEEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHH
Q 030372 97 KWNFLSKSRGTFYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVE 159 (178)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 159 (178)
.+.+.... .....++|.+...... ....|..++.|++++++.++...+..+.+++.+.+
T Consensus 73 ~~~~~~~~--~~~~~~~f~~~~~~~~--~~~~E~~~~~W~~~~el~~~~~~~~~~~il~~~~~ 131 (140)
T 3gwy_A 73 TVHHTYPD--FEITMHAFLCHPVGQR--YVLKEHIAAQWLSTREMAILDWAEADKPIVRKISE 131 (140)
T ss_dssp EEECCCSS--CCEEEEEEEEEECCSC--CCCCSSCEEEEECHHHHTTSCBCGGGHHHHHHHHC
T ss_pred EEEEEeCC--ceEEEEEEEEEecCCc--ccccccceeEeccHHHHhhCCCCcccHHHHHHHHh
Confidence 77665543 2344567777665432 22347788999999999998888888887776553
No 15
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.86 E-value=1.7e-20 Score=136.91 Aligned_cols=126 Identities=17% Similarity=0.124 Sum_probs=95.9
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCC----CCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeee
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKG----SQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELG 96 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~----~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~ 96 (178)
..+.+|++|+++.+ .+|||+++... ++.|.||||+++.|||+.+||+||++||||+.+....+++
T Consensus 6 ~~~~~v~~vi~~~~-----------~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~ 74 (153)
T 3grn_A 6 PYIISVYALIRNEK-----------GEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGDIAG 74 (153)
T ss_dssp CEEEEEEEEEECTT-----------CCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCSEEE
T ss_pred ceEEEEEEEEEcCC-----------CcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecceEEE
Confidence 46777878887543 27999998763 2789999999999999999999999999999988888888
Q ss_pred EEEeeecCCCcEEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHh-ccchHHHHHHHHHHH
Q 030372 97 KWNFLSKSRGTFYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREAC-RHGWMKEALDILVER 160 (178)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~-~~~~~~~~l~~~~~~ 160 (178)
.+.+.... .....++|.+...... .....|..++.|++++++.++. ..+.++.++..+.+.
T Consensus 75 ~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~l~~l~~~ 136 (153)
T 3grn_A 75 QVNFELTE--KKVIAIVFDGGYVVAD-VKLSYEHIEYSWVSLEKILGMETLPAYFRDFFERFDRE 136 (153)
T ss_dssp EEEEECSS--CEEEEEEEEEEECCCC-CCCCTTEEEEEEECHHHHTTCSSSCHHHHHHHHHHHHH
T ss_pred EEEEecCC--ceEEEEEEEEEecCCc-EecCCCcceEEEEEHHHhhhcccchHHHHHHHHHHhcc
Confidence 77665443 2344556666554332 2234678899999999999987 777777777776643
No 16
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.86 E-value=1.1e-20 Score=138.14 Aligned_cols=135 Identities=14% Similarity=0.094 Sum_probs=94.6
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeC------CCCCEEeccccCCCCCCHHHHHHHHHhhhhceeecccee
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQK------GSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHE 94 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~------~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~ 94 (178)
..+..+++|+++.+ .+|||+++.. .++.|.||||+++.|||+.+||+||++||||+.+....+
T Consensus 11 ~~~~~~~~vi~~~~-----------~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~ 79 (159)
T 1sjy_A 11 VELRAAGVVLLNER-----------GDILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPVKF 79 (159)
T ss_dssp CCEEEEEEEEBCTT-----------CCEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEEEE
T ss_pred eEEEeEEEEEEeCC-----------CCEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCccceeeEE
Confidence 34566777776533 2799999874 237899999999999999999999999999999887788
Q ss_pred eeEEEeeecCCCcEEEEEEEEEEecccc-ccC-CccceeeeEEEeHHHHHHHhccchHHH--HHHHHHHHHhccccc
Q 030372 95 LGKWNFLSKSRGTFYEGYMFPLLVTEQL-ELW-PEKDVRQRIWMSVAEAREACRHGWMKE--ALDILVERLSSRVQQ 167 (178)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~e~~~~~W~~~~el~~~~~~~~~~~--~l~~~~~~l~~~~~~ 167 (178)
++.+.+..... ......+|.+...... ... ...|..++.|++++++.+++....++. .+..+.+.++.+..+
T Consensus 80 l~~~~~~~~~~-~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~p 155 (159)
T 1sjy_A 80 LGAYLGRFPDG-VLILRHVWLAEPEPGQTLAPAFTDEIAEASFVSREDFAQLYAAGQIRMYQTKLFYADALREKGFP 155 (159)
T ss_dssp EEEEEEECTTS-CEEEEEEEEEEECSSCCCCCCCCSSEEEEEEECHHHHHHHHHTTCBSCTHHHHHHHHHHHHHTCC
T ss_pred EEEEecccCCC-ceEEEEEEEEEccCCCccccCCCCceeEEEEecHHHHHHhhhcccchhhhhHHHHHHHHhcCCCC
Confidence 87776554332 3455667777665433 222 455788999999999999886544432 222233444444433
No 17
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.86 E-value=1.3e-21 Score=150.13 Aligned_cols=133 Identities=11% Similarity=0.098 Sum_probs=100.9
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEe
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNF 100 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~ 100 (178)
.++..|++++++.+ +|||++++.. |.|.||||++++|||+.+||+||++||||+.+....+++.+.+
T Consensus 66 ~~~~~v~~vv~~~~------------~vLLv~r~~~-g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~~~l~~~~~ 132 (205)
T 3q1p_A 66 TPKVDIRAVVFQNE------------KLLFVKEKSD-GKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHFKLLAIFDK 132 (205)
T ss_dssp CCEEEEEEEEEETT------------EEEEEEC----CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEH
T ss_pred CCcceEEEEEEECC------------EEEEEEEcCC-CcEECCcCccCCCCCHHHHHHHHHHHHHCCccccceEEEEEec
Confidence 45677888888644 8999998766 8999999999999999999999999999999988788887664
Q ss_pred eecC---CCcEEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHHHHhccccc
Q 030372 101 LSKS---RGTFYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVERLSSRVQQ 167 (178)
Q Consensus 101 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~~~~ 167 (178)
.... ........+|.+...... ..++.|..++.|+++++++.+...+.+++.+..+++.+.+...+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~E~~~~~w~~~~el~~l~~~~~~~~~i~~~~~~~~~~~~~ 201 (205)
T 3q1p_A 133 EKHQPSPSATHVYKIFIGCEIIGGE-KKTSIETEEVEFFGENELPNLSIARNTEDQIKEMFAYMKDPQKE 201 (205)
T ss_dssp HHHSCCCCSSCEEEEEEEEEEEEEC-CCCCTTSCCEEEECTTSCCCBCTTTCCHHHHHHHHHHHHCTTSC
T ss_pred cccCCCCCCceEEEEEEEEEecCCc-cCCCCcceEEEEEeHHHhhhcCCCccHHHHHHHHHHHHhCCCCC
Confidence 3221 112333455666554332 33446888999999999999888888999999998888776554
No 18
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.85 E-value=2.3e-21 Score=143.92 Aligned_cols=125 Identities=17% Similarity=0.080 Sum_probs=90.5
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEe
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNF 100 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~ 100 (178)
..+..|++|+++.+ +|||+++...++.|.||||++++|||+.+||+||++||||+.+....++..+.+
T Consensus 21 ~~~~~v~~ii~~~~------------~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~ 88 (171)
T 3id9_A 21 IMQVRVTGILIEDE------------KVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGLEVKIKKLLYVCDK 88 (171)
T ss_dssp -CEEEEEEEEEETT------------EEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEEE
T ss_pred ceEEEEEEEEEECC------------EEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCCccccceEEEEEcc
Confidence 46777777777644 899999887448999999999999999999999999999999887777777665
Q ss_pred eecCCCcEEEEEEEEEEecccccc-----CCccceeeeEEEeHHHHHHHhccchHHHHHHHHHH
Q 030372 101 LSKSRGTFYEGYMFPLLVTEQLEL-----WPEKDVRQRIWMSVAEAREACRHGWMKEALDILVE 159 (178)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 159 (178)
..... .....+|.+........ ....|..++.|++++++.++...+.++.++...+.
T Consensus 89 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~~~~~~l~~~~~ 150 (171)
T 3id9_A 89 PDASP--SLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYYGFSETFINLISGGLA 150 (171)
T ss_dssp TTSSS--CEEEEEEEEEEC-------------CCCCCEEEEETGGGGGGTCCTTCSHHHHHGGG
T ss_pred cCCCC--cEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhCCCCHHHHHHHHHhhc
Confidence 54332 22334455544332221 13357788999999999998888877777776543
No 19
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.85 E-value=2e-20 Score=135.18 Aligned_cols=124 Identities=21% Similarity=0.297 Sum_probs=90.2
Q ss_pred ceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEE-e
Q 030372 22 RRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWN-F 100 (178)
Q Consensus 22 ~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~-~ 100 (178)
.+..+++|+++.. ..+|||+++ .. +.|.||||+++.|||+.+||+||++||||+.+....+++.+. +
T Consensus 17 ~~~~~~~vi~~~~----------~~~vLl~~r-~~-g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~ 84 (148)
T 2azw_A 17 TRYAAYIIVSKPE----------NNTMVLVQA-PN-GAYFLPGGEIEGTETKEEAIHREVLEELGISVEIGCYLGEADEY 84 (148)
T ss_dssp ECCEEEEECEEGG----------GTEEEEEEC-TT-SCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEE
T ss_pred eeeEEEEEEECCC----------CCeEEEEEc-CC-CCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEeeeEEEEEEEE
Confidence 4556777777652 238999986 34 899999999999999999999999999999988777776653 2
Q ss_pred eecCCC-c--EEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhccchHHHHHHHHH
Q 030372 101 LSKSRG-T--FYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACRHGWMKEALDILV 158 (178)
Q Consensus 101 ~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~ 158 (178)
.+.... . ....++|.+...... ..+.+|..++.|++++++.+++..+.++.++..++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~ 144 (148)
T 2azw_A 85 FYSNHRQTAYYNPGYFYVANTWRQL-SEPLERTNTLHWVAPEEAVRLLKRGSHRWAVEKWL 144 (148)
T ss_dssp EEETTTTEEEEEEEEEEEEEEEEEC-SSCC-CCSEEEEECHHHHHHHBSCHHHHHHHHHHH
T ss_pred EcCCCCCcceEEEEEEEEEEcCcCC-cCCCCceeeEEEeeHHHHHhhhcchhHHHHHHHHH
Confidence 222222 2 223455666554332 22345677899999999999998888888888776
No 20
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.85 E-value=1e-21 Score=153.05 Aligned_cols=133 Identities=15% Similarity=0.175 Sum_probs=95.7
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCC--CCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEE
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGS--QGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKW 98 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~--~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~ 98 (178)
.++.+|++|++..+ ++..+|||+++...+ +.|.+|||++++|||+++||+||++||||+.+....+++++
T Consensus 11 ~p~v~v~~vi~~~~--------~~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~l~~~ 82 (226)
T 2fb1_A 11 TFYLGIDCIIFGFN--------EGEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYMEQVGAF 82 (226)
T ss_dssp CEEEEEEEEEEEEE--------TTEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSCEEEEEEEE
T ss_pred CCeEEEEEEEEEEe--------CCCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCCceEEEEEe
Confidence 46788999999765 456699999987643 78999999999999999999999999999998877778777
Q ss_pred EeeecCCCcEEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHHHHhc
Q 030372 99 NFLSKSRGTFYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVERLSS 163 (178)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~ 163 (178)
..........+....|.+.........+.+|..++.|++++++.++... ...++..+++++++
T Consensus 83 ~~~~r~~~~~~v~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~l~~d--h~~il~~a~~rlr~ 145 (226)
T 2fb1_A 83 GAIDRDPGERVVSIAYYALININEYDRELVQKHNAYWVNINELPALIFD--HPEMVDKAREMMKQ 145 (226)
T ss_dssp CCTTSSSSSCEEEEEEEEECCTTSSCHHHHHHTTEEEEETTSCCCBSTT--HHHHHHHHHHHHHH
T ss_pred CCCCcCCCceEEEEEEEEEecCcccccCCccccceEEEEHHHhhhccCC--HHHHHHHHHHHHHh
Confidence 5443332333444456666543322223356788999999999865432 34556655555544
No 21
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.85 E-value=2.7e-21 Score=141.49 Aligned_cols=116 Identities=22% Similarity=0.190 Sum_probs=90.7
Q ss_pred EEEEEEeeCCC--CCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEeeecCCCcEEEEEEEEEEeccccc-
Q 030372 47 EVLVITSQKGS--QGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNFLSKSRGTFYEGYMFPLLVTEQLE- 123 (178)
Q Consensus 47 ~vLLv~~~~~~--~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 123 (178)
+|||+++.+.+ +.|.||||+++.|||+.+||+||++||||+.+....+++.+.... .+..++|.+.......
T Consensus 33 ~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~-----~~~~~~f~~~~~~~~~~ 107 (156)
T 3gg6_A 33 EVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLSVEERGP-----SWVRFVFLARPTGGILK 107 (156)
T ss_dssp EEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEEEEEEESST-----TEEEEEEEEEEEEECCC
T ss_pred EEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEeeeEEEEEcCCC-----CEEEEEEEEEeeCCeec
Confidence 89999988742 889999999999999999999999999999998887777654321 1234566665533221
Q ss_pred --cCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHHHHhccccc
Q 030372 124 --LWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVERLSSRVQQ 167 (178)
Q Consensus 124 --~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~~~~ 167 (178)
..+++|..++.|++++++.+++....++.++..+..+++.+..+
T Consensus 108 ~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~~~~~p 153 (156)
T 3gg6_A 108 TSKEADAESLQAAWYPRTSLPTPLRAHDILHLVELAAQYRQQARHP 153 (156)
T ss_dssp CGGGCSSSCSEEEEEETTSCCSSBSCTHHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCCcceeeeEEEcHHHCcccccchhHHHHHHHHHHHhhcCCCc
Confidence 12445788999999999999999999999999888888776554
No 22
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.85 E-value=8.7e-21 Score=157.14 Aligned_cols=142 Identities=26% Similarity=0.355 Sum_probs=101.8
Q ss_pred eEEEEEEEEEeecC-----CCC---CC----cCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeec
Q 030372 23 RQVVGCVPYRYKTG-----DGA---GN----VVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGN 90 (178)
Q Consensus 23 r~~~g~i~~~~~~~-----~~~---~~----~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~ 90 (178)
..++|+|+|+.... ++. .. .++..+|||++++.. +.|.||||++++|||+.+||+||++||||+.+.
T Consensus 3 ~~aag~i~~r~~~~~~i~~~~~i~~~~~~~i~~~~~~vLLv~r~~~-g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~ 81 (364)
T 3fjy_A 3 LEAAGGIVWRWKAGSDIANDPAIASSKSAQEQLDSIEVCIVHRPKY-DDWSWPKGKLEQNETHRHAAVREIGEETGSPVK 81 (364)
T ss_dssp CCEEEEEEEEECTTSHHHHCGGGGGGSCHHHHHTTEEEEEEEETTT-TEEECCEEECCTTCCHHHHHHHHHHHHHSCCEE
T ss_pred ccccCcEEEEeeccccccCCccccccccccccCCceEEEEEEcCCC-CCEECCcCCCCCCCCHHHHHHHHHHHHhCCeee
Confidence 35789999986410 000 00 135679999999777 899999999999999999999999999999988
Q ss_pred cceeeeEEEeeecCCC-----------cEEEEEEEEEEecccc------------ccCCccceeeeEEEeHHHHHHHhcc
Q 030372 91 VEHELGKWNFLSKSRG-----------TFYEGYMFPLLVTEQL------------ELWPEKDVRQRIWMSVAEAREACRH 147 (178)
Q Consensus 91 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~------------~~~~~~e~~~~~W~~~~el~~~~~~ 147 (178)
...+++.+.|.....+ ......+|.+...... ...+.+|..++.|++++++.+++.+
T Consensus 82 ~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~ 161 (364)
T 3fjy_A 82 LGPYLCEVEYPLSEEGKKTRHSHDCTADTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILSH 161 (364)
T ss_dssp EEEEEEEEC---------------------CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHCSC
T ss_pred eccccceEEEeccCCCcccccccccccCceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHhcc
Confidence 8777777665544221 1233455666554331 1123457889999999999999999
Q ss_pred chHHHHHHHHHHHHhccc
Q 030372 148 GWMKEALDILVERLSSRV 165 (178)
Q Consensus 148 ~~~~~~l~~~~~~l~~~~ 165 (178)
+..+.++..+.++++.+.
T Consensus 162 ~~~r~il~~~~~~l~~g~ 179 (364)
T 3fjy_A 162 STDKDTLAVFVDRVQEGA 179 (364)
T ss_dssp HHHHHHHHHHHHHHHTTG
T ss_pred hhhHHHHHHHHHHhccCC
Confidence 999999999999986644
No 23
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.85 E-value=2.6e-20 Score=135.65 Aligned_cols=107 Identities=24% Similarity=0.339 Sum_probs=80.9
Q ss_pred ceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCC-CCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEe
Q 030372 22 RRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGS-QGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNF 100 (178)
Q Consensus 22 ~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~-~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~ 100 (178)
++.+|++|+.+.+ +|||+++.... +.|.+|||+++.|||+.+||+||++||||+.+....+++.+.+
T Consensus 4 p~~~v~~ii~~~~------------~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~ 71 (153)
T 3shd_A 4 PHVTVACVVHAEG------------KFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIRMHQW 71 (153)
T ss_dssp CEEEEEEEEEETT------------EEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCEEEEEEEE
T ss_pred CceEEEEEEEeCC------------EEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccCcEEEEEEE
Confidence 4556666665433 89999986432 6799999999999999999999999999999988888887766
Q ss_pred eecCCCcEEEEEEEEEEecccc-ccCCccceeeeEEEeHHHH
Q 030372 101 LSKSRGTFYEGYMFPLLVTEQL-ELWPEKDVRQRIWMSVAEA 141 (178)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~W~~~~el 141 (178)
.... ......++|.+...... ......|..++.|++++++
T Consensus 72 ~~~~-~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el 112 (153)
T 3shd_A 72 IAPD-KTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEI 112 (153)
T ss_dssp CCTT-SCCEEEEEEEEECSSCCCCCCCSTTCCEEEEECHHHH
T ss_pred ecCC-CceEEEEEEEEEccccCcCCCCcccceeeEEecHHHh
Confidence 6543 23344567777665443 2334557888999999999
No 24
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.85 E-value=4.7e-21 Score=140.78 Aligned_cols=126 Identities=17% Similarity=0.078 Sum_probs=89.4
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEE--
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKW-- 98 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~-- 98 (178)
..+.+|++|+++.+ +|||+++++. +.|.||||++++|||+.+||+||++||||+.+....+++.+
T Consensus 4 ~~~~~v~~vi~~~~------------~vLL~~r~~~-g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~ 70 (159)
T 3f6a_A 4 NRHFTVSVFIVCKD------------KVLLHLHKKA-KKMLPLGGHIEVNELPEEACIREAKEEAGLNVTLYNPIDINLK 70 (159)
T ss_dssp CSCEEEEEEEEETT------------EEEEEECSSS-CCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEECCCCCHHHH
T ss_pred cceEEEEEEEEECC------------EEEEEEcCCC-CeEECCccCccCCCCHHHHHHHHHHHHhCCCceeccccccccc
Confidence 34667888888744 8999998876 99999999999999999999999999999998766555321
Q ss_pred ------------------EeeecCCCcEEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHh-ccchHHHHHHHHHH
Q 030372 99 ------------------NFLSKSRGTFYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREAC-RHGWMKEALDILVE 159 (178)
Q Consensus 99 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~-~~~~~~~~l~~~~~ 159 (178)
.+... ....+...+|.+...........+|..++.|++++++.++. .....+.+...+..
T Consensus 71 ~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~ 149 (159)
T 3f6a_A 71 KSCDLSGEKLLINPIHTILGDVS-PNHSHIDFVYYATTTSFETSPEIGESKILKWYSKEDLKNAHNIQENILVMATEALD 149 (159)
T ss_dssp HHHHHTTCEEECCCSEEEEECSS-SSSCEEEEEEEEECSCSCCCCCTTSCCCEEEECSSSSTTCSSSCHHHHHHHHHHHH
T ss_pred ccccccccccccCccccccccCC-CCceEEEEEEEEEeCCCCcCCCCCcccceEEeeHHHHhhCcCCChhHHHHHHHHHH
Confidence 01100 11123345677766544433345688899999999999887 44555555555544
Q ss_pred H
Q 030372 160 R 160 (178)
Q Consensus 160 ~ 160 (178)
.
T Consensus 150 ~ 150 (159)
T 3f6a_A 150 L 150 (159)
T ss_dssp H
T ss_pred H
Confidence 4
No 25
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.85 E-value=9.3e-21 Score=142.01 Aligned_cols=111 Identities=18% Similarity=0.131 Sum_probs=87.0
Q ss_pred EEEEEEeeCCC--CCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEeeecCCCcEEEEEEEEEEecccccc
Q 030372 47 EVLVITSQKGS--QGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNFLSKSRGTFYEGYMFPLLVTEQLEL 124 (178)
Q Consensus 47 ~vLLv~~~~~~--~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (178)
+|||+++.+.+ +.|.||||++++|||+.+||+||++||||+.+....+++.+.+...........++|.+.......
T Consensus 37 ~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~- 115 (176)
T 3q93_A 37 RVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTP- 115 (176)
T ss_dssp EEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCCEEEEEEEEEETTCSCEEEEEEEEESCEESCC-
T ss_pred EEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceeeEEEEEEEEEcCCCCcEEEEEEEEEECCCCCc-
Confidence 89999887642 789999999999999999999999999999998888888887776554444455666665433222
Q ss_pred CCccceeeeEEEeHHHHHHHhccchHHHHHHHHHH
Q 030372 125 WPEKDVRQRIWMSVAEAREACRHGWMKEALDILVE 159 (178)
Q Consensus 125 ~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 159 (178)
...+..+..|++++++..+...+..+.++..+++
T Consensus 116 -~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 149 (176)
T 3q93_A 116 -VESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQ 149 (176)
T ss_dssp -CCCSSEEEEEEETTCCCGGGBCTTHHHHHHHHHT
T ss_pred -CCCcceeeEEeeHHHccccccCcchHHHHHHHHc
Confidence 2335667799999999988888888887777664
No 26
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.85 E-value=3.3e-21 Score=142.20 Aligned_cols=126 Identities=20% Similarity=0.213 Sum_probs=95.8
Q ss_pred ceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCC--CCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEE
Q 030372 22 RRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGS--QGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWN 99 (178)
Q Consensus 22 ~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~--~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~ 99 (178)
.+.++.+++++.+ ..+|||+++.+.+ +.|.||||++++|||+.+||+||++||||+.+....+++.+.
T Consensus 9 ~~~~v~~vi~~~~----------~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~ 78 (161)
T 3exq_A 9 VELVTMVMVTDPE----------TQRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVTFCGTCE 78 (161)
T ss_dssp EEEEEEEEEBCTT----------TCCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCCEEEEEEE
T ss_pred ceEEEEEEEEeCC----------CCEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCCcEEEEEe
Confidence 4556666665432 2489999877543 578899999999999999999999999999998888888877
Q ss_pred eeecCCCcEEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHH
Q 030372 100 FLSKSRGTFYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVE 159 (178)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 159 (178)
+........+..++|.+...... ....|..++.|++++++.++...+.++.++..++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 136 (161)
T 3exq_A 79 WFDDDRQHRKLGLLYRASNFTGT--LKASAEGQLSWLPITALTRENSAASLPEFLQVFTG 136 (161)
T ss_dssp EECSSCSSEEEEEEEEECCEESC--CCGGGTTTEEEECGGGCCTTTBCTTHHHHHHHHTT
T ss_pred cccCCCCeEEEEEEEEEeccCCc--cCCCccceEEEeeHHHhhhCccChHHHHHHHHHhh
Confidence 76644444455566666543332 22346678999999999998888888888888776
No 27
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.85 E-value=2.1e-21 Score=142.46 Aligned_cols=122 Identities=18% Similarity=0.154 Sum_probs=88.2
Q ss_pred EEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEE----
Q 030372 24 QVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWN---- 99 (178)
Q Consensus 24 ~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~---- 99 (178)
.++++|+++.+ +|||+++++. +.|.+|||++++|||+.+||+||++||||+++....+++.+.
T Consensus 2 ~~~~~vi~~~~------------~vLL~~r~~~-g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~ 68 (156)
T 1k2e_A 2 IVTSGVLVENG------------KVLLVKHKRL-GVYIYPGGHVEHNETPIEAVKREFEEETGIVVEPIGFTYGIIDENA 68 (156)
T ss_dssp EEEEEECEETT------------EEEEEECTTT-CSEECSEEECCTTCCHHHHHHHHHHHHHSEEEEECCCCCCCBSSSE
T ss_pred eEEEEEEEECC------------EEEEEEEcCC-CcEECCeeecCCCCCHHHHHHHHHHHHHCCcceeccceeeeccccc
Confidence 46778887744 8999998776 899999999999999999999999999999987654432111
Q ss_pred ------------eeecCCCcE-EEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHHHHhccc
Q 030372 100 ------------FLSKSRGTF-YEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVERLSSRV 165 (178)
Q Consensus 100 ------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~~ 165 (178)
+........ ....+|.+... ..+..+++|++++++.++...+.++.++..+++.+....
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~-------~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~g 140 (156)
T 1k2e_A 69 VERPMPLVILEEVVKYPEETHIHFDLIYLVKRV-------GGDLKNGEWIDVREIDRIETFPNVRKVVSLALSTLYRLG 140 (156)
T ss_dssp EECCCCSEEEEEEEECSSCEEEEEEEEEEEEEE-------EECCCSCEEEEGGGGGGSCBSTTHHHHHHHHHHHHHHHH
T ss_pred ccccccceeeeeeecCCCCceEEEEEEEEEEec-------CCcEeeeEEeCHHHHhcCCCChHHHHHHHHHHHHHHhhc
Confidence 111111111 12233554422 235678899999999988888999999999888775543
No 28
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.85 E-value=5.1e-21 Score=146.96 Aligned_cols=132 Identities=13% Similarity=0.124 Sum_probs=101.3
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEe
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNF 100 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~ 100 (178)
.++..+++++++.+ +|||+++. . +.|.||||++++|||+.+||+||++||||+.+....+++.+.+
T Consensus 68 ~~~~~v~~vv~~~~------------~vLLvrr~-~-g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~ 133 (206)
T 3o8s_A 68 TPKLDTRAAIFQED------------KILLVQEN-D-GLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQRVVAILDK 133 (206)
T ss_dssp CCEEEEEEEEEETT------------EEEEEECT-T-SCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEEEH
T ss_pred CCCccEEEEEEECC------------EEEEEEec-C-CeEECCeeccCCCCCHHHHHHHHHHHHHCCcceeeeEEEEEec
Confidence 35677778887654 89999987 4 8999999999999999999999999999999988888887763
Q ss_pred eecCC---CcEEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHHHHhccccc
Q 030372 101 LSKSR---GTFYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVERLSSRVQQ 167 (178)
Q Consensus 101 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~~~~ 167 (178)
..... .......+|.+...... ..++.|..++.|++++++..+...+.+++.+..+++.++...++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~E~~~~~w~~~~el~~l~~~~~~~~~l~~~~~~~~~~~~~ 202 (206)
T 3o8s_A 134 HKNNPAKSAHRVTKVFILCRLLGGE-FQPNSETVASGFFSLDDLPPLYLGKNTAEQLALCLEASRSEHWE 202 (206)
T ss_dssp HHHCC-----CEEEEEEEEEEEEEC-CCCCSSCSEEEEECTTSCCCBCTTTCCHHHHHHHHHHHHCSSCC
T ss_pred cccCCCCCCceEEEEEEEEEecCCe-ecCCCCceEEEEEeHHHhhhccCCCchHHHHHHHHHHHHCCCCC
Confidence 32211 11233445565554332 23446888999999999999888899999999999888776554
No 29
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.84 E-value=1.4e-20 Score=143.40 Aligned_cols=119 Identities=32% Similarity=0.553 Sum_probs=84.4
Q ss_pred eecCCCceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceee
Q 030372 16 RYDNMGRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHEL 95 (178)
Q Consensus 16 ~~~~~~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~ 95 (178)
.+....++..+++|++..+ +..+|||+++.+.++.|.||||++++|||+++||+||++||||+.+....++
T Consensus 33 ~~~~~~~~~~~~~vi~~~~---------~~~~vLLv~r~~~~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~l 103 (194)
T 2fvv_A 33 TYDGDGYKKRAACLCFRSE---------SEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLV 103 (194)
T ss_dssp CBCTTSCEEEEEEEEESST---------TCCEEEEEECSSCTTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEEE
T ss_pred ccccCCccccEEEEEEEEC---------CCCEEEEEEEeCCCCcEECCCCcCCCCcCHHHHHHHHHHHHhCCccccceEE
Confidence 3444456777888888543 2348999998765589999999999999999999999999999998887788
Q ss_pred eEEEeeecCCCcEEEEEEEEEEeccccccCCc--cceeeeEEEeHHHHHHHhcc
Q 030372 96 GKWNFLSKSRGTFYEGYMFPLLVTEQLELWPE--KDVRQRIWMSVAEAREACRH 147 (178)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~e~~~~~W~~~~el~~~~~~ 147 (178)
+.+.+.. .. ...++|.+.........+. .+..++.|++++++.+++..
T Consensus 104 ~~~~~~~--~~--~~~~~f~~~~~~~~~~~~~~~e~~~~~~W~~~~el~~~l~~ 153 (194)
T 2fvv_A 104 GIFENQE--RK--HRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQY 153 (194)
T ss_dssp EEEEETT--TT--EEEEEEEEEEEEECSSCHHHHHHCCCEEEEEHHHHHHHHTT
T ss_pred EEEEcCC--Cc--eEEEEEEEEEccccCCCCCcccccceEEEEEHHHHHHHHhc
Confidence 7776432 11 2344555544322111111 12357899999999988753
No 30
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.84 E-value=2.7e-20 Score=140.87 Aligned_cols=130 Identities=17% Similarity=0.207 Sum_probs=97.5
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCC--CCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEE
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGS--QGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKW 98 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~--~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~ 98 (178)
.++.+|++|+++.+ +|||+++...+ +.|.||||+++.|||+++||+||++||||+.+....++..+
T Consensus 38 ~~~~~v~~ii~~~~------------~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~ 105 (189)
T 3cng_A 38 NPKVIVGCIPEWEN------------KVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANARVEIRELYAVY 105 (189)
T ss_dssp CCEEEEEEEEEETT------------EEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEE
T ss_pred CCceEEEEEEEeCC------------EEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCCccccceeEEEE
Confidence 45667888887643 89999987632 78999999999999999999999999999998776666665
Q ss_pred EeeecCCCcEEEEEEEEEEeccccccCCccceeeeEEEeHHHHH-HHhccchHHHHHHHHHHHHhccccc
Q 030372 99 NFLSKSRGTFYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAR-EACRHGWMKEALDILVERLSSRVQQ 167 (178)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~-~~~~~~~~~~~l~~~~~~l~~~~~~ 167 (178)
.+.. . ....++|.+...... ..+..|..++.|++++++. ..+..+..+.++..++...+.+..+
T Consensus 106 ~~~~--~--~~~~~~f~~~~~~~~-~~~~~E~~~~~W~~~~el~~~~l~~~~~~~~l~~~l~~~~~~~~~ 170 (189)
T 3cng_A 106 SLPH--I--SQVYMLFRAKLLDLD-FFPGIESLEVRLFGEQEIPWNDIAFRVIHDPLKRYMEERHHGQPA 170 (189)
T ss_dssp EEGG--G--TEEEEEEEEEECCSC-CCCCTTEEEEEEECTTTCCGGGBSCHHHHHHHHHHHHHHHHSSCC
T ss_pred ecCC--C--cEEEEEEEEEeCCCc-cCCCccceeEEEECHHHcCcccccChHHHHHHHHHHHhccCCCcc
Confidence 4432 1 234456776664432 2345678899999999998 4556778888888888766655543
No 31
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.84 E-value=5.5e-20 Score=134.59 Aligned_cols=125 Identities=18% Similarity=0.181 Sum_probs=89.1
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCC--CCEEeccccCCCCCCHHHHHHHHHhhhhceeec--cceeee
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGS--QGMMFPKGGWELDETVKEAALRESFEEAGVMGN--VEHELG 96 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~--~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~--~~~~~~ 96 (178)
.++.+|++|+++.+ .+|||+++.+.+ +.|.||||++++|||+.+||+||++||||+.+. ...+++
T Consensus 16 ~~~~~v~~vi~~~~-----------~~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~ 84 (160)
T 1rya_A 16 TPLVSLDFIVENSR-----------GEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYG 84 (160)
T ss_dssp SCEEEEEEEEECTT-----------SCEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSCCCGGGSEEEE
T ss_pred CcEEEEEEEEEcCC-----------CEEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCCCCcccceEEE
Confidence 35677888888633 279999987632 789999999999999999999999999999964 456777
Q ss_pred EEEeeecCC------CcEEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHh-ccchHHHHHHH
Q 030372 97 KWNFLSKSR------GTFYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREAC-RHGWMKEALDI 156 (178)
Q Consensus 97 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~-~~~~~~~~l~~ 156 (178)
.+.+.+... ...+...+|.+.........+..|..++.|++++++.++. ..+..++++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~l~~ 151 (160)
T 1rya_A 85 VWQHFYDDNFSGTDFTTHYVVLGFRFRVSEEELLLPDEQHDDYRWLTSDALLASDNVHANSRAYFLA 151 (160)
T ss_dssp EEEEEESSBTTBSSSCEEEEEEEEEEECCGGGCCCCSSSEEEEEEECHHHHHHCTTBCHHHHGGGCH
T ss_pred EEeEEEcccccCCCcCcEEEEEEEEEEcCccccccCCCccceEEEecHHHHhhccccCHHHHHHHHH
Confidence 765544322 1134456676665443333345578889999999999864 34555555543
No 32
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.84 E-value=1.4e-20 Score=142.56 Aligned_cols=124 Identities=18% Similarity=0.230 Sum_probs=91.5
Q ss_pred eEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEeee
Q 030372 23 RQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNFLS 102 (178)
Q Consensus 23 r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~~~ 102 (178)
..++++++++.+ +|||++++.. +.|.+|||++++|||+.+||+||++||||+.+....+++.+.+..
T Consensus 4 ~~v~~~vi~~~~------------~vLL~~r~~~-g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~ 70 (188)
T 3fk9_A 4 QRVTNCIVVDHD------------QVLLLQKPRR-GWWVAPGGKMEAGESILETVKREYWEETGITVKNPELKGIFSMVI 70 (188)
T ss_dssp CEEEEEEEEETT------------EEEEEECTTT-CCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSCEEEEEEEEEE
T ss_pred eEEEEEEEEECC------------EEEEEEeCCC-CeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCceEEEEEEEEe
Confidence 345666666543 8999998765 999999999999999999999999999999998888888777665
Q ss_pred cCCCcE---EEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHHH
Q 030372 103 KSRGTF---YEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVER 160 (178)
Q Consensus 103 ~~~~~~---~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~ 160 (178)
...... +..++|.+...... ..+..+..++.|++++++..+...+..+.++..+++.
T Consensus 71 ~~~~~~~~~~~~~~f~a~~~~~~-~~~~~e~~~~~W~~~~el~~~~l~~~~~~~l~~~l~~ 130 (188)
T 3fk9_A 71 FDEGKIVSEWMLFTFKATEHEGE-MLKQSPEGKLEWKKKDEVLELPMAAGDKWIFKHVLHS 130 (188)
T ss_dssp EETTEEEEEEEEEEEEESCEESC-CCSEETTEEEEEEEGGGGGGSCCCHHHHHHHHHHTTC
T ss_pred cCCCcceEEEEEEEEEEECCCCC-CcCCCCCEeEEEEEHHHhhhCCCCHHHHHHHHHHHcC
Confidence 443322 23455555433322 2233455688999999999887777777777766543
No 33
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.83 E-value=1.6e-19 Score=129.18 Aligned_cols=110 Identities=16% Similarity=0.115 Sum_probs=85.0
Q ss_pred EEEEEEeeCC---CCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEeeecCCCcEEEEEEEEEEeccccc
Q 030372 47 EVLVITSQKG---SQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNFLSKSRGTFYEGYMFPLLVTEQLE 123 (178)
Q Consensus 47 ~vLLv~~~~~---~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (178)
+|||+++... ++.|.||||+++.|||+.+||+||++||||+.+....+++.+.+...+ .....++|.+......
T Consensus 21 ~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~- 97 (140)
T 2rrk_A 21 KILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVGEYVASHQREVSG--RIIHLHAWHVPDFHGT- 97 (140)
T ss_dssp EEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECCEEEEEEEEEETT--EEEEEEEEEESEEEEC-
T ss_pred EEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecccEEEEEEEecCC--cEEEEEEEEEEeeCCC-
Confidence 8999988653 278999999999999999999999999999998877777776665543 2334456665543321
Q ss_pred cCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHHH
Q 030372 124 LWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVER 160 (178)
Q Consensus 124 ~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~ 160 (178)
....|..++.|++++++.++...+.++.++..+.+.
T Consensus 98 -~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~ 133 (140)
T 2rrk_A 98 -LQAHEHQALVWCSPEEALQYPLAPADIPLLEAFMAL 133 (140)
T ss_dssp -CCCSSCSCEEEECHHHHTTSCCCTTHHHHHHHHHHH
T ss_pred -cCCCccceeEEeCHHHHhhCCCChhHHHHHHHHHHH
Confidence 223466788999999999988888888888887764
No 34
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.83 E-value=3.5e-19 Score=133.16 Aligned_cols=130 Identities=22% Similarity=0.213 Sum_probs=89.8
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCC----CCCEEe-ccccCCCCCCHHHHHHHHHhhhhceeeccceee
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKG----SQGMMF-PKGGWELDETVKEAALRESFEEAGVMGNVEHEL 95 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~----~~~W~l-PgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~ 95 (178)
..+.++++++++.+ + +|||.++... +|.|.| |||+++.|||+.+||+||++||||+.+.....+
T Consensus 35 ~~~~~~~v~i~~~~---------~--~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l 103 (180)
T 2fkb_A 35 LRHRATYIVVHDGM---------G--KILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEH 103 (180)
T ss_dssp CCEEEEEEEEECSS---------S--CEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCCCEEE
T ss_pred ceeeEEEEEEECCC---------C--EEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCccceEEE
Confidence 34556666666543 2 7888877643 367999 999999999999999999999999987766777
Q ss_pred eEEEeeecCCCcEEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHh--ccchHHHHHHHHHHHHhcc
Q 030372 96 GKWNFLSKSRGTFYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREAC--RHGWMKEALDILVERLSSR 164 (178)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~--~~~~~~~~l~~~~~~l~~~ 164 (178)
+.+.+.... .....++|.+... ........|..++.|++++++.+++ ..+..+.++..++......
T Consensus 104 ~~~~~~~~~--~~~~~~~f~~~~~-~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~l~~~~~~~~~~ 171 (180)
T 2fkb_A 104 GQFYFEDKN--CRVWGALFSCVSH-GPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKALALWMKRNAKN 171 (180)
T ss_dssp EEEEEEETT--EEEEEEEEEEECC-CCCCCCTTTEEEEEEECHHHHHTTGGGBCHHHHHHHHHHHHHC---
T ss_pred EEEEecCCC--ceEEEEEEEEecC-CCcCCChhHhheEEEecHHHHHHHHHHhCCcHHHHHHHHHHhhcCC
Confidence 766655432 2334456666532 2222345578899999999999984 3466667777666655444
No 35
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.83 E-value=1.3e-19 Score=131.47 Aligned_cols=114 Identities=21% Similarity=0.122 Sum_probs=74.6
Q ss_pred ceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCC---CCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEE
Q 030372 22 RRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGS---QGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKW 98 (178)
Q Consensus 22 ~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~---~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~ 98 (178)
.+.+|++++++.+ + +|||+++++.+ +.|.||||++++|||+++||+||++||||+.+....+++.+
T Consensus 4 ~~~~v~vi~~~~~---------~--~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~l~~~ 72 (145)
T 2w4e_A 4 GPRAVFILPVTAQ---------G--EAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGGAASEWVPLPGF 72 (145)
T ss_dssp CCEEEEEEEEETT---------S--EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSEEEECCCB
T ss_pred eCCEEEEEEEcCC---------C--EEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCeEEEEecC
Confidence 3557777877543 2 79888765432 37999999999999999999999999999998766666553
Q ss_pred EeeecCCCcEEEEEEEEEEe-ccccccCCccceeeeEEEeHHHHHHHhccc
Q 030372 99 NFLSKSRGTFYEGYMFPLLV-TEQLELWPEKDVRQRIWMSVAEAREACRHG 148 (178)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~W~~~~el~~~~~~~ 148 (178)
... .. ......++|.+.. .......++.|..++.|++++++.+++...
T Consensus 73 ~~~-~~-~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~ 121 (145)
T 2w4e_A 73 YPQ-PS-ISGVVFYPLLALGVTLGAAQLEDTETIERVVLPLAEVYRMLEAG 121 (145)
T ss_dssp BSC-TT-TCCCEEEEEEEEEEEEC--------CEEEEEEEHHHHHHHHHHT
T ss_pred cCC-CC-ccCceEEEEEEEecccCCCCCCCCCeEEEEEEeHHHHHHHHHcC
Confidence 221 11 1112334555542 222222345578889999999999987543
No 36
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.83 E-value=7.8e-20 Score=132.58 Aligned_cols=112 Identities=20% Similarity=0.110 Sum_probs=87.8
Q ss_pred EEEEEEeeCC---CCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEeeecCCCcEEEEEEEEEEeccccc
Q 030372 47 EVLVITSQKG---SQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNFLSKSRGTFYEGYMFPLLVTEQLE 123 (178)
Q Consensus 47 ~vLLv~~~~~---~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (178)
+|||+++... +|.|.||||+++.|||+.+||+||++||||+.+....+++.+.+...+. ....++|.+......
T Consensus 34 ~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~- 110 (153)
T 3ees_A 34 KILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVGELKLACTHSYGDV--GILILFYEILYWKGE- 110 (153)
T ss_dssp EEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECCCEEEEEEEEETTE--EEEEEEEEECEEESC-
T ss_pred EEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccCceEEEEEEecCCC--eEEEEEEEEEECCCC-
Confidence 8999998764 2789999999999999999999999999999988877777766665432 334456666554332
Q ss_pred cCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHHHHh
Q 030372 124 LWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVERLS 162 (178)
Q Consensus 124 ~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~ 162 (178)
....|..++.|++++++.++...+.++.++..+.+.+.
T Consensus 111 -~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~ 148 (153)
T 3ees_A 111 -PRAKHHMMLEWIHPEELKHRNIPEANRKILHKIYKALG 148 (153)
T ss_dssp -CCCSSSSEEEEECGGGGGGSCCCHHHHTTHHHHHHHTT
T ss_pred -cCCCccceEEEecHHHhhhCCCCcchHHHHHHHHHhhc
Confidence 23456788999999999998888888888888877654
No 37
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.82 E-value=2.2e-19 Score=136.89 Aligned_cols=121 Identities=15% Similarity=0.174 Sum_probs=79.0
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCC-CCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEE
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKG-SQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWN 99 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~-~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~ 99 (178)
..+..|++++++.+ ..+|||++++.. ++.|.||||++++|||+.+||+||++||||+.+....+++...
T Consensus 24 ~~~v~v~~~v~~~~----------~~~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~~~~l~~~~~ 93 (199)
T 3h95_A 24 SHQVGVAGAVFDES----------TRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQ 93 (199)
T ss_dssp --CCEEEEEEEETT----------TTEEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEE
T ss_pred cccceEEEEEEeCC----------CCEEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCCccccceEEEEEe
Confidence 34566777777654 238999998763 2889999999999999999999999999999988666666432
Q ss_pred eeecCCCcEEEEEEEEEEec--cccccCCccceeeeEEEeHHHHHHHhccchHH
Q 030372 100 FLSKSRGTFYEGYMFPLLVT--EQLELWPEKDVRQRIWMSVAEAREACRHGWMK 151 (178)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~ 151 (178)
.............+|.+... .........|..++.|++++++.++.....+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~ 147 (199)
T 3h95_A 94 QHTNPGAFGKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKTENTTPIT 147 (199)
T ss_dssp CC---------CEEEEEEEEESCCCCCCCTTTEEEEEEEEHHHHHHCSSBCHHH
T ss_pred eecCCCCceeEEEEEEEEEcCCCcccCCCccceeeeEEEeHHHHhhhhhcChHH
Confidence 11111111112233333332 22223345688899999999999876544443
No 38
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.82 E-value=7.5e-20 Score=131.65 Aligned_cols=111 Identities=20% Similarity=0.106 Sum_probs=82.3
Q ss_pred EEEEEEeeCC---CCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeE--EEeeecCCCcEEEEEEEEEEeccc
Q 030372 47 EVLVITSQKG---SQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGK--WNFLSKSRGTFYEGYMFPLLVTEQ 121 (178)
Q Consensus 47 ~vLLv~~~~~---~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 121 (178)
+|||+++... ++.|.||||+++.||++.+||+||++||||+.+....+... +.+... ......++|.+.....
T Consensus 21 ~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 98 (144)
T 3r03_A 21 RVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAPLAFASHSYD--TFHLLMPLYACRSWRG 98 (144)
T ss_dssp CEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECS--SSEEEEEEEEECCCBS
T ss_pred EEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeeccceEEEEeeeccCC--CeEEEEEEEEEEecCC
Confidence 7999998754 27899999999999999999999999999999877643333 333332 3344556666655433
Q ss_pred cccCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHHHH
Q 030372 122 LELWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVERL 161 (178)
Q Consensus 122 ~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l 161 (178)
. ....|..++.|++++++.++...+.++.+++.+.+..
T Consensus 99 ~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~ 136 (144)
T 3r03_A 99 R--ATAREGQTLAWVRAERLREYPMPPADLPLIPILQDWL 136 (144)
T ss_dssp C--CCCCSSCEEEEECGGGGGGSCCCTTTTTHHHHHHHHC
T ss_pred c--cCCCCcceEEEEeHHHhccCCCCcchHHHHHHHhCcc
Confidence 2 2344677899999999999888888888877766554
No 39
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.82 E-value=4.6e-20 Score=133.32 Aligned_cols=126 Identities=16% Similarity=0.225 Sum_probs=82.3
Q ss_pred EEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEeeecC
Q 030372 25 VVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNFLSKS 104 (178)
Q Consensus 25 ~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~~~~~ 104 (178)
++++++++.+ ..+|||+++... +.|.+|||++++|||+.+||+||++||||+.+.....+..+.....
T Consensus 6 ~~~~~i~~~~----------~~~vLl~~r~~~-g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~- 73 (146)
T 2jvb_A 6 VRGAAIFNEN----------LSKILLVQGTES-DSWSFPRGKISKDENDIDCCIREVKEEIGFDLTDYIDDNQFIERNI- 73 (146)
T ss_dssp CEEEEEBCTT----------SSEEEEECCSSS-SCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSSSSCSSCEEEEEE-
T ss_pred EEEEEEEeCC----------CCEEEEEEEcCC-CcEECCcccCCCCCCHHHHHHHHHHHHHCCCchHhccccccccccc-
Confidence 4667777543 238999987766 8999999999999999999999999999999765422222222111
Q ss_pred CCcEEEEEEEEEEe-cc--ccccCCccceeeeEEEeHHHHHHHhccchH-----HHHHHHHHHHHhcc
Q 030372 105 RGTFYEGYMFPLLV-TE--QLELWPEKDVRQRIWMSVAEAREACRHGWM-----KEALDILVERLSSR 164 (178)
Q Consensus 105 ~~~~~~~~~~~~~~-~~--~~~~~~~~e~~~~~W~~~~el~~~~~~~~~-----~~~l~~~~~~l~~~ 164 (178)
.+..+ .+|.+.. .. .....++.|..++.|++++++.+++....+ ...+..+..+++..
T Consensus 74 ~~~~~--~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~l~~~~~~~ 139 (146)
T 2jvb_A 74 QGKNY--KIFLISGVSEVFNFKPQVRNEIDKIEWFDFKKISKTMYKSNIKYYLINSMMRPLSMWLRHQ 139 (146)
T ss_dssp TTEEE--EEEEECCCCSSSCCCCCCSSSCCCEEEEEHHHHHTGGGCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCceE--EEEEEEeccccccCCcCCcchhheeEEeEHHHHHhhhcccchhhhhHHHHHHHHHHHHHHh
Confidence 11122 2333322 11 112223567889999999999998865433 33455566666543
No 40
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.82 E-value=1.4e-19 Score=133.54 Aligned_cols=109 Identities=16% Similarity=0.083 Sum_probs=74.5
Q ss_pred EEEEEEeeCC----CCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEE------EeeecCCCc--EE-EEEE
Q 030372 47 EVLVITSQKG----SQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKW------NFLSKSRGT--FY-EGYM 113 (178)
Q Consensus 47 ~vLLv~~~~~----~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~------~~~~~~~~~--~~-~~~~ 113 (178)
+|||+++... ++.|.+|||++++|||+.+||+||++||||+.+....++... .+.+..... .+ ..++
T Consensus 40 ~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (165)
T 3oga_A 40 CYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSDITPWTFRDDIRIKTYADGRQEEIYMIYLI 119 (165)
T ss_dssp EEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEEEEEEEEEEEEEEEEC--CCEEEEEEEEEE
T ss_pred EEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCccccceeeeeeecceeeEecCCCCceeEEEEEEE
Confidence 8999987753 278999999999999999999999999999998765444321 122222221 11 1233
Q ss_pred EEEEeccccccCCccceeeeEEEeHHHHHHHhccchHHHHHHH
Q 030372 114 FPLLVTEQLELWPEKDVRQRIWMSVAEAREACRHGWMKEALDI 156 (178)
Q Consensus 114 ~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~ 156 (178)
|.+...... ...++|..++.|++++++.++...+.++.++..
T Consensus 120 ~~~~~~~~~-~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~ 161 (165)
T 3oga_A 120 FDCVSANRD-ICINDEFQDYAWVKPEELALYDLNVATRHTLAL 161 (165)
T ss_dssp EEEEESCCC-CCCCTTEEEEEEECGGGGGGSCBCHHHHHHHHH
T ss_pred EEeeccCCC-ccCCchheeeEEccHHHHhhCCCCHHHHHHHHH
Confidence 444433322 233457889999999999998777777777654
No 41
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.82 E-value=1.5e-19 Score=131.92 Aligned_cols=128 Identities=16% Similarity=0.173 Sum_probs=89.6
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCC-CCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEE
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGS-QGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWN 99 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~-~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~ 99 (178)
..+.++++|+++.+ .+...|||+++...+ ..|.+|||++++|||+.+||+||++||||+.+....+++.+.
T Consensus 6 ~~~~~~~~ii~~~~--------~~~~~vLl~~r~~~~~~gw~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~ 77 (155)
T 2b06_A 6 LTILTNICLIEDLE--------TQRVVMQYRAPENNRWSGYAFPGGHVENDEAFAESVIREIYEETGLTIQNPQLVGIKN 77 (155)
T ss_dssp CEEEEEEEEEEETT--------TTEEEEEEEC-----CCEEECCCCBCCTTSCHHHHHHHHHHHHHSEEEESCEEEEEEE
T ss_pred CcEEEEEEEEEECC--------CCeEEEEEEECCCCCCCCEeccceecCCCCCHHHHHHHHHHHHhCccccCCcEEEEEe
Confidence 35677878887644 222337777665542 238999999999999999999999999999998878877776
Q ss_pred eeecCCCcEEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHH
Q 030372 100 FLSKSRGTFYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVE 159 (178)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 159 (178)
+.... ......++|.+...... ....|..++.|++++++..+...+.++.++..+..
T Consensus 78 ~~~~~-~~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 134 (155)
T 2b06_A 78 WPLDT-GGRYIVICYKATEFSGT--LQSSEEGEVSWVQKDQIPNLNLAYDMLPLMEMMEA 134 (155)
T ss_dssp EECTT-SCEEEEEEEEECEEEEC--CCCBTTBEEEEEEGGGGGGSCBCTTHHHHHHHHHC
T ss_pred eccCC-CceEEEEEEEEEecCCC--CCCCcceeeEEeeHHHhhhCCCChhHHHHHHHHhC
Confidence 65432 23444566666543322 12246778999999999998887888887776653
No 42
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.82 E-value=5.5e-20 Score=134.99 Aligned_cols=132 Identities=17% Similarity=0.173 Sum_probs=86.6
Q ss_pred CCceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeE--
Q 030372 20 MGRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGK-- 97 (178)
Q Consensus 20 ~~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~-- 97 (178)
+.+|..+++++++.+ .+|||+++...++.|.+|||++++|||+++||+||++||||+.+........
T Consensus 11 ~~~~~~v~~~i~~~~-----------~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~ 79 (165)
T 1f3y_A 11 EGYRRNVGICLMNND-----------KKIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPYW 79 (165)
T ss_dssp SSCCCEEEEEEECTT-----------SCEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSEEEEEECSSC
T ss_pred cceeeeEEEEEECCC-----------CcEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCCChhhhhcccccc
Confidence 357888888888543 2799999876448899999999999999999999999999998642211100
Q ss_pred EEeeecCC-----------C-cEEEEEEEEEEecccc-c-c-----CCccceeeeEEEeHHHHHHHhccchHHHHHHHHH
Q 030372 98 WNFLSKSR-----------G-TFYEGYMFPLLVTEQL-E-L-----WPEKDVRQRIWMSVAEAREACRHGWMKEALDILV 158 (178)
Q Consensus 98 ~~~~~~~~-----------~-~~~~~~~~~~~~~~~~-~-~-----~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~ 158 (178)
+.+.+... . ......+|.+...... . . .+..|..++.|++++++.+++.. .....+.+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~-~~~~~~~~~~ 158 (165)
T 1f3y_A 80 LTYDFPPKVREKLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTVE-FKKPVYKEVL 158 (165)
T ss_dssp CBCCCCHHHHHHHGGGSCSSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBCG-GGHHHHHHHH
T ss_pred eeeecCccccccccccccccccCceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhhh-hhHHHHHHHH
Confidence 11111100 0 0012345555553321 1 1 13457889999999999998743 2455666666
Q ss_pred HHHhc
Q 030372 159 ERLSS 163 (178)
Q Consensus 159 ~~l~~ 163 (178)
+.++.
T Consensus 159 ~~l~~ 163 (165)
T 1f3y_A 159 SVFAP 163 (165)
T ss_dssp HHHGG
T ss_pred HHhhh
Confidence 66553
No 43
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.82 E-value=1.1e-19 Score=133.20 Aligned_cols=111 Identities=17% Similarity=0.111 Sum_probs=82.8
Q ss_pred EEEEEEeeCCC---CCEEeccccCCCCCCHHHHHHHHHhhhhceeecccee--eeEEEeeecCCCcEEEEEEEEEEeccc
Q 030372 47 EVLVITSQKGS---QGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHE--LGKWNFLSKSRGTFYEGYMFPLLVTEQ 121 (178)
Q Consensus 47 ~vLLv~~~~~~---~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (178)
+|||+++.... |.|.||||+++.||++.+||+||++||||+.+....+ +..+.+... ......++|.+.....
T Consensus 42 ~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 119 (158)
T 3hhj_A 42 RVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQADNLFPLTFASHGYE--TFHLLMPLYFCSHYKG 119 (158)
T ss_dssp EEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECS--SCEEEEEEEEESCCBS
T ss_pred EEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecceEEEEEEEeeccC--CcEEEEEEEEEEECCC
Confidence 89999987542 6899999999999999999999999999999877644 443444333 2234445666654332
Q ss_pred cccCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHHHH
Q 030372 122 LELWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVERL 161 (178)
Q Consensus 122 ~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l 161 (178)
.....|..++.|++++++.++...+.++.++..+.+++
T Consensus 120 --~~~~~e~~~~~W~~~~el~~~~~~~~~~~il~~~~~~l 157 (158)
T 3hhj_A 120 --VAQGREGQNLKWIFINDLDKYPMPEADKPLVQVLKNFF 157 (158)
T ss_dssp --CCCCTTSCEEEEEEGGGGGGSCCCTTTHHHHHHHHHC-
T ss_pred --ccCCccccceEEEcHHHHhhCCCCcchHHHHHHHHHhc
Confidence 22345678899999999999888888888888876543
No 44
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.81 E-value=8.4e-20 Score=133.18 Aligned_cols=119 Identities=15% Similarity=0.122 Sum_probs=84.9
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEe
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNF 100 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~ 100 (178)
.++.++++|+++.+ +|||+++ . +.|.||||++++|||+.+||+||++||||+.+....+++.+.+
T Consensus 17 ~~~~~~~~ii~~~~------------~vLl~~r--~-~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~ 81 (154)
T 2pqv_A 17 VFGVRATALIVQNH------------KLLVTKD--K-GKYYTIGGAIQVNESTEDAVVREVKEELGVKAQAGQLAFVVEN 81 (154)
T ss_dssp EEEEEEEECCEETT------------EEEEEEE--T-TEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEEE
T ss_pred eEeEEEEEEEEECC------------EEEEEec--C-CeEECcccCcCCCCCHHHHHHHHHHHHhCCeeeeceEEEEEee
Confidence 45777888887644 8999988 4 8999999999999999999999999999999887777766554
Q ss_pred eecCCCc--EEEEEEEEEEecccccc--CCccceeeeEEEeHHHHHHHhccch-HHHHH
Q 030372 101 LSKSRGT--FYEGYMFPLLVTEQLEL--WPEKDVRQRIWMSVAEAREACRHGW-MKEAL 154 (178)
Q Consensus 101 ~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~-~~~~l 154 (178)
....... ....++|.+........ .++.+..++.|++++++..+...+. .+..+
T Consensus 82 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~l 140 (154)
T 2pqv_A 82 RFEVDGVSYHNIEFHYLVDLLEDAPLTMQEDEKRQPCEWIDLDKLQNIQLVPVFLKTAL 140 (154)
T ss_dssp EEEETTEEEEEEEEEEEEEESSCCCSEEEETTEEEEEEEEEGGGGGGSCEESTTHHHHT
T ss_pred eecCCCCcceEEEEEEEEEecCCCCcccCCCCceeeEEEeEHHHHhhcCcCcHHHHHHh
Confidence 4332222 22334566665433221 2344677889999999988654443 34443
No 45
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.81 E-value=3.8e-20 Score=135.28 Aligned_cols=112 Identities=23% Similarity=0.227 Sum_probs=74.9
Q ss_pred ceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEE---
Q 030372 22 RRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKW--- 98 (178)
Q Consensus 22 ~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~--- 98 (178)
.+.++++|+++.+ .+|||+++. . +.|.||||++++|||+.+||+||++||||+.+....+++.+
T Consensus 20 ~~~~v~~ii~~~~-----------~~vLL~~r~-~-~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~ 86 (153)
T 3eds_A 20 FXPSVAAVIKNEQ-----------GEILFQYPG-G-EYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKKQKGVFGGK 86 (153)
T ss_dssp EEEEEEEEEBCTT-----------CCEEEECC-----CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEECSG
T ss_pred EeeeEEEEEEcCC-----------CeEEEEEcC-C-CcEECCccccCCCCCHHHHHHHHHHHHHCccceeeeEEEEeccc
Confidence 3455666655432 379888776 4 89999999999999999999999999999998887777765
Q ss_pred --EeeecCCCc-EEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhc
Q 030372 99 --NFLSKSRGT-FYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACR 146 (178)
Q Consensus 99 --~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~ 146 (178)
.+.+..... .+..++|.+..........++|..++.|++++++.++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~l~~ 137 (153)
T 3eds_A 87 EYRYTYSNGDEVEYIVVVFECEVTSGELRSIDGESLKLQYFSLSEKPPLAL 137 (153)
T ss_dssp GGEEECTTSCEEEEEEEEEEEEEEEECCC-------CEEEECGGGCCCBSS
T ss_pred ceeeecCCCCeEEEEEEEEEEEecCCccccCCCcEEEEEEECHHHCchhcc
Confidence 233333222 334566777665444344456788999999999988653
No 46
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.81 E-value=4.4e-19 Score=134.05 Aligned_cols=130 Identities=15% Similarity=0.095 Sum_probs=89.2
Q ss_pred ceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCC----CCCEEe-ccccCCCCCCHHHHHHHHHhhhhceeeccc-eee
Q 030372 22 RRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKG----SQGMMF-PKGGWELDETVKEAALRESFEEAGVMGNVE-HEL 95 (178)
Q Consensus 22 ~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~----~~~W~l-PgG~ve~gEs~~eaa~REv~EEtGl~~~~~-~~~ 95 (178)
.+.++++++++.+ .+|||+++... ++.|.+ |||++++|||+++||+||++||||+.+... .++
T Consensus 31 ~~~~v~~~i~~~~-----------g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~ 99 (190)
T 1hzt_A 31 LHLAFSSWLFNAK-----------GQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIY 99 (190)
T ss_dssp CEECEEEEEECTT-----------CCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEEEE
T ss_pred eEEEEEEEEEcCC-----------CEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhheee
Confidence 4456777777533 27999887643 388999 999999999999999999999999998776 666
Q ss_pred eEEEeeecCC-C-c-EEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhc------cchHHHHHHHHHHHHhc
Q 030372 96 GKWNFLSKSR-G-T-FYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACR------HGWMKEALDILVERLSS 163 (178)
Q Consensus 96 ~~~~~~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~------~~~~~~~l~~~~~~l~~ 163 (178)
+.+.+..... . . ....++|.+.... ......+|..++.|++++++.+++. .+.++.++..+..+...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~-~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 175 (190)
T 1hzt_A 100 PDFRYRATDPSGIVENEVCPVFAARTTS-ALQINDDEVMDYQWCDLADVLHGIDATPWAFSPWMVMQATNREARKRL 175 (190)
T ss_dssp TTCEEEEECTTSCEEEEECCEEEEEBCS-CCCCCTTTEEEEEEECHHHHHHHHHHCGGGBCHHHHHHHHSHHHHHHH
T ss_pred eeEEEEeeCCCCCcceEEEEEEEEecCC-CCcCCccceeeEEEecHHHHHHHHHcChhhcCchHHHHHHHHHHHHhh
Confidence 6655543211 1 1 2334566665443 2222445788999999999998853 34455566666555444
No 47
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.80 E-value=3.3e-19 Score=132.09 Aligned_cols=129 Identities=19% Similarity=0.198 Sum_probs=88.0
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEE-
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWN- 99 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~- 99 (178)
.+|.+|++++++.+ .+|||+++... +.|.+|||+++.|||+.+||+||++||||+.+....+++.+.
T Consensus 6 ~~~~~v~~~i~~~~-----------~~vLl~~r~~~-~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~ 73 (164)
T 2kdv_A 6 GYRPNVGIVICNRQ-----------GQVMWARRFGQ-HSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRN 73 (164)
T ss_dssp SEEEEEEEEEECTT-----------SEEEEEEETTC-CCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEECSS
T ss_pred CCCcEEEEEEEccC-----------CEEEEEEEcCC-CeEECCeeecCCCCCHHHHHHHHHHHHHCCCccceEEEEEecc
Confidence 57888888888644 28999988765 899999999999999999999999999999987766666532
Q ss_pred ---eeecCC--------C-cEEEEEEEEEEecccc-c--cC--CccceeeeEEEeHHHHHHHhc---cchHHHHHHHHHH
Q 030372 100 ---FLSKSR--------G-TFYEGYMFPLLVTEQL-E--LW--PEKDVRQRIWMSVAEAREACR---HGWMKEALDILVE 159 (178)
Q Consensus 100 ---~~~~~~--------~-~~~~~~~~~~~~~~~~-~--~~--~~~e~~~~~W~~~~el~~~~~---~~~~~~~l~~~~~ 159 (178)
|..... . ......+|.+...... . .. +..|..+++|++++++.+.+. .+.++.++..+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~~e~~~~l~~~~~~~~~~~l~~l~~ 153 (164)
T 2kdv_A 74 WLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFAS 153 (164)
T ss_dssp CEEEECCTTTCCTTSSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEEEEETTTGGGGSCHHHHHHHHHHHHHHHH
T ss_pred eeEEecCcceeeeccCcccccceeEEEEEEecCCccccccCCCCCchhceEEEecHHHhhhhhhhhhHHHHHHHHHHHHH
Confidence 222211 0 1223456666654321 1 11 234788999999999866532 2444455555444
Q ss_pred HH
Q 030372 160 RL 161 (178)
Q Consensus 160 ~l 161 (178)
.+
T Consensus 154 ~l 155 (164)
T 2kdv_A 154 VV 155 (164)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 48
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.80 E-value=2.6e-19 Score=142.81 Aligned_cols=113 Identities=14% Similarity=0.073 Sum_probs=85.9
Q ss_pred EEEEEEeeCCC-CCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEeeecCCCcEEEEEEEEEEeccccccC
Q 030372 47 EVLVITSQKGS-QGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNFLSKSRGTFYEGYMFPLLVTEQLELW 125 (178)
Q Consensus 47 ~vLLv~~~~~~-~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (178)
+|||+++...+ +.|.+|||++++|||+++||+||++||||+++....+++.+.+.+.. ....+|.+.........
T Consensus 152 ~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~~~~~~~~~~~~~----~~~~~f~a~~~~~~~~~ 227 (269)
T 1vk6_A 152 SILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQ----SLMTAFMAEYDSGDIVI 227 (269)
T ss_dssp EEEEEEETTTCSSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEETTE----EEEEEEEEEEEECCCCC
T ss_pred EEEEEEecCCCCCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeEEEEEEEecCCCC----EEEEEEEEEECCCCcCC
Confidence 89999987654 88999999999999999999999999999998877888876655432 23455666654433333
Q ss_pred CccceeeeEEEeHHHHHHHhccchH-HHHHHHHHHHHhc
Q 030372 126 PEKDVRQRIWMSVAEAREACRHGWM-KEALDILVERLSS 163 (178)
Q Consensus 126 ~~~e~~~~~W~~~~el~~~~~~~~~-~~~l~~~~~~l~~ 163 (178)
...|..+++|++++++..+.....+ +.++..++.++++
T Consensus 228 ~~~E~~~~~W~~~~el~~l~~~~si~~~li~~~l~~~r~ 266 (269)
T 1vk6_A 228 DPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRA 266 (269)
T ss_dssp CTTTEEEEEEEETTSCCSCCCTTSHHHHHHHHHHHHHHH
T ss_pred CCcceEEEEEEEHHHhhhcccCcHHHHHHHHHHHHHHHh
Confidence 4458889999999999887655443 5677777776653
No 49
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.80 E-value=6e-19 Score=144.87 Aligned_cols=131 Identities=18% Similarity=0.166 Sum_probs=92.9
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCC--CCEEeccccCCCCCCHHHHHHHHHhhhhceeeccce----e
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGS--QGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEH----E 94 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~--~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~----~ 94 (178)
..+.+|++++++.+ +|||++++..+ +.|.+|||++++|||+++||+||++||||+++.... +
T Consensus 206 ~~~~~v~~vv~~~~------------~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~~ 273 (352)
T 2qjt_B 206 PNFVTVDALVIVND------------HILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNINLTHEQLAIAK 273 (352)
T ss_dssp CEEEEEEEEEEETT------------EEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHHHE
T ss_pred CCceEEEEEEEECC------------EEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcccchhccee
Confidence 34567777877443 89999987643 789999999999999999999999999999976532 2
Q ss_pred eeEEEeeecCC--CcEEEEEEEEEEecccc--c-cCCccceeeeEEEeH-HHHHHH--hccchHHHHHHHHHHHHhc
Q 030372 95 LGKWNFLSKSR--GTFYEGYMFPLLVTEQL--E-LWPEKDVRQRIWMSV-AEAREA--CRHGWMKEALDILVERLSS 163 (178)
Q Consensus 95 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~-~~~~~e~~~~~W~~~-~el~~~--~~~~~~~~~l~~~~~~l~~ 163 (178)
.....|..... .......+|.+...... . ..+..|..++.|+++ +++.++ ...+..+.++..+++++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~~~~~~~~~~~il~~~~~~l~~ 350 (352)
T 2qjt_B 274 RCEKVFDYPDRSVRGRTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNICDRMLEDHYQIITILLEECGK 350 (352)
T ss_dssp EEEEEECCTTSCTTSEEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHTTTSBSTTHHHHHHHHHHHTC-
T ss_pred eeeEEecCCCCCCCccEEEEEEEEEEeCCCCCCccCCCccceEEEEecHHHHHHhhhhhhChhHHHHHHHHHHHhcc
Confidence 22222332221 12233445555553322 1 224568889999999 999997 5678889999999988843
No 50
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.80 E-value=6.1e-19 Score=130.99 Aligned_cols=115 Identities=21% Similarity=0.188 Sum_probs=78.0
Q ss_pred ceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCC---CCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEE
Q 030372 22 RRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKG---SQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKW 98 (178)
Q Consensus 22 ~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~---~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~ 98 (178)
.+.+|++++++ + + +|||+++++. ++.|.+|||++++|||+++||+||++||||+ +....+++.+
T Consensus 33 ~~~~v~vii~~-~---------~--~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~~~l~~~ 99 (170)
T 1v8y_A 33 HKPAVAVIALR-E---------G--RMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGDLTYLFSY 99 (170)
T ss_dssp ECCEEEEEEEE-T---------T--EEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEEEEEEEE
T ss_pred cCCeEEEEEEE-C---------C--EEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcCceeeEEE
Confidence 34578888887 4 1 8999987553 2689999999999999999999999999999 7766777765
Q ss_pred EeeecCCCcEEEEEEEEEEeccc-cccCCccceeeeEEEeHHHHHHHhccchHH
Q 030372 99 NFLSKSRGTFYEGYMFPLLVTEQ-LELWPEKDVRQRIWMSVAEAREACRHGWMK 151 (178)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~W~~~~el~~~~~~~~~~ 151 (178)
...... .....++|.+..... ....++.|..++.|++++++.+++....+.
T Consensus 100 ~~~~~~--~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~ 151 (170)
T 1v8y_A 100 FVSPGF--TDEKTHVFLAENLKEVEAHPDEDEAIEVVWMRPEEALERHQRGEVE 151 (170)
T ss_dssp ESCTTT--BCCEEEEEEEEEEEECC--------CEEEEECHHHHHHHHHTTSCC
T ss_pred ecCCCc--cccEEEEEEEEeccccCCCCCCCceEEEEEEEHHHHHHHHHCCCEe
Confidence 432221 122345565554322 222244578899999999999988654443
No 51
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.80 E-value=2.6e-19 Score=143.15 Aligned_cols=115 Identities=19% Similarity=0.309 Sum_probs=83.6
Q ss_pred CceEEEEEEEEEeecCCCCCCcCC--CeEEEEEEeeCCC--CCEEeccccCCCCCCHHHHHHHHHhhhhceeeccc--ee
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVD--DIEVLVITSQKGS--QGMMFPKGGWELDETVKEAALRESFEEAGVMGNVE--HE 94 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~--~~~vLLv~~~~~~--~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~--~~ 94 (178)
.+...|++|++..+ ++ ..+|||+++...+ +.|.+|||++++|||+.+||+||++||||+.+... ..
T Consensus 37 ~p~v~v~~vv~~~~--------~~~~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~~l~~ 108 (273)
T 2fml_A 37 KPSLTVDMVLLCYN--------KEADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQENIEQ 108 (273)
T ss_dssp CCEEEEEEEEEEEE--------TTTTEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCGGGEEE
T ss_pred CCceEEEEEEEEEc--------CCCCCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCcCcEEE
Confidence 56788999999876 33 5689999988754 78999999999999999999999999999876543 44
Q ss_pred eeEEEeeecCCCcEEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHH
Q 030372 95 LGKWNFLSKSRGTFYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREA 144 (178)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 144 (178)
++.+..............+|.+...... ..+.++..++.|++++++...
T Consensus 109 l~~~~~~~r~~~~~~~~~~y~a~~~~~~-~~~~~E~~~~~W~~~~e~~~~ 157 (273)
T 2fml_A 109 LHSFSRPDRDPRGWVVTVSYLAFIGEEP-LIAGDDAKEVHWFNLERHGQH 157 (273)
T ss_dssp EEEECCTTSSTTSSEEEEEEEEECCCCC-CCCCTTEEEEEEEEEEEETTE
T ss_pred EEEEcCCCCCCCceEEEEEEEEEeCCCC-CCCCcceeeEEEEEhhHhhhh
Confidence 5554433222222344456666654433 345567889999999976443
No 52
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.80 E-value=2.8e-19 Score=134.07 Aligned_cols=117 Identities=18% Similarity=0.097 Sum_probs=81.8
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCC---CCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeE
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKG---SQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGK 97 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~---~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~ 97 (178)
..+.+|++++++.+ .+|||+++.+. ++.|.||||++++|||+.+||+||++||||+.+....+++.
T Consensus 39 ~~~~~v~v~i~~~~-----------~~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~ 107 (182)
T 2yvp_A 39 GPVAASFVLPVTER-----------GTALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGAEAETLIPLPS 107 (182)
T ss_dssp SSCEEEEEEEBCTT-----------SEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECSCEEECCC
T ss_pred ecCCEEEEEEEcCC-----------CEEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcccEEEEEE
Confidence 34556767776543 27999987653 26799999999999999999999999999999877666665
Q ss_pred EEeeecCCCcEEEEEEEEEEecc--ccccCCccceeeeEEEeHHHHHHHhccchH
Q 030372 98 WNFLSKSRGTFYEGYMFPLLVTE--QLELWPEKDVRQRIWMSVAEAREACRHGWM 150 (178)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~e~~~~~W~~~~el~~~~~~~~~ 150 (178)
+..... ......++|.+.... .....+..|..++.|++++++.+++....+
T Consensus 108 ~~~~~~--~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~ 160 (182)
T 2yvp_A 108 FHPQPS--FTAVVFHPFLALKARVVTPPTLEEGELLESLELPLTEVYALLAKGEI 160 (182)
T ss_dssp BCSCTT--TBCCEEEEEEECSCEECSCCCCCTTCCEEEEEEEHHHHHHHHHTTCC
T ss_pred EeCCCC--ccccEEEEEEEeccccCCCCCCCCCceEEEEEEEHHHHHHHHHcCCc
Confidence 433221 112234556554321 222234557889999999999998865444
No 53
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.80 E-value=2.4e-19 Score=132.98 Aligned_cols=106 Identities=18% Similarity=0.093 Sum_probs=75.7
Q ss_pred EEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEeeecCCCcEEEEEEEEEEeccccccCC
Q 030372 47 EVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNFLSKSRGTFYEGYMFPLLVTEQLELWP 126 (178)
Q Consensus 47 ~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (178)
+|||++++ . +.|.+|||++++|||+.+||+||++||||+.+....+++.+.+.. ....+|.+.... ...+
T Consensus 28 ~vLL~~r~-~-g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~------~~~~~f~~~~~~--~~~~ 97 (163)
T 3f13_A 28 GVLVTASR-G-GRYNLPGGKANRGELRSQALIREIREETGLRINSMLYLFDHITPF------NAHKVYLCIAQG--QPKP 97 (163)
T ss_dssp EEEEEECC-----BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEEEEEEEEECSS------EEEEEEEEEC-C--CCCC
T ss_pred EEEEEEEC-C-CeEECCceeCCCCCCHHHHHHHHHHHHHCcccceeEEEEEEecCC------eEEEEEEEEECC--cCcc
Confidence 89999876 3 899999999999999999999999999999988777776654432 234556665432 2334
Q ss_pred ccceeeeEEEeHHHHHHHhccchHHHHHHHHHHHHhc
Q 030372 127 EKDVRQRIWMSVAEAREACRHGWMKEALDILVERLSS 163 (178)
Q Consensus 127 ~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~ 163 (178)
.+|..++.|++ .+.......+..+.++..+.+....
T Consensus 98 ~~E~~~~~W~~-~~~~~~~l~~~~~~il~~~~~~~~~ 133 (163)
T 3f13_A 98 QNEIERIALVS-SPDTDMDLFVEGRAILRRYARLRNE 133 (163)
T ss_dssp CTTCCEEEEES-STTCSSCBCHHHHHHHHHHHHHTTC
T ss_pred CCCceEEEEEC-cccccCCCCHHHHHHHHHHHHhhhc
Confidence 44788999999 4444445566777788777765543
No 54
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.80 E-value=4.1e-19 Score=145.08 Aligned_cols=128 Identities=18% Similarity=0.116 Sum_probs=85.5
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCC--CCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeee--
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGS--QGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELG-- 96 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~--~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~-- 96 (178)
..+.+|++|+++.+ +|||++++..+ +.|.+|||++++|||+++||+||++||||+++....+++
T Consensus 201 ~~~~~v~~vi~~~~------------~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~ 268 (341)
T 2qjo_A 201 PTFITTDAVVVQAG------------HVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPLPVLRGSI 268 (341)
T ss_dssp CCEEEEEEEEEETT------------EEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCHHHHHHTE
T ss_pred CCceEEEEEEEeCC------------EEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCccccccccccc
Confidence 35677888888544 89999987643 789999999999999999999999999999987554332
Q ss_pred --EEEeeecCC--CcEEEEEEEEEEecccc--ccCCccceeeeEEEeHHHHHHH--hccchHHHHHHHHHHH
Q 030372 97 --KWNFLSKSR--GTFYEGYMFPLLVTEQL--ELWPEKDVRQRIWMSVAEAREA--CRHGWMKEALDILVER 160 (178)
Q Consensus 97 --~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~e~~~~~W~~~~el~~~--~~~~~~~~~l~~~~~~ 160 (178)
...|..... .......+|.+...... ...+++|..++.|++++++.++ ...+..+.++..++.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~il~~~~~~ 340 (341)
T 2qjo_A 269 VDSHVFDAPGRSLRGRTITHAYFIQLPGGELPAVKGGDDAQKAWWMSLADLYAQEEQIYEDHFQIIQHFVSK 340 (341)
T ss_dssp EEEEEECCTTSCTTSCEEEEEEEEECCSSSCCCCC------CEEEEEHHHHHHTGGGBCTTHHHHHHHHC--
T ss_pred cceEEEeCCCCCCCCcEEEEEEEEEecCCCcCccCCCCceeeEEEeeHHHHhhhhhhhchHHHHHHHHHHhc
Confidence 222332221 11233445655553322 1234557888999999999997 5677788888877654
No 55
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.79 E-value=6e-19 Score=135.85 Aligned_cols=130 Identities=19% Similarity=0.100 Sum_probs=86.7
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCC------CCEEe-ccccCCCCCC--H----HHHHHHHHhhhhce
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGS------QGMMF-PKGGWELDET--V----KEAALRESFEEAGV 87 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~------~~W~l-PgG~ve~gEs--~----~eaa~REv~EEtGl 87 (178)
.++..+.++++..+ + +|||++|.+.+ +.|.+ |||++++||| + ++||+||++||||+
T Consensus 65 ~~~q~i~~~II~~~---------g--rvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl 133 (211)
T 3e57_A 65 TTKQVIPYVVIMDG---------D--RVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDV 133 (211)
T ss_dssp TEEEEEEEEEEEET---------T--EEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEE
T ss_pred cccceEEEEEEEEC---------C--EEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 56666666666543 2 89999987653 57998 9999999999 4 99999999999999
Q ss_pred eeccceeeeEEEeeecCCCcEEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhc-c-chHHHHHHHHHHHHhc
Q 030372 88 MGNVEHELGKWNFLSKSRGTFYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACR-H-GWMKEALDILVERLSS 163 (178)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~-~-~~~~~~l~~~~~~l~~ 163 (178)
.+....+++.+.+........+..++|.+...... ..+.+..++.|++++++.++.. . .+-+-+++.+.+.+++
T Consensus 134 ~v~~~~~ig~~~~~~~~~~~~~l~~~f~~~~~~g~--~~~~E~~~~~W~~~~eL~~~~~~le~wS~lvl~~l~~~~~~ 209 (211)
T 3e57_A 134 SLRELEFLGLINSSTTEVSRVHLGALFLGRGKFFS--VKEKDLFEWELIKLEELEKFSGVMEGWSKISAAVLLNLFLT 209 (211)
T ss_dssp EEEEEEEEEEEECCSSHHHHTEEEEEEEEEEEEEE--ESCTTTCEEEEEEHHHHHHHGGGCCHHHHHHHHHHHHHC--
T ss_pred eeeccEEEEEEeccCCCCCeEEEEEEEEEEeCCce--eCCCCeEEEEEEEHHHHHHhHhhccchhHHHHHHHHHHHhc
Confidence 98888888887653221122344456777655332 2344677899999999999842 2 2445556655565543
No 56
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.78 E-value=3.5e-19 Score=142.26 Aligned_cols=132 Identities=19% Similarity=0.231 Sum_probs=82.2
Q ss_pred eEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEeee
Q 030372 23 RQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNFLS 102 (178)
Q Consensus 23 r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~~~ 102 (178)
..++++|+++.. .++|||+++.+.++.|.+|||++++|||+++||+||++||||+.+.....+..+....
T Consensus 101 v~~v~avv~~~~----------~~~vLLv~r~~~~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~~~~l~~~~~~~~~~ 170 (271)
T 2a6t_A 101 IPVRGAIMLDMS----------MQQCVLVKGWKASSGWGFPKGKIDKDESDVDCAIREVYEETGFDCSSRINPNEFIDMT 170 (271)
T ss_dssp CCEEEEEEBCSS----------SSEEEEEEESSTTCCCBCSEEECCTTCCHHHHHHHHHHHHHCCCCTTTCCTTCEEEEE
T ss_pred CCeEEEEEEECC----------CCEEEEEEEeCCCCeEECCcccCCCCcCHHHHHHHHHHHHhCCCceeeeeeeeeccCC
Confidence 346788888753 2389999987655889999999999999999999999999999987643322222111
Q ss_pred cCCCcEEEEEEEEEEeccc-c--ccCCccceeeeEEEeHHHHHHHhccchH---------HHHHHHHHHHHhccccc
Q 030372 103 KSRGTFYEGYMFPLLVTEQ-L--ELWPEKDVRQRIWMSVAEAREACRHGWM---------KEALDILVERLSSRVQQ 167 (178)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~-~--~~~~~~e~~~~~W~~~~el~~~~~~~~~---------~~~l~~~~~~l~~~~~~ 167 (178)
. ... ...+|.+..... . .....+|+.++.|++++++..+.....+ ...+..+..+++.+..+
T Consensus 171 ~-~~~--~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~~~p~~~~L~~wl~~~~~~ 244 (271)
T 2a6t_A 171 I-RGQ--NVRLYIIPGISLDTRFESRTRKEISKIEWHNLMDLPTFKKNKPQTMKNKFYMVIPFLAPLKKWIKKRNIA 244 (271)
T ss_dssp E-TTE--EEEEEEECCCCTTCCCC------EEEEEEEEGGGSTTCC------CCGGGTTTGGGHHHHHHHHHHHHHH
T ss_pred c-CCc--eEEEEEEEEecCcccCCCCCccceeEEEEEEHHHHHHHHhcCccccccchhhhhHHHHHHHHHHHhcCcc
Confidence 1 111 234455443221 1 1224557888999999999876543322 23455566666655555
No 57
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.78 E-value=3.1e-18 Score=131.36 Aligned_cols=114 Identities=16% Similarity=0.063 Sum_probs=76.0
Q ss_pred eEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCC---CCEEeccccCC-CCCCHHHHHHHHHhhhhceeeccceeeeEE
Q 030372 23 RQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGS---QGMMFPKGGWE-LDETVKEAALRESFEEAGVMGNVEHELGKW 98 (178)
Q Consensus 23 r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~---~~W~lPgG~ve-~gEs~~eaa~REv~EEtGl~~~~~~~~~~~ 98 (178)
+.+|++++++.+ .+|||+++.+.+ +.|.||||+++ .|||+.+||+||++||||+.+....+++.+
T Consensus 43 ~~av~v~i~~~~-----------~~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~~~l~~~ 111 (207)
T 1mk1_A 43 FGAVAIVAMDDN-----------GNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVDL 111 (207)
T ss_dssp CCEEEEEECCTT-----------SEEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEEEEEEEE
T ss_pred CCEEEEEEEcCC-----------CEEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCcccccEEEEEE
Confidence 345666666432 389999876543 57999999999 999999999999999999998877777665
Q ss_pred EeeecCCCcEEEEEEEEEEecccccc---CCccceeeeEEEeHHHHHHHhccch
Q 030372 99 NFLSKSRGTFYEGYMFPLLVTEQLEL---WPEKDVRQRIWMSVAEAREACRHGW 149 (178)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~e~~~~~W~~~~el~~~~~~~~ 149 (178)
+..... .....++|.+........ ..+.|..++.|++++++.+++....
T Consensus 112 -~~~~~~-~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~ 163 (207)
T 1mk1_A 112 -DTAPGF-SDESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVLRGE 163 (207)
T ss_dssp -CSCTTT-BCCCEEEEEEEEEEECCC----------CEEEEEHHHHHHHHHTTS
T ss_pred -EcCCCc-cccEEEEEEEEccccCCCCCCCCCCceEEEEEEEHHHHHHHHHcCC
Confidence 332221 111334565554322211 2345778899999999999986554
No 58
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.78 E-value=1.3e-18 Score=131.79 Aligned_cols=115 Identities=23% Similarity=0.193 Sum_probs=83.2
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCC----CCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeee
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKG----SQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELG 96 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~----~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~ 96 (178)
..+..+++|+++.+ +..+|||+++... ++.|.||||+++.|||+++||+||++||||+.+....+++
T Consensus 32 ~~~~~~~~v~i~~~---------~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~ 102 (194)
T 1nqz_A 32 HYRRAAVLVALTRE---------ADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAVTLLG 102 (194)
T ss_dssp -CEEEEEEEEEESS---------SSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGGGCEEEE
T ss_pred CCceEEEEEEEecC---------CCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCccceEEEE
Confidence 35667777777433 4458999987642 3889999999999999999999999999999988777777
Q ss_pred EEEeeecCCCcEEEEEEEEEEecccc--ccCCccceeeeEEEeHHHH-HHHhc
Q 030372 97 KWNFLSKSRGTFYEGYMFPLLVTEQL--ELWPEKDVRQRIWMSVAEA-REACR 146 (178)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~e~~~~~W~~~~el-~~~~~ 146 (178)
.+.+...... ...++|.+...... ......|..++.|++++++ .+...
T Consensus 103 ~~~~~~~~~~--~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 153 (194)
T 1nqz_A 103 ELDDVFTPVG--FHVTPVLGRIAPEALDTLRVTPEVAQIITPTLAELRAVPLV 153 (194)
T ss_dssp ECCCEEETTT--EEEEEEEEEECGGGGGGCCCCTTEEEEECCBHHHHHHSCCE
T ss_pred EccCccCCCC--eEEEEEEEEecCCccccCCCccceeEEEEEEHHHhccCCCc
Confidence 7654443222 34456766664322 2345568889999999999 77553
No 59
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.77 E-value=6.9e-18 Score=125.06 Aligned_cols=125 Identities=14% Similarity=0.141 Sum_probs=85.0
Q ss_pred eEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCC----CCCEE-eccccCCCCCCHHHHHHHHHhhhhceeeccc--eee
Q 030372 23 RQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKG----SQGMM-FPKGGWELDETVKEAALRESFEEAGVMGNVE--HEL 95 (178)
Q Consensus 23 r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~----~~~W~-lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~--~~~ 95 (178)
+.++++++++.+ + +|||+++... ++.|. +|||++++|||+.+||+||++||||+.+... ..+
T Consensus 34 ~~~v~v~i~~~~---------~--~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~~~ 102 (171)
T 1q27_A 34 VRVVNAFLRNSQ---------G--QLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWRPL 102 (171)
T ss_dssp CEEEEEEEEETT---------T--EEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSSCEEEE
T ss_pred ceEEEEEEECCC---------C--eEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccccceEEE
Confidence 556667776544 2 8999886542 37898 9999999999999999999999999997764 445
Q ss_pred eEEE-eeecCCCcEEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhc--cchHHHHHHHHHHHHh
Q 030372 96 GKWN-FLSKSRGTFYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACR--HGWMKEALDILVERLS 162 (178)
Q Consensus 96 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~--~~~~~~~l~~~~~~l~ 162 (178)
+.+. +..... . ..++|.+.. .........|..++.|++++++.++.. ......++..+...+.
T Consensus 103 ~~~~~~~~~~~--~-~~~~f~~~~-~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~l~~~~~ 168 (171)
T 1q27_A 103 ASFSPFQTTLS--S-FMCVYELRS-DATPIFNPNDISGGEWLTPEHLLARIAAGEAAKGDLAELVRRCYR 168 (171)
T ss_dssp EEECSSSSCCS--S-EEEEEEEEC-CCCCCSCTTTCSCCEEECHHHHHHHHHHHSSCCHHHHHHHHHHHT
T ss_pred EEEeccCCCCc--c-EEEEEEEEE-CCccccCchhhheEEEecHHHHHHHHhcCCCCchhHHHHHHHHHh
Confidence 5444 333222 1 445666655 222222345778899999999997643 3445566666655543
No 60
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.77 E-value=1.6e-18 Score=132.27 Aligned_cols=102 Identities=19% Similarity=0.025 Sum_probs=74.7
Q ss_pred EEEEEEeeCCC---CCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEeeecCCCcEEEEEEEEEEecccc-
Q 030372 47 EVLVITSQKGS---QGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNFLSKSRGTFYEGYMFPLLVTEQL- 122 (178)
Q Consensus 47 ~vLLv~~~~~~---~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 122 (178)
+|||+++.+.+ +.|.||||++++|||+++||+||++||||+.+....+++.+.+..... ....++|.+......
T Consensus 61 ~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~--~~~~~~f~a~~~~~~~ 138 (198)
T 1vhz_A 61 HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTFLKKLSMAPSYF--SSKMNIVVAQDLYPES 138 (198)
T ss_dssp EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEECCTTTC--CCEEEEEEEEEEEECC
T ss_pred EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCceEEEEEEeCCCCcc--CcEEEEEEEEeCCccc
Confidence 89999875542 469999999999999999999999999999988777777765432211 123445665543222
Q ss_pred ccCCccceeeeEEEeHHHHHHHhccchH
Q 030372 123 ELWPEKDVRQRIWMSVAEAREACRHGWM 150 (178)
Q Consensus 123 ~~~~~~e~~~~~W~~~~el~~~~~~~~~ 150 (178)
....+.|..++.|++++++.+++....+
T Consensus 139 ~~~~~~E~~~~~w~~~~el~~~~~~~~i 166 (198)
T 1vhz_A 139 LEGDEPEPLPQVRWPLAHMMDLLEDPDF 166 (198)
T ss_dssp CCCCCSSCCCEEEEEGGGGGGGGGCTTT
T ss_pred CCCCCCceEEEEEEEHHHHHHHHHcCCC
Confidence 2234457788899999999999876544
No 61
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.77 E-value=2.4e-18 Score=130.52 Aligned_cols=116 Identities=15% Similarity=0.085 Sum_probs=79.6
Q ss_pred eEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeC---------CCCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccce
Q 030372 23 RQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQK---------GSQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEH 93 (178)
Q Consensus 23 r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~---------~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~ 93 (178)
+.+|++++++.+ ..+|||+++.+ .++.|.||||+++ |||+.+||+||++||||+.+....
T Consensus 45 ~~av~v~~~~~~----------~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~~~ 113 (191)
T 3o6z_A 45 GNGATILLYNTK----------KKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGEVR 113 (191)
T ss_dssp CCEEEEEEEETT----------TTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSCEE
T ss_pred CCEEEEEEEECC----------CCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCcEE
Confidence 445767777643 23899998764 3367999999999 999999999999999999987777
Q ss_pred eeeEEEeeecCCCcEEEEEEEEEEeccccc----cCCccceeeeEEEeHHHHHHHhccchHH
Q 030372 94 ELGKWNFLSKSRGTFYEGYMFPLLVTEQLE----LWPEKDVRQRIWMSVAEAREACRHGWMK 151 (178)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~e~~~~~W~~~~el~~~~~~~~~~ 151 (178)
+++.+..... ......++|.+....... ...++|..++.|++++++.+++....+.
T Consensus 114 ~l~~~~~~~~--~~~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~g~i~ 173 (191)
T 3o6z_A 114 KLFELYMSPG--GVTELIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALEMIKTGEIR 173 (191)
T ss_dssp EEEEEESCTT--TBCCEEEEEEEECCTTCC--------CCSSEEEEEEHHHHHHHHHHSSCC
T ss_pred EEEEEEeCCC--ccCcEEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHHHHHcCCCC
Confidence 7776533321 122344566666533211 1125678899999999999998655443
No 62
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.76 E-value=1.6e-19 Score=127.34 Aligned_cols=107 Identities=19% Similarity=0.177 Sum_probs=79.4
Q ss_pred EEEEEEeeCC---CCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEeeecCCCcEEEEEEEEEEeccccc
Q 030372 47 EVLVITSQKG---SQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNFLSKSRGTFYEGYMFPLLVTEQLE 123 (178)
Q Consensus 47 ~vLLv~~~~~---~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (178)
+|||+++... ++.|.||||++++|||+.+||+||++||||+.+....+++.+.+..++ .....++|.+......
T Consensus 17 ~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~- 93 (129)
T 1mut_A 17 EIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFSLFEKLEYEFPD--RHITLWFWLVERWEGE- 93 (129)
T ss_dssp EEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEECCCCCCBCCCSS--CEEECCCEEEEECSSC-
T ss_pred EEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccceEEEEEEEecCC--ceEEEEEEEEEccCCc-
Confidence 8999987764 278999999999999999999999999999998766666655444332 2233455666554322
Q ss_pred cCCccceeeeEEEeHHHHHHHhccchHHHHHHHH
Q 030372 124 LWPEKDVRQRIWMSVAEAREACRHGWMKEALDIL 157 (178)
Q Consensus 124 ~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~ 157 (178)
....|..++.|++++++.++...+.++.+++.+
T Consensus 94 -~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~l 126 (129)
T 1mut_A 94 -PWGKEGQPGEWMSLVGLNADDFPPANEPVIAKL 126 (129)
T ss_dssp -CCCCSSCCCEEEESSSCCTTTSCTTCHHHHHHH
T ss_pred -cCCcccceeEEeCHHHcccccCCchhHHHHHHH
Confidence 223467788999999999887777777777654
No 63
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.75 E-value=5.5e-18 Score=131.36 Aligned_cols=92 Identities=16% Similarity=0.059 Sum_probs=63.5
Q ss_pred CCEEeccccCCC-CCCHHHHHHHHHhhhhceee--ccceeeeEEEeeecCCCcEEEEEEEEEEeccc------cccCCcc
Q 030372 58 QGMMFPKGGWEL-DETVKEAALRESFEEAGVMG--NVEHELGKWNFLSKSRGTFYEGYMFPLLVTEQ------LELWPEK 128 (178)
Q Consensus 58 ~~W~lPgG~ve~-gEs~~eaa~REv~EEtGl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 128 (178)
+.|+||||++++ |||+++||+||++||||+.+ .....++.+..... ......++|.+..... .....++
T Consensus 95 ~~welPgG~ve~~gEs~~eaA~REl~EEtGl~~~~~~l~~l~~~~~~~g--~~~~~~~~f~a~~~~~~~~~~~~~~~d~~ 172 (218)
T 3q91_A 95 VTVELCAGLVDQPGLSLEEVACKEAWEECGYHLAPSDLRRVATYWSGVG--LTGSRQTMFYTEVTDAQRSGPGGGLVEEG 172 (218)
T ss_dssp EEEECEEEECCSSSCCHHHHHHHHHHHHHCBCCCGGGCEEEEEEEEC-----CCEEEEEEEEEECGGGBCC---------
T ss_pred eEEECCcceeCCCCCCHHHHHHHHHHHHhCCccccCceEEEEEEecCCC--ccceEEEEEEEEECCcccccCCCCCCCCC
Confidence 579999999999 99999999999999999998 44566665433211 1123456677765421 1223455
Q ss_pred ceeeeEEEeHHHHHHHhccchHH
Q 030372 129 DVRQRIWMSVAEAREACRHGWMK 151 (178)
Q Consensus 129 e~~~~~W~~~~el~~~~~~~~~~ 151 (178)
|..++.|++++++.+++....+.
T Consensus 173 E~~ev~wv~l~el~~~i~~g~i~ 195 (218)
T 3q91_A 173 ELIEVVHLPLEGAQAFADDPDIP 195 (218)
T ss_dssp CCEEEEEEEGGGHHHHHHCTTSC
T ss_pred cEEEEEEEEHHHHHHHHHcCCCC
Confidence 88899999999999998765553
No 64
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.74 E-value=7.4e-18 Score=129.62 Aligned_cols=116 Identities=20% Similarity=0.122 Sum_probs=78.9
Q ss_pred eEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCC--------CCEEeccccCCCCCCHHHHHHHHHhhhhceeecccee
Q 030372 23 RQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGS--------QGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHE 94 (178)
Q Consensus 23 r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~--------~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~ 94 (178)
..+|++++++.. ..+|||+++.+.+ +.|++|||++++|||+++||+||++||||+.+....+
T Consensus 57 ~~av~vl~~~~~----------~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~~~ 126 (209)
T 1g0s_A 57 GHAAVLLPFDPV----------RDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKP 126 (209)
T ss_dssp CCEEEEEEEETT----------TTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCCEEE
T ss_pred CCEEEEEEEECC----------CCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCcEEE
Confidence 456777777633 2289999765432 4589999999999999999999999999999877777
Q ss_pred eeEEEeeecCCCcEEEEEEEEEEeccc--cc---cCCccceeeeEEEeHHHHHHHhccchH
Q 030372 95 LGKWNFLSKSRGTFYEGYMFPLLVTEQ--LE---LWPEKDVRQRIWMSVAEAREACRHGWM 150 (178)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~e~~~~~W~~~~el~~~~~~~~~ 150 (178)
++.+. ..... .....++|.+..... .. ...+.|..++.|++++++.+++....+
T Consensus 127 l~~~~-~~~g~-~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~g~i 185 (209)
T 1g0s_A 127 VLSFL-ASPGG-TSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEEGKI 185 (209)
T ss_dssp EEEEE-SCTTT-BCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHTTSS
T ss_pred eEEEe-cCCCc-cCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHcCCC
Confidence 77652 22221 122345666664221 11 234456778999999999998865443
No 65
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.74 E-value=2.7e-17 Score=120.09 Aligned_cols=126 Identities=17% Similarity=0.182 Sum_probs=85.9
Q ss_pred ceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCC---CCCEEeccccCCCCCCHH-HHHHHHHhhhhc-eeeccceeee
Q 030372 22 RRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKG---SQGMMFPKGGWELDETVK-EAALRESFEEAG-VMGNVEHELG 96 (178)
Q Consensus 22 ~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~---~~~W~lPgG~ve~gEs~~-eaa~REv~EEtG-l~~~~~~~~~ 96 (178)
.|..+.+|+++.. +...+|||+++... +|.|.||||+++.||++. +||+||++|||| +.+....+++
T Consensus 18 ~~~~~~~vi~~~~--------~~~~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~~~l~ 89 (155)
T 1x51_A 18 EESSATCVLEQPG--------ALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLG 89 (155)
T ss_dssp EEEEEEEEEEEEC--------SSSEEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTCEECC
T ss_pred eEEEEEEEEEecC--------CCCCEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeeeeecc
Confidence 4555656665542 11348999987654 268999999999999996 999999999999 8876655555
Q ss_pred EEEeeecCCCcEEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHH
Q 030372 97 KWNFLSKSRGTFYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVE 159 (178)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 159 (178)
.+.+.+++ ......+|.+....... ...+..++.|++++++.++.....++.++..+..
T Consensus 90 ~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 148 (155)
T 1x51_A 90 EVVHTFSH--IKLTYQVYGLALEGQTP--VTTVPPGARWLTQEEFHTAAVSTAMKKVFRVYQG 148 (155)
T ss_dssp CBCCBCSS--CEEEEEEEEEECSSCCC--CCCCCTTEEEEEHHHHHHSCCCHHHHHHHHHHHH
T ss_pred eEEEecCC--ccEEEEEEEEEEcCCCC--CCCCCCccEEccHHHhhhcCCCHHHHHHHHHHHh
Confidence 54444332 22344567665543221 2235567899999999987776666777665543
No 66
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.74 E-value=1.1e-17 Score=128.75 Aligned_cols=114 Identities=15% Similarity=0.103 Sum_probs=76.9
Q ss_pred EEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCC---CCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEe
Q 030372 24 QVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGS---QGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNF 100 (178)
Q Consensus 24 ~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~---~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~ 100 (178)
.+|+++++..+ + ++..+|||+++.+.+ +.|.||||++++|||+++||+||++||||+.+....+++.+..
T Consensus 62 ~av~v~~v~~~---~----~~~~~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~ 134 (212)
T 2dsc_A 62 DGVAVIPVLQR---T----LHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCM 134 (212)
T ss_dssp SEEEEEEEEEC---T----TSCCEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEECCCEES
T ss_pred CEEEEEEEEeC---C----CCCcEEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCCCccceEEeccEEc
Confidence 46666666554 0 123589998764432 4699999999999999999999999999999876666654422
Q ss_pred eecCCCcEEEEEEEEEEecc--c-----cccCCccceeeeEEEeHHHHHHHhc
Q 030372 101 LSKSRGTFYEGYMFPLLVTE--Q-----LELWPEKDVRQRIWMSVAEAREACR 146 (178)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~e~~~~~W~~~~el~~~~~ 146 (178)
. ... .....++|.+.+.. . .....++|..++.|++++++.+++.
T Consensus 135 ~-~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 135 D-PGL-SNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp C-TTT-BCCEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHHH
T ss_pred C-CCc-cCceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 2 111 11223455554322 1 1122455788999999999999875
No 67
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.70 E-value=7.2e-17 Score=130.14 Aligned_cols=138 Identities=13% Similarity=0.105 Sum_probs=89.2
Q ss_pred ceEEEEEEEEEeec-CCCCCC-----cCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhceee------
Q 030372 22 RRQVVGCVPYRYKT-GDGAGN-----VVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAGVMG------ 89 (178)
Q Consensus 22 ~r~~~g~i~~~~~~-~~~~~~-----~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~------ 89 (178)
+..++.+|+.+.+. ..|..- ..+..+|||+++... +.|.+|||++++|||+.+||+||++||||+.+
T Consensus 109 p~~a~~~vv~~~~~~~~g~~~~~~~~g~~~l~vLl~~r~~~-g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~~~~~~~~ 187 (292)
T 1q33_A 109 PNHAADPIITRWKRDSSGNKIMHPVSGKHILQFVAIKRKDC-GEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAE 187 (292)
T ss_dssp EEEEEEEEEEEECBCTTSCBCBCTTTCSBCEEEEEEECTTT-CSEECCCEECCTTCCHHHHHHHHHHHHHSCGGGSCSSH
T ss_pred ccccceeeeeeecccccCceeeeccCCCCceEEEEEEecCC-CcEeCCCcccCCCCCHHHHHHHHHHHHhCCcccccccc
Confidence 35578888876420 111110 123568999998887 99999999999999999999999999999983
Q ss_pred ------ccceee---eE--EEeeecCC---C-cEEEEEEEEEEeccc-----cccCCccceeeeEEEeHHHHHHHhccch
Q 030372 90 ------NVEHEL---GK--WNFLSKSR---G-TFYEGYMFPLLVTEQ-----LELWPEKDVRQRIWMSVAEAREACRHGW 149 (178)
Q Consensus 90 ------~~~~~~---~~--~~~~~~~~---~-~~~~~~~~~~~~~~~-----~~~~~~~e~~~~~W~~~~el~~~~~~~~ 149 (178)
.+..++ +. |....... + ..+...+|.+..... ....+.+|..++.|++++++..+ ...
T Consensus 188 ~~~l~~~l~~l~~~~g~~vy~~~~~dpr~~d~~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~~L--~~~ 265 (292)
T 1q33_A 188 KREIEEKLHKLFSQDHLVIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKLKL--YAS 265 (292)
T ss_dssp HHHHHHHHHHHTTTSEEEEEEEECCCTTCCSSEEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTCCC--STT
T ss_pred chhhHHHHHHHhhcccceeecccccCCCCCcccEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCccc--CHh
Confidence 222222 11 21111111 1 133344555544221 12234567889999999999863 567
Q ss_pred HHHHHHHHHHHHh
Q 030372 150 MKEALDILVERLS 162 (178)
Q Consensus 150 ~~~~l~~~~~~l~ 162 (178)
.++++..+++++.
T Consensus 266 h~~il~~~~~~~~ 278 (292)
T 1q33_A 266 HSQFIKLVAEKRD 278 (292)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 7888888887764
No 68
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.64 E-value=6.1e-16 Score=119.15 Aligned_cols=118 Identities=13% Similarity=-0.026 Sum_probs=76.2
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCC-CHHHHHHHHHhhhhceeeccce-----e
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDE-TVKEAALRESFEEAGVMGNVEH-----E 94 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gE-s~~eaa~REv~EEtGl~~~~~~-----~ 94 (178)
..+.++.++++.....-.-.-.+...+|||.++ .. +.|.||||++++|| |+++||+||++||||+.+.... +
T Consensus 31 ~~~~~~~~~l~~~~~~vv~~i~~~~~~vLl~~r-~~-g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~~ 108 (212)
T 1u20_A 31 GYKHACHALLHAPSQAKLFDRVPIRRVLLMMMR-FD-GRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDY 108 (212)
T ss_dssp SCEEEEEEEEEEECCCEETTTEECCEEEEEEEE-TT-SCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGGE
T ss_pred CCcccceEEEeCCCceEEEEEEecCCEEEEEEe-CC-CeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccccceeeeeE
Confidence 346677777766541000001123447877776 44 89999999999999 9999999999999999976542 4
Q ss_pred eeEEEeeecCCCcEEEEEEEEEEeccccc----------cCCccceeeeEEEeHHHHHH
Q 030372 95 LGKWNFLSKSRGTFYEGYMFPLLVTEQLE----------LWPEKDVRQRIWMSVAEARE 143 (178)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~e~~~~~W~~~~el~~ 143 (178)
+..+.+.+. .....++|.+....... ...+.|..++.|++++++.+
T Consensus 109 ~~~~~~~~~---~~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~ 164 (212)
T 1u20_A 109 RSSQVREHP---QKCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRD 164 (212)
T ss_dssp EEEEEECTT---SCEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTT
T ss_pred EEeccccCC---CcEEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhh
Confidence 555444333 22345567666543211 11334677889999998854
No 69
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.63 E-value=1.2e-15 Score=126.55 Aligned_cols=109 Identities=12% Similarity=-0.006 Sum_probs=84.3
Q ss_pred EEEEEEeeCC---CCCEEeccccCCCCCCHHHHHHHHHhhhhceeeccceeeeEEEeeecCCCcEEEEEEEEEEeccccc
Q 030372 47 EVLVITSQKG---SQGMMFPKGGWELDETVKEAALRESFEEAGVMGNVEHELGKWNFLSKSRGTFYEGYMFPLLVTEQLE 123 (178)
Q Consensus 47 ~vLLv~~~~~---~~~W~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (178)
+|||++|... +|.|+||||+++.| |+++|++||++||||+.+.....++.+.+.+++. .....+|.+.....
T Consensus 253 ~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~~~l~~~~h~~~h~--~~~~~~~~~~~~~~-- 327 (369)
T 3fsp_A 253 RVLIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELTEPIVSFEHAFSHL--VWQLTVFPGRLVHG-- 327 (369)
T ss_dssp EEEEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEECCCCCEEEEECSSE--EEEEEEEEEEECCS--
T ss_pred EEEEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCCceeeecccccEEEEcceE--EEEEEEEEEEEcCC--
Confidence 8999998754 27899999999999 9999999999999999988777777766665432 34455666655432
Q ss_pred cCCccceeeeEEEeHHHHHHHhccchHHHHHHHHHHHHhc
Q 030372 124 LWPEKDVRQRIWMSVAEAREACRHGWMKEALDILVERLSS 163 (178)
Q Consensus 124 ~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~ 163 (178)
..+..++.|++++++.++...+.++.++..+.+.+..
T Consensus 328 ---~~e~~~~~Wv~~~el~~~~l~~~~~~il~~l~~~~~~ 364 (369)
T 3fsp_A 328 ---GPVEEPYRLAPEDELKAYAFPVSHQRVWREYKEWASG 364 (369)
T ss_dssp ---SCCCTTEEEEEGGGGGGSCCCHHHHHHHHHHHHHTC-
T ss_pred ---CCCccccEEeeHHHhhhCCCCHHHHHHHHHHHHHhcC
Confidence 2356788999999999887777788888877766543
No 70
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.61 E-value=2.6e-14 Score=111.81 Aligned_cols=114 Identities=12% Similarity=0.100 Sum_probs=78.5
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCC----CCCEEec-cccCCCC------CC---HHHHHHHHHhhhhc
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKG----SQGMMFP-KGGWELD------ET---VKEAALRESFEEAG 86 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~----~~~W~lP-gG~ve~g------Es---~~eaa~REv~EEtG 86 (178)
..+.++++++++.+ + +|||.+|... ||.|.+| ||++++| |+ +.+||+||++||||
T Consensus 57 ~~h~av~v~v~~~~---------g--~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElG 125 (235)
T 2dho_A 57 LLHRAFSVFLFNTE---------N--KLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELG 125 (235)
T ss_dssp CCEEEEEEEEECTT---------C--CEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHC
T ss_pred ceEEEEEEEEEcCC---------C--EEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHC
Confidence 45667777777543 2 7888877543 3789999 5999999 88 49999999999999
Q ss_pred eeecc-----ceeeeEEEeeecCCCc---EEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhc
Q 030372 87 VMGNV-----EHELGKWNFLSKSRGT---FYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACR 146 (178)
Q Consensus 87 l~~~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~ 146 (178)
+.+.. ..+++.+.|....... ....++|.+.... ......+|..++.|++++++.+++.
T Consensus 126 i~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~~-~~~~~~~Ev~~~~wv~~~el~~~l~ 192 (235)
T 2dho_A 126 IPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRMNV-TLNPDPNEIKSYCYVSKEELKELLK 192 (235)
T ss_dssp CCGGGSCGGGSEEEEEEEEEEECSSSBEEEEEEEEEEEECCC-CCCCCTTTEEEEEEECHHHHHHHHH
T ss_pred CCccccChhhcEEEEEEEEeccCCCccceeEEEEEEEEEECC-CCcCChHHEEEEEEEcHHHHHHHHh
Confidence 98652 3567776665543222 1223556555432 2222345788999999999988753
No 71
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.60 E-value=1.1e-14 Score=113.66 Aligned_cols=117 Identities=21% Similarity=0.278 Sum_probs=81.9
Q ss_pred CceEEEEEEEEEeecCCCCCCcCCC-eEEEEEEeeCC----CCCEEeccccCCCCCC--------------------HHH
Q 030372 21 GRRQVVGCVPYRYKTGDGAGNVVDD-IEVLVITSQKG----SQGMMFPKGGWELDET--------------------VKE 75 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~~~~~~~~~~-~~vLLv~~~~~----~~~W~lPgG~ve~gEs--------------------~~e 75 (178)
..|.++++|+++.. .++ .+|||++|... +|.|.||||+++++|+ +..
T Consensus 6 ~~r~aA~lill~~~--------~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~ 77 (232)
T 3qsj_A 6 DIRKAATLVVIRDG--------ANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAV 77 (232)
T ss_dssp CEEEEEEEEEEEEC--------GGGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHH
T ss_pred CCcceEEEEEEEcC--------CCCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHH
Confidence 57888999988865 233 69999998765 3789999999999997 599
Q ss_pred HHHHHHhhhhceeeccc---------------------------------------eeeeEE-EeeecC-CCcEEEEEEE
Q 030372 76 AALRESFEEAGVMGNVE---------------------------------------HELGKW-NFLSKS-RGTFYEGYMF 114 (178)
Q Consensus 76 aa~REv~EEtGl~~~~~---------------------------------------~~~~~~-~~~~~~-~~~~~~~~~~ 114 (178)
||+||++||||+.+... ..+..+ .+..+. ....+...+|
T Consensus 78 aAiRE~~EE~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~arWiTP~~~~rRfdT~FF 157 (232)
T 3qsj_A 78 TALRETAEEIGWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGRFVTPPTQPVRFDTRFF 157 (232)
T ss_dssp HHHHHHHHHHSCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEEEECCTTSSSEEEEEEE
T ss_pred HHHHHHHHHhCceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEEEcCCcCCceeEEEEEE
Confidence 99999999999974211 011111 111111 1235667788
Q ss_pred EEEeccccc-cCCccceeeeEEEeHHHHHHHh
Q 030372 115 PLLVTEQLE-LWPEKDVRQRIWMSVAEAREAC 145 (178)
Q Consensus 115 ~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~~ 145 (178)
.+....... .....|..+..|++++++.+..
T Consensus 158 la~lpq~~~v~~d~~E~~~~~W~~p~eal~~~ 189 (232)
T 3qsj_A 158 LCVGQHLGEPRLHGAELDAALWTPARDMLTRI 189 (232)
T ss_dssp EEECSSCCCCCCCSSSEEEEEEEEHHHHHHHH
T ss_pred EEECCCCCCCCCCCCceEEEEEEcHHHHHHHH
Confidence 777663221 3355689999999999998665
No 72
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.60 E-value=2.6e-14 Score=112.56 Aligned_cols=128 Identities=13% Similarity=0.095 Sum_probs=85.4
Q ss_pred CCceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCC----CCCEEecc-ccCCCC------CCH---HHHHHHHHhhhh
Q 030372 20 MGRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKG----SQGMMFPK-GGWELD------ETV---KEAALRESFEEA 85 (178)
Q Consensus 20 ~~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~----~~~W~lPg-G~ve~g------Es~---~eaa~REv~EEt 85 (178)
+..+.++++++++.+ + +|||.+|... ||.|.+|+ |++++| |++ .+||+||++|||
T Consensus 67 g~~h~av~v~v~~~~---------g--~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EEl 135 (246)
T 2pny_A 67 GLLHRAFSVVLFNTK---------N--RILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAEL 135 (246)
T ss_dssp TCCEEEEEEEEECTT---------C--CEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEEEEEeCC---------C--EEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHH
Confidence 345667777777543 2 7888877543 37899995 999999 887 999999999999
Q ss_pred ceeecc-----ceeeeEEEeeecCCCc---EEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHhcc---------c
Q 030372 86 GVMGNV-----EHELGKWNFLSKSRGT---FYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREACRH---------G 148 (178)
Q Consensus 86 Gl~~~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~---------~ 148 (178)
|+.+.. ..+++.+.|....... ....++|.+.... ......+|..++.|++++++.+++.. +
T Consensus 136 Gi~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~~-~~~~~~~Ev~~~~wv~~eel~~~l~~~~~~~~~ftp 214 (246)
T 2pny_A 136 GIPGEQISPEDIVFMTIYHHKAKSDRIWGEHEICYLLLVRKNV-TLNPDPSETKSILYLSQEELWELLEREARGEVKVTP 214 (246)
T ss_dssp CCCTTTCCGGGSEEEEEEEEEEESSSSBEEEEEEEEEEEECCC-CCCCCTTTEEEEEEECHHHHHHHHHHHHHTSSCBCH
T ss_pred CCCccccCccccEEEEEEEEEecCCCceeeeEEEEEEEEEECC-CCCCChHHeeEEEEEeHHHHHHHHHhccCCCceECH
Confidence 998652 3566766665443222 1223456555432 22223458889999999999887533 3
Q ss_pred hHHHHHHHHHH
Q 030372 149 WMKEALDILVE 159 (178)
Q Consensus 149 ~~~~~l~~~~~ 159 (178)
+++.++..++.
T Consensus 215 ~~~~i~~~~l~ 225 (246)
T 2pny_A 215 WLRTIAERFLY 225 (246)
T ss_dssp HHHHHHHHTHH
T ss_pred hHHHHHHHHHH
Confidence 45555555553
No 73
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.55 E-value=2.5e-13 Score=109.53 Aligned_cols=120 Identities=16% Similarity=0.175 Sum_probs=84.3
Q ss_pred CCceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCC----CCCE-EeccccCCCCCCHHHHHHHHHhhhhceeeccc--
Q 030372 20 MGRRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKG----SQGM-MFPKGGWELDETVKEAALRESFEEAGVMGNVE-- 92 (178)
Q Consensus 20 ~~~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~----~~~W-~lPgG~ve~gEs~~eaa~REv~EEtGl~~~~~-- 92 (178)
+..+..|-+.+|+.+ +++.++||.+|... ||.| .+++|++++|||+.+||+||+.||+|+.....
T Consensus 115 G~~~~~vh~~~~~~~--------~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~~~~~ 186 (300)
T 3dup_A 115 GVRAYGVHLNGYVGA--------GADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEALARQ 186 (300)
T ss_dssp TCCEEEEEEEEEESC--------GGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHHHHTT
T ss_pred ceEEEEEEEEEEEec--------CCeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChhhhhh
Confidence 346667778888776 34557877776644 4889 59999999999999999999999999986532
Q ss_pred -eeeeEEEeeecCCCcE--EEEEEEEEEeccccc-cCCccceeeeEEEeHHHHHHHhcc
Q 030372 93 -HELGKWNFLSKSRGTF--YEGYMFPLLVTEQLE-LWPEKDVRQRIWMSVAEAREACRH 147 (178)
Q Consensus 93 -~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~~~~ 147 (178)
...+.+.|........ ...++|.+....... ...++|..++.|++++++.+++..
T Consensus 187 l~~~g~i~y~~~~~~G~~~E~~~vy~~~l~~~~~p~~~~~EV~~~~~v~~~El~~~l~~ 245 (300)
T 3dup_A 187 AIPVGAITYCMESPAGIKPDTLFLYDLALPEDFRPHNTDGEMADFMLWPAAKVVEAVRT 245 (300)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEEEEEECCTTCCCCCTTSSEEEEEEEEHHHHHHHHHH
T ss_pred ccccceEEEEEecCCCeEEEEEEEEEEEecCCCcCCCCchHhheEEEECHHHHHHHHhc
Confidence 3455555544322222 233566665543332 334458889999999999998865
No 74
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.52 E-value=6e-14 Score=108.51 Aligned_cols=117 Identities=14% Similarity=0.098 Sum_probs=71.5
Q ss_pred EEEEEEeeCCCCCEEeccccCCCCC-CHHHHHHHHHhhhhceeeccc--eeeeEEE-eeecCCCcEEEEEEEEEEecccc
Q 030372 47 EVLVITSQKGSQGMMFPKGGWELDE-TVKEAALRESFEEAGVMGNVE--HELGKWN-FLSKSRGTFYEGYMFPLLVTEQL 122 (178)
Q Consensus 47 ~vLLv~~~~~~~~W~lPgG~ve~gE-s~~eaa~REv~EEtGl~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 122 (178)
++||+.+. . +.|.||||++++|| |+++||+||++||||+.+... ..+..+. +.... ......+|.+......
T Consensus 66 ~~ll~~r~-~-g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~~~~~--~~~~~~~f~~~l~~~~ 141 (217)
T 2xsq_A 66 AILMQMRF-D-GRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSHVGSG--PRVVAHFYAKRLTLEE 141 (217)
T ss_dssp EEEEEEET-T-SCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEECSS--SSEEEEEEEEECCHHH
T ss_pred cEEEEEcc-C-CeEECCceecCCCCCCHHHHHHHHHHHHHCCCCccceeEEEEEEeecCCCC--CeEEEEEEEEEecccc
Confidence 45555544 4 89999999999999 999999999999999997642 2222222 22111 1233455666553321
Q ss_pred c----------cCCccceeeeEEEeHHHHHHH-------hccchHHHHHHHHHHHHhccccc
Q 030372 123 E----------LWPEKDVRQRIWMSVAEAREA-------CRHGWMKEALDILVERLSSRVQQ 167 (178)
Q Consensus 123 ~----------~~~~~e~~~~~W~~~~el~~~-------~~~~~~~~~l~~~~~~l~~~~~~ 167 (178)
. .....|..++.|++++++.+. +....+..+..++++.+++..+-
T Consensus 142 ~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~d~~~~~P~~L~~~~l~~~~~~i~~~l~~~~~~ 203 (217)
T 2xsq_A 142 LLAVEAGATRAKDHGLEVLGLVRVPLYTLRDGVGGLPTFLENSFIGSAREQLLEALQDLGLL 203 (217)
T ss_dssp HHHHHHHGGGSTTBTTTEEEEEECCCSBCTTSSTBHHHHTTSCBCTTHHHHHHHHHHHTTTT
T ss_pred ceecccccccccccCCceeeEEEEEHHHhhhccccCcHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 1 122347788899999887521 12222334556666666654443
No 75
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=99.52 E-value=2.3e-14 Score=116.78 Aligned_cols=117 Identities=15% Similarity=0.122 Sum_probs=88.4
Q ss_pred ceEEEEEEEEEeecCCCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhh-ceeeccceeeeEEEe
Q 030372 22 RRQVVGCVPYRYKTGDGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEA-GVMGNVEHELGKWNF 100 (178)
Q Consensus 22 ~r~~~g~i~~~~~~~~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEt-Gl~~~~~~~~~~~~~ 100 (178)
++..||+|+.+.+ +|||+ .+. | |.||||.+ +++..++|+||++||| |++++...++..|+.
T Consensus 182 p~~~vgaii~~~g------------~vLL~--~~~-G-W~LPG~~~--~~~~~~~a~RE~~EEttGl~v~~~~L~~v~~~ 243 (321)
T 3rh7_A 182 GEIRLGAVLEQQG------------AVFLA--GNE-T-LSLPNCTV--EGGDPARTLAAYLEQLTGLNVTIGFLYSVYED 243 (321)
T ss_dssp SCEEEEEEEESSS------------CEEEB--CSS-E-EBCCEEEE--SSSCHHHHHHHHHHHHHSSCEEEEEEEEEEEC
T ss_pred CcceEEEEEEECC------------EEEEe--eCC-C-ccCCcccC--CCChhHHHHHHHHHHhcCCEEeeceEEEEEEc
Confidence 5778999998765 89999 344 7 99998755 4555569999999997 999998888888764
Q ss_pred eecCCCcEEEEEEEEEEeccccccCCccceeeeEEEeHHHHHHHh-ccchHHHHHHHHHHHHhccccc
Q 030372 101 LSKSRGTFYEGYMFPLLVTEQLELWPEKDVRQRIWMSVAEAREAC-RHGWMKEALDILVERLSSRVQQ 167 (178)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~-~~~~~~~~l~~~~~~l~~~~~~ 167 (178)
... . ....+|.+...... ..+++||++++|+... .++.++.+|+.+++..+.+.++
T Consensus 244 ~~~--~--~~~i~f~~~~~~g~-------~~e~~~f~~~elp~~~~~~~~~~~~L~~y~~e~~~g~f~ 300 (321)
T 3rh7_A 244 KSD--G--RQNIVYHALASDGA-------PRQGRFLRPAELAAAKFSSSATADIINRFVLESSIGNFG 300 (321)
T ss_dssp TTT--C--CEEEEEEEEECSSC-------CSSSEEECHHHHTTCEESSHHHHHHHHHHHHTTSCSSCC
T ss_pred CCC--c--eEEEEEEEEeCCCC-------eeeeEEECHHHCCCcccCCHHHHHHHHHHHHHhhcCCCC
Confidence 421 1 23357777664332 2678999999998764 5688999999999877777655
No 76
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.29 E-value=8.5e-12 Score=93.80 Aligned_cols=93 Identities=12% Similarity=-0.000 Sum_probs=62.8
Q ss_pred CceEEEEEEEEEeecC--CCCCCcCCCeEEEEEEeeCCCCCEEeccccCCCCC-CHHHHHHHHHhhhhce-eeccceeee
Q 030372 21 GRRQVVGCVPYRYKTG--DGAGNVVDDIEVLVITSQKGSQGMMFPKGGWELDE-TVKEAALRESFEEAGV-MGNVEHELG 96 (178)
Q Consensus 21 ~~r~~~g~i~~~~~~~--~~~~~~~~~~~vLLv~~~~~~~~W~lPgG~ve~gE-s~~eaa~REv~EEtGl-~~~~~~~~~ 96 (178)
..|.++-|..+-.++. -+. -.-...+|+|.+.. |.|.||||++|+|| |+++|+.||+.||+|+ .+....++.
T Consensus 19 ~~~hach~mlya~~~~~lfg~---~p~r~~iLmQ~R~~-G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V~~~~y~~ 94 (214)
T 3kvh_A 19 GWSHSCHAMLYAANPGQLFGR---IPMRFSVLMQMRFD-GLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRLTEADYLS 94 (214)
T ss_dssp TCEEEEEEEEEEEEEEEETTT---EEEEEEEEEEEETT-SCEECSEEEECTTTCCHHHHHHHSCCSCC---CCCGGGEEE
T ss_pred CccEeeEEEEEcCCccccccc---cchhheEEEeeeeC-CEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeeeeeeeeEE
Confidence 5799999999887621 000 01123577788887 99999999999999 9999999999999997 466556666
Q ss_pred EEEeeecCCCcEEEEEEEEEEecc
Q 030372 97 KWNFLSKSRGTFYEGYMFPLLVTE 120 (178)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~ 120 (178)
+..+.++ ......+|.+....
T Consensus 95 s~~~~yp---~~V~LHfY~crl~~ 115 (214)
T 3kvh_A 95 SHLTEGP---HRVVAHLYARQLTL 115 (214)
T ss_dssp EEEC-------CEEEEEEEEECCH
T ss_pred EEeccCC---CEEEEEEEEEEeeC
Confidence 6555543 12344667666543
No 77
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=99.27 E-value=1.4e-11 Score=93.39 Aligned_cols=96 Identities=16% Similarity=0.076 Sum_probs=62.8
Q ss_pred CCeEEEEEEeeCCCCCEEeccccCCCCCCHHHHHHHHHhhhhc------eeeccceeeeEEEeeecCC-----------C
Q 030372 44 DDIEVLVITSQKGSQGMMFPKGGWELDETVKEAALRESFEEAG------VMGNVEHELGKWNFLSKSR-----------G 106 (178)
Q Consensus 44 ~~~~vLLv~~~~~~~~W~lPgG~ve~gEs~~eaa~REv~EEtG------l~~~~~~~~~~~~~~~~~~-----------~ 106 (178)
+..+|||+|+. . +.|.||||++++||++++|+.||+.||+| ..+.+.++++.|....-.. +
T Consensus 71 ~~phVLLlq~~-~-~~f~LPGGkle~gE~~~eaL~REL~EELg~~~~~~~~~eIge~lg~wwRp~fet~~YPYlP~Hit~ 148 (208)
T 3bho_A 71 RLPHVLLLQLG-T-TFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWRPNFEPPQYPYIPAHITK 148 (208)
T ss_dssp TEEEEEEEEEE-T-TEEECSEEECCTTCCHHHHHHHHHHHHHCCCC-----CEEEEEEEEEEECSSSSCCBSSCCTTCCS
T ss_pred CCcEEEEEEcC-C-CcEECCCcccCCCCCHHHHHHHHHHHHhCCCcCCCccEEEhheEEEEecCCCCCcCCCCCCcccCc
Confidence 45689999974 4 78999999999999999999999999999 4566678888864222110 0
Q ss_pred cEEEEEEEEEEeccccc-cCCccceeeeEEEeHHHHHH
Q 030372 107 TFYEGYMFPLLVTEQLE-LWPEKDVRQRIWMSVAEARE 143 (178)
Q Consensus 107 ~~~~~~~~~~~~~~~~~-~~~~~e~~~~~W~~~~el~~ 143 (178)
---...+|.+....... ..| ...+..=+++-|+.+
T Consensus 149 pKE~~kly~V~Lp~~~~f~vP--kn~kL~AvPLfely~ 184 (208)
T 3bho_A 149 PKEHKKLFLVQLQEKALFAVP--KNYKLVAAPLFELYD 184 (208)
T ss_dssp CSEEEEEEEEECCSSEEEEEE--TTCEEEEEEHHHHTT
T ss_pred hhhheeeeeEecCccceEecC--CCCeEEeecHHhhhc
Confidence 01234566665443221 112 244556677777754
No 78
>1vig_A Vigilin; RNA-binding protein, ribonucleoprotein; NMR {Homo sapiens} SCOP: d.51.1.1 PDB: 1vih_A
Probab=29.00 E-value=24 Score=21.13 Aligned_cols=16 Identities=6% Similarity=0.019 Sum_probs=13.3
Q ss_pred HHHHHhhhhceeeccc
Q 030372 77 ALRESFEEAGVMGNVE 92 (178)
Q Consensus 77 a~REv~EEtGl~~~~~ 92 (178)
-+|++.||||+++.+.
T Consensus 26 ~I~~I~e~tg~~I~i~ 41 (71)
T 1vig_A 26 NINRIKDQYKVSVRIP 41 (71)
T ss_dssp HHHHHHHHTCCEEECC
T ss_pred cHHHHHHHHCCEEEEC
Confidence 3799999999998754
No 79
>3vej_A Ubiquitin-like protein MDY2; alpha helical, dimerization, homodimerization, protein bindi; 1.23A {Saccharomyces cerevisiae}
Probab=27.23 E-value=46 Score=18.08 Aligned_cols=29 Identities=14% Similarity=0.160 Sum_probs=15.2
Q ss_pred EeHHHHHHHhcc--chHHHHHHHHHHHHhcc
Q 030372 136 MSVAEAREACRH--GWMKEALDILVERLSSR 164 (178)
Q Consensus 136 ~~~~el~~~~~~--~~~~~~l~~~~~~l~~~ 164 (178)
+|+++|...+.. .+..++....++||+++
T Consensus 6 VPWd~Ie~lL~~~~~d~~~a~~~~L~RLqkG 36 (41)
T 3vej_A 6 VPWDDIEALLKNNFENDQAAVRQVMERLQKG 36 (41)
T ss_dssp SCHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHhcChHHHHHHHHHHHHhc
Confidence 466666666532 22233333667777653
No 80
>2bsj_A Chaperone protein SYCT; type III secretion, effector, YOPT; 1.83A {Yersinia enterocolitica} PDB: 2bho_A 2bsh_A 2bsi_A
Probab=26.68 E-value=60 Score=21.79 Aligned_cols=31 Identities=16% Similarity=0.272 Sum_probs=23.7
Q ss_pred chHHHHHHHHHHHHhccccc-cccccccCCCC
Q 030372 148 GWMKEALDILVERLSSRVQQ-KEETVKRPCSP 178 (178)
Q Consensus 148 ~~~~~~l~~~~~~l~~~~~~-~~~~~~~~~~~ 178 (178)
..+...+..|++.+..|.-| .-+.+++|+||
T Consensus 98 aelqAWlErFIdDieqr~~p~~t~~~~n~~~~ 129 (133)
T 2bsj_A 98 DEMQAWLERFIDDIEQRKEPQNTKFQPNSTSP 129 (133)
T ss_dssp HHHHHHHHHHHHHHHHHTSGGGGSCCCCCCSC
T ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCCCCCC
Confidence 34456677788888877766 88888899887
No 81
>2ctk_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=21.82 E-value=38 Score=22.03 Aligned_cols=17 Identities=24% Similarity=0.286 Sum_probs=13.8
Q ss_pred HHHHHHhhhhceeeccc
Q 030372 76 AALRESFEEAGVMGNVE 92 (178)
Q Consensus 76 aa~REv~EEtGl~~~~~ 92 (178)
.-+|++.||||+++.+.
T Consensus 37 ~~Ir~I~eetg~~I~I~ 53 (104)
T 2ctk_A 37 SGIRKMMDEFEVNIHVP 53 (104)
T ss_dssp HHHHHHHHHTCCEEECC
T ss_pred hHHHHHHHHHCCEEEec
Confidence 35899999999997653
No 82
>2opv_A KHSRP protein; KH domain, RNA binding protein, KSRP; NMR {Homo sapiens}
Probab=20.19 E-value=44 Score=20.67 Aligned_cols=17 Identities=24% Similarity=0.216 Sum_probs=13.7
Q ss_pred HHHHHHhhhhceeeccc
Q 030372 76 AALRESFEEAGVMGNVE 92 (178)
Q Consensus 76 aa~REv~EEtGl~~~~~ 92 (178)
.-+|++.|+||.++.+.
T Consensus 34 ~~Ik~I~~~tga~I~i~ 50 (85)
T 2opv_A 34 ETIKQLQERAGVKMILI 50 (85)
T ss_dssp HHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHCCEEEEc
Confidence 35799999999987654
Done!