Query 030373
Match_columns 178
No_of_seqs 197 out of 1287
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 20:43:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030373.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030373hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u1n_A SAM domain and HD domai 100.0 3.4E-41 1.2E-45 309.4 12.2 134 29-163 17-150 (528)
2 3irh_A HD domain protein; phos 100.0 5.1E-41 1.7E-45 305.6 8.3 135 27-169 35-181 (480)
3 2q14_A Phosphohydrolase; BT420 100.0 9.2E-39 3.1E-43 286.6 10.6 128 28-164 5-133 (410)
4 2hek_A Hypothetical protein; p 100.0 7E-35 2.4E-39 258.2 8.8 129 29-176 2-135 (371)
5 2pgs_A Putative deoxyguanosine 100.0 2E-30 6.7E-35 235.0 6.4 134 41-176 28-184 (451)
6 3bg2_A DGTP triphosphohydrolas 100.0 7.6E-30 2.6E-34 230.7 5.8 133 41-175 30-189 (444)
7 2dqb_A Deoxyguanosinetriphosph 99.9 9.6E-28 3.3E-32 213.1 9.4 121 41-175 41-166 (376)
8 3b57_A LIN1889 protein; Q92AN1 98.6 5.6E-08 1.9E-12 78.7 6.5 69 78-176 26-94 (209)
9 2pq7_A Predicted HD superfamil 98.6 5.1E-08 1.7E-12 79.1 4.9 76 75-176 31-106 (220)
10 3dto_A BH2835 protein; all alp 98.5 2.3E-07 7.8E-12 76.6 7.6 70 76-176 25-94 (223)
11 3gw7_A Uncharacterized protein 98.4 1.7E-07 5.9E-12 78.2 4.8 75 76-176 25-101 (239)
12 2pjq_A Uncharacterized protein 98.4 5.6E-07 1.9E-11 74.1 7.3 69 78-176 31-99 (231)
13 3djb_A Hydrolase, HD family; a 98.4 2.3E-07 7.7E-12 76.6 4.8 70 76-176 25-94 (223)
14 2qgs_A Protein Se1688; alpha-h 98.3 8E-07 2.7E-11 72.7 6.6 68 78-176 26-94 (225)
15 3ccg_A HD superfamily hydrolas 98.2 3.3E-06 1.1E-10 67.0 7.9 40 77-127 19-58 (190)
16 2o08_A BH1327 protein; putativ 98.2 2.8E-06 9.6E-11 67.4 7.1 72 77-165 18-98 (188)
17 2ogi_A Hypothetical protein SA 98.0 3.8E-06 1.3E-10 67.1 4.1 39 77-126 26-64 (196)
18 1zkl_A HCP1, TM22, high-affini 97.8 0.00012 4.2E-09 64.1 10.0 95 73-172 80-178 (353)
19 1tbf_A CGMP-specific 3',5'-cyc 97.6 0.00031 1.1E-08 61.4 10.2 89 73-166 98-188 (347)
20 3tm8_A BD1817, uncharacterized 97.6 4.3E-05 1.5E-09 65.7 4.4 43 76-126 165-208 (328)
21 1f0j_A PDE4B, phosphodiesteras 97.6 0.00022 7.4E-09 63.1 8.3 89 73-166 80-170 (377)
22 1taz_A Calcium/calmodulin-depe 97.5 0.00026 8.7E-09 62.4 8.1 89 72-165 78-168 (365)
23 1y2k_A DPDE3, PDE43, CAMP-spec 97.5 0.00038 1.3E-08 60.8 8.8 89 73-166 93-183 (349)
24 2our_A CAMP and CAMP-inhibited 97.3 0.00088 3E-08 58.1 9.1 87 72-166 76-164 (331)
25 2r8q_A Class I phosphodiestera 97.3 0.0014 4.7E-08 57.6 9.8 90 72-166 96-190 (359)
26 3i7a_A Putative metal-dependen 97.2 0.00018 6.1E-09 60.0 3.7 47 78-128 118-164 (281)
27 3hc1_A Uncharacterized HDOD do 97.2 0.00015 5.1E-09 61.3 2.8 43 77-129 118-160 (305)
28 3bjc_A CGMP-specific 3',5'-cyc 97.1 0.0016 5.5E-08 62.3 9.4 87 73-166 613-702 (878)
29 3sk9_A Putative uncharacterize 97.1 0.0015 5.1E-08 55.1 8.0 86 75-166 23-128 (265)
30 3v93_A Cyclic nucleotide speci 97.0 0.001 3.6E-08 58.1 6.1 58 72-133 95-152 (345)
31 3itu_A CGMP-dependent 3',5'-cy 97.0 0.0014 4.6E-08 57.4 6.7 57 72-133 78-134 (345)
32 3ljx_A MMOQ response regulator 97.0 0.00076 2.6E-08 56.6 4.9 75 78-166 109-195 (288)
33 3ecm_A High affinity CAMP-spec 96.9 0.0012 4.2E-08 57.3 6.2 56 73-133 72-127 (338)
34 3g4g_A DPDE3, PDE43, CAMP-spec 96.7 0.0023 8E-08 57.4 5.9 55 74-133 160-214 (421)
35 3dyn_A High affinity CGMP-spec 96.7 0.0017 5.8E-08 56.4 4.9 57 72-133 71-127 (329)
36 3m5f_A Metal dependent phospho 96.6 0.0083 2.8E-07 50.3 8.7 91 69-163 10-106 (244)
37 3qi3_A High affinity CGMP-spec 96.6 0.0039 1.3E-07 57.5 7.1 57 72-133 248-304 (533)
38 3ibj_A CGMP-dependent 3',5'-cy 96.5 0.0045 1.5E-07 57.3 7.0 57 72-133 439-495 (691)
39 3rf0_A Exopolyphosphatase; str 96.5 0.0037 1.3E-07 50.4 5.7 43 79-125 21-65 (209)
40 3m1t_A Putative phosphohydrola 96.5 0.0021 7.1E-08 53.5 4.0 40 78-128 106-145 (275)
41 3hr1_A CAMP and CAMP-inhibited 96.4 0.0048 1.6E-07 54.7 6.5 54 73-133 108-161 (380)
42 1vqr_A Hypothetical protein CJ 96.4 0.0035 1.2E-07 52.4 5.0 43 78-130 125-167 (297)
43 3mem_A Putative signal transdu 96.3 0.0031 1.1E-07 56.4 4.3 49 76-132 277-326 (457)
44 3kq5_A Hypothetical cytosolic 96.3 0.0051 1.7E-07 54.8 5.6 49 71-126 65-118 (393)
45 1so2_A CGMP-inhibited 3',5'-cy 95.4 0.014 4.7E-07 52.3 4.6 61 72-133 80-180 (420)
46 2paq_A 5'-deoxynucleotidase YF 94.8 0.036 1.2E-06 44.6 5.0 62 55-124 12-73 (201)
47 2ibn_A Inositol oxygenase; red 94.5 0.011 3.7E-07 49.7 1.3 44 72-130 54-99 (250)
48 2cqz_A 177AA long hypothetical 94.4 0.058 2E-06 42.3 5.4 44 75-124 30-73 (177)
49 1u6z_A Exopolyphosphatase; alp 94.1 0.16 5.4E-06 46.1 8.2 45 79-125 330-374 (513)
50 1ynb_A Hypothetical protein AF 93.3 0.14 4.8E-06 40.6 5.6 60 54-124 16-77 (173)
51 3hi0_A Putative exopolyphospha 93.2 0.14 4.8E-06 46.4 6.3 42 79-126 333-374 (508)
52 3aql_A Poly(A) polymerase; tra 92.9 0.36 1.2E-05 42.8 8.3 107 45-176 222-344 (415)
53 1xx7_A Oxetanocin-like protein 89.5 0.55 1.9E-05 37.2 5.4 44 75-124 35-78 (184)
54 1vfg_A A-adding enzyme, poly A 87.6 0.79 2.7E-05 39.9 5.6 72 45-125 195-270 (390)
55 3mzo_A LIN2634 protein; HD-dom 84.0 2.6 8.8E-05 34.1 6.6 61 55-124 11-71 (216)
56 3kh1_A Predicted metal-depende 78.6 0.96 3.3E-05 36.4 2.2 40 76-124 39-78 (200)
57 2gz4_A Hypothetical protein AT 74.5 2.7 9.4E-05 34.0 3.9 67 32-124 21-88 (207)
58 1ou5_A TRNA CCA-adding enzyme, 71.5 2.2 7.4E-05 38.1 2.8 62 45-125 255-319 (448)
59 4dmb_A HD domain-containing pr 60.8 3.5 0.00012 33.2 1.8 55 55-124 24-80 (204)
60 3nr1_A HD domain-containing pr 57.9 3.1 0.00011 32.6 1.0 32 79-124 32-63 (178)
61 3nqw_A CG11900; stringent resp 54.0 3.6 0.00012 32.2 0.7 32 79-124 34-65 (179)
62 1vj7_A Bifunctional RELA/SPOT; 47.7 15 0.0005 32.4 3.7 30 79-124 51-80 (393)
63 1miw_A TRNA CCA-adding enzyme; 47.5 11 0.00036 33.0 2.8 14 112-125 248-261 (404)
64 3qbe_A 3-dehydroquinate syntha 44.9 11 0.00038 32.6 2.5 28 121-155 251-279 (368)
65 3okf_A 3-dehydroquinate syntha 41.2 14 0.00048 32.3 2.6 28 122-155 272-300 (390)
66 2omk_A Hypothetical protein; s 39.6 27 0.00094 28.2 3.9 41 54-94 107-148 (231)
67 2lbf_A 60S acidic ribosomal pr 34.4 32 0.0011 22.9 2.9 20 109-128 5-24 (69)
68 2huo_A Inositol oxygenase; pro 31.7 20 0.00068 30.5 1.9 15 112-126 118-132 (289)
69 3lm8_A Thiamine pyrophosphokin 31.2 40 0.0014 26.9 3.6 36 58-93 86-121 (222)
70 3k94_A Thiamin pyrophosphokina 27.4 43 0.0015 26.9 3.1 34 58-91 85-118 (223)
71 3lo3_A Uncharacterized conserv 25.5 40 0.0014 23.2 2.3 28 40-67 58-87 (94)
72 3l8m_A Probable thiamine pyrop 25.4 43 0.0015 26.5 2.8 35 58-92 82-116 (212)
73 3lma_A Stage V sporulation pro 23.6 44 0.0015 28.9 2.7 51 125-177 30-82 (347)
No 1
>3u1n_A SAM domain and HD domain-containing protein 1; deoxynucleotide triphosphohydrolase, hydrolase; 3.10A {Homo sapiens}
Probab=100.00 E-value=3.4e-41 Score=309.40 Aligned_cols=134 Identities=49% Similarity=0.848 Sum_probs=119.4
Q ss_pred cccccCCCCcceecChhHHHHhcCHHHHhHHhHhhhcccceecCCCCccccchHHHHHHHHHHHHHHHHHccCccCCCCH
Q 030373 29 SKNVHDNVHGNIYLDPLALKFIDTEQFQRLRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDN 108 (178)
Q Consensus 29 ~k~i~Dpv~g~i~~~~~~~~IIdt~~fqRLr~I~Qlg~~~~vyp~a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~ 108 (178)
.+.++|||||+|++++.+.+||+||+|||||+|+|+|.+++|||||+||||+|||||+++|+++++.|..++ +++++++
T Consensus 17 ~~~~~Dpvhg~I~l~~~~~riI~s~~FqRLr~i~Qlg~~~~v~pga~hTRf~HSLgV~~la~~i~~~l~~~~-~~~~~~~ 95 (528)
T 3u1n_A 17 FQGPGDPIHGHIELHPLLVRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVHALGEKQ-PELQISE 95 (528)
T ss_dssp ---CCBTTTBSCCCCHHHHHHHSSHHHHGGGGSBTTGGGTTTCTTCCCBHHHHHHHHHHHHHHHHHHHHHHC-GGGCCCH
T ss_pred cccccCCCCcCEEeCHHHHHHhCCHHHhhccCccccCCcccccCCCCcCHHHHHHHHHHHHHHHHHHHHhhC-cccCCCH
Confidence 456899999999999999999999999999999999999999999999999999999999999999998765 3567888
Q ss_pred HHHHHHHHHHHhhhcCCCCCCchhhhhhhhhccCCCCccHHHHHHHHHHHHHHhC
Q 030373 109 FDIQTVKLAGLLHDVGHGPFSHLFEREFLPRVVSGCKWSHEQMSLKMVDHIVDEH 163 (178)
Q Consensus 109 ~d~~~v~iAALlHDiGh~PfsH~~E~~~~~~~~~~~~~~HE~~s~~ii~~il~~~ 163 (178)
.|..++++|||||||||+||||++|.+|.+...++.+|+||++|.+|++.+++++
T Consensus 96 ~d~~~v~~AaLlHDiGH~PFsH~~E~~~~~~~~~~~~~~HE~~S~~i~~~li~~~ 150 (528)
T 3u1n_A 96 RDVLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPEVKWTHEQGSVMMFEHLINSN 150 (528)
T ss_dssp HHHHHHHHHHHHTTTTCBTTBHHHHHTHHHHHCTTSCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhccCCCCccchhhhhhhhhhcCCCCCCHHHHHHHHHHHHhccc
Confidence 8899999999999999999999999988765445568999999999987765443
No 2
>3irh_A HD domain protein; phosphohydrolase, dntpase, structural genomics, P protein structure initiative, midwest center for structural genomics; HET: DGT DTP; 2.40A {Enterococcus faecalis} PDB: 2o6i_A*
Probab=100.00 E-value=5.1e-41 Score=305.58 Aligned_cols=135 Identities=36% Similarity=0.612 Sum_probs=119.5
Q ss_pred hccccccCCCCcceecC-hhHHHHhcCHHHHhHHhHhhhcccceecCCCCccccchHHHHHHHHHHHHHHHHHccCc---
Q 030373 27 RFSKNVHDNVHGNIYLD-PLALKFIDTEQFQRLRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGAAIQKLKQNQGL--- 102 (178)
Q Consensus 27 ~~~k~i~Dpv~g~i~~~-~~~~~IIdt~~fqRLr~I~Qlg~~~~vyp~a~htRf~HSLGV~~la~~i~~~l~~~~~~--- 102 (178)
...|.|+|||||+|+++ +.+++||+||+|||||+|+|+|.+++|||||+||||+|||||+++|++++..|.++.+.
T Consensus 35 ~~~KvirDPVhG~I~l~~~~~~~iI~s~~FqRLr~i~QlG~~~~v~pga~HTRf~HSLgV~~la~~i~~~l~~~~~~~~~ 114 (480)
T 3irh_A 35 PIEKVFRDPVHNYIHVQHQVILDLINSAEVQRLRRIKQLGTSSFTFHGAEHSRFSHSLGVYEITRRICEIFQRNYSVERL 114 (480)
T ss_dssp EEEEEEEETTTEEEEEEEHHHHHHHTSHHHHGGGGSBSSTTGGGTSTTCCCBHHHHHHHHHHHHHHHHHHHHHHSBHHHH
T ss_pred cCCceeecCCceeEEECHHHHHHHhcCHHHHhhhhhhcccccceecCCCCcCHHHHHHHHHHHHHHHHHHHHhhCccccc
Confidence 45799999999999998 89999999999999999999999999999999999999999999999999999876432
Q ss_pred -cCCCCHHHHHHHHHHHHhhhcCCCCCCchhhhhhhhhccCCCCccHHHHHHHHHH-------HHHHhCCCCCCh
Q 030373 103 -ELGIDNFDIQTVKLAGLLHDVGHGPFSHLFEREFLPRVVSGCKWSHEQMSLKMVD-------HIVDEHHIDLDF 169 (178)
Q Consensus 103 -~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E~~~~~~~~~~~~~~HE~~s~~ii~-------~il~~~g~~~~~ 169 (178)
...+++.+..++++|||||||||+||||++|.++ +|+||++|.+|+. .+|++++.+..+
T Consensus 115 ~~~~~~~~~~~~v~~AaLlHDIGH~PFsH~~E~~~--------~~~HE~~s~~ii~~~~~ei~~iL~~~~~~~p~ 181 (480)
T 3irh_A 115 GENGWNDDERLITLCAALLHDVGHGPYSHTFEHIF--------DTNHEAITVQIITSPETEVYQILNRVSADFPE 181 (480)
T ss_dssp GGGSBCGGGHHHHHHHHHHTTTTCCTTHHHHHHHH--------CCCHHHHHHHHHHCTTSHHHHHHHHHCTTHHH
T ss_pred cccCCCHHHHHHHHHHHHHhccCCCCccchhhhcc--------CCCHHHHHHHHHHccchhHHHHHHHcCCCcHH
Confidence 1247777888999999999999999999999986 5899999999985 377777765333
No 3
>2q14_A Phosphohydrolase; BT4208, HD domain, structural genomics, JO center for structural genomics, JCSG; HET: MSE ADP; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=9.2e-39 Score=286.56 Aligned_cols=128 Identities=38% Similarity=0.632 Sum_probs=117.4
Q ss_pred ccccccCCCCcceecCh-hHHHHhcCHHHHhHHhHhhhcccceecCCCCccccchHHHHHHHHHHHHHHHHHccCccCCC
Q 030373 28 FSKNVHDNVHGNIYLDP-LALKFIDTEQFQRLRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGI 106 (178)
Q Consensus 28 ~~k~i~Dpv~g~i~~~~-~~~~IIdt~~fqRLr~I~Qlg~~~~vyp~a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i 106 (178)
..|.|+|||||+|.+++ .+++||+||+|||||+|+|+|.+++|||||+||||+|||||+++|+++++.+..++ ..+
T Consensus 5 ~~k~i~Dpvhg~I~~~~~~~~~ii~s~~fqRL~~~~Qlg~~~~v~p~a~htRf~HSLgV~~la~~l~~~l~~~~---~~~ 81 (410)
T 2q14_A 5 ERKIINDPVFGFINIPKGLLYDIVRHPLLQRLTRIKQVGLSSVVYPGAQHTRFQHSLGAFYLMSEAITQLTSKG---NFI 81 (410)
T ss_dssp CEEEEEETTTEEEEEETTHHHHHHHSHHHHGGGGSBTTTTTTTTCTTCCCBHHHHHHHHHHHHHHHHHHHHHTT---CCC
T ss_pred cceEEecCCCCcEEECHHHHHHHHCCHHHHhHhhhhccCCceeecCCCCCCeeehHHHHHHHHHHHHHHHHhcC---CCC
Confidence 46889999999999997 99999999999999999999999999999999999999999999999999988654 247
Q ss_pred CHHHHHHHHHHHHhhhcCCCCCCchhhhhhhhhccCCCCccHHHHHHHHHHHHHHhCC
Q 030373 107 DNFDIQTVKLAGLLHDVGHGPFSHLFEREFLPRVVSGCKWSHEQMSLKMVDHIVDEHH 164 (178)
Q Consensus 107 ~~~d~~~v~iAALlHDiGh~PfsH~~E~~~~~~~~~~~~~~HE~~s~~ii~~il~~~g 164 (178)
++.+..++++|||||||||+||||++|.++. .+|+||++|.++++.+.++.+
T Consensus 82 ~~~d~~~~~~AaLlHDiGh~PfsH~~E~~~~------~~~~He~~s~~ii~~l~~~i~ 133 (410)
T 2q14_A 82 FDSEAEAVQAAILLHDIGHGPFSHVLEDTIV------QGVSHEEISLMLMERMNKEMN 133 (410)
T ss_dssp CHHHHHHHHHHHHHTTTTCCTTHHHHHTTTS------TTCCHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHhccCCCccccccHHhhc------CCCCHHHHHHHHHHHhhhhHH
Confidence 8888999999999999999999999999763 379999999999998877643
No 4
>2hek_A Hypothetical protein; predominantly alpha helical protein with GDP binding site AN site being FAR from EACH other, structural genomics, PSI; HET: GDP; 2.00A {Aquifex aeolicus} SCOP: a.211.1.1
Probab=100.00 E-value=7e-35 Score=258.23 Aligned_cols=129 Identities=40% Similarity=0.645 Sum_probs=115.5
Q ss_pred cccccCCCCcceecChhHHHHhcCHHHHhHHhHhhhcccceecCCCCccccchHHHHHHHHHHHHHHHHHccCccCCCCH
Q 030373 29 SKNVHDNVHGNIYLDPLALKFIDTEQFQRLRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDN 108 (178)
Q Consensus 29 ~k~i~Dpv~g~i~~~~~~~~IIdt~~fqRLr~I~Qlg~~~~vyp~a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~ 108 (178)
.|.|+|||||+|++++.+.+|++||.|||||+|+|+|++++|||||+|+||+||+||+++|+.+++.+ +++.
T Consensus 2 ~k~i~Dpvhg~I~l~~~~~~ii~s~~fqRLr~i~QlG~~~~v~p~a~~~r~~Hsl~V~~~a~~ia~~~--------~~~~ 73 (371)
T 2hek_A 2 IKEFSDPLYGFVRVGEAGLRLIDSFPFQRLRYVKQLGLAYLVFPSAQHTRFEHSLGVYHITERICESL--------KVKE 73 (371)
T ss_dssp EEEEEETTTEEEEEEHHHHHHHTSHHHHGGGGSBTTTTGGGTSTTCCCBHHHHHHHHHHHHHHHHHHH--------TCTT
T ss_pred ceEEeeCCCCCeecChHHHHHhCCHHHhCccccCccCccceeeCCCCCChhHHHHHHHHHHHHHHHHc--------CCCH
Confidence 47899999999999999999999999999999999999999999999999999999999999999874 3443
Q ss_pred HHHHHHHHHHHhhhcCCCCCCchhhhhhhhhccCCCCccHHHHHHHHHH-----HHHHhCCCCCChhhhhhcc
Q 030373 109 FDIQTVKLAGLLHDVGHGPFSHLFEREFLPRVVSGCKWSHEQMSLKMVD-----HIVDEHHIDLDFEMIKKVK 176 (178)
Q Consensus 109 ~d~~~v~iAALlHDiGh~PfsH~~E~~~~~~~~~~~~~~HE~~s~~ii~-----~il~~~g~~~~~~~I~~I~ 176 (178)
. +++.+|||||||||+||||.+|..+ ..+++||++|.++++ .+|+++ ++ .++++.|+
T Consensus 74 ~--~~~~~AaLLHDiG~~pfsh~~e~~~------~~g~~He~~g~~i~~~~~i~~iL~~~-~~--~~~i~~I~ 135 (371)
T 2hek_A 74 K--ELVKLAGLLHDLGHPPFSHTTEVLL------PRERSHEDFTERVIKETEIYEILKQD-YS--HEDIERLV 135 (371)
T ss_dssp H--HHHHHHHHTTTTTCCSSSSCHHHHS------TTSSSCCCHHHHHHHHSHHHHHHHTT-SC--HHHHHHHH
T ss_pred H--HHHHHHHHHHhcCccccccchHHHh------ccCCCHHHHHHHHHhcchHHHHHHHh-CC--HHHHHHHH
Confidence 3 7899999999999999999999865 236999999999987 888887 55 78877664
No 5
>2pgs_A Putative deoxyguanosinetriphosphate triphosphohyd; deoxyguanosinetriphosphate triphsphohydrolase, pseudomonas S PV. phaseolicola 1448A; 2.35A {Pseudomonas syringae PV}
Probab=99.96 E-value=2e-30 Score=234.95 Aligned_cols=134 Identities=19% Similarity=0.219 Sum_probs=104.2
Q ss_pred ecChhHHHHhcCHHHHhHHhHhhhcccceecCCCCccccchHHHHHHHHHHHHHHHHHccCc--cCCCCHHHH-HHHHHH
Q 030373 41 YLDPLALKFIDTEQFQRLRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGAAIQKLKQNQGL--ELGIDNFDI-QTVKLA 117 (178)
Q Consensus 41 ~~~~~~~~IIdt~~fqRLr~I~Qlg~~~~vyp~a~htRf~HSLGV~~la~~i~~~l~~~~~~--~~~i~~~d~-~~v~iA 117 (178)
.+....++||+||+||||++|+|+|+. .||++.||||+|||||+++|+.++..|...... ..+++..+. .++++|
T Consensus 28 ~FqRD~~rii~s~~frRL~~~tQv~~~--~~~~~~htR~~Hsl~v~~ia~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~a 105 (451)
T 2pgs_A 28 PFHKDHDRIIFSGAFRRLGRKTQVHPV--SSNDHIHTRLTHSLEVSCVGRSLGMRVGETLRAALPDWCDPSDLGMVVQSA 105 (451)
T ss_dssp CHHHHHHHHHHSHHHHGGGGCCCCCC---------CCHHHHHHHHHHHHHHHHHHHHHHTGGGSCTTCCHHHHHHHHHHH
T ss_pred hHHHHHHHHhCCHHHhhhccCCcccCC--CCCCCcccHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHH
Confidence 455678999999999999999999986 599999999999999999999999999863111 124666665 499999
Q ss_pred HHhhhcCCCCCCchhhhhhhhhccC--CC---------------CccHHHHHHHHHHHHHH---hCCCCCChhhhhhcc
Q 030373 118 GLLHDVGHGPFSHLFEREFLPRVVS--GC---------------KWSHEQMSLKMVDHIVD---EHHIDLDFEMIKKVK 176 (178)
Q Consensus 118 ALlHDiGh~PfsH~~E~~~~~~~~~--~~---------------~~~HE~~s~~ii~~il~---~~g~~~~~~~I~~I~ 176 (178)
||+|||||+||||++|.++...+.. +. +|+|+.+|.+|+..+.. ..|+|++.+.++-|.
T Consensus 106 ~L~HDiGH~PFgH~gE~~l~~~~~~~gg~~~~~~l~~~~~~D~~~fehnaqs~Ril~~l~~~~~~~GlnLT~~~l~gil 184 (451)
T 2pgs_A 106 CLAHDIGNPPFGHSGEDAIRNWFNQAAGRGWLDAMSETERNDFLNFEGNAQGFRVLTQLEYHQFDGGTRLTYATLGTYL 184 (451)
T ss_dssp HHHTTTTCCTTHHHHHHHHHHHHHHHHTTTTTTTSCHHHHHHHHTCCHHHHHHHHHHTTSSBTTTTBTCCBHHHHHHHC
T ss_pred HHhhccCCCCccccHHHHHHHHHHhcCCcchhhhcchhhhccccCCchhHHHHHHHHHHhhccccCCCCCCHHHHHHHH
Confidence 9999999999999999987543321 11 49999999999999875 368999998887653
No 6
>3bg2_A DGTP triphosphohydrolase; structural genomics, NYSGXRC, target 10395N, triphosphohydro PSI-2, protein structure initiative; 1.95A {Leeuwenhoekiella blandensis}
Probab=99.96 E-value=7.6e-30 Score=230.75 Aligned_cols=133 Identities=21% Similarity=0.230 Sum_probs=106.3
Q ss_pred ecChhHHHHhcCHHHHhHHhHhhhcccceecCCCCccccchHHHHHHHHHHHHHHHHHc----cCc---cCCCCHHH-HH
Q 030373 41 YLDPLALKFIDTEQFQRLRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGAAIQKLKQN----QGL---ELGIDNFD-IQ 112 (178)
Q Consensus 41 ~~~~~~~~IIdt~~fqRLr~I~Qlg~~~~vyp~a~htRf~HSLGV~~la~~i~~~l~~~----~~~---~~~i~~~d-~~ 112 (178)
.+....++||+||+||||++|+|+|+.. +|++.||||+|||||+++|+.++..|..+ .+. ..++++++ ..
T Consensus 30 ~FqRD~~rii~s~~frRL~~ktQv~~~~--~~~~~htRltHSL~V~~iar~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 107 (444)
T 3bg2_A 30 GFEVDYDRIIFSAPFRSLQDKTQVIPLS--KTDFVHTRLTHSLEVSVVGRSLGRMVGKKLLEKYPHLEQVYGYKFNDFGA 107 (444)
T ss_dssp HHHHHHHHHHHSHHHHHGGGCBCSCC-----CCCCCBHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHTTCCCHHHHHH
T ss_pred cHHHHHHHHhCCHHHhhhccCCccCCCC--CCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccchhhHHH
Confidence 3456789999999999999999999864 69999999999999999999999987642 110 11345555 47
Q ss_pred HHHHHHHhhhcCCCCCCchhhhhhhhhccCCC-----------------CccHHHHHHHHHHHHH--HhCCCCCChhhhh
Q 030373 113 TVKLAGLLHDVGHGPFSHLFEREFLPRVVSGC-----------------KWSHEQMSLKMVDHIV--DEHHIDLDFEMIK 173 (178)
Q Consensus 113 ~v~iAALlHDiGh~PfsH~~E~~~~~~~~~~~-----------------~~~HE~~s~~ii~~il--~~~g~~~~~~~I~ 173 (178)
++++|||+|||||+||||++|.++...+...+ +|+|+.+|.+|+..+. ...|+|++.+.++
T Consensus 108 lv~~a~L~HDiGH~PFgH~gE~~l~~~~~~~gg~~~~~~l~~~~~~D~~~Fehnaqs~Ril~~l~~~~~~GLnLT~~tl~ 187 (444)
T 3bg2_A 108 IVAAAALAHDIGNPPFGHSGEKAIGEFFKNGYGKRYKDSLTAKEYQDLIKFEGNANGFKVLSQSKPGAQGGLRLSYATLG 187 (444)
T ss_dssp HHHHHHHHTTTTCCTTHHHHHHHHHHHHHTSGGGGGGGGSCHHHHHHHHTCCHHHHHHHHHHCCBTTBTTTTCCCHHHHH
T ss_pred HHHHHHHhcccCCCCccccHHHHHHHHHHhccccchhhccchhhhccccCCchHHHHHHHHHHHhhccCCCccCCHHHHH
Confidence 99999999999999999999998755443322 4999999999998876 4569999988877
Q ss_pred hc
Q 030373 174 KV 175 (178)
Q Consensus 174 ~I 175 (178)
-|
T Consensus 188 gi 189 (444)
T 3bg2_A 188 AF 189 (444)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 7
>2dqb_A Deoxyguanosinetriphosphate triphosphohydrolase, P; dntpase, DNTP, single-stranded DNA, DNA dGTPase, HD superfamily, structural genomics; 2.20A {Thermus thermophilus}
Probab=99.94 E-value=9.6e-28 Score=213.11 Aligned_cols=121 Identities=21% Similarity=0.368 Sum_probs=99.8
Q ss_pred ecChhHHHHhcCHHHHhHHhHhhhcccceecCCCC-ccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHH
Q 030373 41 YLDPLALKFIDTEQFQRLRDLKQLGVTHLVYPGAV-HSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGL 119 (178)
Q Consensus 41 ~~~~~~~~IIdt~~fqRLr~I~Qlg~~~~vyp~a~-htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAAL 119 (178)
.+.....+||+|+.||||++++|+. .++||+. ||||+|||||+++|+.++.. ++++ ..++++|||
T Consensus 41 ~FqrD~~rII~S~~FrRL~~ktQv~---~~~~~d~~~tRl~HSl~Va~iar~ia~~--------l~l~---~~l~~~a~L 106 (376)
T 2dqb_A 41 PYQKDRDRILHTTAFRRLEYKTQVL---PGWAGDYYRTRLTHTLEVAQVSRSIARA--------LGLN---EDLTEAIAL 106 (376)
T ss_dssp HHHHHHHHHHHSHHHHHGGGSCSSS---CSCC--CCCCHHHHHHHHHHHHHHHHHH--------TTCC---HHHHHHHHH
T ss_pred cHHHHHHHHHCCHHHHHHcCCCccc---cCCCCcccccHHHHHHHHHHHHHHHHHH--------cCCC---HHHHHHHHH
Confidence 4566789999999999999999993 4677775 99999999999999999987 4455 468999999
Q ss_pred hhhcCCCCCCchhhhhhhhhccCCCCccHHHHHHHHHHHHHHh----CCCCCChhhhhhc
Q 030373 120 LHDVGHGPFSHLFEREFLPRVVSGCKWSHEQMSLKMVDHIVDE----HHIDLDFEMIKKV 175 (178)
Q Consensus 120 lHDiGh~PfsH~~E~~~~~~~~~~~~~~HE~~s~~ii~~il~~----~g~~~~~~~I~~I 175 (178)
||||||+||||++|.++........+++|+.+|.+++..+.++ .|++++.+.++.|
T Consensus 107 lHDiGh~PFgH~~E~~l~~~~~~~ggf~Hn~~s~ril~~le~~~~~~~glnLt~~~l~~I 166 (376)
T 2dqb_A 107 SHDLGHPPFGHTGEHVLNALMQDHGGFEHNAQALRILTHLEVRYPGFRGLNLTYEVLEGI 166 (376)
T ss_dssp HTTTTCCSSTTHHHHHHHHHTTTTTCCCHHHHHHHHHHTTCBCBTTBSBCCCCHHHHHHH
T ss_pred HHhcCCCccccchHHHHHHHhhccCCCcHHHHHHHHHHHHhhccccccCCCCCHHHHHHH
Confidence 9999999999999998754433334799999999999987544 3788888888765
No 8
>3b57_A LIN1889 protein; Q92AN1, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 3.00A {Listeria innocua CLIP11262} SCOP: a.211.1.1
Probab=98.61 E-value=5.6e-08 Score=78.68 Aligned_cols=69 Identities=29% Similarity=0.366 Sum_probs=52.2
Q ss_pred ccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhhhhhhhhccCCCCccHHHHHHHHHH
Q 030373 78 RFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFEREFLPRVVSGCKWSHEQMSLKMVD 157 (178)
Q Consensus 78 Rf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E~~~~~~~~~~~~~~HE~~s~~ii~ 157 (178)
+++|++.|+.+|..|+... +. |..++.+||||||||..+.. +++..|..+++
T Consensus 26 ~~~H~~rV~~~a~~ia~~~--------~~---d~~~v~~AAlLHDig~~~~~-----------------~~~~~~a~~a~ 77 (209)
T 3b57_A 26 DWSHIKRVWKLSKEIQSKE--------GG---DLFTIELAALFHDYSDIKLT-----------------TDEQEATKTLI 77 (209)
T ss_dssp CHHHHHHHHHHHHHHHHHH--------CS---CHHHHHHHHHHTTCCC------------------------CHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHc--------CC---CHHHHHHHHHHhccCcccCC-----------------CchHHHHHHHH
Confidence 4999999999999998752 22 47899999999999987531 12336889999
Q ss_pred HHHHhCCCCCChhhhhhcc
Q 030373 158 HIVDEHHIDLDFEMIKKVK 176 (178)
Q Consensus 158 ~il~~~g~~~~~~~I~~I~ 176 (178)
.+|++.|++ ++.++.|+
T Consensus 78 ~~L~~~g~~--~~~~~~V~ 94 (209)
T 3b57_A 78 NWMETKEIP--SELIKKII 94 (209)
T ss_dssp HHHHHTTCC--HHHHHHHH
T ss_pred HHHHHCCCC--HHHHHHHH
Confidence 999999987 77777764
No 9
>2pq7_A Predicted HD superfamily hydrolase; 104161995, HD domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.45A {Uncultured thermotogales bacterium} SCOP: a.211.1.1
Probab=98.56 E-value=5.1e-08 Score=79.09 Aligned_cols=76 Identities=18% Similarity=0.258 Sum_probs=58.7
Q ss_pred CccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhhhhhhhhccCCCCccHHHHHHH
Q 030373 75 VHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFEREFLPRVVSGCKWSHEQMSLK 154 (178)
Q Consensus 75 ~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E~~~~~~~~~~~~~~HE~~s~~ 154 (178)
...++.||+.|+.+|..++... +. +...+.+||||||||. |+++ ..+..|+..|..
T Consensus 31 ~~h~~~H~~rV~~~a~~la~~~--------~~---d~~~l~~AaLLHDIg~-~~~~------------~~~~~H~~~ga~ 86 (220)
T 2pq7_A 31 PAHDISHTFRVMENASEIASRE--------KC---DLQKAIIAALLHDIKR-PHEA------------LTGVDHAESGAE 86 (220)
T ss_dssp TTTSHHHHHHHHHHHHHHHHHH--------TC---CHHHHHHHHHHTTTTH-HHHH------------HHCCCHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHc--------CC---CHHHHHHHHHHHcCCC-cccC------------CCcCCHHHHHHH
Confidence 3456999999999999999763 22 4678999999999973 3211 114689999999
Q ss_pred HHHHHHHhCCCCCChhhhhhcc
Q 030373 155 MVDHIVDEHHIDLDFEMIKKVK 176 (178)
Q Consensus 155 ii~~il~~~g~~~~~~~I~~I~ 176 (178)
+++.+|++.|++ .+.++.|+
T Consensus 87 ~a~~~L~~~~~~--~~~i~~v~ 106 (220)
T 2pq7_A 87 YASGLLPTMGFD--ISFVAEVS 106 (220)
T ss_dssp HHHHHGGGGTCC--HHHHHHHH
T ss_pred HHHHHHHHCCCC--HHHHHHHH
Confidence 999999999987 76666653
No 10
>3dto_A BH2835 protein; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Bacillus halodurans} SCOP: a.211.1.1
Probab=98.51 E-value=2.3e-07 Score=76.61 Aligned_cols=70 Identities=17% Similarity=0.217 Sum_probs=53.7
Q ss_pred ccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhhhhhhhhccCCCCccHHHHHHHH
Q 030373 76 HSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFEREFLPRVVSGCKWSHEQMSLKM 155 (178)
Q Consensus 76 htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E~~~~~~~~~~~~~~HE~~s~~i 155 (178)
|+ +.|++.|+.+|..++.. .+. |..++.+||||||||... + .+|+..|..+
T Consensus 25 H~-~~H~~rV~~~a~~ia~~--------~~~---d~~~l~~AalLHDig~~k--------~---------~~~~~~ga~~ 75 (223)
T 3dto_A 25 HD-WYHIRRVTLMAKAIGEQ--------EKV---DVFVVQIAALFHDLIDDK--------L---------VDDPETAKQQ 75 (223)
T ss_dssp -C-HHHHHHHHHHHHHHHHH--------TTC---CHHHHHHHHHHHSTTC------------------------CHHHHH
T ss_pred Cc-HHHHHHHHHHHHHHHHH--------cCC---CHHHHHHHHHHhhccccc--------c---------CCCHHHHHHH
Confidence 55 99999999999999875 223 478999999999999642 1 2467889999
Q ss_pred HHHHHHhCCCCCChhhhhhcc
Q 030373 156 VDHIVDEHHIDLDFEMIKKVK 176 (178)
Q Consensus 156 i~~il~~~g~~~~~~~I~~I~ 176 (178)
++.+|.+.|++ ++.++.|+
T Consensus 76 a~~~L~~~g~~--~~~i~~V~ 94 (223)
T 3dto_A 76 LIDWMEAAGVP--SQKIDHTM 94 (223)
T ss_dssp HHHHHHTTTCC--HHHHHHHH
T ss_pred HHHHHHHcCCC--HHHHHHHH
Confidence 99999999987 88888775
No 11
>3gw7_A Uncharacterized protein YEDJ; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Escherichia coli k-12}
Probab=98.42 E-value=1.7e-07 Score=78.19 Aligned_cols=75 Identities=17% Similarity=0.137 Sum_probs=55.8
Q ss_pred ccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhhhhhhhhccCCCCccHHHHHHHH
Q 030373 76 HSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFEREFLPRVVSGCKWSHEQMSLKM 155 (178)
Q Consensus 76 htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E~~~~~~~~~~~~~~HE~~s~~i 155 (178)
|+ +.|++.|+.+|..++.. .+ .|..++.+||||||||..|-.| .....|+..|+++
T Consensus 25 H~-~~H~~rV~~~a~~ia~~--------~~---~d~~~~~~AalLHDig~~~~~~------------~~~~~H~~~ga~~ 80 (239)
T 3gw7_A 25 HD-VCHFRRVWATAQKLAAD--------DD---VDMLVILTACYFHDIVSLAKNH------------PQRQRSSILAAEE 80 (239)
T ss_dssp ---CCHHHHHHHHHHHHTTT--------SC---SCTTHHHHHHHHTTTTC--------------------CCSSHHHHHH
T ss_pred cc-HHHHHHHHHHHHHHHHH--------cC---CCHHHHHHHHHHhhcccccccC------------CccccHHHHHHHH
Confidence 55 99999999999999753 22 3467999999999999865211 1135799999999
Q ss_pred HHHHHHh--CCCCCChhhhhhcc
Q 030373 156 VDHIVDE--HHIDLDFEMIKKVK 176 (178)
Q Consensus 156 i~~il~~--~g~~~~~~~I~~I~ 176 (178)
++.+|.+ .|++ +++++.|+
T Consensus 81 A~~~L~~~~~g~~--~e~i~~V~ 101 (239)
T 3gw7_A 81 TRRLLREEFEQFP--AEKIEAVC 101 (239)
T ss_dssp HHHHHHHHTTSSC--TTTTTSTT
T ss_pred HHHHHHhccCCcC--HHHHHHHH
Confidence 9999999 8987 77787775
No 12
>2pjq_A Uncharacterized protein LP_2664; LPR71, NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactobacillus plantarum WCFS1} SCOP: a.211.1.1
Probab=98.40 E-value=5.6e-07 Score=74.07 Aligned_cols=69 Identities=14% Similarity=0.110 Sum_probs=51.1
Q ss_pred ccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhhhhhhhhccCCCCccHHHHHHHHHH
Q 030373 78 RFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFEREFLPRVVSGCKWSHEQMSLKMVD 157 (178)
Q Consensus 78 Rf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E~~~~~~~~~~~~~~HE~~s~~ii~ 157 (178)
+++|++.|+.+|..|+... +. |..++.+||||||||... + .+|+..|..+++
T Consensus 31 ~~~H~~rV~~~a~~ia~~~--------~~---d~~ll~lAAlLHDigk~k--------~---------~~~~~~ga~~a~ 82 (231)
T 2pjq_A 31 GRDHLQRVNRLARRLAKDE--------GA---NLNLTLAAAWLHDVIDDK--------L---------MANPAKAHQDLI 82 (231)
T ss_dssp SHHHHHHHHHHHHHHHHHH--------TC---CHHHHHHHHHHHHHHC--------------------------CHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHc--------CC---CHHHHHHHHHHHcCCccc--------C---------CChHHHHHHHHH
Confidence 4999999999999998752 22 478999999999999731 1 135668999999
Q ss_pred HHHHhCCCCCChhhhhhcc
Q 030373 158 HIVDEHHIDLDFEMIKKVK 176 (178)
Q Consensus 158 ~il~~~g~~~~~~~I~~I~ 176 (178)
.+|.+.|++ ++.++.|+
T Consensus 83 ~~L~~~g~~--~~~~~~V~ 99 (231)
T 2pjq_A 83 VQLNAQNVT--ADDQTAIF 99 (231)
T ss_dssp HHHHTTTCC--HHHHHHHH
T ss_pred HHHHHCCCC--HHHHHHHH
Confidence 999998877 77777764
No 13
>3djb_A Hydrolase, HD family; all alpha-helical protein., structural genomics, PSI-2, protein structure initiative; 2.90A {Bacillus thuringiensis serovarkonkukian} SCOP: a.211.1.1
Probab=98.40 E-value=2.3e-07 Score=76.58 Aligned_cols=70 Identities=27% Similarity=0.308 Sum_probs=56.4
Q ss_pred ccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhhhhhhhhccCCCCccHHHHHHHH
Q 030373 76 HSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFEREFLPRVVSGCKWSHEQMSLKM 155 (178)
Q Consensus 76 htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E~~~~~~~~~~~~~~HE~~s~~i 155 (178)
|+ +.|++.|+.+|..++.. .+ .|..++.+||||||||...+ .+|+..|..+
T Consensus 25 H~-~~H~~rV~~~a~~ia~~--------~~---~d~~~l~~AAlLHDig~~k~-----------------~~h~~~ga~~ 75 (223)
T 3djb_A 25 HD-WYHIRRVHKMAISLSEQ--------EG---GNRFIIEMAALLHDVADEKL-----------------NESEEAGMKK 75 (223)
T ss_dssp TT-HHHHHHHHHHHHHHHTT--------TC---SCHHHHHHHHTTHHHHC--C-----------------CSSSTTTHHH
T ss_pred Cc-HHHHHHHHHHHHHHHHH--------cC---CCHHHHHHHHHHhhcccccc-----------------CCcHHHHHHH
Confidence 55 99999999999999854 22 24789999999999997421 2478889999
Q ss_pred HHHHHHhCCCCCChhhhhhcc
Q 030373 156 VDHIVDEHHIDLDFEMIKKVK 176 (178)
Q Consensus 156 i~~il~~~g~~~~~~~I~~I~ 176 (178)
++.+|.+.|++ ++.++.|+
T Consensus 76 a~~~L~~~g~~--~~~i~~V~ 94 (223)
T 3djb_A 76 VSDWLEELHVE--EEESKHVL 94 (223)
T ss_dssp HHHHHHHTCCC--HHHHHHHH
T ss_pred HHHHHHHCCCC--HHHHHHHH
Confidence 99999999987 88888775
No 14
>2qgs_A Protein Se1688; alpha-helical protein, structural genomics, PSI-2, protein S initiative, northeast structural genomics consortium; 2.00A {Staphylococcus epidermidis} SCOP: a.211.1.1
Probab=98.33 E-value=8e-07 Score=72.75 Aligned_cols=68 Identities=19% Similarity=0.228 Sum_probs=53.8
Q ss_pred ccchHHHHHHHHHHH-HHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhhhhhhhhccCCCCccHHHHHHHHH
Q 030373 78 RFEHSLGVYWLAGAA-IQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFEREFLPRVVSGCKWSHEQMSLKMV 156 (178)
Q Consensus 78 Rf~HSLGV~~la~~i-~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E~~~~~~~~~~~~~~HE~~s~~ii 156 (178)
+++|++.|+..|..| +.. .+. |..++.+||||||||...+ . ++..|..++
T Consensus 26 ~~~H~~rV~~~a~~i~a~~--------~~~---d~~~l~lAAlLHDigk~~~----------------~--~~~~ga~~a 76 (225)
T 2qgs_A 26 DIAHVERVYNNACYIAKRE--------NIT---DTLVIELSSLLHDTVDSKL----------------T--DEILAYDQL 76 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHT--------TCS---CCHHHHHHHHHTTTTCCSS----------------S--CHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhc--------cCC---CHHHHHHHHHHHcCCCCCC----------------C--cHHHHHHHH
Confidence 699999999999999 753 222 3678999999999997421 1 456799999
Q ss_pred HHHHHhCCCCCChhhhhhcc
Q 030373 157 DHIVDEHHIDLDFEMIKKVK 176 (178)
Q Consensus 157 ~~il~~~g~~~~~~~I~~I~ 176 (178)
..+|++.|++ .+.++.|+
T Consensus 77 ~~~L~~~g~~--~~~i~~V~ 94 (225)
T 2qgs_A 77 KQFLSTLDLS--SEISQQVL 94 (225)
T ss_dssp HHHHHTTTCC--HHHHHHHH
T ss_pred HHHHHHCCCC--HHHHHHHH
Confidence 9999999876 77777764
No 15
>3ccg_A HD superfamily hydrolase; NP_347894.1, HD domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.50A {Clostridium acetobutylicum atcc 824}
Probab=98.23 E-value=3.3e-06 Score=67.04 Aligned_cols=40 Identities=33% Similarity=0.447 Sum_probs=33.3
Q ss_pred cccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCC
Q 030373 77 SRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGP 127 (178)
Q Consensus 77 tRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~P 127 (178)
.|+.||++|+.+|..+++.+ ++++ +.+.+||||||||...
T Consensus 19 ~~~~Hs~~Va~~A~~lA~~~--------g~d~---~~~~~AgLLHDiGk~~ 58 (190)
T 3ccg_A 19 KRYKHSLGVMDTAVRLAGIY--------NEDT---EKARIAGLVHDCAKKL 58 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--------TCCH---HHHHHHHHHTTTTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHH--------CcCH---HHHHHHHHHHHhcCCC
Confidence 47999999999999999874 4553 3589999999999963
No 16
>2o08_A BH1327 protein; putative HD superfamily hydrolase, structural genomics, JOIN for structural genomics, JCSG; HET: UNL PG4 DGI; 1.90A {Bacillus halodurans}
Probab=98.21 E-value=2.8e-06 Score=67.35 Aligned_cols=72 Identities=22% Similarity=0.193 Sum_probs=47.5
Q ss_pred cccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhhhhhh---------hhccCCCCcc
Q 030373 77 SRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFEREFL---------PRVVSGCKWS 147 (178)
Q Consensus 77 tRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E~~~~---------~~~~~~~~~~ 147 (178)
.|+.||++|+.+|..+++.+ ++++ +.+.+||||||||..-. -+.+.. ..........
T Consensus 18 ~~~~Hs~~Va~~A~~lA~~~--------g~~~---~~~~~agLLHDIGk~~~---~~~il~~~~~~~~~l~~~e~~~~~~ 83 (188)
T 2o08_A 18 HRYQHTIGVMETAIDLAKLY--------GADQ---QKAELAAIFHDYAKFRD---KNEMRTLIREKLSQQDILFYGDELL 83 (188)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--------TCCH---HHHHHHHHHTTTTTTSC---HHHHHHHHHHHCSCCGGGGSCGGGS
T ss_pred HHHHHHHHHHHHHHHHHHHH--------CcCH---HHHHHHHHHHHHcCCCC---HHHHHHHHHhcCCCCCHHHHHHHhh
Confidence 57999999999999999874 4553 35899999999999621 121110 0000122457
Q ss_pred HHHHHHHHHHHHHHhCCC
Q 030373 148 HEQMSLKMVDHIVDEHHI 165 (178)
Q Consensus 148 HE~~s~~ii~~il~~~g~ 165 (178)
|-..|..+++.. +++
T Consensus 84 H~~~G~~il~~~---~~~ 98 (188)
T 2o08_A 84 HAPCGAYYVREE---VGI 98 (188)
T ss_dssp HHHHHHHHHHHH---HCC
T ss_pred HHHHHHHHHHHc---cCC
Confidence 888888876552 465
No 17
>2ogi_A Hypothetical protein SAG1661; structural genomics, joint center for structural genomics, J protein structure initiative; HET: GDP MES; 1.85A {Streptococcus agalactiae serogroup V}
Probab=98.01 E-value=3.8e-06 Score=67.14 Aligned_cols=39 Identities=38% Similarity=0.544 Sum_probs=33.1
Q ss_pred cccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCC
Q 030373 77 SRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHG 126 (178)
Q Consensus 77 tRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~ 126 (178)
.|+.||++|+.+|..+++.+ ++++ +.+.+||||||||+.
T Consensus 26 ~~~~Hs~~Va~~A~~lA~~~--------g~d~---~~~~~AgLLHDIGK~ 64 (196)
T 2ogi_A 26 KRFNHVLGVERAAIELAERY--------GYDK---EKAGLAALLHDYAKE 64 (196)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--------TCCH---HHHHHHHHHTTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHH--------CcCH---HHHHHHHHHHHcCCc
Confidence 57999999999999999874 4543 458999999999996
No 18
>1zkl_A HCP1, TM22, high-affinity CAMP-specific 3',5'-cyclic phosphodiesterase 7A; PDE, hydrolase; HET: IBM; 1.67A {Homo sapiens} PDB: 3g3n_A*
Probab=97.77 E-value=0.00012 Score=64.12 Aligned_cols=95 Identities=16% Similarity=0.111 Sum_probs=62.0
Q ss_pred CCCccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhhhhhhhh--ccCCCCccHHH
Q 030373 73 GAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFEREFLPR--VVSGCKWSHEQ 150 (178)
Q Consensus 73 ~a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E~~~~~~--~~~~~~~~HE~ 150 (178)
..-|| +.|+..|++.+..++....- ...+++.|..++.+|||+||+||+-..-.+.-.-... ..-+...-.|.
T Consensus 80 npYHN-~~HA~dV~q~~~~ll~~~~l----~~~l~~le~~alliAAl~HDv~HpG~nN~fli~~~s~LA~lYnd~SvLEn 154 (353)
T 1zkl_A 80 NPYHN-AVHAADVTQAMHCYLKEPKL----ANSVTPWDILLSLIAAATHDLDHPGVNQPFLIKTNHYLATLYKNTSVLEN 154 (353)
T ss_dssp SSSSS-HHHHHHHHHHHHHHHTSHHH----HTTCCHHHHHHHHHHHHHTTTTCCSSCHHHHHHTTCHHHHHTTTSSHHHH
T ss_pred CCCcC-HHHHHHHHHHHHHHHhhhHH----hhhCCHHHHHHHHHHHHHhccCCCCCCcHHHHhcCCHHHHHcCCCCHHHH
Confidence 45688 99999999999988753221 1357889999999999999999975544433110000 00122345777
Q ss_pred HHHHHHHHHHHhCCC--CCChhhh
Q 030373 151 MSLKMVDHIVDEHHI--DLDFEMI 172 (178)
Q Consensus 151 ~s~~ii~~il~~~g~--~~~~~~I 172 (178)
..+..+-.||.++++ ++++++.
T Consensus 155 hH~a~a~~iL~~~ni~~~l~~~~~ 178 (353)
T 1zkl_A 155 HHWRSAVGLLRESGLFSHLPLESR 178 (353)
T ss_dssp HHHHHHHHHHHHHTTTTTSCHHHH
T ss_pred HHHHHHHHHHHhcCccccCCHHHH
Confidence 777777777777665 2445443
No 19
>1tbf_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5A, hydrolase; HET: VIA; 1.30A {Homo sapiens} SCOP: a.211.1.2 PDB: 1t9s_A* 1xoz_A* 1xp0_A* 2chm_A* 3tge_A* 3tgg_A* 3hc8_A* 3hdz_A* 1t9r_A* 3sie_A* 3shy_A* 3shz_A* 3b2r_A* 2h44_A* 2h42_A* 2h40_A* 1rkp_A* 1udt_A* 1udu_A* 1uho_A* ...
Probab=97.62 E-value=0.00031 Score=61.40 Aligned_cols=89 Identities=17% Similarity=0.160 Sum_probs=60.3
Q ss_pred CCCccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhhhhhhhh--ccCCCCccHHH
Q 030373 73 GAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFEREFLPR--VVSGCKWSHEQ 150 (178)
Q Consensus 73 ~a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E~~~~~~--~~~~~~~~HE~ 150 (178)
..-|| +.|+..|++.+..++... +....+++.|..++.+|||+||+||+-..-.+.-.-... ..-+...-.|.
T Consensus 98 npYHN-~~HA~dV~q~~~~ll~~~----~l~~~l~~le~~alliAAl~HDv~HpG~~N~fli~~~s~LA~lYnd~SvLEn 172 (347)
T 1tbf_A 98 VAYHN-WRHAFNTAQCMFAALKAG----KIQNKLTDLEILALLIAALSHDLDHPGVSNQFLINTNSELALMYNDESVLEH 172 (347)
T ss_dssp SSSSS-HHHHHHHHHHHHHHHHTT----CCGGGSCHHHHHHHHHHHHHTTTTCCSSCHHHHHHTTCHHHHHTTTSSHHHH
T ss_pred CCCcC-HHHHHHHHHHHHHHHHcc----cccccCCHHHHHHHHHHHHHccCCCCCCCCchHHhcCCHHHHHcCCCcHHHH
Confidence 45689 999999999999887541 111247888999999999999999976554433110000 01122456788
Q ss_pred HHHHHHHHHHHhCCCC
Q 030373 151 MSLKMVDHIVDEHHID 166 (178)
Q Consensus 151 ~s~~ii~~il~~~g~~ 166 (178)
..+.++-.+|.+.+.+
T Consensus 173 hH~a~a~~iL~~~~~n 188 (347)
T 1tbf_A 173 HHFDQCLMILNSPGNQ 188 (347)
T ss_dssp HHHHHHHHHHHSTTCC
T ss_pred HHHHHHHHHHcCcccc
Confidence 8888877888765543
No 20
>3tm8_A BD1817, uncharacterized protein; HD-GYP, phosphodiesterase, unknown function, hydrolase,signa protein; 1.28A {Bdellovibrio bacteriovorus} PDB: 3tmb_A 3tmc_A 3tmd_A
Probab=97.60 E-value=4.3e-05 Score=65.66 Aligned_cols=43 Identities=37% Similarity=0.438 Sum_probs=37.6
Q ss_pred ccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHH-HHHHHHhhhcCCC
Q 030373 76 HSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQT-VKLAGLLHDVGHG 126 (178)
Q Consensus 76 htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~-v~iAALlHDiGh~ 126 (178)
...+.||+.|+.+|..+++. +++++.+... +.+||||||||..
T Consensus 165 ~~~~~Hs~~Va~la~~la~~--------lgl~~~~~~~~l~~aaLLHDIGk~ 208 (328)
T 3tm8_A 165 KTISHHGVTVSTLSIALAQK--------LGITDPKKTQLLTLGALLHDYGHH 208 (328)
T ss_dssp CCHHHHHHHHHHHHHHHHHH--------HTCCCHHHHHHHHHHHHHTTGGGT
T ss_pred chHHHHHHHHHHHHHHHHHH--------cCcCHHHHHHHHHHHHHHhcCCcc
Confidence 44599999999999999988 4677788888 9999999999975
No 21
>1f0j_A PDE4B, phosphodiesterase 4B; PDE phosphodiesterase, hydrolase; 1.77A {Homo sapiens} SCOP: a.211.1.2 PDB: 1ro6_A* 1ro9_A* 1ror_A* 3hmv_A* 1tb5_A* 1xm6_A* 1xlx_A* 1xm4_A* 1xlz_A* 1xmu_A* 1xmy_A* 1xn0_A* 1xos_A* 1xot_B* 1y2h_A* 1y2j_A* 3kkt_A* 3g4i_A* 3g4k_A* 3g4l_A* ...
Probab=97.56 E-value=0.00022 Score=63.14 Aligned_cols=89 Identities=20% Similarity=0.187 Sum_probs=60.4
Q ss_pred CCCccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhhhhhhhh--ccCCCCccHHH
Q 030373 73 GAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFEREFLPR--VVSGCKWSHEQ 150 (178)
Q Consensus 73 ~a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E~~~~~~--~~~~~~~~HE~ 150 (178)
..-|| +.|+..|++.+..++... +....+++.+..++.+|||+||+||+-..-.+.-.-... ..-+...-.|.
T Consensus 80 npYHN-~~HA~dV~q~~~~ll~~~----~l~~~l~~le~~alliAAl~HDvdHpG~nN~fli~t~s~LA~lYnd~SvLEn 154 (377)
T 1f0j_A 80 VAYHN-SLHAADVAQSTHVLLSTP----ALDAVFTDLEILAAIFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLEN 154 (377)
T ss_dssp SSSSS-HHHHHHHHHHHHHHHTCG----GGTTTSCHHHHHHHHHHHHHTTTTCCSSCHHHHHHTTCHHHHHTTTSSHHHH
T ss_pred CCccC-HHHHHHHHHHHHHHHhcc----hhhhhCCHHHHHHHHHHHHHcCCCCCCCCCHHHHhcCCHHHHHcCCCCHHHH
Confidence 35689 999999999998887531 112357888999999999999999976644443210000 01122456788
Q ss_pred HHHHHHHHHHHhCCCC
Q 030373 151 MSLKMVDHIVDEHHID 166 (178)
Q Consensus 151 ~s~~ii~~il~~~g~~ 166 (178)
..+.++-.||.+.+.+
T Consensus 155 hH~a~a~~lL~~~~~n 170 (377)
T 1f0j_A 155 HHLAVGFKLLQEEHCD 170 (377)
T ss_dssp HHHHHHHHGGGSTTCC
T ss_pred HHHHHHHHHHcccccc
Confidence 8888888888776654
No 22
>1taz_A Calcium/calmodulin-dependent 3',5'-cyclic nucleot phosphodiesterase 1B; PDE1B, hydrolase; HET: CME; 1.77A {Homo sapiens} SCOP: a.211.1.2
Probab=97.51 E-value=0.00026 Score=62.40 Aligned_cols=89 Identities=12% Similarity=0.152 Sum_probs=59.8
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhhhhhhhh--ccCCCCccHH
Q 030373 72 PGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFEREFLPR--VVSGCKWSHE 149 (178)
Q Consensus 72 p~a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E~~~~~~--~~~~~~~~HE 149 (178)
+..-|| +.|+..|++.+..++....- ...+++.+..++.+|||+||+||+-..-.+.-.-... ..-+...-.|
T Consensus 78 ~npYHN-~~HA~dV~q~~~~ll~~~~l----~~~l~~le~~alliAAl~HDv~HpG~nN~fli~t~s~LA~lYnd~SvLE 152 (365)
T 1taz_A 78 KNPYHN-QIHAADVTQTVHCFLLRTGM----VHCLSEIELLAIIFAAAIHDYEHTGTTNSFHIQTKSECAIVYNDRSVLE 152 (365)
T ss_dssp CCSSSS-HHHHHHHHHHHHHHHHHHSG----GGGSCHHHHHHHHHHHHHTTTTCCSSCHHHHHHHTCHHHHHHTTSSHHH
T ss_pred CCCCcC-HHHHHHHHHHHHHHHHhhhH----HhhCCHHHHHHHHHHHHHhcCCCCCCccHHHHhcCChHHHHcCCCcHHH
Confidence 456799 99999999999998765321 1347888999999999999999976544443110000 0012245677
Q ss_pred HHHHHHHHHHHHhCCC
Q 030373 150 QMSLKMVDHIVDEHHI 165 (178)
Q Consensus 150 ~~s~~ii~~il~~~g~ 165 (178)
...+.++-.+|.+.+.
T Consensus 153 nhH~a~a~~iL~~~~~ 168 (365)
T 1taz_A 153 NHHISSVFRLMQDDEM 168 (365)
T ss_dssp HHHHHHHHHHTTSGGG
T ss_pred HHHHHHHHHHHhCccc
Confidence 7777777777765443
No 23
>1y2k_A DPDE3, PDE43, CAMP-specific 3',5'-cyclic phosphodiesterase 4D; PDE4D, pyrazole, hydrolase; HET: 7DE; 1.36A {Homo sapiens} SCOP: a.211.1.2 PDB: 1xon_A* 1xoq_A* 1xom_A* 1xor_A* 1y2c_A* 1y2d_A* 1y2e_A* 1y2b_A* 3iak_A* 3k4s_A* 1tbb_A* 1tb7_A* 3sl5_A* 3sl4_A* 2fm5_A* 3sl3_A* 2fm0_A* 3sl6_A* 3sl8_A* 1oyn_A* ...
Probab=97.48 E-value=0.00038 Score=60.82 Aligned_cols=89 Identities=20% Similarity=0.172 Sum_probs=60.0
Q ss_pred CCCccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhhhhhhhh--ccCCCCccHHH
Q 030373 73 GAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFEREFLPR--VVSGCKWSHEQ 150 (178)
Q Consensus 73 ~a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E~~~~~~--~~~~~~~~HE~ 150 (178)
..-|| +.|+..|++.+..++..- +....+++.|..++.+|||+||+||+-..-.+.-.-... ..-+...-.|.
T Consensus 93 npYHN-~~HA~dV~q~~~~ll~~~----~l~~~l~~le~~alliAAl~HDv~HpG~nN~fli~t~s~LA~lYnd~SvLEn 167 (349)
T 1y2k_A 93 VAYHN-NIHAADVVQSTHVLLSTP----ALEAVFTDLEILAAIFASAIHDVDHPGVSNQFLINTNSELALMYNDSSVLEN 167 (349)
T ss_dssp CSSSS-HHHHHHHHHHHHHHHTCG----GGTTTSCHHHHHHHHHHHHHTTTTCCSSCHHHHHHTTCHHHHHHTTSSHHHH
T ss_pred CCccC-HHHHHHHHHHHHHHHhhh----hHHhhcCHHHHHHHHHHHHhccCCCCCCCcHHHHhcCCHHHHHcCCCCHHHH
Confidence 35689 999999999998887431 112357889999999999999999976544443110000 00122456777
Q ss_pred HHHHHHHHHHHhCCCC
Q 030373 151 MSLKMVDHIVDEHHID 166 (178)
Q Consensus 151 ~s~~ii~~il~~~g~~ 166 (178)
..+.++-.+|.+.+.+
T Consensus 168 hH~a~a~~lL~~~~~n 183 (349)
T 1y2k_A 168 HHLAVGFKLLQEENCD 183 (349)
T ss_dssp HHHHHHHHGGGSTTCC
T ss_pred HHHHHHHHHHcccccc
Confidence 7788777888776654
No 24
>2our_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphodiesterase 10A; PDE10, substrate specificity, hydrolase; HET: CMP; 1.45A {Homo sapiens} PDB: 2ous_A 2ouu_A* 3sn7_A* 3sni_A* 3snl_A* 4dff_A* 2wey_A* 2oun_A* 2oup_A 2ouq_A* 2ouv_A 2ouy_A* 4ael_A* 2y0j_A* 4ddl_A* 3uuo_A* 3ui7_A* 2o8h_A* 2ovv_A* 2ovy_A* ...
Probab=97.32 E-value=0.00088 Score=58.11 Aligned_cols=87 Identities=18% Similarity=0.203 Sum_probs=60.1
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhhhhhhhh--ccCCCCccHH
Q 030373 72 PGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFEREFLPR--VVSGCKWSHE 149 (178)
Q Consensus 72 p~a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E~~~~~~--~~~~~~~~HE 149 (178)
+..-|| +.|+..|++.+..++.... ..+++.|..++.+|||+||+||+-..-.+.-.-... ..-+. .-.|
T Consensus 76 ~npYHN-~~HA~dV~q~~~~ll~~~~------~~l~~le~~alliAAl~HDv~HpG~~N~fli~~~~~LA~lYnd-SvLE 147 (331)
T 2our_A 76 RVPYHN-WKHAVTVAHCMYAILQNNH------TLFTDLERKGLLIACLCHDLDHRGFSNSYLQKFDHPLAALYST-STME 147 (331)
T ss_dssp SCSSSS-HHHHHHHHHHHHHHHHTTG------GGSCHHHHHHHHHHHHHTTTTCCSCCHHHHHHTTCHHHHHSCS-SHHH
T ss_pred CCccch-HHHHHHHHHHHHHHHHhcc------ccCCHHHHHHHHHHHHHccCCCCCCCCcHHHhcCCHHHHhcCC-chhH
Confidence 345689 9999999999999886531 247888999999999999999975544433110000 00122 4578
Q ss_pred HHHHHHHHHHHHhCCCC
Q 030373 150 QMSLKMVDHIVDEHHID 166 (178)
Q Consensus 150 ~~s~~ii~~il~~~g~~ 166 (178)
...+..+-.+|.+.+.+
T Consensus 148 ~hH~a~a~~iL~~~~~n 164 (331)
T 2our_A 148 QHHFSQTVSILQLEGHN 164 (331)
T ss_dssp HHHHHHHHHHHTSTTCC
T ss_pred HHHHHHHHHHHhccccc
Confidence 88888888888765544
No 25
>2r8q_A Class I phosphodiesterase PDEB1; leishimaniasis, parasite inhibitor selectivity, CAMP phosphodiesterase, hydrolase; HET: IBM; 1.50A {Leishmania major}
Probab=97.26 E-value=0.0014 Score=57.55 Aligned_cols=90 Identities=16% Similarity=0.114 Sum_probs=60.2
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhhhhhhh---hccC--CCCc
Q 030373 72 PGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFEREFLP---RVVS--GCKW 146 (178)
Q Consensus 72 p~a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E~~~~~---~~~~--~~~~ 146 (178)
+..-|| +.|...|++.+..++... +....+++.|..++.+|||+||+||+-..-.+.-.-.. ...+ ++..
T Consensus 96 ~npYHN-~~HA~dV~q~~~~ll~~~----~l~~~l~~le~~alliAAl~HDv~HpG~nN~fli~~~s~LA~lYnd~~n~S 170 (359)
T 2r8q_A 96 RVPYHN-FYHVVDVCQTLHTYLYTG----KASELLTELECYVLLVTALVHDLDHMGVNNSFYLKTDSPLGILSSASGNNS 170 (359)
T ss_dssp SCSSSS-HHHHHHHHHHHHHHHHTS----CGGGGSCHHHHHHHHHHHHHTTTTCCSCCHHHHHHTTCHHHHHHHHHSCCC
T ss_pred CCcccc-HHHHHHHHHHHHHHHHcc----cchhcccHHHHHHHHHHHHHhcCCCCCCCchHhHhcCCHHHHHcCCCCCCC
Confidence 345689 999999999998887541 11134788899999999999999997655433311000 0000 1235
Q ss_pred cHHHHHHHHHHHHHHhCCCC
Q 030373 147 SHEQMSLKMVDHIVDEHHID 166 (178)
Q Consensus 147 ~HE~~s~~ii~~il~~~g~~ 166 (178)
-.|...+.++-.+|.+.+.+
T Consensus 171 vLE~hH~a~a~~iL~~~~~n 190 (359)
T 2r8q_A 171 VLEVHHCSLAIEILSDPAAD 190 (359)
T ss_dssp HHHHHHHHHHHHHHTSTTTC
T ss_pred hHHHHHHHHHHHHHhccCcc
Confidence 67888888888888765543
No 26
>3i7a_A Putative metal-dependent phosphohydrolase; YP_926882.1, STRU genomics, joint center for structural genomics, JCSG; 2.06A {Shewanella amazonensis SB2B}
Probab=97.24 E-value=0.00018 Score=60.04 Aligned_cols=47 Identities=26% Similarity=0.364 Sum_probs=36.0
Q ss_pred ccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCC
Q 030373 78 RFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPF 128 (178)
Q Consensus 78 Rf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~Pf 128 (178)
.+.||+.|+.+|..+++.+... .+.+..+.+.+.+|||+||||..+.
T Consensus 118 ~~~hs~~vA~~a~~la~~~~~~----~~~~~~~~~~~~laGLLHdiGkl~l 164 (281)
T 3i7a_A 118 VWRTSIDVTAAACSLLQIYNKK----HPGSGLNYDTLTLAGLVHNIGALPV 164 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH----STTCCCCHHHHHHHHHHTTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhc----cccCCCCHHHHHHHHHHHHCCHHHH
Confidence 6899999999999999886331 1223334677899999999998654
No 27
>3hc1_A Uncharacterized HDOD domain protein; HDOD domain protein with unknown function, STRU genomics, joint center for structural genomics; 1.90A {Geobacter sulfurreducens}
Probab=97.20 E-value=0.00015 Score=61.28 Aligned_cols=43 Identities=37% Similarity=0.496 Sum_probs=34.5
Q ss_pred cccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCC
Q 030373 77 SRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFS 129 (178)
Q Consensus 77 tRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~Pfs 129 (178)
..+.||+.|+.+|+.+++.+ +.+ +.+.+.+|||+||||.....
T Consensus 118 ~~~~hs~~va~~a~~la~~~--------~~~--~~~~~~~agllHDIGkl~l~ 160 (305)
T 3hc1_A 118 TLWAHSLGVARIAKLIAERT--------GFL--NPVNVYVAGLLHDVGEVFIN 160 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHT--------TCS--CHHHHHHHHHTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHc--------CCC--CHHHHHHHHHHHHhhHHHHH
Confidence 34799999999999999873 333 36778999999999986543
No 28
>3bjc_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5, erectIle dysfunction, inhibitor design, allosteric enzyme, alternative splicing, CGMP binding; HET: WAN; 2.00A {Homo sapiens} SCOP: a.211.1.2 PDB: 3mf0_A 3lfv_A 2xss_A 2k31_A*
Probab=97.12 E-value=0.0016 Score=62.30 Aligned_cols=87 Identities=16% Similarity=0.216 Sum_probs=59.2
Q ss_pred CCCccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhhhhhh---hhccCCCCccHH
Q 030373 73 GAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFEREFL---PRVVSGCKWSHE 149 (178)
Q Consensus 73 ~a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E~~~~---~~~~~~~~~~HE 149 (178)
..-|| +.|...|++.+..++... +....+++.|..++.+||||||+||+=+.-.|.-.-. .... ...-.|
T Consensus 613 ~pyHN-~~Ha~dV~q~~~~~l~~~----~~~~~~~~~e~~a~~~aa~~HD~~HpG~~N~f~~~~~~~la~~y--~~svlE 685 (878)
T 3bjc_A 613 VAYHN-WRHAFNTAQCMFAALKAG----KIQNKLTDLEILALLIAALSHDLDHRGVNNSYIQRSEHPLAQLY--CHSIME 685 (878)
T ss_dssp SSSSS-HHHHHHHHHHHHHHHHTT----CCGGGSCHHHHHHHHHHHHHTTTTCCCTTCCTGGGSSCTTHHHH--CTTHHH
T ss_pred CCCcc-HHHHHHHHHHHHHHHhcc----chhhcCCHHHHHHHHHHHHHccCCCCCCCCHHHHhcCCHHHHHc--CchHHH
Confidence 45689 999999999999887542 1112478889999999999999999766555442100 0001 134567
Q ss_pred HHHHHHHHHHHHhCCCC
Q 030373 150 QMSLKMVDHIVDEHHID 166 (178)
Q Consensus 150 ~~s~~ii~~il~~~g~~ 166 (178)
...+..+-.||.+.+.+
T Consensus 686 ~~h~~~~~~~l~~~~~~ 702 (878)
T 3bjc_A 686 HHHFDQCLMILNSPGNQ 702 (878)
T ss_dssp HHHHHHHHHHHTSTTCC
T ss_pred HHHHHHHHHHHhCccCc
Confidence 77777777788765543
No 29
>3sk9_A Putative uncharacterized protein TTHB187; crispr, CAS, HD domain, nuclease, hydrolase; 1.80A {Thermus thermophilus HB8} PDB: 3skd_A
Probab=97.11 E-value=0.0015 Score=55.08 Aligned_cols=86 Identities=19% Similarity=0.209 Sum_probs=56.6
Q ss_pred CccccchHHHHHHHHHHHHHH--------HHHccCccCCCCHHH-HHHHHHHHHhhhcCCCCCCchhhhhhhh---hc--
Q 030373 75 VHSRFEHSLGVYWLAGAAIQK--------LKQNQGLELGIDNFD-IQTVKLAGLLHDVGHGPFSHLFEREFLP---RV-- 140 (178)
Q Consensus 75 ~htRf~HSLGV~~la~~i~~~--------l~~~~~~~~~i~~~d-~~~v~iAALlHDiGh~PfsH~~E~~~~~---~~-- 140 (178)
-|.=..|+++|+.+|+.+.+. +.+. +++++++ .+.+..+|++||||.. +-.|...+.. .+
T Consensus 23 ~~~L~~HllDvAava~~L~~~~~~~~r~~la~~----~g~~~~~~~~~~~~~~~lHDiGK~--~~~fq~~~~~~~~~l~~ 96 (265)
T 3sk9_A 23 FHPLLAHMLDTAAVALAVLRMEPPRTRALYAED----WGLPEEGALAWAAALVGLHDLGKA--SPVFQAGWEEGKERVQR 96 (265)
T ss_dssp TSBHHHHHHHHHHHHHHHHHHSCHHHHHHHHHH----HTSCHHHHHHHHHHHHTTTTGGGC--SGGGCC-----------
T ss_pred cccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH----hCCCHHHHHHHHHHHHHHhhcccc--cHHHHHHHHHHHHHHhh
Confidence 477789999999999998654 2221 4555433 4677888889999985 3333332110 00
Q ss_pred ------cCCCCccHHHHHHHHHHHHHHhCCCC
Q 030373 141 ------VSGCKWSHEQMSLKMVDHIVDEHHID 166 (178)
Q Consensus 141 ------~~~~~~~HE~~s~~ii~~il~~~g~~ 166 (178)
....+.+|...|..++..+|.+.|++
T Consensus 97 ~g~~~~~~~~~~~Ha~aGa~ll~~~L~~~g~~ 128 (265)
T 3sk9_A 97 AGLPFGELLDWVAHGVFTELFLRRLLKEKGLP 128 (265)
T ss_dssp ----------CCCHHHHHHHHHHHHHHHTTCC
T ss_pred ccCCccccCCCCChHHHHHHHHHHHHHhCCCC
Confidence 11235789999999999999888865
No 30
>3v93_A Cyclic nucleotide specific phosphodiesterase; parasite, phosphodiesterases,, hydrolase; 2.00A {Trypanosoma cruzi} PDB: 3v94_A*
Probab=96.98 E-value=0.001 Score=58.12 Aligned_cols=58 Identities=22% Similarity=0.240 Sum_probs=45.0
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhh
Q 030373 72 PGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFE 133 (178)
Q Consensus 72 p~a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E 133 (178)
...-|| +.|...|++.+..++..... ....+++.|..++.+|||+||+||+-+.-.+.
T Consensus 95 ~npYHN-~~HA~dV~q~~~~ll~~~~~---~~~~l~~le~~alliAAl~HDvdHpG~nN~fl 152 (345)
T 3v93_A 95 PNPYHN-AIHAADVLQGTFSLVSAAKP---LMEHLTPLECKAAAFAALTHDVCHPGRTNAFL 152 (345)
T ss_dssp CCSSSS-HHHHHHHHHHHHHHHHHCHH---HHHHCCHHHHHHHHHHHHHTTTTCCSSCHHHH
T ss_pred CCCCcC-hHHHHHHHHHHHHHHHhchH---hhhcCCHHHHHHHHHHHHHhcCCCCCCCCHHH
Confidence 446799 99999999999998876320 00237888899999999999999987765554
No 31
>3itu_A CGMP-dependent 3',5'-cyclic phosphodiesterase; Zn-binding, all-alpha-helical, alternative splicing, hydrolase, membrane, polymorphism; HET: IBM; 1.58A {Homo sapiens} PDB: 3itm_A* 1z1l_A
Probab=96.97 E-value=0.0014 Score=57.39 Aligned_cols=57 Identities=16% Similarity=0.279 Sum_probs=44.9
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhh
Q 030373 72 PGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFE 133 (178)
Q Consensus 72 p~a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E 133 (178)
...-|| +.|...|++.+..++....- ...+++.+..++.+|||+||+||+-+.-.+.
T Consensus 78 ~npYHN-~~HA~dV~q~~~~ll~~~~l----~~~l~~le~~alliAal~HDv~HpG~nN~fl 134 (345)
T 3itu_A 78 DPPYHN-WMHAFSVSHFCYLLYKNLEL----TNYLEDIEIFALFISCMCHDLDHRGTNNSFQ 134 (345)
T ss_dssp CCSSSS-HHHHHHHHHHHHHHHHHHCG----GGTSCHHHHHHHHHHHHHTTTTCCSCCHHHH
T ss_pred CCCCcC-cHHHHHHHHHHHHHHhccch----hhhhhHHHHHHHHHHHHHhcCCCCCCCCHHH
Confidence 345689 89999999999888765321 1357888999999999999999987665554
No 32
>3ljx_A MMOQ response regulator; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Methylococcus capsulatus} PDB: 3ljv_A 3p3q_A
Probab=96.96 E-value=0.00076 Score=56.62 Aligned_cols=75 Identities=15% Similarity=0.195 Sum_probs=47.9
Q ss_pred ccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhhhhh---hhhcc---------CCCC
Q 030373 78 RFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFEREF---LPRVV---------SGCK 145 (178)
Q Consensus 78 Rf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E~~~---~~~~~---------~~~~ 145 (178)
-+.||+.|+.+|+.+++. .+.. +.+.+.+|||+||||...+...+...+ ..... .--+
T Consensus 109 ~~~hs~~~A~~a~~la~~--------~~~~--~~~~~~~agLLhdiGkl~l~~~~p~~~~~il~~~~~~~l~~~E~~~lg 178 (288)
T 3ljx_A 109 YWQKSLARAVALQSITAQ--------ASTV--APKEAFTLGLLADVGRLALATAWPEEYSECLRKADGEALIALERERFA 178 (288)
T ss_dssp HHHHHHHHHHHHHHHHHT--------SSSS--CHHHHHHHHHHTTHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHH--------CCCC--CHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHc
Confidence 368999999999999876 2332 366789999999999865433222111 00000 0014
Q ss_pred ccHHHHHHHHHHHHHHhCCCC
Q 030373 146 WSHEQMSLKMVDHIVDEHHID 166 (178)
Q Consensus 146 ~~HE~~s~~ii~~il~~~g~~ 166 (178)
.+|.+.|..+++ +.+++
T Consensus 179 ~~H~~vGa~ll~----~W~lp 195 (288)
T 3ljx_A 179 TDHDELTRMLLT----DWGFP 195 (288)
T ss_dssp SCHHHHHHHHHH----HTTCC
T ss_pred cCHHHHHHHHHH----HCCCC
Confidence 678888887764 45654
No 33
>3ecm_A High affinity CAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A...; phosphodiesterase 8A PDE8A inhibitor selectivity; 1.90A {Homo sapiens} SCOP: a.211.1.0 PDB: 3ecn_A*
Probab=96.94 E-value=0.0012 Score=57.28 Aligned_cols=56 Identities=23% Similarity=0.253 Sum_probs=43.5
Q ss_pred CCCccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhh
Q 030373 73 GAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFE 133 (178)
Q Consensus 73 ~a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E 133 (178)
..-|| +.|+..|++.+..++....-. ..+++.+..++.+|||+||+||+-+.-.+.
T Consensus 72 npYHN-~~Ha~dV~q~~~~~l~~~~l~----~~l~~~e~~all~Aal~HD~~HpG~nN~fl 127 (338)
T 3ecm_A 72 NPYHN-STHSADVLHATAYFLSKERIK----ETLDPIDEVAALIAATIHDVDHPGRTNSFL 127 (338)
T ss_dssp SSSSS-HHHHHHHHHHHHHHHTSHHHH----TTSCHHHHHHHHHHHHHTTTTCCSSCHHHH
T ss_pred CCCcC-cHHHHHHHHHHHHHHHhcchh----hhhhHHHHHHHHHHHHHhccCCCCccchHH
Confidence 45699 899999999988776532211 347888899999999999999987665554
No 34
>3g4g_A DPDE3, PDE43, CAMP-specific 3',5'-cyclic phosphodiesterase 4D; PDE4D, UCR2, alternative splicing, cytoplasm, cytoskeleton, hydrolase, membrane; HET: D71; 2.30A {Homo sapiens} PDB: 3g45_A*
Probab=96.66 E-value=0.0023 Score=57.40 Aligned_cols=55 Identities=25% Similarity=0.298 Sum_probs=43.1
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhh
Q 030373 74 AVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFE 133 (178)
Q Consensus 74 a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E 133 (178)
.-|| +.|...|++.+..++.. .+....+++.+..++.+||||||+||+-+.-.+.
T Consensus 160 pYHN-~~HA~dV~Q~~~~ll~~----~~l~~~ls~le~lalliAAl~HDvdHpG~nN~Fl 214 (421)
T 3g4g_A 160 AYHN-NIHAADVVQSTHVLLST----PALEAVFTDLEILAAIFASAIHDVDHPGVSNQFL 214 (421)
T ss_dssp SSSS-HHHHHHHHHHHHHHHTC----GGGTTTSCHHHHHHHHHHHHHTTTTCCSSCHHHH
T ss_pred CCcC-cHHHhHHHHHHHHHHhh----hhhhhhcchHHHHHHHHHHHHhcCCCCCCCCHHH
Confidence 5689 89999999999888643 1112357888999999999999999987665554
No 35
>3dyn_A High affinity CGMP-specific 3',5'-cyclic phosphod 9A; phophodiestrase, enzyme mechanism, hydrolase, manganes binding, phosphoprotein; HET: PCG IBM; 2.10A {Homo sapiens} SCOP: a.211.1.2 PDB: 3dyl_A* 3dy8_A* 3dyq_A* 3dys_A* 3jsi_A* 3jsw_A* 2yy2_A* 2hd1_A* 3k3e_A* 3k3h_A* 4gh6_A* 3n3z_A*
Probab=96.66 E-value=0.0017 Score=56.40 Aligned_cols=57 Identities=18% Similarity=0.284 Sum_probs=43.6
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhh
Q 030373 72 PGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFE 133 (178)
Q Consensus 72 p~a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E 133 (178)
...-|| +.|+..|++.+..++....- ...+++.|..++.+|||+||+||+-.+-.+.
T Consensus 71 ~npYHN-~~Ha~dV~q~~~~~l~~~~l----~~~l~~le~~alliAal~HDv~HpG~nN~fl 127 (329)
T 3dyn_A 71 NNPFHN-FRHCFCVAQMMYSMVWLCSL----QEKFSQTDILILMTAAICHDLDHPGYNNTYQ 127 (329)
T ss_dssp CCSSSS-HHHHHHHHHHHHHHHHHTTH----HHHSCHHHHHHHHHHHHHTTTTCCSSCHHHH
T ss_pred CCCCcC-cHHHhHHHHHHHHHHHhhhH----hhcCCHHHHHHHHHHHHHhcCCCCCCCCHHH
Confidence 345689 89999999999888754211 1236788899999999999999987665544
No 36
>3m5f_A Metal dependent phosphohydrolase; CAS3, prokaryotic immune system, HD-motif, structural genomics, PSI-2; 2.30A {Methanocaldococcus jannaschii} PDB: 3s4l_A
Probab=96.63 E-value=0.0083 Score=50.31 Aligned_cols=91 Identities=20% Similarity=0.242 Sum_probs=56.4
Q ss_pred eecCCCCccccchHHHHHHHHHHHHH----HHHHcc-CccCCCCHHH-HHHHHHHHHhhhcCCCCCCchhhhhhhhhccC
Q 030373 69 LVYPGAVHSRFEHSLGVYWLAGAAIQ----KLKQNQ-GLELGIDNFD-IQTVKLAGLLHDVGHGPFSHLFEREFLPRVVS 142 (178)
Q Consensus 69 ~vyp~a~htRf~HSLGV~~la~~i~~----~l~~~~-~~~~~i~~~d-~~~v~iAALlHDiGh~PfsH~~E~~~~~~~~~ 142 (178)
+.||+- |=.+|+.+|+.....+-+ .+.+.- .....++.++ ..++.+||++||+|.. +-.|+..+.....+
T Consensus 10 ~A~p~e--TL~EHt~dvL~~~e~Lk~~y~~sI~r~L~~~~i~Ld~e~~~~ll~~a~llHDiGKa--~~~FQ~k~l~~~~~ 85 (244)
T 3m5f_A 10 LAFKNQ--SLIDHVNDMVKYWERIKYRYLKTIKRALEALNIKLDIEKVDEFMKILIKLHDIGKA--SKIYQRAIINDQEK 85 (244)
T ss_dssp EEETTE--EHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCCCHHHHHHHHHHHHHHTTGGGG--BHHHHHHHHCTTSC
T ss_pred hhCCCC--CHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhccccCHHHHHHHHHHHHHHcccccC--CHHHHHHHHhccCC
Confidence 456644 668999999999986422 121110 0113455544 4678899999999985 33344422221111
Q ss_pred CCCccHHHHHHHHHHHHHHhC
Q 030373 143 GCKWSHEQMSLKMVDHIVDEH 163 (178)
Q Consensus 143 ~~~~~HE~~s~~ii~~il~~~ 163 (178)
.....||-.|..++..++.+.
T Consensus 86 ~~~~~He~lSa~fl~~~l~~~ 106 (244)
T 3m5f_A 86 LMGFRHELVSAYYTYHILLKK 106 (244)
T ss_dssp CSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHhhc
Confidence 135799999999998887643
No 37
>3qi3_A High affinity CGMP-specific 3',5'-cyclic phosphod 9A; mutation, glutamine switch, hydrolase-hydrolase inhibitor CO; HET: PDB; 2.30A {Homo sapiens} PDB: 3qi4_A*
Probab=96.59 E-value=0.0039 Score=57.52 Aligned_cols=57 Identities=19% Similarity=0.317 Sum_probs=44.5
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhh
Q 030373 72 PGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFE 133 (178)
Q Consensus 72 p~a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E 133 (178)
...-|| +.|+..|++.+..++.... ....+++.|..++.+|||+||+||+-+.-.|.
T Consensus 248 ~nPYHN-~~HA~DV~Q~~~~ll~~~~----l~~~ls~lE~lAlliAAl~HDvdHPG~nN~Fl 304 (533)
T 3qi3_A 248 NNPFHN-FRHCFCVAQMMYSMVWLCS----LQEKFSQTDILILMTAAICHDLDHPGYNNTYQ 304 (533)
T ss_dssp CCSSSS-HHHHHHHHHHHHHHHHHTT----GGGTSCHHHHHHHHHHHHHTTTTCCSSCHHHH
T ss_pred CCCCcC-hHHHhHHHHHHHHHHHhcc----chhhccHHHHHHHHHHHHHhccCCCCCCCHHH
Confidence 345689 8999999999988875421 12357888999999999999999987765554
No 38
>3ibj_A CGMP-dependent 3',5'-cyclic phosphodiesterase; PDE2A, GAF-domains, allosteric regulation hydrolase, membrane; 3.02A {Homo sapiens}
Probab=96.52 E-value=0.0045 Score=57.34 Aligned_cols=57 Identities=16% Similarity=0.279 Sum_probs=44.6
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhh
Q 030373 72 PGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFE 133 (178)
Q Consensus 72 p~a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E 133 (178)
+..-|| +.|...|++.+..++....- ...+++.+..++.+||||||+||+-++-.|.
T Consensus 439 ~~pyHN-~~Ha~dv~q~~~~~~~~~~~----~~~~~~~e~~a~~~aa~~HD~~H~G~~N~f~ 495 (691)
T 3ibj_A 439 DPPYHN-WMHAFSVSHFCYLLYKNLEL----TNYLEDIEIFALFISCMCHDLDHRGTNNSFQ 495 (691)
T ss_dssp CCSSSB-HHHHHHHHHHHHHHHHHHTG----GGTSCHHHHHHHHHHHHHTTTTCCCCCCSCS
T ss_pred CCCCcC-cHHHHHHHHHHHHHHhccch----hhhCCHHHHHHHHHHHHHccCCCCCCCcHHH
Confidence 345689 99999999999888764321 1357888999999999999999986655554
No 39
>3rf0_A Exopolyphosphatase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, hydrolase; HET: MSE; 1.80A {Yersinia pestis}
Probab=96.51 E-value=0.0037 Score=50.41 Aligned_cols=43 Identities=19% Similarity=0.048 Sum_probs=35.2
Q ss_pred cchHHHHHHHHHHHHHHHHHccCccCCCCHHHH--HHHHHHHHhhhcCC
Q 030373 79 FEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDI--QTVKLAGLLHDVGH 125 (178)
Q Consensus 79 f~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~--~~v~iAALlHDiGh 125 (178)
-+|+--|+.+|..+.+.+... .++++.+. .++..||+|||||-
T Consensus 21 ~~ha~~V~~~A~~Lf~~l~~~----~~l~~~~~~~~lL~~Aa~LHdIG~ 65 (209)
T 3rf0_A 21 REQARRVLETTEQLYTQWLAQ----NTKLVQPQLEALLKWAAMLHEVGL 65 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH----CGGGCCHHHHHHHHHHHHHTTGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHH----hCCChhHHHHHHHHHHHHHHHccc
Confidence 478889999999999987643 34455567 89999999999995
No 40
>3m1t_A Putative phosphohydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE GOL; 1.62A {Shewanella amazonensis} SCOP: a.211.1.0
Probab=96.45 E-value=0.0021 Score=53.50 Aligned_cols=40 Identities=18% Similarity=0.274 Sum_probs=32.6
Q ss_pred ccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCC
Q 030373 78 RFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPF 128 (178)
Q Consensus 78 Rf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~Pf 128 (178)
-+.||+.|+.+|+.+++.+ +++ .+.+.+|||+||||...+
T Consensus 106 ~~~hs~~~a~~a~~la~~~--------~~~---~~~~~~agLLhdiGkl~l 145 (275)
T 3m1t_A 106 FWGNTFEVAIICQELAKRL--------GTL---PEEAFTCGILHSIGELLI 145 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHH--------TSC---HHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh--------CCC---HHHHHHHHHHHHccHHHH
Confidence 4789999999999999874 233 456899999999998654
No 41
>3hr1_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphodiesterase 10A; PDE 10A, PDE10 inhibitors, allosteric enzyme, alternative splicing; HET: PF9; 1.53A {Rattus norvegicus} PDB: 3hqy_A* 3hqz_A* 3hqw_A*
Probab=96.45 E-value=0.0048 Score=54.68 Aligned_cols=54 Identities=22% Similarity=0.276 Sum_probs=43.8
Q ss_pred CCCccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCchhh
Q 030373 73 GAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSHLFE 133 (178)
Q Consensus 73 ~a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH~~E 133 (178)
..-|| +.|...|++.+..++... ...+++.+..++.+|||+||+||+-+.-.+.
T Consensus 108 npYHN-~~HA~dV~q~~~~ll~~~------~~~lt~le~~alliAAl~HDvdHpG~nN~Fl 161 (380)
T 3hr1_A 108 VPYHN-WKHAVTVAHCMYAILQNN------NGLFTDLERKGLLIACLCHDLDHRGFSNSYL 161 (380)
T ss_dssp CSSSS-HHHHHHHHHHHHHHHHTS------TTTSCHHHHHHHHHHHHHTTTTCCSCCHHHH
T ss_pred CCCcC-cHHHHHHHHHHHHHHHhc------cccCCHHHHHHHHHHHHHccCCCCCCCCHHH
Confidence 45688 999999999999887542 1357888999999999999999987665544
No 42
>1vqr_A Hypothetical protein CJ0248; HD-domain/pdease-like fold, structural genomics, joint cente structural genomics, JCSG; 2.25A {Campylobacter jejuni subsp} SCOP: a.211.1.3
Probab=96.39 E-value=0.0035 Score=52.43 Aligned_cols=43 Identities=12% Similarity=-0.014 Sum_probs=34.6
Q ss_pred ccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCCCCCc
Q 030373 78 RFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHGPFSH 130 (178)
Q Consensus 78 Rf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~PfsH 130 (178)
.+.||+.|+.+|..++..+ ...+.+.+.+||||||||...+..
T Consensus 125 ~~~hs~~va~~a~~la~~~----------~~~~~e~a~~aGLLHDIGkl~l~~ 167 (297)
T 1vqr_A 125 FLKTCNEEATFIANWLNDE----------DKKLSHLLVPCAMLLRLGIVIFSN 167 (297)
T ss_dssp HHHHHHHHHHHHHHHHTTT----------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc----------cCCCHHHHHHHHHHHHccHHHHHH
Confidence 5789999999999998542 245678899999999999876433
No 43
>3mem_A Putative signal transduction protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.25A {Marinobacter aquaeolei}
Probab=96.27 E-value=0.0031 Score=56.37 Aligned_cols=49 Identities=22% Similarity=0.250 Sum_probs=37.0
Q ss_pred ccccchHHHHHHHHHHHHHHHHHccCccCCCC-HHHHHHHHHHHHhhhcCCCCCCchh
Q 030373 76 HSRFEHSLGVYWLAGAAIQKLKQNQGLELGID-NFDIQTVKLAGLLHDVGHGPFSHLF 132 (178)
Q Consensus 76 htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~-~~d~~~v~iAALlHDiGh~PfsH~~ 132 (178)
...+.||+.|+.+|+.+++.+ +.+ ..+.+.+.+|||+||||...+.+.+
T Consensus 277 ~~~w~hs~~~A~~a~~LA~~~--------~~~~~~~~~~aflaGLLhDIGkl~l~~~~ 326 (457)
T 3mem_A 277 VDYWQQAIWQAQSAGILASMM--------PRGQRPLFGLAYLAGLLHNFGHLVLAQVF 326 (457)
T ss_dssp CCHHHHHHHHHHHHHHHHHHS--------CGGGCCCHHHHHHHHHHTTTHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHhc--------ccccCCCHHHHHHHHHHHHhhHHHHHHHC
Confidence 356899999999999999873 221 1246678999999999987654433
No 44
>3kq5_A Hypothetical cytosolic protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Coxiella burnetii}
Probab=96.27 E-value=0.0051 Score=54.78 Aligned_cols=49 Identities=20% Similarity=0.140 Sum_probs=35.8
Q ss_pred cCCCCccc----cchHHH-HHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCC
Q 030373 71 YPGAVHSR----FEHSLG-VYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHG 126 (178)
Q Consensus 71 yp~a~htR----f~HSLG-V~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~ 126 (178)
+|.+.+.. ++|+|. |+.+|.++++.. + ...+-|+.++.+||||||||+.
T Consensus 65 lPAa~~H~~GGLLeHtLerVa~~A~~l~~~Y----P---~~~~~Er~~l~~aALLHDIGKl 118 (393)
T 3kq5_A 65 LPIRLDEPLCSLMNEGLLRGVNSLNHYIQNH----P---EATPLERYALFSAGLLLEVAHA 118 (393)
T ss_dssp CCSSTTSCTTHHHHHHHHHHHHHHHHHHHHC----T---TCCHHHHHHHHHHHHHTTTTHH
T ss_pred CCCcccCCCCcHHHHHHHHHHHHHHHHHHhC----C---CCCchHHHHHHHHHHHhccchh
Confidence 46553323 789999 999999988762 1 1223457899999999999965
No 45
>1so2_A CGMP-inhibited 3',5'-cyclic phosphodiesterase B; PDE3B phosphodiesterase, hydrolase; HET: HG9 666; 2.40A {Homo sapiens} SCOP: a.211.1.2 PDB: 1soj_A*
Probab=95.36 E-value=0.014 Score=52.29 Aligned_cols=61 Identities=16% Similarity=0.153 Sum_probs=41.3
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHH-------H----------ccC-----------------------ccCCCCHHHH
Q 030373 72 PGAVHSRFEHSLGVYWLAGAAIQKLK-------Q----------NQG-----------------------LELGIDNFDI 111 (178)
Q Consensus 72 p~a~htRf~HSLGV~~la~~i~~~l~-------~----------~~~-----------------------~~~~i~~~d~ 111 (178)
+..-|| +.|...|++.+..++.... . ..+ ....+++-+.
T Consensus 80 ~nPYHN-~~HA~DV~Q~~~~lL~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~k~~~~~~~~~g~l~~~l~~lE~ 158 (420)
T 1so2_A 80 DIPYHN-RIHATDVLHAVWYLTTRPVPGLQQIHNGCGTGNETDSDGRINHGRIAYISSKSCSNPDESYGCLSSNIPALEL 158 (420)
T ss_dssp SCSSSS-HHHHHHHHHHHHHHTTSCEETCCCCCCC---------------CCCCCCCCTTCCCSSTTEECGGGTSCHHHH
T ss_pred CCCCcC-HHHHHHHHHHHHHHHhccccccccccccccccccccccccccccchhhhhcccccccccccchhhhccCHHHH
Confidence 345699 9999999999988753200 0 000 0012456788
Q ss_pred HHHHHHHHhhhcCCCCCCchhh
Q 030373 112 QTVKLAGLLHDVGHGPFSHLFE 133 (178)
Q Consensus 112 ~~v~iAALlHDiGh~PfsH~~E 133 (178)
.++.+|||+||+||+=+.-.|.
T Consensus 159 lAlliAAl~HDvdHpG~nN~Fl 180 (420)
T 1so2_A 159 MALYVAAAMHDYDHPGRTNAFL 180 (420)
T ss_dssp HHHHHHHHHTTTTCCSCCHHHH
T ss_pred HHHHHHHHHhcCCCCCCCCchh
Confidence 8999999999999976655554
No 46
>2paq_A 5'-deoxynucleotidase YFBR; HD domain phosphoh structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; 2.10A {Escherichia coli} SCOP: a.211.1.1 PDB: 2par_A* 2pau_A*
Probab=94.76 E-value=0.036 Score=44.61 Aligned_cols=62 Identities=21% Similarity=0.263 Sum_probs=39.3
Q ss_pred HHhHHhHhhhcccceecCCCCccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcC
Q 030373 55 FQRLRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVG 124 (178)
Q Consensus 55 fqRLr~I~Qlg~~~~vyp~a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiG 124 (178)
..||+.++--|. +......|=.+||..|+.+|..++.......+ .++ |...+..+||+||+|
T Consensus 12 ~~rLK~i~R~~~---~~~~~~EnVaeHS~~VA~lA~~la~~~~~~~~--~~v---D~~~~~~~aLlHDi~ 73 (201)
T 2paq_A 12 LSRLKLINRWPL---MRNVRTENVSEHSLQVAMVAHALAAIKNRKFG--GNV---NAERIALLAMYHDAS 73 (201)
T ss_dssp HGGGGGCBSCTT---SCCSSCCBHHHHHHHHHHHHHHHHHHHHHHSC--CCC---CHHHHHHHHHHTTTT
T ss_pred HHhhccCccCCC---CCCCCCccHHHHHHHHHHHHHHHHhhhHHhcC--ccc---CHHHHHHHHHhcccc
Confidence 346665554432 22223456689999999999999832111111 123 477889999999998
No 47
>2ibn_A Inositol oxygenase; reductase, DIIRON, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: MSE I1N; 1.50A {Homo sapiens} SCOP: a.211.1.4
Probab=94.51 E-value=0.011 Score=49.70 Aligned_cols=44 Identities=27% Similarity=0.269 Sum_probs=31.1
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCC--CCCCc
Q 030373 72 PGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGH--GPFSH 130 (178)
Q Consensus 72 p~a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh--~PfsH 130 (178)
|.-.-+|++|++-+|..|++-. .+..-+++|||+||||+ .+|+|
T Consensus 54 PD~~v~ql~HaLQTAe~ar~dg---------------~d~dw~~laaLlHDLGkll~~~~~ 99 (250)
T 2ibn_A 54 PDVDFPNSFHAFQTAEGIRKAH---------------PDKDWFHLVGLLHDLGKVLALFGE 99 (250)
T ss_dssp ---CCCHHHHHHHHHHHHHHHS---------------TTCHHHHHHHHHTTGGGHHHHTTC
T ss_pred CCCcccHHHHHHHHHHHHHHhC---------------cChhHHHHHHHHhccHhhhcccCC
Confidence 4446689999999998877632 12357899999999998 34544
No 48
>2cqz_A 177AA long hypothetical protein; hypothetical proteins, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.60A {Pyrococcus horikoshii}
Probab=94.44 E-value=0.058 Score=42.33 Aligned_cols=44 Identities=23% Similarity=0.354 Sum_probs=33.2
Q ss_pred CccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcC
Q 030373 75 VHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVG 124 (178)
Q Consensus 75 ~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiG 124 (178)
..|=.+||..|+.+|..++..++... .++ |...+..+||+||++
T Consensus 30 ~esvaeHs~rVa~~A~~la~~~~~~~---~~~---d~~~v~~~aLlHD~~ 73 (177)
T 2cqz_A 30 PESIADHSFGVAFITLVLADVLEKRG---KRI---DVEKALKMAIVHDLA 73 (177)
T ss_dssp CCBHHHHHHHHHHHHHHHHHHHHHTT---CCC---CHHHHHHHHHHTTTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcC---CCC---CHHHHHHHHHHhchH
Confidence 45669999999999999987643221 133 366778999999997
No 49
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=94.08 E-value=0.16 Score=46.06 Aligned_cols=45 Identities=18% Similarity=0.096 Sum_probs=34.7
Q ss_pred cchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCC
Q 030373 79 FEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGH 125 (178)
Q Consensus 79 f~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh 125 (178)
-.|+--|+.+|..+.+.+....+ +...+.+..++++||+|||||.
T Consensus 330 ~~ha~~V~~~a~~Lf~~l~~~~~--l~~~~~~~~lL~~Aa~LhdiG~ 374 (513)
T 1u6z_A 330 SEQARRVLDTTMQMYEQWREQQP--KLAHPQLEALLRWAAMLHEVGL 374 (513)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCG--GGCCHHHHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC--cCCChhHHHHHHHHHHHHHccC
Confidence 57888999999999988765311 0123556789999999999996
No 50
>1ynb_A Hypothetical protein AF1432; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.76A {Archaeoglobus fulgidus} SCOP: a.211.1.1 PDB: 1yoy_A
Probab=93.27 E-value=0.14 Score=40.55 Aligned_cols=60 Identities=22% Similarity=0.138 Sum_probs=42.2
Q ss_pred HHHhHHhHhhhcccceecCC--CCccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcC
Q 030373 54 QFQRLRDLKQLGVTHLVYPG--AVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVG 124 (178)
Q Consensus 54 ~fqRLr~I~Qlg~~~~vyp~--a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiG 124 (178)
...||+.++-.| +++.| ...|=-+||..|+-+|..+... .+++..+..-+...||+||++
T Consensus 16 ~~~~LK~i~R~g---w~~~gv~~~EsVAeHS~~vA~iA~~la~~--------~~vd~~~~~r~~~maL~HDl~ 77 (173)
T 1ynb_A 16 EVGSLKLTPRSG---WLKLGIRLPESVAEHNFRAAIIAFILALK--------SGESVEKACKAATAALFHDLH 77 (173)
T ss_dssp HHHGGGGSBCGG---GGGGTCSSCCBHHHHHHHHHHHHHHHHHH--------TTCCHHHHHHHHHHHHHTTTT
T ss_pred HHHHhccCccCC---cccCCCCCCCcHHHHHHHHHHHHHHHhhh--------cCCChhHHHHHHHHHHHcchH
Confidence 345666665544 34544 4567789999999999998763 246654446667889999997
No 51
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=93.22 E-value=0.14 Score=46.38 Aligned_cols=42 Identities=17% Similarity=0.124 Sum_probs=31.9
Q ss_pred cchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcCCC
Q 030373 79 FEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVGHG 126 (178)
Q Consensus 79 f~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiGh~ 126 (178)
-.|+--|+.+|..+.+.+. +..++.+..++++||+|||||..
T Consensus 333 ~~ha~~V~~~a~~Lf~ql~------~~~~~~~~~lL~~Aa~LhdiG~~ 374 (508)
T 3hi0_A 333 PEHARELADWSGRTFPVFG------IDETEEESRYRQAACLLADISWR 374 (508)
T ss_dssp HHHHHHHHHHHHHHGGGGT------CCCCHHHHHHHHHHHHHTTTTTT
T ss_pred HHHHHHHHHHHHHHHHhhc------cCCChHHHHHHHHHHHHHHHhHH
Confidence 3677788888888776542 23456788999999999999964
No 52
>3aql_A Poly(A) polymerase; transferase/RNA, ATP-binding, nucleotide-binding, RNA-bindin transferase, nucleotidyltransferase, ATP binding, A-phospho; 3.00A {Escherichia coli} PDB: 3aqn_A* 3aqk_A 3aqm_A
Probab=92.87 E-value=0.36 Score=42.79 Aligned_cols=107 Identities=10% Similarity=0.125 Sum_probs=64.6
Q ss_pred hHHHHhcCHHHHh-HHhHhhhcccceecCCCC-----------ccccchHHHHHHHHHHHHHH-HHHccCccCCCCHHHH
Q 030373 45 LALKFIDTEQFQR-LRDLKQLGVTHLVYPGAV-----------HSRFEHSLGVYWLAGAAIQK-LKQNQGLELGIDNFDI 111 (178)
Q Consensus 45 ~~~~IIdt~~fqR-Lr~I~Qlg~~~~vyp~a~-----------htRf~HSLGV~~la~~i~~~-l~~~~~~~~~i~~~d~ 111 (178)
.+.+|+.+|.-.+ |+.+.++|.-..++|.-. ++-.+|++-+ ++. +... ... .
T Consensus 222 E~~kiL~~~~~~~~l~~l~~~GlL~~~lPe~~~i~~~~q~~h~~~v~~h~L~~-------~d~~i~~~----~~~----~ 286 (415)
T 3aql_A 222 ESLKLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENGDSPMERIIEQVLKN-------TDTRIHND----MRV----N 286 (415)
T ss_dssp HHHHHHTSSCHHHHHHHHHHTTCSTTTCHHHHTTCCSSSCCHHHHHHHHHHHH-------HHHHHHTT----CCC----C
T ss_pred HHHHHHcCCCHHHHHHHHHHcCChHHhchhHHHHhccCCcchHHHHHHHHHHH-------HHHHHhcC----CCC----C
Confidence 4567777775544 888888888777777421 1223333332 111 2111 111 2
Q ss_pred HHHHHHHHhh-hcCCCCCCchhhhhhhhhccCCCC--ccHHHHHHHHHHHHHHhCCCCCChhhhhhcc
Q 030373 112 QTVKLAGLLH-DVGHGPFSHLFEREFLPRVVSGCK--WSHEQMSLKMVDHIVDEHHIDLDFEMIKKVK 176 (178)
Q Consensus 112 ~~v~iAALlH-DiGh~PfsH~~E~~~~~~~~~~~~--~~HE~~s~~ii~~il~~~g~~~~~~~I~~I~ 176 (178)
..+.+||||| |+|.+. +. +... .|.+ ..|...+..+++.+++..+++ ..+++.|+
T Consensus 287 ~~L~lAALLH~di~K~~-----~~-~~~~--~G~~~~~~h~~~ga~~a~~~~~rl~l~--~r~~~~v~ 344 (415)
T 3aql_A 287 PAFLFAAMFWYPLLETA-----QK-IAQE--SGLTYHDAFALAMNDVLDEACRSLAIP--KRLTTLTR 344 (415)
T ss_dssp HHHHHHHHTHHHHHHHH-----HH-HHHT--TCCCHHHHHHHHHHHHHHHHHTTSCCC--HHHHHHHH
T ss_pred HHHHHhHhcCcchhhhh-----hh-hhhc--cCCCchHHHHHHHHHHHHHHHHHcCCC--HHHHHHHH
Confidence 4788999999 999641 11 1110 0111 469999999999999999987 77776653
No 53
>1xx7_A Oxetanocin-like protein; PSI, secsg, protein structure initiative, southeast collaboratory for structural genomics; 2.26A {Pyrococcus furiosus} SCOP: a.211.1.1
Probab=89.51 E-value=0.55 Score=37.22 Aligned_cols=44 Identities=27% Similarity=0.462 Sum_probs=31.8
Q ss_pred CccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcC
Q 030373 75 VHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVG 124 (178)
Q Consensus 75 ~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiG 124 (178)
..|=-+||..|+-+|..+....+.. + .+++ ..-+...||+||++
T Consensus 35 ~EsvAeHS~~vA~ia~~la~~~~~~-~--~~~d---~~r~~~~aL~HDl~ 78 (184)
T 1xx7_A 35 PESVADHSYRVAFITLLLAEELKKK-G--VEID---VEKALKIAIIHDLG 78 (184)
T ss_dssp CCBHHHHHHHHHHHHHHHHHHHHHT-T--CCCC---HHHHHHHHHHTTTT
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhhc-c--CCCC---HHHHHHHHHHcCcH
Confidence 3466899999999999998765322 1 2343 55566889999997
No 54
>1vfg_A A-adding enzyme, poly A polymerase; transferase, RNA, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: APC; 2.80A {Aquifex aeolicus} SCOP: a.173.1.1 d.218.1.4
Probab=87.60 E-value=0.79 Score=39.92 Aligned_cols=72 Identities=13% Similarity=0.011 Sum_probs=40.7
Q ss_pred hHHHHhcCHHHHh-HHhHhhhcccceecCCCCccccchHHHHHHHHHH---HHHHHHHccCccCCCCHHHHHHHHHHHHh
Q 030373 45 LALKFIDTEQFQR-LRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGA---AIQKLKQNQGLELGIDNFDIQTVKLAGLL 120 (178)
Q Consensus 45 ~~~~IIdt~~fqR-Lr~I~Qlg~~~~vyp~a~htRf~HSLGV~~la~~---i~~~l~~~~~~~~~i~~~d~~~v~iAALl 120 (178)
...+|+.+|.-.+ |+.+.++|.-..++|.....+ |+.+.... ........... .. .+..++++|||+
T Consensus 195 El~kiL~~~~~~~~l~~l~~~glL~~~lPe~~~~~-----~~~q~l~~~~~~~~~~~~~~~~--~~--~~~~~l~laaLl 265 (390)
T 1vfg_A 195 EIKLALREDRFLEILELYRKYRVLEEIIEGFQWNE-----KVLQKLYALRKVVDWHALEFSE--ER--IDYGWLYLLILI 265 (390)
T ss_dssp HHHHHHHCSSHHHHHHHHHHTTCHHHHSTTCCCCH-----HHHHHHHHHHHHHHHHHHHGGG--SC--CCHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHcCCHHHHhHhhhhhh-----hHHHHHHHHHHHHHHhHHhhhc--cc--cchHHHHHHHHH
Confidence 3566666665444 888888898888889876543 33222111 11111100000 01 124579999999
Q ss_pred hhcCC
Q 030373 121 HDVGH 125 (178)
Q Consensus 121 HDiGh 125 (178)
||+|.
T Consensus 266 hdi~~ 270 (390)
T 1vfg_A 266 SNLDY 270 (390)
T ss_dssp CSCCS
T ss_pred ccCCH
Confidence 99995
No 55
>3mzo_A LIN2634 protein; HD-domain phosphohydrolase, structural genomics, joint cente structural genomics, JCSG, protein structure initiative; HET: MSE; 1.98A {Listeria innocua}
Probab=84.00 E-value=2.6 Score=34.13 Aligned_cols=61 Identities=20% Similarity=0.124 Sum_probs=38.8
Q ss_pred HHhHHhHhhhcccceecCCCCccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcC
Q 030373 55 FQRLRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVG 124 (178)
Q Consensus 55 fqRLr~I~Qlg~~~~vyp~a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiG 124 (178)
..||+.++--+. +..+...|=-+||..|+-+|..++...+.. + .+++ ..-+...||+||++
T Consensus 11 ~~rLK~i~Rw~~---~~~~~~EsvAeHS~~vA~iA~~La~~~~~~-~--~~vD---~~r~~~maL~HDl~ 71 (216)
T 3mzo_A 11 LSDLENIYRCPG---KFKYQEHSVAEHSYKVTSIAQFFGAVEEDA-G--NEVN---WRALYEKALNHDYS 71 (216)
T ss_dssp HHHGGGCBSSCS---SCCSSCCBHHHHHHHHHHHHHHHHHHHHHT-T--CCCC---HHHHHHHHHHTTGG
T ss_pred HHhcCcccCcCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHhc-c--CCCC---HHHHHHHHHHccHH
Confidence 355665554332 222234566899999999999998543221 1 1233 56678899999998
No 56
>3kh1_A Predicted metal-dependent phosphohydrolase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.37A {Magnetospirillum magnetotacticum ms-1}
Probab=78.61 E-value=0.96 Score=36.38 Aligned_cols=40 Identities=23% Similarity=0.157 Sum_probs=29.1
Q ss_pred ccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcC
Q 030373 76 HSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVG 124 (178)
Q Consensus 76 htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiG 124 (178)
.|=-+||..|+-+|..++..+ + .+++ ..-+...||+||++
T Consensus 39 EsVAeHS~~vAliA~~la~~~----~--~~vd---~~r~~~maL~HDl~ 78 (200)
T 3kh1_A 39 ENDAEHSWHIATMAFLLAEYA----D--EAVQ---IGRVARMLLIHDIV 78 (200)
T ss_dssp EEHHHHHHHHHHHHHHTGGGS----C--TTCC---HHHHHHHHHHTTTT
T ss_pred ccHHHHHHHHHHHHHHHHHHc----c--CCCC---HHHHHHHHHhcChH
Confidence 466899999999999887431 1 1233 54567889999998
No 57
>2gz4_A Hypothetical protein ATU1052; structural genomics, PSI, protein structure initiative; 1.50A {Agrobacterium tumefaciens} SCOP: a.211.1.1
Probab=74.55 E-value=2.7 Score=34.00 Aligned_cols=67 Identities=18% Similarity=0.103 Sum_probs=43.6
Q ss_pred ccCCCCcceecChhHHHHhcCHHHHhHHhHhhhcccceecCC-CCccccchHHHHHHHHHHHHHHHHHccCccCCCCHHH
Q 030373 32 VHDNVHGNIYLDPLALKFIDTEQFQRLRDLKQLGVTHLVYPG-AVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFD 110 (178)
Q Consensus 32 i~Dpv~g~i~~~~~~~~IIdt~~fqRLr~I~Qlg~~~~vyp~-a~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d 110 (178)
+-||.-..|.+.+... +|+++.--|. ..++ ...|=-+||+-|+.+|..+. + +++
T Consensus 21 ll~P~~~~i~i~dia~---------~Lk~i~R~~~---~~~~~~~eSVAeHS~~va~ia~~l~-------~---~~~--- 75 (207)
T 2gz4_A 21 LLDPSPLDVEIADIAH---------GLARVARWNG---QTRGDHAFTVAQHCLIVETIFCRMC-------P---GAT--- 75 (207)
T ss_dssp SSSCCGGGCCHHHHHH---------HHTTCBSGGG---CCSSSSCCBHHHHHHHHHHHHHHHC-------T---TCC---
T ss_pred CCCCChhhhhHHHHHH---------HHhhCcccCC---CCCCCCCccHHHHHHHHHHHHHHHC-------C---CCC---
Confidence 4788888887765443 5665544331 1222 23566899999999997763 1 244
Q ss_pred HHHHHHHHHhhhcC
Q 030373 111 IQTVKLAGLLHDVG 124 (178)
Q Consensus 111 ~~~v~iAALlHDiG 124 (178)
.+ +..+||+||++
T Consensus 76 ~r-~~~~aL~HD~~ 88 (207)
T 2gz4_A 76 PD-EMQMALLHDAP 88 (207)
T ss_dssp HH-HHHHHHTTTTT
T ss_pred HH-HHHHHHhcCch
Confidence 22 77889999999
No 58
>1ou5_A TRNA CCA-adding enzyme, tRNA-nucleotidyltransferase; polymerase, translation; 3.40A {Homo sapiens} SCOP: a.173.1.1 d.218.1.4
Probab=71.47 E-value=2.2 Score=38.11 Aligned_cols=62 Identities=13% Similarity=0.184 Sum_probs=40.8
Q ss_pred hHHHHhcCHHHHh-HHhHhhhccccee-cCCCCc-cccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhh
Q 030373 45 LALKFIDTEQFQR-LRDLKQLGVTHLV-YPGAVH-SRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLH 121 (178)
Q Consensus 45 ~~~~IIdt~~fqR-Lr~I~Qlg~~~~v-yp~a~h-tRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlH 121 (178)
.+.+|+.+|.-.+ |+.+.++|.-..+ +|.-.. ..++|.+. .... ++ ...++++|||+|
T Consensus 255 El~kiL~~~~~~~~l~~L~~~GlL~~i~lPe~~~i~~~~~~l~----------~~~~-------~~--~~~~l~lAaLlh 315 (448)
T 1ou5_A 255 ELKKILVGNHVNHLIHLIYDLDVAPYIGLPANASLEEFDKVSK----------NVDG-------FS--PKPVTLLASLFK 315 (448)
T ss_dssp HHHHHHTSTTHHHHHHHHHHTTCGGGGTCCCCSCCHHHHHHHH----------HHTT-------SC--CCHHHHHGGGCC
T ss_pred HHHHHHcCCCHHHHHHHHHHCCCceEecCcchhhHHHHHHHHH----------HHHh-------cC--CCHHHHHHHHhc
Confidence 4677777776655 8888899998888 897654 22333331 1111 11 124789999999
Q ss_pred hcCC
Q 030373 122 DVGH 125 (178)
Q Consensus 122 DiGh 125 (178)
|+|.
T Consensus 316 Di~k 319 (448)
T 1ou5_A 316 VQDD 319 (448)
T ss_dssp STTT
T ss_pred ChHH
Confidence 9996
No 59
>4dmb_A HD domain-containing protein 2; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium (NESG); HET: MSE GOL; 1.90A {Homo sapiens}
Probab=60.78 E-value=3.5 Score=33.19 Aligned_cols=55 Identities=18% Similarity=0.212 Sum_probs=36.3
Q ss_pred HHhHHhHhhhcccceecCCC--CccccchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcC
Q 030373 55 FQRLRDLKQLGVTHLVYPGA--VHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVG 124 (178)
Q Consensus 55 fqRLr~I~Qlg~~~~vyp~a--~htRf~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiG 124 (178)
..||+.++--|. +..|. ..|=-+||..|+-+|..+.. .+++ ..-+...||+||++
T Consensus 24 ~~~LK~i~R~g~---~~~gv~~~ESVAEHS~~vAliA~~l~~---------~~vD---~~r~~~maL~HDl~ 80 (204)
T 4dmb_A 24 VGQLKRVPRTGW---VYRNVQRPESVSDHMYRMAVMAMVIKD---------DRLN---KDRCVRLALVHDMA 80 (204)
T ss_dssp HHHGGGCBCHHH---HHTTCSSCCBHHHHHHHHHHHHHHSCC---------TTSC---HHHHHHHHHHTTTT
T ss_pred HHHhccCccCCC---cCCCCCCCCcHHHHHHHHHHHHHHHcc---------ccCC---HHHHHHHHHhcchH
Confidence 456666655442 33332 35668999999999987742 1233 44567789999998
No 60
>3nr1_A HD domain-containing protein 3; stringent response, pyrophosphohydrolase, HD (histidine and acid) family, PPGPP hydrolase, hydrolase; 1.90A {Homo sapiens}
Probab=57.89 E-value=3.1 Score=32.55 Aligned_cols=32 Identities=38% Similarity=0.504 Sum_probs=21.2
Q ss_pred cchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcC
Q 030373 79 FEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVG 124 (178)
Q Consensus 79 f~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiG 124 (178)
+.|.++|+.+... ++++.+ ....+||||||+=
T Consensus 32 i~Hpl~VA~il~~-----------~~~~~d---~~~i~AALLHDvv 63 (178)
T 3nr1_A 32 INHPIGVARILTH-----------EAGITD---IVVLQAALLHDTV 63 (178)
T ss_dssp THHHHHHHHHHHH-----------TSCCCC---HHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHH-----------HcCCCC---HHHHHHHHhhhHH
Confidence 7899999976521 133311 2458899999974
No 61
>3nqw_A CG11900; stringent response, pyrophosphohydrolase, HD (histidine and acid) family ,PPGPP hydrolase, hydrolase; 2.90A {Drosophila melanogaster}
Probab=53.96 E-value=3.6 Score=32.19 Aligned_cols=32 Identities=34% Similarity=0.442 Sum_probs=21.2
Q ss_pred cchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcC
Q 030373 79 FEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVG 124 (178)
Q Consensus 79 f~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiG 124 (178)
+.|.++|+.+... ++++.+ ....+||||||+=
T Consensus 34 i~Hpl~VA~ila~-----------~l~~~D---~~~i~AAlLHDvv 65 (179)
T 3nqw_A 34 VNHVINVSTILSV-----------EACITD---EGVLMAALLHDVV 65 (179)
T ss_dssp HHHHHHHHHHHHT-----------TTCCCC---HHHHHHHHTTTHH
T ss_pred HHHHHHHHHHHHH-----------HcCCCC---HHHHHHHHhhhHH
Confidence 7899999976431 133421 2357899999974
No 62
>1vj7_A Bifunctional RELA/SPOT; HD domain, alpha beta 2-layer sandwich, helix bundle, mangan PPG2':3'P, (P)PPGPP, PPGPP; HET: GDP GPX; 2.10A {Streptococcus dysgalactiae subsp} SCOP: a.211.1.1 d.218.1.8
Probab=47.70 E-value=15 Score=32.39 Aligned_cols=30 Identities=30% Similarity=0.413 Sum_probs=21.5
Q ss_pred cchHHHHHHHHHHHHHHHHHccCccCCCCHHHHHHHHHHHHhhhcC
Q 030373 79 FEHSLGVYWLAGAAIQKLKQNQGLELGIDNFDIQTVKLAGLLHDVG 124 (178)
Q Consensus 79 f~HSLGV~~la~~i~~~l~~~~~~~~~i~~~d~~~v~iAALlHDiG 124 (178)
+.|.++|+.+... ++.+. ...+||||||+-
T Consensus 51 i~Hpl~VA~iLa~------------l~~D~----~~i~AALLHDvv 80 (393)
T 1vj7_A 51 IVHPIQVAGILAD------------LHLDA----VTVACGFLHDVV 80 (393)
T ss_dssp THHHHHHHHHHHH------------TTCCH----HHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHH------------hcCCH----HHHHHHHhhhHH
Confidence 8899999987543 23432 257999999964
No 63
>1miw_A TRNA CCA-adding enzyme; tRNA nucleotidyltransferase, translation, transferase; HET: ATP; 3.00A {Geobacillus stearothermophilus} SCOP: a.173.1.1 d.218.1.4 PDB: 1miv_A* 1miy_A*
Probab=47.54 E-value=11 Score=33.02 Aligned_cols=14 Identities=29% Similarity=0.337 Sum_probs=11.8
Q ss_pred HHHHHHHHhhhcCC
Q 030373 112 QTVKLAGLLHDVGH 125 (178)
Q Consensus 112 ~~v~iAALlHDiGh 125 (178)
..+..|||+||+|.
T Consensus 248 ~~l~~aaLlhdigk 261 (404)
T 1miw_A 248 REERWALLCHALGV 261 (404)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHhCCH
Confidence 35789999999995
No 64
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=44.91 E-value=11 Score=32.64 Aligned_cols=28 Identities=29% Similarity=0.620 Sum_probs=18.9
Q ss_pred hhcCCCCCCchhhhhhhhhccCCCCccH-HHHHHHH
Q 030373 121 HDVGHGPFSHLFEREFLPRVVSGCKWSH-EQMSLKM 155 (178)
Q Consensus 121 HDiGh~PfsH~~E~~~~~~~~~~~~~~H-E~~s~~i 155 (178)
-+.||. |||++|... +..+.| |..+.-|
T Consensus 251 Ln~GHT-~gHAiE~~~------~~~~~HGeaVaiGm 279 (368)
T 3qbe_A 251 LNYGHT-LGHAIERRE------RYRWRHGAAVSVGL 279 (368)
T ss_dssp GGTTHH-HHHHHHHHT------TTCSCHHHHHHHHH
T ss_pred hccchH-HHHHHHHhc------CCCCchHHHHHHHH
Confidence 368888 899999753 225777 6665544
No 65
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=41.25 E-value=14 Score=32.30 Aligned_cols=28 Identities=32% Similarity=0.554 Sum_probs=18.7
Q ss_pred hcCCCCCCchhhhhhhhhccCCCCccH-HHHHHHH
Q 030373 122 DVGHGPFSHLFEREFLPRVVSGCKWSH-EQMSLKM 155 (178)
Q Consensus 122 DiGh~PfsH~~E~~~~~~~~~~~~~~H-E~~s~~i 155 (178)
+.||. |||++|.... ...+.| |..+.-|
T Consensus 272 n~GHT-~gHAiE~~~~-----~~~~~HGeaVaiGm 300 (390)
T 3okf_A 272 NLGHT-FGHAIEAHMG-----YGNWLHGEAVSAGT 300 (390)
T ss_dssp GTTHH-HHHHHHHHHC-----TTTSCHHHHHHHHH
T ss_pred ccchH-HHHHHHHhhC-----CCCCChHHHHHHHH
Confidence 88997 9999997531 124677 6665544
No 66
>2omk_A Hypothetical protein; succinimide, thiamin pyrophosphokinase, structural genomics, protein structure initiative; 1.80A {Bacteroides thetaiotaomicron}
Probab=39.57 E-value=27 Score=28.22 Aligned_cols=41 Identities=22% Similarity=0.319 Sum_probs=33.2
Q ss_pred HHHh-HHhHhhhcccceecCCCCccccchHHHHHHHHHHHHH
Q 030373 54 QFQR-LRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGAAIQ 94 (178)
Q Consensus 54 ~fqR-Lr~I~Qlg~~~~vyp~a~htRf~HSLGV~~la~~i~~ 94 (178)
.+.+ |+.+.+.|....+.-|+.-.|++|.++..++..+..+
T Consensus 107 D~e~Al~~a~~~g~~~I~i~Ga~GgRlDH~laNi~lL~~~~~ 148 (231)
T 2omk_A 107 DQTKAVHYLQSKGIRKIAIVGATGKREDHTLGNISLLVEYMR 148 (231)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEECccCCchhHHHHHHHHHHHHHh
Confidence 4555 6777777888788889999999999999999887654
No 67
>2lbf_A 60S acidic ribosomal protein P1; ribosome, stalk, P1/P2; NMR {Homo sapiens}
Probab=34.42 E-value=32 Score=22.91 Aligned_cols=20 Identities=20% Similarity=0.096 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHhhhcCCCCC
Q 030373 109 FDIQTVKLAGLLHDVGHGPF 128 (178)
Q Consensus 109 ~d~~~v~iAALlHDiGh~Pf 128 (178)
.+..|+++|-||||.|..|=
T Consensus 5 ~ela~~YAAllL~~~g~~~t 24 (69)
T 2lbf_A 5 SELACIYSALILHDDEVTVT 24 (69)
T ss_dssp HHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHHcCCCCCC
Confidence 46789999999999997663
No 68
>2huo_A Inositol oxygenase; protein-substrate complex, HD domain fold, oxidoreductase; HET: INS; 2.00A {Mus musculus} SCOP: a.211.1.4 PDB: 3bxd_A*
Probab=31.70 E-value=20 Score=30.50 Aligned_cols=15 Identities=47% Similarity=0.711 Sum_probs=12.9
Q ss_pred HHHHHHHHhhhcCCC
Q 030373 112 QTVKLAGLLHDVGHG 126 (178)
Q Consensus 112 ~~v~iAALlHDiGh~ 126 (178)
.=+++.||+||+|..
T Consensus 118 dW~qLtGLiHDLGKv 132 (289)
T 2huo_A 118 DWFHLVGLLHDLGKI 132 (289)
T ss_dssp HHHHHHHHHTTGGGG
T ss_pred chheeeeecccchhh
Confidence 468999999999975
No 69
>3lm8_A Thiamine pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: VIB; 2.60A {Bacillus subtilis}
Probab=31.20 E-value=40 Score=26.94 Aligned_cols=36 Identities=19% Similarity=0.064 Sum_probs=28.7
Q ss_pred HHhHhhhcccceecCCCCccccchHHHHHHHHHHHH
Q 030373 58 LRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGAAI 93 (178)
Q Consensus 58 Lr~I~Qlg~~~~vyp~a~htRf~HSLGV~~la~~i~ 93 (178)
|+.+.+.|....+.=||.-.|++|+++..++..+..
T Consensus 86 l~~a~~~g~~~I~i~Ga~GgR~DH~lani~ll~~~~ 121 (222)
T 3lm8_A 86 LDWALEKQPDIIQIFGITGGRADHFLGNIQLLYKGV 121 (222)
T ss_dssp HHHHHHHCCSEEEEESCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEcCCCCchhHHHHHHHHHHHHH
Confidence 555566677777778999999999999888877653
No 70
>3k94_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.10A {Geobacillus thermodenitrificans}
Probab=27.36 E-value=43 Score=26.88 Aligned_cols=34 Identities=21% Similarity=0.105 Sum_probs=28.1
Q ss_pred HHhHhhhcccceecCCCCccccchHHHHHHHHHH
Q 030373 58 LRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGA 91 (178)
Q Consensus 58 Lr~I~Qlg~~~~vyp~a~htRf~HSLGV~~la~~ 91 (178)
|+.+.+.|....+.=||.-.|++|+++..++..+
T Consensus 85 l~~a~~~g~~~I~i~Ga~GGR~DH~lani~lL~~ 118 (223)
T 3k94_A 85 LDWAVEQTARCIRLFGATGGRLDHLFGNVELLLK 118 (223)
T ss_dssp HHHHHTTCCSEEEEESCSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEcCCCCchhHHHHHHHHHHh
Confidence 5666666777777789999999999999988775
No 71
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=25.48 E-value=40 Score=23.23 Aligned_cols=28 Identities=21% Similarity=0.417 Sum_probs=22.7
Q ss_pred eecCh--hHHHHhcCHHHHhHHhHhhhccc
Q 030373 40 IYLDP--LALKFIDTEQFQRLRDLKQLGVT 67 (178)
Q Consensus 40 i~~~~--~~~~IIdt~~fqRLr~I~Qlg~~ 67 (178)
|++|+ ...+..+||+||.++.+|+-+..
T Consensus 58 ieFps~~aa~a~y~SpeYq~a~~~R~~a~~ 87 (94)
T 3lo3_A 58 LEFPSREDAYNWYHSEEYQALISTRDLGMD 87 (94)
T ss_dssp EEESSHHHHHHHHHSHHHHTTHHHHHHHEE
T ss_pred EECCCHHHHHHHHCCHHHHHHHHHHHhcCc
Confidence 35664 67899999999999999987654
No 72
>3l8m_A Probable thiamine pyrophosphokinase; thiamin diphosphate biosynthetic process, ATP binding, structural genomics, PSI-2; 2.40A {Staphylococcus saprophyticus}
Probab=25.44 E-value=43 Score=26.46 Aligned_cols=35 Identities=17% Similarity=0.288 Sum_probs=28.6
Q ss_pred HHhHhhhcccceecCCCCccccchHHHHHHHHHHH
Q 030373 58 LRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGAA 92 (178)
Q Consensus 58 Lr~I~Qlg~~~~vyp~a~htRf~HSLGV~~la~~i 92 (178)
|+.+.+.|....+.=||.-.|++|+++..++..+.
T Consensus 82 l~~a~~~~~~~I~i~Ga~GgR~DH~lani~ll~~~ 116 (212)
T 3l8m_A 82 IDQAVKRGYRNIDVYGATGGRLDHFMGALQILEKP 116 (212)
T ss_dssp HHHHHHTTCCEEEEESCSSSCHHHHHHHHHHHTCH
T ss_pred HHHHHHCCCCEEEEEcCCCCchhHHHHHHHHHHhh
Confidence 55556678877788899999999999999988654
No 73
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=23.63 E-value=44 Score=28.90 Aligned_cols=51 Identities=18% Similarity=0.381 Sum_probs=32.1
Q ss_pred CCCCCchhhhhhhhhccCCCCccH--HHHHHHHHHHHHHhCCCCCChhhhhhccc
Q 030373 125 HGPFSHLFEREFLPRVVSGCKWSH--EQMSLKMVDHIVDEHHIDLDFEMIKKVKV 177 (178)
Q Consensus 125 h~PfsH~~E~~~~~~~~~~~~~~H--E~~s~~ii~~il~~~g~~~~~~~I~~I~~ 177 (178)
-+|++..|+.++.+.......|+- .++..+-++..|++-|++ .++|+.|.+
T Consensus 30 ~gpl~~~fd~~~~d~~fG~~t~e~a~sdLa~~Aa~~AL~~AGi~--~~DID~II~ 82 (347)
T 3lma_A 30 EGPLGHLFDKSYDEMHCNQKNWEMAERKLMEDAVQSALSKQNLK--KEDIDIFLA 82 (347)
T ss_dssp HSTTGGGSSEECSSTTTTSSSHHHHHHHHHHHHHHHHHHTTTCC--GGGCSEEEE
T ss_pred cCCchhhchhhhcccccCCcCccHHHHHHHHHHHHHHHHHcCCC--HHHCCEEEE
Confidence 478888888765433322222321 234555578889999977 899998754
Done!