Query 030377
Match_columns 178
No_of_seqs 132 out of 2074
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 12:48:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030377.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030377hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 100.0 1.3E-29 2.9E-34 166.4 8.0 134 27-170 29-165 (226)
2 KOG4412 26S proteasome regulat 100.0 8.7E-28 1.9E-32 157.9 9.9 133 27-169 64-197 (226)
3 PHA02859 ankyrin repeat protei 99.9 1E-23 2.2E-28 147.8 15.6 161 4-172 16-187 (209)
4 KOG0509 Ankyrin repeat and DHH 99.9 2.2E-24 4.7E-29 164.9 12.3 149 13-171 57-205 (600)
5 PHA02791 ankyrin-like protein; 99.9 6.2E-24 1.3E-28 154.4 13.4 124 35-170 61-186 (284)
6 PHA02791 ankyrin-like protein; 99.9 9.4E-24 2E-28 153.4 14.1 153 10-173 62-223 (284)
7 PHA02741 hypothetical protein; 99.9 1.4E-23 3E-28 142.6 13.7 134 27-170 13-158 (169)
8 PHA02743 Viral ankyrin protein 99.9 2E-23 4.4E-28 141.3 12.3 141 27-177 12-161 (166)
9 PHA02875 ankyrin repeat protei 99.9 4.4E-23 9.5E-28 158.4 15.1 93 71-169 101-193 (413)
10 PHA02875 ankyrin repeat protei 99.9 5.4E-23 1.2E-27 157.9 14.2 131 31-171 98-229 (413)
11 PHA02878 ankyrin repeat protei 99.9 1.6E-22 3.4E-27 157.9 15.2 136 25-172 157-295 (477)
12 PHA02878 ankyrin repeat protei 99.9 3.4E-22 7.4E-27 156.0 15.1 114 50-172 149-263 (477)
13 PHA03100 ankyrin repeat protei 99.9 2.3E-22 4.9E-27 157.1 13.7 131 28-168 169-307 (480)
14 PHA02874 ankyrin repeat protei 99.9 5.7E-22 1.2E-26 153.1 15.2 136 29-170 62-216 (434)
15 PHA03095 ankyrin-like protein; 99.9 4.5E-22 9.7E-27 155.1 13.8 140 25-172 37-182 (471)
16 PHA03100 ankyrin repeat protei 99.9 6.5E-22 1.4E-26 154.5 14.7 135 27-171 133-277 (480)
17 PHA02874 ankyrin repeat protei 99.9 7.1E-22 1.5E-26 152.6 14.5 116 27-150 116-231 (434)
18 PHA02946 ankyin-like protein; 99.9 4.9E-22 1.1E-26 153.4 13.5 134 26-165 63-231 (446)
19 PHA02884 ankyrin repeat protei 99.9 2.2E-21 4.8E-26 141.3 14.0 127 23-153 20-148 (300)
20 PHA02716 CPXV016; CPX019; EVM0 99.9 1.2E-21 2.6E-26 157.0 13.1 139 26-172 167-347 (764)
21 KOG0502 Integral membrane anky 99.9 4.3E-22 9.4E-27 135.0 8.4 122 26-155 151-272 (296)
22 PLN03192 Voltage-dependent pot 99.9 2E-21 4.3E-26 160.0 14.0 136 26-173 549-684 (823)
23 PHA02716 CPXV016; CPX019; EVM0 99.9 2.7E-21 5.9E-26 155.0 14.2 139 26-172 203-394 (764)
24 PHA02798 ankyrin-like protein; 99.9 1.9E-21 4E-26 152.3 12.7 136 26-169 100-316 (489)
25 KOG0509 Ankyrin repeat and DHH 99.9 6.3E-22 1.4E-26 151.6 9.1 131 26-166 102-234 (600)
26 PHA02736 Viral ankyrin protein 99.9 1.1E-21 2.5E-26 131.3 9.3 133 27-169 9-151 (154)
27 PHA02859 ankyrin repeat protei 99.9 6.5E-21 1.4E-25 133.6 12.6 130 32-172 18-153 (209)
28 KOG0195 Integrin-linked kinase 99.9 2.4E-21 5.2E-26 136.5 10.2 137 24-170 23-159 (448)
29 KOG0508 Ankyrin repeat protein 99.9 1.2E-21 2.7E-26 145.6 8.7 129 26-165 108-236 (615)
30 PHA02989 ankyrin repeat protei 99.9 6E-21 1.3E-25 149.6 13.1 132 29-167 139-312 (494)
31 PHA03095 ankyrin-like protein; 99.9 1.5E-20 3.4E-25 146.5 14.9 138 26-171 74-216 (471)
32 PHA02946 ankyin-like protein; 99.9 1.1E-20 2.4E-25 145.9 12.9 126 32-168 138-267 (446)
33 KOG0508 Ankyrin repeat protein 99.8 3.3E-21 7.2E-26 143.4 8.0 127 33-169 82-208 (615)
34 PHA02876 ankyrin repeat protei 99.8 4.9E-20 1.1E-24 149.5 15.3 134 28-170 334-469 (682)
35 PHA02989 ankyrin repeat protei 99.8 3E-20 6.5E-25 145.7 13.6 141 25-173 98-285 (494)
36 KOG0512 Fetal globin-inducing 99.8 2.2E-20 4.8E-25 122.4 10.5 110 38-155 66-176 (228)
37 PHA02795 ankyrin-like protein; 99.8 4E-20 8.6E-25 140.0 12.4 131 36-170 150-288 (437)
38 PHA02798 ankyrin-like protein; 99.8 3.9E-20 8.4E-25 144.9 12.7 138 26-171 62-213 (489)
39 KOG0514 Ankyrin repeat protein 99.8 9.2E-21 2E-25 136.9 7.9 138 28-170 261-433 (452)
40 PHA02743 Viral ankyrin protein 99.8 1.5E-19 3.3E-24 122.4 12.8 109 27-143 49-162 (166)
41 KOG0510 Ankyrin repeat protein 99.8 3.2E-20 6.9E-25 145.6 10.5 138 27-170 265-403 (929)
42 PHA02730 ankyrin-like protein; 99.8 9.1E-20 2E-24 144.1 12.6 160 2-170 343-524 (672)
43 KOG0512 Fetal globin-inducing 99.8 7E-20 1.5E-24 120.1 9.8 125 21-152 83-208 (228)
44 PF12796 Ank_2: Ankyrin repeat 99.8 2.3E-19 4.9E-24 109.3 11.3 85 39-133 1-85 (89)
45 PHA02876 ankyrin repeat protei 99.8 2.5E-19 5.3E-24 145.4 14.6 136 27-171 299-436 (682)
46 KOG4177 Ankyrin [Cell wall/mem 99.8 7.6E-20 1.7E-24 150.1 10.4 156 4-169 469-631 (1143)
47 cd00204 ANK ankyrin repeats; 99.8 1.1E-18 2.3E-23 112.2 13.4 123 31-163 3-125 (126)
48 PHA02795 ankyrin-like protein; 99.8 3.6E-19 7.8E-24 134.8 12.2 134 30-173 111-250 (437)
49 PHA02917 ankyrin-like protein; 99.8 5.3E-19 1.1E-23 141.8 12.4 134 28-171 25-165 (661)
50 PHA02730 ankyrin-like protein; 99.8 2.2E-18 4.7E-23 136.4 14.2 134 29-170 35-181 (672)
51 PHA02917 ankyrin-like protein; 99.8 1.5E-18 3.2E-23 139.2 12.2 123 37-165 105-252 (661)
52 PLN03192 Voltage-dependent pot 99.8 2.2E-18 4.9E-23 142.1 13.6 130 32-173 522-651 (823)
53 KOG0502 Integral membrane anky 99.8 4.5E-18 9.8E-23 115.6 9.9 133 28-172 122-254 (296)
54 PHA02884 ankyrin repeat protei 99.8 2E-17 4.3E-22 120.7 13.4 120 32-168 67-186 (300)
55 PHA02741 hypothetical protein; 99.8 1.4E-17 2.9E-22 113.2 11.7 101 26-132 51-157 (169)
56 PHA02736 Viral ankyrin protein 99.8 3.9E-18 8.6E-23 114.2 8.7 120 8-133 16-152 (154)
57 KOG0510 Ankyrin repeat protein 99.8 1.2E-17 2.7E-22 131.3 12.7 157 11-171 189-368 (929)
58 PHA02792 ankyrin-like protein; 99.8 8.4E-18 1.8E-22 131.9 11.2 129 34-170 338-479 (631)
59 KOG0505 Myosin phosphatase, re 99.7 1.7E-17 3.7E-22 125.2 9.9 136 27-170 65-257 (527)
60 KOG4214 Myotrophin and similar 99.7 8.5E-17 1.8E-21 94.9 9.3 103 37-148 4-106 (117)
61 PF12796 Ank_2: Ankyrin repeat 99.7 5.5E-17 1.2E-21 98.7 8.6 87 76-172 1-87 (89)
62 TIGR00870 trp transient-recept 99.7 5.3E-17 1.2E-21 133.0 10.8 130 33-166 126-279 (743)
63 PHA02792 ankyrin-like protein; 99.7 7.4E-17 1.6E-21 126.7 10.9 136 25-166 61-239 (631)
64 KOG4177 Ankyrin [Cell wall/mem 99.7 5.1E-17 1.1E-21 133.7 9.7 153 10-172 441-601 (1143)
65 KOG3676 Ca2+-permeable cation 99.7 1.7E-16 3.6E-21 125.1 11.0 148 15-166 160-330 (782)
66 COG0666 Arp FOG: Ankyrin repea 99.7 2.1E-15 4.5E-20 106.3 14.5 129 28-166 66-202 (235)
67 TIGR00870 trp transient-recept 99.7 4.7E-16 1E-20 127.5 11.5 99 70-170 126-243 (743)
68 KOG0507 CASK-interacting adapt 99.7 1.4E-16 3E-21 124.6 6.3 131 26-166 40-170 (854)
69 PTZ00322 6-phosphofructo-2-kin 99.6 6.5E-15 1.4E-19 118.9 12.4 105 38-150 85-196 (664)
70 KOG0505 Myosin phosphatase, re 99.6 1.7E-15 3.8E-20 114.5 7.9 127 21-151 92-273 (527)
71 KOG0515 p53-interacting protei 99.6 7.1E-15 1.5E-19 111.3 9.6 125 38-169 553-677 (752)
72 KOG0195 Integrin-linked kinase 99.6 6.1E-15 1.3E-19 104.4 7.8 115 43-167 8-123 (448)
73 KOG0514 Ankyrin repeat protein 99.6 1.2E-14 2.6E-19 105.6 8.8 92 32-129 337-429 (452)
74 KOG1710 MYND Zn-finger and ank 99.6 3.5E-14 7.6E-19 100.4 10.4 98 25-127 35-132 (396)
75 PF13637 Ank_4: Ankyrin repeat 99.6 1.6E-14 3.5E-19 79.4 6.6 54 72-127 1-54 (54)
76 PF13637 Ank_4: Ankyrin repeat 99.5 3.5E-14 7.5E-19 78.1 6.7 54 35-92 1-54 (54)
77 PF13857 Ank_5: Ankyrin repeat 99.5 9.2E-15 2E-19 80.9 3.6 50 96-149 7-56 (56)
78 KOG3676 Ca2+-permeable cation 99.5 6.9E-14 1.5E-18 110.6 8.4 141 25-169 133-298 (782)
79 KOG4214 Myotrophin and similar 99.5 1.1E-13 2.3E-18 81.9 6.7 74 34-113 33-106 (117)
80 PF13857 Ank_5: Ankyrin repeat 99.5 4.3E-14 9.4E-19 78.2 4.6 55 54-114 1-56 (56)
81 cd00204 ANK ankyrin repeats; 99.5 1.2E-12 2.6E-17 83.8 12.0 93 29-127 34-126 (126)
82 KOG1710 MYND Zn-finger and ank 99.4 9E-13 2E-17 93.4 8.9 121 34-163 11-131 (396)
83 COG0666 Arp FOG: Ankyrin repea 99.4 2E-12 4.3E-17 91.0 9.8 99 26-130 97-203 (235)
84 KOG0507 CASK-interacting adapt 99.4 1.1E-12 2.3E-17 103.3 8.8 91 33-129 80-170 (854)
85 PTZ00322 6-phosphofructo-2-kin 99.4 1.1E-12 2.4E-17 106.1 8.6 86 75-166 85-170 (664)
86 KOG0818 GTPase-activating prot 99.4 4.7E-12 1E-16 95.5 9.9 102 23-129 115-222 (669)
87 KOG0515 p53-interacting protei 99.3 3.5E-12 7.7E-17 96.9 7.5 98 26-128 574-673 (752)
88 KOG4369 RTK signaling protein 99.2 9.3E-12 2E-16 101.9 4.8 130 33-171 755-884 (2131)
89 KOG4369 RTK signaling protein 99.2 1.3E-11 2.8E-16 101.1 4.7 154 11-171 759-919 (2131)
90 KOG0705 GTPase-activating prot 99.1 5.2E-10 1.1E-14 86.1 9.6 117 15-133 604-720 (749)
91 KOG0506 Glutaminase (contains 99.1 2E-10 4.4E-15 86.5 5.6 94 32-131 503-597 (622)
92 KOG0783 Uncharacterized conser 99.1 6E-11 1.3E-15 94.7 2.1 132 26-165 43-174 (1267)
93 KOG0783 Uncharacterized conser 99.0 2.9E-10 6.2E-15 90.9 4.4 80 69-151 49-128 (1267)
94 PF13606 Ank_3: Ankyrin repeat 99.0 1.4E-09 3.1E-14 51.8 4.0 27 107-133 2-28 (30)
95 KOG0818 GTPase-activating prot 98.9 4E-09 8.6E-14 80.1 7.6 88 75-165 136-225 (669)
96 PF13606 Ank_3: Ankyrin repeat 98.9 1.9E-09 4.1E-14 51.4 3.8 29 34-62 1-29 (30)
97 KOG0782 Predicted diacylglycer 98.9 1.2E-08 2.6E-13 78.9 7.8 117 39-165 870-988 (1004)
98 PF00023 Ank: Ankyrin repeat H 98.9 7.3E-09 1.6E-13 50.6 4.5 27 107-133 2-28 (33)
99 KOG0522 Ankyrin repeat protein 98.8 2.3E-08 5.1E-13 76.5 7.7 87 37-129 22-110 (560)
100 KOG0506 Glutaminase (contains 98.7 1.7E-08 3.8E-13 76.3 5.5 94 70-168 504-597 (622)
101 PF00023 Ank: Ankyrin repeat H 98.7 2.7E-08 5.8E-13 48.6 4.3 30 35-64 2-31 (33)
102 KOG0782 Predicted diacylglycer 98.7 5.9E-08 1.3E-12 75.2 6.8 100 26-131 890-991 (1004)
103 KOG2384 Major histocompatibili 98.5 4.6E-07 9.9E-12 61.0 7.1 84 27-114 4-88 (223)
104 KOG0511 Ankyrin repeat protein 98.5 4.7E-07 1E-11 67.0 7.8 125 36-169 37-174 (516)
105 KOG0705 GTPase-activating prot 98.5 2.5E-07 5.3E-12 71.8 6.4 91 76-170 628-720 (749)
106 KOG0522 Ankyrin repeat protein 98.5 2.3E-07 5E-12 71.2 5.9 78 74-155 22-101 (560)
107 KOG0511 Ankyrin repeat protein 98.5 1.1E-06 2.4E-11 65.2 8.5 71 73-147 37-107 (516)
108 KOG0521 Putative GTPase activa 98.4 5.3E-07 1.1E-11 74.0 5.0 85 33-123 654-738 (785)
109 KOG3609 Receptor-activated Ca2 98.3 3.1E-06 6.8E-11 68.5 7.4 97 26-133 53-157 (822)
110 KOG0520 Uncharacterized conser 98.2 2.9E-06 6.3E-11 70.0 6.5 128 30-166 569-702 (975)
111 KOG0521 Putative GTPase activa 98.2 1.3E-06 2.9E-11 71.7 4.4 89 71-163 655-743 (785)
112 KOG2384 Major histocompatibili 98.2 1.3E-05 2.7E-10 54.3 7.4 83 59-147 3-86 (223)
113 KOG3609 Receptor-activated Ca2 97.7 0.0001 2.3E-09 60.0 6.4 122 34-170 24-157 (822)
114 KOG2505 Ankyrin repeat protein 97.5 0.00057 1.2E-08 52.8 7.3 64 85-150 404-471 (591)
115 smart00248 ANK ankyrin repeats 97.4 0.00048 1E-08 31.1 3.9 27 35-61 2-28 (30)
116 KOG0520 Uncharacterized conser 97.3 0.00021 4.5E-09 59.5 3.8 95 31-129 604-702 (975)
117 smart00248 ANK ankyrin repeats 97.3 0.00063 1.4E-08 30.7 3.9 27 107-133 2-28 (30)
118 KOG2505 Ankyrin repeat protein 97.1 0.00088 1.9E-08 51.8 5.0 76 47-127 403-480 (591)
119 PF11929 DUF3447: Domain of un 94.9 0.082 1.8E-06 30.7 4.5 48 36-94 7-54 (76)
120 PF06128 Shigella_OspC: Shigel 93.3 1 2.3E-05 32.0 8.0 25 107-131 254-278 (284)
121 PF11929 DUF3447: Domain of un 93.3 0.24 5.2E-06 28.7 4.3 47 74-129 8-54 (76)
122 PF06128 Shigella_OspC: Shigel 92.9 0.31 6.7E-06 34.5 5.0 52 46-98 228-280 (284)
123 PF03158 DUF249: Multigene fam 90.3 1.1 2.4E-05 30.7 5.3 113 33-164 74-190 (192)
124 PF03158 DUF249: Multigene fam 83.8 3.4 7.3E-05 28.5 4.7 45 75-127 146-190 (192)
125 KOG4591 Uncharacterized conser 35.7 43 0.00093 23.6 2.6 43 73-117 223-270 (280)
126 KOG1709 Guanidinoacetate methy 26.5 67 0.0014 23.2 2.3 39 55-97 2-40 (271)
127 PF12854 PPR_1: PPR repeat 25.9 85 0.0018 14.6 2.1 20 109-128 12-31 (34)
128 KOG0292 Vesicle coat complex C 21.5 3.7E+02 0.008 24.1 6.0 54 37-98 648-701 (1202)
129 PF01671 ASFV_360: African swi 20.1 1.1E+02 0.0024 21.7 2.4 52 39-99 116-169 (215)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1.3e-29 Score=166.35 Aligned_cols=134 Identities=35% Similarity=0.514 Sum_probs=103.4
Q ss_pred hcccCCC-CCCcHHHHHHHcCCHHHHHHHHH-cCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHc-CCCCccccC
Q 030377 27 SVIDTDD-RGWTPLHIGARKGDIKLVKQLLD-EGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLER-GADIDARTK 103 (178)
Q Consensus 27 ~~~~~~~-~g~t~l~~A~~~~~~~~v~~ll~-~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~-~~~~~~~~~ 103 (178)
+++.++. +|+|||||||..|+.+++++|++ .+..++.. |..||||||+|+..|+.++|+.|+.+ |+++|..++
T Consensus 29 SL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddk----DdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn 104 (226)
T KOG4412|consen 29 SLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDK----DDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTN 104 (226)
T ss_pred hhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCc----cccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecC
Confidence 4444444 88888888888888888888884 34445544 67788888888888888888888887 788888777
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhhc
Q 030377 104 GACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAG 170 (178)
Q Consensus 104 ~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~ 170 (178)
. |+|+||||+..|..+|+++|++.|+.+ +++|..|+||||-|+..|.. +++++|....+..
T Consensus 105 ~--G~T~LHyAagK~r~eIaqlLle~ga~i--~~kD~~~qtplHRAAavGkl--kvie~Li~~~a~~ 165 (226)
T KOG4412|consen 105 G--GQTCLHYAAGKGRLEIAQLLLEKGALI--RIKDKQGQTPLHRAAAVGKL--KVIEYLISQGAPL 165 (226)
T ss_pred C--CcceehhhhcCChhhHHHHHHhcCCCC--cccccccCchhHHHHhccch--hhHHHHHhcCCCC
Confidence 7 888888888888888888888888866 77888888888888877665 8888888766443
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=8.7e-28 Score=157.86 Aligned_cols=133 Identities=40% Similarity=0.565 Sum_probs=120.0
Q ss_pred hcccCCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCC
Q 030377 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLDE-GMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (178)
Q Consensus 27 ~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~-~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~ 105 (178)
.++.+|..||||||.|+..|+.++|+.|+.+ |+++|.. +..|.||||+|+..+..+|+.+|+..|+.++.+|..
T Consensus 64 ~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~----tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~- 138 (226)
T KOG4412|consen 64 KPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNAT----TNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQ- 138 (226)
T ss_pred CCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCccee----cCCCcceehhhhcCChhhHHHHHHhcCCCCcccccc-
Confidence 4677899999999999999999999999999 9999998 889999999999999999999999999999998888
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhh
Q 030377 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (178)
Q Consensus 106 ~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~ 169 (178)
|.||||.|+..|.++++++|+..|+.+ +.+|..|+||||.|...+.. ++-.+|.+.+.+
T Consensus 139 -~qtplHRAAavGklkvie~Li~~~a~~--n~qDk~G~TpL~~al~e~~~--d~a~lLV~~gAd 197 (226)
T KOG4412|consen 139 -GQTPLHRAAAVGKLKVIEYLISQGAPL--NTQDKYGFTPLHHALAEGHP--DVAVLLVRAGAD 197 (226)
T ss_pred -cCchhHHHHhccchhhHHHHHhcCCCC--CcccccCccHHHHHHhccCc--hHHHHHHHhccc
Confidence 999999999999999999999999977 99999999999999655554 555666555543
No 3
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.92 E-value=1e-23 Score=147.79 Aligned_cols=161 Identities=19% Similarity=0.252 Sum_probs=130.3
Q ss_pred hhhhccCCcchhhhhhhH----HhhhhhcccCCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCccccccCCCCCCCcHHH
Q 030377 4 SMVHEQLGPFTLQRKASR----KRFFRSVIDTDDRGWTPLHIGARKG--DIKLVKQLLDEGMDVNVAAWGPKSKGVTPLH 77 (178)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~t~l~~A~~~~--~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~ 77 (178)
.+.....+|+..+..... +.++...+..|..|.||||+|+..+ +.+++++|++.|++++... +..|.||||
T Consensus 16 ~~~~~~~~pL~~A~~~~~~~~vk~Li~~~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~---~~~g~TpLh 92 (209)
T PHA02859 16 YLFYRYCNPLFYYVEKDDIEGVKKWIKFVNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKT---RDNNLSALH 92 (209)
T ss_pred HHhhccCcHHHHHHHhCcHHHHHHHHHhhhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccC---CCCCCCHHH
Confidence 344455677776655553 4445557788999999999999854 8999999999999999872 357999999
Q ss_pred HHHhc---CCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHH--hCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccc
Q 030377 78 LAAQG---GHLEVMDVLLERGADIDARTKGACGWTPLHTAAK--ERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSL 152 (178)
Q Consensus 78 ~a~~~---~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~--~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~ 152 (178)
+|+.. ++.+++++|+.+|++++..+.. |.||||+|+. .++.+++++|++.|+++ +..|..|.||+|.++..
T Consensus 93 ~a~~~~~~~~~eiv~~Ll~~gadin~~d~~--G~TpLh~a~~~~~~~~~iv~~Li~~gadi--n~~d~~g~t~Lh~~a~~ 168 (209)
T PHA02859 93 HYLSFNKNVEPEILKILIDSGSSITEEDED--GKNLLHMYMCNFNVRINVIKLLIDSGVSF--LNKDFDNNNILYSYILF 168 (209)
T ss_pred HHHHhCccccHHHHHHHHHCCCCCCCcCCC--CCCHHHHHHHhccCCHHHHHHHHHcCCCc--ccccCCCCcHHHHHHHh
Confidence 98764 4789999999999999998887 9999999986 46899999999999988 78899999999965432
Q ss_pred cccHHHHHHHHHHhhhhcCC
Q 030377 153 EWAYEEMMRFQRESFSAGET 172 (178)
Q Consensus 153 ~~~~~e~~~~l~~~~~~~~~ 172 (178)
+ ...+++++|.+...+...
T Consensus 169 ~-~~~~iv~~Ll~~Gadi~~ 187 (209)
T PHA02859 169 H-SDKKIFDFLTSLGIDINE 187 (209)
T ss_pred c-CCHHHHHHHHHcCCCCCC
Confidence 2 346999999988776543
No 4
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.92 E-value=2.2e-24 Score=164.92 Aligned_cols=149 Identities=32% Similarity=0.425 Sum_probs=128.6
Q ss_pred chhhhhhhHHhhhhhcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHH
Q 030377 13 FTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLL 92 (178)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~ 92 (178)
+...+.....+ ..++++.|.+|.++||+|+..+..+++++|+++|+++|... +..+.||||+|+++|+..++.+|+
T Consensus 57 l~~v~~lve~~-g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~g---G~l~stPLHWAar~G~~~vv~lLl 132 (600)
T KOG0509|consen 57 LETVKELVESE-GESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIG---GVLGSTPLHWAARNGHISVVDLLL 132 (600)
T ss_pred HHHHHHHHhhc-CcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccC---CCCCCCcchHHHHcCcHHHHHHHH
Confidence 33333333333 67789999999999999999999999999999999999874 477899999999999999999999
Q ss_pred HcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhhcC
Q 030377 93 ERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAGE 171 (178)
Q Consensus 93 ~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~~ 171 (178)
++|++++..|.. |-+|+|.|++.|+.-.+-+|+.+|+++ +.+|.+|.|||++|+..+.... +.+|....+...
T Consensus 133 qhGAdpt~~D~~--G~~~lHla~~~~~~~~vayll~~~~d~--d~~D~~grTpLmwAaykg~~~~--v~~LL~f~a~~~ 205 (600)
T KOG0509|consen 133 QHGADPTLKDKQ--GLTPLHLAAQFGHTALVAYLLSKGADI--DLRDNNGRTPLMWAAYKGFALF--VRRLLKFGASLL 205 (600)
T ss_pred HcCCCCceecCC--CCcHHHHHHHhCchHHHHHHHHhcccC--CCcCCCCCCHHHHHHHhcccHH--HHHHHHhccccc
Confidence 999999999988 999999999999999999999999877 8899999999999998887643 555555544443
No 5
>PHA02791 ankyrin-like protein; Provisional
Probab=99.92 E-value=6.2e-24 Score=154.36 Aligned_cols=124 Identities=23% Similarity=0.233 Sum_probs=69.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCC-CcHHHH
Q 030377 35 GWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACG-WTPLHT 113 (178)
Q Consensus 35 g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g-~t~l~~ 113 (178)
|.||||+|+..|+.+++++|+..|++++.. +..|.||||+|+..++.+++++|+..|++++..+.. | .||||+
T Consensus 61 ~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~----d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~--g~~TpL~~ 134 (284)
T PHA02791 61 NEFPLHQAATLEDTKIVKILLFSGMDDSQF----DDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKT--GWKTSFYH 134 (284)
T ss_pred CCCHHHHHHHCCCHHHHHHHHHCCCCCCCC----CCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCC--CCcHHHHH
Confidence 455666666666666666665555555554 455566666666666666666666665555554444 4 256666
Q ss_pred HHHhCCHHHHHHHHHcCCCCCCCCCC-CCCCCcccccccccccHHHHHHHHHHhhhhc
Q 030377 114 AAKERKKEAVRFLIENGAFLPDDIND-SRFNPPLHYCPSLEWAYEEMMRFQRESFSAG 170 (178)
Q Consensus 114 a~~~~~~~i~~~Ll~~g~~~~~~~~~-~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~ 170 (178)
|+..|+.+++++|++.+.+. .| ..|.||||+|+..+. .+++++|.+..+++
T Consensus 135 Aa~~g~~eivk~LL~~~~~~----~d~~~g~TpLh~Aa~~g~--~eiv~lLL~~gAd~ 186 (284)
T PHA02791 135 AVMLNDVSIVSYFLSEIPST----FDLAILLSCIHITIKNGH--VDMMILLLDYMTST 186 (284)
T ss_pred HHHcCCHHHHHHHHhcCCcc----cccccCccHHHHHHHcCC--HHHHHHHHHCCCCC
Confidence 66666666666666554321 12 135566666665544 36666666655544
No 6
>PHA02791 ankyrin-like protein; Provisional
Probab=99.92 E-value=9.4e-24 Score=153.41 Aligned_cols=153 Identities=14% Similarity=0.074 Sum_probs=125.1
Q ss_pred CCcchhhhhhhHHh-------hhhhcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCC-CcHHHHHHh
Q 030377 10 LGPFTLQRKASRKR-------FFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKG-VTPLHLAAQ 81 (178)
Q Consensus 10 ~~~~~~~~~~~~~~-------~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~-~t~l~~a~~ 81 (178)
.+|+..+......+ ...+++.+|..|+||||+|+..|+.+++++|++.|++++.. +..| .||||+|+.
T Consensus 62 ~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~----~~~g~~TpL~~Aa~ 137 (284)
T PHA02791 62 EFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFY----GKTGWKTSFYHAVM 137 (284)
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcc----CCCCCcHHHHHHHH
Confidence 46777666544322 22345667889999999999999999999999999999876 5666 489999999
Q ss_pred cCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCc-ccccccccccHHHHH
Q 030377 82 GGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPP-LHYCPSLEWAYEEMM 160 (178)
Q Consensus 82 ~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~-l~~a~~~~~~~~e~~ 160 (178)
.++.+++++|+..+.+.. +. ..|.||||+|+..|+.+++++|++.|+++ +..|..|.|| ||+|+..+.. +++
T Consensus 138 ~g~~eivk~LL~~~~~~~--d~-~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~--n~~d~~g~t~~L~~Aa~~~~~--e~v 210 (284)
T PHA02791 138 LNDVSIVSYFLSEIPSTF--DL-AILLSCIHITIKNGHVDMMILLLDYMTST--NTNNSLLFIPDIKLAIDNKDL--EML 210 (284)
T ss_pred cCCHHHHHHHHhcCCccc--cc-ccCccHHHHHHHcCCHHHHHHHHHCCCCC--CcccCCCCChHHHHHHHcCCH--HHH
Confidence 999999999999865431 21 12889999999999999999999999988 7788889977 9999988765 999
Q ss_pred HHHHHhhhhcCCC
Q 030377 161 RFQRESFSAGETS 173 (178)
Q Consensus 161 ~~l~~~~~~~~~~ 173 (178)
++|.+...+...+
T Consensus 211 ~lLl~~Ga~in~~ 223 (284)
T PHA02791 211 QALFKYDINIYSV 223 (284)
T ss_pred HHHHHCCCCCccC
Confidence 9999987776543
No 7
>PHA02741 hypothetical protein; Provisional
Probab=99.91 E-value=1.4e-23 Score=142.64 Aligned_cols=134 Identities=26% Similarity=0.369 Sum_probs=117.0
Q ss_pred hcccCCCCCCcHHHHHHHcCCHHHHHHHHH------cCCCccccccCCCCCCCcHHHHHHhcCC----HHHHHHHHHcCC
Q 030377 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLD------EGMDVNVAAWGPKSKGVTPLHLAAQGGH----LEVMDVLLERGA 96 (178)
Q Consensus 27 ~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~------~~~~~~~~~~~~~~~~~t~l~~a~~~~~----~~~~~~L~~~~~ 96 (178)
.+..+|..|.|+||+|+..|+.++++.|+. .|++++.. +..|.||||+|+..++ .+++++|+..|+
T Consensus 13 ~~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~----d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~ga 88 (169)
T PHA02741 13 MIAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNAT----DDAGQMCIHIAAEKHEAQLAAEIIDHLIELGA 88 (169)
T ss_pred HhhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhcc----CCCCCcHHHHHHHcCChHHHHHHHHHHHHcCC
Confidence 356788999999999999999999999864 25677776 7889999999999998 588999999999
Q ss_pred CCccccC-CCCCCcHHHHHHHhCCHHHHHHHHH-cCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhhc
Q 030377 97 DIDARTK-GACGWTPLHTAAKERKKEAVRFLIE-NGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAG 170 (178)
Q Consensus 97 ~~~~~~~-~~~g~t~l~~a~~~~~~~i~~~Ll~-~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~ 170 (178)
+++.++. . |+||||+|+..++.+++++|+. .|+++ +..|..|.|||++|+..+. .+++++|.+.....
T Consensus 89 din~~~~~~--g~TpLh~A~~~~~~~iv~~Ll~~~g~~~--~~~n~~g~tpL~~A~~~~~--~~iv~~L~~~~~~~ 158 (169)
T PHA02741 89 DINAQEMLE--GDTALHLAAHRRDHDLAEWLCCQPGIDL--HFCNADNKSPFELAIDNED--VAMMQILREIVATS 158 (169)
T ss_pred CCCCCCcCC--CCCHHHHHHHcCCHHHHHHHHhCCCCCC--CcCCCCCCCHHHHHHHCCC--HHHHHHHHHHHHHh
Confidence 9998764 5 9999999999999999999998 58877 8889999999999998765 49999999876554
No 8
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.91 E-value=2e-23 Score=141.29 Aligned_cols=141 Identities=21% Similarity=0.264 Sum_probs=119.2
Q ss_pred hcccCCCCCCcHHHHHHHcCCH----HHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHH---HHHHHHHcCCCCc
Q 030377 27 SVIDTDDRGWTPLHIGARKGDI----KLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLE---VMDVLLERGADID 99 (178)
Q Consensus 27 ~~~~~~~~g~t~l~~A~~~~~~----~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~---~~~~L~~~~~~~~ 99 (178)
+....+..+.+++|.||+.|+. +++++|++.|..++.. +..|+||||+|+..++.+ ++++|+..|++++
T Consensus 12 ~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~----d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin 87 (166)
T PHA02743 12 GAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRY----DHHGRQCTHMVAWYDRANAVMKIELLVNMGADIN 87 (166)
T ss_pred HHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhcc----CCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCC
Confidence 3455777888999999999998 5666777888888876 788999999999998765 4799999999999
Q ss_pred ccc-CCCCCCcHHHHHHHhCCHHHHHHHHH-cCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhhcCCCCCCC
Q 030377 100 ART-KGACGWTPLHTAAKERKKEAVRFLIE-NGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAGETSYSSE 177 (178)
Q Consensus 100 ~~~-~~~~g~t~l~~a~~~~~~~i~~~Ll~-~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~~~~~~~~ 177 (178)
..+ .. |.||||+|+..++.+++++|++ .|+++ +..|..|.||||+|+..+. .+++++|.+.......+..++
T Consensus 88 ~~d~~~--g~TpLh~A~~~g~~~iv~~Ll~~~gad~--~~~d~~g~tpL~~A~~~~~--~~iv~~Ll~~ga~~~~~~~~~ 161 (166)
T PHA02743 88 ARELGT--GNTLLHIAASTKNYELAEWLCRQLGVNL--GAINYQHETAYHIAYKMRD--RRMMEILRANGAVCDDPLSIG 161 (166)
T ss_pred CCCCCC--CCcHHHHHHHhCCHHHHHHHHhccCCCc--cCcCCCCCCHHHHHHHcCC--HHHHHHHHHcCCCCCCcccCC
Confidence 876 35 9999999999999999999996 79887 7789999999999997765 499999999877766555444
No 9
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.91 E-value=4.4e-23 Score=158.39 Aligned_cols=93 Identities=31% Similarity=0.421 Sum_probs=44.2
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccc
Q 030377 71 KGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCP 150 (178)
Q Consensus 71 ~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~ 150 (178)
.|.||||+|+..++.+++++|++.|++++..+.. |.||||+|+..|+.+++++|++.|+++ +..|..|.||||+|+
T Consensus 101 ~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~--g~tpLh~A~~~~~~~~v~~Ll~~g~~~--~~~d~~g~TpL~~A~ 176 (413)
T PHA02875 101 DGMTPLHLATILKKLDIMKLLIARGADPDIPNTD--KFSPLHLAVMMGDIKGIELLIDHKACL--DIEDCCGCTPLIIAM 176 (413)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHhcCCCC--CCCCCCCCCHHHHHH
Confidence 3444555555555555555555544444444443 445555555555555555555544444 444444455555544
Q ss_pred cccccHHHHHHHHHHhhhh
Q 030377 151 SLEWAYEEMMRFQRESFSA 169 (178)
Q Consensus 151 ~~~~~~~e~~~~l~~~~~~ 169 (178)
..+. .+++++|.+...+
T Consensus 177 ~~g~--~eiv~~Ll~~ga~ 193 (413)
T PHA02875 177 AKGD--IAICKMLLDSGAN 193 (413)
T ss_pred HcCC--HHHHHHHHhCCCC
Confidence 4333 2444444444433
No 10
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.90 E-value=5.4e-23 Score=157.89 Aligned_cols=131 Identities=23% Similarity=0.350 Sum_probs=119.1
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcH
Q 030377 31 TDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTP 110 (178)
Q Consensus 31 ~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~ 110 (178)
.+..|.||||+|+..|+.+++++|++.|++++.. +..|.||||+|+..++.+++++|+.+|++++..+.. |.||
T Consensus 98 ~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~----~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~--g~Tp 171 (413)
T PHA02875 98 FYKDGMTPLHLATILKKLDIMKLLIARGADPDIP----NTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCC--GCTP 171 (413)
T ss_pred ccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCC----CCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC--CCCH
Confidence 3567999999999999999999999999999987 788999999999999999999999999999988877 9999
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCC-CcccccccccccHHHHHHHHHHhhhhcC
Q 030377 111 LHTAAKERKKEAVRFLIENGAFLPDDINDSRFN-PPLHYCPSLEWAYEEMMRFQRESFSAGE 171 (178)
Q Consensus 111 l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~-t~l~~a~~~~~~~~e~~~~l~~~~~~~~ 171 (178)
||+|+..|+.+++++|++.|+++ +..+..|. ||+|+|+..+. .+++++|.+...+..
T Consensus 172 L~~A~~~g~~eiv~~Ll~~ga~~--n~~~~~~~~t~l~~A~~~~~--~~iv~~Ll~~gad~n 229 (413)
T PHA02875 172 LIIAMAKGDIAICKMLLDSGANI--DYFGKNGCVAALCYAIENNK--IDIVRLFIKRGADCN 229 (413)
T ss_pred HHHHHHcCCHHHHHHHHhCCCCC--CcCCCCCCchHHHHHHHcCC--HHHHHHHHHCCcCcc
Confidence 99999999999999999999988 66777775 78888987765 499999999887764
No 11
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.90 E-value=1.6e-22 Score=157.90 Aligned_cols=136 Identities=27% Similarity=0.355 Sum_probs=119.5
Q ss_pred hhhcccCCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccC
Q 030377 25 FRSVIDTDDR-GWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTK 103 (178)
Q Consensus 25 ~~~~~~~~~~-g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~ 103 (178)
..+++..+.. |.||||+|+..|+.+++++|++.|++++.. +..|.||||.|+..++.+++++|+..|++++..+.
T Consensus 157 gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~----d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~ 232 (477)
T PHA02878 157 GADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIP----DKTNNSPLHHAVKHYNKPIVHILLENGASTDARDK 232 (477)
T ss_pred CCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCc----CCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCC
Confidence 3456677777 999999999999999999999999999987 78899999999999999999999999999999887
Q ss_pred CCCCCcHHHHHHHh-CCHHHHHHHHHcCCCCCCCCCCC-CCCCcccccccccccHHHHHHHHHHhhhhcCC
Q 030377 104 GACGWTPLHTAAKE-RKKEAVRFLIENGAFLPDDINDS-RFNPPLHYCPSLEWAYEEMMRFQRESFSAGET 172 (178)
Q Consensus 104 ~~~g~t~l~~a~~~-~~~~i~~~Ll~~g~~~~~~~~~~-~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~~~ 172 (178)
. |.||||+|+.. ++.+++++|++.|+++ +..+. .|.||||+|. + ..+++++|.+...++..
T Consensus 233 ~--g~TpLh~A~~~~~~~~iv~~Ll~~gadv--n~~~~~~g~TpLh~A~--~--~~~~v~~Ll~~gadin~ 295 (477)
T PHA02878 233 C--GNTPLHISVGYCKDYDILKLLLEHGVDV--NAKSYILGLTALHSSI--K--SERKLKLLLEYGADINS 295 (477)
T ss_pred C--CCCHHHHHHHhcCCHHHHHHHHHcCCCC--CccCCCCCCCHHHHHc--c--CHHHHHHHHHCCCCCCC
Confidence 7 99999999975 7899999999999988 66664 7899999994 2 35889999988777653
No 12
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.89 E-value=3.4e-22 Score=156.01 Aligned_cols=114 Identities=31% Similarity=0.417 Sum_probs=97.8
Q ss_pred HHHHHHHcCCCccccccCCCCC-CCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHH
Q 030377 50 LVKQLLDEGMDVNVAAWGPKSK-GVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIE 128 (178)
Q Consensus 50 ~v~~ll~~~~~~~~~~~~~~~~-~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~ 128 (178)
++++|++.|++++.. +.. |.||||+|+..++.+++++|+..|++++..+.. |.||||+|+..|+.+++++|++
T Consensus 149 iv~~Ll~~gadin~~----~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~--g~tpLh~A~~~~~~~iv~~Ll~ 222 (477)
T PHA02878 149 ITKLLLSYGADINMK----DRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKT--NNSPLHHAVKHYNKPIVHILLE 222 (477)
T ss_pred HHHHHHHcCCCCCcc----CCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCC--CCCHHHHHHHhCCHHHHHHHHH
Confidence 555666667777766 555 999999999999999999999999999988877 9999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhhcCC
Q 030377 129 NGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAGET 172 (178)
Q Consensus 129 ~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~~~ 172 (178)
.|+++ +..|..|.||||+|+..+ ...+++++|.+...+...
T Consensus 223 ~ga~i--n~~d~~g~TpLh~A~~~~-~~~~iv~~Ll~~gadvn~ 263 (477)
T PHA02878 223 NGAST--DARDKCGNTPLHISVGYC-KDYDILKLLLEHGVDVNA 263 (477)
T ss_pred cCCCC--CCCCCCCCCHHHHHHHhc-CCHHHHHHHHHcCCCCCc
Confidence 99988 888999999999998542 245999999988776643
No 13
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.89 E-value=2.3e-22 Score=157.13 Aligned_cols=131 Identities=34% Similarity=0.520 Sum_probs=82.5
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCC------CcHHHHHHhcCC--HHHHHHHHHcCCCCc
Q 030377 28 VIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKG------VTPLHLAAQGGH--LEVMDVLLERGADID 99 (178)
Q Consensus 28 ~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~------~t~l~~a~~~~~--~~~~~~L~~~~~~~~ 99 (178)
++.++..|.||||+|+..|+.+++++|++.|++++.. +..| .||+|.|+..++ .+++++|+..|++++
T Consensus 169 in~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~----~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din 244 (480)
T PHA03100 169 INAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAG----DIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPIN 244 (480)
T ss_pred cccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCC----CCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCC
Confidence 3444555666666666666666666666666665554 3444 566666666666 666666666666666
Q ss_pred cccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhh
Q 030377 100 ARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (178)
Q Consensus 100 ~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~ 168 (178)
..+.. |.||||+|+..|+.+++++|++.|+++ +..|..|.||+++|+..+. .+++++|.+..+
T Consensus 245 ~~d~~--g~TpL~~A~~~~~~~iv~~Ll~~gad~--n~~d~~g~tpl~~A~~~~~--~~iv~~Ll~~g~ 307 (480)
T PHA03100 245 IKDVY--GFTPLHYAVYNNNPEFVKYLLDLGANP--NLVNKYGDTPLHIAILNNN--KEIFKLLLNNGP 307 (480)
T ss_pred CCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CccCCCCCcHHHHHHHhCC--HHHHHHHHhcCC
Confidence 66555 667777777777777777777777655 6666667777777765543 366666666544
No 14
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.89 E-value=5.7e-22 Score=153.10 Aligned_cols=136 Identities=24% Similarity=0.369 Sum_probs=88.4
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccc-------------------ccCCCCCCCcHHHHHHhcCCHHHHH
Q 030377 29 IDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVA-------------------AWGPKSKGVTPLHLAAQGGHLEVMD 89 (178)
Q Consensus 29 ~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~-------------------~~~~~~~~~t~l~~a~~~~~~~~~~ 89 (178)
+..+..|.||||.|+..|+.+++++|++.|+++... ....+..|.||||+|+..++.++++
T Consensus 62 n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~ 141 (434)
T PHA02874 62 NHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIK 141 (434)
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHH
Confidence 344555666666666666666666666665443210 0011455677777777777777777
Q ss_pred HHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhh
Q 030377 90 VLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (178)
Q Consensus 90 ~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~ 169 (178)
+|+..|++++..+.. |.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..+. .+++++|.+...+
T Consensus 142 ~Ll~~gad~n~~d~~--g~tpLh~A~~~~~~~iv~~Ll~~g~~~--n~~~~~g~tpL~~A~~~g~--~~iv~~Ll~~g~~ 215 (434)
T PHA02874 142 MLFEYGADVNIEDDN--GCYPIHIAIKHNFFDIIKLLLEKGAYA--NVKDNNGESPLHNAAEYGD--YACIKLLIDHGNH 215 (434)
T ss_pred HHHhCCCCCCCcCCC--CCCHHHHHHHCCcHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHcCC--HHHHHHHHhCCCC
Confidence 777777777766655 777777777777777777777777766 5666777777777776654 3777777766554
Q ss_pred c
Q 030377 170 G 170 (178)
Q Consensus 170 ~ 170 (178)
.
T Consensus 216 i 216 (434)
T PHA02874 216 I 216 (434)
T ss_pred C
Confidence 3
No 15
>PHA03095 ankyrin-like protein; Provisional
Probab=99.89 E-value=4.5e-22 Score=155.10 Aligned_cols=140 Identities=30% Similarity=0.368 Sum_probs=120.1
Q ss_pred hhhcccCCCCCCcHHHHHHHcC---CHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcC-CHHHHHHHHHcCCCCcc
Q 030377 25 FRSVIDTDDRGWTPLHIGARKG---DIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGG-HLEVMDVLLERGADIDA 100 (178)
Q Consensus 25 ~~~~~~~~~~g~t~l~~A~~~~---~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~~L~~~~~~~~~ 100 (178)
..+++.++..|.||||+|+..+ ..++++.|++.|++++.. +..|.||||+|+..+ ..+++++|+..|++++.
T Consensus 37 ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~----~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~ 112 (471)
T PHA03095 37 GADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAP----ERCGFTPLHLYLYNATTLDVIKLLIKAGADVNA 112 (471)
T ss_pred CCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCC----CCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCC
Confidence 3557778888999999999988 899999999999999987 678999999999999 58999999999999998
Q ss_pred ccCCCCCCcHHHHHH--HhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhhcCC
Q 030377 101 RTKGACGWTPLHTAA--KERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAGET 172 (178)
Q Consensus 101 ~~~~~~g~t~l~~a~--~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~~~ 172 (178)
.+.. |.||||+|+ ..++.+++++|++.|+++ +..|..|.||+|+|+..+....+++++|.+...+...
T Consensus 113 ~~~~--g~tpLh~a~~~~~~~~~iv~~Ll~~gad~--~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~ 182 (471)
T PHA03095 113 KDKV--GRTPLHVYLSGFNINPKVIRLLLRKGADV--NALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYA 182 (471)
T ss_pred CCCC--CCCHHHHHhhCCcCCHHHHHHHHHcCCCC--CccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcc
Confidence 8877 999999999 556789999999999987 7888999999998887666667889998887665543
No 16
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.88 E-value=6.5e-22 Score=154.54 Aligned_cols=135 Identities=33% Similarity=0.488 Sum_probs=107.6
Q ss_pred hcccCCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCC
Q 030377 27 SVIDTDDRGWTPLHIGARKG--DIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKG 104 (178)
Q Consensus 27 ~~~~~~~~g~t~l~~A~~~~--~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~ 104 (178)
++...+..|.||||+|+..+ +.+++++|++.|++++.. +..|.||||+|+..++.+++++|+.+|++++..+..
T Consensus 133 ~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~----d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~ 208 (480)
T PHA03100 133 NVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAK----NRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIE 208 (480)
T ss_pred CCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccc----cCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCC
Confidence 45556777888888888888 788888888888887776 567888888888888888888888888888776655
Q ss_pred CCC------CcHHHHHHHhCC--HHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhhcC
Q 030377 105 ACG------WTPLHTAAKERK--KEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAGE 171 (178)
Q Consensus 105 ~~g------~t~l~~a~~~~~--~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~~ 171 (178)
| .||+|+|+..|+ .+++++|++.|+++ +.+|..|.||||+|+..+. .+++++|.+...++.
T Consensus 209 --~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~di--n~~d~~g~TpL~~A~~~~~--~~iv~~Ll~~gad~n 277 (480)
T PHA03100 209 --TLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPI--NIKDVYGFTPLHYAVYNNN--PEFVKYLLDLGANPN 277 (480)
T ss_pred --CCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHcCC--HHHHHHHHHcCCCCC
Confidence 6 788888888888 88888888888877 7788888999999987655 588899888777554
No 17
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.88 E-value=7.1e-22 Score=152.60 Aligned_cols=116 Identities=30% Similarity=0.488 Sum_probs=98.3
Q ss_pred hcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCC
Q 030377 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGAC 106 (178)
Q Consensus 27 ~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~ 106 (178)
+++.++..|.||||+|+..|+.+++++|++.|++++.. +..|.||||+|+..++.+++++|+..|++++..+..
T Consensus 116 d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~----d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~-- 189 (434)
T PHA02874 116 DVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIE----DDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNN-- 189 (434)
T ss_pred CCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCc----CCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCC--
Confidence 45667889999999999999999999999999999887 788999999999999999999999999999888777
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccc
Q 030377 107 GWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCP 150 (178)
Q Consensus 107 g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~ 150 (178)
|.||||+|+..|+.+++++|++.|+++ ...+..|.||||.|+
T Consensus 190 g~tpL~~A~~~g~~~iv~~Ll~~g~~i--~~~~~~g~TpL~~A~ 231 (434)
T PHA02874 190 GESPLHNAAEYGDYACIKLLIDHGNHI--MNKCKNGFTPLHNAI 231 (434)
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCC--cCCCCCCCCHHHHHH
Confidence 999999999999999999999998865 333344444444443
No 18
>PHA02946 ankyin-like protein; Provisional
Probab=99.88 E-value=4.9e-22 Score=153.38 Aligned_cols=134 Identities=24% Similarity=0.332 Sum_probs=92.6
Q ss_pred hhcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcC--CHHHHHHHHHcCCCCcc-cc
Q 030377 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGG--HLEVMDVLLERGADIDA-RT 102 (178)
Q Consensus 26 ~~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~--~~~~~~~L~~~~~~~~~-~~ 102 (178)
.+++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..+ ..+++++|+.+|++++. .+
T Consensus 63 advn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~----d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d 138 (446)
T PHA02946 63 YSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNAC----DKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVD 138 (446)
T ss_pred CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCC----CCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccC
Confidence 457788899999999999999999999999999999987 788999999987765 36778888888877763 23
Q ss_pred CC------------------------------CCCCcHHHHHHHhCC--HHHHHHHHHcCCCCCCCCCCCCCCCcccccc
Q 030377 103 KG------------------------------ACGWTPLHTAAKERK--KEAVRFLIENGAFLPDDINDSRFNPPLHYCP 150 (178)
Q Consensus 103 ~~------------------------------~~g~t~l~~a~~~~~--~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~ 150 (178)
.. ..|+||||+|+..++ .+++++|++.|+++ +.+|..|.||||+|+
T Consensus 139 ~~g~tpL~aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadi--n~~d~~G~TpLH~Aa 216 (446)
T PHA02946 139 EEGCGPLLACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISP--SKPDHDGNTPLHIVC 216 (446)
T ss_pred CCCCcHHHHHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCC--cccCCCCCCHHHHHH
Confidence 33 114455555444332 35555566666655 555666666666666
Q ss_pred cccccHHHHHHHHHH
Q 030377 151 SLEWAYEEMMRFQRE 165 (178)
Q Consensus 151 ~~~~~~~e~~~~l~~ 165 (178)
..+....+++++|.+
T Consensus 217 ~~~~~~~~iv~lLl~ 231 (446)
T PHA02946 217 SKTVKNVDIINLLLP 231 (446)
T ss_pred HcCCCcHHHHHHHHc
Confidence 544334455555553
No 19
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.88 E-value=2.2e-21 Score=141.29 Aligned_cols=127 Identities=16% Similarity=0.213 Sum_probs=108.0
Q ss_pred hhhhhcccCCCCCCc-HHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccc
Q 030377 23 RFFRSVIDTDDRGWT-PLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDAR 101 (178)
Q Consensus 23 ~~~~~~~~~~~~g~t-~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~ 101 (178)
-|.-.+..+|..|++ +|+.|+..|+.+++++|++.|++++......+..|.||||+|+..++.+++++|+++|++++..
T Consensus 20 ~~~~~~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~ 99 (300)
T PHA02884 20 IFYIAIKKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRY 99 (300)
T ss_pred HHHHHhhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcc
Confidence 344446678888876 5777788899999999999999998752111347999999999999999999999999999975
Q ss_pred c-CCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCccccccccc
Q 030377 102 T-KGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLE 153 (178)
Q Consensus 102 ~-~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~ 153 (178)
+ .. |.||||+|+..++.+++++|++.|+++ +.+|..|.||+|+|+..+
T Consensus 100 ~~~~--g~TpLh~Aa~~~~~eivklLL~~GAdi--n~kd~~G~TpL~~A~~~~ 148 (300)
T PHA02884 100 AEEA--KITPLYISVLHGCLKCLEILLSYGADI--NIQTNDMVTPIELALMIC 148 (300)
T ss_pred cCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHhC
Confidence 3 45 899999999999999999999999988 888999999999997643
No 20
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.87 E-value=1.2e-21 Score=157.02 Aligned_cols=139 Identities=22% Similarity=0.277 Sum_probs=116.6
Q ss_pred hhcccC-CCCCCcHHHHHHH--cCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCC--HHHHHHHHHcCCCCcc
Q 030377 26 RSVIDT-DDRGWTPLHIGAR--KGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGH--LEVMDVLLERGADIDA 100 (178)
Q Consensus 26 ~~~~~~-~~~g~t~l~~A~~--~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~--~~~~~~L~~~~~~~~~ 100 (178)
.+++.+ |..|.||||+|+. .++.+++++|++.|++++.. +..|.||||+|+..++ .+++++|+++|++++.
T Consensus 167 ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~k----D~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~ 242 (764)
T PHA02716 167 VNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQ----NNHLITPLHTYLITGNVCASVIKKIIELGGDMDM 242 (764)
T ss_pred CCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCC----CCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCC
Confidence 345556 7889999998864 46789999999999999988 8899999999999985 5899999999999999
Q ss_pred ccCCCCCCcHHHHHH-------------------------------------HhCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 030377 101 RTKGACGWTPLHTAA-------------------------------------KERKKEAVRFLIENGAFLPDDINDSRFN 143 (178)
Q Consensus 101 ~~~~~~g~t~l~~a~-------------------------------------~~~~~~i~~~Ll~~g~~~~~~~~~~~g~ 143 (178)
++.. |+||||+|+ ..|+.+++++|++.|+++ +.+|..|.
T Consensus 243 kD~~--G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdI--N~kD~~G~ 318 (764)
T PHA02716 243 KCVN--GMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKL--HYKDSAGR 318 (764)
T ss_pred CCCC--CCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCce--eccCCCCC
Confidence 8877 999999753 447788999999999987 88899999
Q ss_pred CcccccccccccHHHHHHHHHHhhhhcCC
Q 030377 144 PPLHYCPSLEWAYEEMMRFQRESFSAGET 172 (178)
Q Consensus 144 t~l~~a~~~~~~~~e~~~~l~~~~~~~~~ 172 (178)
||||+|+..+.+..+++++|.+...+...
T Consensus 319 TPLH~Aaa~~~~~~eIVklLLe~GADIN~ 347 (764)
T PHA02716 319 TCLHQYILRHNISTDIIKLLHEYGNDLNE 347 (764)
T ss_pred CHHHHHHHHhCCCchHHHHHHHcCCCCcc
Confidence 99998875554556999999988766543
No 21
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.87 E-value=4.3e-22 Score=135.01 Aligned_cols=122 Identities=29% Similarity=0.398 Sum_probs=114.9
Q ss_pred hhcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCC
Q 030377 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (178)
Q Consensus 26 ~~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~ 105 (178)
..++..|+.|.|||.||+..|+..+|++|++.|+++... .....++|+.|++.|..++|++|+.++.++|..|-+
T Consensus 151 n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~l----gk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwN- 225 (296)
T KOG0502|consen 151 NKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDAL----GKYRESALSLATRGGYTDIVELLLTREVDVNVYDWN- 225 (296)
T ss_pred ccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhh----hhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccC-
Confidence 346778999999999999999999999999999999987 778889999999999999999999999999999988
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCccccccccccc
Q 030377 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWA 155 (178)
Q Consensus 106 ~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~ 155 (178)
|-|||-||++.++.+|++.|+..|+++ +..+..|.+++..|+..|+.
T Consensus 226 -GgTpLlyAvrgnhvkcve~Ll~sGAd~--t~e~dsGy~~mdlAValGyr 272 (296)
T KOG0502|consen 226 -GGTPLLYAVRGNHVKCVESLLNSGADV--TQEDDSGYWIMDLAVALGYR 272 (296)
T ss_pred -CCceeeeeecCChHHHHHHHHhcCCCc--ccccccCCcHHHHHHHhhhH
Confidence 999999999999999999999999998 88899999999999988775
No 22
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.87 E-value=2e-21 Score=159.96 Aligned_cols=136 Identities=25% Similarity=0.269 Sum_probs=114.5
Q ss_pred hhcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCC
Q 030377 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (178)
Q Consensus 26 ~~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~ 105 (178)
.+++..|..|.||||+|+..|+.++++.|+++|++++.. +..|.||||+|+..++.+++++|+..++..+.. .
T Consensus 549 ~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~----d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~--~- 621 (823)
T PLN03192 549 LDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIR----DANGNTALWNAISAKHHKIFRILYHFASISDPH--A- 621 (823)
T ss_pred CCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCc----CCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcc--c-
Confidence 346777888889999999888888888888888888877 778888999998888888888888876655432 2
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhhcCCC
Q 030377 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAGETS 173 (178)
Q Consensus 106 ~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~~~~ 173 (178)
+.++||.|+..|+.++++.|++.|+++ +..|..|.||||+|+..+. .+++++|.+...+....
T Consensus 622 -~~~~L~~Aa~~g~~~~v~~Ll~~Gadi--n~~d~~G~TpLh~A~~~g~--~~iv~~Ll~~GAdv~~~ 684 (823)
T PLN03192 622 -AGDLLCTAAKRNDLTAMKELLKQGLNV--DSEDHQGATALQVAMAEDH--VDMVRLLIMNGADVDKA 684 (823)
T ss_pred -CchHHHHHHHhCCHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHCCc--HHHHHHHHHcCCCCCCC
Confidence 668899999999999999999999988 8899999999999998765 59999999988776543
No 23
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.87 E-value=2.7e-21 Score=155.02 Aligned_cols=139 Identities=19% Similarity=0.227 Sum_probs=119.0
Q ss_pred hhcccCCCCCCcHHHHHHHcCC--HHHHHHHHHcCCCccccccCCCCCCCcHHHHHH-----------------------
Q 030377 26 RSVIDTDDRGWTPLHIGARKGD--IKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAA----------------------- 80 (178)
Q Consensus 26 ~~~~~~~~~g~t~l~~A~~~~~--~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~----------------------- 80 (178)
.+++.+|..|.||||+|+..|+ .+++++|++.|++++.. +..|.||||+|+
T Consensus 203 ADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~k----D~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~ 278 (764)
T PHA02716 203 VNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMK----CVNGMSPIMTYIINIDNINPEITNIYIESLDGNKV 278 (764)
T ss_pred CCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCC----CCCCCCHHHHHHHhhhccCHHHHHHHHHhcccccc
Confidence 4677889999999999999995 58999999999999988 789999999753
Q ss_pred --------------hcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHH--hCCHHHHHHHHHcCCCCCCCCCCCCCCC
Q 030377 81 --------------QGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAK--ERKKEAVRFLIENGAFLPDDINDSRFNP 144 (178)
Q Consensus 81 --------------~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~--~~~~~i~~~Ll~~g~~~~~~~~~~~g~t 144 (178)
..++.+++++|++.|++++..+.. |+||||+|+. .++.+++++|++.|+++ +.+|..|.|
T Consensus 279 ~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~--G~TPLH~Aaa~~~~~~eIVklLLe~GADI--N~kD~~G~T 354 (764)
T PHA02716 279 KNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSA--GRTCLHQYILRHNISTDIIKLLHEYGNDL--NEPDNIGNT 354 (764)
T ss_pred ccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCC--CCCHHHHHHHHhCCCchHHHHHHHcCCCC--ccCCCCCCC
Confidence 346788999999999999998887 9999999875 45789999999999988 889999999
Q ss_pred cccccccc------------cccHHHHHHHHHHhhhhcCC
Q 030377 145 PLHYCPSL------------EWAYEEMMRFQRESFSAGET 172 (178)
Q Consensus 145 ~l~~a~~~------------~~~~~e~~~~l~~~~~~~~~ 172 (178)
|||+|+.. ..+..+++++|.+...+...
T Consensus 355 PLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~ 394 (764)
T PHA02716 355 VLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITA 394 (764)
T ss_pred HHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCC
Confidence 99987531 22467999999998776643
No 24
>PHA02798 ankyrin-like protein; Provisional
Probab=99.87 E-value=1.9e-21 Score=152.25 Aligned_cols=136 Identities=21% Similarity=0.344 Sum_probs=89.3
Q ss_pred hhcccCCCCCCcHHHHHHHcC---CHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCC---HHHHHHHHHcCCCCc
Q 030377 26 RSVIDTDDRGWTPLHIGARKG---DIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGH---LEVMDVLLERGADID 99 (178)
Q Consensus 26 ~~~~~~~~~g~t~l~~A~~~~---~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~---~~~~~~L~~~~~~~~ 99 (178)
.+++.+|..|+||||+|+..+ +.+++++|+++|++++.. +..|.||||+|+..++ .+++++|++.|++++
T Consensus 100 adiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~----d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin 175 (489)
T PHA02798 100 ADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLL----DKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDIN 175 (489)
T ss_pred CCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCcccc----CCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcc
Confidence 446667777788888877764 567778888888777776 6777777777777766 677777777666654
Q ss_pred cccC---------------------------------------------------------------------------C
Q 030377 100 ARTK---------------------------------------------------------------------------G 104 (178)
Q Consensus 100 ~~~~---------------------------------------------------------------------------~ 104 (178)
..+. +
T Consensus 176 ~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d 255 (489)
T PHA02798 176 THNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVD 255 (489)
T ss_pred cccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcC
Confidence 3321 1
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhh
Q 030377 105 ACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (178)
Q Consensus 105 ~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~ 169 (178)
..|.||||+|+..|+.+++++|++.|+++ +..|..|.|||+.|+..+. .++++.+.+..++
T Consensus 256 ~~G~TPL~~A~~~~~~~~v~~LL~~GAdi--n~~d~~G~TpL~~A~~~~~--~~iv~~lL~~~~~ 316 (489)
T PHA02798 256 ELGFNPLYYSVSHNNRKIFEYLLQLGGDI--NIITELGNTCLFTAFENES--KFIFNSILNKKPN 316 (489)
T ss_pred cCCccHHHHHHHcCcHHHHHHHHHcCCcc--cccCCCCCcHHHHHHHcCc--HHHHHHHHccCCC
Confidence 12666666666666666666666666665 6666666666666665443 3566665554433
No 25
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.87 E-value=6.3e-22 Score=151.56 Aligned_cols=131 Identities=40% Similarity=0.499 Sum_probs=116.5
Q ss_pred hhcccCC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCC
Q 030377 26 RSVIDTD-DRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKG 104 (178)
Q Consensus 26 ~~~~~~~-~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~ 104 (178)
.+++... .-+.||||+|++.|+..++..|+++|++++.. |.+|.+|+|.|+..++..++-+|+..+++++.+|.+
T Consensus 102 advn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~----D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~ 177 (600)
T KOG0509|consen 102 ADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLK----DKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNN 177 (600)
T ss_pred CCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCcee----cCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCC
Confidence 3455555 56789999999999999999999999999999 899999999999999999999999999999999998
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCC-CCCCCcccccccccccHHHHHHHHHHh
Q 030377 105 ACGWTPLHTAAKERKKEAVRFLIENGAFLPDDIND-SRFNPPLHYCPSLEWAYEEMMRFQRES 166 (178)
Q Consensus 105 ~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~-~~g~t~l~~a~~~~~~~~e~~~~l~~~ 166 (178)
|+|||++|+..|+...+..|+..|+.+ ...| .+|.||||.|+..|+. .++.++.+.
T Consensus 178 --grTpLmwAaykg~~~~v~~LL~f~a~~--~~~d~~~g~TpLHwa~~~gN~--~~v~Ll~~g 234 (600)
T KOG0509|consen 178 --GRTPLMWAAYKGFALFVRRLLKFGASL--LLTDDNHGNTPLHWAVVGGNL--TAVKLLLEG 234 (600)
T ss_pred --CCCHHHHHHHhcccHHHHHHHHhcccc--cccccccCCchHHHHHhcCCc--ceEehhhhc
Confidence 999999999999988899999999977 6666 9999999999987765 666655544
No 26
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.87 E-value=1.1e-21 Score=131.34 Aligned_cols=133 Identities=24% Similarity=0.300 Sum_probs=105.6
Q ss_pred hcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-----ccccccCCCCCCCcHHHHHHhcCCH---HHHHHHHHcCCCC
Q 030377 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMD-----VNVAAWGPKSKGVTPLHLAAQGGHL---EVMDVLLERGADI 98 (178)
Q Consensus 27 ~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~-----~~~~~~~~~~~~~t~l~~a~~~~~~---~~~~~L~~~~~~~ 98 (178)
....+|..|.||||+|++.|+...+........+ +... +..|.||||+|+..++. +++++|+..|+++
T Consensus 9 ~~~~~d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~----d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadi 84 (154)
T PHA02736 9 FASEPDIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEY----NRHGKQCVHIVSNPDKADPQEKLKLLMEWGADI 84 (154)
T ss_pred HHHhcCCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHh----cCCCCEEEEeecccCchhHHHHHHHHHHcCCCc
Confidence 3567888999999999999984322221111112 1222 67899999999999876 4689999999999
Q ss_pred ccccC-CCCCCcHHHHHHHhCCHHHHHHHHHc-CCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhh
Q 030377 99 DARTK-GACGWTPLHTAAKERKKEAVRFLIEN-GAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (178)
Q Consensus 99 ~~~~~-~~~g~t~l~~a~~~~~~~i~~~Ll~~-g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~ 169 (178)
+..+. . |+||||+|+..++.+++++|+.. |+++ +..|..|.||||+|+..+. .+++++|.+...+
T Consensus 85 n~~~~~~--g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~--n~~~~~g~tpL~~A~~~~~--~~i~~~Ll~~ga~ 151 (154)
T PHA02736 85 NGKERVF--GNTPLHIAVYTQNYELATWLCNQPGVNM--EILNYAFKTPYYVACERHD--AKMMNILRAKGAQ 151 (154)
T ss_pred cccCCCC--CCcHHHHHHHhCCHHHHHHHHhCCCCCC--ccccCCCCCHHHHHHHcCC--HHHHHHHHHcCCC
Confidence 98763 6 99999999999999999999984 8877 8889999999999997765 4999999876544
No 27
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.86 E-value=6.5e-21 Score=133.58 Aligned_cols=130 Identities=22% Similarity=0.213 Sum_probs=110.9
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcC--CHHHHHHHHHcCCCCccccC-CCCCC
Q 030377 32 DDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGG--HLEVMDVLLERGADIDARTK-GACGW 108 (178)
Q Consensus 32 ~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~--~~~~~~~L~~~~~~~~~~~~-~~~g~ 108 (178)
.+.+++||++|+..|+.+.++.|+..+ +.. +..|.||||+|+..+ +.+++++|++.|++++..+. . |.
T Consensus 18 ~~~~~~pL~~A~~~~~~~~vk~Li~~~---n~~----~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~--g~ 88 (209)
T PHA02859 18 FYRYCNPLFYYVEKDDIEGVKKWIKFV---NDC----NDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDN--NL 88 (209)
T ss_pred hhccCcHHHHHHHhCcHHHHHHHHHhh---hcc----CccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCC--CC
Confidence 567799999999999999999999763 333 678999999999854 89999999999999998763 5 99
Q ss_pred cHHHHHHHh---CCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhhcCC
Q 030377 109 TPLHTAAKE---RKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAGET 172 (178)
Q Consensus 109 t~l~~a~~~---~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~~~ 172 (178)
||||+|+.. ++.+++++|+++|+++ +..|..|.||||+|+....+..+++++|.+...+...
T Consensus 89 TpLh~a~~~~~~~~~eiv~~Ll~~gadi--n~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~ 153 (209)
T PHA02859 89 SALHHYLSFNKNVEPEILKILIDSGSSI--TEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLN 153 (209)
T ss_pred CHHHHHHHhCccccHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccc
Confidence 999998754 4799999999999988 8899999999999876544557999999988776543
No 28
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.86 E-value=2.4e-21 Score=136.51 Aligned_cols=137 Identities=31% Similarity=0.433 Sum_probs=118.5
Q ss_pred hhhhcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccC
Q 030377 24 FFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTK 103 (178)
Q Consensus 24 ~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~ 103 (178)
--.+++.-|..|.+|||+||..|+..+++.|+.+|+.+|.. +-...||||+|+..|+.++|..|+++.+++|..+.
T Consensus 23 tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~t----nmgddtplhlaaahghrdivqkll~~kadvnavne 98 (448)
T KOG0195|consen 23 TEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNST----NMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNE 98 (448)
T ss_pred cccccccccccCcchhhhhhhcccHHHHHHHHhcccccccc----cCCCCcchhhhhhcccHHHHHHHHHHhcccchhhc
Confidence 34567788999999999999999999999999999999988 66777999999999999999999999999999998
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhhc
Q 030377 104 GACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAG 170 (178)
Q Consensus 104 ~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~ 170 (178)
. |.|||||||..|..++++-|+..|+-+ ++-|..|.||+..|... ...-+.+...+...++
T Consensus 99 h--gntplhyacfwgydqiaedli~~ga~v--~icnk~g~tpldkakp~--l~~~l~e~aek~gq~~ 159 (448)
T KOG0195|consen 99 H--GNTPLHYACFWGYDQIAEDLISCGAAV--NICNKKGMTPLDKAKPM--LKNTLLEIAEKHGQSP 159 (448)
T ss_pred c--CCCchhhhhhhcHHHHHHHHHhcccee--eecccCCCCchhhhchH--HHHHHHHHHHHhCCCC
Confidence 8 999999999999999999999999988 88999999999988532 2233444444444433
No 29
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.86 E-value=1.2e-21 Score=145.61 Aligned_cols=129 Identities=30% Similarity=0.454 Sum_probs=116.2
Q ss_pred hhcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCC
Q 030377 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (178)
Q Consensus 26 ~~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~ 105 (178)
.+++.....+.|||-.||.-|+.+++++|+++|+|++.. +..|.|+||+|+..|+.+|+++|++.|++++..+..
T Consensus 108 a~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~Ia----nrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~k- 182 (615)
T KOG0508|consen 108 ASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIA----NRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYK- 182 (615)
T ss_pred CccccccccCCccHHHHHhcchhHHHHHHHHcCCCCccc----ccCCCeeEEeeeccCchHHHHHHHHhCCCcchhccc-
Confidence 567777777889999999999999999999999999998 899999999999999999999999999999998877
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHH
Q 030377 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRE 165 (178)
Q Consensus 106 ~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~ 165 (178)
|+|+||.|..+|+.+++++|+..|+.++ .|..|-|||..|+..|.. +++.+|.+
T Consensus 183 -GNTALH~caEsG~vdivq~Ll~~ga~i~---~d~~GmtPL~~Aa~tG~~--~iVe~L~~ 236 (615)
T KOG0508|consen 183 -GNTALHDCAESGSVDIVQLLLKHGAKID---VDGHGMTPLLLAAVTGHT--DIVERLLQ 236 (615)
T ss_pred -CchHHHhhhhcccHHHHHHHHhCCceee---ecCCCCchHHHHhhhcch--HHHHHHhc
Confidence 9999999999999999999999999653 366799999999887765 88888875
No 30
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.86 E-value=6e-21 Score=149.56 Aligned_cols=132 Identities=21% Similarity=0.303 Sum_probs=83.8
Q ss_pred ccCCCCCCcHHHHHHHc--CCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcC----CHHHHHHHHHcCCCCcccc
Q 030377 29 IDTDDRGWTPLHIGARK--GDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGG----HLEVMDVLLERGADIDART 102 (178)
Q Consensus 29 ~~~~~~g~t~l~~A~~~--~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~----~~~~~~~L~~~~~~~~~~~ 102 (178)
..+|..|+||||+|+.. ++.+++++|++.|++++... +..|.||||+|+..+ +.+++++|++.|++++..+
T Consensus 139 ~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~---~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~ 215 (494)
T PHA02989 139 DVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKT---SLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNN 215 (494)
T ss_pred cccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccc---cccCCChHHHHHhcccccccHHHHHHHHhCCCCccccC
Confidence 34455666666665543 35566666666666655421 445666666665433 5666666666666554332
Q ss_pred ------------------------------------CCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 030377 103 ------------------------------------KGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 146 (178)
Q Consensus 103 ------------------------------------~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l 146 (178)
++..|+||||+|+..|+.+++++|++.|+++ +..|..|.|||
T Consensus 216 ~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadi--n~~d~~G~TpL 293 (494)
T PHA02989 216 NGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDI--YNVSKDGDTVL 293 (494)
T ss_pred CccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCc--cccCCCCCCHH
Confidence 1223778888888888888888888888877 77777888888
Q ss_pred cccccccccHHHHHHHHHHhh
Q 030377 147 HYCPSLEWAYEEMMRFQRESF 167 (178)
Q Consensus 147 ~~a~~~~~~~~e~~~~l~~~~ 167 (178)
|+|+..+. .+++++|.+..
T Consensus 294 ~~A~~~~~--~~iv~~LL~~~ 312 (494)
T PHA02989 294 TYAIKHGN--IDMLNRILQLK 312 (494)
T ss_pred HHHHHcCC--HHHHHHHHhcC
Confidence 88876654 47777776654
No 31
>PHA03095 ankyrin-like protein; Provisional
Probab=99.86 E-value=1.5e-20 Score=146.49 Aligned_cols=138 Identities=30% Similarity=0.386 Sum_probs=113.7
Q ss_pred hhcccCCCCCCcHHHHHHHcC-CHHHHHHHHHcCCCccccccCCCCCCCcHHHHHH--hcCCHHHHHHHHHcCCCCcccc
Q 030377 26 RSVIDTDDRGWTPLHIGARKG-DIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAA--QGGHLEVMDVLLERGADIDART 102 (178)
Q Consensus 26 ~~~~~~~~~g~t~l~~A~~~~-~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~--~~~~~~~~~~L~~~~~~~~~~~ 102 (178)
.+++.++..|.||||+|+..+ ..+++++|++.|++++.. +..|.||||+|+ ..++.+++++|++.|++++..+
T Consensus 74 adin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~----~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d 149 (471)
T PHA03095 74 ADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAK----DKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALD 149 (471)
T ss_pred CCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCC----CCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccC
Confidence 456778889999999999999 599999999999999987 788999999999 4567899999999999999887
Q ss_pred CCCCCCcHHHHHHHhC--CHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhhcC
Q 030377 103 KGACGWTPLHTAAKER--KKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAGE 171 (178)
Q Consensus 103 ~~~~g~t~l~~a~~~~--~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~~ 171 (178)
.. |.||||+|+..+ +.+++++|++.|+++ ...|..|.||||+++.......+++++|.+...++.
T Consensus 150 ~~--g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~--~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~ 216 (471)
T PHA03095 150 LY--GMTPLAVLLKSRNANVELLRLLIDAGADV--YAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPA 216 (471)
T ss_pred CC--CCCHHHHHHHcCCCCHHHHHHHHHcCCCC--cccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCc
Confidence 77 899999988765 578889999988877 555888888888887655555677777766555443
No 32
>PHA02946 ankyin-like protein; Provisional
Probab=99.85 E-value=1.1e-20 Score=145.86 Aligned_cols=126 Identities=13% Similarity=0.238 Sum_probs=93.1
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCC--HHHHHHHHHcCCCCccccCCCCCCc
Q 030377 32 DDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGH--LEVMDVLLERGADIDARTKGACGWT 109 (178)
Q Consensus 32 ~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~--~~~~~~L~~~~~~~~~~~~~~~g~t 109 (178)
|..|.|||| |+..+..++++.|++.|++++.. +..|+||||+|+..++ .+++++|++.|++++..+.+ |.|
T Consensus 138 d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~----d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~--G~T 210 (446)
T PHA02946 138 DEEGCGPLL-ACTDPSERVFKKIMSIGFEARIV----DKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHD--GNT 210 (446)
T ss_pred CCCCCcHHH-HHHCCChHHHHHHHhcccccccc----CCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCC--CCC
Confidence 334444443 33334444445555555444444 5678888888877544 68899999999999998887 999
Q ss_pred HHHHHHHhC--CHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhh
Q 030377 110 PLHTAAKER--KKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (178)
Q Consensus 110 ~l~~a~~~~--~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~ 168 (178)
|||+|+..+ +.+++++|+. |+++ +.+|..|.||||+|+..+. ..+++++|.+...
T Consensus 211 pLH~Aa~~~~~~~~iv~lLl~-gadi--n~~d~~G~TpLh~A~~~~~-~~~~~~~Ll~~g~ 267 (446)
T PHA02946 211 PLHIVCSKTVKNVDIINLLLP-STDV--NKQNKFGDSPLTLLIKTLS-PAHLINKLLSTSN 267 (446)
T ss_pred HHHHHHHcCCCcHHHHHHHHc-CCCC--CCCCCCCCCHHHHHHHhCC-hHHHHHHHHhCCC
Confidence 999999886 7899999985 8877 8899999999999987644 2588888887653
No 33
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.85 E-value=3.3e-21 Score=143.36 Aligned_cols=127 Identities=28% Similarity=0.424 Sum_probs=117.6
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHH
Q 030377 33 DRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLH 112 (178)
Q Consensus 33 ~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~ 112 (178)
-.|-+||-.|+..|+.++|+.|+++|+++|.. .....|||..||.-|+.+++++|+.+|+++++.++. |.|.|+
T Consensus 82 IegappLWaAsaAGHl~vVk~L~~~ga~VN~t----T~TNStPLraACfDG~leivKyLvE~gad~~Ianrh--GhTcLm 155 (615)
T KOG0508|consen 82 IEGAPPLWAASAAGHLEVVKLLLRRGASVNDT----TRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRH--GHTCLM 155 (615)
T ss_pred cCCCchhhHHhccCcHHHHHHHHHhcCccccc----cccCCccHHHHHhcchhHHHHHHHHcCCCCcccccC--CCeeEE
Confidence 35668999999999999999999999999977 567779999999999999999999999999999888 999999
Q ss_pred HHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhh
Q 030377 113 TAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (178)
Q Consensus 113 ~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~ 169 (178)
+||..|+.+|+++|++.|+|+ +..+..|+|+||-|+..|.. +++++|...+..
T Consensus 156 Ia~ykGh~~I~qyLle~gADv--n~ks~kGNTALH~caEsG~v--divq~Ll~~ga~ 208 (615)
T KOG0508|consen 156 IACYKGHVDIAQYLLEQGADV--NAKSYKGNTALHDCAESGSV--DIVQLLLKHGAK 208 (615)
T ss_pred eeeccCchHHHHHHHHhCCCc--chhcccCchHHHhhhhcccH--HHHHHHHhCCce
Confidence 999999999999999999999 88999999999999988776 999999986543
No 34
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.85 E-value=4.9e-20 Score=149.48 Aligned_cols=134 Identities=28% Similarity=0.350 Sum_probs=69.5
Q ss_pred cccCCCCCCcHHHHHHHc-CCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCC
Q 030377 28 VIDTDDRGWTPLHIGARK-GDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGAC 106 (178)
Q Consensus 28 ~~~~~~~g~t~l~~A~~~-~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~ 106 (178)
++..|..|.||||+|+.. +..+++..|++.|++++.. +..|.||||+|+..++.+++++|+..|++++..+..
T Consensus 334 in~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~----d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~-- 407 (682)
T PHA02876 334 VNAADRLYITPLHQASTLDRNKDIVITLLELGANVNAR----DYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQK-- 407 (682)
T ss_pred CCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccC----CCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCC--
Confidence 333444445555555443 2344455555555555544 455555555555555555555555555555554444
Q ss_pred CCcHHHHHHHhCC-HHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhhc
Q 030377 107 GWTPLHTAAKERK-KEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAG 170 (178)
Q Consensus 107 g~t~l~~a~~~~~-~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~ 170 (178)
|.||||+|+..++ ..++++|++.|+++ +.+|..|.||||+|+..+. ..+++++|.+...+.
T Consensus 408 g~T~Lh~A~~~~~~~~~vk~Ll~~gadi--n~~d~~G~TpLh~Aa~~~~-~~~iv~lLl~~Gad~ 469 (682)
T PHA02876 408 IGTALHFALCGTNPYMSVKTLIDRGANV--NSKNKDLSTPLHYACKKNC-KLDVIEMLLDNGADV 469 (682)
T ss_pred CCchHHHHHHcCCHHHHHHHHHhCCCCC--CcCCCCCChHHHHHHHhCC-cHHHHHHHHHCCCCC
Confidence 5555555554333 33455555555554 5556666666666654321 235666666555444
No 35
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.85 E-value=3e-20 Score=145.66 Aligned_cols=141 Identities=18% Similarity=0.261 Sum_probs=115.7
Q ss_pred hhhcccCCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCc-cccccCCCCCCCcHHHHHHhc--CCHHHHHHHHHcCCCC
Q 030377 25 FRSVIDTDDRGWTPLHIGARK---GDIKLVKQLLDEGMDV-NVAAWGPKSKGVTPLHLAAQG--GHLEVMDVLLERGADI 98 (178)
Q Consensus 25 ~~~~~~~~~~g~t~l~~A~~~---~~~~~v~~ll~~~~~~-~~~~~~~~~~~~t~l~~a~~~--~~~~~~~~L~~~~~~~ 98 (178)
..+++.+|..|.||||.|+.. ++.+++++|+++|+++ +.. +..|.||||+|+.. ++.+++++|++.|+++
T Consensus 98 Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~----d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi 173 (494)
T PHA02989 98 GADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVK----NSRGYNLLHMYLESFSVKKDVIKILLSFGVNL 173 (494)
T ss_pred CCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCccccc----CCCCCCHHHHHHHhccCCHHHHHHHHHcCCCc
Confidence 356778899999999988765 6789999999999999 666 78899999998764 5789999999999999
Q ss_pred cc-ccCCCCCCcHHHHHHHhC----CHHHHHHHHHcCCCCCC------------------------------------CC
Q 030377 99 DA-RTKGACGWTPLHTAAKER----KKEAVRFLIENGAFLPD------------------------------------DI 137 (178)
Q Consensus 99 ~~-~~~~~~g~t~l~~a~~~~----~~~i~~~Ll~~g~~~~~------------------------------------~~ 137 (178)
+. .+.. |.||||+|+..+ +.+++++|+++|++++. +.
T Consensus 174 ~~~~~~~--g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~ 251 (494)
T PHA02989 174 FEKTSLY--GLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINK 251 (494)
T ss_pred ccccccc--CCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCC
Confidence 87 3444 999999997754 89999999999987631 34
Q ss_pred CCCCCCCcccccccccccHHHHHHHHHHhhhhcCCC
Q 030377 138 NDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAGETS 173 (178)
Q Consensus 138 ~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~~~~ 173 (178)
+|..|.||||+|+..+. .+++++|.+...++...
T Consensus 252 ~d~~G~TpL~~Aa~~~~--~~~v~~LL~~Gadin~~ 285 (494)
T PHA02989 252 KDKKGFNPLLISAKVDN--YEAFNYLLKLGDDIYNV 285 (494)
T ss_pred CCCCCCCHHHHHHHhcC--HHHHHHHHHcCCCcccc
Confidence 56679999999987655 59999999887776543
No 36
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.84 E-value=2.2e-20 Score=122.37 Aligned_cols=110 Identities=35% Similarity=0.514 Sum_probs=74.3
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCC-ccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHH
Q 030377 38 PLHIGARKGDIKLVKQLLDEGMD-VNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAK 116 (178)
Q Consensus 38 ~l~~A~~~~~~~~v~~ll~~~~~-~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~ 116 (178)
.+.+|+..+....|+.|++..++ +|.+ +..++||||.|+..++.+|+..|+..|++++.++.. ||||||.||.
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtr----D~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~--GWTPLhSAck 139 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTR----DEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNE--GWTPLHSACK 139 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhcccccccc----ccccccHHHHHHhcCchHHHHHHHHccCCccccccc--Cccchhhhhc
Confidence 35667777777777777766544 4444 666777777777777777777777777777776666 7777777777
Q ss_pred hCCHHHHHHHHHcCCCCCCCCCCCCCCCccccccccccc
Q 030377 117 ERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWA 155 (178)
Q Consensus 117 ~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~ 155 (178)
.++.+|+..|++.|+|+ +.......||||.|+...+.
T Consensus 140 WnN~~va~~LLqhgaDV--nA~t~g~ltpLhlaa~~rn~ 176 (228)
T KOG0512|consen 140 WNNFEVAGRLLQHGADV--NAQTKGLLTPLHLAAGNRNS 176 (228)
T ss_pred ccchhHHHHHHhccCcc--cccccccchhhHHhhcccch
Confidence 77777777777777766 55555556777777655544
No 37
>PHA02795 ankyrin-like protein; Provisional
Probab=99.84 E-value=4e-20 Score=139.98 Aligned_cols=131 Identities=19% Similarity=0.090 Sum_probs=94.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCccccc-c-CCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHH
Q 030377 36 WTPLHIGARKGDIKLVKQLLDEGMDVNVAA-W-GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHT 113 (178)
Q Consensus 36 ~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~-~-~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~ 113 (178)
.||+|.|+..++.+++++|+++|++..-.. . ..+..+.+++|.|...++.+++++|+++|++++..+.. |.||||+
T Consensus 150 ~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~--G~TpLh~ 227 (437)
T PHA02795 150 LNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAG--GRTLLYR 227 (437)
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCC--CCCHHHH
Confidence 445555555555555555555543211100 0 00122556777777777788888888888888888777 9999999
Q ss_pred HHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccc------cHHHHHHHHHHhhhhc
Q 030377 114 AAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEW------AYEEMMRFQRESFSAG 170 (178)
Q Consensus 114 a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~------~~~e~~~~l~~~~~~~ 170 (178)
|+..|+.+++++|++.|+++ +.+|..|.||||+|+..|. ...+++++|.+..+..
T Consensus 228 Aa~~g~~eiVelLL~~GAdI--N~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI 288 (437)
T PHA02795 228 AIYAGYIDLVSWLLENGANV--NAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSI 288 (437)
T ss_pred HHHcCCHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCC
Confidence 99999999999999999988 8889999999999997764 2568999998765543
No 38
>PHA02798 ankyrin-like protein; Provisional
Probab=99.84 E-value=3.9e-20 Score=144.87 Aligned_cols=138 Identities=24% Similarity=0.333 Sum_probs=112.1
Q ss_pred hhcccCCCCCCcHHHHHHHc-----CCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcC---CHHHHHHHHHcCCC
Q 030377 26 RSVIDTDDRGWTPLHIGARK-----GDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGG---HLEVMDVLLERGAD 97 (178)
Q Consensus 26 ~~~~~~~~~g~t~l~~A~~~-----~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~---~~~~~~~L~~~~~~ 97 (178)
.+++.+|..|.||||.|+.. +..+++++|++.|++++.. +..|.||||+|+..+ +.+++++|+++|++
T Consensus 62 advn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~----d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gad 137 (489)
T PHA02798 62 ANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKK----NSDGETPLYCLLSNGYINNLEILLFMIENGAD 137 (489)
T ss_pred CCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCC----CCCcCcHHHHHHHcCCcChHHHHHHHHHcCCC
Confidence 45677888999999988754 5689999999999999987 788999999998875 67899999999999
Q ss_pred CccccCCCCCCcHHHHHHHhCC---HHHHHHHHHcCCCCCCCCC-CCCCCCcccccccc--cccHHHHHHHHHHhhhhcC
Q 030377 98 IDARTKGACGWTPLHTAAKERK---KEAVRFLIENGAFLPDDIN-DSRFNPPLHYCPSL--EWAYEEMMRFQRESFSAGE 171 (178)
Q Consensus 98 ~~~~~~~~~g~t~l~~a~~~~~---~~i~~~Ll~~g~~~~~~~~-~~~g~t~l~~a~~~--~~~~~e~~~~l~~~~~~~~ 171 (178)
++..+.. |.||||+|+..++ .+++++|++.|+++ +.. +..|.||+|.+... .....+++++|.++.....
T Consensus 138 vn~~d~~--g~tpL~~a~~~~~~~~~~vv~~Ll~~gadi--n~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~ 213 (489)
T PHA02798 138 TTLLDKD--GFTMLQVYLQSNHHIDIEIIKLLLEKGVDI--NTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIIN 213 (489)
T ss_pred ccccCCC--CCcHHHHHHHcCCcchHHHHHHHHHhCCCc--ccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcc
Confidence 9988877 9999999999887 89999999999987 555 45678999987642 2235688999888765443
No 39
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.84 E-value=9.2e-21 Score=136.92 Aligned_cols=138 Identities=26% Similarity=0.342 Sum_probs=111.9
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCccccccC----------------------------------CCCCC
Q 030377 28 VIDTDDRGWTPLHIGARKGDIKLVKQLLDEG-MDVNVAAWG----------------------------------PKSKG 72 (178)
Q Consensus 28 ~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~-~~~~~~~~~----------------------------------~~~~~ 72 (178)
++.-|.+|+|+||||+.++++++|+.|++.| ++++..... ....|
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~g 340 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHG 340 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhc
Confidence 5668999999999999999999999999987 555544210 02248
Q ss_pred CcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccc
Q 030377 73 VTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSL 152 (178)
Q Consensus 73 ~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~ 152 (178)
.|+|++|+.+|+.++++.|+.+|+++|.+|.+ |.|+|++|+.+|+.||+++|+.... .+...+|..|.|+|.+|...
T Consensus 341 QTALMLAVSHGr~d~vk~LLacgAdVNiQDdD--GSTALMCA~EHGhkEivklLLA~p~-cd~sLtD~DgSTAl~IAlea 417 (452)
T KOG0514|consen 341 QTALMLAVSHGRVDMVKALLACGADVNIQDDD--GSTALMCAAEHGHKEIVKLLLAVPS-CDISLTDVDGSTALSIALEA 417 (452)
T ss_pred chhhhhhhhcCcHHHHHHHHHccCCCccccCC--ccHHHhhhhhhChHHHHHHHhccCc-ccceeecCCCchhhhhHHhc
Confidence 89999999999999999999999999999999 9999999999999999999997733 23488899999999999888
Q ss_pred cccHHHHHHHHHHhhhhc
Q 030377 153 EWAYEEMMRFQRESFSAG 170 (178)
Q Consensus 153 ~~~~~e~~~~l~~~~~~~ 170 (178)
|+- ||--+|..+..-.
T Consensus 418 gh~--eIa~mlYa~~n~~ 433 (452)
T KOG0514|consen 418 GHR--EIAVMLYAHMNIK 433 (452)
T ss_pred Cch--HHHHHHHHHHHhh
Confidence 775 6655555444333
No 40
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.83 E-value=1.5e-19 Score=122.35 Aligned_cols=109 Identities=27% Similarity=0.255 Sum_probs=96.2
Q ss_pred hcccCCCCCCcHHHHHHHcCCHHH---HHHHHHcCCCccccccCCC-CCCCcHHHHHHhcCCHHHHHHHHH-cCCCCccc
Q 030377 27 SVIDTDDRGWTPLHIGARKGDIKL---VKQLLDEGMDVNVAAWGPK-SKGVTPLHLAAQGGHLEVMDVLLE-RGADIDAR 101 (178)
Q Consensus 27 ~~~~~~~~g~t~l~~A~~~~~~~~---v~~ll~~~~~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~L~~-~~~~~~~~ 101 (178)
.+..+|..|+||||+|+..|..+. +++|+..|++++.. + ..|.||||+|+..++.+++++|+. .|++++..
T Consensus 49 ~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~----d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~ 124 (166)
T PHA02743 49 LLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINAR----ELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAI 124 (166)
T ss_pred hhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCC----CCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCc
Confidence 456678999999999999988654 89999999999987 5 579999999999999999999995 79999988
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 030377 102 TKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFN 143 (178)
Q Consensus 102 ~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~ 143 (178)
+.. |.||||+|+..++.+++++|+++|+++ +.++..|.
T Consensus 125 d~~--g~tpL~~A~~~~~~~iv~~Ll~~ga~~--~~~~~~~~ 162 (166)
T PHA02743 125 NYQ--HETAYHIAYKMRDRRMMEILRANGAVC--DDPLSIGL 162 (166)
T ss_pred CCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CCcccCCc
Confidence 877 999999999999999999999999988 55555553
No 41
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.83 E-value=3.2e-20 Score=145.61 Aligned_cols=138 Identities=30% Similarity=0.383 Sum_probs=116.6
Q ss_pred hcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCC
Q 030377 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGAC 106 (178)
Q Consensus 27 ~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~ 106 (178)
.++..|.+|.||||+||+.|..+.+..|+..|++++.+ +..+.||||.|+++|+..+++-|++..........+..
T Consensus 265 lv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~k----n~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~ 340 (929)
T KOG0510|consen 265 LVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSK----NKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLH 340 (929)
T ss_pred HhhcccccCCchHHHHHHcCChhHHHHHHHcCCccccc----CCCCCCchHHHHHcccHHHHHHHHhCcCcccccccccc
Confidence 35778999999999999999999999999999999988 88999999999999999999999993222223333444
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCCCCcccccccccccHHHHHHHHHHhhhhc
Q 030377 107 GWTPLHTAAKERKKEAVRFLIENGAFLPD-DINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAG 170 (178)
Q Consensus 107 g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~-~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~ 170 (178)
|.||||.|+.+|+..++++|+..|+.... ...|..|.||||.|+..|+. ..++.|.....+.
T Consensus 341 g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~--~av~~Li~~Ga~I 403 (929)
T KOG0510|consen 341 GMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNT--SAVQKLISHGADI 403 (929)
T ss_pred CCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccH--HHHHHHHHcCCce
Confidence 99999999999999999999999997621 14589999999999988764 8888888776655
No 42
>PHA02730 ankyrin-like protein; Provisional
Probab=99.83 E-value=9.1e-20 Score=144.09 Aligned_cols=160 Identities=15% Similarity=0.095 Sum_probs=121.8
Q ss_pred hhhhhhccCCcch---hhhhhhHHhhhhhcccCCCCCCcHHHHHHHcCC----HHHHHHHHHcCC--CccccccCCCCCC
Q 030377 2 IESMVHEQLGPFT---LQRKASRKRFFRSVIDTDDRGWTPLHIGARKGD----IKLVKQLLDEGM--DVNVAAWGPKSKG 72 (178)
Q Consensus 2 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~----~~~v~~ll~~~~--~~~~~~~~~~~~~ 72 (178)
+|.+++.+.+... .-.-..+-....+++.. ..|.||||+|+..++ .+++++|+++|+ +++.. +..|
T Consensus 343 ~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~k----d~~G 417 (672)
T PHA02730 343 VQAMLINYLHYGDMVSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHV----SNNG 417 (672)
T ss_pred HHHHHHHHHhcCCcCcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCcccccc----ccCC
Confidence 4555666654331 11111122234556654 789999999998875 899999999997 57766 7789
Q ss_pred CcHHHH---HHhcC---------CHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCC
Q 030377 73 VTPLHL---AAQGG---------HLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDS 140 (178)
Q Consensus 73 ~t~l~~---a~~~~---------~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~ 140 (178)
.||||. +...+ ..+++++|+.+|++++..+.. |.||||+|+..++.+++++|++.|+++ +..+.
T Consensus 418 ~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~--G~TPLh~Aa~~~~~eive~LI~~GAdI--N~~d~ 493 (672)
T PHA02730 418 RLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNE--NKTLLYYAVDVNNIQFARRLLEYGASV--NTTSR 493 (672)
T ss_pred CchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhccCCC--CCCHHHHHHHhCCHHHHHHHHHCCCCC--CCCCC
Confidence 999984 33222 235699999999999999888 999999999999999999999999988 77786
Q ss_pred -CCCCcccccccccccHHHHHHHHHHhhhhc
Q 030377 141 -RFNPPLHYCPSLEWAYEEMMRFQRESFSAG 170 (178)
Q Consensus 141 -~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~ 170 (178)
.|.||+|+|+..+....+++++|.++.+..
T Consensus 494 ~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i 524 (672)
T PHA02730 494 SIINTAIQKSSYRRENKTKLVDLLLSYHPTL 524 (672)
T ss_pred cCCcCHHHHHHHhhcCcHHHHHHHHHcCCCH
Confidence 589999999865444579999999877654
No 43
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.83 E-value=7e-20 Score=120.05 Aligned_cols=125 Identities=30% Similarity=0.450 Sum_probs=107.2
Q ss_pred HHhhhhhcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCcc
Q 030377 21 RKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDA 100 (178)
Q Consensus 21 ~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~ 100 (178)
+++-..-++.+|.+|.||||-|++.|+.+++..|+..|++++.+ ...||||||-||...+.+++.+|+++|++++.
T Consensus 83 L~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~----T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA 158 (228)
T KOG0512|consen 83 LSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAK----TNEGWTPLHSACKWNNFEVAGRLLQHGADVNA 158 (228)
T ss_pred HHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccc----cccCccchhhhhcccchhHHHHHHhccCcccc
Confidence 34445568889999999999999999999999999999999988 78999999999999999999999999999999
Q ss_pred ccCCCCCCcHHHHHHHhCCHHH-HHHHHHcCCCCCCCCCCCCCCCcccccccc
Q 030377 101 RTKGACGWTPLHTAAKERKKEA-VRFLIENGAFLPDDINDSRFNPPLHYCPSL 152 (178)
Q Consensus 101 ~~~~~~g~t~l~~a~~~~~~~i-~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~ 152 (178)
.... ..||||.|+...+... +.+|+.... +.....+..+.||+.+|.+-
T Consensus 159 ~t~g--~ltpLhlaa~~rn~r~t~~~Ll~dry-i~pg~~nn~eeta~~iARRT 208 (228)
T KOG0512|consen 159 QTKG--LLTPLHLAAGNRNSRDTLELLLHDRY-IHPGLKNNLEETAFDIARRT 208 (228)
T ss_pred cccc--cchhhHHhhcccchHHHHHHHhhccc-cChhhhcCccchHHHHHHHh
Confidence 9887 8899999998776555 455554433 44477788899999999754
No 44
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.83 E-value=2.3e-19 Score=109.32 Aligned_cols=85 Identities=47% Similarity=0.785 Sum_probs=77.7
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhC
Q 030377 39 LHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKER 118 (178)
Q Consensus 39 l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~ 118 (178)
||+|++.|+.+++++|++.+.+++. |.||||+|+..++.+++++|++.|++++..+.. |+||||+|+..|
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~--------~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~ 70 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL--------GNTALHYAAENGNLEIVKLLLENGADINSQDKN--GNTALHYAAENG 70 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS--------SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTT--SSBHHHHHHHTT
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC--------CCCHHHHHHHcCCHHHHHHHHHhcccccccCCC--CCCHHHHHHHcC
Confidence 7999999999999999998876652 779999999999999999999999999998877 999999999999
Q ss_pred CHHHHHHHHHcCCCC
Q 030377 119 KKEAVRFLIENGAFL 133 (178)
Q Consensus 119 ~~~i~~~Ll~~g~~~ 133 (178)
+.+++++|+++|+++
T Consensus 71 ~~~~~~~Ll~~g~~~ 85 (89)
T PF12796_consen 71 NLEIVKLLLEHGADV 85 (89)
T ss_dssp HHHHHHHHHHTTT-T
T ss_pred CHHHHHHHHHcCCCC
Confidence 999999999999987
No 45
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.82 E-value=2.5e-19 Score=145.42 Aligned_cols=136 Identities=26% Similarity=0.314 Sum_probs=102.2
Q ss_pred hcccCCCCCCcHHHHHHHcC-CHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhc-CCHHHHHHHHHcCCCCccccCC
Q 030377 27 SVIDTDDRGWTPLHIGARKG-DIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQG-GHLEVMDVLLERGADIDARTKG 104 (178)
Q Consensus 27 ~~~~~~~~g~t~l~~A~~~~-~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~-~~~~~~~~L~~~~~~~~~~~~~ 104 (178)
+++.+|..|.||||+|+..| ..+.++.|+..|++++.. +..|.||||+|+.. ++.+++.+|+..|++++..+..
T Consensus 299 din~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~----d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~ 374 (682)
T PHA02876 299 DVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAA----DRLYITPLHQASTLDRNKDIVITLLELGANVNARDYC 374 (682)
T ss_pred CCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCc----ccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCC
Confidence 45556777888888888777 577788888888877776 67778888888775 4567778888888888877766
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhhcC
Q 030377 105 ACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAGE 171 (178)
Q Consensus 105 ~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~~ 171 (178)
|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..+. ..+++++|.+...+..
T Consensus 375 --G~TpLh~Aa~~~~~~iv~~Ll~~gad~--~~~~~~g~T~Lh~A~~~~~-~~~~vk~Ll~~gadin 436 (682)
T PHA02876 375 --DKTPIHYAAVRNNVVIINTLLDYGADI--EALSQKIGTALHFALCGTN-PYMSVKTLIDRGANVN 436 (682)
T ss_pred --CCCHHHHHHHcCCHHHHHHHHHCCCCc--cccCCCCCchHHHHHHcCC-HHHHHHHHHhCCCCCC
Confidence 888888888888888888888888877 6677788888888875443 3466777777665543
No 46
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.82 E-value=7.6e-20 Score=150.07 Aligned_cols=156 Identities=28% Similarity=0.561 Sum_probs=125.8
Q ss_pred hhhhccCCcchhhhhhhHHhhhhhccc-------CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHH
Q 030377 4 SMVHEQLGPFTLQRKASRKRFFRSVID-------TDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPL 76 (178)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l 76 (178)
....+.++|+.+.+-.........+.. ..+.+.+++|.|...+....++.+++.|++.+.+ +..++|||
T Consensus 469 ~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~----~~r~~TpL 544 (1143)
T KOG4177|consen 469 AVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLR----TGRGYTPL 544 (1143)
T ss_pred hhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehh----cccccchH
Confidence 344555566666655554443333322 2356667777777777777777777777777766 67899999
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccH
Q 030377 77 HLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAY 156 (178)
Q Consensus 77 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~ 156 (178)
|.|+..|+.++|++|+++|++++..+.. |+||||.|+..|+.+|+.+|+++|+++ +..|.+|.|||++|+.++..
T Consensus 545 h~A~~~g~v~~VkfLLe~gAdv~ak~~~--G~TPLH~Aa~~G~~~i~~LLlk~GA~v--na~d~~g~TpL~iA~~lg~~- 619 (1143)
T KOG4177|consen 545 HVAVHYGNVDLVKFLLEHGADVNAKDKL--GYTPLHQAAQQGHNDIAELLLKHGASV--NAADLDGFTPLHIAVRLGYL- 619 (1143)
T ss_pred HHHHhcCCchHHHHhhhCCccccccCCC--CCChhhHHHHcChHHHHHHHHHcCCCC--CcccccCcchhHHHHHhccc-
Confidence 9999999999999999999999999877 999999999999999999999999988 99999999999999988775
Q ss_pred HHHHHHHHHhhhh
Q 030377 157 EEMMRFQRESFSA 169 (178)
Q Consensus 157 ~e~~~~l~~~~~~ 169 (178)
++++.++.....
T Consensus 620 -~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 620 -SVVKLLKVVTAT 631 (1143)
T ss_pred -chhhHHHhccCc
Confidence 888888887766
No 47
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.81 E-value=1.1e-18 Score=112.16 Aligned_cols=123 Identities=43% Similarity=0.732 Sum_probs=110.0
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcH
Q 030377 31 TDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTP 110 (178)
Q Consensus 31 ~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~ 110 (178)
.|..|.||||+|+..++.+++++|++.+.+.+.. +..|.+|++.|+..++.+++++|+..+..++..+.. +.||
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~----~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~--~~~~ 76 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAK----DNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKD--GNTP 76 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcc----CCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCC--CCCH
Confidence 5678999999999999999999999999887666 788999999999999999999999999888877766 8999
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHH
Q 030377 111 LHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQ 163 (178)
Q Consensus 111 l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l 163 (178)
+|+|+..++.+++++|++++.+. ...+..|.||+++|...+. .+++++|
T Consensus 77 l~~a~~~~~~~~~~~L~~~~~~~--~~~~~~~~~~l~~~~~~~~--~~~~~~L 125 (126)
T cd00204 77 LHLAARNGNLDVVKLLLKHGADV--NARDKDGRTPLHLAAKNGH--LEVVKLL 125 (126)
T ss_pred HHHHHHcCcHHHHHHHHHcCCCC--cccCCCCCCHHHHHHhcCC--HHHHHHh
Confidence 99999999999999999999766 7778889999999987744 4777776
No 48
>PHA02795 ankyrin-like protein; Provisional
Probab=99.81 E-value=3.6e-19 Score=134.81 Aligned_cols=134 Identities=10% Similarity=0.004 Sum_probs=114.0
Q ss_pred cCCCCCCcHHHHHHH--cCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCcccc-C---
Q 030377 30 DTDDRGWTPLHIGAR--KGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDART-K--- 103 (178)
Q Consensus 30 ~~~~~g~t~l~~A~~--~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~-~--- 103 (178)
.++..++|+||+++. .|+.+++++|+++|++++.. .+.||+|.|+..++.+++++|+++|++..... .
T Consensus 111 ~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~------~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~ 184 (437)
T PHA02795 111 KNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI------ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLY 184 (437)
T ss_pred hccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC------CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhh
Confidence 466778999999999 89999999999999999864 34799999999999999999999997432221 1
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhhcCCC
Q 030377 104 GACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAGETS 173 (178)
Q Consensus 104 ~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~~~~ 173 (178)
...+.+++|.|...++.+++++|++.|+++ +.+|..|.||||+|+..+. .+++++|.+..++....
T Consensus 185 ~~~~~t~l~~a~~~~~~eIve~LIs~GADI--N~kD~~G~TpLh~Aa~~g~--~eiVelLL~~GAdIN~~ 250 (437)
T PHA02795 185 KIIQYTRGFLVDEPTVLEIYKLCIPYIEDI--NQLDAGGRTLLYRAIYAGY--IDLVSWLLENGANVNAV 250 (437)
T ss_pred hhhccchhHHHHhcCHHHHHHHHHhCcCCc--CcCCCCCCCHHHHHHHcCC--HHHHHHHHHCCCCCCCc
Confidence 112678999999999999999999999988 8899999999999997765 59999999988776543
No 49
>PHA02917 ankyrin-like protein; Provisional
Probab=99.80 E-value=5.3e-19 Score=141.81 Aligned_cols=134 Identities=16% Similarity=0.120 Sum_probs=111.6
Q ss_pred cccCCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCH----HHHHHHHHcCCCCcc
Q 030377 28 VIDTDDRGWTPLHIGARK---GDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHL----EVMDVLLERGADIDA 100 (178)
Q Consensus 28 ~~~~~~~g~t~l~~A~~~---~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~----~~~~~L~~~~~~~~~ 100 (178)
...+|..|+||||+|+.. |+.++++.|++.|++++.. +..|.||||+|+..++. +++++|+..+...+.
T Consensus 25 ~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~----~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~ 100 (661)
T PHA02917 25 NDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHK----NWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNI 100 (661)
T ss_pred ccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCcccc----CCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCC
Confidence 455688999999998665 8899999999999999977 88999999999999984 466788876544554
Q ss_pred ccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhhcC
Q 030377 101 RTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAGE 171 (178)
Q Consensus 101 ~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~~ 171 (178)
.+ ..+++++|+..++.+++++|+++|+++ +..|..|.||||.++..+.+..|++++|.++..+..
T Consensus 101 ~~----~~~~~~~a~~~~~~e~vk~Ll~~Gadi--n~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn 165 (661)
T PHA02917 101 ND----FNIFSYMKSKNVDVDLIKVLVEHGFDL--SVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVL 165 (661)
T ss_pred CC----cchHHHHHhhcCCHHHHHHHHHcCCCC--CccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcc
Confidence 33 347788899999999999999999988 888999999999765555566799999999887653
No 50
>PHA02730 ankyrin-like protein; Provisional
Probab=99.80 E-value=2.2e-18 Score=136.39 Aligned_cols=134 Identities=16% Similarity=0.161 Sum_probs=111.1
Q ss_pred ccCCCCCCcHHHHHHHcC---CHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcC--CHHHHHHHHHcCCCC--ccc
Q 030377 29 IDTDDRGWTPLHIGARKG---DIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGG--HLEVMDVLLERGADI--DAR 101 (178)
Q Consensus 29 ~~~~~~g~t~l~~A~~~~---~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~--~~~~~~~L~~~~~~~--~~~ 101 (178)
..+|..|+||||+|+..+ +.+++++|+++|++++.. +..|.||||+|+..+ +.+++++|++.|++. +..
T Consensus 35 ~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~k----D~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~ 110 (672)
T PHA02730 35 KHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCR----NNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELT 110 (672)
T ss_pred hhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCccc----CCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccc
Confidence 378889999999999997 599999999999999988 899999999999977 799999999996654 555
Q ss_pred cCCCCCCcHHHHHHH--hCCHHHHHHHHH-cCCCCCCC--CCC-CCCCCcccccccccccHHHHHHHHHHhhhhc
Q 030377 102 TKGACGWTPLHTAAK--ERKKEAVRFLIE-NGAFLPDD--IND-SRFNPPLHYCPSLEWAYEEMMRFQRESFSAG 170 (178)
Q Consensus 102 ~~~~~g~t~l~~a~~--~~~~~i~~~Ll~-~g~~~~~~--~~~-~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~ 170 (178)
+.. +.+|++.++. .++.+++++|++ .++++... ..+ ..|-+|+++++..+. .|++++|.++....
T Consensus 111 ~~~--~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~--~eIvklLi~~g~~v 181 (672)
T PHA02730 111 SNI--NDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPR--PEVLLWLLKSECYS 181 (672)
T ss_pred ccc--CCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCc--hHHHHHHHHcCCcc
Confidence 544 7799999988 889999999997 56666322 111 368899999987765 59999999986665
No 51
>PHA02917 ankyrin-like protein; Provisional
Probab=99.79 E-value=1.5e-18 Score=139.23 Aligned_cols=123 Identities=19% Similarity=0.259 Sum_probs=101.7
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHH--hcCCHHHHHHHHHcCCCCccccCC-CCC------
Q 030377 37 TPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAA--QGGHLEVMDVLLERGADIDARTKG-ACG------ 107 (178)
Q Consensus 37 t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~--~~~~~~~~~~L~~~~~~~~~~~~~-~~g------ 107 (178)
+++++|+..++.+++++|+++|++++.. +..|+|||+.++ ..++.+++++|+++|++++..+.. .+|
T Consensus 105 ~~~~~a~~~~~~e~vk~Ll~~Gadin~~----d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~ 180 (661)
T PHA02917 105 IFSYMKSKNVDVDLIKVLVEHGFDLSVK----CENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDY 180 (661)
T ss_pred hHHHHHhhcCCHHHHHHHHHcCCCCCcc----CCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccc
Confidence 3445555666778899999999999987 788999999654 468999999999999999865421 113
Q ss_pred -----CcHHHHHHH-----------hCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHH
Q 030377 108 -----WTPLHTAAK-----------ERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRE 165 (178)
Q Consensus 108 -----~t~l~~a~~-----------~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~ 165 (178)
.||||+|+. .++.+++++|++.|+++ +..|..|.||||+|+..+....|++++|.+
T Consensus 181 ~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadv--n~~d~~G~TpLh~A~~~g~~~~eivk~Li~ 252 (661)
T PHA02917 181 QPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKP--SSIDKNYCTALQYYIKSSHIDIDIVKLLMK 252 (661)
T ss_pred cccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCc--ccCCCCCCcHHHHHHHcCCCcHHHHHHHHh
Confidence 599999986 45899999999999988 889999999999999888765689999975
No 52
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.79 E-value=2.2e-18 Score=142.06 Aligned_cols=130 Identities=23% Similarity=0.264 Sum_probs=115.6
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHH
Q 030377 32 DDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPL 111 (178)
Q Consensus 32 ~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l 111 (178)
+..+.++|+.|+..|+.+.++.|++.|++++.. +..|.||||+|+..|+.+++++|+.+|++++..+.+ |+|||
T Consensus 522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~----d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~--G~TpL 595 (823)
T PLN03192 522 DPNMASNLLTVASTGNAALLEELLKAKLDPDIG----DSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDAN--GNTAL 595 (823)
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCCCCCC----CCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCC--CCCHH
Confidence 445678999999999999999999999999988 889999999999999999999999999999998887 99999
Q ss_pred HHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhhcCCC
Q 030377 112 HTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAGETS 173 (178)
Q Consensus 112 ~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~~~~ 173 (178)
|+|+..|+.+++++|+..++.. ....|.++||.|+..+.. +++++|.+...+....
T Consensus 596 ~~A~~~g~~~iv~~L~~~~~~~----~~~~~~~~L~~Aa~~g~~--~~v~~Ll~~Gadin~~ 651 (823)
T PLN03192 596 WNAISAKHHKIFRILYHFASIS----DPHAAGDLLCTAAKRNDL--TAMKELLKQGLNVDSE 651 (823)
T ss_pred HHHHHhCCHHHHHHHHhcCccc----CcccCchHHHHHHHhCCH--HHHHHHHHCCCCCCCC
Confidence 9999999999999999888754 234577999999987765 9999999987776543
No 53
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.77 E-value=4.5e-18 Score=115.62 Aligned_cols=133 Identities=25% Similarity=0.306 Sum_probs=112.0
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCC
Q 030377 28 VIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACG 107 (178)
Q Consensus 28 ~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g 107 (178)
.++.+.-+++|+++++...+.+.+..+.++ .+|.. |..|.|||.||+..|+.+.|++|+..|++++..... .
T Consensus 122 gnevs~~p~s~~slsVhql~L~~~~~~~~n--~VN~~----De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~--r 193 (296)
T KOG0502|consen 122 GNEVSLMPWSPLSLSVHQLHLDVVDLLVNN--KVNAC----DEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKY--R 193 (296)
T ss_pred CCccccccCChhhHHHHHHHHHHHHHHhhc--cccCc----cccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhh--h
Confidence 345556677788887777766665555443 34554 889999999999999999999999999999998877 7
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhhcCC
Q 030377 108 WTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAGET 172 (178)
Q Consensus 108 ~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~~~ 172 (178)
.++|.+|++.|..+|+++|++++.++ +..|.+|.|||.||+..++. ++++.|.+...++..
T Consensus 194 esALsLAt~ggytdiV~lLL~r~vdV--NvyDwNGgTpLlyAvrgnhv--kcve~Ll~sGAd~t~ 254 (296)
T KOG0502|consen 194 ESALSLATRGGYTDIVELLLTREVDV--NVYDWNGGTPLLYAVRGNHV--KCVESLLNSGADVTQ 254 (296)
T ss_pred hhhHhHHhcCChHHHHHHHHhcCCCc--ceeccCCCceeeeeecCChH--HHHHHHHhcCCCccc
Confidence 89999999999999999999999988 99999999999999987665 889999888777654
No 54
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.76 E-value=2e-17 Score=120.73 Aligned_cols=120 Identities=23% Similarity=0.289 Sum_probs=101.0
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHH
Q 030377 32 DDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPL 111 (178)
Q Consensus 32 ~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l 111 (178)
+..|.||||+|+..++.+++++|+++|++++... +..|.||||+|+..++.+++++|+..|++++..+.. |.||+
T Consensus 67 d~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~---~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~--G~TpL 141 (300)
T PHA02884 67 ENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYA---EEAKITPLYISVLHGCLKCLEILLSYGADINIQTND--MVTPI 141 (300)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCccc---CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC--CCCHH
Confidence 3589999999999999999999999999999752 457999999999999999999999999999998887 99999
Q ss_pred HHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhh
Q 030377 112 HTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (178)
Q Consensus 112 ~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~ 168 (178)
|+|+..++.+++..+...+ .+..+.+|..++. +.|++++|..+..
T Consensus 142 ~~A~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-----n~ei~~~Lish~v 186 (300)
T PHA02884 142 ELALMICNNFLAFMICDNE-------ISNFYKHPKKILI-----NFDILKILVSHFI 186 (300)
T ss_pred HHHHHhCChhHHHHhcCCc-------ccccccChhhhhc-----cHHHHHHHHHHHH
Confidence 9999999988876664322 2445667887652 3588888877665
No 55
>PHA02741 hypothetical protein; Provisional
Probab=99.76 E-value=1.4e-17 Score=113.20 Aligned_cols=101 Identities=27% Similarity=0.366 Sum_probs=91.4
Q ss_pred hhcccCCCCCCcHHHHHHHcCC----HHHHHHHHHcCCCccccccCCC-CCCCcHHHHHHhcCCHHHHHHHHH-cCCCCc
Q 030377 26 RSVIDTDDRGWTPLHIGARKGD----IKLVKQLLDEGMDVNVAAWGPK-SKGVTPLHLAAQGGHLEVMDVLLE-RGADID 99 (178)
Q Consensus 26 ~~~~~~~~~g~t~l~~A~~~~~----~~~v~~ll~~~~~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~L~~-~~~~~~ 99 (178)
.+++.+|..|+||||+|+..|+ .+++++|+..|++++.. + ..|.||||+|+..++.+++++|+. .|++++
T Consensus 51 a~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~----~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~ 126 (169)
T PHA02741 51 AALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQ----EMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLH 126 (169)
T ss_pred hhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCC----CcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC
Confidence 4567789999999999999998 58899999999999977 5 489999999999999999999997 589998
Q ss_pred cccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCC
Q 030377 100 ARTKGACGWTPLHTAAKERKKEAVRFLIENGAF 132 (178)
Q Consensus 100 ~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~ 132 (178)
..+.. |+|||++|+..++.+++++|++.++.
T Consensus 127 ~~n~~--g~tpL~~A~~~~~~~iv~~L~~~~~~ 157 (169)
T PHA02741 127 FCNAD--NKSPFELAIDNEDVAMMQILREIVAT 157 (169)
T ss_pred cCCCC--CCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence 88777 99999999999999999999998764
No 56
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.76 E-value=3.9e-18 Score=114.18 Aligned_cols=120 Identities=21% Similarity=0.261 Sum_probs=99.1
Q ss_pred ccCCcchhhhhhhH-Hhhh---h--------hcccCCCCCCcHHHHHHHcCCH---HHHHHHHHcCCCccccccCCC-CC
Q 030377 8 EQLGPFTLQRKASR-KRFF---R--------SVIDTDDRGWTPLHIGARKGDI---KLVKQLLDEGMDVNVAAWGPK-SK 71 (178)
Q Consensus 8 ~~~~~~~~~~~~~~-~~~~---~--------~~~~~~~~g~t~l~~A~~~~~~---~~v~~ll~~~~~~~~~~~~~~-~~ 71 (178)
...+|+.++.+... ..+. . .+...|..|+||||+|+..+.. +++++|++.|++++.. + ..
T Consensus 16 ~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~----~~~~ 91 (154)
T PHA02736 16 EGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGK----ERVF 91 (154)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCcccc----CCCC
Confidence 34577777666652 1111 0 1223578999999999999987 4688999999999987 5 58
Q ss_pred CCcHHHHHHhcCCHHHHHHHHH-cCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCC
Q 030377 72 GVTPLHLAAQGGHLEVMDVLLE-RGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFL 133 (178)
Q Consensus 72 ~~t~l~~a~~~~~~~~~~~L~~-~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~ 133 (178)
|.||||+|+..++.+++++|+. .|++++..+.. |.||||+|+..|+.+++++|+..|++.
T Consensus 92 g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~--g~tpL~~A~~~~~~~i~~~Ll~~ga~~ 152 (154)
T PHA02736 92 GNTPLHIAVYTQNYELATWLCNQPGVNMEILNYA--FKTPYYVACERHDAKMMNILRAKGAQC 152 (154)
T ss_pred CCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999998 48999988877 999999999999999999999999865
No 57
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.76 E-value=1.2e-17 Score=131.30 Aligned_cols=157 Identities=25% Similarity=0.303 Sum_probs=123.3
Q ss_pred CcchhhhhhhHHhhhhh------------cccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccc-----------cC
Q 030377 11 GPFTLQRKASRKRFFRS------------VIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAA-----------WG 67 (178)
Q Consensus 11 ~~~~~~~~~~~~~~~~~------------~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~-----------~~ 67 (178)
.|+..+++..-+++.+- ++-.+..+.+|||.|+..|+.++++.+++.|....... ..
T Consensus 189 ~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~ 268 (929)
T KOG0510|consen 189 FPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVND 268 (929)
T ss_pred chHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhc
Confidence 45555555554444433 33356678899999999999999999998875422111 13
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCccc
Q 030377 68 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLH 147 (178)
Q Consensus 68 ~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~ 147 (178)
.|..|.||||+|++.|+.++++.|+..|++++.++.+ +.||||.|+..|+++.++-|++.......+..|..|.||||
T Consensus 269 ~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d--~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLH 346 (929)
T KOG0510|consen 269 EDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKD--EESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLH 346 (929)
T ss_pred ccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCC--CCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchh
Confidence 3678999999999999999999999999999998877 99999999999999999999993332445778999999999
Q ss_pred ccccccccHHHHHHHHHHhhhhcC
Q 030377 148 YCPSLEWAYEEMMRFQRESFSAGE 171 (178)
Q Consensus 148 ~a~~~~~~~~e~~~~l~~~~~~~~ 171 (178)
.|+..|. ..++++|.+......
T Consensus 347 laa~~gH--~~v~qlLl~~GA~~~ 368 (929)
T KOG0510|consen 347 LAAKSGH--DRVVQLLLNKGALFL 368 (929)
T ss_pred hhhhcCH--HHHHHHHHhcChhhh
Confidence 9996654 599999998776655
No 58
>PHA02792 ankyrin-like protein; Provisional
Probab=99.76 E-value=8.4e-18 Score=131.94 Aligned_cols=129 Identities=17% Similarity=0.168 Sum_probs=106.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCC--CCcHHHHHHhcCCH---HHHHHHHHcCCCCccccCCCCCC
Q 030377 34 RGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSK--GVTPLHLAAQGGHL---EVMDVLLERGADIDARTKGACGW 108 (178)
Q Consensus 34 ~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~--~~t~l~~a~~~~~~---~~~~~L~~~~~~~~~~~~~~~g~ 108 (178)
...++++.|+..|+.+++++|+++|++++.. +.. +.||||.|...... +++++|+.+|++++..+.. |.
T Consensus 338 ~~~n~~~~Aa~~gn~eIVelLIs~GADIN~k----D~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~--G~ 411 (631)
T PHA02792 338 KHINKYFQKFDNRDPKVVEYILKNGNVVVED----DDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKH--GR 411 (631)
T ss_pred CcchHHHHHHHcCCHHHHHHHHHcCCchhhh----cCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCcccccccc--Cc
Confidence 3567799999999999999999999999877 444 56999987776554 4689999999999998888 99
Q ss_pred cHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCccccccc--cc------ccHHHHHHHHHHhhhhc
Q 030377 109 TPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPS--LE------WAYEEMMRFQRESFSAG 170 (178)
Q Consensus 109 t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~--~~------~~~~e~~~~l~~~~~~~ 170 (178)
||||+|+..++.+++++|++.|+++ +..|..|.||+++|.. .+ ....++++++.+..+..
T Consensus 412 TPLh~Aa~~~n~eivelLLs~GADI--N~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i 479 (631)
T PHA02792 412 SILYYCIESHSVSLVEWLIDNGADI--NITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTI 479 (631)
T ss_pred chHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCCh
Confidence 9999999999999999999999988 8899999999999964 11 12346677776665443
No 59
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.74 E-value=1.7e-17 Score=125.20 Aligned_cols=136 Identities=30% Similarity=0.425 Sum_probs=117.0
Q ss_pred hcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCC
Q 030377 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGAC 106 (178)
Q Consensus 27 ~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~ 106 (178)
.++..+.+|.|++|.+|-..+.++|++++++|+++|.. +..+|||+|.|+..++..++++|+..|+++...+.+..
T Consensus 65 ~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~----d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~ 140 (527)
T KOG0505|consen 65 SPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQ----DNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGN 140 (527)
T ss_pred CccccCCccchhHHHHHhcccHHHHHHHHHhcCCcccc----ccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCC
Confidence 35667889999999999999999999999999999988 88999999999999999999999998766543322221
Q ss_pred ---------------------------------------------------------CCcHHHHHHHhCCHHHHHHHHHc
Q 030377 107 ---------------------------------------------------------GWTPLHTAAKERKKEAVRFLIEN 129 (178)
Q Consensus 107 ---------------------------------------------------------g~t~l~~a~~~~~~~i~~~Ll~~ 129 (178)
|.|.||.|...|..+++++|++.
T Consensus 141 ~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~a 220 (527)
T KOG0505|consen 141 MPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQA 220 (527)
T ss_pred CccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHh
Confidence 88999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhhc
Q 030377 130 GAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAG 170 (178)
Q Consensus 130 g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~ 170 (178)
|.++ +..|..|+||||.|+ .|+..++.++|.++..+-
T Consensus 221 g~~~--~~~D~dgWtPlHAAA--~Wg~~~~~elL~~~ga~~ 257 (527)
T KOG0505|consen 221 GYSV--NIKDYDGWTPLHAAA--HWGQEDACELLVEHGADM 257 (527)
T ss_pred ccCc--ccccccCCCcccHHH--HhhhHhHHHHHHHhhccc
Confidence 9988 889999999999996 567788888888776543
No 60
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.72 E-value=8.5e-17 Score=94.95 Aligned_cols=103 Identities=34% Similarity=0.518 Sum_probs=90.2
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHH
Q 030377 37 TPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAK 116 (178)
Q Consensus 37 t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~ 116 (178)
-.+.|++..|..+-|+..+..|.++|.. ..|++|||+|+-.|..+++++|+..|++++.++.. |-|||..|+.
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~-----~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKy--gITPLLsAvw 76 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNVNEI-----YGGRTPLHYAADYGQLSILEFLISIGANIQDKDKY--GITPLLSAVW 76 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccHHHH-----hCCcccchHhhhcchHHHHHHHHHhccccCCcccc--CCcHHHHHHH
Confidence 4578999999999999999999888764 47899999999999999999999999999887766 9999999999
Q ss_pred hCCHHHHHHHHHcCCCCCCCCCCCCCCCcccc
Q 030377 117 ERKKEAVRFLIENGAFLPDDINDSRFNPPLHY 148 (178)
Q Consensus 117 ~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~ 148 (178)
.|+..|+++|+++|++- ......|.+.+..
T Consensus 77 EGH~~cVklLL~~GAdr--t~~~PdG~~~~ea 106 (117)
T KOG4214|consen 77 EGHRDCVKLLLQNGADR--TIHAPDGTALIEA 106 (117)
T ss_pred HhhHHHHHHHHHcCccc--ceeCCCchhHHhh
Confidence 99999999999999987 5555566665543
No 61
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.72 E-value=5.5e-17 Score=98.72 Aligned_cols=87 Identities=40% Similarity=0.556 Sum_probs=76.6
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCccccccccccc
Q 030377 76 LHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWA 155 (178)
Q Consensus 76 l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~ 155 (178)
||+|+..++.+++++|+..+.+++. |+||||+|+..|+.+++++|++.|+++ +.+|.+|.||+|+|+..+.
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~------~~~~l~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~- 71 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL------GNTALHYAAENGNLEIVKLLLENGADI--NSQDKNGNTALHYAAENGN- 71 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS------SSBHHHHHHHTTTHHHHHHHHHTTTCT--T-BSTTSSBHHHHHHHTTH-
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC------CCCHHHHHHHcCCHHHHHHHHHhcccc--cccCCCCCCHHHHHHHcCC-
Confidence 7899999999999999998877765 679999999999999999999999988 8889999999999998755
Q ss_pred HHHHHHHHHHhhhhcCC
Q 030377 156 YEEMMRFQRESFSAGET 172 (178)
Q Consensus 156 ~~e~~~~l~~~~~~~~~ 172 (178)
.+++++|.+...++..
T Consensus 72 -~~~~~~Ll~~g~~~~~ 87 (89)
T PF12796_consen 72 -LEIVKLLLEHGADVNI 87 (89)
T ss_dssp -HHHHHHHHHTTT-TTS
T ss_pred -HHHHHHHHHcCCCCCC
Confidence 6999999998766543
No 62
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.72 E-value=5.3e-17 Score=132.95 Aligned_cols=130 Identities=26% Similarity=0.269 Sum_probs=107.7
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccc----------CCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCcccc
Q 030377 33 DRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAW----------GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDART 102 (178)
Q Consensus 33 ~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~----------~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~ 102 (178)
..|.||||+|+..|+.++++.|+++|++++.... .....|.+||+.|+..++.+++++|++.|++++..+
T Consensus 126 ~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d 205 (743)
T TIGR00870 126 TPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTAD 205 (743)
T ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHh
Confidence 4699999999999999999999999999986421 001358899999999999999999999999999988
Q ss_pred CCCCCCcHHHHHHHhC---------CHHHHHHHHHcCCCCC-C----CCCCCCCCCcccccccccccHHHHHHHHHHh
Q 030377 103 KGACGWTPLHTAAKER---------KKEAVRFLIENGAFLP-D----DINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (178)
Q Consensus 103 ~~~~g~t~l~~a~~~~---------~~~i~~~Ll~~g~~~~-~----~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~ 166 (178)
.. |+||||+|+..+ ...+.+++++.++... . ...|..|.||+++|+..+.. ++.+++.+.
T Consensus 206 ~~--g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~--~l~~lLL~~ 279 (743)
T TIGR00870 206 SL--GNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRI--VLFRLKLAI 279 (743)
T ss_pred hh--hhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCc--cHHHHHHHH
Confidence 87 999999999886 2446677777766431 1 45688999999999987764 899888874
No 63
>PHA02792 ankyrin-like protein; Provisional
Probab=99.71 E-value=7.4e-17 Score=126.70 Aligned_cols=136 Identities=19% Similarity=0.186 Sum_probs=113.0
Q ss_pred hhhcccCCCCCCcHHHHHH-HcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHh-cCCHHHHHHHHHcCCCCccc-
Q 030377 25 FRSVIDTDDRGWTPLHIGA-RKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQ-GGHLEVMDVLLERGADIDAR- 101 (178)
Q Consensus 25 ~~~~~~~~~~g~t~l~~A~-~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~-~~~~~~~~~L~~~~~~~~~~- 101 (178)
.......+.+|.+++|+-+ ..|+.|++++|+++|+++|.. +..+.+|+++|+. .++.+++++|++.|+++...
T Consensus 61 ~~~~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~----~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~ 136 (631)
T PHA02792 61 LSSVDYKNINDFDIFEYLCSDNIDIELLKLLISKGLEINSI----KNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNI 136 (631)
T ss_pred HhCCCcCccCCccHHHHHHHhcccHHHHHHHHHcCCCcccc----cCCCCcceeEeecCCCChHHHHHHHHCCCCccccc
Confidence 3445567778889997655 568899999999999999988 5668899999966 58999999999999873210
Q ss_pred ---------------------------------cCCCCCCcHHHHHHHhC-------CHHHHHHHHHcCCCCCCCCCCCC
Q 030377 102 ---------------------------------TKGACGWTPLHTAAKER-------KKEAVRFLIENGAFLPDDINDSR 141 (178)
Q Consensus 102 ---------------------------------~~~~~g~t~l~~a~~~~-------~~~i~~~Ll~~g~~~~~~~~~~~ 141 (178)
-.+..|.||||+|+..+ +.+++++|+++|+++ +..|..
T Consensus 137 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~--~~~d~~ 214 (631)
T PHA02792 137 QYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEM--RYYTYR 214 (631)
T ss_pred ccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCc--CccCCC
Confidence 01222999999999999 899999999999988 888999
Q ss_pred CCCcccccccccccHHHHHHHHHHh
Q 030377 142 FNPPLHYCPSLEWAYEEMMRFQRES 166 (178)
Q Consensus 142 g~t~l~~a~~~~~~~~e~~~~l~~~ 166 (178)
|.||||+|+.......|++++|.+.
T Consensus 215 g~t~l~~~~~~~~i~~ei~~~L~~~ 239 (631)
T PHA02792 215 EHTTLYYYVDKCDIKREIFDALFDS 239 (631)
T ss_pred CChHHHHHHHcccchHHHHHHHHhc
Confidence 9999999998775578999999874
No 64
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.71 E-value=5.1e-17 Score=133.73 Aligned_cols=153 Identities=31% Similarity=0.518 Sum_probs=128.4
Q ss_pred CCcchhhhhhh--------HHhhhhhcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHh
Q 030377 10 LGPFTLQRKAS--------RKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQ 81 (178)
Q Consensus 10 ~~~~~~~~~~~--------~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~ 81 (178)
++|+.++.+.. ...+..+++.....|.||||.|+..|+.+++..+++.++..+.. ...+.+++|.+..
T Consensus 441 ~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~----~~~~l~~lhla~~ 516 (1143)
T KOG4177|consen 441 YTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLD----AKKGLTPLHLAAD 516 (1143)
T ss_pred CChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCcc----chhccchhhhhhh
Confidence 56666665554 22344556667788999999999999999999999888665554 5678899999999
Q ss_pred cCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHH
Q 030377 82 GGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMR 161 (178)
Q Consensus 82 ~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~ 161 (178)
.+...++..++..|+.++..+.. +.||||.||..|+..+|++|+++|+++ +..+..|.||||.|+..|. .+++.
T Consensus 517 ~~~v~~~~~l~~~ga~v~~~~~r--~~TpLh~A~~~g~v~~VkfLLe~gAdv--~ak~~~G~TPLH~Aa~~G~--~~i~~ 590 (1143)
T KOG4177|consen 517 EDTVKVAKILLEHGANVDLRTGR--GYTPLHVAVHYGNVDLVKFLLEHGADV--NAKDKLGYTPLHQAAQQGH--NDIAE 590 (1143)
T ss_pred hhhHHHHHHHhhcCCceehhccc--ccchHHHHHhcCCchHHHHhhhCCccc--cccCCCCCChhhHHHHcCh--HHHHH
Confidence 99999999999999999988877 999999999999999999999999998 8889999999999999885 49999
Q ss_pred HHHHhhhhcCC
Q 030377 162 FQRESFSAGET 172 (178)
Q Consensus 162 ~l~~~~~~~~~ 172 (178)
+|.++...+..
T Consensus 591 LLlk~GA~vna 601 (1143)
T KOG4177|consen 591 LLLKHGASVNA 601 (1143)
T ss_pred HHHHcCCCCCc
Confidence 99998877653
No 65
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.70 E-value=1.7e-16 Score=125.07 Aligned_cols=148 Identities=28% Similarity=0.327 Sum_probs=123.8
Q ss_pred hhhhhhHHhhhhhccc----CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccC-------C------------CCC
Q 030377 15 LQRKASRKRFFRSVID----TDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWG-------P------------KSK 71 (178)
Q Consensus 15 ~~~~~~~~~~~~~~~~----~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~-------~------------~~~ 71 (178)
..++...+.+++.++. ....|+|+||.|+.+.+.+.|+.|++.|+|++.+..+ + -..
T Consensus 160 ~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~Yf 239 (782)
T KOG3676|consen 160 ELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYF 239 (782)
T ss_pred HHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeee
Confidence 4444445555544333 2458999999999999999999999999998876521 0 124
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCccccccc
Q 030377 72 GVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPS 151 (178)
Q Consensus 72 ~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~ 151 (178)
|+.||..|+..++.+|+++|+++|+|++.+|.. |+|.||..+..-..++.+.+++.|++....+.|..|.|||-.|+.
T Consensus 240 GEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~--GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAak 317 (782)
T KOG3676|consen 240 GEYPLSFAACTNQPEIVRLLLAHGADPNAQDSN--GNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAK 317 (782)
T ss_pred ccCchHHHHHcCCHHHHHHHHhcCCCCCccccC--CChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHH
Confidence 788999999999999999999999999999999 999999999999999999999999983348999999999999998
Q ss_pred ccccHHHHHHHHHHh
Q 030377 152 LEWAYEEMMRFQRES 166 (178)
Q Consensus 152 ~~~~~~e~~~~l~~~ 166 (178)
.|. .+|.+.+.+.
T Consensus 318 lGk--~emf~~ile~ 330 (782)
T KOG3676|consen 318 LGK--KEMFQHILER 330 (782)
T ss_pred hhh--HHHHHHHHHh
Confidence 766 4888888776
No 66
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.69 E-value=2.1e-15 Score=106.30 Aligned_cols=129 Identities=39% Similarity=0.488 Sum_probs=114.7
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCC-----HHHHHHHHHcCC---CCc
Q 030377 28 VIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGH-----LEVMDVLLERGA---DID 99 (178)
Q Consensus 28 ~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~-----~~~~~~L~~~~~---~~~ 99 (178)
....+..+.++++.++..+..+.+.+++..|.+++.. +..|.||+|+|+..++ .+++++|+..|+ ..+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~ 141 (235)
T COG0666 66 LAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAK----DADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNN 141 (235)
T ss_pred cccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccc----cCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCcc
Confidence 3445566899999999999999999999999999877 8999999999999999 999999999999 555
Q ss_pred cccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHh
Q 030377 100 ARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (178)
Q Consensus 100 ~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~ 166 (178)
..+.. |.||+|+|+..|+.++++.|++.|+++ ...+..|.|+++.|...+. .++++++.+.
T Consensus 142 ~~~~~--g~tpl~~A~~~~~~~~~~~ll~~~~~~--~~~~~~g~t~l~~a~~~~~--~~~~~~l~~~ 202 (235)
T COG0666 142 LRDED--GNTPLHWAALNGDADIVELLLEAGADP--NSRNSYGVTALDPAAKNGR--IELVKLLLDK 202 (235)
T ss_pred ccCCC--CCchhHHHHHcCchHHHHHHHhcCCCC--cccccCCCcchhhhcccch--HHHHHHHHhc
Confidence 55666 999999999999999999999999988 7779999999999987765 4888888764
No 67
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.68 E-value=4.7e-16 Score=127.46 Aligned_cols=99 Identities=32% Similarity=0.309 Sum_probs=79.9
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHHcCCCCcccc------------CCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCC
Q 030377 70 SKGVTPLHLAAQGGHLEVMDVLLERGADIDART------------KGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDI 137 (178)
Q Consensus 70 ~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~------------~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~ 137 (178)
..|.||||+|+..++.+++++|+++|++++... ...+|.||||.|+..|+.+++++|++.|+++ +.
T Consensus 126 ~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadi--n~ 203 (743)
T TIGR00870 126 TPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADI--LT 203 (743)
T ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcch--hh
Confidence 358999999999999999999999999998652 1224889999999999999999999999987 88
Q ss_pred CCCCCCCccccccccccc-------HHHHHHHHHHhhhhc
Q 030377 138 NDSRFNPPLHYCPSLEWA-------YEEMMRFQRESFSAG 170 (178)
Q Consensus 138 ~~~~g~t~l~~a~~~~~~-------~~e~~~~l~~~~~~~ 170 (178)
+|..|+||+|+|+..+.. ...+.+++.+.....
T Consensus 204 ~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~ 243 (743)
T TIGR00870 204 ADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKL 243 (743)
T ss_pred HhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999865421 223555666554443
No 68
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.66 E-value=1.4e-16 Score=124.60 Aligned_cols=131 Identities=30% Similarity=0.366 Sum_probs=120.0
Q ss_pred hhcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCC
Q 030377 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (178)
Q Consensus 26 ~~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~ 105 (178)
..++.+|.+|.|+||.|+..|+.++++.|++..+-++.. +..|.+|||+|++.|+.+++++++..+..+|..+..
T Consensus 40 ds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~----d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e- 114 (854)
T KOG0507|consen 40 DSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLC----DTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIE- 114 (854)
T ss_pred ccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhh----hccCcceEEehhhcCcchHHHHHHhcccCCCccccc-
Confidence 446667889999999999999999999999998888777 788999999999999999999999999888888877
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHh
Q 030377 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (178)
Q Consensus 106 ~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~ 166 (178)
|.||||.|++.|+.+++.+|+.+|+++ -+.|.+++|++..|++-|.. ++++.|...
T Consensus 115 -~~tplhlaaqhgh~dvv~~Ll~~~adp--~i~nns~~t~ldlA~qfgr~--~Vvq~ll~~ 170 (854)
T KOG0507|consen 115 -NETPLHLAAQHGHLEVVFYLLKKNADP--FIRNNSKETVLDLASRFGRA--EVVQMLLQK 170 (854)
T ss_pred -CcCccchhhhhcchHHHHHHHhcCCCc--cccCcccccHHHHHHHhhhh--HHHHHHhhh
Confidence 999999999999999999999999988 88899999999999988765 888888766
No 69
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.62 E-value=6.5e-15 Score=118.91 Aligned_cols=105 Identities=36% Similarity=0.423 Sum_probs=94.8
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHh
Q 030377 38 PLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKE 117 (178)
Q Consensus 38 ~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~ 117 (178)
.|+.|+..|+.+.++.|++.|++++.. +..|.||||+|+..++.+++++|+..|++++..+.. |.||||+|+..
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~~----d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~--G~TpLh~A~~~ 158 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNCR----DYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKD--GKTPLELAEEN 158 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCc----CCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC--CCCHHHHHHHC
Confidence 488999999999999999999999988 789999999999999999999999999999998888 99999999999
Q ss_pred CCHHHHHHHHHc-------CCCCCCCCCCCCCCCcccccc
Q 030377 118 RKKEAVRFLIEN-------GAFLPDDINDSRFNPPLHYCP 150 (178)
Q Consensus 118 ~~~~i~~~Ll~~-------g~~~~~~~~~~~g~t~l~~a~ 150 (178)
|+.+++++|+.+ |++. ...+..|.+|+..+.
T Consensus 159 g~~~iv~~Ll~~~~~~~~~ga~~--~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 159 GFREVVQLLSRHSQCHFELGANA--KPDSFTGKPPSLEDS 196 (664)
T ss_pred CcHHHHHHHHhCCCcccccCCCC--CccccCCCCccchhh
Confidence 999999999998 7766 666777777666443
No 70
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.62 E-value=1.7e-15 Score=114.50 Aligned_cols=127 Identities=32% Similarity=0.530 Sum_probs=111.2
Q ss_pred HHhhhhhcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccc---c-------------------------------
Q 030377 21 RKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAA---W------------------------------- 66 (178)
Q Consensus 21 ~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~---~------------------------------- 66 (178)
.-+...+++..|..||||+|.|+..|+..++++++..|+++.... .
T Consensus 92 l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~ 171 (527)
T KOG0505|consen 92 LVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARK 171 (527)
T ss_pred HHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhh
Confidence 445567789999999999999999999999999999987643322 0
Q ss_pred ---------------------CCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHH
Q 030377 67 ---------------------GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRF 125 (178)
Q Consensus 67 ---------------------~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~ 125 (178)
-.+..|.|+||+|+..|..+..++|+..|.+++.+|.+ ||||||.|+.+|..+.+++
T Consensus 172 ~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~d--gWtPlHAAA~Wg~~~~~el 249 (527)
T KOG0505|consen 172 AEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYD--GWTPLHAAAHWGQEDACEL 249 (527)
T ss_pred hhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCccccccc--CCCcccHHHHhhhHhHHHH
Confidence 01223889999999999999999999999999999999 9999999999999999999
Q ss_pred HHHcCCCCCCCCCCCCCCCccccccc
Q 030377 126 LIENGAFLPDDINDSRFNPPLHYCPS 151 (178)
Q Consensus 126 Ll~~g~~~~~~~~~~~g~t~l~~a~~ 151 (178)
|+++|+++ ......|.||+.+|..
T Consensus 250 L~~~ga~~--d~~t~~g~~p~dv~de 273 (527)
T KOG0505|consen 250 LVEHGADM--DAKTKMGETPLDVADE 273 (527)
T ss_pred HHHhhccc--chhhhcCCCCccchhh
Confidence 99999988 7788899999999964
No 71
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.60 E-value=7.1e-15 Score=111.28 Aligned_cols=125 Identities=29% Similarity=0.458 Sum_probs=107.8
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHh
Q 030377 38 PLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKE 117 (178)
Q Consensus 38 ~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~ 117 (178)
.|.-|+..|.++.|+.++..-.|+..- +..|.|+||.|+..|+.+||+||+..|+++|..|.+ ||||||+|+..
T Consensus 553 LLLDaaLeGEldlVq~~i~ev~DpSqp----NdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSd--GWTPLHCAASC 626 (752)
T KOG0515|consen 553 LLLDAALEGELDLVQRIIYEVTDPSQP----NDEGITALHNAICAGHYEIVKFLIEFGANVNAADSD--GWTPLHCAASC 626 (752)
T ss_pred HHHhhhhcchHHHHHHHHHhhcCCCCC----CccchhHHhhhhhcchhHHHHHHHhcCCcccCccCC--CCchhhhhhhc
Confidence 356688899999999999887787766 788999999999999999999999999999999999 99999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhh
Q 030377 118 RKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (178)
Q Consensus 118 ~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~ 169 (178)
++..+++.|++.|+-+ .-.+=..+.|+..-|-....++....+||...-..
T Consensus 627 Nnv~~ckqLVe~Gaav-fAsTlSDmeTa~eKCee~eeGY~~CsqyL~~vqes 677 (752)
T KOG0515|consen 627 NNVPMCKQLVESGAAV-FASTLSDMETAAEKCEEMEEGYDQCSQYLYGVQES 677 (752)
T ss_pred CchHHHHHHHhccceE-EeeecccccchhhhcchhhhhHHHHHHHHHHHHHh
Confidence 9999999999999854 12223345799999988888899999999875443
No 72
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.58 E-value=6.1e-15 Score=104.45 Aligned_cols=115 Identities=33% Similarity=0.559 Sum_probs=92.4
Q ss_pred HHcCCHHHHHHHHHc-CCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHH
Q 030377 43 ARKGDIKLVKQLLDE-GMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKE 121 (178)
Q Consensus 43 ~~~~~~~~v~~ll~~-~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~ 121 (178)
|+.|+.-.|+..++. .-|.|.. +..|.+|||+|++.|+..+++.|+..|+.+|..+.. ..||||+|+..|+-+
T Consensus 8 cregna~qvrlwld~tehdln~g----ddhgfsplhwaakegh~aivemll~rgarvn~tnmg--ddtplhlaaahghrd 81 (448)
T KOG0195|consen 8 CREGNAFQVRLWLDDTEHDLNVG----DDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMG--DDTPLHLAAAHGHRD 81 (448)
T ss_pred hhcCCeEEEEEEecCcccccccc----cccCcchhhhhhhcccHHHHHHHHhcccccccccCC--CCcchhhhhhcccHH
Confidence 344443333333332 2455555 778999999999999999999999999999988887 789999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhh
Q 030377 122 AVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (178)
Q Consensus 122 i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~ 167 (178)
+++.|+++.+|+ +..|..|+||||||+. |+++.+.+=|....
T Consensus 82 ivqkll~~kadv--navnehgntplhyacf--wgydqiaedli~~g 123 (448)
T KOG0195|consen 82 IVQKLLSRKADV--NAVNEHGNTPLHYACF--WGYDQIAEDLISCG 123 (448)
T ss_pred HHHHHHHHhccc--chhhccCCCchhhhhh--hcHHHHHHHHHhcc
Confidence 999999999998 9999999999999985 45556666665443
No 73
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.58 E-value=1.2e-14 Score=105.62 Aligned_cols=92 Identities=33% Similarity=0.476 Sum_probs=85.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHc-CCCCccccCCCCCCcH
Q 030377 32 DDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLER-GADIDARTKGACGWTP 110 (178)
Q Consensus 32 ~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~-~~~~~~~~~~~~g~t~ 110 (178)
...|+|+||+|+.+|..++|+.|+.+|+|+|.. |..|.|+|+.|+.+|+.+++++|+.. ++++...|.+ |.|+
T Consensus 337 sQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQ----DdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~D--gSTA 410 (452)
T KOG0514|consen 337 SQHGQTALMLAVSHGRVDMVKALLACGADVNIQ----DDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVD--GSTA 410 (452)
T ss_pred hhhcchhhhhhhhcCcHHHHHHHHHccCCCccc----cCCccHHHhhhhhhChHHHHHHHhccCcccceeecCC--Cchh
Confidence 357999999999999999999999999999998 89999999999999999999999984 6788888888 9999
Q ss_pred HHHHHHhCCHHHHHHHHHc
Q 030377 111 LHTAAKERKKEAVRFLIEN 129 (178)
Q Consensus 111 l~~a~~~~~~~i~~~Ll~~ 129 (178)
|..|...|+.+|+-.|..+
T Consensus 411 l~IAleagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 411 LSIALEAGHREIAVMLYAH 429 (452)
T ss_pred hhhHHhcCchHHHHHHHHH
Confidence 9999999999999888765
No 74
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.57 E-value=3.5e-14 Score=100.41 Aligned_cols=98 Identities=34% Similarity=0.396 Sum_probs=91.0
Q ss_pred hhhcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCC
Q 030377 25 FRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKG 104 (178)
Q Consensus 25 ~~~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~ 104 (178)
.+.++.+|..|.++|..|++.|+.+.++.+++.|+|+|... +..++||||.|+..|+.++.++|++.|+.....+.-
T Consensus 35 vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~q---hg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsv 111 (396)
T KOG1710|consen 35 VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQ---HGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSV 111 (396)
T ss_pred hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCccc---ccccccHHHHHHHcCCchHHHHHHhccCccccccch
Confidence 56688999999999999999999999999999999999765 778999999999999999999999999998888777
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHH
Q 030377 105 ACGWTPLHTAAKERKKEAVRFLI 127 (178)
Q Consensus 105 ~~g~t~l~~a~~~~~~~i~~~Ll 127 (178)
|+|+-.+|+.-|+.+|+.++-
T Consensus 112 --grTAaqmAAFVG~H~CV~iIN 132 (396)
T KOG1710|consen 112 --GRTAAQMAAFVGHHECVAIIN 132 (396)
T ss_pred --hhhHHHHHHHhcchHHHHHHh
Confidence 999999999999999988774
No 75
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.56 E-value=1.6e-14 Score=79.45 Aligned_cols=54 Identities=54% Similarity=0.876 Sum_probs=29.3
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHH
Q 030377 72 GVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLI 127 (178)
Q Consensus 72 ~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll 127 (178)
|.||+|+|+..|+.+++++|++.|.+++..+.+ |.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~--g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDED--GRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TT--S--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCC--CCCHHHHHHHccCHHHHHHHC
Confidence 345666666666666666666666666655544 666666666666666666654
No 76
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.54 E-value=3.5e-14 Score=78.09 Aligned_cols=54 Identities=46% Similarity=0.860 Sum_probs=46.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHH
Q 030377 35 GWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLL 92 (178)
Q Consensus 35 g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~ 92 (178)
|.|+||+|++.|+.+++++|++.|.+++.. +..|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~----d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQ----DEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-----TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCC----CCCCCCHHHHHHHccCHHHHHHHC
Confidence 689999999999999999999999999988 889999999999999999999985
No 77
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.53 E-value=9.2e-15 Score=80.90 Aligned_cols=50 Identities=46% Similarity=0.641 Sum_probs=20.2
Q ss_pred CCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCccccc
Q 030377 96 ADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYC 149 (178)
Q Consensus 96 ~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a 149 (178)
.+++..+.. |.||||+|+..|+.+++++|++.|+++ +.+|..|+||+++|
T Consensus 7 ~~~n~~d~~--G~T~LH~A~~~g~~~~v~~Ll~~g~d~--~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 7 ADVNAQDKY--GNTPLHWAARYGHSEVVRLLLQNGADP--NAKDKDGQTPLHYA 56 (56)
T ss_dssp --TT---TT--S--HHHHHHHHT-HHHHHHHHHCT--T--T---TTS--HHHH-
T ss_pred CCCcCcCCC--CCcHHHHHHHcCcHHHHHHHHHCcCCC--CCCcCCCCCHHHhC
Confidence 445555444 566666666666666666666555555 55566666666554
No 78
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.51 E-value=6.9e-14 Score=110.58 Aligned_cols=141 Identities=28% Similarity=0.253 Sum_probs=111.3
Q ss_pred hhhcccCCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCc-cccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCcc
Q 030377 25 FRSVIDTDDRGWTPLHIGARK---GDIKLVKQLLDEGMDV-NVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDA 100 (178)
Q Consensus 25 ~~~~~~~~~~g~t~l~~A~~~---~~~~~v~~ll~~~~~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~ 100 (178)
.-++..+..-|.|.||.|... ++.++++.|++..+.+ |.........|.||||+|+.+.+.++|++|+..|+|++.
T Consensus 133 ~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~a 212 (782)
T KOG3676|consen 133 DWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHA 212 (782)
T ss_pred hhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhh
Confidence 345666778899999999974 3348889999875432 211111145799999999999999999999999999975
Q ss_pred cc---------C------------CCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHH
Q 030377 101 RT---------K------------GACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEM 159 (178)
Q Consensus 101 ~~---------~------------~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~ 159 (178)
+. . -..|..||..|+..++.+|+++|++.|+|+ +.+|.+|+|.||.++.. -..+|
T Consensus 213 Ra~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~--~aqDS~GNTVLH~lVi~--~~~~M 288 (782)
T KOG3676|consen 213 RACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADP--NAQDSNGNTVLHMLVIH--FVTEM 288 (782)
T ss_pred HhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCC--CccccCCChHHHHHHHH--HHHHH
Confidence 42 1 111889999999999999999999999988 99999999999999864 34678
Q ss_pred HHHHHHhhhh
Q 030377 160 MRFQRESFSA 169 (178)
Q Consensus 160 ~~~l~~~~~~ 169 (178)
-.++.+...+
T Consensus 289 y~~~L~~ga~ 298 (782)
T KOG3676|consen 289 YDLALELGAN 298 (782)
T ss_pred HHHHHhcCCC
Confidence 8887776665
No 79
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.50 E-value=1.1e-13 Score=81.92 Aligned_cols=74 Identities=30% Similarity=0.503 Sum_probs=68.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHH
Q 030377 34 RGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHT 113 (178)
Q Consensus 34 ~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~ 113 (178)
.|++|||+|+-.|+.+++++|+..|++++.. +.+|.|||.-|+..|+.+||++|+++|++-.....+ |.+.+..
T Consensus 33 ggR~plhyAAD~GQl~ilefli~iGA~i~~k----DKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~Pd--G~~~~ea 106 (117)
T KOG4214|consen 33 GGRTPLHYAADYGQLSILEFLISIGANIQDK----DKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPD--GTALIEA 106 (117)
T ss_pred CCcccchHhhhcchHHHHHHHHHhccccCCc----cccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCC--chhHHhh
Confidence 7899999999999999999999999999988 899999999999999999999999999999888877 7655443
No 80
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.49 E-value=4.3e-14 Score=78.17 Aligned_cols=55 Identities=55% Similarity=0.789 Sum_probs=26.6
Q ss_pred HHHcC-CCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHH
Q 030377 54 LLDEG-MDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTA 114 (178)
Q Consensus 54 ll~~~-~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a 114 (178)
|+++| .+++.. +..|.||||+|+..|+.+++++|+..|++++.++.. |+||+|+|
T Consensus 1 LL~~~~~~~n~~----d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~--G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQ----DKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKD--GQTPLHYA 56 (56)
T ss_dssp -----T--TT-------TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TT--S--HHHH-
T ss_pred CCccCcCCCcCc----CCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCC--CCCHHHhC
Confidence 45555 566666 677778888888888888888888777777777777 77888776
No 81
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.49 E-value=1.2e-12 Score=83.77 Aligned_cols=93 Identities=49% Similarity=0.831 Sum_probs=85.0
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCC
Q 030377 29 IDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGW 108 (178)
Q Consensus 29 ~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~ 108 (178)
...+..|.+++|.|+..++.+++++|++.++.++.. +..+.||+|+|+..++.+++++|+..+.+.+..+.. +.
T Consensus 34 ~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~----~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~--~~ 107 (126)
T cd00204 34 NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNAR----DKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKD--GR 107 (126)
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccc----CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCC--CC
Confidence 567889999999999999999999999999877766 678889999999999999999999999888888776 99
Q ss_pred cHHHHHHHhCCHHHHHHHH
Q 030377 109 TPLHTAAKERKKEAVRFLI 127 (178)
Q Consensus 109 t~l~~a~~~~~~~i~~~Ll 127 (178)
||+++|...++.+++++|+
T Consensus 108 ~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 108 TPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred CHHHHHHhcCCHHHHHHhC
Confidence 9999999999999999874
No 82
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.44 E-value=9e-13 Score=93.37 Aligned_cols=121 Identities=26% Similarity=0.343 Sum_probs=105.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHH
Q 030377 34 RGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHT 113 (178)
Q Consensus 34 ~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~ 113 (178)
....+|.-++-.++.+....|++.-.++|.+ |..|.++|..|+..|+.+++++|++.|+|+|..... .+.|||+.
T Consensus 11 ~~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~----D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg-~~YTpLmF 85 (396)
T KOG1710|consen 11 APKSPLLEAIDKNDTEAALALLSTVRQVNQR----DPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHG-TLYTPLMF 85 (396)
T ss_pred chhhHHHHHHccCcHHHHHHHHHHhhhhhcc----CCCcccHHHHHHhcCcHHHHHHHHHhCCCcCccccc-ccccHHHH
Confidence 3457899999999999999999876678887 899999999999999999999999999999977543 38899999
Q ss_pred HHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHH
Q 030377 114 AAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQ 163 (178)
Q Consensus 114 a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l 163 (178)
|+-+|+.++..+|++.|+.+ ...|.-|.|+...|+..|+. +.+..+
T Consensus 86 AALSGn~dvcrllldaGa~~--~~vNsvgrTAaqmAAFVG~H--~CV~iI 131 (396)
T KOG1710|consen 86 AALSGNQDVCRLLLDAGARM--YLVNSVGRTAAQMAAFVGHH--ECVAII 131 (396)
T ss_pred HHHcCCchHHHHHHhccCcc--ccccchhhhHHHHHHHhcch--HHHHHH
Confidence 99999999999999999987 77888999999999987765 544443
No 83
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.42 E-value=2e-12 Score=91.00 Aligned_cols=99 Identities=40% Similarity=0.621 Sum_probs=90.5
Q ss_pred hhcccCCCCCCcHHHHHHHcCC-----HHHHHHHHHcCC---CccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCC
Q 030377 26 RSVIDTDDRGWTPLHIGARKGD-----IKLVKQLLDEGM---DVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGAD 97 (178)
Q Consensus 26 ~~~~~~~~~g~t~l~~A~~~~~-----~~~v~~ll~~~~---~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~ 97 (178)
.++..++..|.|++|+|+..++ .++++.|++.|+ ..+.. +..|.||||+|+..++.+++++|+..|++
T Consensus 97 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~----~~~g~tpl~~A~~~~~~~~~~~ll~~~~~ 172 (235)
T COG0666 97 ADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLR----DEDGNTPLHWAALNGDADIVELLLEAGAD 172 (235)
T ss_pred CCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCcccc----CCCCCchhHHHHHcCchHHHHHHHhcCCC
Confidence 4457889999999999999999 999999999999 44444 88999999999999999999999999999
Q ss_pred CccccCCCCCCcHHHHHHHhCCHHHHHHHHHcC
Q 030377 98 IDARTKGACGWTPLHTAAKERKKEAVRFLIENG 130 (178)
Q Consensus 98 ~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g 130 (178)
++..+.. |.|++++|+..++.++++.++..+
T Consensus 173 ~~~~~~~--g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 173 PNSRNSY--GVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred CcccccC--CCcchhhhcccchHHHHHHHHhcC
Confidence 9988766 999999999999999999999976
No 84
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.41 E-value=1.1e-12 Score=103.26 Aligned_cols=91 Identities=38% Similarity=0.519 Sum_probs=43.6
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHH
Q 030377 33 DRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLH 112 (178)
Q Consensus 33 ~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~ 112 (178)
..|.+|||+|+..|+.++++.++.++..+|.. ...|.||||.++..++.+.+.+|+.+|++.-+.+.. +.|++.
T Consensus 80 ~kg~~plhlaaw~g~~e~vkmll~q~d~~na~----~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns--~~t~ld 153 (854)
T KOG0507|consen 80 TKGILPLHLAAWNGNLEIVKMLLLQTDILNAV----NIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNS--KETVLD 153 (854)
T ss_pred ccCcceEEehhhcCcchHHHHHHhcccCCCcc----cccCcCccchhhhhcchHHHHHHHhcCCCccccCcc--cccHHH
Confidence 44445555555555555555555444444433 444445555555555555555555554444444433 444444
Q ss_pred HHHHhCCHHHHHHHHHc
Q 030377 113 TAAKERKKEAVRFLIEN 129 (178)
Q Consensus 113 ~a~~~~~~~i~~~Ll~~ 129 (178)
.|++.|..++++.|++.
T Consensus 154 lA~qfgr~~Vvq~ll~~ 170 (854)
T KOG0507|consen 154 LASRFGRAEVVQMLLQK 170 (854)
T ss_pred HHHHhhhhHHHHHHhhh
Confidence 44444444444444443
No 85
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.40 E-value=1.1e-12 Score=106.10 Aligned_cols=86 Identities=29% Similarity=0.368 Sum_probs=80.0
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccc
Q 030377 75 PLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEW 154 (178)
Q Consensus 75 ~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~ 154 (178)
.|+.|+..|+.+++++|+..|++++..+.. |+||||+|+..|+.+++++|++.|+++ +..|..|.||||+|+..+.
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~--G~TpLh~Aa~~g~~eiv~~LL~~Gadv--n~~d~~G~TpLh~A~~~g~ 160 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNCRDYD--GRTPLHIACANGHVQVVRVLLEFGADP--TLLDKDGKTPLELAEENGF 160 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCC--CCcHHHHHHHCCCHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHCCc
Confidence 588999999999999999999999998877 999999999999999999999999988 8899999999999998765
Q ss_pred cHHHHHHHHHHh
Q 030377 155 AYEEMMRFQRES 166 (178)
Q Consensus 155 ~~~e~~~~l~~~ 166 (178)
.+++++|.++
T Consensus 161 --~~iv~~Ll~~ 170 (664)
T PTZ00322 161 --REVVQLLSRH 170 (664)
T ss_pred --HHHHHHHHhC
Confidence 5999999887
No 86
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=99.38 E-value=4.7e-12 Score=95.49 Aligned_cols=102 Identities=32% Similarity=0.448 Sum_probs=89.3
Q ss_pred hhhhhcccCCCCCCc------HHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCC
Q 030377 23 RFFRSVIDTDDRGWT------PLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGA 96 (178)
Q Consensus 23 ~~~~~~~~~~~~g~t------~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~ 96 (178)
.|.....-+|.+|.+ .||..++.|+.++.-.|+..|+++|+-+ ...|.||||+|++.|+...+++|.-+|+
T Consensus 115 tFv~~~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~h---pekg~TpLHvAAk~Gq~~Q~ElL~vYGA 191 (669)
T KOG0818|consen 115 AFVHRLPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFH---PEKGNTPLHVAAKAGQILQAELLAVYGA 191 (669)
T ss_pred eeeccCCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCC---cccCCchhHHHHhccchhhhhHHhhccC
Confidence 344445556777665 4999999999999999999999999875 6789999999999999999999999999
Q ss_pred CCccccCCCCCCcHHHHHHHhCCHHHHHHHHHc
Q 030377 97 DIDARTKGACGWTPLHTAAKERKKEAVRFLIEN 129 (178)
Q Consensus 97 ~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~ 129 (178)
++...+.+ |.||+.+|-..|+.++++-|++.
T Consensus 192 D~~a~d~~--GmtP~~~AR~~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 192 DPGAQDSS--GMTPVDYARQGGHHELAERLVEI 222 (669)
T ss_pred CCCCCCCC--CCcHHHHHHhcCchHHHHHHHHH
Confidence 99999998 99999999999998888777643
No 87
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.34 E-value=3.5e-12 Score=96.94 Aligned_cols=98 Identities=31% Similarity=0.374 Sum_probs=84.8
Q ss_pred hhcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCC
Q 030377 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (178)
Q Consensus 26 ~~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~ 105 (178)
.+..+.+..|-|+||-|+..|+.++|+||+++|+++|.. |.+||||||.|+..++..+++.|+..|+-+-..+- .
T Consensus 574 ~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~----DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsTl-S 648 (752)
T KOG0515|consen 574 TDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAA----DSDGWTPLHCAASCNNVPMCKQLVESGAAVFASTL-S 648 (752)
T ss_pred cCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCc----cCCCCchhhhhhhcCchHHHHHHHhccceEEeeec-c
Confidence 456678889999999999999999999999999999998 89999999999999999999999999987654432 2
Q ss_pred CCCcHHHHH--HHhCCHHHHHHHHH
Q 030377 106 CGWTPLHTA--AKERKKEAVRFLIE 128 (178)
Q Consensus 106 ~g~t~l~~a--~~~~~~~i~~~Ll~ 128 (178)
++.|+..-+ -..|..+|.++|..
T Consensus 649 DmeTa~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 649 DMETAAEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred cccchhhhcchhhhhHHHHHHHHHH
Confidence 378888876 35678899999874
No 88
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.23 E-value=9.3e-12 Score=101.91 Aligned_cols=130 Identities=25% Similarity=0.284 Sum_probs=81.9
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHH
Q 030377 33 DRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLH 112 (178)
Q Consensus 33 ~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~ 112 (178)
.+-.|+|..||..|+.|.++.|+.+|+++..+ +..|.+||.+|+..|+..+|+.|+.+.++++.+. ++.+.|+|.
T Consensus 755 ~n~~t~LT~acaggh~e~vellv~rganiehr----dkkgf~plImaatagh~tvV~~llk~ha~veaQs-drtkdt~lS 829 (2131)
T KOG4369|consen 755 PNIKTNLTSACAGGHREEVELLVVRGANIEHR----DKKGFVPLIMAATAGHITVVQDLLKAHADVEAQS-DRTKDTMLS 829 (2131)
T ss_pred ccccccccccccCccHHHHHHHHHhccccccc----ccccchhhhhhcccCchHHHHHHHhhhhhhhhhc-ccccCceEE
Confidence 34456667777777777777777776666665 5666677777766667666666666666665442 222666777
Q ss_pred HHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHHhhhhcC
Q 030377 113 TAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAGE 171 (178)
Q Consensus 113 ~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~~ 171 (178)
+||..|..+++++|+..|++- .-++....|||..|..-+ +.++++.|+...++..
T Consensus 830 lacsggr~~vvelLl~~gank--ehrnvsDytPlsla~Sgg--y~~iI~~llS~GseIn 884 (2131)
T KOG4369|consen 830 LACSGGRTRVVELLLNAGANK--EHRNVSDYTPLSLARSGG--YTKIIHALLSSGSEIN 884 (2131)
T ss_pred EecCCCcchHHHHHHHhhccc--cccchhhcCchhhhcCcc--hHHHHHHHhhcccccc
Confidence 777777777777777666644 445555566766665443 3466666666655543
No 89
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.21 E-value=1.3e-11 Score=101.06 Aligned_cols=154 Identities=22% Similarity=0.284 Sum_probs=129.5
Q ss_pred CcchhhhhhhHHhhh-------hhcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcC
Q 030377 11 GPFTLQRKASRKRFF-------RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGG 83 (178)
Q Consensus 11 ~~~~~~~~~~~~~~~-------~~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~ 83 (178)
+++.......+++.. .++.-+|+.|.+||.+|+-.|+..+|..|+...++++... +..+.|+|.+||..|
T Consensus 759 t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQs---drtkdt~lSlacsgg 835 (2131)
T KOG4369|consen 759 TNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQS---DRTKDTMLSLACSGG 835 (2131)
T ss_pred ccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhc---ccccCceEEEecCCC
Confidence 444544444444333 3456689999999999999999999999999999988765 888999999999999
Q ss_pred CHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHH
Q 030377 84 HLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQ 163 (178)
Q Consensus 84 ~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l 163 (178)
..+.+++|+..|++-..++-. ..|||.+|...|..++++.|++.|..++...-...|-.||..|..++.- +..+.|
T Consensus 836 r~~vvelLl~~gankehrnvs--DytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~--~at~~l 911 (2131)
T KOG4369|consen 836 RTRVVELLLNAGANKEHRNVS--DYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQ--AATLSL 911 (2131)
T ss_pred cchHHHHHHHhhccccccchh--hcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhcccc--HHHHHH
Confidence 999999999999877666555 7899999999999999999999999887777788889999999998875 888888
Q ss_pred HHhhhhcC
Q 030377 164 RESFSAGE 171 (178)
Q Consensus 164 ~~~~~~~~ 171 (178)
++..++..
T Consensus 912 l~~gsdiN 919 (2131)
T KOG4369|consen 912 LQPGSDIN 919 (2131)
T ss_pred hcccchhc
Confidence 87666553
No 90
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=99.13 E-value=5.2e-10 Score=86.06 Aligned_cols=117 Identities=26% Similarity=0.304 Sum_probs=88.4
Q ss_pred hhhhhhHHhhhhhcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 030377 15 LQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLER 94 (178)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~ 94 (178)
+..|..-+.|+..+...+..--.-|--|....+...+-.|+.+|....+...-.+..|+|+||+|++.|+..+..+|+.+
T Consensus 604 Ir~KYeqklFLaPl~~te~~lgqqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWy 683 (749)
T KOG0705|consen 604 IRAKYEQKLFLAPLPCTEEPLGQQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWY 683 (749)
T ss_pred HHHHHHHHhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHh
Confidence 33444444455444443433233466677777888889999998543322111256789999999999999999999999
Q ss_pred CCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCC
Q 030377 95 GADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFL 133 (178)
Q Consensus 95 ~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~ 133 (178)
|+++...|.. |+|+|.||-+.|..+|+.+|+++|+..
T Consensus 684 g~dv~~rda~--g~t~l~yar~a~sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 684 GVDVMARDAH--GRTALFYARQAGSQECIDVLLQYGCPD 720 (749)
T ss_pred CccceecccC--CchhhhhHhhcccHHHHHHHHHcCCCc
Confidence 9999988877 999999999999999999999999943
No 91
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.08 E-value=2e-10 Score=86.49 Aligned_cols=94 Identities=31% Similarity=0.470 Sum_probs=85.1
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHH-cCCCCccccCCCCCCcH
Q 030377 32 DDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLE-RGADIDARTKGACGWTP 110 (178)
Q Consensus 32 ~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~-~~~~~~~~~~~~~g~t~ 110 (178)
+.++...+++|++.|+...++.+.-.|.|++.. |...+|+||+|+..|+.+++++|+. .+.+++..|++ |+||
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~----DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw--~rtP 576 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETK----DYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRW--GRTP 576 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhccccccc----ccccchhheeecccCceeHHHHHHHHHcCCCChhhcc--CCCc
Confidence 345567899999999999999999999999988 8899999999999999999999998 57888889998 9999
Q ss_pred HHHHHHhCCHHHHHHHHHcCC
Q 030377 111 LHTAAKERKKEAVRFLIENGA 131 (178)
Q Consensus 111 l~~a~~~~~~~i~~~Ll~~g~ 131 (178)
|.-|...++.+++++|-+.-.
T Consensus 577 lDdA~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 577 LDDAKHFKHKEVVKLLEEAQY 597 (622)
T ss_pred chHhHhcCcHHHHHHHHHHhc
Confidence 999999999999999987654
No 92
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.06 E-value=6e-11 Score=94.67 Aligned_cols=132 Identities=22% Similarity=0.273 Sum_probs=90.3
Q ss_pred hhcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCC
Q 030377 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (178)
Q Consensus 26 ~~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~ 105 (178)
...+.+|..|+++||.|+..+..+++++|+++|.+++..+ ...|+||||.|+.+|+.+++-+|+.+|....++|.+
T Consensus 43 n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD---~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dke- 118 (1267)
T KOG0783|consen 43 NLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQD---EESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKE- 118 (1267)
T ss_pred hhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeecc---ccccchHhhHhhhhchHHHHHHHHhcCCceEEeccc-
Confidence 3356788889999999999988899999999998888875 567889999999999999999999998888888888
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHH
Q 030377 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRE 165 (178)
Q Consensus 106 ~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~ 165 (178)
|.+||..-++-....+ ....+...++-.. ..+.+.-|-++........|.+.++..
T Consensus 119 -glsplq~~~r~~~~~i-~~~~d~pndvy~w--G~N~N~tLGign~~~~~~Pe~Vdlf~~ 174 (1267)
T KOG0783|consen 119 -GLSPLQFLSRVLSSTI-HPVLDLPNDVYGW--GTNVNNTLGIGNGKEPSSPERVDLFKT 174 (1267)
T ss_pred -CCCHHHHHhhcccccc-ccccCCccceeEe--cccccccccccCCCCCCChHHhHHHHh
Confidence 8888887665322211 1112222222111 111123355555544455677777664
No 93
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.02 E-value=2.9e-10 Score=90.91 Aligned_cols=80 Identities=26% Similarity=0.407 Sum_probs=75.6
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccc
Q 030377 69 KSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHY 148 (178)
Q Consensus 69 ~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~ 148 (178)
|..|+++||+++..+..+++++|+.+|+++..+|... |+||||.|+..|+++|+..|+.+|+.+ .+.|.+|..||+.
T Consensus 49 D~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ES-G~taLHRaiyyG~idca~lLL~~g~SL--~i~Dkeglsplq~ 125 (1267)
T KOG0783|consen 49 DRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEES-GYTALHRAIYYGNIDCASLLLSKGRSL--RIKDKEGLSPLQF 125 (1267)
T ss_pred HhhccceeeeeeccchhHHHHHHHhcCceeeeccccc-cchHhhHhhhhchHHHHHHHHhcCCce--EEecccCCCHHHH
Confidence 7899999999999999999999999999999999877 999999999999999999999999977 9999999999997
Q ss_pred ccc
Q 030377 149 CPS 151 (178)
Q Consensus 149 a~~ 151 (178)
-..
T Consensus 126 ~~r 128 (1267)
T KOG0783|consen 126 LSR 128 (1267)
T ss_pred Hhh
Confidence 654
No 94
>PF13606 Ank_3: Ankyrin repeat
Probab=98.96 E-value=1.4e-09 Score=51.82 Aligned_cols=27 Identities=48% Similarity=0.706 Sum_probs=24.1
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCC
Q 030377 107 GWTPLHTAAKERKKEAVRFLIENGAFL 133 (178)
Q Consensus 107 g~t~l~~a~~~~~~~i~~~Ll~~g~~~ 133 (178)
|+||||+|++.|+.+++++|++.|+++
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadv 28 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADV 28 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 889999999999999999999998876
No 95
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.94 E-value=4e-09 Score=80.06 Aligned_cols=88 Identities=31% Similarity=0.307 Sum_probs=76.3
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccc
Q 030377 75 PLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEW 154 (178)
Q Consensus 75 ~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~ 154 (178)
-||.+++.++.+..--|+..|+++|....++ |.||||.|+..|+..-+++|+-+|+|+ ...|.+|.||+.+|.+.|+
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpek-g~TpLHvAAk~Gq~~Q~ElL~vYGAD~--~a~d~~GmtP~~~AR~~gH 212 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEK-GNTPLHVAAKAGQILQAELLAVYGADP--GAQDSSGMTPVDYARQGGH 212 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCccc-CCchhHHHHhccchhhhhHHhhccCCC--CCCCCCCCcHHHHHHhcCc
Confidence 5788899999998888889999999988877 999999999999999999999999998 8899999999999999887
Q ss_pred c--HHHHHHHHHH
Q 030377 155 A--YEEMMRFQRE 165 (178)
Q Consensus 155 ~--~~e~~~~l~~ 165 (178)
+ .+.++++..+
T Consensus 213 ~~laeRl~e~~y~ 225 (669)
T KOG0818|consen 213 HELAERLVEIQYE 225 (669)
T ss_pred hHHHHHHHHHHHH
Confidence 7 3344444443
No 96
>PF13606 Ank_3: Ankyrin repeat
Probab=98.93 E-value=1.9e-09 Score=51.40 Aligned_cols=29 Identities=55% Similarity=0.922 Sum_probs=18.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 030377 34 RGWTPLHIGARKGDIKLVKQLLDEGMDVN 62 (178)
Q Consensus 34 ~g~t~l~~A~~~~~~~~v~~ll~~~~~~~ 62 (178)
+|+||||+||+.|+.+++++|+++|+++|
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 35666666666666666666666666654
No 97
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.86 E-value=1.2e-08 Score=78.91 Aligned_cols=117 Identities=21% Similarity=0.325 Sum_probs=95.9
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCC--CccccCCCCCCcHHHHHHH
Q 030377 39 LHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGAD--IDARTKGACGWTPLHTAAK 116 (178)
Q Consensus 39 l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~--~~~~~~~~~g~t~l~~a~~ 116 (178)
+.-|+..+++--+.....+|.++-.. +.+..+.||+|+..|+-++|++++.+|.. +++.+.. |.|+||.|+.
T Consensus 870 il~av~~~D~~klqE~h~~gg~ll~~----~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~--get~lhkaa~ 943 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGSLLIQ----GPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADET--GETALHKAAC 943 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCceEee----CcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhh--hhHHHHHHHH
Confidence 45566666766666667778777766 77788999999999999999999998754 4566666 9999999999
Q ss_pred hCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHHH
Q 030377 117 ERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRE 165 (178)
Q Consensus 117 ~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~ 165 (178)
.++-.+.++|++.|+.+ ..+|..|.||-.-|-+.+.- ++..+|..
T Consensus 944 ~~~r~vc~~lvdagasl--~ktd~kg~tp~eraqqa~d~--dlaayle~ 988 (1004)
T KOG0782|consen 944 QRNRAVCQLLVDAGASL--RKTDSKGKTPQERAQQAGDP--DLAAYLES 988 (1004)
T ss_pred hcchHHHHHHHhcchhh--eecccCCCChHHHHHhcCCc--hHHHHHhh
Confidence 99999999999999987 77899999999988776654 77777764
No 98
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.85 E-value=7.3e-09 Score=50.62 Aligned_cols=27 Identities=41% Similarity=0.660 Sum_probs=21.3
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCC
Q 030377 107 GWTPLHTAAKERKKEAVRFLIENGAFL 133 (178)
Q Consensus 107 g~t~l~~a~~~~~~~i~~~Ll~~g~~~ 133 (178)
|.||||+|+..|+.+++++|++.|+++
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~ 28 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADI 28 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCT
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCC
Confidence 777888888888888888888877766
No 99
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.80 E-value=2.3e-08 Score=76.47 Aligned_cols=87 Identities=31% Similarity=0.555 Sum_probs=69.1
Q ss_pred cHHHHHHHcCCHHHHHHHHHcC--CCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHH
Q 030377 37 TPLHIGARKGDIKLVKQLLDEG--MDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTA 114 (178)
Q Consensus 37 t~l~~A~~~~~~~~v~~ll~~~--~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a 114 (178)
.++|+++...+.+.+...+... ..++.. +..|.||||+|+..|+.+.++.|+..|+++..++.. |++|||.|
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~----D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~--gWs~L~EA 95 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRR----DPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNE--GWSPLHEA 95 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccc----cCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccc--cccHHHHH
Confidence 4588888888887776655433 334444 677899999999999999999999999999888887 99999999
Q ss_pred HHhCCHHHHHHHHHc
Q 030377 115 AKERKKEAVRFLIEN 129 (178)
Q Consensus 115 ~~~~~~~i~~~Ll~~ 129 (178)
+..|+.+++..++.+
T Consensus 96 v~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 96 VSTGNEQIITEVLRH 110 (560)
T ss_pred HHcCCHHHHHHHHHH
Confidence 999998887776654
No 100
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.75 E-value=1.7e-08 Score=76.31 Aligned_cols=94 Identities=24% Similarity=0.361 Sum_probs=82.0
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCccccc
Q 030377 70 SKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYC 149 (178)
Q Consensus 70 ~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a 149 (178)
..+...+++|+..|....++-+...|.+.+..|.+ .+|+||.|+..|+.+++++|++... ++....|..|.|||.-|
T Consensus 504 ~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD--~RTaLHvAAaEG~v~v~kfl~~~~k-v~~~~kDRw~rtPlDdA 580 (622)
T KOG0506|consen 504 NDTVINVMYAAKNGDLSALRRFALQGMDLETKDYD--DRTALHVAAAEGHVEVVKFLLNACK-VDPDPKDRWGRTPLDDA 580 (622)
T ss_pred ccchhhhhhhhhcCCHHHHHHHHHhcccccccccc--cchhheeecccCceeHHHHHHHHHc-CCCChhhccCCCcchHh
Confidence 34567899999999999999999999999999988 9999999999999999999998844 45588999999999999
Q ss_pred ccccccHHHHHHHHHHhhh
Q 030377 150 PSLEWAYEEMMRFQRESFS 168 (178)
Q Consensus 150 ~~~~~~~~e~~~~l~~~~~ 168 (178)
..-++ .+++++|.+.-.
T Consensus 581 ~~F~h--~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 581 KHFKH--KEVVKLLEEAQY 597 (622)
T ss_pred HhcCc--HHHHHHHHHHhc
Confidence 76544 699999988644
No 101
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.74 E-value=2.7e-08 Score=48.58 Aligned_cols=30 Identities=47% Similarity=0.757 Sum_probs=17.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCcccc
Q 030377 35 GWTPLHIGARKGDIKLVKQLLDEGMDVNVA 64 (178)
Q Consensus 35 g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~ 64 (178)
|+||||+|+..|+.+++++|+++|++++.+
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~ 31 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADINAR 31 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCTTCB
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCCCCC
Confidence 555555555555555555555555555543
No 102
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.68 E-value=5.9e-08 Score=75.19 Aligned_cols=100 Identities=26% Similarity=0.371 Sum_probs=87.3
Q ss_pred hhcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC--ccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccC
Q 030377 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMD--VNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTK 103 (178)
Q Consensus 26 ~~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~--~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~ 103 (178)
-++..++.+-.+.||+|+..|+-++|++++++|.. ++.. +..|.|+||-|+..++..++.+|+..|+.+...|.
T Consensus 890 g~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~----de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~ 965 (1004)
T KOG0782|consen 890 GSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMA----DETGETALHKAACQRNRAVCQLLVDAGASLRKTDS 965 (1004)
T ss_pred CceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHH----hhhhhHHHHHHHHhcchHHHHHHHhcchhheeccc
Confidence 34667888889999999999999999999999854 2222 78899999999999999999999999999887777
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHcCC
Q 030377 104 GACGWTPLHTAAKERKKEAVRFLIENGA 131 (178)
Q Consensus 104 ~~~g~t~l~~a~~~~~~~i~~~Ll~~g~ 131 (178)
. |.||-..|-..|+.+.+.+|-.+..
T Consensus 966 k--g~tp~eraqqa~d~dlaayle~rq~ 991 (1004)
T KOG0782|consen 966 K--GKTPQERAQQAGDPDLAAYLESRQN 991 (1004)
T ss_pred C--CCChHHHHHhcCCchHHHHHhhhhc
Confidence 6 9999999999999999999976643
No 103
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.54 E-value=4.6e-07 Score=61.05 Aligned_cols=84 Identities=23% Similarity=0.317 Sum_probs=69.4
Q ss_pred hcccCCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCC
Q 030377 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLDEG-MDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (178)
Q Consensus 27 ~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~-~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~ 105 (178)
+++.+|..|||++++|++.|+.+.+.+|+.+| +.+.+. +..+.+++.+|-+.|..+.++.|.++..+-.-.+...
T Consensus 4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~----d~ssldaaqlaek~g~~~fvh~lfe~~~ets~p~nss 79 (223)
T KOG2384|consen 4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVT----DESSLDAAQLAEKGGAQAFVHSLFENDRETSHPMNSS 79 (223)
T ss_pred CccchhhhcchHHHHHhhhcchhHHHHHhccCccccccc----ccccchHHHHHHhcChHHHHHHHHHHhccCCCcccCC
Confidence 57889999999999999999999999999999 888888 8899999999999999999999988755544444443
Q ss_pred CCCcHHHHH
Q 030377 106 CGWTPLHTA 114 (178)
Q Consensus 106 ~g~t~l~~a 114 (178)
.+.++..+-
T Consensus 80 ~~e~lfyCE 88 (223)
T KOG2384|consen 80 RDEALFYCE 88 (223)
T ss_pred CCCccchhh
Confidence 355555443
No 104
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.54 E-value=4.7e-07 Score=67.04 Aligned_cols=125 Identities=26% Similarity=0.304 Sum_probs=83.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHH
Q 030377 36 WTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAA 115 (178)
Q Consensus 36 ~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~ 115 (178)
.--|..||+.|+.+.|++|++.|.++|.. +.....||.+|+..||.+.+++|+.+|+--.....+ |. -.||++
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~v----D~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~--G~-RC~Yga 109 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAV----DRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFD--GD-RCHYGA 109 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchh----hcccccHHHHHHHcCcHHHHHHHHHcCCcccccccC--cc-hhhhhh
Confidence 45689999999999999999999999988 788899999999999999999999999866544443 54 344444
Q ss_pred HhCCH-------HHHHHHHHcCCCCCCCCCCCCCCCcccccc------cccccHHHHHHHHHHhhhh
Q 030377 116 KERKK-------EAVRFLIENGAFLPDDINDSRFNPPLHYCP------SLEWAYEEMMRFQRESFSA 169 (178)
Q Consensus 116 ~~~~~-------~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~------~~~~~~~e~~~~l~~~~~~ 169 (178)
-+.++ ++.+.+-.+.. +...++....+|.|+++. +.|. +...-+|+.+.++.
T Consensus 110 Lnd~IR~mllsydi~KA~d~~qP-~aahi~s~l~dt~l~~~~di~f~~q~g~-~f~ahkfll~arSs 174 (516)
T KOG0511|consen 110 LNDRIRRMLLSYDILKAFDARQP-PAAHIQSSLRDTFLGCCHDIDFLQQEGA-NFDAHKFLLEARSS 174 (516)
T ss_pred hhHHHHHHHHHHHHHHHhhccCC-cchHHHHHhhccccccccchHHHhhccc-cccHHHHHHHhhhc
Confidence 33322 33333322222 222444444556666554 2222 23455666665543
No 105
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.53 E-value=2.5e-07 Score=71.77 Aligned_cols=91 Identities=21% Similarity=0.200 Sum_probs=71.7
Q ss_pred HHHHHhcCCHHHHHHHHHcCCC--CccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCccccccccc
Q 030377 76 LHLAAQGGHLEVMDVLLERGAD--IDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLE 153 (178)
Q Consensus 76 l~~a~~~~~~~~~~~L~~~~~~--~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~ 153 (178)
|..|........+-+|+.+|.. ++....+..|+|+||+||+.|++.+.++|+-+|+|+ ...|.+|.|+|.||.+.+
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv--~~rda~g~t~l~yar~a~ 705 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDV--MARDAHGRTALFYARQAG 705 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccc--eecccCCchhhhhHhhcc
Confidence 4455556667778888888764 333334444899999999999999999999999999 889999999999999876
Q ss_pred ccHHHHHHHHHHhhhhc
Q 030377 154 WAYEEMMRFQRESFSAG 170 (178)
Q Consensus 154 ~~~~e~~~~l~~~~~~~ 170 (178)
. .|.+..|.++.-.+
T Consensus 706 s--qec~d~llq~gcp~ 720 (749)
T KOG0705|consen 706 S--QECIDVLLQYGCPD 720 (749)
T ss_pred c--HHHHHHHHHcCCCc
Confidence 5 48888887765433
No 106
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.52 E-value=2.3e-07 Score=71.21 Aligned_cols=78 Identities=33% Similarity=0.395 Sum_probs=63.2
Q ss_pred cHHHHHHhcCCHHHHHH-HHH-cCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCccccccc
Q 030377 74 TPLHLAAQGGHLEVMDV-LLE-RGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPS 151 (178)
Q Consensus 74 t~l~~a~~~~~~~~~~~-L~~-~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~ 151 (178)
.|+|+++.....+-... |.. .+..++..+.. |+||||+|++.|+.+.+..|+..|+++ ..+|.+|.+|||-|+.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~--g~TpLhlAV~Lg~~~~a~~Ll~a~Adv--~~kN~~gWs~L~EAv~ 97 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPP--GRTPLHLAVRLGHVEAARILLSAGADV--SIKNNEGWSPLHEAVS 97 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCC--CCccHHHHHHhcCHHHHHHHHhcCCCc--cccccccccHHHHHHH
Confidence 45888888776654433 332 34566666666 999999999999999999999999988 8899999999999998
Q ss_pred cccc
Q 030377 152 LEWA 155 (178)
Q Consensus 152 ~~~~ 155 (178)
.|+-
T Consensus 98 ~g~~ 101 (560)
T KOG0522|consen 98 TGNE 101 (560)
T ss_pred cCCH
Confidence 8764
No 107
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.48 E-value=1.1e-06 Score=65.15 Aligned_cols=71 Identities=23% Similarity=0.281 Sum_probs=61.3
Q ss_pred CcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCccc
Q 030377 73 VTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLH 147 (178)
Q Consensus 73 ~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~ 147 (178)
..-|..||+.|..+.++.|++.|.++|..++. ..+||.+|+-.||..++++|+++|+-- ..-...|...+.
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~f--D~spL~lAsLcGHe~vvklLLenGAiC--~rdtf~G~RC~Y 107 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRF--DSSPLYLASLCGHEDVVKLLLENGAIC--SRDTFDGDRCHY 107 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcc--cccHHHHHHHcCcHHHHHHHHHcCCcc--cccccCcchhhh
Confidence 45689999999999999999999999999998 899999999999999999999999954 334456665443
No 108
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.37 E-value=5.3e-07 Score=73.98 Aligned_cols=85 Identities=40% Similarity=0.551 Sum_probs=55.9
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHH
Q 030377 33 DRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLH 112 (178)
Q Consensus 33 ~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~ 112 (178)
..|.++||.|+..+...++++|+++|+++|.. +..|.+|+|.+...|+...+..++.+|++.+..+.+ |.+|++
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~----d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~--~~~~l~ 727 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNAL----DSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPD--GKLPLD 727 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcchhh----hccCCCcchhhhhhcccchhhhhccccccccccCcc--Ccchhh
Confidence 34566677777777776777777777666666 666667777777777766666666666666666666 666777
Q ss_pred HHHHhCCHHHH
Q 030377 113 TAAKERKKEAV 123 (178)
Q Consensus 113 ~a~~~~~~~i~ 123 (178)
+|....+-+++
T Consensus 728 ~a~~~~~~d~~ 738 (785)
T KOG0521|consen 728 IAMEAANADIV 738 (785)
T ss_pred HHhhhccccHH
Confidence 66555444443
No 109
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.29 E-value=3.1e-06 Score=68.49 Aligned_cols=97 Identities=25% Similarity=0.289 Sum_probs=78.9
Q ss_pred hhcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCc------
Q 030377 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADID------ 99 (178)
Q Consensus 26 ~~~~~~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~------ 99 (178)
.+++..|.-|+++++.|+...+.++.++|++..... . .+|.+|+..+..++|++++.+.....
T Consensus 53 lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--g---------dALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~ 121 (822)
T KOG3609|consen 53 LNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--G---------DALLLAIAVGSVPLVELLLVHFVDAPYLERSG 121 (822)
T ss_pred cchhccChHhhhceecccccccHHHHHHHhcCcccc--c---------hHHHHHHHHHHHHHHHHHHhcccccchhcccc
Confidence 567888999999999999999999999999886443 2 58999999999999999998633221
Q ss_pred --cccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCC
Q 030377 100 --ARTKGACGWTPLHTAAKERKKEAVRFLIENGAFL 133 (178)
Q Consensus 100 --~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~ 133 (178)
......-+.||+..|+..++.||+++|+.+|+.+
T Consensus 122 d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i 157 (822)
T KOG3609|consen 122 DANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCI 157 (822)
T ss_pred ccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCC
Confidence 0111222789999999999999999999999976
No 110
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.24 E-value=2.9e-06 Score=70.00 Aligned_cols=128 Identities=22% Similarity=0.219 Sum_probs=93.6
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHH-cCCCCccccCCCCC
Q 030377 30 DTDDRGWTPLHIGARKGDIKLVKQLLDE-GMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLE-RGADIDARTKGACG 107 (178)
Q Consensus 30 ~~~~~g~t~l~~A~~~~~~~~v~~ll~~-~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~-~~~~~~~~~~~~~g 107 (178)
.....|++.+|+++..+....+..+++- |...... +..|...+|. |..++.+++-+++. .|..++..|.. |
T Consensus 569 ~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~el----d~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~--G 641 (975)
T KOG0520|consen 569 SVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLEL----DRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRN--G 641 (975)
T ss_pred cCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhh----cccCCChhhH-hhhcCCceeEEEEeecccccccccCC--C
Confidence 3456789999999999999999998885 4333322 4455556666 55555666655544 77888888888 9
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCC----CCCCCCCCCCCcccccccccccHHHHHHHHHHh
Q 030377 108 WTPLHTAAKERKKEAVRFLIENGAFL----PDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (178)
Q Consensus 108 ~t~l~~a~~~~~~~i~~~Ll~~g~~~----~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~ 166 (178)
+||||+|.+.|+..++..|++.|++. ++......|.|+...|.+.+. ..+-.+|.+.
T Consensus 642 ~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~--~gia~~lse~ 702 (975)
T KOG0520|consen 642 WTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGH--KGIAGYLSEK 702 (975)
T ss_pred CcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccc--cchHHHHhhh
Confidence 99999999999999999999887743 234445567888888876654 4777777664
No 111
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.23 E-value=1.3e-06 Score=71.69 Aligned_cols=89 Identities=27% Similarity=0.325 Sum_probs=78.1
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccc
Q 030377 71 KGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCP 150 (178)
Q Consensus 71 ~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~ 150 (178)
.|.+++|.|+..+..-++++|+.+|++++..+.. |++|+|.+...|+...+..|+++|++. ...+..|.+|+.+|.
T Consensus 655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~--g~~plh~~~~~g~~~~~~~ll~~~a~~--~a~~~~~~~~l~~a~ 730 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSGAVELLLQNGADVNALDSK--GRTPLHHATASGHTSIACLLLKRGADP--NAFDPDGKLPLDIAM 730 (785)
T ss_pred cccchhhhhhccchHHHHHHHHhcCCcchhhhcc--CCCcchhhhhhcccchhhhhccccccc--cccCccCcchhhHHh
Confidence 4679999999999999999999999999999888 999999999999999999999999988 888999999999997
Q ss_pred cccccHHHHHHHH
Q 030377 151 SLEWAYEEMMRFQ 163 (178)
Q Consensus 151 ~~~~~~~e~~~~l 163 (178)
...+.....+..+
T Consensus 731 ~~~~~d~~~l~~l 743 (785)
T KOG0521|consen 731 EAANADIVLLLRL 743 (785)
T ss_pred hhccccHHHHHhh
Confidence 6654433444333
No 112
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.18 E-value=1.3e-05 Score=54.27 Aligned_cols=83 Identities=27% Similarity=0.246 Sum_probs=67.5
Q ss_pred CCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcC-CCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCC
Q 030377 59 MDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERG-ADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDI 137 (178)
Q Consensus 59 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~-~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~ 137 (178)
.++|.+ |..|||+++.|+..|+.+.+.+|+.+| +.+...+.. |.+++-+|-..|..++++.|.+...+-....
T Consensus 3 ~~in~r----D~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~s--sldaaqlaek~g~~~fvh~lfe~~~ets~p~ 76 (223)
T KOG2384|consen 3 GNINAR----DAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDES--SLDAAQLAEKGGAQAFVHSLFENDRETSHPM 76 (223)
T ss_pred CCccch----hhhcchHHHHHhhhcchhHHHHHhccCcccccccccc--cchHHHHHHhcChHHHHHHHHHHhccCCCcc
Confidence 467777 899999999999999999999999999 788887777 9999999999999999999998866543333
Q ss_pred CCCCCCCccc
Q 030377 138 NDSRFNPPLH 147 (178)
Q Consensus 138 ~~~~g~t~l~ 147 (178)
....+.+++.
T Consensus 77 nss~~e~lfy 86 (223)
T KOG2384|consen 77 NSSRDEALFY 86 (223)
T ss_pred cCCCCCccch
Confidence 3444444443
No 113
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.71 E-value=0.0001 Score=60.02 Aligned_cols=122 Identities=20% Similarity=0.192 Sum_probs=92.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC----ccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCc
Q 030377 34 RGWTPLHIGARKGDIKLVKQLLDEGMD----VNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWT 109 (178)
Q Consensus 34 ~g~t~l~~A~~~~~~~~v~~ll~~~~~----~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t 109 (178)
.+.--+-.|+..|+...|+.+++.... +|.. |.-|+++|+.|+...+.++.++|++.+... ..
T Consensus 24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~----d~lGr~al~iai~nenle~~eLLl~~~~~~---------gd 90 (822)
T KOG3609|consen 24 EGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCR----DPLGRLALHIAIDNENLELQELLLDTSSEE---------GD 90 (822)
T ss_pred hhhHHHHHHHHcCChHHHHHHHHhccccccchhcc----ChHhhhceecccccccHHHHHHHhcCcccc---------ch
Confidence 444557789999999999999986543 4444 778999999999999999999999976544 25
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCC-------CC-CCCCCCCCcccccccccccHHHHHHHHHHhhhhc
Q 030377 110 PLHTAAKERKKEAVRFLIENGAFLP-------DD-INDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAG 170 (178)
Q Consensus 110 ~l~~a~~~~~~~i~~~Ll~~g~~~~-------~~-~~~~~g~t~l~~a~~~~~~~~e~~~~l~~~~~~~ 170 (178)
+|.+|+..|..+++++++....... .+ ..=..+-||+..|+...+ -|++++|.+.....
T Consensus 91 ALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~Nn--yEil~~Ll~kg~~i 157 (822)
T KOG3609|consen 91 ALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNN--FEILQCLLTRGHCI 157 (822)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcc--hHHHHHHHHcCCCC
Confidence 9999999999999999998755320 00 111223599999986644 59999999866543
No 114
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.49 E-value=0.00057 Score=52.81 Aligned_cols=64 Identities=19% Similarity=0.204 Sum_probs=47.3
Q ss_pred HHHHHHHHHcCCCCccc----cCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccc
Q 030377 85 LEVMDVLLERGADIDAR----TKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCP 150 (178)
Q Consensus 85 ~~~~~~L~~~~~~~~~~----~~~~~g~t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~ 150 (178)
...+++|..++.+.|.. ..+..-.|+||+|+..|.-+++.+||+.|+|+ ...|..|.||...+.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp--~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDP--STKDGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCc--hhcccCCCCcccccc
Confidence 45677787776555322 22222558899999999999999999998877 778888889888875
No 115
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.38 E-value=0.00048 Score=31.14 Aligned_cols=27 Identities=52% Similarity=0.977 Sum_probs=16.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCc
Q 030377 35 GWTPLHIGARKGDIKLVKQLLDEGMDV 61 (178)
Q Consensus 35 g~t~l~~A~~~~~~~~v~~ll~~~~~~ 61 (178)
|.+++|+|+..++.++++.+++.+.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 456666666666666666666655443
No 116
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.35 E-value=0.00021 Score=59.48 Aligned_cols=95 Identities=26% Similarity=0.331 Sum_probs=70.8
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCc----cccCCCC
Q 030377 31 TDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADID----ARTKGAC 106 (178)
Q Consensus 31 ~~~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~----~~~~~~~ 106 (178)
.|.+|...+|+++..|-.-.+....-.|..++.+ +..|+||||+|+.+|+..++..|+..|++.. .......
T Consensus 604 ld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~----D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~ 679 (975)
T KOG0520|consen 604 LDRDGQGVIHFCAALGYEWAFLPISADGVAIDIR----DRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPG 679 (975)
T ss_pred hcccCCChhhHhhhcCCceeEEEEeecccccccc----cCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCC
Confidence 4677888888865555444444444566777777 8999999999999999999999998765432 2222223
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHc
Q 030377 107 GWTPLHTAAKERKKEAVRFLIEN 129 (178)
Q Consensus 107 g~t~l~~a~~~~~~~i~~~Ll~~ 129 (178)
|.|+...|...|+..+..+|-+.
T Consensus 680 g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 680 GKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred CCchhhhhhcccccchHHHHhhh
Confidence 88999999999998888887665
No 117
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.31 E-value=0.00063 Score=30.72 Aligned_cols=27 Identities=44% Similarity=0.714 Sum_probs=22.5
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCC
Q 030377 107 GWTPLHTAAKERKKEAVRFLIENGAFL 133 (178)
Q Consensus 107 g~t~l~~a~~~~~~~i~~~Ll~~g~~~ 133 (178)
|.||+|+|+..++.++++.|++.|.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 678888888888888888888887754
No 118
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.15 E-value=0.00088 Score=51.83 Aligned_cols=76 Identities=24% Similarity=0.290 Sum_probs=60.0
Q ss_pred CHHHHHHHHHcCCCccccccCC--CCCCCcHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHH
Q 030377 47 DIKLVKQLLDEGMDVNVAAWGP--KSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVR 124 (178)
Q Consensus 47 ~~~~v~~ll~~~~~~~~~~~~~--~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~ 124 (178)
-...+++|.+++.+.|...... +....|+||+|+..|...++.+|+..|+|+.+.+.. |.||..++. +.++-.
T Consensus 403 ~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~--Grtpy~ls~---nkdVk~ 477 (591)
T KOG2505|consen 403 EPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGA--GRTPYSLSA---NKDVKS 477 (591)
T ss_pred chhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccC--CCCcccccc---cHHHHH
Confidence 3677889999888877654321 334669999999999999999999999999999888 999999876 445544
Q ss_pred HHH
Q 030377 125 FLI 127 (178)
Q Consensus 125 ~Ll 127 (178)
.++
T Consensus 478 ~F~ 480 (591)
T KOG2505|consen 478 IFI 480 (591)
T ss_pred HHH
Confidence 444
No 119
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=94.88 E-value=0.082 Score=30.73 Aligned_cols=48 Identities=19% Similarity=0.252 Sum_probs=37.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 030377 36 WTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLER 94 (178)
Q Consensus 36 ~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~ 94 (178)
...+..|+..|+.++++.+++.+ .++ ..++..|+...+.+++++|+..
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~----------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN-KPD----------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh-ccH----------HHHHHHHHHHhhHHHHHHHHHh
Confidence 45678899999999999888765 222 2478888888888999998885
No 120
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=93.32 E-value=1 Score=32.01 Aligned_cols=25 Identities=40% Similarity=0.537 Sum_probs=12.4
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCC
Q 030377 107 GWTPLHTAAKERKKEAVRFLIENGA 131 (178)
Q Consensus 107 g~t~l~~a~~~~~~~i~~~Ll~~g~ 131 (178)
|.|-|.-|...++.+++.+|+.+|+
T Consensus 254 GdtMLDNA~Ky~~~emi~~Llk~GA 278 (284)
T PF06128_consen 254 GDTMLDNAMKYKNSEMIAFLLKYGA 278 (284)
T ss_pred cchHHHhHHhcCcHHHHHHHHHcCc
Confidence 4444455555555555555555444
No 121
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=93.28 E-value=0.24 Score=28.74 Aligned_cols=47 Identities=30% Similarity=0.459 Sum_probs=39.2
Q ss_pred cHHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHHc
Q 030377 74 TPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIEN 129 (178)
Q Consensus 74 t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll~~ 129 (178)
..+..|+..|+.++++.+...+ .+ ....+..|+...+.+++++|+++
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~--------~~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KP--------DNDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-cc--------HHHHHHHHHHHhhHHHHHHHHHh
Confidence 5679999999999999998754 22 22579999999999999999987
No 122
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=92.95 E-value=0.31 Score=34.55 Aligned_cols=52 Identities=27% Similarity=0.296 Sum_probs=42.0
Q ss_pred CCHHHHHHHHHcC-CCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC
Q 030377 46 GDIKLVKQLLDEG-MDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADI 98 (178)
Q Consensus 46 ~~~~~v~~ll~~~-~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~ 98 (178)
.+..++++.+.+| .++|..... -..|.|.|.-|+.+++.+++.+|+.+|+-.
T Consensus 228 a~~kvL~~Fi~~Glv~vN~~F~~-~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 228 ASYKVLEYFINRGLVDVNKKFQK-VNSGDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred CcHHHHHHHHhccccccchhhhc-cCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 4567888888888 667755433 357999999999999999999999999843
No 123
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=90.25 E-value=1.1 Score=30.70 Aligned_cols=113 Identities=12% Similarity=0.064 Sum_probs=65.0
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHH----HHHHHcCCCCccccCCCCCC
Q 030377 33 DRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVM----DVLLERGADIDARTKGACGW 108 (178)
Q Consensus 33 ~~g~t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~----~~L~~~~~~~~~~~~~~~g~ 108 (178)
...++.+..||+..+.++|+|+-+. ... ..-.+-+.+|...++.++. .++..+....+..+...--.
T Consensus 74 ~~~q~LFElAC~~qkydiV~WI~qn---L~i------~~~~~iFdIA~~~kDlsLyslGY~l~~~~~~~~~~~d~~~ll~ 144 (192)
T PF03158_consen 74 YLNQELFELACEEQKYDIVKWIGQN---LHI------YNPEDIFDIAFAKKDLSLYSLGYKLLFNRMMSEHNEDPTSLLT 144 (192)
T ss_pred hHHHHHHHHHHHHccccHHHHHhhc---cCC------CCchhhhhhhhhccchhHHHHHHHHHHhhcccccccCHHHHHH
Confidence 4566778888888888888887332 221 2233566777777776542 22333322111111100011
Q ss_pred cHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccccccHHHHHHHHH
Q 030377 109 TPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQR 164 (178)
Q Consensus 109 t~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~e~~~~l~ 164 (178)
.-|.+|+..|...-+.-.+..|.++ + .+.+..|+.+.. ..++.++.
T Consensus 145 ~hl~~a~~kgll~F~letlkygg~~--~------~~vls~Av~ynh--RkIL~yfi 190 (192)
T PF03158_consen 145 QHLEKAAAKGLLPFVLETLKYGGNV--D------IIVLSQAVKYNH--RKILDYFI 190 (192)
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCcc--c------HHHHHHHHHhhH--HHHHHHhh
Confidence 3456688888888887788888866 1 167777775543 36665543
No 124
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=83.79 E-value=3.4 Score=28.46 Aligned_cols=45 Identities=27% Similarity=0.344 Sum_probs=22.3
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCccccCCCCCCcHHHHHHHhCCHHHHHHHH
Q 030377 75 PLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLI 127 (178)
Q Consensus 75 ~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~i~~~Ll 127 (178)
-|..|+..|...-+--.+.+|.+++.. .|..|+..++-.++.+++
T Consensus 146 hl~~a~~kgll~F~letlkygg~~~~~--------vls~Av~ynhRkIL~yfi 190 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKYGGNVDII--------VLSQAVKYNHRKILDYFI 190 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHcCCcccHH--------HHHHHHHhhHHHHHHHhh
Confidence 344555555555554445555555421 445555555555555443
No 125
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=35.68 E-value=43 Score=23.63 Aligned_cols=43 Identities=23% Similarity=0.257 Sum_probs=23.7
Q ss_pred CcHHHHHHhcCCHHHH-HHHHHcCCC----CccccCCCCCCcHHHHHHHh
Q 030377 73 VTPLHLAAQGGHLEVM-DVLLERGAD----IDARTKGACGWTPLHTAAKE 117 (178)
Q Consensus 73 ~t~l~~a~~~~~~~~~-~~L~~~~~~----~~~~~~~~~g~t~l~~a~~~ 117 (178)
..|||-++..+..+++ -+++...+. .|-.+.+ |..+|..|...
T Consensus 223 e~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~n--G~~ALdiAL~~ 270 (280)
T KOG4591|consen 223 ENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHN--GALALDIALCR 270 (280)
T ss_pred cchhHHhhhccccceeeehhhhccccccccccccCCC--chHHHHHHHHH
Confidence 3577777777766644 344444332 2323333 77777777544
No 126
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=26.50 E-value=67 Score=23.18 Aligned_cols=39 Identities=23% Similarity=0.221 Sum_probs=27.9
Q ss_pred HHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCC
Q 030377 55 LDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGAD 97 (178)
Q Consensus 55 l~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~ 97 (178)
++.|+.-|.. +....|+=.+|.+.++....+.|+..|+.
T Consensus 2 le~ga~wn~i----d~~n~t~gd~a~ern~~rly~~lv~~gv~ 40 (271)
T KOG1709|consen 2 LEYGAGWNFI----DYENKTVGDLALERNQSRLYRRLVEAGVP 40 (271)
T ss_pred cccCCCcccc----ChhhCCchHHHHHccHHHHHHHHHHcCCc
Confidence 4556655655 66677787888888888888888887653
No 127
>PF12854 PPR_1: PPR repeat
Probab=25.89 E-value=85 Score=14.60 Aligned_cols=20 Identities=15% Similarity=0.122 Sum_probs=11.2
Q ss_pred cHHHHHHHhCCHHHHHHHHH
Q 030377 109 TPLHTAAKERKKEAVRFLIE 128 (178)
Q Consensus 109 t~l~~a~~~~~~~i~~~Ll~ 128 (178)
+.++.-|+.|..+-+.-|++
T Consensus 12 ~lI~~~Ck~G~~~~A~~l~~ 31 (34)
T PF12854_consen 12 TLIDGYCKAGRVDEAFELFD 31 (34)
T ss_pred HHHHHHHHCCCHHHHHHHHH
Confidence 45555566666665555443
No 128
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.49 E-value=3.7e+02 Score=24.08 Aligned_cols=54 Identities=13% Similarity=0.164 Sum_probs=31.5
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC
Q 030377 37 TPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADI 98 (178)
Q Consensus 37 t~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~ 98 (178)
+-+..|...|+.++.-.......+.+.. +..-..|...|+..++++..+...+.
T Consensus 648 tRF~LaLe~gnle~ale~akkldd~d~w--------~rLge~Al~qgn~~IaEm~yQ~~knf 701 (1202)
T KOG0292|consen 648 TRFELALECGNLEVALEAAKKLDDKDVW--------ERLGEEALRQGNHQIAEMCYQRTKNF 701 (1202)
T ss_pred hheeeehhcCCHHHHHHHHHhcCcHHHH--------HHHHHHHHHhcchHHHHHHHHHhhhh
Confidence 4445566666666655555544443332 13345667788888888887764433
No 129
>PF01671 ASFV_360: African swine fever virus multigene family 360 protein; InterPro: IPR002595 The multigene family 360 protein are found within the African swine fever virus (ASFV) genome which consist of dsDNA and has similar structural features to the poxviruses []. The biological function of this family is not known [], although Q65137 from SWISSPROT is a major structural protein [].; GO: 0042330 taxis
Probab=20.10 E-value=1.1e+02 Score=21.72 Aligned_cols=52 Identities=13% Similarity=0.207 Sum_probs=27.3
Q ss_pred HHHHHHcCCHHHHHHHHHcC-CCccccccCCCCCCCcHHHHHHhc-CCHHHHHHHHHcCCCCc
Q 030377 39 LHIGARKGDIKLVKQLLDEG-MDVNVAAWGPKSKGVTPLHLAAQG-GHLEVMDVLLERGADID 99 (178)
Q Consensus 39 l~~A~~~~~~~~v~~ll~~~-~~~~~~~~~~~~~~~t~l~~a~~~-~~~~~~~~L~~~~~~~~ 99 (178)
|.+|...+++.-+-.+..+. ..++.. -.+.+||.+ ++...+=+-...|+++|
T Consensus 116 L~CaL~fNnvfdlHe~y~~eki~mdin---------eMM~lAC~~d~N~ltIYYCf~LGAdIN 169 (215)
T PF01671_consen 116 LICALYFNNVFDLHEIYNKEKIRMDIN---------EMMRLACMYDNNFLTIYYCFALGADIN 169 (215)
T ss_pred HHHHHHhCCHHHHHHHHHHhhcCCCHH---------HHHHHHHcCCCCchHHHHHHHhcccHH
Confidence 66777777776665555332 222221 245666654 33444444445566665
Done!