Query 030386
Match_columns 178
No_of_seqs 157 out of 1108
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 21:03:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030386.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030386hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1iv0_A Hypothetical protein; r 100.0 5.2E-34 1.8E-38 212.7 10.1 95 63-161 1-98 (98)
2 1nu0_A Hypothetical protein YQ 100.0 5.6E-33 1.9E-37 218.2 10.7 104 62-168 2-108 (138)
3 1vhx_A Putative holliday junct 99.9 3.4E-27 1.2E-31 186.8 11.4 103 63-168 3-110 (150)
4 4ep4_A Crossover junction endo 98.2 1.5E-05 5E-10 64.1 11.1 89 63-154 1-105 (166)
5 1hjr_A Holliday junction resol 97.4 0.0022 7.6E-08 50.7 11.5 90 63-154 1-101 (158)
6 3bzc_A TEX; helix-turn-helix, 96.2 0.032 1.1E-06 54.1 11.1 90 60-159 326-424 (785)
7 3psf_A Transcription elongatio 95.4 0.089 3.1E-06 52.4 10.9 96 63-169 519-639 (1030)
8 3psi_A Transcription elongatio 95.2 0.097 3.3E-06 53.0 10.5 85 63-158 516-621 (1219)
9 3vov_A Glucokinase, hexokinase 93.8 0.17 5.9E-06 42.1 7.4 91 64-157 2-108 (302)
10 2ch5_A NAGK protein; transfera 93.3 0.33 1.1E-05 40.4 8.3 92 60-157 3-111 (347)
11 3vgl_A Glucokinase; ROK family 91.2 0.18 6.1E-06 42.2 4.1 92 63-157 2-106 (321)
12 3epq_A Putative fructokinase; 90.7 0.85 2.9E-05 38.2 7.8 89 63-156 3-106 (302)
13 2ap1_A Putative regulator prot 88.9 0.97 3.3E-05 37.5 6.7 89 63-157 24-130 (327)
14 1saz_A Probable butyrate kinas 88.5 4.2 0.00014 35.1 10.7 90 64-158 3-131 (381)
15 2gup_A ROK family protein; sug 88.5 0.76 2.6E-05 37.4 5.7 87 64-157 5-104 (292)
16 3r6m_A YEAZ, resuscitation pro 87.5 5.4 0.00019 32.4 10.3 84 63-154 2-93 (213)
17 2qm1_A Glucokinase; alpha-beta 87.2 0.6 2E-05 38.4 4.4 92 63-157 6-118 (326)
18 2e2o_A Hexokinase; acetate and 87.2 2 6.9E-05 34.9 7.5 83 64-156 3-95 (299)
19 1z6r_A MLC protein; transcript 86.0 0.96 3.3E-05 38.8 5.2 90 62-156 84-195 (406)
20 2hoe_A N-acetylglucosamine kin 85.7 1.4 4.7E-05 37.7 6.0 91 63-156 87-197 (380)
21 3mcp_A Glucokinase; structural 84.2 2.9 0.0001 36.4 7.5 91 62-156 8-117 (366)
22 3htv_A D-allose kinase, alloki 83.4 2.7 9.1E-05 35.1 6.7 90 63-157 7-117 (310)
23 3lm2_A Putative kinase; struct 83.4 1.6 5.3E-05 35.7 5.1 55 63-120 6-64 (226)
24 2ivn_A O-sialoglycoprotein end 82.8 9.1 0.00031 32.3 9.8 94 64-168 2-116 (330)
25 4htl_A Beta-glucoside kinase; 82.6 3.2 0.00011 34.2 6.8 91 63-156 4-106 (297)
26 1woq_A Inorganic polyphosphate 81.2 2.5 8.7E-05 34.1 5.6 93 62-157 11-124 (267)
27 3djc_A Type III pantothenate k 79.7 22 0.00075 29.6 11.0 57 64-120 3-67 (266)
28 1sz2_A Glucokinase, glucose ki 79.2 6.1 0.00021 32.9 7.4 87 62-156 13-111 (332)
29 2aa4_A Mannac kinase, putative 77.7 5 0.00017 32.3 6.3 91 64-157 2-106 (289)
30 3r8e_A Hypothetical sugar kina 76.4 4.6 0.00016 33.5 5.9 90 61-156 17-127 (321)
31 2gel_A Putative GRAM negative 76.3 13 0.00045 30.0 8.4 91 64-169 2-101 (231)
32 4db3_A Glcnac kinase, N-acetyl 76.0 7.8 0.00027 32.3 7.2 87 64-156 25-129 (327)
33 3i33_A Heat shock-related 70 k 73.0 1.7 5.9E-05 36.7 2.4 20 62-81 22-41 (404)
34 4gni_A Putative heat shock pro 72.7 2.3 7.7E-05 36.2 3.1 20 62-81 12-31 (409)
35 1z05_A Transcriptional regulat 72.5 4.9 0.00017 34.8 5.2 90 62-156 107-217 (429)
36 2yhw_A Bifunctional UDP-N-acet 71.4 4.3 0.00015 33.8 4.5 89 63-156 30-140 (343)
37 3cet_A Conserved archaeal prot 69.5 16 0.00055 32.0 7.8 86 65-156 2-92 (334)
38 2yhx_A Hexokinase B; transfera 68.5 2.2 7.6E-05 38.4 2.2 21 61-81 59-79 (457)
39 1zbs_A Hypothetical protein PG 66.0 40 0.0014 27.3 9.2 83 65-155 2-96 (291)
40 3eno_A Putative O-sialoglycopr 65.9 26 0.00088 29.8 8.3 88 61-155 4-111 (334)
41 3qfu_A 78 kDa glucose-regulate 65.0 3.8 0.00013 34.2 2.8 19 63-81 18-36 (394)
42 1yuw_A Heat shock cognate 71 k 64.9 3.8 0.00013 37.2 3.0 19 63-81 4-22 (554)
43 3kki_A CAI-1 autoinducer synth 63.5 17 0.00058 30.1 6.5 55 97-160 173-227 (409)
44 1dkg_D Molecular chaperone DNA 62.5 3.1 0.00011 34.9 1.9 18 64-81 3-20 (383)
45 1zc6_A Probable N-acetylglucos 62.4 17 0.00059 29.6 6.4 83 63-156 11-110 (305)
46 2h3g_X Biosynthetic protein; p 62.1 66 0.0023 26.6 11.1 79 65-155 2-89 (268)
47 2q2r_A Glucokinase 1, putative 61.0 15 0.0005 31.1 5.8 59 62-121 28-100 (373)
48 2a6a_A Hypothetical protein TM 60.2 66 0.0022 25.9 10.0 83 63-154 12-103 (218)
49 3eyt_A Uncharacterized protein 60.0 41 0.0014 23.5 7.4 41 99-139 48-89 (158)
50 2ych_A Competence protein PILM 59.5 35 0.0012 28.3 7.8 58 63-120 13-85 (377)
51 3h1q_A Ethanolamine utilizatio 58.5 64 0.0022 25.2 10.5 63 62-124 27-105 (272)
52 3en9_A Glycoprotease, O-sialog 56.1 49 0.0017 29.5 8.6 86 62-155 5-110 (540)
53 3bex_A Type III pantothenate k 55.6 33 0.0011 28.0 6.9 57 63-119 3-65 (249)
54 3g0t_A Putative aminotransfera 54.6 36 0.0012 28.1 7.1 56 98-159 170-225 (437)
55 3f9t_A TDC, L-tyrosine decarbo 52.8 40 0.0014 26.9 6.8 53 98-159 159-211 (397)
56 4b9q_A Chaperone protein DNAK; 52.7 8.5 0.00029 35.3 3.1 19 63-81 2-20 (605)
57 4e1j_A Glycerol kinase; struct 52.7 25 0.00087 31.4 6.2 21 61-81 24-44 (520)
58 3euc_A Histidinol-phosphate am 52.3 22 0.00075 28.7 5.3 56 98-159 145-202 (367)
59 3rjt_A Lipolytic protein G-D-S 51.4 41 0.0014 24.4 6.2 56 98-155 118-173 (216)
60 3a2b_A Serine palmitoyltransfe 49.6 33 0.0011 28.0 6.0 55 98-161 158-215 (398)
61 2r6a_A DNAB helicase, replicat 49.3 28 0.00094 30.4 5.8 59 98-156 301-362 (454)
62 1q77_A Hypothetical protein AQ 49.2 14 0.00048 25.7 3.2 42 97-154 96-137 (138)
63 3lor_A Thiol-disulfide isomera 48.5 66 0.0023 22.4 7.6 41 99-139 50-91 (160)
64 2ekc_A AQ_1548, tryptophan syn 48.2 38 0.0013 27.6 6.1 55 98-154 32-100 (262)
65 1qop_A Tryptophan synthase alp 47.9 31 0.0011 28.2 5.5 54 98-153 32-99 (268)
66 3cq5_A Histidinol-phosphate am 47.8 32 0.0011 27.9 5.6 54 98-160 152-205 (369)
67 2gm3_A Unknown protein; AT3G01 47.2 39 0.0013 24.5 5.5 55 97-158 111-165 (175)
68 2q6t_A DNAB replication FORK h 47.2 37 0.0012 29.5 6.2 60 97-156 297-361 (444)
69 1zxo_A Conserved hypothetical 46.8 21 0.00073 28.9 4.4 83 65-155 2-94 (291)
70 2v7y_A Chaperone protein DNAK; 46.5 12 0.00041 33.3 3.0 18 64-81 3-20 (509)
71 2kho_A Heat shock protein 70; 45.8 10 0.00034 34.8 2.4 18 64-81 3-20 (605)
72 3o8m_A Hexokinase; rnaseh-like 45.3 12 0.00041 34.2 2.8 91 61-151 78-202 (485)
73 1q57_A DNA primase/helicase; d 45.1 51 0.0017 28.9 6.8 59 97-155 341-401 (503)
74 1jmv_A USPA, universal stress 44.6 74 0.0025 21.8 7.5 50 97-156 89-138 (141)
75 1es9_A PAF-AH, platelet-activa 44.1 95 0.0032 23.4 7.5 55 99-155 117-173 (232)
76 1tq8_A Hypothetical protein RV 43.7 54 0.0018 23.9 5.9 54 97-157 106-159 (163)
77 1kcf_A Hypothetical 30.2 KD pr 43.6 14 0.00047 31.1 2.8 19 63-81 40-58 (258)
78 1n0w_A DNA repair protein RAD5 43.4 30 0.001 26.2 4.5 60 99-158 108-174 (243)
79 3g25_A Glycerol kinase; IDP007 42.8 42 0.0014 29.6 6.0 19 63-81 6-24 (501)
80 3i16_A Aluminum resistance pro 42.5 42 0.0015 29.3 5.9 57 97-160 162-223 (427)
81 3nra_A Aspartate aminotransfer 42.3 81 0.0028 25.5 7.2 56 98-160 168-223 (407)
82 3dzz_A Putative pyridoxal 5'-p 42.0 35 0.0012 27.5 4.9 57 97-159 147-203 (391)
83 3ifr_A Carbohydrate kinase, FG 41.9 40 0.0014 30.0 5.7 19 63-81 7-25 (508)
84 3fdx_A Putative filament prote 41.8 22 0.00075 24.7 3.3 23 97-119 93-115 (143)
85 3p94_A GDSL-like lipase; serin 41.4 63 0.0021 23.4 5.9 56 98-155 102-160 (204)
86 4ehu_A Activator of 2-hydroxyi 41.4 17 0.00057 29.1 2.9 19 63-81 1-19 (276)
87 3bgw_A DNAB-like replicative h 41.3 62 0.0021 28.5 6.8 60 97-156 295-358 (444)
88 3kax_A Aminotransferase, class 41.3 69 0.0024 25.6 6.6 56 98-160 145-200 (383)
89 1b5f_B Protein (cardosin A); h 41.2 22 0.00074 23.9 3.0 18 63-80 69-86 (87)
90 2z08_A Universal stress protei 41.0 23 0.00078 24.6 3.3 24 97-120 86-109 (137)
91 3piu_A 1-aminocyclopropane-1-c 40.5 61 0.0021 26.9 6.4 57 98-160 174-235 (435)
92 2uyt_A Rhamnulokinase; rhamnos 40.4 83 0.0028 27.4 7.4 20 62-81 3-22 (489)
93 3l8a_A METC, putative aminotra 40.0 56 0.0019 27.1 6.0 56 98-159 182-237 (421)
94 2w8t_A SPT, serine palmitoyltr 39.8 33 0.0011 28.7 4.6 54 98-160 179-235 (427)
95 3hvy_A Cystathionine beta-lyas 39.6 52 0.0018 28.7 6.0 57 97-160 162-223 (427)
96 2vtf_A Endo-beta-N-acetylgluco 39.5 85 0.0029 29.5 7.7 57 97-156 156-212 (626)
97 1mjh_A Protein (ATP-binding do 39.5 24 0.00083 25.1 3.3 54 97-157 107-160 (162)
98 1d2f_A MALY protein; aminotran 38.7 39 0.0013 27.5 4.8 57 98-160 150-206 (390)
99 3tnj_A Universal stress protei 38.5 26 0.00089 24.5 3.3 51 97-155 96-146 (150)
100 3nkl_A UDP-D-quinovosamine 4-d 37.6 41 0.0014 23.7 4.2 45 100-155 55-99 (141)
101 4a2a_A Cell division protein F 37.5 62 0.0021 28.2 6.1 60 62-121 7-86 (419)
102 3hgm_A Universal stress protei 37.2 26 0.0009 24.3 3.1 24 97-120 97-120 (147)
103 2dum_A Hypothetical protein PH 37.1 27 0.00094 25.1 3.3 55 97-158 104-158 (170)
104 3guv_A Site-specific recombina 36.7 78 0.0027 23.4 5.9 59 97-163 60-120 (167)
105 2dr3_A UPF0273 protein PH0284; 36.6 56 0.0019 24.6 5.1 60 97-159 115-174 (247)
106 2zyj_A Alpha-aminodipate amino 36.3 69 0.0024 26.1 5.9 57 98-160 150-207 (397)
107 1ivn_A Thioesterase I; hydrola 36.0 1.1E+02 0.0038 22.1 6.5 19 100-118 89-107 (190)
108 3ll3_A Gluconate kinase; xylul 36.0 51 0.0017 29.3 5.4 19 63-81 4-22 (504)
109 1c7n_A Cystalysin; transferase 35.7 44 0.0015 27.2 4.6 57 98-160 152-208 (399)
110 3d2f_A Heat shock protein homo 35.6 19 0.00063 33.7 2.5 18 64-81 3-20 (675)
111 3bh0_A DNAB-like replicative h 35.4 71 0.0024 26.3 5.9 60 97-156 166-229 (315)
112 2yrr_A Aminotransferase, class 35.3 63 0.0021 25.3 5.3 53 98-159 112-164 (353)
113 2hl0_A Threonyl-tRNA synthetas 34.8 77 0.0026 24.7 5.6 55 97-153 59-114 (143)
114 3dlo_A Universal stress protei 34.7 31 0.0011 25.0 3.3 24 97-120 104-127 (155)
115 3daq_A DHDPS, dihydrodipicolin 34.3 1.5E+02 0.0051 24.4 7.8 53 97-156 84-136 (292)
116 1iay_A ACC synthase 2, 1-amino 34.0 67 0.0023 26.6 5.5 57 98-160 171-232 (428)
117 3mil_A Isoamyl acetate-hydroly 33.7 37 0.0013 25.3 3.6 56 98-155 101-168 (240)
118 2dpn_A Glycerol kinase; thermu 33.6 87 0.003 27.5 6.5 56 64-119 3-80 (495)
119 3h6e_A Carbohydrate kinase, FG 33.4 88 0.003 27.8 6.5 56 63-118 6-76 (482)
120 3t18_A Aminotransferase class 33.4 87 0.003 25.7 6.1 60 98-159 162-228 (413)
121 3s3t_A Nucleotide-binding prot 32.9 31 0.001 24.0 2.8 24 97-120 94-118 (146)
122 1jce_A ROD shape-determining p 32.9 25 0.00085 28.9 2.7 19 63-81 3-21 (344)
123 2bwn_A 5-aminolevulinate synth 32.8 95 0.0033 25.2 6.2 53 98-159 163-218 (401)
124 3hp4_A GDSL-esterase; psychrot 32.6 1.3E+02 0.0046 21.3 6.8 23 98-120 91-113 (185)
125 3i8b_A Xylulose kinase; strain 32.5 1.1E+02 0.0036 27.4 6.9 56 63-118 5-72 (515)
126 3tqx_A 2-amino-3-ketobutyrate 32.4 30 0.001 28.0 3.0 52 99-159 159-215 (399)
127 3ecd_A Serine hydroxymethyltra 32.4 95 0.0032 25.2 6.1 51 98-159 160-210 (425)
128 3flu_A DHDPS, dihydrodipicolin 32.1 1.7E+02 0.0059 24.1 7.8 53 97-156 89-141 (297)
129 2e7j_A SEP-tRNA:Cys-tRNA synth 32.0 79 0.0027 25.1 5.5 54 98-160 131-188 (371)
130 3qze_A DHDPS, dihydrodipicolin 31.9 1.4E+02 0.0047 25.1 7.2 53 97-156 105-157 (314)
131 3h7f_A Serine hydroxymethyltra 31.9 1E+02 0.0036 26.0 6.5 52 97-159 172-223 (447)
132 2d4w_A Glycerol kinase; alpha 31.8 72 0.0025 28.2 5.7 18 64-81 3-20 (504)
133 1gc0_A Methionine gamma-lyase; 31.8 38 0.0013 28.2 3.7 54 98-161 139-192 (398)
134 3mdq_A Exopolyphosphatase; str 31.3 2.3E+02 0.0078 23.6 8.9 85 62-155 3-110 (315)
135 1uqt_A Alpha, alpha-trehalose- 31.2 1.3E+02 0.0044 26.6 7.2 68 98-165 273-347 (482)
136 3fdb_A Beta C-S lyase, putativ 31.0 1.1E+02 0.0038 24.3 6.3 56 98-160 139-194 (377)
137 3m5v_A DHDPS, dihydrodipicolin 30.9 1.8E+02 0.0061 24.1 7.7 53 97-156 90-142 (301)
138 3e96_A Dihydrodipicolinate syn 30.9 1.7E+02 0.0058 24.4 7.6 52 97-155 93-144 (316)
139 1vjg_A Putative lipase from th 30.7 1E+02 0.0035 22.8 5.7 54 99-155 119-172 (218)
140 3rq1_A Aminotransferase class 30.7 97 0.0033 25.4 6.0 60 98-159 163-229 (418)
141 3gv0_A Transcriptional regulat 30.5 1.5E+02 0.0052 22.8 6.8 46 99-159 55-100 (288)
142 3g13_A Putative conjugative tr 30.5 62 0.0021 24.0 4.4 59 97-163 62-120 (169)
143 2p3r_A Glycerol kinase; glycer 30.5 94 0.0032 27.6 6.2 19 63-81 3-21 (510)
144 3tak_A DHDPS, dihydrodipicolin 30.2 1.8E+02 0.0061 23.9 7.6 53 97-156 83-135 (291)
145 2itm_A Xylulose kinase, xylulo 30.1 1.1E+02 0.0039 26.6 6.6 17 65-81 2-18 (484)
146 3o3m_B Beta subunit 2-hydroxya 30.0 1.4E+02 0.0047 25.6 7.0 58 97-162 300-357 (385)
147 3eb2_A Putative dihydrodipicol 29.7 1.6E+02 0.0054 24.4 7.2 53 97-156 86-138 (300)
148 2bkw_A Alanine-glyoxylate amin 29.6 86 0.0029 25.0 5.3 55 98-159 125-179 (385)
149 3na8_A Putative dihydrodipicol 29.5 1.3E+02 0.0045 25.2 6.7 53 97-156 106-158 (315)
150 1rd5_A Tryptophan synthase alp 29.1 68 0.0023 25.6 4.6 54 99-155 34-101 (262)
151 2hsj_A Putative platelet activ 29.0 1.7E+02 0.0057 21.3 7.1 57 98-155 110-174 (214)
152 2ch1_A 3-hydroxykynurenine tra 28.9 37 0.0013 27.5 3.0 53 98-159 131-183 (396)
153 2vc6_A MOSA, dihydrodipicolina 28.8 1.7E+02 0.0057 24.1 7.1 53 97-156 82-134 (292)
154 3kws_A Putative sugar isomeras 28.8 1.6E+02 0.0055 22.9 6.8 57 98-154 105-165 (287)
155 2ehh_A DHDPS, dihydrodipicolin 28.7 1.7E+02 0.0058 24.0 7.2 53 97-156 82-134 (294)
156 2zf5_O Glycerol kinase; hypert 28.6 1.1E+02 0.0037 26.9 6.2 19 63-81 3-21 (497)
157 3fg9_A Protein of universal st 28.5 35 0.0012 24.2 2.5 24 97-120 105-129 (156)
158 3kgw_A Alanine-glyoxylate amin 28.4 39 0.0013 27.1 3.0 53 98-159 136-188 (393)
159 1xky_A Dihydrodipicolinate syn 28.2 1.5E+02 0.0052 24.6 6.8 53 97-156 94-146 (301)
160 3si9_A DHDPS, dihydrodipicolin 28.2 2.3E+02 0.008 23.7 8.0 53 97-156 104-156 (315)
161 3cpr_A Dihydrodipicolinate syn 28.0 1.8E+02 0.006 24.2 7.2 53 97-156 98-150 (304)
162 1czn_A Flavodoxin; FMN binding 27.4 57 0.0019 23.8 3.6 47 98-144 101-167 (169)
163 3l21_A DHDPS, dihydrodipicolin 27.4 1.4E+02 0.0049 24.8 6.5 53 97-156 97-149 (304)
164 1sff_A 4-aminobutyrate aminotr 27.2 1.2E+02 0.0042 24.7 6.0 56 98-159 183-243 (426)
165 1f6k_A N-acetylneuraminate lya 27.2 1.9E+02 0.0066 23.7 7.2 53 97-156 86-138 (293)
166 2dkj_A Serine hydroxymethyltra 27.1 1.4E+02 0.0048 24.0 6.3 52 98-160 151-202 (407)
167 1vjo_A Alanine--glyoxylate ami 27.0 51 0.0017 26.7 3.5 53 98-159 147-199 (393)
168 3k4h_A Putative transcriptiona 27.0 1.7E+02 0.0059 22.3 6.5 47 99-160 58-104 (292)
169 2yxg_A DHDPS, dihydrodipicolin 26.9 2.4E+02 0.0084 23.0 7.8 53 97-156 82-134 (289)
170 2q8u_A Exonuclease, putative; 26.8 2.5E+02 0.0087 22.7 8.3 53 97-154 48-102 (336)
171 2z61_A Probable aspartate amin 26.8 63 0.0022 26.0 4.1 52 98-160 143-194 (370)
172 1fxw_F Alpha2, platelet-activa 26.8 2E+02 0.0069 21.6 7.6 55 99-155 118-174 (229)
173 3ly1_A Putative histidinol-pho 26.6 58 0.002 25.9 3.8 55 98-159 128-183 (354)
174 3vk5_A MOEO5; TIM barrel, tran 26.4 77 0.0026 27.2 4.7 48 100-155 56-104 (286)
175 2wkj_A N-acetylneuraminate lya 26.3 2E+02 0.0068 23.8 7.2 54 97-156 93-146 (303)
176 3n0l_A Serine hydroxymethyltra 26.3 1.5E+02 0.0051 24.0 6.3 52 97-159 151-202 (417)
177 1svv_A Threonine aldolase; str 26.2 1.3E+02 0.0046 23.4 5.9 54 98-158 127-186 (359)
178 1u94_A RECA protein, recombina 26.1 86 0.0029 26.8 5.0 62 98-159 129-201 (356)
179 3l0q_A Xylulose kinase; xlylul 26.0 1.1E+02 0.0037 27.4 5.8 19 63-81 5-23 (554)
180 2dr1_A PH1308 protein, 386AA l 25.8 91 0.0031 24.8 4.8 54 98-160 133-187 (386)
181 1hux_A Activator of (R)-2-hydr 25.8 49 0.0017 26.8 3.2 19 63-81 3-21 (270)
182 5nul_A Flavodoxin; electron tr 25.6 41 0.0014 23.7 2.4 42 98-141 95-136 (138)
183 2fz5_A Flavodoxin; alpha/beta 25.4 61 0.0021 22.4 3.3 41 110-154 46-86 (137)
184 2rfg_A Dihydrodipicolinate syn 25.2 1.8E+02 0.0063 24.0 6.8 53 97-156 82-134 (297)
185 1fc4_A 2-amino-3-ketobutyrate 25.0 66 0.0023 26.1 3.9 53 98-159 160-217 (401)
186 3d0c_A Dihydrodipicolinate syn 25.0 2E+02 0.0069 24.0 7.0 51 98-155 94-144 (314)
187 4hf7_A Putative acylhydrolase; 24.7 2.2E+02 0.0074 21.2 6.7 55 99-155 107-165 (209)
188 3ftb_A Histidinol-phosphate am 24.5 1.4E+02 0.0047 23.7 5.6 53 99-159 135-187 (361)
189 3get_A Histidinol-phosphate am 24.1 49 0.0017 26.5 2.9 54 98-159 142-195 (365)
190 2r91_A 2-keto-3-deoxy-(6-phosp 24.1 2.9E+02 0.01 22.5 7.8 54 97-156 77-130 (286)
191 2x5d_A Probable aminotransfera 24.0 1.4E+02 0.0049 24.4 5.8 56 98-160 161-216 (412)
192 2r8w_A AGR_C_1641P; APC7498, d 23.9 2E+02 0.0068 24.3 6.9 53 97-156 116-168 (332)
193 1xp8_A RECA protein, recombina 23.8 2.9E+02 0.0099 23.6 7.9 62 97-158 139-211 (366)
194 3fsl_A Aromatic-amino-acid ami 23.8 1.1E+02 0.0037 24.7 4.9 56 98-159 159-216 (397)
195 1ii7_A MRE11 nuclease; RAD50, 23.6 2.5E+02 0.0084 22.9 7.2 54 98-154 28-81 (333)
196 2v9d_A YAGE; dihydrodipicolini 23.6 2.2E+02 0.0076 24.2 7.1 53 97-156 113-165 (343)
197 3s5o_A 4-hydroxy-2-oxoglutarat 23.6 2.5E+02 0.0086 23.3 7.3 55 97-156 96-150 (307)
198 2zr9_A Protein RECA, recombina 23.5 1.4E+02 0.0046 25.3 5.7 62 98-159 127-199 (349)
199 3dz1_A Dihydrodipicolinate syn 23.5 2.2E+02 0.0076 23.6 7.0 54 97-156 89-142 (313)
200 1ivn_A Thioesterase I; hydrola 23.4 1.3E+02 0.0046 21.6 5.0 55 97-155 49-106 (190)
201 3h75_A Periplasmic sugar-bindi 23.2 1.7E+02 0.0057 23.4 6.0 50 98-161 49-99 (350)
202 3mt0_A Uncharacterized protein 23.2 1.7E+02 0.0059 22.8 6.0 25 97-121 76-100 (290)
203 4dq6_A Putative pyridoxal phos 23.0 84 0.0029 25.2 4.1 55 98-160 154-208 (391)
204 2nuw_A 2-keto-3-deoxygluconate 23.0 2.1E+02 0.0073 23.4 6.7 54 97-156 78-131 (288)
205 1pff_A Methionine gamma-lyase; 22.8 50 0.0017 26.1 2.7 54 99-161 73-126 (331)
206 1w3i_A EDA, 2-keto-3-deoxy glu 22.5 2E+02 0.0068 23.7 6.5 54 97-156 78-131 (293)
207 1m32_A 2-aminoethylphosphonate 22.3 1.6E+02 0.0053 23.1 5.5 53 98-159 118-171 (366)
208 3oby_A Protein pelota homolog; 22.3 3.2E+02 0.011 23.5 8.0 93 64-173 132-234 (352)
209 3isl_A Purine catabolism prote 22.3 86 0.0029 25.4 4.1 53 98-159 124-176 (416)
210 1j32_A Aspartate aminotransfer 22.2 1.2E+02 0.0041 24.4 4.9 56 98-160 152-207 (388)
211 2w40_A Glycerol kinase, putati 22.0 1.1E+02 0.0036 27.0 4.9 18 64-81 5-22 (503)
212 1elu_A L-cysteine/L-cystine C- 22.0 32 0.0011 27.6 1.4 56 98-159 143-198 (390)
213 3grc_A Sensor protein, kinase; 21.9 1.8E+02 0.0063 19.3 5.2 51 100-158 40-90 (140)
214 3nhm_A Response regulator; pro 21.8 1.8E+02 0.0061 19.1 5.8 51 100-158 37-87 (133)
215 3op7_A Aminotransferase class 21.6 1.4E+02 0.0046 24.0 5.1 56 98-160 143-198 (375)
216 3huu_A Transcription regulator 21.5 1.9E+02 0.0067 22.4 6.0 45 99-158 72-116 (305)
217 1t6c_A Exopolyphosphatase; alp 21.4 2.8E+02 0.0095 23.1 7.2 85 63-156 12-119 (315)
218 4f4e_A Aromatic-amino-acid ami 21.3 1.8E+02 0.0061 24.0 5.9 56 98-159 181-238 (420)
219 1nfp_A LUXF gene product; flav 21.3 1.4E+02 0.0049 22.8 5.1 48 96-145 175-223 (228)
220 1o5k_A DHDPS, dihydrodipicolin 21.3 1.9E+02 0.0064 24.1 6.1 53 97-156 94-146 (306)
221 3av0_A DNA double-strand break 21.3 2.4E+02 0.008 23.7 6.8 54 98-154 48-101 (386)
222 3h3n_X Glycerol kinase; ATP-bi 21.1 1.2E+02 0.0041 26.7 5.1 19 63-81 5-23 (506)
223 4a1f_A DNAB helicase, replicat 21.1 38 0.0013 29.0 1.8 58 97-154 142-202 (338)
224 2i1q_A DNA repair and recombin 21.0 80 0.0027 25.7 3.6 60 98-157 191-258 (322)
225 3loq_A Universal stress protei 21.0 1.7E+02 0.0058 22.9 5.5 51 99-158 114-164 (294)
226 3zrp_A Serine-pyruvate aminotr 20.9 58 0.002 25.9 2.7 54 98-160 115-168 (384)
227 2o0r_A RV0858C (N-succinyldiam 20.8 1.2E+02 0.004 24.9 4.6 56 98-160 149-204 (411)
228 1lw7_A Transcriptional regulat 20.8 93 0.0032 26.0 4.1 57 101-157 268-328 (365)
229 3ri6_A O-acetylhomoserine sulf 20.8 81 0.0028 27.2 3.8 55 98-162 156-210 (430)
230 1cs1_A CGS, protein (cystathio 20.8 2.3E+02 0.0079 22.9 6.5 54 98-161 126-179 (386)
231 3cqj_A L-ribulose-5-phosphate 20.7 3E+02 0.01 21.4 7.7 59 98-157 109-169 (295)
232 2qr3_A Two-component system re 20.6 1.8E+02 0.0061 19.3 4.9 50 100-157 37-89 (140)
233 1f07_A Coenzyme F420-dependent 20.5 1.7E+02 0.006 23.6 5.6 39 96-140 280-318 (321)
234 3lda_A DNA repair protein RAD5 20.4 82 0.0028 27.5 3.8 65 98-162 261-332 (400)
235 2fcr_A Flavodoxin; electron tr 20.3 1E+02 0.0036 22.7 3.9 47 98-144 105-171 (173)
236 1zzm_A Putative deoxyribonucle 20.2 3E+02 0.01 21.1 7.0 56 97-155 76-134 (259)
237 1esc_A Esterase; 2.10A {Strept 20.2 2.1E+02 0.007 23.0 6.0 24 131-156 222-245 (306)
238 1ag9_A Flavodoxin; electron tr 20.1 55 0.0019 24.4 2.3 29 116-144 139-167 (175)
239 1yiz_A Kynurenine aminotransfe 20.1 1.5E+02 0.0051 24.4 5.2 56 98-160 171-226 (429)
240 3jzl_A Putative cystathionine 20.1 1.1E+02 0.0039 26.2 4.6 56 97-160 147-206 (409)
241 3b4u_A Dihydrodipicolinate syn 20.1 3.3E+02 0.011 22.3 7.3 57 97-156 85-141 (294)
242 3fkr_A L-2-keto-3-deoxyarabona 20.1 3.4E+02 0.012 22.5 7.4 57 97-157 90-146 (309)
243 1gd9_A Aspartate aminotransfer 20.1 1.2E+02 0.0042 24.3 4.6 56 98-160 149-204 (389)
244 3ele_A Amino transferase; RER0 20.0 1.1E+02 0.0037 24.8 4.2 59 98-160 161-222 (398)
No 1
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=100.00 E-value=5.2e-34 Score=212.71 Aligned_cols=95 Identities=25% Similarity=0.260 Sum_probs=88.1
Q ss_pred ceEEEEecCCceEEEEeecC--CcccccEEEEccC-hhHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHH
Q 030386 63 GFSLGVDLGLSRTGLALSKG--FCVRPLTVLKLRG-EKLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGR 139 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD~--~~A~Pl~tI~~~~-~~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~ 139 (178)
+++||||||+||||||+||+ .+|+|++||.+++ ..++++|.+++++|+++.||||+|++|||+++++++++++|+++
T Consensus 1 mriLglD~G~kriGvAvsd~~~~~A~pl~ti~~~~~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~ 80 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEGVPLASGRGYLVRKTLEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEA 80 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSCCSSCCCEEEEECCCHHHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHH
T ss_pred CcEEEEEeCCCEEEEEEEeCCCCeeeeeEEEEccCcHHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHH
Confidence 36999999999999999995 5899999998654 56889999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCcEEEEcCCCchh
Q 030386 140 LAVRAAERSFSDILITAIFSFS 161 (178)
Q Consensus 140 L~~~~~~~glpV~lvDERlSTs 161 (178)
|+++ ++||++|||||||.
T Consensus 81 L~~~----~lpV~~~DERlTT~ 98 (98)
T 1iv0_A 81 LRAR----GVEVELWDERFTTK 98 (98)
T ss_dssp HHHT----TCEEEEECCSCCCC
T ss_pred HhcC----CCCEEEECCCCCCC
Confidence 9985 48999999999984
No 2
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=100.00 E-value=5.6e-33 Score=218.20 Aligned_cols=104 Identities=25% Similarity=0.331 Sum_probs=92.0
Q ss_pred CceEEEEecCCceEEEEeecC--CcccccEEEEccC-hhHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHH
Q 030386 62 GGFSLGVDLGLSRTGLALSKG--FCVRPLTVLKLRG-EKLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAG 138 (178)
Q Consensus 62 ~~rILgLD~G~KRIGVAiSD~--~~A~Pl~tI~~~~-~~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~ 138 (178)
.+++||||||+||||||+||+ .+|+|++||.+++ ..++++|.+++++|+|+.||||+|++|||+++++++++++|++
T Consensus 2 ~~~iLglD~G~kriGvAvsd~~~~~A~pl~ti~~~~~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~ 81 (138)
T 1nu0_A 2 SGTLMAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFAN 81 (138)
T ss_dssp CCEEEEEECCSSEEEEEEEETTTTEEEEEEEEEEETTEECHHHHHHHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCEEEEEEEcCCCCEEeeEEEEEcCCcchHHHHHHHHHHHcCCCEEEEecccCCCcCcCHHHHHHHHHHH
Confidence 368999999999999999995 5899999998754 5678999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCcEEEEcCCCchhhhHHHHH
Q 030386 139 RLAVRAAERSFSDILITAIFSFSCHFAIFF 168 (178)
Q Consensus 139 ~L~~~~~~~glpV~lvDERlSTs~~~a~~~ 168 (178)
+|++++ ++||++|||||||..-...++
T Consensus 82 ~L~~~~---~lpV~~~DERlTT~~A~~~l~ 108 (138)
T 1nu0_A 82 RIHGRF---GVEVKLHDERLSTVEARSGLF 108 (138)
T ss_dssp HHHHHH---CCCEEEEEEECCCCCC-----
T ss_pred HHHHHh---CCCEEEEcCCcCHHHHHHHHH
Confidence 999998 589999999999987666554
No 3
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=99.94 E-value=3.4e-27 Score=186.84 Aligned_cols=103 Identities=20% Similarity=0.322 Sum_probs=92.9
Q ss_pred ceEEEEecCCceEEEEeecC--CcccccEEEEccC---hhHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHH
Q 030386 63 GFSLGVDLGLSRTGLALSKG--FCVRPLTVLKLRG---EKLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVA 137 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD~--~~A~Pl~tI~~~~---~~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa 137 (178)
+++||||+|+||||+|++|. .+|+|+++|.+.+ ...++.|.+++++|+|+.||||+|++|||++++++++++.|+
T Consensus 3 mriLGiDpG~~riGvAv~d~~g~~a~p~~~I~~~~~r~~~~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~ 82 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEMGWTAQGIETIKINEAEGDYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFA 82 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTTSSSEEEEEEEECBGGGTBCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHH
T ss_pred CEEEEEEccCCEEEEEEEECCCCEEeeEEEEEcCCcchHHHHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHH
Confidence 68999999999999999994 5899999997543 357899999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCcEEEEcCCCchhhhHHHHH
Q 030386 138 GRLAVRAAERSFSDILITAIFSFSCHFAIFF 168 (178)
Q Consensus 138 ~~L~~~~~~~glpV~lvDERlSTs~~~a~~~ 168 (178)
+.|++++ ++||++|||||||..-...+.
T Consensus 83 ~~L~~~~---~lpV~~vDEr~Ts~~Ak~~l~ 110 (150)
T 1vhx_A 83 KVLETTY---NVPVVLWDERLTTMAAEKMLI 110 (150)
T ss_dssp HHHHHHH---CSCEEEECCSSCHHHHHHHHH
T ss_pred HHHHHhh---CCCEEEecCCCCHHHHHHHHH
Confidence 9999887 689999999999877665543
No 4
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=98.20 E-value=1.5e-05 Score=64.07 Aligned_cols=89 Identities=16% Similarity=0.135 Sum_probs=61.0
Q ss_pred ceEEEEecCCceEEEEeec--CC---ccccc--EEEEccC--------hhHHHHHHHHHHHcCCCEEEEeecCC-CCCCC
Q 030386 63 GFSLGVDLGLSRTGLALSK--GF---CVRPL--TVLKLRG--------EKLELQLLEIAQREETDEFIIGLPKS-WDGSE 126 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD--~~---~A~Pl--~tI~~~~--------~~~~~~L~~iI~e~~v~~IVVGLPl~-mdG~e 126 (178)
++|||||.|++++|.++-| +. ..+.+ ++|.... ....+.|.+++++|+|+.++|--|+- .|.+-
T Consensus 1 MrILGIDPGl~~tG~gvi~~~g~~~~~~~~v~~G~I~t~~~~~~~~RL~~I~~~l~~~i~~~~Pd~vaiE~~F~~~n~~s 80 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVAVEGKGALKARLLHGEVVKTSPQEPAKERVGRIHARVLEVLHRFRPEAVAVEEQFFYRQNEL 80 (166)
T ss_dssp CEEEEEECCSSEEEEEEEEECSSSSSCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHHCCSEEEEECCCCSSCSHH
T ss_pred CEEEEEccccCceEEEEEEecCCccceEEEEEeCeEECCCCCCHHHHHHHHHHHHHHHHHHhCCCEEEEeehhhccChHH
Confidence 4899999999999999987 32 33333 6675432 13567999999999999999999983 33332
Q ss_pred CHHHHHHHHHHHHHHHHhccCCCcEEEE
Q 030386 127 TPQSNKVRSVAGRLAVRAAERSFSDILI 154 (178)
Q Consensus 127 ~~~a~~Vr~Fa~~L~~~~~~~glpV~lv 154 (178)
.-..-.++-.+.....+ +|+||+.+
T Consensus 81 al~lgqarGv~~la~~~---~glpv~ey 105 (166)
T 4ep4_A 81 AYKVGWALGAVLVAAFE---AGVPVYAY 105 (166)
T ss_dssp HHHHHHHHHHHHHHHHH---HTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHH---cCCCEEEE
Confidence 22333445555444433 37899887
No 5
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=97.39 E-value=0.0022 Score=50.70 Aligned_cols=90 Identities=14% Similarity=0.118 Sum_probs=56.3
Q ss_pred ceEEEEecCCceEEEEeec--CCc--ccccEEEEccC-------hhHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHH
Q 030386 63 GFSLGVDLGLSRTGLALSK--GFC--VRPLTVLKLRG-------EKLELQLLEIAQREETDEFIIGLPKSWDGSETPQSN 131 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD--~~~--A~Pl~tI~~~~-------~~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~ 131 (178)
++|||||.|+.++|.|+-+ +.. .--.+++.... ....+.|.+++++|+|+.++|=-+.--.+..+ ...
T Consensus 1 m~ILGIDPGl~~tG~gvi~~~g~~~~~v~~G~i~t~~~~~~~Rl~~i~~~l~~~i~~~~Pd~vaiE~vf~~~n~~s-~~~ 79 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQPDYFAIEQVFMAKNADS-ALK 79 (158)
T ss_dssp CEEEEEECCSSEEEEEEEEEETTEEEEEEEEEEECCCSCHHHHHHHHHHHHHHHHHHHCCSEEEEEECCCCCCTTT-HHH
T ss_pred CEEEEEccCCCCeeEEEEEecCCeEEEEEeeEEECCCCCHHHHHHHHHHHHHHHHHHcCCCEEEEeecccccChHH-HHH
Confidence 4799999999999999997 321 22234554321 13466899999999999999999985322222 122
Q ss_pred HHHHHHHHHHHHhccCCCcEEEE
Q 030386 132 KVRSVAGRLAVRAAERSFSDILI 154 (178)
Q Consensus 132 ~Vr~Fa~~L~~~~~~~glpV~lv 154 (178)
-.+..+-.+. .+..+|+||+.+
T Consensus 80 lgqarGv~~~-a~~~~~ipv~ey 101 (158)
T 1hjr_A 80 LGQARGVAIV-AAVNQELPVFEY 101 (158)
T ss_dssp HHHHHHHHHH-HHHTTTCCEEEE
T ss_pred HHHHHHHHHH-HHHHcCCCEEEE
Confidence 2222222222 222358999876
No 6
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=96.19 E-value=0.032 Score=54.09 Aligned_cols=90 Identities=19% Similarity=0.266 Sum_probs=63.0
Q ss_pred CCCceEEEEecCC-ceEEEEeecC--C-c----ccccEEEEccC-hhHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHH
Q 030386 60 WRGGFSLGVDLGL-SRTGLALSKG--F-C----VRPLTVLKLRG-EKLELQLLEIAQREETDEFIIGLPKSWDGSETPQS 130 (178)
Q Consensus 60 ~~~~rILgLD~G~-KRIGVAiSD~--~-~----A~Pl~tI~~~~-~~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a 130 (178)
+.+.++||+|.|- .-+.+|+-|. - . ..|.. +... ....+.|.+++++|+|+.|+||- |+. +
T Consensus 326 ~~~~~vlg~dpg~r~g~k~a~vd~~G~~l~~~~iy~~~--~~~~~~~~~~~l~~li~~~~~~~IaIGn-----gta---s 395 (785)
T 3bzc_A 326 AGPRATLGLDPGLRTGVKVAVVDATGKLLDTATVYPHA--PKNQWDQTLAVLAALCAKHQVELIAIGN-----GTA---S 395 (785)
T ss_dssp CCSCCEEEEECCSSSCEEEEEECTTSCEEEEEEECCSG--GGCCHHHHHHHHHHHHHHHTCCEEEEES-----STT---H
T ss_pred CCCCeEEEECCCCcCceEEEEECCCCCEEEEEEEecCC--chhHHHHHHHHHHHHHHHcCCCEEEECC-----Ccc---C
Confidence 4567899999994 4467888883 1 1 12221 0111 34668999999999999999993 553 5
Q ss_pred HHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 131 NKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 131 ~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
+..++|+..+.+..+...+++++++|..+
T Consensus 396 ret~~~v~~l~~~~~~~~i~~v~v~e~gA 424 (785)
T 3bzc_A 396 RETDKLAGELIKKYPGMKLTKIMVSEAGA 424 (785)
T ss_dssp HHHHHHHHHHHHHCGGGCCEEEEECCHHH
T ss_pred HHHHHHHHHHHHhcccCCCCEEEEcCCcC
Confidence 67778888887766423589999999763
No 7
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=95.42 E-value=0.089 Score=52.41 Aligned_cols=96 Identities=19% Similarity=0.062 Sum_probs=58.8
Q ss_pred ceEEEEecCCce-----EEEEeec--CC-c----ccccEEEEccC-hhHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHH
Q 030386 63 GFSLGVDLGLSR-----TGLALSK--GF-C----VRPLTVLKLRG-EKLELQLLEIAQREETDEFIIGLPKSWDGSETPQ 129 (178)
Q Consensus 63 ~rILgLD~G~KR-----IGVAiSD--~~-~----A~Pl~tI~~~~-~~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~ 129 (178)
.++||||+|.+. +-+|+-| |- . ..|... .... .+..+.|.+++++|+|+.|+||- |+
T Consensus 519 ~~VlaldpG~~~~~~~g~k~a~vd~~G~~l~~~~i~~~~~-~~~~~~~~~~~l~~li~~~~~~~IaIGn-----~s---- 588 (1030)
T 3psf_A 519 PKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKIVDNPF-DKTNPEKFEDTLDNIIQSCQPNAIGING-----PN---- 588 (1030)
T ss_dssp CCEEEEECTTCCTTTSCEEEEEECTTSCEEEEEEECSCTT-CSSCCHHHHHHHHHHHHHHCCSEEEECC-----SS----
T ss_pred CeEEEecCCCCCCCCCCeEEEEECCCCCEEEEEEEcCCCC-ChhhHHHHHHHHHHHHHHcCCcEEEECC-----CC----
Confidence 489999999863 5567777 32 1 112111 2112 34558999999999999999995 32
Q ss_pred HHHHHHHHHHHHHHhcc--------CCCcEEEEcCCC----chhhhHHHHHH
Q 030386 130 SNKVRSVAGRLAVRAAE--------RSFSDILITAIF----SFSCHFAIFFT 169 (178)
Q Consensus 130 a~~Vr~Fa~~L~~~~~~--------~glpV~lvDERl----STs~~~a~~~~ 169 (178)
..+++|.+.+.+.+++ .+++|+++||.- |.|..++-=||
T Consensus 589 -~et~~l~~~l~~~i~~~~~~~~~~~~i~~~iV~e~gAsvYsaS~~A~~EfP 639 (1030)
T 3psf_A 589 -PKTQKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEVAIRYQNSERAAQEFP 639 (1030)
T ss_dssp -THHHHHHHHHHHHHHHTTCBCTTSCBCCEEECCCTTHHHHHTSHHHHHHST
T ss_pred -HHHHHHHHHHHHHHHhhccccccCCCccEEEecchHHHHHHhhHHHHHhCc
Confidence 1444554444433221 247999999975 33444444444
No 8
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=95.19 E-value=0.097 Score=52.99 Aligned_cols=85 Identities=18% Similarity=0.049 Sum_probs=54.7
Q ss_pred ceEEEEecCCce-----EEEEeec--CC-cc----cccEEEEccC-hhHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHH
Q 030386 63 GFSLGVDLGLSR-----TGLALSK--GF-CV----RPLTVLKLRG-EKLELQLLEIAQREETDEFIIGLPKSWDGSETPQ 129 (178)
Q Consensus 63 ~rILgLD~G~KR-----IGVAiSD--~~-~A----~Pl~tI~~~~-~~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~ 129 (178)
.++||||+|.+. +-+|+-| |- .. .|... .... ....+.|.+++++++|+.|+||- |+
T Consensus 516 ~~VlaldpG~r~~g~~g~k~a~vD~~G~vl~~~~i~~~~~-~~~~~~~a~~~l~~li~~~~~~vIaIGn-----~s---- 585 (1219)
T 3psi_A 516 PKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKIVDNPF-DKTNPEKFEDTLDNIIQSCQPNAIGING-----PN---- 585 (1219)
T ss_dssp CCEEEEECTTCCTTTTCEEEEEECTTSCEEEEEEECSCTT-CSSCSHHHHHHHHHHHHHHCCSEEEECC-----SS----
T ss_pred CeEEEecCCCCCCCCCceEEEEECCCCCEEEEEEEcCCCC-ChhhHHHHHHHHHHHHHHcCCcEEEECC-----CC----
Confidence 489999999873 5567777 32 11 12111 2111 34558999999999999999995 32
Q ss_pred HHHHHHHHHHHHHHhc--------cCCCcEEEEcCCC
Q 030386 130 SNKVRSVAGRLAVRAA--------ERSFSDILITAIF 158 (178)
Q Consensus 130 a~~Vr~Fa~~L~~~~~--------~~glpV~lvDERl 158 (178)
+.+++|.+.+.+.++ ..+++|+++||.-
T Consensus 586 -ret~~l~~~l~~~i~~~~~~~~~~~~i~vviV~e~g 621 (1219)
T 3psi_A 586 -PKTQKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEV 621 (1219)
T ss_dssp -THHHHHHHHHHHHHHHTTCBCSSSCBCCEEECCCTT
T ss_pred -HHHHHHHHHHHHHHHhhccccccCCCccEEEECchH
Confidence 345555555544322 1247999999975
No 9
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=93.83 E-value=0.17 Score=42.09 Aligned_cols=91 Identities=19% Similarity=0.192 Sum_probs=53.2
Q ss_pred eEEEEecCCceEEEEeecCCcccccEEEEcc--C-hhHHHHHHHHHHH------cCCCEEEEeecCCCCCCCCHH--HHH
Q 030386 64 FSLGVDLGLSRTGLALSKGFCVRPLTVLKLR--G-EKLELQLLEIAQR------EETDEFIIGLPKSWDGSETPQ--SNK 132 (178)
Q Consensus 64 rILgLD~G~KRIGVAiSD~~~A~Pl~tI~~~--~-~~~~~~L~~iI~e------~~v~~IVVGLPl~mdG~e~~~--a~~ 132 (178)
.++|+|+|..+|-+++.|.....-...++.. . +..++.+.+++++ .++..|.||.|=..|...+.. +..
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~ 81 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGKRLLSKVVVPTPKEGGERVAEALAEAAERAEREAGVRGEAIGLGTPGPLDFRRGVIRFAPN 81 (302)
T ss_dssp CEEEEEECSSEEEEEEECSSSBSCCEEEECCSSCHHHHHHHHHHHHHHHHHHHTCCCSSEEEEESSCEETTTTEEC---C
T ss_pred EEEEEEEcCCEEEEEEEeCCCcEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccCCceEEEEEecccEeCCCCEEEcCCC
Confidence 6899999999999999993211111222211 1 2344444444443 579999999995443221111 000
Q ss_pred H-----HHHHHHHHHHhccCCCcEEEEcCC
Q 030386 133 V-----RSVAGRLAVRAAERSFSDILITAI 157 (178)
Q Consensus 133 V-----r~Fa~~L~~~~~~~glpV~lvDER 157 (178)
. ..+.+.|++++ ++||++.+.-
T Consensus 82 ~~~w~~~~l~~~l~~~~---~~pv~v~NDa 108 (302)
T 3vov_A 82 IPGVQDFPIRRILEEAT---GRPVFLENDA 108 (302)
T ss_dssp CTTCTTCCHHHHHHHHH---SSCEEEEEHH
T ss_pred CCCcCCCChHHHHHHhh---CCCEEEEech
Confidence 0 23567788887 5799887653
No 10
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=93.34 E-value=0.33 Score=40.39 Aligned_cols=92 Identities=17% Similarity=0.092 Sum_probs=53.1
Q ss_pred CCCceEEEEecCCceEEEEeec--CC-cccccE-EEEc--cC-hhHHHHHHH----HHHHc------CCCEEEEeecCCC
Q 030386 60 WRGGFSLGVDLGLSRTGLALSK--GF-CVRPLT-VLKL--RG-EKLELQLLE----IAQRE------ETDEFIIGLPKSW 122 (178)
Q Consensus 60 ~~~~rILgLD~G~KRIGVAiSD--~~-~A~Pl~-tI~~--~~-~~~~~~L~~----iI~e~------~v~~IVVGLPl~m 122 (178)
++.+.++|+|+|..+|=+++.| +. .++-.. .... .+ +..++.+.+ ++++. ++.+|-||.|=-.
T Consensus 3 ~M~~~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi~~pG~v 82 (347)
T 2ch5_A 3 FMAAIYGGVEGGGTRSEVLLVSEDGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGGD 82 (347)
T ss_dssp SSSCEEEEEEECTTCEEEEEEETTSCEEEEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETTTT
T ss_pred ccceEEEEEEcCccceEEEEEeCCCCEEEEEeCCCCCcccCCHHHHHHHHHHHHHHHHHhcCCCcccceeEEEEeccCCC
Confidence 3445899999999999999988 32 221110 0000 11 223444444 44432 5788999999543
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCC
Q 030386 123 DGSETPQSNKVRSVAGRLAVRAAERSFSDILITAI 157 (178)
Q Consensus 123 dG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDER 157 (178)
|.. .-..+.+.|+++++..++||++.+.-
T Consensus 83 d~~------~~~~l~~~l~~~~~~~~~pv~v~NDa 111 (347)
T 2ch5_A 83 QED------AGRILIEELRDRFPYLSESYLITTDA 111 (347)
T ss_dssp CHH------HHHHHHHHHHHHCTTSBSCEEEEEHH
T ss_pred chH------HHHHHHHHHHHhcCCCCceEEEECcH
Confidence 321 22366777888873112689887653
No 11
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=91.17 E-value=0.18 Score=42.20 Aligned_cols=92 Identities=12% Similarity=0.202 Sum_probs=53.0
Q ss_pred ceEEEEecCCceEEEEeec--C-CcccccEEEEccChhHHHH----HHHHHHHcCCCEEEEeecCCCCCCCCHH-----H
Q 030386 63 GFSLGVDLGLSRTGLALSK--G-FCVRPLTVLKLRGEKLELQ----LLEIAQREETDEFIIGLPKSWDGSETPQ-----S 130 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD--~-~~A~Pl~tI~~~~~~~~~~----L~~iI~e~~v~~IVVGLPl~mdG~e~~~-----a 130 (178)
+.++|+|+|..+|=+++.| + +.++-....+...+..++. +.++.+++++..|.||.|=-.|...+.. -
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~~G~i~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~l 81 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDEEGRILSTFKVATPPTAEGIVDAICAAVAGASEGHDVEAVGIGAAGYVDDKRATVLFAPNI 81 (321)
T ss_dssp CEEEEEEECSSEEEEEEECTTCCBCCCEEEECCSSHHHHHHHHHHHHHHHHTTCCEEEEEEEESSEECTTSSCEEECSSS
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEEEEeeCCCCHHHHHHHHHHHHHHHHhhcCceEEEEeccccEeCCCCEEEeCCCC
Confidence 3689999999999999999 2 2221111111111333444 4444445678899999994333221110 0
Q ss_pred H-HHHHHHHHHHHHhccCCCcEEEEcCC
Q 030386 131 N-KVRSVAGRLAVRAAERSFSDILITAI 157 (178)
Q Consensus 131 ~-~Vr~Fa~~L~~~~~~~glpV~lvDER 157 (178)
. .-..+++.|++++ ++||++.+.-
T Consensus 82 ~w~~~~l~~~l~~~~---~~pv~v~NDa 106 (321)
T 3vgl_A 82 DWRHEPLKDKVEQRV---GLPVVVENDA 106 (321)
T ss_dssp CCEEECHHHHHHHHH---CSCEEEEEHH
T ss_pred CCcCCCHHHHHhhhh---CCCEEEEehh
Confidence 0 0023466788887 5799887654
No 12
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=90.73 E-value=0.85 Score=38.15 Aligned_cols=89 Identities=11% Similarity=0.034 Sum_probs=57.7
Q ss_pred ceEEEEecCCceEEEEeecC--C-cccccEEEEccC-hhHHHHHHHHHHHcCCCEEEEeecCCCCCCC----------CH
Q 030386 63 GFSLGVDLGLSRTGLALSKG--F-CVRPLTVLKLRG-EKLELQLLEIAQREETDEFIIGLPKSWDGSE----------TP 128 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD~--~-~A~Pl~tI~~~~-~~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e----------~~ 128 (178)
..++|+|+|..+|=+|+.|. . ..+ ..++... +..++.+.+.++++++.+|-||.|=-.|... ++
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~~G~il~~--~~~~t~~~~~~l~~i~~~~~~~~i~gigi~~pG~vd~~~~~~~~G~i~~~~ 80 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGREDGTIIDR--IEFPTXMPDETIEXVIQYFSQFSLQAIGIGSFGPVDNDXTSQTYGTITATP 80 (302)
T ss_dssp CCEEEEEECSSEEEEEEECTTSCEEEE--EEEECCCHHHHHHHHHHHHTTSCCSEEEEEECSSEECCTTSTTTTEECCCS
T ss_pred cEEEEEEECcceeEEEEEECCCcEEEE--EEecCCChHHHHHHHHHHhccCCceEEEEEeceeeccccccccccEEecCC
Confidence 46899999999999999982 2 221 2222222 4566788888888899999999984333111 11
Q ss_pred HHH-HHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 129 QSN-KVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 129 ~a~-~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
.-. .=..+++.|++++ ++||++.+.
T Consensus 81 ~~~w~~~~l~~~l~~~~---~~pV~v~ND 106 (302)
T 3epq_A 81 XAGWRHYPFLQTVXNEM---XIPVGFSTD 106 (302)
T ss_dssp STTTBTCCHHHHHHHHH---CSCEEEEEH
T ss_pred CCCccCCChHHHHHHHh---CCCEEEech
Confidence 100 0024567788887 689888764
No 13
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=88.90 E-value=0.97 Score=37.46 Aligned_cols=89 Identities=15% Similarity=0.163 Sum_probs=52.1
Q ss_pred ceEEEEecCCceEEEEeec--CC-cccccEEEEc--cC-hhHHHHHHHHHHHc-----CCCEEEEeecCCCC---CCCC-
Q 030386 63 GFSLGVDLGLSRTGLALSK--GF-CVRPLTVLKL--RG-EKLELQLLEIAQRE-----ETDEFIIGLPKSWD---GSET- 127 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD--~~-~A~Pl~tI~~--~~-~~~~~~L~~iI~e~-----~v~~IVVGLPl~md---G~e~- 127 (178)
+.++|+|+|..+|=+++.| +. +.+ ..+.. .. +...+.|.+++++. .+..|.||.|=-.| |...
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~g~il~~--~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~i~~igi~~pG~vd~~~g~v~~ 101 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDSTRRLQWE--KRVPTPHTSYSAFLDAVCELVEEADQRFGVKGSVGIGIPGMPETEDGTLYA 101 (327)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEE--EEEECCCSCHHHHHHHHHHHHHHHHHHHTSCCEEEEEESSBSCCTTSCCBC
T ss_pred ceEEEEEECCCEEEEEEEeCCCCEEEE--EEecCCCCCHHHHHHHHHHHHHHHHHhcCCccEEEEEeeeeEECCCCEEEc
Confidence 4699999999999999998 32 221 11111 12 33445555555432 37889999995433 3221
Q ss_pred ---HHHHHHHHHHHHHHHHhccCCCcEEEEcCC
Q 030386 128 ---PQSNKVRSVAGRLAVRAAERSFSDILITAI 157 (178)
Q Consensus 128 ---~~a~~Vr~Fa~~L~~~~~~~glpV~lvDER 157 (178)
+.-+ =..+.+.|++++ ++||++.+.-
T Consensus 102 ~~~~~~~-~~~l~~~l~~~~---~~pv~v~NDa 130 (327)
T 2ap1_A 102 ANVPAAS-GKPLRADLSARL---DRDVRLDNDA 130 (327)
T ss_dssp TTCTTTT-TSCHHHHHHHHH---TSCEEEEEHH
T ss_pred cCCCccC-CCChHHHHHHHH---CCCEEEecHH
Confidence 1111 113466788777 5798877654
No 14
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=88.54 E-value=4.2 Score=35.08 Aligned_cols=90 Identities=11% Similarity=0.138 Sum_probs=53.7
Q ss_pred eEEEEecCCceEEEEeecCCcccccEEEEcc-----C-----hhH---HHHHHHHHHHc-----CCCEEEEeecCCC---
Q 030386 64 FSLGVDLGLSRTGLALSKGFCVRPLTVLKLR-----G-----EKL---ELQLLEIAQRE-----ETDEFIIGLPKSW--- 122 (178)
Q Consensus 64 rILgLD~G~KRIGVAiSD~~~A~Pl~tI~~~-----~-----~~~---~~~L~~iI~e~-----~v~~IVVGLPl~m--- 122 (178)
.+||||+|...|=+|+.|.-...-...++.. . ... .+.+.+++++. ++.+| ||.|=..
T Consensus 3 ~vlgidiGgt~ik~al~d~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~gI-i~~pG~vd~~ 81 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDERMVKMQNFSHSPDELGRFQKILDQLEFREKIARQFVEETGYSLSSFSAF-VSRGGLLDPI 81 (381)
T ss_dssp EEEEEEECSSEEEEEEEETTEEEEEEEEECCHHHHHTCSSGGGGHHHHHHHHHHHHHTTTCCGGGCSEE-EEECCSCSCB
T ss_pred eEEEEECCccceeEEEEecchheeeeecccCcccccchhhHHHHHHHHHHHHHHHHHHcCCCccCceEE-EecCCCCCCC
Confidence 6899999999999999983111001112211 0 112 45666666654 47889 9998433
Q ss_pred CCCC------------------CHHHHHHHHHHHHHHHHhccCCCcEEEEcCCC
Q 030386 123 DGSE------------------TPQSNKVRSVAGRLAVRAAERSFSDILITAIF 158 (178)
Q Consensus 123 dG~e------------------~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERl 158 (178)
.|.. .+..-. -.+++.|++++ ++||+..|.-.
T Consensus 82 ~G~~~~i~~~~~~~l~~~~~~~~~~nl~-~~l~~~l~~~~---~~Pv~v~NDan 131 (381)
T 1saz_A 82 PGGVYLVDGLMIKTLKSGKNGEHASNLG-AIIAHRFSSET---GVPAYVVDPVV 131 (381)
T ss_dssp CSSEEECCHHHHHHHHHTTTCCCTTHHH-HHHHHHHHHHH---CCCEEEESCTT
T ss_pred CCceEecCHHHHHHHHhcccccChhhhh-HHHHHHHHHhc---CCCEEEeCCCc
Confidence 3433 111112 24567788887 68999877765
No 15
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=88.50 E-value=0.76 Score=37.40 Aligned_cols=87 Identities=14% Similarity=-0.010 Sum_probs=55.2
Q ss_pred eEEEEecCCceEEEEeec--CC-cc---cccEEEEccChhHHHHHHHHHHHcCCCEEEEeecCCCC---CCC--CHHHH-
Q 030386 64 FSLGVDLGLSRTGLALSK--GF-CV---RPLTVLKLRGEKLELQLLEIAQREETDEFIIGLPKSWD---GSE--TPQSN- 131 (178)
Q Consensus 64 rILgLD~G~KRIGVAiSD--~~-~A---~Pl~tI~~~~~~~~~~L~~iI~e~~v~~IVVGLPl~md---G~e--~~~a~- 131 (178)
.++|+|+|..+|=+++.| +. .. .|.. ...+...+.+.+++++.++.+|.||.|=..| |.. .+.-.
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~il~~~~~~~~---~~~~~~~~~i~~~i~~~~i~gigi~~pG~vd~~~g~v~~~~~~~~ 81 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGKILDKTSISTP---ENLEDLLAWLDQRLSEQDYSGIAMSVPGAVNQETGVIDGFSAVPY 81 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCCEEEEEEECCC---SSHHHHHHHHHHHHTTSCCSEEEEEESSEECTTTCBEESCCSSGG
T ss_pred EEEEEEECCCEEEEEEECCCCCEEEEEEEeCC---CCHHHHHHHHHHHHHhCCCcEEEEEecCcccCCCCEEEecCCCCc
Confidence 589999999999999998 32 22 1221 1124566788888887789999999995333 321 11110
Q ss_pred -HHHHHHHHHHHHhccCCCcEEEEcCC
Q 030386 132 -KVRSVAGRLAVRAAERSFSDILITAI 157 (178)
Q Consensus 132 -~Vr~Fa~~L~~~~~~~glpV~lvDER 157 (178)
.-..+++.| +++ ++||++.+.-
T Consensus 82 ~~~~~l~~~l-~~~---~~pv~v~NDa 104 (292)
T 2gup_A 82 IHGFSWYEAL-SSY---QLPVHLENDA 104 (292)
T ss_dssp GSSSBHHHHT-GGG---CCCEEEEEHH
T ss_pred ccCCCHHHHH-HHc---CCCEEEechH
Confidence 012455667 666 6798886653
No 16
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=87.54 E-value=5.4 Score=32.42 Aligned_cols=84 Identities=21% Similarity=0.137 Sum_probs=58.9
Q ss_pred ceEEEEecCCceEEEEeecC-C-cccccEEEEccC-hhHHHHHHHHHHHc-----CCCEEEEeecCCCCCCCCHHHHHHH
Q 030386 63 GFSLGVDLGLSRTGLALSKG-F-CVRPLTVLKLRG-EKLELQLLEIAQRE-----ETDEFIIGLPKSWDGSETPQSNKVR 134 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD~-~-~A~Pl~tI~~~~-~~~~~~L~~iI~e~-----~v~~IVVGLPl~mdG~e~~~a~~Vr 134 (178)
+++||||--+..++||+.+. . .+. ...-.++- +.+...+.+++++. ++|.|+||.= -|+.+ --+.--
T Consensus 2 M~iLaIdTS~~~~svAl~~~~~~~~~-~~~~~~~Hs~~L~p~i~~~L~~a~~~~~dld~Iav~~G---PGsfT-glRig~ 76 (213)
T 3r6m_A 2 AKILAIDTATENCSVALLVNDQVISR-SEVAPRDHTKKVLPMVDEVLKEAGLTLQDLDALAFGRG---PGSFT-GVRIGI 76 (213)
T ss_dssp CCEEEEECSSSEEEEEEESSSCEEEE-EEECCSCCHHHHHHHHHHHHHTTTCCTTTCSEEEEEEE---SSCHH-HHHHHH
T ss_pred CEEEEEEccCcceEEEEEECCEEEEE-EEechHHHHHHHHHHHHHHHHHcCCCHHHccEEEEecC---CCchh-hHHHHH
Confidence 57999999999999999983 2 232 12111211 34667788888775 5889999862 17775 456677
Q ss_pred HHHHHHHHHhccCCCcEEEE
Q 030386 135 SVAGRLAVRAAERSFSDILI 154 (178)
Q Consensus 135 ~Fa~~L~~~~~~~glpV~lv 154 (178)
.+|+-|+..+ ++|++-+
T Consensus 77 ~~AkgLa~~~---~iPl~gV 93 (213)
T 3r6m_A 77 GIAQGLAFGA---ELPMIGV 93 (213)
T ss_dssp HHHHHHHHHT---TCCEEEE
T ss_pred HHHHHHHHHh---CCCEEEE
Confidence 8899998775 6788876
No 17
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=87.23 E-value=0.6 Score=38.37 Aligned_cols=92 Identities=15% Similarity=0.103 Sum_probs=51.6
Q ss_pred ceEEEEecCCceEEEEeec--CC-cccccEEEEc-cC-hhHHH----HHHHHHHHc-----CCCEEEEeecCCCC---CC
Q 030386 63 GFSLGVDLGLSRTGLALSK--GF-CVRPLTVLKL-RG-EKLEL----QLLEIAQRE-----ETDEFIIGLPKSWD---GS 125 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD--~~-~A~Pl~tI~~-~~-~~~~~----~L~~iI~e~-----~v~~IVVGLPl~md---G~ 125 (178)
+.++|+|+|...|=+++.| +. .++-...... .+ +..++ .+.+++++. ++..|.||.|=..| |.
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~il~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~igi~~pG~vd~~~g~ 85 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGVVQQKWSIETNILEDGKHIVPSIIESIRHRIDLYNMKKEDFVGIGMGTPGSVDIEKGT 85 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEECCCTTTTTTHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESSEEETTTTE
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHcCCCccceeEEEEecccceeCCCCE
Confidence 5799999999999999998 22 2211111111 11 22333 445555554 35678899995332 32
Q ss_pred C--CHHHHH-HH-HHHHHHHHHhccCCCcEEEEcCC
Q 030386 126 E--TPQSNK-VR-SVAGRLAVRAAERSFSDILITAI 157 (178)
Q Consensus 126 e--~~~a~~-Vr-~Fa~~L~~~~~~~glpV~lvDER 157 (178)
. ++.-.. -. .+++.|++++ ++||++.+.-
T Consensus 86 v~~~~~l~w~~~~~l~~~l~~~~---~~pv~v~ND~ 118 (326)
T 2qm1_A 86 VVGAYNLNWTTVQPVKEQIESAL---GIPFALDNDA 118 (326)
T ss_dssp EECBGGGTBCSCBCHHHHHHHHH---CSCEEEEEHH
T ss_pred EEecCCCCccCCchHHHHHHHHh---CCCEEEecHH
Confidence 1 111100 01 4567788887 5799887654
No 18
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=87.19 E-value=2 Score=34.94 Aligned_cols=83 Identities=16% Similarity=0.081 Sum_probs=49.4
Q ss_pred eEEEEecCCceEEEEeec--CC-cc---cccEEEEccC-hhHHHHHHHHHHHc---CCCEEEEeecCCCCCCCCHHHHHH
Q 030386 64 FSLGVDLGLSRTGLALSK--GF-CV---RPLTVLKLRG-EKLELQLLEIAQRE---ETDEFIIGLPKSWDGSETPQSNKV 133 (178)
Q Consensus 64 rILgLD~G~KRIGVAiSD--~~-~A---~Pl~tI~~~~-~~~~~~L~~iI~e~---~v~~IVVGLPl~mdG~e~~~a~~V 133 (178)
.++|+|+|...|=+++.| +. .+ .|.......+ +..++.+.+.+++. .+..+.||.|=. |... .+
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~igi~~~G~-~~~~-----~~ 76 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGNFIGEGSSGPGNYHNVGLTRAIENIKEAVKIAAKGEADVVGMGVAGL-DSKF-----DW 76 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSCEEEEEEESCCCHHHHCHHHHHHHHHHHHHHHHTSCCSEEEEEETTC-CSHH-----HH
T ss_pred EEEEEEeCCCcEEEEEEcCCCCEEEEEeCCCCCcccCCHHHHHHHHHHHHHHHHhcCCCEEEEEcCCC-Cchh-----HH
Confidence 689999999999999998 32 22 1211100011 23455555555442 278999999954 3211 12
Q ss_pred HHHHHHHHHHhccCCCcEEEEcC
Q 030386 134 RSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 134 r~Fa~~L~~~~~~~glpV~lvDE 156 (178)
..+.+.|++ + ++||++.+.
T Consensus 77 ~~l~~~l~~-~---~~pv~v~ND 95 (299)
T 2e2o_A 77 ENFTPLASL-I---APKVIIQHD 95 (299)
T ss_dssp HHHHHHHTT-S---SSEEEEEEH
T ss_pred HHHHHHHHh-C---CCCEEEeCc
Confidence 456666766 5 479988754
No 19
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=86.04 E-value=0.96 Score=38.80 Aligned_cols=90 Identities=16% Similarity=0.110 Sum_probs=51.6
Q ss_pred CceEEEEecCCceEEEEeec--C-CcccccEEEEccC-hhHHH----HHHHHHHHc-----CCCEEEEeecCCCCCCCC-
Q 030386 62 GGFSLGVDLGLSRTGLALSK--G-FCVRPLTVLKLRG-EKLEL----QLLEIAQRE-----ETDEFIIGLPKSWDGSET- 127 (178)
Q Consensus 62 ~~rILgLD~G~KRIGVAiSD--~-~~A~Pl~tI~~~~-~~~~~----~L~~iI~e~-----~v~~IVVGLPl~mdG~e~- 127 (178)
.+.++|+|+|...|=+++.| + ..++-.......+ +..++ .+.+++++. ++.+|.||.|=..|...+
T Consensus 84 ~~~~lgiDiG~t~i~~~l~d~~G~il~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~ 163 (406)
T 1z6r_A 84 AWHYLSLRISRGEIFLALRDLSSKLVVEESQELALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGI 163 (406)
T ss_dssp TCEEEEEEEETTEEEEEEEETTCCEEEEEEEECCSSCSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEEEESSEEETTTTE
T ss_pred ccEEEEEEEcCCEEEEEEEcCCCCEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhcCCCcCceeEEEEEeecCEeCCCCE
Confidence 36799999999999999998 3 2221111111111 23334 444444443 466888999854332111
Q ss_pred --------HHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 128 --------PQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 128 --------~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
.+.. ..+++.|++++ ++||++.+.
T Consensus 164 v~~~~~l~~w~~--~~l~~~l~~~~---~~pv~v~ND 195 (406)
T 1z6r_A 164 VHRMPFYEDVKE--MPLGEALEQHT---GVPVYIQHD 195 (406)
T ss_dssp EEECTTCTTCSS--BCHHHHHHHHH---SSCEEEEEH
T ss_pred EecCCCCCCccC--CCHHHHHHHHH---CCCEEEech
Confidence 1110 24567788877 579988765
No 20
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=85.65 E-value=1.4 Score=37.70 Aligned_cols=91 Identities=11% Similarity=0.066 Sum_probs=52.0
Q ss_pred ceEEEEecCCceEEEEeec--CC-cccccEEEEcc-C-hhHHHH----HHHHHHH-----cCCCEEEEeecCCCC---CC
Q 030386 63 GFSLGVDLGLSRTGLALSK--GF-CVRPLTVLKLR-G-EKLELQ----LLEIAQR-----EETDEFIIGLPKSWD---GS 125 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD--~~-~A~Pl~tI~~~-~-~~~~~~----L~~iI~e-----~~v~~IVVGLPl~md---G~ 125 (178)
+.++|+|+|...|=+++.| +. .++-....... + +..++. +.+++++ .++.+|.||.|=-.| |.
T Consensus 87 ~~~lGIDiGgt~i~~~l~d~~G~vl~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~ 166 (380)
T 2hoe_A 87 AYVLGIEVTRDEIAACLIDASMNILAHEAHPLPSQSDREETLNVMYRIIDRAKDMMEKLGSKLSALTVAAPGPIDTERGI 166 (380)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEESSCEETTTTE
T ss_pred CeEEEEEECCCEEEEEEECCCCCEEEEEEEccCCCCCHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEEeeccEECCCCE
Confidence 5789999999999999998 32 22211111111 2 223333 4444443 468899999995433 31
Q ss_pred C--CHHHH-HHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 126 E--TPQSN-KVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 126 e--~~~a~-~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
. .+.-. .=..+++.|++++ ++||++.+.
T Consensus 167 v~~~~~l~w~~~~l~~~l~~~~---~~pV~v~ND 197 (380)
T 2hoe_A 167 IIDPRNFPLSQIPLANLLKEKY---GIEVWVEND 197 (380)
T ss_dssp ECCCSSCTTBTSCHHHHHHHHH---CSEEEEEEH
T ss_pred EeccCCCCCcCCChHHHHHHHh---CCCEEEech
Confidence 1 11000 0014567788887 579888776
No 21
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=84.22 E-value=2.9 Score=36.35 Aligned_cols=91 Identities=18% Similarity=0.138 Sum_probs=57.2
Q ss_pred CceEEEEecCCceEEEEeec-C-CcccccEEEEcc--C-hhHHHHHHH---HHHHc---CCCEEEEeecCCCC---CCC-
Q 030386 62 GGFSLGVDLGLSRTGLALSK-G-FCVRPLTVLKLR--G-EKLELQLLE---IAQRE---ETDEFIIGLPKSWD---GSE- 126 (178)
Q Consensus 62 ~~rILgLD~G~KRIGVAiSD-~-~~A~Pl~tI~~~--~-~~~~~~L~~---iI~e~---~v~~IVVGLPl~md---G~e- 126 (178)
...++|+|+|..++-+++.| + +..+. ..++.. + +..++.|.+ .+++. ++.+|-||.|=-.| |..
T Consensus 8 ~~~~lgiDIGgt~i~~~l~d~G~il~~~-~~~~~~~~~~~~~l~~i~~~~~~i~~~~~~~i~gIGIavPG~Vd~~~G~i~ 86 (366)
T 3mcp_A 8 NRIVMTLDAGGTNFVFSAIQGGKEIADP-VVLPACADCLDKCLGNLVEGFKAIQAGLPEAPVAISFAFPGPADYQAGIIG 86 (366)
T ss_dssp CCEEEEEECSSSEEEEEEEETTEECSCC-EEEECCTTCHHHHHHHHHHHHHHHHTTCSSCCCEEEEECCSSEETTTTEEC
T ss_pred CCEEEEEEECcceEEEEEEECCEEEEEE-EEEECCCCCHHHHHHHHHHHHHHHHHHhhcCCeEEEEEecceEeCCCCEEE
Confidence 36799999999999999998 2 12322 122221 2 345566666 66664 79999999994433 321
Q ss_pred -CHHHHHHH---HHHHHHHHHhccCCCcEEEEcC
Q 030386 127 -TPQSNKVR---SVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 127 -~~~a~~Vr---~Fa~~L~~~~~~~glpV~lvDE 156 (178)
.+.-...+ .+++.|++++ ++||++.++
T Consensus 87 ~~~nlp~w~~~~~l~~~L~~~~---g~PV~veND 117 (366)
T 3mcp_A 87 DLPNFPSFRGGVALGPFLEDIF---GIPVFINND 117 (366)
T ss_dssp CCTTCGGGTTCBCHHHHHHHHH---CSCEEEECH
T ss_pred eCCCcccccCCCCHHHHHHHHH---CCCEEEech
Confidence 12111122 5567788887 689887665
No 22
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=83.42 E-value=2.7 Score=35.07 Aligned_cols=90 Identities=17% Similarity=0.217 Sum_probs=53.0
Q ss_pred ceEEEEecCCceEEEEeec--CC-cccccEEEEcc---ChhHHHHHHHHH----HHc--CCCEEEEeecCCCC---CCC-
Q 030386 63 GFSLGVDLGLSRTGLALSK--GF-CVRPLTVLKLR---GEKLELQLLEIA----QRE--ETDEFIIGLPKSWD---GSE- 126 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD--~~-~A~Pl~tI~~~---~~~~~~~L~~iI----~e~--~v~~IVVGLPl~md---G~e- 126 (178)
+.++|+|+|...|-+++.| +. ..+ ..++.. .+..++.+.+++ +++ ++.+|-||.|=..| |..
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~~G~il~~--~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~i~gigi~~pG~vd~~~g~v~ 84 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTAEGETLHC--EKKRTAEVIAPGLVSGIGEMIDEQLRRFNARCHGLVMGFPALVSKDKRTII 84 (310)
T ss_dssp EEEEEEEECSSEEEEEEEETTSCEEEE--EEEEHHHHHTTCHHHHHHHHHHHHHHHHTEEEEEEEEEESSCBCTTSSCBC
T ss_pred CEEEEEEeCCCEEEEEEECCCCCEEEE--EEecCccccHHHHHHHHHHHHHHHHHhcCCCeeEEEEeccccEeCCCCEEE
Confidence 5799999999999999998 22 221 111111 122344444444 333 35789999984333 321
Q ss_pred -CH---HHH-HHHHHHHHHHHHhccCCCcEEEEcCC
Q 030386 127 -TP---QSN-KVRSVAGRLAVRAAERSFSDILITAI 157 (178)
Q Consensus 127 -~~---~a~-~Vr~Fa~~L~~~~~~~glpV~lvDER 157 (178)
.+ +.. ....+++.|++++ ++||++.+.-
T Consensus 85 ~~~~l~~~~~~~~~l~~~l~~~~---~~pv~v~NDa 117 (310)
T 3htv_A 85 STPNLPLTAADLYDLADKLENTL---NCPVEFSRDV 117 (310)
T ss_dssp SCCSSSCCHHHHTTHHHHHHHHH---TSCEEEEEHH
T ss_pred eCCCCCCccccCccHHHHHHHHh---CCCEEEeeHH
Confidence 11 111 1135778888888 6899887653
No 23
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=83.36 E-value=1.6 Score=35.70 Aligned_cols=55 Identities=18% Similarity=0.190 Sum_probs=38.0
Q ss_pred ceEEEEecCCceEEEEeecCCcccccEEEEc---cC-hhHHHHHHHHHHHcCCCEEEEeecC
Q 030386 63 GFSLGVDLGLSRTGLALSKGFCVRPLTVLKL---RG-EKLELQLLEIAQREETDEFIIGLPK 120 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD~~~A~Pl~tI~~---~~-~~~~~~L~~iI~e~~v~~IVVGLPl 120 (178)
+.++|+|+|...|=++-.++.. ...++. .+ +...+.+.++++++++..|-||.|=
T Consensus 6 ~~~lgiDIGGT~i~~~d~~g~~---~~~~~t~~~~~~~~~~~~i~~~i~~~~i~gigi~~pG 64 (226)
T 3lm2_A 6 QTVLAIDIGGSHVKIGLSTDGE---ERKVESGKTMTGPEMVAAVTAMAKDMTYDVIAMGYPG 64 (226)
T ss_dssp CCEEEEEECSSEEEEEETTTCC---EEEEECCTTCCHHHHHHHHHHHTTTCCCSEEEEEESS
T ss_pred CEEEEEEECCCEEEEEECCCCE---EEEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEEEEe
Confidence 5799999999888754333322 122221 11 3567788888988899999999983
No 24
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=82.78 E-value=9.1 Score=32.31 Aligned_cols=94 Identities=16% Similarity=0.178 Sum_probs=57.8
Q ss_pred eEEEEecCCceEEEEeec-C-CcccccEEEEccC-------------hhHHHHHHHHHHH-----cCCCEEEEe-ecCCC
Q 030386 64 FSLGVDLGLSRTGLALSK-G-FCVRPLTVLKLRG-------------EKLELQLLEIAQR-----EETDEFIIG-LPKSW 122 (178)
Q Consensus 64 rILgLD~G~KRIGVAiSD-~-~~A~Pl~tI~~~~-------------~~~~~~L~~iI~e-----~~v~~IVVG-LPl~m 122 (178)
.+||||-+...+++|+-+ + +.+.-...+.+.. +.....+++++++ .++|.|+++ -|
T Consensus 2 ~iLgIdts~~~~~val~~~g~i~~~~~~~~~~~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~~did~Ia~~~GP--- 78 (330)
T 2ivn_A 2 LALGIEGTAHTLGIGIVSEDKVLANVFDTLTTEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGP--- 78 (330)
T ss_dssp CEEEEECSSSEEEEEEECSSCEEEEEEEECCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEEEES---
T ss_pred EEEEEEccCCCeEEEEEECCEEEEEEEEEeecccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCC---
Confidence 699999999999999987 3 2332211111100 1223456666666 467899884 34
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCchhhhHHHHH
Q 030386 123 DGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSFSCHFAIFF 168 (178)
Q Consensus 123 dG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlSTs~~~a~~~ 168 (178)
|..+. -+.-..||+.|...+ +.|++.+++- .+|.+.-|
T Consensus 79 -G~~~~-lrvg~~~ak~la~~~---~~pl~~v~h~---~aHa~~a~ 116 (330)
T 2ivn_A 79 -GLGPA-LRVVATAARALAVKY---RKPIVGVNHC---IAHVEITK 116 (330)
T ss_dssp -SCHHH-HHHHHHHHHHHHHHT---TCCEEEEEHH---HHHHHGGG
T ss_pred -CchHH-HHHHHHHHHHHHHHc---CCCEEeeCcH---HHHHHHHh
Confidence 33332 233456888888765 5799999874 46765543
No 25
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=82.62 E-value=3.2 Score=34.17 Aligned_cols=91 Identities=7% Similarity=0.064 Sum_probs=54.8
Q ss_pred ceEEEEecCCceEEEEeec--C-CcccccEEEEccC-hhHHHHHHHHHHH-cCCCEEEEeecCCCC---CCC--CHHHHH
Q 030386 63 GFSLGVDLGLSRTGLALSK--G-FCVRPLTVLKLRG-EKLELQLLEIAQR-EETDEFIIGLPKSWD---GSE--TPQSNK 132 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD--~-~~A~Pl~tI~~~~-~~~~~~L~~iI~e-~~v~~IVVGLPl~md---G~e--~~~a~~ 132 (178)
+.++|+|+|...|=+++.| + +.++-........ +..++.+.+.+++ .++.+|-||.|=..| |.. ++.-..
T Consensus 4 m~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~l~~ 83 (297)
T 4htl_A 4 MKIAAFDIGGTALKMGVVLPHGEIILTKSAEISGSDGDQILAEMKVFLAENTDVTGIAVSAPGYVNPKTGLITMGGAIRR 83 (297)
T ss_dssp CCEEEEEECSSEEEEEEECTTSCEEEEEEEECSTTCHHHHHHHHHHHHHTCTTCCEEEEEESSEECTTTCEEEECTTCGG
T ss_pred cEEEEEEeCCCeEEEEEECCCCCEEEEEEecCCCCCHHHHHHHHHHHHhhcCCeeEEEEecCcceeCCCCEEEeCCCCCC
Confidence 4799999999999999998 3 2222111111111 3455666666654 468899999995333 321 111101
Q ss_pred H--HHHHHHHHHHhccCCCcEEEEcC
Q 030386 133 V--RSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 133 V--r~Fa~~L~~~~~~~glpV~lvDE 156 (178)
. ..+.+.|++++ ++||++.+.
T Consensus 84 w~~~~l~~~l~~~~---~~pV~v~ND 106 (297)
T 4htl_A 84 FDNFNLKEWLEAET---GLPVAIEND 106 (297)
T ss_dssp GTTEEHHHHHHHHH---CSCEEEEEH
T ss_pred ccCCCHHHHHHHHH---CcCEEEecH
Confidence 1 24567788887 589888764
No 26
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=81.18 E-value=2.5 Score=34.06 Aligned_cols=93 Identities=10% Similarity=0.025 Sum_probs=52.6
Q ss_pred CceEEEEecCCceEEEEeec-C--CcccccEEEEcc---C-hhHHHHHHHHHHHc--------CCCEEEEeecCCC-CCC
Q 030386 62 GGFSLGVDLGLSRTGLALSK-G--FCVRPLTVLKLR---G-EKLELQLLEIAQRE--------ETDEFIIGLPKSW-DGS 125 (178)
Q Consensus 62 ~~rILgLD~G~KRIGVAiSD-~--~~A~Pl~tI~~~---~-~~~~~~L~~iI~e~--------~v~~IVVGLPl~m-dG~ 125 (178)
.+.++|+|+|..+|=+++.| . ....-...++.. + +..++.+.+++++. .+..|-||.|=.. +|.
T Consensus 11 ~~~~lgidiggt~i~~~l~dl~~g~i~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~igi~~pG~v~~g~ 90 (267)
T 1woq_A 11 NAPLIGIDIGGTGIKGGIVDLKKGKLLGERFRVPTPQPATPESVAEAVALVVAELSARPEAPAAGSPVGVTFPGIIQHGV 90 (267)
T ss_dssp CCCEEEEEECSSEEEEEEEETTTTEEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHTSTTCCCTTCCEEEEESSCEETTE
T ss_pred CCEEEEEEECCCEEEEEEEECCCCeEEEEEEecCCCccCCHHHHHHHHHHHHHHHHHhccccCccceEEEEccceEcCCE
Confidence 35799999999999999998 2 221111122211 2 23345555555442 3447999999432 332
Q ss_pred C--CHHH---HHHHHHHHHHHHHhccCCCcEEEEcCC
Q 030386 126 E--TPQS---NKVRSVAGRLAVRAAERSFSDILITAI 157 (178)
Q Consensus 126 e--~~~a---~~Vr~Fa~~L~~~~~~~glpV~lvDER 157 (178)
. ++.- -.=..+++.|++++ ++||++.++-
T Consensus 91 v~~~~~l~~~w~~~~l~~~l~~~~---~~pV~v~NDa 124 (267)
T 1woq_A 91 VHSAANVDKSWLNTDIDALLTARL---GRPVEVINDA 124 (267)
T ss_dssp ECCCTTSCGGGTTCBHHHHHHHHH---TSCEEEEEHH
T ss_pred EEeCCCCCCCCCCCCHHHHHHHHH---CCCEEEeehh
Confidence 2 1110 00124567788887 5798887653
No 27
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=79.70 E-value=22 Score=29.60 Aligned_cols=57 Identities=14% Similarity=0.096 Sum_probs=38.1
Q ss_pred eEEEEecCCceEEEEeecCCcccccEEEE--ccC-hhHHHHHHHHHHHcC-----CCEEEEeecC
Q 030386 64 FSLGVDLGLSRTGLALSKGFCVRPLTVLK--LRG-EKLELQLLEIAQREE-----TDEFIIGLPK 120 (178)
Q Consensus 64 rILgLD~G~KRIGVAiSD~~~A~Pl~tI~--~~~-~~~~~~L~~iI~e~~-----v~~IVVGLPl 120 (178)
.+|+||+|..+|=+|+-|+-.......+. .++ +.....|..++++++ ++.++|+-|.
T Consensus 3 MlL~IDIGNT~iK~gl~d~~~l~~~~r~~T~~~t~de~~~~l~~ll~~~~~~~~~I~~iiISSVv 67 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGDEIKLRFRHTSKVSTSDELGIFLKSVLRENNCSPETIRKIAICSVV 67 (266)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEEEEEEECSCCCHHHHHHHHHHHHHTTTCCGGGCCEEEEEESC
T ss_pred eEEEEEECCCeEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHcCCChhhceEEEEecch
Confidence 58999999999999998852111111111 122 334567888888765 8899999884
No 28
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=79.22 E-value=6.1 Score=32.89 Aligned_cols=87 Identities=16% Similarity=0.115 Sum_probs=52.7
Q ss_pred CceEEEEecCCceEEEEeec-C--CcccccEEEEccC-hhHHHHHHHHHHHc--CCCEEEEeecCCCCCCC-----CHHH
Q 030386 62 GGFSLGVDLGLSRTGLALSK-G--FCVRPLTVLKLRG-EKLELQLLEIAQRE--ETDEFIIGLPKSWDGSE-----TPQS 130 (178)
Q Consensus 62 ~~rILgLD~G~KRIGVAiSD-~--~~A~Pl~tI~~~~-~~~~~~L~~iI~e~--~v~~IVVGLPl~mdG~e-----~~~a 130 (178)
.+.++|+|+|...|=+|+.| . .+.. ...++... ....+.+.+++++. ++..|.||.|=-.|... -++.
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~~g~i~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~gigi~~pG~vd~~~~~~~nl~w~ 91 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIASGEISQ-AKTYSGLDYPSLEAVIRVYLEEHKVEVKDGCIAIACPITGDWVAMTNHTWA 91 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETTTCCEEE-EEEEEGGGCSCHHHHHHHHHHHSCCCCCEEEEEESSCCCSSEECCSSSCCC
T ss_pred CCEEEEEEechhheEEEEEECCCCcEEE-EEEecCCCcCCHHHHHHHHHHhcCCCccEEEEEEeCceeCCEEeeeCCCCc
Confidence 36799999999999999987 2 2211 12232221 23456677777764 57899999985443211 0121
Q ss_pred HHHHHHHHHHHHHhccCCCc-EEEEcC
Q 030386 131 NKVRSVAGRLAVRAAERSFS-DILITA 156 (178)
Q Consensus 131 ~~Vr~Fa~~L~~~~~~~glp-V~lvDE 156 (178)
+. .+.|++++ ++| |++.+.
T Consensus 92 --~~--~~~l~~~~---~~p~V~v~ND 111 (332)
T 1sz2_A 92 --FS--IAEMKKNL---GFSHLEIIND 111 (332)
T ss_dssp --EE--HHHHHHHH---TCSEEEEEEH
T ss_pred --CC--HHHHHHHh---CCCcEEEEeC
Confidence 22 35677777 577 887664
No 29
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=77.74 E-value=5 Score=32.33 Aligned_cols=91 Identities=15% Similarity=0.098 Sum_probs=53.9
Q ss_pred eEEEEecCCceEEEEeec--CC-cccccEEEEcc-C-hhHHHHHHHHHHHc--CCCEEEEeecCCCCCCC-----CHHHH
Q 030386 64 FSLGVDLGLSRTGLALSK--GF-CVRPLTVLKLR-G-EKLELQLLEIAQRE--ETDEFIIGLPKSWDGSE-----TPQSN 131 (178)
Q Consensus 64 rILgLD~G~KRIGVAiSD--~~-~A~Pl~tI~~~-~-~~~~~~L~~iI~e~--~v~~IVVGLPl~mdG~e-----~~~a~ 131 (178)
.++|+|+|..+|=+++.| +. .++-....... + +...+.|.+.+++. ++..|.||.|=..|... ++.-.
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~igi~~pG~vd~~~g~v~~~~~~~ 81 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHNLG 81 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEEEEEECCSSCCHHHHHHHHHHHHTTTGGGCSEEEEEESSEEETTEEECSSGGGGG
T ss_pred eEEEEEeCCCEEEEEEECCCCCEEEEEEecCCCCCCHHHHHHHHHHHHHHHHhhCCEEEEEeccceeCCCCEEEeCCCCC
Confidence 589999999999999998 22 22111111111 1 34567777777664 35689999985333221 11110
Q ss_pred HH--HHHHHHHHHHhccCCCcEEEEcCC
Q 030386 132 KV--RSVAGRLAVRAAERSFSDILITAI 157 (178)
Q Consensus 132 ~V--r~Fa~~L~~~~~~~glpV~lvDER 157 (178)
.- ..+++.|++++ ++||++.+.-
T Consensus 82 ~w~~~~l~~~l~~~~---~~pv~v~NDa 106 (289)
T 2aa4_A 82 GLLHFPLVKTLEQLT---NLPTIAINDA 106 (289)
T ss_dssp GGTTCCHHHHHHHHH---CSCEEEEEHH
T ss_pred cccCCChHHHHHHHH---CCCEEEechH
Confidence 01 24567788887 5798887643
No 30
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=76.41 E-value=4.6 Score=33.48 Aligned_cols=90 Identities=13% Similarity=0.022 Sum_probs=52.8
Q ss_pred CCceEEEEecCCceEEEEeecC--C-cccccEEEEcc---C-hhHHHHHHHHHH-----HcCCCEEEEeecCCCC---CC
Q 030386 61 RGGFSLGVDLGLSRTGLALSKG--F-CVRPLTVLKLR---G-EKLELQLLEIAQ-----REETDEFIIGLPKSWD---GS 125 (178)
Q Consensus 61 ~~~rILgLD~G~KRIGVAiSD~--~-~A~Pl~tI~~~---~-~~~~~~L~~iI~-----e~~v~~IVVGLPl~md---G~ 125 (178)
....++|+|+|..+|=+++.|. . ..+- .++.. + +..++.+.+.++ ..++..|.||.|=-.| |.
T Consensus 17 ~~~~~lgidiggt~i~~~l~d~~g~il~~~--~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~i~gigi~~pG~vd~~~g~ 94 (321)
T 3r8e_A 17 FQGMILGIDVGGTSVKFGLVTPEGEIQNAT--RFMTADWVNGIGFVESMKLEIGNFLKQYPIVKGVGIGWPGLVSLDRTK 94 (321)
T ss_dssp --CCEEEEECCSSEEEEEEECTTCCEEEEE--EEEHHHHHTTTCHHHHHHHHHHHHHHHCTTCCEEEEEESSEECTTSCC
T ss_pred cCcEEEEEEECCCEEEEEEEcCCCcEEEEE--EEeCCCCCCHHHHHHHHHHHHHHHHhccCCeeEEEEEecccEECCCCE
Confidence 3468999999999999999992 2 2211 22211 1 233444444443 3579999999994333 32
Q ss_pred CC--H----HHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 126 ET--P----QSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 126 e~--~----~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
.. + +.. ..+++.|+++++ ++||++.+.
T Consensus 95 v~~~~~l~~w~~--~~l~~~l~~~~~--~~pV~v~ND 127 (321)
T 3r8e_A 95 VILLPNIPSVVN--VPIVEILRSEFP--HIHFKIEND 127 (321)
T ss_dssp EEEBTTBCCCCS--CCHHHHHHHHCT--TSEEEEEEH
T ss_pred EEeCCCCccccC--CCHHHHHHHHcC--CCCEEEEch
Confidence 11 1 111 245667887763 579988765
No 31
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=76.26 E-value=13 Score=30.02 Aligned_cols=91 Identities=21% Similarity=0.130 Sum_probs=60.5
Q ss_pred eEEEEecCCceEEEEeec-CC-cccccEEEEccC--hhHHHHHHHHHHHcC-----CCEEEEeecCCCCCCCCHHHHHHH
Q 030386 64 FSLGVDLGLSRTGLALSK-GF-CVRPLTVLKLRG--EKLELQLLEIAQREE-----TDEFIIGLPKSWDGSETPQSNKVR 134 (178)
Q Consensus 64 rILgLD~G~KRIGVAiSD-~~-~A~Pl~tI~~~~--~~~~~~L~~iI~e~~-----v~~IVVGLPl~mdG~e~~~a~~Vr 134 (178)
.+||||--+..+++|+.+ +. .+. .....+. +.+...+.+++++.+ +|.|+||.= -|+.+- -+.-.
T Consensus 2 ~iL~idTs~~~~sval~~~~~~~~~--~~~~~~~h~~~l~~~i~~~L~~a~~~~~did~Iav~~G---PGsftg-lRig~ 75 (231)
T 2gel_A 2 RILAIDTATEACSVALWNNGTINAH--FELCPREHTQRILPMVQEILAASGASLNEIDALAFGRG---PGSFTG-VRIGI 75 (231)
T ss_dssp EEEEEECSSSEEEEEEEETTEEEEE--EEECCSCCHHHHHHHHHHHHHHTTCCGGGCSEEEEECC---SSCHHH-HHHHH
T ss_pred eEEEEECCCcCeEEEEEECCEEEEE--EhhhhHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC---CChhHh-HHHHH
Confidence 699999999999999987 32 221 1121122 346677888887765 789999752 266654 45556
Q ss_pred HHHHHHHHHhccCCCcEEEEcCCCchhhhHHHHHH
Q 030386 135 SVAGRLAVRAAERSFSDILITAIFSFSCHFAIFFT 169 (178)
Q Consensus 135 ~Fa~~L~~~~~~~glpV~lvDERlSTs~~~a~~~~ 169 (178)
.+|+.|...+ ++|++-++ ++.|+.+.
T Consensus 76 ~~ak~la~~~---~~Pl~~V~------~l~a~a~~ 101 (231)
T 2gel_A 76 GIAQGLALGA---NLPMIGVS------TLATMAQG 101 (231)
T ss_dssp HHHHHHHHTT---TCCEEEEC------HHHHHHHH
T ss_pred HHHHHHHHHc---CCCEEEec------cHHHHHHH
Confidence 8899998665 67988764 55555443
No 32
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=76.05 E-value=7.8 Score=32.32 Aligned_cols=87 Identities=14% Similarity=0.108 Sum_probs=50.6
Q ss_pred eEEEEecCCceEEEEeec--CC-cccccEEEEcc--C-hhHHHHHHHHHH----Hc-CCCEEEEeecCCCC---CCCC--
Q 030386 64 FSLGVDLGLSRTGLALSK--GF-CVRPLTVLKLR--G-EKLELQLLEIAQ----RE-ETDEFIIGLPKSWD---GSET-- 127 (178)
Q Consensus 64 rILgLD~G~KRIGVAiSD--~~-~A~Pl~tI~~~--~-~~~~~~L~~iI~----e~-~v~~IVVGLPl~md---G~e~-- 127 (178)
.++|+|+|..+|=+++.| +. .++ ..++.. + +..++.|.++++ +. .+..|.||.|=-.| |...
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~il~~--~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~gigi~~pG~vd~~~g~v~~~ 102 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLERVAT--ERVPTPTDDYPLLLETIAGLVAKYDQEFACEGKIGLGLPGMEDADDATVLTV 102 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEE--EEEECCTTCHHHHHHHHHHHHHHHHHHHTSCCEEEEEESEEECTTTCCEEES
T ss_pred EEEEEEECCCEEEEEEEeCCCcEEEE--EEecCCCCCHHHHHHHHHHHHHHHHHhcCCccEEEEEeeccEeCCCCEEEcC
Confidence 689999999999999999 22 221 122211 2 234444544443 32 46789999984322 3211
Q ss_pred --HHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 128 --PQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 128 --~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
++- .=..+.+.|++++ ++||++.+.
T Consensus 103 ~~~~~-~~~~l~~~l~~~~---~~pV~v~ND 129 (327)
T 4db3_A 103 NVPAA-KGKPLRADLEAKI---GRSVKIEND 129 (327)
T ss_dssp SSGGG-TTSCHHHHHHHHH---SSCCEEEEH
T ss_pred CCccc-cCCCHHHHHHHHH---CCCEEEecc
Confidence 010 1124567788887 579887765
No 33
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=73.02 E-value=1.7 Score=36.74 Aligned_cols=20 Identities=20% Similarity=0.380 Sum_probs=17.4
Q ss_pred CceEEEEecCCceEEEEeec
Q 030386 62 GGFSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 62 ~~rILgLD~G~KRIGVAiSD 81 (178)
.+.++|||+|+..++||+.+
T Consensus 22 ~~~viGID~GTt~s~va~~~ 41 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQ 41 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEE
T ss_pred cCCEEEEEcCCccEEEEEEE
Confidence 46799999999999999876
No 34
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=72.73 E-value=2.3 Score=36.25 Aligned_cols=20 Identities=20% Similarity=0.383 Sum_probs=17.1
Q ss_pred CceEEEEecCCceEEEEeec
Q 030386 62 GGFSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 62 ~~rILgLD~G~KRIGVAiSD 81 (178)
++.++|||+|+..+++|+.+
T Consensus 12 ~~~vvGIDlGTt~s~va~~~ 31 (409)
T 4gni_A 12 ERVVIGITFGNSNSSIAHTV 31 (409)
T ss_dssp -CCEEEEEECSSEEEEEEEE
T ss_pred CCcEEEEEcCCCeEEEEEEe
Confidence 46799999999999999863
No 35
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=72.47 E-value=4.9 Score=34.81 Aligned_cols=90 Identities=17% Similarity=0.163 Sum_probs=51.1
Q ss_pred CceEEEEecCCceEEEEeec--CC-cccccEEEEccC-hhHHHH----HHHHHHHc-----CCCEEEEeecCCCC---CC
Q 030386 62 GGFSLGVDLGLSRTGLALSK--GF-CVRPLTVLKLRG-EKLELQ----LLEIAQRE-----ETDEFIIGLPKSWD---GS 125 (178)
Q Consensus 62 ~~rILgLD~G~KRIGVAiSD--~~-~A~Pl~tI~~~~-~~~~~~----L~~iI~e~-----~v~~IVVGLPl~md---G~ 125 (178)
.+.++|+|+|...|=+++.| +. .++-.......+ +..++. +.+++++. ++.+|.||.|=-.| |.
T Consensus 107 ~~~~lGIDiGgt~i~~~l~d~~G~il~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~ 186 (429)
T 1z05_A 107 GWQFLSMRLGRGYLTIALHELGGEVLIDTKIDIHEIDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNSEQGI 186 (429)
T ss_dssp TEEEEEEEEETTEEEEEEEETTSCEEEEEEEECCCCBHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEEESSEEETTTTE
T ss_pred CCEEEEEEECCCEEEEEEECCCCCEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHhcCCCcCceEEEEEeccCcEeCCCCe
Confidence 35789999999999999998 32 221111111112 233344 44455443 35578899985333 31
Q ss_pred CC--H---HHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 126 ET--P---QSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 126 e~--~---~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
.. + +.. ..+++.|++++ ++||++.+.
T Consensus 187 v~~~~~l~w~~--~~l~~~L~~~~---~~pV~v~ND 217 (429)
T 1z05_A 187 VLQMPHYNVKN--LALGPEIYKAT---GLPVFVAND 217 (429)
T ss_dssp EEECSSSBCSS--BCHHHHHHHHH---CSCEEEEEH
T ss_pred EeecCCCCCCC--CCHHHHHHHHh---CCCEEEech
Confidence 10 1 110 24567788887 579888765
No 36
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=71.44 E-value=4.3 Score=33.77 Aligned_cols=89 Identities=13% Similarity=0.001 Sum_probs=49.7
Q ss_pred ceEEEEecCCceEEEEeec--CC-cccccEEEEc-cC-hhHHHHHHHHH----HH-----cCCCEEEEeecCCCC---CC
Q 030386 63 GFSLGVDLGLSRTGLALSK--GF-CVRPLTVLKL-RG-EKLELQLLEIA----QR-----EETDEFIIGLPKSWD---GS 125 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD--~~-~A~Pl~tI~~-~~-~~~~~~L~~iI----~e-----~~v~~IVVGLPl~md---G~ 125 (178)
..++|+|+|...|=+++.| +. .+. ...+. .. ...++.+.+.+ ++ .++.+|.||.|=..| |.
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~~G~il~~--~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~ 107 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSMKGEIVKK--YTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPREGI 107 (343)
T ss_dssp EEEEEEEECSSEEEEEEEETTSCEEEE--EEEECCSSHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEESSEEETTTTE
T ss_pred cEEEEEEECCCEEEEEEECCCCcEEEE--EEEcCCCCHHHHHHHHHHHHHHHHHhcccccCceEEEEEecccCEeCCCCE
Confidence 5789999999999999998 32 221 11111 12 23334444433 32 246788999985332 31
Q ss_pred CC--HHH---HHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 126 ET--PQS---NKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 126 e~--~~a---~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
.. +.. -.=..+++.|++++ ++||++.+.
T Consensus 108 v~~~~~~~~~w~~~~l~~~l~~~~---~~pv~v~ND 140 (343)
T 2yhw_A 108 VLHSTKLIQEWNSVDLRTPLSDTL---HLPVWVDND 140 (343)
T ss_dssp EEECCTTSSSCSSEECHHHHHHHH---CSCEEEEEH
T ss_pred EEeCCcCCCCCcCCCHHHHHHHHH---CCCEEEech
Confidence 10 100 00023467788877 579888764
No 37
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=69.50 E-value=16 Score=32.04 Aligned_cols=86 Identities=14% Similarity=0.118 Sum_probs=39.0
Q ss_pred EEEEecCCceEEEEeec--CC--c-ccccEEEEccChhHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHH
Q 030386 65 SLGVDLGLSRTGLALSK--GF--C-VRPLTVLKLRGEKLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGR 139 (178)
Q Consensus 65 ILgLD~G~KRIGVAiSD--~~--~-A~Pl~tI~~~~~~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~ 139 (178)
++|+|+|...+=+|..+ +. . -.|.+-++ ..+++-+.|+++.++ ++...|=+-=.+-.....+.+-|..-++.
T Consensus 2 iiG~DIGGAn~K~a~~~~~g~~~~~~~~~PlW~-~~~~L~~~l~~~~~~--~~~~avtMTgELaD~f~~k~eGV~~I~~~ 78 (334)
T 3cet_A 2 ILGIDIGGANTKITELHENGEFKVHHLYFPMWK-NNDKLAEVLKTYSND--VSHVALVTTAELADSYETKKEGVDNILNA 78 (334)
T ss_dssp EEEEEEC--CEEEEEECSTTCCEEEEC------------------------CCEEEEEECCC------CTTHHHHHHHHH
T ss_pred eeEEEecccceeeeeecCCCceEEEEEecCCcC-CchHHHHHHHHHHhh--hccEEEEechhhhhhhcCHHHHHHHHHHH
Confidence 79999999999999655 33 1 13333332 223444555555543 35555433333333455678889888899
Q ss_pred HHHHhccCCCcEEEEcC
Q 030386 140 LAVRAAERSFSDILITA 156 (178)
Q Consensus 140 L~~~~~~~glpV~lvDE 156 (178)
++++|+ .+|+++.=
T Consensus 79 v~~~~~---~~v~i~~~ 92 (334)
T 3cet_A 79 AESAFG---SNISVFDS 92 (334)
T ss_dssp HHHHHT---TCEEEECS
T ss_pred HHHhcC---CceEEEec
Confidence 998884 36766543
No 38
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=68.53 E-value=2.2 Score=38.44 Aligned_cols=21 Identities=19% Similarity=0.224 Sum_probs=18.7
Q ss_pred CCceEEEEecCCceEEEEeec
Q 030386 61 RGGFSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 61 ~~~rILgLD~G~KRIGVAiSD 81 (178)
..|.++|||+|...+=+++-|
T Consensus 59 E~G~~laiDlGGTnirv~lV~ 79 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILIS 79 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEE
T ss_pred ccceEEEEEeCCCeEEEEEEE
Confidence 468899999999999999887
No 39
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=66.02 E-value=40 Score=27.30 Aligned_cols=83 Identities=11% Similarity=-0.012 Sum_probs=46.7
Q ss_pred EEEEecCCceEEEEeec-C-Cccccc-EEEEc-c-C-hhHHHHHHHHHHH------cCCCEEEEeecCCCCCCCCHHHHH
Q 030386 65 SLGVDLGLSRTGLALSK-G-FCVRPL-TVLKL-R-G-EKLELQLLEIAQR------EETDEFIIGLPKSWDGSETPQSNK 132 (178)
Q Consensus 65 ILgLD~G~KRIGVAiSD-~-~~A~Pl-~tI~~-~-~-~~~~~~L~~iI~e------~~v~~IVVGLPl~mdG~e~~~a~~ 132 (178)
++|||.|..+|=+++.| + +..+-. ++-.. . + +..++.|.+.+++ .++..|.||.|=- . .+..
T Consensus 2 ~lgiDiGGT~~~~~l~d~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~i~~igig~pG~-~-~~~~---- 75 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAKEGKSLGRFQTSGINPFQQDRNEIDTALRSEVLPAIGQKASSIRAVYFYGAGC-T-PAKA---- 75 (291)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEECCCTTTSCHHHHHHHHTTTTHHHHTTSTTTCCEEEEEETTC-C-TTTH----
T ss_pred EEEEEeCccceEEEEEeCCeEEEEEECCCCCcccCCHHHHHHHHHHHHHHHhCCCcccccEEEEECCCC-C-hHHH----
Confidence 79999999999888887 2 122111 01000 1 2 2344555555443 3578899999943 1 1111
Q ss_pred HHHHHHHHHHHhccCCCcEEEEc
Q 030386 133 VRSVAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 133 Vr~Fa~~L~~~~~~~glpV~lvD 155 (178)
..+.+.|+++++. ..||+..+
T Consensus 76 -~~l~~~l~~~~~~-~~pv~v~N 96 (291)
T 1zbs_A 76 -PMLNEALDSMLPH-CDRIEVAG 96 (291)
T ss_dssp -HHHHHHHHHHSTT-CSEEEEEC
T ss_pred -HHHHHHHHHhcCC-CCcEEEeC
Confidence 2667778877631 03776654
No 40
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=65.87 E-value=26 Score=29.82 Aligned_cols=88 Identities=9% Similarity=0.058 Sum_probs=55.4
Q ss_pred CCceEEEEecCCceEEEEeecC--CcccccEEEEc-----------cC--hhHHHHHHHHHHH-----cCCCEEEEeecC
Q 030386 61 RGGFSLGVDLGLSRTGLALSKG--FCVRPLTVLKL-----------RG--EKLELQLLEIAQR-----EETDEFIIGLPK 120 (178)
Q Consensus 61 ~~~rILgLD~G~KRIGVAiSD~--~~A~Pl~tI~~-----------~~--~~~~~~L~~iI~e-----~~v~~IVVGLPl 120 (178)
..+.|||||--...+++|+-+. +.+.-...+.+ +. +.....+++++++ .++|.|+|+.=
T Consensus 4 ~~M~iLgIdts~~~~svAl~~~~~i~~~~~~~~~~~~gGv~p~~a~~~H~~~l~~~i~~~L~~ag~~~~did~Iav~~g- 82 (334)
T 3eno_A 4 DPMIVLGLEGTAHTISCGIIDESRILAMESSMYRPKTGGIRPLDAAVHHSEVIDTVISRALEKAKISIHDIDLIGFSMG- 82 (334)
T ss_dssp CCCEEEEEECSSSEEEEEEEESSCCCEEEEEECCCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECS-
T ss_pred cCceEEEEECCCcCeEEEEEECCEEEEEEEEeeccccCCcCcchHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC-
Confidence 4578999999999999999883 33331122211 00 1244566666666 46899999851
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEc
Q 030386 121 SWDGSETPQSNKVRSVAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 121 ~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvD 155 (178)
-|..+. -+.-..+|+.|+..+ ++|++.++
T Consensus 83 --PG~~t~-lrvg~~~ak~La~~~---~~Pl~~v~ 111 (334)
T 3eno_A 83 --PGLAPS-LRVTATAARTISVLT---GKPIIGVN 111 (334)
T ss_dssp --SSCHHH-HHHHHHHHHHHHHHH---TCCCEEEC
T ss_pred --CCCcch-HHHHHHHHHHHhhcc---CCCeEEec
Confidence 133332 344557788888776 57998884
No 41
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=64.96 E-value=3.8 Score=34.24 Aligned_cols=19 Identities=37% Similarity=0.648 Sum_probs=17.3
Q ss_pred ceEEEEecCCceEEEEeec
Q 030386 63 GFSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD 81 (178)
+.++|||+|+..+++|+.+
T Consensus 18 ~~viGID~GTt~s~va~~~ 36 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMK 36 (394)
T ss_dssp CSCEEEEECSSEEEEEEEC
T ss_pred CCEEEEEeCcCcEEEEEEE
Confidence 5689999999999999876
No 42
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=64.90 E-value=3.8 Score=37.18 Aligned_cols=19 Identities=26% Similarity=0.552 Sum_probs=17.4
Q ss_pred ceEEEEecCCceEEEEeec
Q 030386 63 GFSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD 81 (178)
+.++|||+|+...+||+.+
T Consensus 4 ~~~iGIDlGTt~s~va~~~ 22 (554)
T 1yuw_A 4 GPAVGIDLGTTYSCVGVFQ 22 (554)
T ss_dssp CCCEEEEECSSEEEEEEEC
T ss_pred CCEEEEEeCcccEEEEEEE
Confidence 5689999999999999987
No 43
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=63.49 E-value=17 Score=30.09 Aligned_cols=55 Identities=15% Similarity=0.125 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
.+.+.|.+.+++.++..|++-.|.++.|..-+ -+++.++++ +. | -+..+||-++-
T Consensus 173 ~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~-l~~l~~la~----~~---~-~~li~De~~~~ 227 (409)
T 3kki_A 173 NNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAP-LAELVNISK----EF---G-CALLVDESHSL 227 (409)
T ss_dssp TCHHHHHHHHHHHCSCEEEEESBCTTTCCBCC-HHHHHHHHH----HH---T-CEEEEECTTTT
T ss_pred CCHHHHHHHHHhcCCeEEEECCCCCCCCCcCC-HHHHHHHHH----Hc---C-CEEEEECCccc
Confidence 35678899998888899999999999998777 344444433 33 2 37889999864
No 44
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=62.53 E-value=3.1 Score=34.86 Aligned_cols=18 Identities=28% Similarity=0.534 Sum_probs=16.3
Q ss_pred eEEEEecCCceEEEEeec
Q 030386 64 FSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 64 rILgLD~G~KRIGVAiSD 81 (178)
.++|||+|+..+++|+.+
T Consensus 3 ~~vGIDlGTt~s~va~~~ 20 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMD 20 (383)
T ss_dssp CCCEEECCSSEEEEEEEE
T ss_pred cEEEEEcCCCCEEEEEEE
Confidence 589999999999999885
No 45
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=62.44 E-value=17 Score=29.57 Aligned_cols=83 Identities=19% Similarity=0.084 Sum_probs=44.9
Q ss_pred ceEEEEecCCceEEEEeec--C-CcccccE-EEE-ccC-hhHHHH----HHHHHHHcCC-------CEEEEeecCCCCCC
Q 030386 63 GFSLGVDLGLSRTGLALSK--G-FCVRPLT-VLK-LRG-EKLELQ----LLEIAQREET-------DEFIIGLPKSWDGS 125 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD--~-~~A~Pl~-tI~-~~~-~~~~~~----L~~iI~e~~v-------~~IVVGLPl~mdG~ 125 (178)
..++|+|+|..+|=+++.| + +.++-.. +.. ... +..++. +.+++++.++ ..+.||.|=-.|..
T Consensus 11 ~~~lGiDiGgT~i~~~l~d~~G~il~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~i~~~~igig~pG~v~~~ 90 (305)
T 1zc6_A 11 RYLIGVDGGGTGTRIRLHASDGTPLAMAEGGASALSQGIAKSWQAVLSTLEAAFQQAGLPAAPASACAIGLGLSGVHNRQ 90 (305)
T ss_dssp CEEEEEEECSSCEEEEEEETTCCEEEEEEESCCCGGGCHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEEEEESCCCTTS
T ss_pred CEEEEEEcCccceEEEEEcCCCCEEEEEeCCCCCcccCHHHHHHHHHHHHHHHHHhcCCChhhhccceEEEEecCCCchH
Confidence 3799999999999999988 2 2221100 010 111 223444 4444444332 46889998543322
Q ss_pred CCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 126 ETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 126 e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
. .. .|+.++++ ++||++.+.
T Consensus 91 ~--~~--------~l~~~~~~-~~pv~v~ND 110 (305)
T 1zc6_A 91 W--AG--------EFESQAPG-FARLSLATD 110 (305)
T ss_dssp H--HH--------HHHHTCCC-CSEEEEECH
T ss_pred H--HH--------HHHHhCCC-CceEEEECC
Confidence 1 11 15555532 578877653
No 46
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=62.13 E-value=66 Score=26.57 Aligned_cols=79 Identities=9% Similarity=0.129 Sum_probs=45.8
Q ss_pred EEEEecCCceEEEEeecCCcccccEEEEc---cC-hhHHHHHHHHHHHc-----CCCEEEEeecCCCCCCCCHHHHHHHH
Q 030386 65 SLGVDLGLSRTGLALSKGFCVRPLTVLKL---RG-EKLELQLLEIAQRE-----ETDEFIIGLPKSWDGSETPQSNKVRS 135 (178)
Q Consensus 65 ILgLD~G~KRIGVAiSD~~~A~Pl~tI~~---~~-~~~~~~L~~iI~e~-----~v~~IVVGLPl~mdG~e~~~a~~Vr~ 135 (178)
+|+||+|..+|=+|+-|+-.......+.. +. +.....+.++++.+ +++.++|--+ .| .....
T Consensus 2 lL~IDIGNT~ik~gl~~~~~l~~~~r~~T~~~~t~de~~~~l~~ll~~~~~~~~~i~~iiISSV-------vp--~~~~~ 72 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGELRQHWRMETDRHKTEDEYGMLVKQLLEHEGLSFEDVKGIIVSSV-------VP--PIMFA 72 (268)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCGGGCCEEEEEES-------CH--HHHHH
T ss_pred EEEEEECcCcEEEEEEECCEEEEEEEecCCCcCCHHHHHHHHHHHHHHcCCCcccCcEEEEEcc-------Ch--hHHHH
Confidence 79999999999999998531111111211 11 23455677787766 4788888655 22 22234
Q ss_pred HHHHHHHHhccCCCcEEEEc
Q 030386 136 VAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 136 Fa~~L~~~~~~~glpV~lvD 155 (178)
+.+.+++.+ ++++++++
T Consensus 73 l~~~~~~~~---~~~~~~v~ 89 (268)
T 2h3g_X 73 LERMCEKYF---KIKPLVVG 89 (268)
T ss_dssp HHHHHHHHT---CCCCEECS
T ss_pred HHHHHHHHh---CCCeEEEc
Confidence 444455554 34566654
No 47
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=60.95 E-value=15 Score=31.09 Aligned_cols=59 Identities=14% Similarity=0.178 Sum_probs=37.4
Q ss_pred CceEEEEecCCceEEEEeecC----CcccccEE---EEccC-hhHHHHHHHHHHHc------CCCEEEEeecCC
Q 030386 62 GGFSLGVDLGLSRTGLALSKG----FCVRPLTV---LKLRG-EKLELQLLEIAQRE------ETDEFIIGLPKS 121 (178)
Q Consensus 62 ~~rILgLD~G~KRIGVAiSD~----~~A~Pl~t---I~~~~-~~~~~~L~~iI~e~------~v~~IVVGLPl~ 121 (178)
.+.++|+|+|..+|=+|+.|. . -..+.. ....+ +...+.|.+++++. ++..|.||.|=-
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~~~~~~-g~il~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~i~gigi~~pG~ 100 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVREGKNDS-VHACVTRYSMKRKDITEIIEFFNEIIELMPASVMKRVKAGVINVPGP 100 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEECGGGC-EEEEEEEEECTTCBGGGHHHHHHHHHHHSCHHHHTTEEEEEEEESSC
T ss_pred CCeEEEEEEccccEEEEEEecccCCC-ccEEEEeeecCCCCHHHHHHHHHHHHHHHhhcccccccEEEEEeecc
Confidence 357999999999999999873 2 111111 11112 34566777776653 466899999943
No 48
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=60.15 E-value=66 Score=25.86 Aligned_cols=83 Identities=13% Similarity=0.015 Sum_probs=58.2
Q ss_pred ceEEEEecCCceEEEEeecCC-cccccEEEEc-cC--hhHHHHHHHHHHHc-----CCCEEEEeecCCCCCCCCHHHHHH
Q 030386 63 GFSLGVDLGLSRTGLALSKGF-CVRPLTVLKL-RG--EKLELQLLEIAQRE-----ETDEFIIGLPKSWDGSETPQSNKV 133 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD~~-~A~Pl~tI~~-~~--~~~~~~L~~iI~e~-----~v~~IVVGLPl~mdG~e~~~a~~V 133 (178)
-.|||||=-+..++||+.+.- +. -..... +. +.+...+.+++++. ++|.|+||.= -|+.+. -+.-
T Consensus 12 ~~iLaidTS~~~~sval~~~~~~l--~~~~~~~r~Hse~L~p~i~~~L~~a~~~~~dld~Iav~~G---PGsfTG-lRiG 85 (218)
T 2a6a_A 12 HMNVLALDTSQRIRIGLRKGEDLF--EISYTGEKKHAEILPVVVKKLLDELDLKVKDLDVVGVGIG---PGGLTG-LRVG 85 (218)
T ss_dssp -CEEEEEECSSSEEEEEEETTEEE--EEEEESCGGGGGHHHHHHHHHHHHHTCCGGGCSEEEEECC---SSCHHH-HHHH
T ss_pred ceEEEEEcCCcCeEEEEEECCEEE--EEEecchHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC---CCchHh-HHHH
Confidence 369999999999999999732 11 122221 11 34566777877764 4789999852 278877 6778
Q ss_pred HHHHHHHHHHhccCCCcEEEE
Q 030386 134 RSVAGRLAVRAAERSFSDILI 154 (178)
Q Consensus 134 r~Fa~~L~~~~~~~glpV~lv 154 (178)
-.+|+.|+..+ ++|++-+
T Consensus 86 ~~~Ak~La~~~---~iPl~gV 103 (218)
T 2a6a_A 86 IATVVGLVSPY---DIPVAPL 103 (218)
T ss_dssp HHHHHHHHGGG---TCCEEEE
T ss_pred HHHHHHHHHHc---CCCEEEe
Confidence 88999998776 6798865
No 49
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=60.00 E-value=41 Score=23.52 Aligned_cols=41 Identities=7% Similarity=0.064 Sum_probs=28.8
Q ss_pred HHHHHHHHHHcC-CCEEEEeecCCCCCCCCHHHHHHHHHHHH
Q 030386 99 ELQLLEIAQREE-TDEFIIGLPKSWDGSETPQSNKVRSVAGR 139 (178)
Q Consensus 99 ~~~L~~iI~e~~-v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~ 139 (178)
...|.++.++++ -+..|||...+..+.+.+..+.+++|+++
T Consensus 48 ~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~ 89 (158)
T 3eyt_A 48 IPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHE 89 (158)
T ss_dssp HHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHH
T ss_pred hHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHH
Confidence 567788888876 45788888876544444456778888775
No 50
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=59.52 E-value=35 Score=28.27 Aligned_cols=58 Identities=17% Similarity=0.196 Sum_probs=37.2
Q ss_pred ceEEEEecCCceEEEEeec-C-Ccc-------cccEEEEcc---C-hhHHHHHHHHHHHcC--CCEEEEeecC
Q 030386 63 GFSLGVDLGLSRTGLALSK-G-FCV-------RPLTVLKLR---G-EKLELQLLEIAQREE--TDEFIIGLPK 120 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD-~-~~A-------~Pl~tI~~~---~-~~~~~~L~~iI~e~~--v~~IVVGLPl 120 (178)
..++|||+|+..|-+++.+ + ... .|-..+... + +.....|++++++.+ ...+++++|-
T Consensus 13 ~~~vgiDiGt~~i~~~~~~~~~~~i~~~g~~~~ps~~~~~g~i~d~~~~~~~ik~~~~~~~~~~~~v~~~i~~ 85 (377)
T 2ych_A 13 VEALGLEIGASALKLVEVSGNPPALKALASRPTPPGLLMEGMVAEPAALAQEIKELLLEARTRKRYVVTALSN 85 (377)
T ss_dssp CCCEEEEECSSEEEEEEEETTTTEEEEEEEEECCTTSEETTEESCHHHHHHHHHHHHHHHTCCCCEEEEEECG
T ss_pred CceEEEEeCCCeEEEEEEeCCceEEEEEEeEECCCCcccCCCcCCHHHHHHHHHHHHHHcCCCcceEEEEecC
Confidence 4689999999999888765 2 111 122222211 1 245677888888754 5678999984
No 51
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=58.47 E-value=64 Score=25.23 Aligned_cols=63 Identities=21% Similarity=0.199 Sum_probs=34.9
Q ss_pred CceEEEEecCCceEEEEeecCC---cc---cccEEEEccC----h---hHHHHHHHHHHH---cCCCEEEEeecCCCCC
Q 030386 62 GGFSLGVDLGLSRTGLALSKGF---CV---RPLTVLKLRG----E---KLELQLLEIAQR---EETDEFIIGLPKSWDG 124 (178)
Q Consensus 62 ~~rILgLD~G~KRIGVAiSD~~---~A---~Pl~tI~~~~----~---~~~~~L~~iI~e---~~v~~IVVGLPl~mdG 124 (178)
...+.|||+|+-.+=+++.|.. +. .|-..+.... + ..+.++.+.+++ ..+..+|+..|.....
T Consensus 27 ~~~~~gIDiGS~s~k~vi~~~~~~~l~~~~~~~~~l~~g~i~d~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~ 105 (272)
T 3h1q_A 27 PPYKVGVDLGTADIVLVVTDQEGIPVAGALKWASVVKDGLVVDYIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVG 105 (272)
T ss_dssp SCCEEEEECCSSEEEEEEECTTCCEEEEEEEECCCCBTTBCTTHHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC--
T ss_pred CCEEEEEEcccceEEEEEECCCCcEEEEEeecccccCCCEEEcHHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCH
Confidence 4579999999999988887732 11 1111121111 1 223344443333 3567899999986543
No 52
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=56.06 E-value=49 Score=29.53 Aligned_cols=86 Identities=17% Similarity=0.164 Sum_probs=53.5
Q ss_pred CceEEEEecCCceEEEEeec-C--CcccccEEEEc-----------cC--hhHHHHHHHHHHH---cCCCEEEEee-cCC
Q 030386 62 GGFSLGVDLGLSRTGLALSK-G--FCVRPLTVLKL-----------RG--EKLELQLLEIAQR---EETDEFIIGL-PKS 121 (178)
Q Consensus 62 ~~rILgLD~G~KRIGVAiSD-~--~~A~Pl~tI~~-----------~~--~~~~~~L~~iI~e---~~v~~IVVGL-Pl~ 121 (178)
.+.+||||-....+++|+-+ + +.+.-...+.+ +. +.....+.+++++ .++|.|+|+. |
T Consensus 5 ~m~iL~i~ts~~~~~~al~~~~~~~~~~~~~~~~~~~gg~~p~~a~~~h~~~l~~~i~~~l~~~~~~~id~ia~~~gP-- 82 (540)
T 3en9_A 5 PMICLGLEGTAEKTGVGIVTSDGEVLFNKTIMYKPPKQGINPREAADHHAETFPKLIKEAFEVVDKNEIDLIAFSQGP-- 82 (540)
T ss_dssp SCEEEEEECSSSEEEEEEEETTSCEEEEEEEECCCCCSSSSCCCHHHHHHHHHHHHHHHHHHHSCGGGCCEEEEEEES--
T ss_pred cceEEEEEcCccceEEEEEECCCeEEEEEEEeecCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCHhHCcEEEEecCC--
Confidence 47899999999999999987 3 23322222221 01 1233344555544 5799999876 3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEc
Q 030386 122 WDGSETPQSNKVRSVAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 122 mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvD 155 (178)
|..+ --+.-..+|+.|+..+ ++|++-++
T Consensus 83 --G~~~-~l~vg~~~ak~la~~~---~~p~~~v~ 110 (540)
T 3en9_A 83 --GLGP-SLRVTATVARTLSLTL---KKPIIGVN 110 (540)
T ss_dssp --SCHH-HHHHHHHHHHHHHHHH---TCCEEEEE
T ss_pred --Cchh-hHHHHHHHHHHHHHHh---CCCeeEec
Confidence 2222 2345567788888776 57998874
No 53
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=55.56 E-value=33 Score=28.03 Aligned_cols=57 Identities=16% Similarity=0.123 Sum_probs=34.7
Q ss_pred ceEEEEecCCceEEEEeecCC--ccc-ccEEEEccC-hhHHHHHHHHHH--HcCCCEEEEeec
Q 030386 63 GFSLGVDLGLSRTGLALSKGF--CVR-PLTVLKLRG-EKLELQLLEIAQ--REETDEFIIGLP 119 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD~~--~A~-Pl~tI~~~~-~~~~~~L~~iI~--e~~v~~IVVGLP 119 (178)
+.+|+||+|..+|=+|+-|+- ..+ -+.|-..+. +.....+..+++ .++++.++|.-|
T Consensus 3 ~M~L~IDIGNT~ik~gl~~~~~l~~~~r~~T~~~~t~de~~~~l~~l~~~~~~~i~~i~IsSV 65 (249)
T 3bex_A 3 PMYLLVDVGNTHSVFSITEDGKTFRRWRLSTGVFQTEDELFSHLHPLLGDAMREIKGIGVASV 65 (249)
T ss_dssp CEEEEEEECSSEEEEEEESSSSSCEEEEEECCTTCCHHHHHHHHHHHHGGGGGGEEEEEEEES
T ss_pred ceEEEEEECCCeEEEEEEECCEEEEEEEecCCCCCCHHHHHHHHHHHHhhccccCCEEEEEcC
Confidence 358999999999999998842 211 111111111 234456666664 346778888866
No 54
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=54.56 E-value=36 Score=28.09 Aligned_cols=56 Identities=11% Similarity=0.030 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
+.+.|.+.+++.++..|++-.|-+..|..-+.. .+++.++..++. | -...+||-++
T Consensus 170 d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~-~l~~i~~~a~~~----~-~~li~De~~~ 225 (437)
T 3g0t_A 170 LREKLESYLQTGQFCSIIYSNPNNPTWQCMTDE-ELRIIGELATKH----D-VIVIEDLAYF 225 (437)
T ss_dssp HHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHH-HHHHHHHHHHHT----T-CEEEEECTTT
T ss_pred CHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHH-HHHHHHHHHHHC----C-cEEEEEcchh
Confidence 678898888778899999999988888766543 355555544432 3 3677899886
No 55
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=52.83 E-value=40 Score=26.88 Aligned_cols=53 Identities=15% Similarity=0.060 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
+.+.|.+.++++++..+++=.|-+..|...+. +++.+++ +++ | -...+||.++
T Consensus 159 d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l-~~i~~l~----~~~---~-~~li~Dea~~ 211 (397)
T 3f9t_A 159 DEKFVKDAVEDYDVDGIIGIAGTTELGTIDNI-EELSKIA----KEN---N-IYIHVDAAFG 211 (397)
T ss_dssp CHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCH-HHHHHHH----HHH---T-CEEEEECTTG
T ss_pred CHHHHHHHHhhcCCeEEEEECCCCCCCCCCCH-HHHHHHH----HHh---C-CeEEEEcccc
Confidence 57889999988789999999999999987663 2333333 233 3 3788899886
No 56
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=52.69 E-value=8.5 Score=35.27 Aligned_cols=19 Identities=32% Similarity=0.622 Sum_probs=16.8
Q ss_pred ceEEEEecCCceEEEEeec
Q 030386 63 GFSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD 81 (178)
+.++|||+|+...+||+.+
T Consensus 2 ~~viGIDlGTT~S~Va~~~ 20 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp CCEEEEECCSSEEEEEEEE
T ss_pred CcEEEEEcCCCcEEEEEEE
Confidence 4699999999999999864
No 57
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=52.67 E-value=25 Score=31.40 Aligned_cols=21 Identities=29% Similarity=0.495 Sum_probs=18.3
Q ss_pred CCceEEEEecCCceEEEEeec
Q 030386 61 RGGFSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 61 ~~~rILgLD~G~KRIGVAiSD 81 (178)
+.+.+||||+|+..+=+++-|
T Consensus 24 M~~~~lgIDiGtts~k~~l~d 44 (520)
T 4e1j_A 24 MGGYILAIDQGTTSTRAIVFD 44 (520)
T ss_dssp CSCEEEEEEECSSEEEEEEEC
T ss_pred hhCeEEEEEeCCcceEEEEEC
Confidence 346799999999999999988
No 58
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=52.32 E-value=22 Score=28.66 Aligned_cols=56 Identities=7% Similarity=0.110 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccC--CCcEEEEcCCCc
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAER--SFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~--glpV~lvDERlS 159 (178)
+.+.|.+.++++++..|++-.|-+..|..-+.. .+++.++. .++. |+ ...+||-++
T Consensus 145 d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~-~l~~i~~~----~~~~~~~~-~li~De~~~ 202 (367)
T 3euc_A 145 DRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAA-DMEAIVRA----AQGSVCRS-LVVVDEAYQ 202 (367)
T ss_dssp CHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHH-HHHHHHHH----TBTTSCBC-EEEEECTTC
T ss_pred CHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHH-HHHHHHHh----hhhcCCCc-EEEEeCcch
Confidence 568889989888899999999988888765432 34444433 3333 33 567899987
No 59
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=51.38 E-value=41 Score=24.45 Aligned_cols=56 Identities=11% Similarity=0.054 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEc
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvD 155 (178)
.+..+.+.+++.++..|+++-|.............+.+|.+.+++..++.+ +.++|
T Consensus 118 ~l~~~i~~~~~~~~~vil~~p~~~~~~~~~~~~~~~~~~n~~~~~~a~~~~--~~~vD 173 (216)
T 3rjt_A 118 TLRHLVATTKPRVREMFLLSPFYLEPNRSDPMRKTVDAYIEAMRDVAASEH--VPFVD 173 (216)
T ss_dssp HHHHHHHHHGGGSSEEEEECCCCCCCCTTSHHHHHHHHHHHHHHHHHHHHT--CCEEC
T ss_pred HHHHHHHHHHhcCCeEEEECCCcCCCCcchHHHHHHHHHHHHHHHHHHHcC--CeEEE
Confidence 345666666667888888874333333344456677777777666554433 55555
No 60
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=49.55 E-value=33 Score=28.02 Aligned_cols=55 Identities=13% Similarity=0.039 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHc---CCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCchh
Q 030386 98 LELQLLEIAQRE---ETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSFS 161 (178)
Q Consensus 98 ~~~~L~~iI~e~---~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlSTs 161 (178)
+.+.|.+.+++. ++..|++.-|.+..|..-+ -+++.++++ + . | -.+.+||-++.-
T Consensus 158 d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~-~~~l~~~~~---~-~---~-~~li~De~~~~~ 215 (398)
T 3a2b_A 158 NMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVN-LPELTSIAN---E-F---D-AAVMVDDAHSLG 215 (398)
T ss_dssp CHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCC-HHHHHHHHH---H-H---T-CEEEEECTTTTT
T ss_pred CHHHHHHHHHhhccCCceEEEEeCCCCCCCCccC-HHHHHHHHH---H-c---C-cEEEEECCCccc
Confidence 457788888775 6889999999998897765 344444433 2 2 3 267889999743
No 61
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=49.30 E-value=28 Score=30.37 Aligned_cols=59 Identities=15% Similarity=0.187 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCC---CHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSE---TPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e---~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
....+.+++.+++++.|||=.+-.+.+.. ....+.+.++.+.|+...++.|++|+++-.
T Consensus 301 i~~~~~~l~~~~~~~livID~l~~~~~~~~~~~~~~~~i~~i~~~Lk~lAke~~i~vi~~sq 362 (454)
T 2r6a_A 301 IRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQ 362 (454)
T ss_dssp HHHHHHHHHTTTCCCEEEEECGGGSCCSCC----CHHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEccHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEEec
Confidence 44567777778899999999997776432 124566677777776554444789999844
No 62
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=49.16 E-value=14 Score=25.68 Aligned_cols=42 Identities=5% Similarity=0.090 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEE
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILI 154 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lv 154 (178)
...+.|.+.++++++|.||+|-.- . ..++++-... .+||..+
T Consensus 96 ~~~~~I~~~a~~~~~dliV~G~~g----~---------sv~~~vl~~a---~~PVlvv 137 (138)
T 1q77_A 96 PLSEEVKKFVEGKGYELVVWACYP----S---------AYLCKVIDGL---NLASLIV 137 (138)
T ss_dssp CHHHHHHHHHTTSCCSEEEECSCC----G---------GGTHHHHHHS---SSEEEEC
T ss_pred CHHHHHHHHHHhcCCCEEEEeCCC----C---------chHHHHHHhC---CCceEee
Confidence 355788999999999999999652 2 4455555554 3577654
No 63
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=48.49 E-value=66 Score=22.40 Aligned_cols=41 Identities=12% Similarity=0.170 Sum_probs=28.0
Q ss_pred HHHHHHHHHHcCCC-EEEEeecCCCCCCCCHHHHHHHHHHHH
Q 030386 99 ELQLLEIAQREETD-EFIIGLPKSWDGSETPQSNKVRSVAGR 139 (178)
Q Consensus 99 ~~~L~~iI~e~~v~-~IVVGLPl~mdG~e~~~a~~Vr~Fa~~ 139 (178)
...|.++.+++.-. ..|||...+..+......+.+++|+++
T Consensus 50 ~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~ 91 (160)
T 3lor_A 50 VPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDE 91 (160)
T ss_dssp HHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHH
T ss_pred hHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHH
Confidence 56777777777643 788888876544444456777787765
No 64
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=48.19 E-value=38 Score=27.65 Aligned_cols=55 Identities=20% Similarity=0.236 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHH--------------HHHHHHHHHHHHHhccCCCcEEEE
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQS--------------NKVRSVAGRLAVRAAERSFSDILI 154 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a--------------~~Vr~Fa~~L~~~~~~~glpV~lv 154 (178)
.+.++.+.+.+.++|.|-||.|....-..++.- +.+-+.++++++.++ ++|+.+.
T Consensus 32 ~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~--~~Pi~~m 100 (262)
T 2ekc_A 32 TSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFP--DIPFLLM 100 (262)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT--TSCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcC--CCCEEEE
Confidence 445667777889999999999996322223322 344566777777653 3688774
No 65
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=47.90 E-value=31 Score=28.16 Aligned_cols=54 Identities=15% Similarity=0.224 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCC---CCCCCCHH-----------HHHHHHHHHHHHHHhccCCCcEEE
Q 030386 98 LELQLLEIAQREETDEFIIGLPKS---WDGSETPQ-----------SNKVRSVAGRLAVRAAERSFSDIL 153 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~---mdG~e~~~-----------a~~Vr~Fa~~L~~~~~~~glpV~l 153 (178)
.+.++.+.+.+.++|.|-||.|.. +||..-+. ...+-+.++++++.+. .+||++
T Consensus 32 ~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~--~~Pv~l 99 (268)
T 1qop_A 32 QSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHP--TIPIGL 99 (268)
T ss_dssp HHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCS--SSCEEE
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC--CCCEEE
Confidence 345566667788999999999996 56654332 2334466777877632 468876
No 66
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=47.82 E-value=32 Score=27.93 Aligned_cols=54 Identities=15% Similarity=0.151 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.++++++..|++-.|-+..|..-+. +.+++. .+.+ + -...+||-++-
T Consensus 152 d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~-~~l~~l----~~~~---~-~~li~De~~~~ 205 (369)
T 3cq5_A 152 DMDVALEEIRAKQPDIVFVTTPNNPTGDVTSL-DDVERI----INVA---P-GIVIVDEAYAE 205 (369)
T ss_dssp CHHHHHHHHHHHCCSEEEEESSCTTTCCCCCH-HHHHHH----HHHC---S-SEEEEECTTGG
T ss_pred CHHHHHHHhhccCCCEEEEeCCCCCCCCCCCH-HHHHHH----HHhC---C-CEEEEECCchh
Confidence 56788888877689999998898988987653 344443 3333 2 37889999863
No 67
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=47.21 E-value=39 Score=24.49 Aligned_cols=55 Identities=15% Similarity=0.028 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIF 158 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERl 158 (178)
...+.|.+.++++++|.||+|-.-. +|- .....-..++++-... .+||..+-...
T Consensus 111 ~~~~~I~~~a~~~~~DLIVmG~~g~-~~~---~~~~~Gsva~~vl~~a---~~pVlvv~~~~ 165 (175)
T 2gm3_A 111 DPKDVICQEVKRVRPDFLVVGSRGL-GRF---QKVFVGTVSAFCVKHA---ECPVMTIKRNA 165 (175)
T ss_dssp CHHHHHHHHHHHHCCSEEEEEECCC-C-----------CHHHHHHHHC---SSCEEEEECCG
T ss_pred CHHHHHHHHHHHhCCCEEEEeCCCC-Chh---hhhhcCchHHHHHhCC---CCCEEEEcCCc
Confidence 3567899999999999999998632 111 1112334556666554 47999886554
No 68
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=47.19 E-value=37 Score=29.49 Aligned_cols=60 Identities=12% Similarity=0.197 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCC--C---CHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGS--E---TPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~--e---~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
.....+.+++++++++.|||=..-.+.+. . ....+.+.++.+.|+...++.+++|++.-+
T Consensus 297 ~l~~~~~~l~~~~~~~lIvID~l~~~~~~~~~~~~~~r~~~i~~i~~~Lk~lAke~~v~vi~lsq 361 (444)
T 2q6t_A 297 EVRARARRLVSQNQVGLIIIDYLQLMSGPGSGKSGENRQQEIAAISRGLKALARELGIPIIALSQ 361 (444)
T ss_dssp HHHHHHHHHHHHSCCCEEEEECGGGCBCC-------CHHHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEcChhhcCCCcCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEEec
Confidence 35567788888999999999877666543 1 234566777777777665555889998854
No 69
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=46.84 E-value=21 Score=28.93 Aligned_cols=83 Identities=13% Similarity=-0.016 Sum_probs=36.3
Q ss_pred EEEEecCCceEEEEeec-C-Cccccc-EE--EEc-cChhHHH----HHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHH
Q 030386 65 SLGVDLGLSRTGLALSK-G-FCVRPL-TV--LKL-RGEKLEL----QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVR 134 (178)
Q Consensus 65 ILgLD~G~KRIGVAiSD-~-~~A~Pl-~t--I~~-~~~~~~~----~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr 134 (178)
++|||.|..+|=+++.| + +..+-. ++ ... ..+..++ .+.++....++..|.||.|=- + .+.. .
T Consensus 2 ~lgiDiGGT~i~~~l~d~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~igig~pG~-~-~~~~-----~ 74 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVLNGAVIKRLGTKGINPFFQSEEEIQQKLTASLLPQLPEGKFNAVYFYGAGC-T-PEKA-----P 74 (291)
T ss_dssp --CEECCTTCEEEEEECSSSEEEEEEECCCCTTTSCSTTTTTTTTC-------------CEEECTTC-C-TTTT-----H
T ss_pred EEEEEeccccEEEEEEcCCeEEEEEECCCCCcccCCHHHHHHHHHHHHHHhcCcccccEEEEEcCCC-C-HHHH-----H
Confidence 68999999988888876 2 122111 01 000 0112222 333333445688899999942 2 1111 2
Q ss_pred HHHHHHHHHhccCCCcEEEEc
Q 030386 135 SVAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 135 ~Fa~~L~~~~~~~glpV~lvD 155 (178)
.+.+.|+++++. ..||+..+
T Consensus 75 ~l~~~l~~~~~~-~~pv~v~N 94 (291)
T 1zxo_A 75 VLRRAIADSLPV-IGNIKANS 94 (291)
T ss_dssp HHHHHHHHHSCC-CSCCEEEC
T ss_pred HHHHHHHHhcCC-CceEEEEC
Confidence 566777777631 03777655
No 70
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=46.54 E-value=12 Score=33.30 Aligned_cols=18 Identities=28% Similarity=0.516 Sum_probs=16.4
Q ss_pred eEEEEecCCceEEEEeec
Q 030386 64 FSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 64 rILgLD~G~KRIGVAiSD 81 (178)
.++|||+|+..+++|+.+
T Consensus 3 ~~iGIDlGTt~s~va~~~ 20 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLE 20 (509)
T ss_dssp CEEEEEECSSEEEEEEEE
T ss_pred CEEEEEcCCceEEEEEEE
Confidence 689999999999999876
No 71
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=45.78 E-value=10 Score=34.82 Aligned_cols=18 Identities=28% Similarity=0.534 Sum_probs=15.9
Q ss_pred eEEEEecCCceEEEEeec
Q 030386 64 FSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 64 rILgLD~G~KRIGVAiSD 81 (178)
.++|||+|+..++||+.+
T Consensus 3 ~viGIDlGTt~s~va~~~ 20 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp -CEEEECCSSEEEEEEEE
T ss_pred CEEEEEcCCcCEEEEEEE
Confidence 589999999999999876
No 72
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=45.25 E-value=12 Score=34.17 Aligned_cols=91 Identities=21% Similarity=0.150 Sum_probs=49.1
Q ss_pred CCceEEEEecCCceEEEEeec--CC-----c--ccccEE-EEcc-ChhHH----HHHHHHHHHcCC----CEEEEee---
Q 030386 61 RGGFSLGVDLGLSRTGLALSK--GF-----C--VRPLTV-LKLR-GEKLE----LQLLEIAQREET----DEFIIGL--- 118 (178)
Q Consensus 61 ~~~rILgLD~G~KRIGVAiSD--~~-----~--A~Pl~t-I~~~-~~~~~----~~L~~iI~e~~v----~~IVVGL--- 118 (178)
..|.+||||+|...+=||+-+ +. . ..++++ +... .+.++ +.|.+.++++.. +.+-+|.
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~l~lGftfS 157 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGNHDFDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDEWYPDGVSEPLPLGFTFS 157 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESSSCEEEEEEEEECCTTGGGSBHHHHHHHHHHHHHHHHHHHCTTCCSSCEEEEEEEC
T ss_pred cceEEEEEEecCCeEEEEEEEECCCCceEEEEEEEecCchhccCCHHHHHHHHHHHHHHHHHHhcccccccccceEEEEe
Confidence 358999999999988888876 32 1 112111 1111 12344 356666677653 3466777
Q ss_pred -cCCCCC----CCCHHHHH-------HHHHHHHHHHHhccCCCcE
Q 030386 119 -PKSWDG----SETPQSNK-------VRSVAGRLAVRAAERSFSD 151 (178)
Q Consensus 119 -Pl~mdG----~e~~~a~~-------Vr~Fa~~L~~~~~~~glpV 151 (178)
|.+..+ ..-.+++- =+...+.|++.+.++|+||
T Consensus 158 fP~~q~~i~~g~li~wtKGF~i~~~~G~dv~~~L~~al~r~gl~v 202 (485)
T 3o8m_A 158 YPASQKKINSGVLQRWTKGFDIEGVEGHDVVPMLQEQIEKLNIPI 202 (485)
T ss_dssp SCEECSBTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHTTCCE
T ss_pred eeEEEcccCCEEEeeccccccCCCcCCccHHHHHHHHHHhcCCCc
Confidence 765432 11122200 0344555666665567885
No 73
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=45.10 E-value=51 Score=28.90 Aligned_cols=59 Identities=12% Similarity=0.076 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCC--CHHHHHHHHHHHHHHHHhccCCCcEEEEc
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSE--TPQSNKVRSVAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e--~~~a~~Vr~Fa~~L~~~~~~~glpV~lvD 155 (178)
.....+.+++++++++.|||=.=-.+.... ....+.+.++.+.|+...++.+++|+++-
T Consensus 341 ~i~~~i~~~~~~~~~~lvVID~l~~l~~~~~~~~~~~~~~~~~~~Lk~lak~~~i~vi~~~ 401 (503)
T 1q57_A 341 RLLAKLAYMRSGLGCDVIILDHISIVVSASGESDERKMIDNLMTKLKGFAKSTGVVLVVIC 401 (503)
T ss_dssp HHHHHHHHHHHTTCCSEEEEECTTCCCSCCSCCCHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEccchhcCCCCCCCCHHHHHHHHHHHHHHHHHHHCCeEEEEE
Confidence 455677888888999999996433333221 23456777777777766555588999873
No 74
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=44.59 E-value=74 Score=21.83 Aligned_cols=50 Identities=14% Similarity=0.140 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...+.|.+.++++++|.||+|-. . .+ . .+ .-..++++-... .+||..+-+
T Consensus 89 ~~~~~I~~~a~~~~~dliV~G~~-~-~~-~---~~-lgs~~~~vl~~~---~~pVlvv~~ 138 (141)
T 1jmv_A 89 DLGQVLSDAIEQYDVDLLVTGHH-Q-DF-W---SK-LMSSTRQVMNTI---KIDMLVVPL 138 (141)
T ss_dssp CHHHHHHHHHHHTTCCEEEEEEC-C-CC-H---HH-HHHHHHHHHTTC---CSEEEEEEC
T ss_pred CHHHHHHHHHHhcCCCEEEEeCC-C-ch-h---hh-hcchHHHHHhcC---CCCEEEeeC
Confidence 35578999999999999999987 3 22 1 11 235555555443 578888753
No 75
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=44.09 E-value=95 Score=23.39 Aligned_cols=55 Identities=13% Similarity=0.182 Sum_probs=32.9
Q ss_pred HHHHHHHHHHc--CCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEc
Q 030386 99 ELQLLEIAQRE--ETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 99 ~~~L~~iI~e~--~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvD 155 (178)
+..+.+.+++. +...+|+|.|-. .....+....+.+|-+.+++.++. ...|.++|
T Consensus 117 l~~~i~~l~~~~p~~~ii~~~~~p~-~~~~~~~~~~~~~~n~~l~~~~a~-~~~v~~iD 173 (232)
T 1es9_A 117 IKAIVQLVNERQPQARVVVLGLLPR-GQHPNPLREKNRRVNELVRAALAG-HPRAHFLD 173 (232)
T ss_dssp HHHHHHHHHHHSTTCEEEEECCCCC-SSSCCHHHHHHHHHHHHHHHHHHS-CTTEEEEC
T ss_pred HHHHHHHHHHHCCCCeEEEecCCCC-CCCchhHHHHHHHHHHHHHHHHhh-cCCCEEEe
Confidence 44555555555 456778887743 222235667788888888873322 24577776
No 76
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=43.72 E-value=54 Score=23.88 Aligned_cols=54 Identities=19% Similarity=0.241 Sum_probs=35.4
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAI 157 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDER 157 (178)
...+.|.+.++++++|.||+|-.-. -+-.....-..++++.+.. .+||..+-..
T Consensus 106 ~~~~~I~~~a~~~~~DLIV~G~~g~----~~~~~~~lGSva~~vl~~a---~~PVlvV~~~ 159 (163)
T 1tq8_A 106 APVDALVNLADEEKADLLVVGNVGL----STIAGRLLGSVPANVSRRA---KVDVLIVHTT 159 (163)
T ss_dssp SHHHHHHHHHHHTTCSEEEEECCCC----CSHHHHHTBBHHHHHHHHT---TCEEEEECCC
T ss_pred CHHHHHHHHHHhcCCCEEEECCCCC----CcccceeeccHHHHHHHhC---CCCEEEEeCC
Confidence 4568899999999999999997632 1211112223456666664 4799888643
No 77
>1kcf_A Hypothetical 30.2 KD protein C25G10.02 in chromosome I; beta-alpha-beta motif, RUVC resolvase family, hydrolase; 2.30A {Schizosaccharomyces pombe} SCOP: a.140.2.1 c.55.3.7
Probab=43.63 E-value=14 Score=31.10 Aligned_cols=19 Identities=26% Similarity=0.532 Sum_probs=17.8
Q ss_pred ceEEEEecCCceEEEEeec
Q 030386 63 GFSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD 81 (178)
.+||+||+|.|....|.-+
T Consensus 40 ~sIlSID~GikNlAyc~l~ 58 (258)
T 1kcf_A 40 SRVLGIDLGIKNFSYCFAS 58 (258)
T ss_dssp SSEEEEEECSTTEEEEEEE
T ss_pred CcEEEEecCCCceEEEEEc
Confidence 4999999999999999988
No 78
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=43.44 E-value=30 Score=26.19 Aligned_cols=60 Identities=8% Similarity=0.030 Sum_probs=37.8
Q ss_pred HHHHHHHHHHcCCCEEEEeecCCC-CCCC------CHHHHHHHHHHHHHHHHhccCCCcEEEEcCCC
Q 030386 99 ELQLLEIAQREETDEFIIGLPKSW-DGSE------TPQSNKVRSVAGRLAVRAAERSFSDILITAIF 158 (178)
Q Consensus 99 ~~~L~~iI~e~~v~~IVVGLPl~m-dG~e------~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERl 158 (178)
++.+.+++++++++.+||=-|-.. +... ++..+.++++...|.+..++.|..|+++..-.
T Consensus 108 ~~~~~~~~~~~~~~lliiD~~~~~~~~~~~~~~~~~~r~~~~~~~~~~l~~~~~~~~~tvi~~~h~~ 174 (243)
T 1n0w_A 108 LYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVV 174 (243)
T ss_dssp HHHHHHHHHHSCEEEEEEETSSGGGC-------CHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC---
T ss_pred HHHHHHHHhcCCceEEEEeCchHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeeee
Confidence 456778888899999999777543 2211 23334477777777766544578898887644
No 79
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=42.81 E-value=42 Score=29.64 Aligned_cols=19 Identities=21% Similarity=0.351 Sum_probs=17.3
Q ss_pred ceEEEEecCCceEEEEeec
Q 030386 63 GFSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD 81 (178)
+.+||||+|+..+=+++-|
T Consensus 6 ~~~lgIDiGtts~k~~l~d 24 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFN 24 (501)
T ss_dssp CEEEEEEECSSEEEEEEEC
T ss_pred cEEEEEEeCccceEEEEEc
Confidence 5799999999999999888
No 80
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=42.46 E-value=42 Score=29.30 Aligned_cols=57 Identities=5% Similarity=-0.053 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHH-cCCCEEEEee----cCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 97 KLELQLLEIAQR-EETDEFIIGL----PKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 97 ~~~~~L~~iI~e-~~v~~IVVGL----Pl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
-+.+.|.+.+++ .++..|++.- |-++.|... .++++++..++. + .|+ +.++||-+.+
T Consensus 162 ~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~----dl~~i~~la~~~-~-~g~-~livD~a~~~ 223 (427)
T 3i16_A 162 PNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIE----DIKSIVDCVKNI-R-KDI-ICFVDNCYGE 223 (427)
T ss_dssp CCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHH----HHHHHHHHHHHH-C-TTS-EEEEECTTTT
T ss_pred cCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHH----HHHHHHHHHHHh-C-CCC-EEEEECCCcc
Confidence 356888888875 5788999988 999998853 445554444431 0 133 5669998764
No 81
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=42.32 E-value=81 Score=25.51 Aligned_cols=56 Identities=14% Similarity=0.126 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.+++ ++..|++-.|-++.|..-+. +.+++.++..++. |+ ...+||-++.
T Consensus 168 d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~-~~l~~i~~~~~~~----~~-~li~Dea~~~ 223 (407)
T 3nra_A 168 DLTGLEEAFKA-GARVFLFSNPNNPAGVVYSA-EEIGQIAALAARY----GA-TVIADQLYSR 223 (407)
T ss_dssp CHHHHHHHHHT-TCCEEEEESSCTTTCCCCCH-HHHHHHHHHHHHH----TC-EEEEECTTTT
T ss_pred CHHHHHHHHhh-CCcEEEEcCCCCCCCcccCH-HHHHHHHHHHHHc----CC-EEEEEccccc
Confidence 56788888876 78899999998888876653 3455555544433 32 6778999874
No 82
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=42.04 E-value=35 Score=27.48 Aligned_cols=57 Identities=14% Similarity=0.050 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
-+.+.|.+.+++.++..|++-.|-+..|..-+. +.+++.++..++. |+ ...+||-++
T Consensus 147 ~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~-~~l~~i~~~~~~~----~~-~li~De~~~ 203 (391)
T 3dzz_A 147 VNWADLEEKLATPSVRMMVFCNPHNPIGYAWSE-EEVKRIAELCAKH----QV-LLISDEIHG 203 (391)
T ss_dssp CCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCH-HHHHHHHHHHHHT----TC-EEEEECTTT
T ss_pred ecHHHHHHHHhccCceEEEEECCCCCCCcccCH-HHHHHHHHHHHHC----CC-EEEEecccc
Confidence 357888888887789999999998888875432 3355555444432 33 677899987
No 83
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=41.89 E-value=40 Score=29.96 Aligned_cols=19 Identities=26% Similarity=0.394 Sum_probs=17.1
Q ss_pred ceEEEEecCCceEEEEeec
Q 030386 63 GFSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD 81 (178)
+.+||||+|+..+=+++-|
T Consensus 7 ~~~lgIDiGtts~k~~l~d 25 (508)
T 3ifr_A 7 RQVIGLDIGTTSTIAILVR 25 (508)
T ss_dssp CEEEEEEECSSEEEEEEEE
T ss_pred CEEEEEEecCcceEEEEEC
Confidence 5799999999999888888
No 84
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=41.76 E-value=22 Score=24.66 Aligned_cols=23 Identities=22% Similarity=0.211 Sum_probs=20.7
Q ss_pred hHHHHHHHHHHHcCCCEEEEeec
Q 030386 97 KLELQLLEIAQREETDEFIIGLP 119 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLP 119 (178)
...+.|.+.++++++|.||+|-.
T Consensus 93 ~~~~~I~~~a~~~~~dliV~G~~ 115 (143)
T 3fdx_A 93 SPKDKILALAKSLPADLVIIASH 115 (143)
T ss_dssp CHHHHHHHHHHHTTCSEEEEESS
T ss_pred ChHHHHHHHHHHhCCCEEEEeCC
Confidence 45688999999999999999987
No 85
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=41.42 E-value=63 Score=23.39 Aligned_cols=56 Identities=11% Similarity=0.091 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCC---HHHHHHHHHHHHHHHHhccCCCcEEEEc
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSET---PQSNKVRSVAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~---~~a~~Vr~Fa~~L~~~~~~~glpV~lvD 155 (178)
.+..+.+.+++.++..++++.|-..+.... .....+.+|-+.+++..++. .+.++|
T Consensus 102 ~~~~~i~~~~~~~~~vil~~~~p~~~~~~~~~~~~~~~~~~~n~~l~~~a~~~--~v~~iD 160 (204)
T 3p94_A 102 NLVSMAELAKANHIKVIFCSVLPAYDFPWRPGMQPADKVIQLNKWIKEYADKN--GLTYVD 160 (204)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCCCSCBTTBTTCCCHHHHHHHHHHHHHHHHHT--TCEEEC
T ss_pred HHHHHHHHHHhCCCeEEEEeCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHc--CCcEEc
Confidence 345566666667888888887543221111 23445666666666555433 466666
No 86
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=41.37 E-value=17 Score=29.07 Aligned_cols=19 Identities=21% Similarity=0.478 Sum_probs=16.8
Q ss_pred ceEEEEecCCceEEEEeec
Q 030386 63 GFSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD 81 (178)
|.+||||+|+..+=+|+-|
T Consensus 1 M~~lGID~GsT~tk~av~d 19 (276)
T 4ehu_A 1 MYTMGLDIGSTASKGVILK 19 (276)
T ss_dssp CEEEEEEECSSCEEEEEEE
T ss_pred CeEEEEEcCccEEEEEEEE
Confidence 4689999999999999887
No 87
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=41.32 E-value=62 Score=28.45 Aligned_cols=60 Identities=10% Similarity=0.127 Sum_probs=42.0
Q ss_pred hHHHHHHHHHHHcCCC--EEEEeecCCCCCCC--CHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETD--EFIIGLPKSWDGSE--TPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~--~IVVGLPl~mdG~e--~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
.....+.+++++++++ .|||=+=-.|.+.. ....+.+.++.+.|+...++.|++|++.-+
T Consensus 295 ~i~~~ir~l~~~~~~~~~lIVID~Lq~~~~~~~~~~r~~~i~~i~~~Lk~lAke~~v~vi~lsq 358 (444)
T 3bgw_A 295 YIWSKTRQTKRKNPGKRVIVMIDYLQLLEPAKANDSRTNQISQISRDLKKMARELDVVVIALSQ 358 (444)
T ss_dssp HHHHHHHHHHHHSCSSCEEEEEECSTTSBCSCSSSCHHHHHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCeEEEEecHHhccCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEEec
Confidence 4556788888899999 99986554444322 234567777877777666556899999755
No 88
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=41.25 E-value=69 Score=25.60 Aligned_cols=56 Identities=9% Similarity=-0.027 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.+ ..++..|++-.|-+..|..-+.. .+++.++..++. | -...+||-++-
T Consensus 145 d~~~l~~~l-~~~~~~v~i~~p~nptG~~~~~~-~l~~l~~~~~~~----~-~~li~De~~~~ 200 (383)
T 3kax_A 145 DFEHLEKQF-QQGVKLMLLCSPHNPIGRVWKKE-ELTKLGSLCTKY----N-VIVVADEIHSD 200 (383)
T ss_dssp CHHHHHHHH-TTTCCEEEEESSBTTTTBCCCHH-HHHHHHHHHHHH----T-CEEEEECTTTT
T ss_pred cHHHHHHHh-CcCCeEEEEeCCCCCCCcCcCHH-HHHHHHHHHHHC----C-CEEEEEccccc
Confidence 567888887 67899999999988888766533 355555544433 3 26678998863
No 89
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=41.20 E-value=22 Score=23.89 Aligned_cols=18 Identities=22% Similarity=0.226 Sum_probs=14.7
Q ss_pred ceEEEEecCCceEEEEee
Q 030386 63 GFSLGVDLGLSRTGLALS 80 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiS 80 (178)
....-+|+|.+|||+|-.
T Consensus 69 ~~y~vfD~~~~riGfA~~ 86 (87)
T 1b5f_B 69 PYHTVFDYGNLLVGFAEA 86 (87)
T ss_dssp TEEEEEETTTTEEEEEEE
T ss_pred cEEEEEECCCCEEEEEEc
Confidence 346679999999999954
No 90
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=40.96 E-value=23 Score=24.59 Aligned_cols=24 Identities=21% Similarity=0.296 Sum_probs=20.9
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPK 120 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl 120 (178)
...+.|.+.++++++|.||+|-.-
T Consensus 86 ~~~~~I~~~a~~~~~dliV~G~~~ 109 (137)
T 2z08_A 86 VPAEAILQAARAEKADLIVMGTRG 109 (137)
T ss_dssp SHHHHHHHHHHHTTCSEEEEESSC
T ss_pred CHHHHHHHHHHHcCCCEEEECCCC
Confidence 456889999999999999999874
No 91
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=40.47 E-value=61 Score=26.94 Aligned_cols=57 Identities=14% Similarity=0.146 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHc-----CCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQRE-----ETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e~-----~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.++++ ++..|++-.|-+..|..-+.. ..++.++..++. | -...+||-++.
T Consensus 174 d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~-~l~~l~~~~~~~----~-~~li~Dea~~~ 235 (435)
T 3piu_A 174 TETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRN-ELYLLLSFVEDK----G-IHLISDEIYSG 235 (435)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHH-HHHHHHHHHHHH----T-CEEEEECTTGG
T ss_pred CHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHH-HHHHHHHHHHHc----C-CEEEEeccccc
Confidence 567888888773 678899999998888765543 355555544433 2 26789999764
No 92
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=40.45 E-value=83 Score=27.42 Aligned_cols=20 Identities=30% Similarity=0.325 Sum_probs=17.5
Q ss_pred CceEEEEecCCceEEEEeec
Q 030386 62 GGFSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 62 ~~rILgLD~G~KRIGVAiSD 81 (178)
...+||||+|+..+=+++-|
T Consensus 3 ~~~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEE
T ss_pred cceEEEEEecCCCceEEEEE
Confidence 35699999999999988887
No 93
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=40.02 E-value=56 Score=27.12 Aligned_cols=56 Identities=11% Similarity=0.028 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
+++.|.+.+++.++..|++-.|-+..|..-+. +.+++.++..++. |+ ...+||-++
T Consensus 182 d~~~le~~i~~~~~~~vil~~p~nptG~~~~~-~~l~~l~~l~~~~----~~-~li~De~~~ 237 (421)
T 3l8a_A 182 DFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDN-DDLIKIAELCKKH----GV-ILVSDEIHQ 237 (421)
T ss_dssp CHHHHHHHHHHTTEEEEEEESSBTTTTBCCCH-HHHHHHHHHHHHH----TC-EEEEECTTT
T ss_pred CHHHHHHHhhccCCeEEEECCCCCCCCCcCCH-HHHHHHHHHHHHc----CC-EEEEEcccc
Confidence 67889998887889999998898888854332 3355655555443 32 667899976
No 94
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=39.78 E-value=33 Score=28.74 Aligned_cols=54 Identities=17% Similarity=0.076 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHc---CCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQRE---ETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e~---~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.+++. ++..|++--|.++.|..-+ -+.+.+++ +++ |+ +..+||-++.
T Consensus 179 d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~-l~~l~~l~----~~~---g~-~li~Dea~~~ 235 (427)
T 2w8t_A 179 SVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAP-LKEMVAVA----KKH---GA-MVLVDEAHSM 235 (427)
T ss_dssp CHHHHHHHHHTSCSSSCEEEEEESEETTTTEECC-HHHHHHHH----HHT---TC-EEEEECTTTT
T ss_pred CHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC-HHHHHHHH----HHc---CC-EEEEECCccc
Confidence 567788888775 6789999999999998766 23333332 233 33 6788999875
No 95
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=39.65 E-value=52 Score=28.74 Aligned_cols=57 Identities=4% Similarity=-0.081 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHH-cCCCEEEEee----cCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 97 KLELQLLEIAQR-EETDEFIIGL----PKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 97 ~~~~~L~~iI~e-~~v~~IVVGL----Pl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
-+.+.|.+.+++ .++..|++.- |-++.|... .++++++..++. + .|+ +.++||-+.+
T Consensus 162 ~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~----dl~~i~~ia~~~-~-~g~-~livD~a~~~ 223 (427)
T 3hvy_A 162 VDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIA----EIAEIIKSIREV-N-ENV-IVFVDNCYGE 223 (427)
T ss_dssp CCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHH----HHHHHHHHHHHH-C-SSS-EEEEECTTCT
T ss_pred cCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHH----HHHHHHHHHHHh-C-CCC-EEEEECCccc
Confidence 466888888886 6789999999 999988753 445554444431 0 133 6779998754
No 96
>2vtf_A Endo-beta-N-acetylglucosaminidase; hydrolase, family 85, glycosidase, carbohydrat binding; HET: B3P PGE; 1.79A {Arthrobacter protophormiae} PDB: 3fhq_A* 3fha_A*
Probab=39.49 E-value=85 Score=29.52 Aligned_cols=57 Identities=18% Similarity=0.225 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
..+++|.++++.++.|++.|=.=.+ +-..+.++..+.|.+.|++..++ +..|+++|=
T Consensus 156 ~~a~kLv~~a~~yGFDGw~IN~E~~--~~~~~~~~~l~~F~~~L~~~~~~-~~~v~WYDs 212 (626)
T 2vtf_A 156 PLADKLLEVADYYGFDGWFINQQTE--GADEGTAEAMQAFLVYLQEQKPE-GMHIMWYDS 212 (626)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECCT--TCCHHHHHHHHHHHHHHHHHSCT-TCEEEEESC
T ss_pred HHHHHHHHHHHHhCCCceEEeeccc--cCCHHHHHHHHHHHHHHHHhCCC-CcEEEEeec
Confidence 4678999999999999988865432 33456789999999999988754 577999985
No 97
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=39.48 E-value=24 Score=25.15 Aligned_cols=54 Identities=15% Similarity=0.172 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAI 157 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDER 157 (178)
...+.|.+.++++++|.||+|-.-. .+-.. ...-..++++-... .+||..+-..
T Consensus 107 ~~~~~I~~~a~~~~~dlIV~G~~g~-~~~~~---~~~GSv~~~vl~~~---~~pVlvv~~~ 160 (162)
T 1mjh_A 107 IPHEEIVKIAEDEGVDIIIMGSHGK-TNLKE---ILLGSVTENVIKKS---NKPVLVVKRK 160 (162)
T ss_dssp CHHHHHHHHHHHTTCSEEEEESCCS-SCCTT---CSSCHHHHHHHHHC---CSCEEEECCC
T ss_pred CHHHHHHHHHHHcCCCEEEEcCCCC-CCccc---eEecchHHHHHHhC---CCCEEEEeCC
Confidence 4567899999999999999998743 11100 00112344444443 4788887543
No 98
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=38.74 E-value=39 Score=27.49 Aligned_cols=57 Identities=11% Similarity=0.057 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.+++.++..|++-.|-+..|..-+. +.+++.++..++. |+ .+.+||-++-
T Consensus 150 d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~-~~l~~l~~~~~~~----~~-~li~De~~~~ 206 (390)
T 1d2f_A 150 DMGKLEAVLAKPECKIMLLCSPQNPTGKVWTC-DELEIMADLCERH----GV-RVISDEIHMD 206 (390)
T ss_dssp CHHHHHHHHTSTTEEEEEEESSCTTTCCCCCT-THHHHHHHHHHHT----TC-EEEEECTTTT
T ss_pred CHHHHHHHhccCCCeEEEEeCCCCCCCcCcCH-HHHHHHHHHHHHc----CC-EEEEEccccc
Confidence 56788888876678888888998888876543 3445544444332 33 5678999874
No 99
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=38.45 E-value=26 Score=24.54 Aligned_cols=51 Identities=18% Similarity=0.231 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEc
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvD 155 (178)
...+.|.+.++++++|.||+|-.-. .+ -. ...-..++++-... .+||..+-
T Consensus 96 ~~~~~I~~~a~~~~~dliV~G~~~~-~~---~~-~~~Gs~~~~vl~~~---~~pVlvv~ 146 (150)
T 3tnj_A 96 EPREEIIRIAEQENVDLIVVGSHGR-HG---LA-LLLGSTANSVLHYA---KCDVLAVR 146 (150)
T ss_dssp CHHHHHHHHHHHTTCSEEEEEEC-------------CCCHHHHHHHHC---SSEEEEEE
T ss_pred CHHHHHHHHHHHcCCCEEEEecCCC-CC---cC-eEecchHHHHHHhC---CCCEEEEe
Confidence 3558899999999999999997632 11 11 11223355555554 46887764
No 100
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=37.65 E-value=41 Score=23.72 Aligned_cols=45 Identities=13% Similarity=0.197 Sum_probs=30.8
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEc
Q 030386 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 100 ~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvD 155 (178)
+.+.+++++++++.++|..|.. . .+..++.++.+.+ .|++|..+-
T Consensus 55 ~~l~~~~~~~~id~viia~~~~---~----~~~~~~i~~~l~~----~gv~v~~vP 99 (141)
T 3nkl_A 55 KYLERLIKKHCISTVLLAVPSA---S----QVQKKVIIESLAK----LHVEVLTIP 99 (141)
T ss_dssp GGHHHHHHHHTCCEEEECCTTS---C----HHHHHHHHHHHHT----TTCEEEECC
T ss_pred HHHHHHHHHCCCCEEEEeCCCC---C----HHHHHHHHHHHHH----cCCeEEECC
Confidence 4578888999999999999843 1 2345556666653 367777653
No 101
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=37.48 E-value=62 Score=28.22 Aligned_cols=60 Identities=10% Similarity=0.080 Sum_probs=38.0
Q ss_pred CceEEEEecCCceEEEEeec----CC--cc---cccEEEEcc---C-hhHHHHHHHHHHH------cCCCE-EEEeecCC
Q 030386 62 GGFSLGVDLGLSRTGLALSK----GF--CV---RPLTVLKLR---G-EKLELQLLEIAQR------EETDE-FIIGLPKS 121 (178)
Q Consensus 62 ~~rILgLD~G~KRIGVAiSD----~~--~A---~Pl~tI~~~---~-~~~~~~L~~iI~e------~~v~~-IVVGLPl~ 121 (178)
...++|||+|+..|=+.+.+ +. .+ .|-..+... + +.....|++.+++ .+++. +++|.|=+
T Consensus 7 ~~~ivglDIGts~I~~vv~~~~~~~~~i~g~~~~~s~gv~~G~I~di~~~~~~I~~av~~ae~~~g~~i~~~v~v~i~g~ 86 (419)
T 4a2a_A 7 TVFYTSIDIGSRYIKGLVLGKRDQEWEALAFSSVKSRGLDEGEIKDAIAFKESVNTLLKELEEQLQKSLRSDFVISFSSV 86 (419)
T ss_dssp CCEEEEEEECSSEEEEEEEEC----CEEEEEEEEECCSEETTEESBHHHHHHHHHHHHHHHHHHHTSCCCSEEEEEECCT
T ss_pred CCEEEEEEccCCEEEEEEEEEcCCCCEEEEEEEeccCCeeCCEEEcHHHHHHHHHHHHHHHHHHcCCCcCceEEEEEcCC
Confidence 35789999999999777765 11 11 222222211 1 2345677777775 47888 99999976
No 102
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=37.23 E-value=26 Score=24.28 Aligned_cols=24 Identities=21% Similarity=0.386 Sum_probs=20.8
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPK 120 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl 120 (178)
...+.|.+.++++++|.||+|-.-
T Consensus 97 ~~~~~I~~~a~~~~~dliV~G~~~ 120 (147)
T 3hgm_A 97 RPSRTIVRFARKRECDLVVIGAQG 120 (147)
T ss_dssp CHHHHHHHHHHHTTCSEEEECSSC
T ss_pred CHHHHHHHHHHHhCCCEEEEeCCC
Confidence 456789999999999999999874
No 103
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=37.11 E-value=27 Score=25.14 Aligned_cols=55 Identities=11% Similarity=0.048 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIF 158 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERl 158 (178)
...+.|.+.++++++|.||+|-.-. ++-. ....-..++++-... .+||..+-..-
T Consensus 104 ~~~~~I~~~a~~~~~DlIV~G~~g~-~~~~---~~~~Gsv~~~vl~~~---~~PVlvv~~~~ 158 (170)
T 2dum_A 104 IPWDEIVKVAEEENVSLIILPSRGK-LSLS---HEFLGSTVMRVLRKT---KKPVLIIKEVD 158 (170)
T ss_dssp CHHHHHHHHHHHTTCSEEEEESCCC-CC-----TTCCCHHHHHHHHHC---SSCEEEECCCC
T ss_pred ChHHHHHHHHHHcCCCEEEECCCCC-Cccc---cceechHHHHHHHhC---CCCEEEEccCC
Confidence 4567899999999999999998743 1110 001123445555554 47998886543
No 104
>3guv_A Site-specific recombinase, resolvase family prote; structural genomics, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae}
Probab=36.69 E-value=78 Score=23.45 Aligned_cols=59 Identities=8% Similarity=-0.066 Sum_probs=39.6
Q ss_pred hHHHHHHHHHHHcC--CCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCchhhh
Q 030386 97 KLELQLLEIAQREE--TDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSFSCH 163 (178)
Q Consensus 97 ~~~~~L~~iI~e~~--v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlSTs~~ 163 (178)
..+.++.+.+++.+ +|.|||=-.-.+.-. ...+..+.+.|.+ .|+.|+.++|.+.|++-
T Consensus 60 p~l~~ll~~~~~g~~~~d~lvv~~ldRl~R~----~~~~~~~~~~l~~----~gv~l~~~~~~~d~~~~ 120 (167)
T 3guv_A 60 IQFNRMMEDIKSGKDGVSFVLVFKLSRFARN----AADVLSTLQIMQD----YGVNLICVEDGIDSSKD 120 (167)
T ss_dssp HHHHHHHHHHHTCTTCCSEEEESCGGGTCSS----HHHHHHHHHHHHH----TTCEEEETTTTEEGGGC
T ss_pred HHHHHHHHHHHcCCCCccEEEEEeCchhcCC----HHHHHHHHHHHHH----CCCEEEEeeCCcCCCCH
Confidence 35577777777777 999999655443333 4455555555653 48999999999865443
No 105
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=36.64 E-value=56 Score=24.63 Aligned_cols=60 Identities=10% Similarity=0.075 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
...+.+.+++++.+++.+||=.|-.+.+... ...+++...|.+..++.|++|+++.+...
T Consensus 115 ~~~~~i~~~~~~~~~~~vviD~~~~l~~~~~---~~~~~~l~~l~~~~~~~~~~vi~~~h~~~ 174 (247)
T 2dr3_A 115 EFIEVLRQAIRDINAKRVVVDSVTTLYINKP---AMARSIILQLKRVLAGTGCTSIFVSQVSV 174 (247)
T ss_dssp HHHHHHHHHHHHHTCCEEEEETSGGGTTTCG---GGHHHHHHHHHHHHHHTTCEEEEEEECC-
T ss_pred HHHHHHHHHHHHhCCCEEEECCchHhhcCCH---HHHHHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 4567888889999999999988876653211 12334444444444345788998866543
No 106
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=36.28 E-value=69 Score=26.12 Aligned_cols=57 Identities=16% Similarity=0.095 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHcCCCEE-EEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQREETDEF-IIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~I-VVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.+++.++..| |+-.|-+..|..-+. +..++.++..++. |+ .+.+||-++.
T Consensus 150 d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~-~~l~~l~~~~~~~----~~-~li~De~~~~ 207 (397)
T 2zyj_A 150 DLDALEEVLKRERPRFLYLIPSFQNPTGGLTPL-PARKRLLQMVMER----GL-VVVEDDAYRE 207 (397)
T ss_dssp CHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCH-HHHHHHHHHHHHH----TC-CEEEECTTTT
T ss_pred CHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCH-HHHHHHHHHHHHc----CC-EEEEeCCccc
Confidence 56788888887778887 578898888876543 3455555544433 33 5678999875
No 107
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=35.97 E-value=1.1e+02 Score=22.09 Aligned_cols=19 Identities=11% Similarity=0.335 Sum_probs=10.4
Q ss_pred HHHHHHHHHcCCCEEEEee
Q 030386 100 LQLLEIAQREETDEFIIGL 118 (178)
Q Consensus 100 ~~L~~iI~e~~v~~IVVGL 118 (178)
..+.+.+++.++..++++.
T Consensus 89 ~~li~~~~~~~~~vil~~~ 107 (190)
T 1ivn_A 89 RQILQDVKAANAEPLLMQI 107 (190)
T ss_dssp HHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHcCCCEEEEec
Confidence 3444445555566666664
No 108
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=35.96 E-value=51 Score=29.25 Aligned_cols=19 Identities=26% Similarity=0.450 Sum_probs=16.9
Q ss_pred ceEEEEecCCceEEEEeec
Q 030386 63 GFSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD 81 (178)
+.+||||+|+..+=.++-|
T Consensus 4 ~~~lgIDiGtts~K~~l~d 22 (504)
T 3ll3_A 4 KYIIGMDVGTTATKGVLYD 22 (504)
T ss_dssp EEEEEEEECSSEEEEEEEE
T ss_pred CEEEEEEecCCceEEEEEc
Confidence 4799999999999888888
No 109
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=35.68 E-value=44 Score=27.19 Aligned_cols=57 Identities=7% Similarity=0.059 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.+++.++..|++-.|-+..|..-+. +.+++.++..++. |+ ...+||-++-
T Consensus 152 d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~-~~l~~i~~~~~~~----~~-~li~De~~~~ 208 (399)
T 1c7n_A 152 DFQKLEKLSKDKNNKALLFCSPHNPVGRVWKK-DELQKIKDIVLKS----DL-MLWSDEIHFD 208 (399)
T ss_dssp CHHHHHHHHTCTTEEEEEEESSBTTTTBCCCH-HHHHHHHHHHHHS----SC-EEEEECTTTT
T ss_pred cHHHHHHHhccCCCcEEEEcCCCCCCCcCcCH-HHHHHHHHHHHHc----CC-EEEEEccccc
Confidence 56788888876678888888888888876542 3555555544432 33 6778999874
No 110
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=35.55 E-value=19 Score=33.73 Aligned_cols=18 Identities=33% Similarity=0.599 Sum_probs=16.0
Q ss_pred eEEEEecCCceEEEEeec
Q 030386 64 FSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 64 rILgLD~G~KRIGVAiSD 81 (178)
.++|||+|+....||+.+
T Consensus 3 ~~iGIDlGTtns~va~~~ 20 (675)
T 3d2f_A 3 TPFGLDLGNNNSVLAVAR 20 (675)
T ss_dssp CCEEEECCSSEEEEEEEE
T ss_pred cEEEEEcCCCcEEEEEEE
Confidence 489999999999999865
No 111
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=35.38 E-value=71 Score=26.30 Aligned_cols=60 Identities=10% Similarity=0.126 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHcCCC--EEEEeecCCCCC--CCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETD--EFIIGLPKSWDG--SETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~--~IVVGLPl~mdG--~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
.....+.+++++++++ .|||=.=-.+.. ......+.+.++.+.|+...++.|++|++.-+
T Consensus 166 ~i~~~i~~l~~~~~~~~~lVVID~l~~l~~~~~~~~r~~~i~~~~~~Lk~lAk~~~i~vi~lsq 229 (315)
T 3bh0_A 166 YIWSKTRQTKRKNPGKRVIVMIDYLQLLEPAKANDSRTNQISQISRDLKKMARELDVVVIALSQ 229 (315)
T ss_dssp HHHHHHHHHHHTSSSCCEEEEEECGGGSBCSCTTSCHHHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHHhcCCCCeEEEEeCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEEee
Confidence 4556778888888999 888854322322 21234467777777777666556899999865
No 112
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=35.31 E-value=63 Score=25.28 Aligned_cols=53 Identities=9% Similarity=0.072 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
+.+.|.+.++++++..|++-.|-+..|..-+. +.+.++ .+ ++ |+ ...+||-++
T Consensus 112 d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~-~~i~~l---~~-~~---~~-~li~D~a~~ 164 (353)
T 2yrr_A 112 DPEAVARALKRRRYRMVALVHGETSTGVLNPA-EAIGAL---AK-EA---GA-LFFLDAVTT 164 (353)
T ss_dssp CHHHHHHHHHHSCCSEEEEESEETTTTEECCH-HHHHHH---HH-HH---TC-EEEEECTTT
T ss_pred CHHHHHHHHHhCCCCEEEEEccCCCcceecCH-HHHHHH---HH-Hc---CC-eEEEEcCcc
Confidence 56788888877678999999999888976653 233333 22 32 33 677899985
No 113
>2hl0_A Threonyl-tRNA synthetase; translation, editing, aminoacyl-tRNA synthetase, enzyme mechanism, enantioselectivity, ligase; HET: A3S; 1.86A {Pyrococcus abyssi} PDB: 2hkz_A 1y2q_A* 2hl2_A* 3pd2_A* 2hl1_A* 3pd3_A* 3pd4_A* 3pd5_A*
Probab=34.83 E-value=77 Score=24.66 Aligned_cols=55 Identities=13% Similarity=0.161 Sum_probs=35.4
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecC-CCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEE
Q 030386 97 KLELQLLEIAQREETDEFIIGLPK-SWDGSETPQSNKVRSVAGRLAVRAAERSFSDIL 153 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl-~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~l 153 (178)
+..+.|.++..+.+++.||+ +|+ |++.+.+. -..+.+-.+.++++++.+|++|+.
T Consensus 59 ~av~eI~~~a~kv~~~~ivl-YPyAHLSs~La~-P~~A~~iL~~le~~L~~~g~eV~r 114 (143)
T 2hl0_A 59 KAIEEISKVAEQVKAENVFV-YPFAHLSSELAK-PSVAMDILNRVYQGLKERGFNVGK 114 (143)
T ss_dssp HHHHHHHHHHHHHTCCEEEE-EECGGGCSSBCC-HHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEE-eccccccCccCC-hHHHHHHHHHHHHHHHhCCCeEEE
Confidence 45678999999999999988 897 45544332 233344445555555555666653
No 114
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=34.68 E-value=31 Score=24.97 Aligned_cols=24 Identities=17% Similarity=0.345 Sum_probs=20.9
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPK 120 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl 120 (178)
...+.|.+.++++++|.||+|-.-
T Consensus 104 ~~~~~I~~~a~~~~~DLIV~G~~g 127 (155)
T 3dlo_A 104 EPPDDIVDFADEVDAIAIVIGIRK 127 (155)
T ss_dssp CHHHHHHHHHHHTTCSEEEEECCE
T ss_pred CHHHHHHHHHHHcCCCEEEECCCC
Confidence 456899999999999999999763
No 115
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=34.25 E-value=1.5e+02 Score=24.41 Aligned_cols=53 Identities=11% Similarity=0.029 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+..++.++|++++--|.--.. + .+.+.+|-+.+++.. ++||+++|=
T Consensus 84 ~~ai~la~~a~~~Gadavlv~~P~y~~~--~--~~~l~~~f~~ia~a~---~lPiilYn~ 136 (292)
T 3daq_A 84 EKSIQASIQAKALGADAIMLITPYYNKT--N--QRGLVKHFEAIADAV---KLPVVLYNV 136 (292)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCCSSCC--C--HHHHHHHHHHHHHHH---CSCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCCC--C--HHHHHHHHHHHHHhC---CCCEEEEec
Confidence 3455778888999999999999975332 2 356666778888876 589999984
No 116
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=34.02 E-value=67 Score=26.59 Aligned_cols=57 Identities=12% Similarity=0.184 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHc-----CCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQRE-----ETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e~-----~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.++++ ++..|++-.|-+..|..-+. +.+++.++..++ .|+ +..+||-++-
T Consensus 171 d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~-~~l~~l~~~~~~----~~~-~li~Dea~~~ 232 (428)
T 1iay_A 171 TSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDK-DTLKSVLSFTNQ----HNI-HLVCDEIYAA 232 (428)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCH-HHHHHHHHHHHT----TTC-EEEEECTTGG
T ss_pred CHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCH-HHHHHHHHHHHH----CCe-EEEEeccccc
Confidence 467788777763 67788999999888876543 455555554432 233 6778999874
No 117
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=33.74 E-value=37 Score=25.32 Aligned_cols=56 Identities=14% Similarity=0.032 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCC------------CCCHHHHHHHHHHHHHHHHhccCCCcEEEEc
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDG------------SETPQSNKVRSVAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG------------~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvD 155 (178)
.+..+.+.+++.++..+|++.|--... ......+.+++|.+.+++..++. .|.++|
T Consensus 101 ~l~~~i~~~~~~~~~vil~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~a~~~--~v~~vD 168 (240)
T 3mil_A 101 NIRQMVSLMKSYHIRPIIIGPGLVDREKWEKEKSEEIALGYFRTNENFAIYSDALAKLANEE--KVPFVA 168 (240)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCCCCHHHHHHHCHHHHHTTCCCCHHHHHHHHHHHHHHHHHT--TCCEEC
T ss_pred HHHHHHHHHHHcCCeEEEEcCCCCCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHh--CCeEEe
Confidence 455666677777888888887643211 12233456667766666665443 455666
No 118
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=33.55 E-value=87 Score=27.49 Aligned_cols=56 Identities=21% Similarity=0.147 Sum_probs=34.2
Q ss_pred eEEEEecCCceEEEEeec--C-Ccc---cccEEEE-------ccChhHHH----HHHHHHHH-----cCCCEEEEeec
Q 030386 64 FSLGVDLGLSRTGLALSK--G-FCV---RPLTVLK-------LRGEKLEL----QLLEIAQR-----EETDEFIIGLP 119 (178)
Q Consensus 64 rILgLD~G~KRIGVAiSD--~-~~A---~Pl~tI~-------~~~~~~~~----~L~~iI~e-----~~v~~IVVGLP 119 (178)
.++|||+|+-.+=+++-| + +.+ .|..... .+....++ .+++++++ .+|..|=|+-|
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~i~~Igis~~ 80 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLEGRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAGAEAGEVLALGITNQ 80 (495)
T ss_dssp CEEEEEECSSEEEEEEECTTSCEEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEEC
T ss_pred EEEEEeeCCcceEEEEECCCCCEEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEeCC
Confidence 589999999999999988 2 222 3443321 11123344 44444444 45888888776
No 119
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=33.43 E-value=88 Score=27.81 Aligned_cols=56 Identities=25% Similarity=0.369 Sum_probs=34.1
Q ss_pred ceEEEEecCCceEEEEeec--C-Cc---ccccEEEEccC------hhHHHHHHHHHHH---cCCCEEEEee
Q 030386 63 GFSLGVDLGLSRTGLALSK--G-FC---VRPLTVLKLRG------EKLELQLLEIAQR---EETDEFIIGL 118 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD--~-~~---A~Pl~tI~~~~------~~~~~~L~~iI~e---~~v~~IVVGL 118 (178)
+.++|||+|+..+=+++-| + +. ..|....+..+ ...++.+.+.+++ .+|..|-|+-
T Consensus 6 ~~~lgIDiGTts~Ka~l~d~~G~i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~~~~I~aIgis~ 76 (482)
T 3h6e_A 6 GATIVIDLGKTLSKVSLWDLDGRMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYADHPVTTIVPVG 76 (482)
T ss_dssp --CEEEEECSSEEEEEEECTTSCEEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTTTSCCCEEEEEE
T ss_pred ceEEEEEcCCCCeEEEEEECCCcEEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHHhcCCCEEEEec
Confidence 4689999999999888888 2 22 24444333221 2356666666655 5677776654
No 120
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=33.41 E-value=87 Score=25.66 Aligned_cols=60 Identities=12% Similarity=0.107 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHc---CCC-EEEEeec-CCCCCCCCHHHHHHHHHHHHHHHHhc--cCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQRE---ETD-EFIIGLP-KSWDGSETPQSNKVRSVAGRLAVRAA--ERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e~---~v~-~IVVGLP-l~mdG~e~~~a~~Vr~Fa~~L~~~~~--~~glpV~lvDERlS 159 (178)
+.+.|.+.+++. +.. .+++--| -|+.|..-+..+ +++.++..++..+ +.| -+..+||-|+
T Consensus 162 d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~-l~~l~~~~~~~~~~~~~~-~~li~De~y~ 228 (413)
T 3t18_A 162 NIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEE-WDEVITFLKEKAEDKDKK-ITLIVDVAYL 228 (413)
T ss_dssp CHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHH-HHHHHHHHHHHTTSTTCE-EEEEEECTTG
T ss_pred CHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHHhhccCCc-EEEEEecccc
Confidence 567788877764 666 7888889 789998776544 5555555442110 113 3677899874
No 121
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=32.94 E-value=31 Score=23.97 Aligned_cols=24 Identities=17% Similarity=0.216 Sum_probs=20.1
Q ss_pred hHHHHHHH-HHHHcCCCEEEEeecC
Q 030386 97 KLELQLLE-IAQREETDEFIIGLPK 120 (178)
Q Consensus 97 ~~~~~L~~-iI~e~~v~~IVVGLPl 120 (178)
...+.|.+ .++++++|.||+|-.-
T Consensus 94 ~~~~~I~~~~a~~~~~dliV~G~~~ 118 (146)
T 3s3t_A 94 IPKHTIEDYAKQHPEIDLIVLGATG 118 (146)
T ss_dssp CHHHHHHHHHHHSTTCCEEEEESCC
T ss_pred ChHHHHHHHHHhhcCCCEEEECCCC
Confidence 35578888 8999999999999763
No 122
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=32.90 E-value=25 Score=28.86 Aligned_cols=19 Identities=32% Similarity=0.429 Sum_probs=15.2
Q ss_pred ceEEEEecCCceEEEEeec
Q 030386 63 GFSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD 81 (178)
...+|||+|+..+-+|+.+
T Consensus 3 ~~~igIDlGT~~s~v~~~~ 21 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRG 21 (344)
T ss_dssp -CEEEEEECSSEEEEEETT
T ss_pred CceEEEEcCcCcEEEEECC
Confidence 3689999999999888643
No 123
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=32.83 E-value=95 Score=25.21 Aligned_cols=53 Identities=15% Similarity=0.098 Sum_probs=36.6
Q ss_pred HHHHHHHHHHH---cCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQR---EETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e---~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
+.+.|.+++++ .++..|++--|-++.|..-+. +++.+++ + ++ |+ ...+||-++
T Consensus 163 d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l-~~i~~l~---~-~~---~~-~li~Dea~~ 218 (401)
T 2bwn_A 163 DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPI-KEICDIA---E-EF---GA-LTYIDEVHA 218 (401)
T ss_dssp CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCH-HHHHHHH---H-HH---TC-EEEEECTTT
T ss_pred CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCH-HHHHHHH---H-Hc---CC-EEEEecccc
Confidence 45677888775 357789999999999987772 3333333 2 22 33 677999998
No 124
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=32.64 E-value=1.3e+02 Score=21.31 Aligned_cols=23 Identities=9% Similarity=-0.012 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHcCCCEEEEeecC
Q 030386 98 LELQLLEIAQREETDEFIIGLPK 120 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl 120 (178)
.+..+.+.+++.++..+++|.|.
T Consensus 91 ~~~~~i~~~~~~~~~vvl~~~~~ 113 (185)
T 3hp4_A 91 NLTALVKKSQAANAMTALMEIYI 113 (185)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCC
T ss_pred HHHHHHHHHHHcCCeEEEEeCCC
Confidence 45667777778889999999743
No 125
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=32.54 E-value=1.1e+02 Score=27.39 Aligned_cols=56 Identities=11% Similarity=0.101 Sum_probs=34.5
Q ss_pred ceEEEEecCCceEEEEeec-C---Ccc---cccEE-EEccChhHHHHHHHHHHHc----CCCEEEEee
Q 030386 63 GFSLGVDLGLSRTGLALSK-G---FCV---RPLTV-LKLRGEKLELQLLEIAQRE----ETDEFIIGL 118 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD-~---~~A---~Pl~t-I~~~~~~~~~~L~~iI~e~----~v~~IVVGL 118 (178)
..+||||+|+..+=+++-| . +.+ .|.+- ...+....++.+.+.+++- +|..|-|+-
T Consensus 5 ~~~lgIDiGtts~ka~l~d~~~G~i~~~~~~~~~g~~e~d~~~~~~~i~~~l~~~~~~~~I~~Igis~ 72 (515)
T 3i8b_A 5 TLVAGVDTSTQSCKVRVTDAETGELVRFGQAKHPNGTSVDPSYWWSAFQEAAEQAGGLDDVSALAVGG 72 (515)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCSSSEECTHHHHHHHHHHHHHTTCSTTEEEEEEEE
T ss_pred cEEEEEEeccccEEEEEEECCCCeEEEEEEEeCCCCceECHHHHHHHHHHHHHhcCCccCceEEEEeC
Confidence 4799999999999888887 3 222 23211 1112245678888888774 344554443
No 126
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=32.41 E-value=30 Score=27.98 Aligned_cols=52 Identities=10% Similarity=-0.027 Sum_probs=35.4
Q ss_pred HHHHHHHHHHc-----CCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 99 ELQLLEIAQRE-----ETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 99 ~~~L~~iI~e~-----~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
.+.|.+.++++ ++..|++.-|-+..|..-+ -+++.+++ + +. |+ ...+||-++
T Consensus 159 ~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~-l~~i~~l~---~-~~---~~-~li~De~~~ 215 (399)
T 3tqx_A 159 MGDLEAKLKEADEKGARFKLIATDGVFSMDGIIAD-LKSICDLA---D-KY---NA-LVMVDDSHA 215 (399)
T ss_dssp TTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECC-HHHHHHHH---H-HT---TC-EEEEECTTT
T ss_pred HHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCC-HHHHHHHH---H-Hc---CC-EEEEECCcc
Confidence 45677777764 7889999999999997766 23333332 2 22 33 677899986
No 127
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=32.38 E-value=95 Score=25.19 Aligned_cols=51 Identities=14% Similarity=0.154 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
+.+.|.+.+++.++..|++.-|.+ |...+. +.+.++++ ++ |+ ...+||-.+
T Consensus 160 d~~~l~~~i~~~~~~~v~~~~~~~--~~~~~l-~~i~~l~~----~~---~~-~li~De~~~ 210 (425)
T 3ecd_A 160 DYDQVEALAQQHKPSLIIAGFSAY--PRKLDF-ARFRAIAD----SV---GA-KLMVDMAHI 210 (425)
T ss_dssp CHHHHHHHHHHHCCSEEEEECSCC--CSCCCH-HHHHHHHH----HH---TC-EEEEECGGG
T ss_pred CHHHHHHHHhhcCCcEEEEccccC--CCcCCH-HHHHHHHH----Hc---CC-EEEEECcCh
Confidence 578899999888899999987765 655554 33444332 33 33 667899743
No 128
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=32.08 E-value=1.7e+02 Score=24.13 Aligned_cols=53 Identities=13% Similarity=0.095 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+..++.++|++++--|.--. .+ .+.+.+|-+.+++.. ++||+++|=
T Consensus 89 ~~ai~la~~a~~~Gadavlv~~P~y~~--~~--~~~l~~~f~~va~a~---~lPiilYn~ 141 (297)
T 3flu_A 89 VEAIALSQAAEKAGADYTLSVVPYYNK--PS--QEGIYQHFKTIAEAT---SIPMIIYNV 141 (297)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSSC--CC--HHHHHHHHHHHHHHC---CSCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCC--CC--HHHHHHHHHHHHHhC---CCCEEEEEC
Confidence 345577888999999999999997532 22 355666778888775 589999984
No 129
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=32.01 E-value=79 Score=25.10 Aligned_cols=54 Identities=13% Similarity=0.194 Sum_probs=37.0
Q ss_pred HHHHHHHHHHH----cCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQR----EETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e----~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.+++ .++..|++-.|-+..|..-+. +.+.++++ + .|+ ...+||-++-
T Consensus 131 d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~~-~~i~~~~~----~---~~~-~li~D~a~~~ 188 (371)
T 2e7j_A 131 TPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDV-KKIAKVCS----E---YDV-PLLVNGAYAI 188 (371)
T ss_dssp CHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCH-HHHHHHHH----T---TTC-CEEEECTTTB
T ss_pred CHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCCH-HHHHHHHH----H---cCC-eEEEECcccc
Confidence 56788888876 467789999998999987764 33333332 2 244 5678998865
No 130
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=31.93 E-value=1.4e+02 Score=25.09 Aligned_cols=53 Identities=17% Similarity=0.169 Sum_probs=40.2
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+.+++.++|++++--|.--. .+ .+.+.+|-+.+++.. ++||+++|=
T Consensus 105 ~eai~la~~A~~~Gadavlv~~P~y~~--~s--~~~l~~~f~~va~a~---~lPiilYn~ 157 (314)
T 3qze_A 105 REAVALTEAAKSGGADACLLVTPYYNK--PT--QEGMYQHFRHIAEAV---AIPQILYNV 157 (314)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSSC--CC--HHHHHHHHHHHHHHS---CSCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCC--CC--HHHHHHHHHHHHHhc---CCCEEEEeC
Confidence 345577788899999999999997532 22 356777778888876 589999984
No 131
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=31.85 E-value=1e+02 Score=26.00 Aligned_cols=52 Identities=13% Similarity=-0.017 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
-+++.|.+.+++.++..|+++.|.+..+. + -+++++++++ . | =+..+||-.+
T Consensus 172 ~d~~~l~~~i~~~~~~~i~~~~~~~~~~~--~-l~~i~~l~~~----~---g-~lli~Dea~~ 223 (447)
T 3h7f_A 172 IDMDAVRATALEFRPKVIIAGWSAYPRVL--D-FAAFRSIADE----V---G-AKLLVDMAHF 223 (447)
T ss_dssp CCHHHHHHHHHHHCCSEEEEECSSCCSCC--C-HHHHHHHHHH----H---T-CEEEEECTTT
T ss_pred cCHHHHHHHHHhcCCeEEEEcCCCCCCcc--C-HHHHHHHHHH----c---C-CEEEEECCch
Confidence 35788999998888999999988874333 2 2444444332 2 3 2677899864
No 132
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=31.80 E-value=72 Score=28.16 Aligned_cols=18 Identities=17% Similarity=0.361 Sum_probs=16.8
Q ss_pred eEEEEecCCceEEEEeec
Q 030386 64 FSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 64 rILgLD~G~KRIGVAiSD 81 (178)
.+||||+|+-.+=+++-|
T Consensus 3 ~~lgiDiGtts~k~~l~d 20 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFD 20 (504)
T ss_dssp EEEEEEECSSEEEEEEEC
T ss_pred EEEEEecCCcceEEEEEC
Confidence 589999999999999998
No 133
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=31.77 E-value=38 Score=28.15 Aligned_cols=54 Identities=9% Similarity=0.025 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCchh
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSFS 161 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlSTs 161 (178)
+.+.|.+.+++ ++..|++-.|-+..|..-+ +++.++..+ + .|+ ...+||.+++-
T Consensus 139 d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~----l~~i~~l~~-~---~~~-~li~D~~~~~~ 192 (398)
T 1gc0_A 139 DLQALEAAMTP-ATRVIYFESPANPNMHMAD----IAGVAKIAR-K---HGA-TVVVDNTYCTP 192 (398)
T ss_dssp CHHHHHHHCCT-TEEEEEEESSCTTTCCCCC----HHHHHHHHG-G---GTC-EEEEECTTTHH
T ss_pred CHHHHHHhcCC-CCeEEEEECCCCCCccccc----HHHHHHHHH-H---cCC-EEEEECCCccc
Confidence 45667776654 6788999999999998775 333333333 2 243 56799999754
No 134
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=31.33 E-value=2.3e+02 Score=23.58 Aligned_cols=85 Identities=12% Similarity=0.069 Sum_probs=52.5
Q ss_pred CceEEEEecCCceEEEEeecC--CcccccEEEEc-----c-----C-------h---hHHHHHHHHHHHcCCCEE-EEee
Q 030386 62 GGFSLGVDLGLSRTGLALSKG--FCVRPLTVLKL-----R-----G-------E---KLELQLLEIAQREETDEF-IIGL 118 (178)
Q Consensus 62 ~~rILgLD~G~KRIGVAiSD~--~~A~Pl~tI~~-----~-----~-------~---~~~~~L~~iI~e~~v~~I-VVGL 118 (178)
.+++-+||+|+-.+=+.|.+- -.-.++...+. . + + ..+..+++++++++++.+ +|+-
T Consensus 3 ~~~~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~~~~~v~~v~~vAT 82 (315)
T 3mdq_A 3 SQRIGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGITKGFITEEAMDRALDTLKKFRVILDEHAVVHVIATGT 82 (315)
T ss_dssp -CEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGGGTCCCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CceEEEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccccCCcCHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 357889999998888888772 11122222110 0 0 0 135678899999999865 4442
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEc
Q 030386 119 PKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 119 Pl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvD 155 (178)
- .--.|.....|.+++++++ |++|..++
T Consensus 83 s------A~R~A~N~~~fl~~i~~~t---G~~i~vIs 110 (315)
T 3mdq_A 83 S------AVRSGSNKQVLIDRIKKEV---NIDVEVID 110 (315)
T ss_dssp H------HHHHCTTHHHHHHHHHHHH---CCCEEECC
T ss_pred H------HHHcCcCHHHHHHHHHHHH---CCCeEEeC
Confidence 1 1112334468888998887 78888775
No 135
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=31.25 E-value=1.3e+02 Score=26.63 Aligned_cols=68 Identities=10% Similarity=0.017 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHc-----CCCEEEEeecCCCCCCC-CHHHHHHHHHHHHHHHHhccCC-CcEEEEcCCCchhhhHH
Q 030386 98 LELQLLEIAQRE-----ETDEFIIGLPKSWDGSE-TPQSNKVRSVAGRLAVRAAERS-FSDILITAIFSFSCHFA 165 (178)
Q Consensus 98 ~~~~L~~iI~e~-----~v~~IVVGLPl~mdG~e-~~~a~~Vr~Fa~~L~~~~~~~g-lpV~lvDERlSTs~~~a 165 (178)
.++.+.++.+++ ++..++||-|-..+|.+ .+..+.+++.++++..++...+ .||.+.--.++-....+
T Consensus 273 ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ 347 (482)
T 1uqt_A 273 RFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMK 347 (482)
T ss_dssp HHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHH
T ss_pred HHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHH
Confidence 556777766654 35578899986545432 2345566666666665553222 26887765555544444
No 136
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=30.97 E-value=1.1e+02 Score=24.33 Aligned_cols=56 Identities=9% Similarity=-0.049 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.+++ +...+++-.|-+..|..-+.. .+++.++..++. |+ ...+||-++.
T Consensus 139 d~~~l~~~l~~-~~~~v~i~~p~nptG~~~~~~-~l~~l~~~~~~~----~~-~li~De~~~~ 194 (377)
T 3fdb_A 139 NLHDVEKGFQA-GARSILLCNPYNPLGMVFAPE-WLNELCDLAHRY----DA-RVLVDEIHAP 194 (377)
T ss_dssp CHHHHHHHHHT-TCCEEEEESSBTTTTBCCCHH-HHHHHHHHHHHT----TC-EEEEECTTGG
T ss_pred CHHHHHHHhcc-CCCEEEEeCCCCCCCCCCCHH-HHHHHHHHHHHc----CC-EEEEEcccch
Confidence 56778887776 488999999988888765533 355555444432 32 6678999875
No 137
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=30.95 E-value=1.8e+02 Score=24.06 Aligned_cols=53 Identities=13% Similarity=0.099 Sum_probs=40.0
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+..++.++|++++--|.--. .+ .+.+.+|-+.+++.. ++||+++|=
T Consensus 90 ~~ai~la~~a~~~Gadavlv~~P~y~~--~s--~~~l~~~f~~va~a~---~lPiilYn~ 142 (301)
T 3m5v_A 90 HEAVGLAKFAKEHGADGILSVAPYYNK--PT--QQGLYEHYKAIAQSV---DIPVLLYNV 142 (301)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSSC--CC--HHHHHHHHHHHHHHC---SSCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCC--CC--HHHHHHHHHHHHHhC---CCCEEEEeC
Confidence 445677888999999999999997532 22 356666778888776 589999984
No 138
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=30.93 E-value=1.7e+02 Score=24.44 Aligned_cols=52 Identities=13% Similarity=0.144 Sum_probs=39.4
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEc
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvD 155 (178)
...-++.+.+++.++|++++--|... . +..+.+.+|-+.+++.. ++||+++|
T Consensus 93 ~~ai~la~~A~~~Gadavlv~~P~y~--~--~s~~~l~~~f~~va~a~---~lPiilYn 144 (316)
T 3e96_A 93 STAIELGNAAKAAGADAVMIHMPIHP--Y--VTAGGVYAYFRDIIEAL---DFPSLVYF 144 (316)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCCCS--C--CCHHHHHHHHHHHHHHH---TSCEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCC--C--CCHHHHHHHHHHHHHhC---CCCEEEEe
Confidence 34456778888999999999999752 2 23566777778888876 47999998
No 139
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=30.74 E-value=1e+02 Score=22.81 Aligned_cols=54 Identities=9% Similarity=0.124 Sum_probs=28.7
Q ss_pred HHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEc
Q 030386 99 ELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 99 ~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvD 155 (178)
+..+.+.+++. ...+|+|.|-.......+....+.+|.+.+++..++.+ |.++|
T Consensus 119 l~~li~~l~~~-~~iil~~~~p~~~~~~~~~~~~~~~~n~~l~~~a~~~~--v~~iD 172 (218)
T 1vjg_A 119 TREILTQAKKL-YPVLMISPAPYIEQQDPGRRRRTIDLSQQLALVCQDLD--VPYLD 172 (218)
T ss_dssp HHHHHHHHHHH-SCEEEECCCCCCCTTCTTHHHHHHHHHHHHHHHHHHHT--CCEEC
T ss_pred HHHHHHHHHHh-CcEEEECCCCccccccchHHHHHHHHHHHHHHHHHHcC--CcEEe
Confidence 34455555555 77888888644210112344556666666665544323 55555
No 140
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=30.66 E-value=97 Score=25.41 Aligned_cols=60 Identities=15% Similarity=0.079 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHc---CCC-EEEEeec-CCCCCCCCHHHHHHHHHHHHHHHHhc--cCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQRE---ETD-EFIIGLP-KSWDGSETPQSNKVRSVAGRLAVRAA--ERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e~---~v~-~IVVGLP-l~mdG~e~~~a~~Vr~Fa~~L~~~~~--~~glpV~lvDERlS 159 (178)
+.+.|.+.++++ +.. .+++-.| -|..|..-+..+ +++.++..++..+ +.| -+..+||-|+
T Consensus 163 d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~-l~~l~~~~~~~~~~~~~~-~~li~De~y~ 229 (418)
T 3rq1_A 163 NHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKD-WDSILNFLKDLVAIGRNN-VIIGIDVAYL 229 (418)
T ss_dssp CHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHH-HHHHHHHHHHHHHTSSCE-EEEEEECTTG
T ss_pred CHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHhhhccCCC-eEEEEecccc
Confidence 467787777763 555 7888889 899998766444 5555555442110 113 2677899984
No 141
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=30.54 E-value=1.5e+02 Score=22.84 Aligned_cols=46 Identities=11% Similarity=-0.012 Sum_probs=29.2
Q ss_pred HHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 99 ELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 99 ~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
...+.+++.+.++|+||+- |...+ . ...+.+++ .|+||+++|....
T Consensus 55 ~~~~~~~l~~~~vdgiIi~-~~~~~---~-------~~~~~l~~----~~iPvV~i~~~~~ 100 (288)
T 3gv0_A 55 MVPIRYILETGSADGVIIS-KIEPN---D-------PRVRFMTE----RNMPFVTHGRSDM 100 (288)
T ss_dssp THHHHHHHHHTCCSEEEEE-SCCTT---C-------HHHHHHHH----TTCCEEEESCCCS
T ss_pred HHHHHHHHHcCCccEEEEe-cCCCC---c-------HHHHHHhh----CCCCEEEECCcCC
Confidence 3567777888999999984 43211 1 12333443 3789999997653
No 142
>3g13_A Putative conjugative transposon recombinase; resolvase, PSI-II, target 11223F, structural genomics, prote structure initiative; 2.00A {Clostridium difficile}
Probab=30.51 E-value=62 Score=24.00 Aligned_cols=59 Identities=8% Similarity=-0.022 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCchhhh
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSFSCH 163 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlSTs~~ 163 (178)
..+.++.+.+++.++|.|||=-.-.+.- ....+..+.+.|. +.|+.|+.++|.+.|++-
T Consensus 62 p~l~~ll~~~~~g~id~vvv~~ldRl~R----~~~~~~~~~~~l~----~~gv~l~~~~~~~d~~~~ 120 (169)
T 3g13_A 62 EDFQRMINDCMNGEIDMVFTKSISRFAR----NTLDTLKYVRMLK----ERNIAVYFEDEKINTLTM 120 (169)
T ss_dssp HHHHHHHHHHHTTCCSEEEESCHHHHCS----SHHHHHHHHHHHH----TTTCEEEETTTTEETTSH
T ss_pred HHHHHHHHHHHcCCCcEEEEEecccccc----ChHHHHHHHHHHH----HcCCEEEEecCCcCCCCc
Confidence 4567777888888999999854433222 2344444444453 358999999999865543
No 143
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=30.49 E-value=94 Score=27.55 Aligned_cols=19 Identities=11% Similarity=0.288 Sum_probs=17.1
Q ss_pred ceEEEEecCCceEEEEeec
Q 030386 63 GFSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD 81 (178)
+.+||||+|+..+=+++-|
T Consensus 3 ~~~lgIDiGtts~k~~l~d 21 (510)
T 2p3r_A 3 KYIVALDQGTTSSRAVVMD 21 (510)
T ss_dssp CEEEEEEECSSEEEEEEEC
T ss_pred cEEEEEEcCCcceEEEEEC
Confidence 4799999999999999988
No 144
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=30.22 E-value=1.8e+02 Score=23.89 Aligned_cols=53 Identities=15% Similarity=0.113 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+..++.++|++++--|.--. .+ .+.+.+|-+.+++.. ++||+++|=
T Consensus 83 ~~ai~la~~a~~~Gadavlv~~P~y~~--~~--~~~l~~~f~~ia~a~---~lPiilYn~ 135 (291)
T 3tak_A 83 REAIELTKAAKDLGADAALLVTPYYNK--PT--QEGLYQHYKAIAEAV---ELPLILYNV 135 (291)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCCSSC--CC--HHHHHHHHHHHHHHC---CSCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCC--CC--HHHHHHHHHHHHHhc---CCCEEEEec
Confidence 344577888899999999999997532 22 356667778888775 589999984
No 145
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=30.10 E-value=1.1e+02 Score=26.61 Aligned_cols=17 Identities=35% Similarity=0.558 Sum_probs=15.6
Q ss_pred EEEEecCCceEEEEeec
Q 030386 65 SLGVDLGLSRTGLALSK 81 (178)
Q Consensus 65 ILgLD~G~KRIGVAiSD 81 (178)
++|||+|+..+=+++-|
T Consensus 2 ~lgiDiGtt~~k~~l~d 18 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLN 18 (484)
T ss_dssp EEEEEECSSEEEEEEEC
T ss_pred EEEEEecCcccEEEEEC
Confidence 69999999999988888
No 146
>3o3m_B Beta subunit 2-hydroxyacyl-COA dehydratase; atypical dehydratase, lyase; 1.82A {Clostridium difficile} PDB: 3o3n_B* 3o3o_B
Probab=29.96 E-value=1.4e+02 Score=25.64 Aligned_cols=58 Identities=9% Similarity=0.070 Sum_probs=36.5
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCchhh
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSFSC 162 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlSTs~ 162 (178)
.-.+.+.++++++++|+||.=.+..-+-. .-.... +++.+.+.|+|+..++=.+++.+
T Consensus 300 ~R~~~i~~~~~~~~~DGvI~~~~~~C~~~----~~~~~~----~~~~~~~~giP~l~ie~D~~~~~ 357 (385)
T 3o3m_B 300 KRGSLIVDEVKKKDIDGVIFCMMKFCDPE----EYDYPL----VRKDIEDSGIPTLYVEIDQQTQN 357 (385)
T ss_dssp THHHHHHHHHHHTTCCEEEEEEETTCHHH----HHHHHH----HHHHHHTTTCCEEEEEECTTCSC
T ss_pred HHHHHHHHHHHhCCCCEEEEeccCCCCcc----HhhHHH----HHHHHHHCCCCEEEEEecCCCCC
Confidence 45678999999999999999887643211 111112 22223334889888776666543
No 147
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=29.66 E-value=1.6e+02 Score=24.44 Aligned_cols=53 Identities=9% Similarity=0.085 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+.+++.++|++++--|.--. . ..+.+.+|-+.+++.. ++||+++|=
T Consensus 86 ~~ai~la~~a~~~Gadavlv~~P~y~~--~--~~~~l~~~f~~va~a~---~lPiilYn~ 138 (300)
T 3eb2_A 86 ADAVAQAKLYEKLGADGILAILEAYFP--L--KDAQIESYFRAIADAV---EIPVVIYTN 138 (300)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECCSSC--C--CHHHHHHHHHHHHHHC---SSCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCC--C--CHHHHHHHHHHHHHHC---CCCEEEEEC
Confidence 445577788899999999999997532 2 2455667778888876 479999984
No 148
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=29.64 E-value=86 Score=24.97 Aligned_cols=55 Identities=5% Similarity=-0.014 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
+.+.|.+.+++.++..|++-.|-+..|..-+. +.+.++ .++ .+ .|+ .+.+||-++
T Consensus 125 d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l-~~i~~~---~~~-~~-~~~-~li~D~a~~ 179 (385)
T 2bkw_A 125 PLELITEKLSQNSYGAVTVTHVDTSTAVLSDL-KAISQA---IKQ-TS-PET-FFVVDAVCS 179 (385)
T ss_dssp CHHHHHHHHHHSCCSEEEEESEETTTTEECCH-HHHHHH---HHH-HC-TTS-EEEEECTTT
T ss_pred CHHHHHHHHhcCCCCEEEEEccCCCcCeEcCH-HHHHHH---HHh-hC-CCC-EEEEECccc
Confidence 56788888887678999999998888976663 233333 332 21 022 677899986
No 149
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=29.47 E-value=1.3e+02 Score=25.21 Aligned_cols=53 Identities=8% Similarity=0.061 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+.+++.++|++++--|.--. .+ .+.+.+|-+.+++.. ++||+++|=
T Consensus 106 ~~ai~la~~A~~~Gadavlv~~P~y~~--~s--~~~l~~~f~~va~a~---~lPiilYn~ 158 (315)
T 3na8_A 106 AKTVRRAQFAESLGAEAVMVLPISYWK--LN--EAEVFQHYRAVGEAI---GVPVMLYNN 158 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCSSC--CC--HHHHHHHHHHHHHHC---SSCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCC--CC--HHHHHHHHHHHHHhC---CCcEEEEeC
Confidence 345677888999999999999997532 22 466777778888876 579999984
No 150
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=29.10 E-value=68 Score=25.63 Aligned_cols=54 Identities=19% Similarity=0.244 Sum_probs=35.1
Q ss_pred HHHHHHHHHHcCCCEEEEeecCC---CCCCCCH-----------HHHHHHHHHHHHHHHhccCCCcEEEEc
Q 030386 99 ELQLLEIAQREETDEFIIGLPKS---WDGSETP-----------QSNKVRSVAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 99 ~~~L~~iI~e~~v~~IVVGLPl~---mdG~e~~-----------~a~~Vr~Fa~~L~~~~~~~glpV~lvD 155 (178)
+.++.+.+.+.++|.|-+|.|.. +||..-+ ..+...+.++++++.+ ++|+++.+
T Consensus 34 ~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~---~~Pv~~m~ 101 (262)
T 1rd5_A 34 TAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPEL---SCPVVLLS 101 (262)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGC---SSCEEEEC
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC---CCCEEEEe
Confidence 34555566778999999999986 4553322 2344556667776653 57888754
No 151
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=29.01 E-value=1.7e+02 Score=21.32 Aligned_cols=57 Identities=9% Similarity=0.058 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHcC--CCEEEEeecCCCCCCCC------HHHHHHHHHHHHHHHHhccCCCcEEEEc
Q 030386 98 LELQLLEIAQREE--TDEFIIGLPKSWDGSET------PQSNKVRSVAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 98 ~~~~L~~iI~e~~--v~~IVVGLPl~mdG~e~------~~a~~Vr~Fa~~L~~~~~~~glpV~lvD 155 (178)
.+..+.+.+++.. ...+|+|.|-......- .....+++|-+.+++...+. -.+.++|
T Consensus 110 ~l~~~i~~l~~~~p~~~iil~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~l~~~a~~~-~~~~~iD 174 (214)
T 2hsj_A 110 NLEAIIQSVARDYPLTEIKLLSILPVNEREEYQQAVYIRSNEKIQNWNQAYQELASAY-MQVEFVP 174 (214)
T ss_dssp HHHHHHHHHHHHCTTCEEEEECCCCCCCSGGGHHHHTTCCHHHHHHHHHHHHHHHTTC-TTEEEEC
T ss_pred HHHHHHHHHHHhCCCCeEEEEecCCCCcccccccccccccHHHHHHHHHHHHHHHHHc-CCCEEEE
Confidence 3455556666666 56777887643222110 12466777888887776542 1577776
No 152
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=28.90 E-value=37 Score=27.46 Aligned_cols=53 Identities=13% Similarity=0.106 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
+.+.|.+.++++++..|++-.|-+..|..-+ -+.+.++++ +. |+ ...+||-++
T Consensus 131 d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~-~~~i~~l~~----~~---~~-~li~Dea~~ 183 (396)
T 2ch1_A 131 SLETLARAIELHQPKCLFLTHGDSSSGLLQP-LEGVGQICH----QH---DC-LLIVDAVAS 183 (396)
T ss_dssp CHHHHHHHHHHHCCSEEEEESEETTTTEECC-CTTHHHHHH----HT---TC-EEEEECTTT
T ss_pred CHHHHHHHHHhCCCCEEEEECCCCCCceecC-HHHHHHHHH----Hc---CC-EEEEEcccc
Confidence 5678888888768999999999888887665 233433333 22 32 678899986
No 153
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=28.83 E-value=1.7e+02 Score=24.09 Aligned_cols=53 Identities=11% Similarity=0.087 Sum_probs=39.0
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+..++.++|++++--|.--.. ..+.+.+|-+.+++.. ++||+++|=
T Consensus 82 ~~ai~la~~A~~~Gadavlv~~P~y~~~----s~~~l~~~f~~ia~a~---~lPiilYn~ 134 (292)
T 2vc6_A 82 AEAIAFVRHAQNAGADGVLIVSPYYNKP----TQEGIYQHFKAIDAAS---TIPIIVYNI 134 (292)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSSCC----CHHHHHHHHHHHHHHC---SSCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCC----CHHHHHHHHHHHHHhC---CCCEEEEeC
Confidence 3445778888999999999999975322 2356666667787775 579999884
No 154
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=28.78 E-value=1.6e+02 Score=22.92 Aligned_cols=57 Identities=12% Similarity=-0.013 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCC-CC-C--CCCHHHHHHHHHHHHHHHHhccCCCcEEEE
Q 030386 98 LELQLLEIAQREETDEFIIGLPKS-WD-G--SETPQSNKVRSVAGRLAVRAAERSFSDILI 154 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~-md-G--~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lv 154 (178)
.+.+..++..+-++..||+.-... .+ + ...+.-+.+.+..+++.+..++.|+.+.+-
T Consensus 105 ~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE 165 (287)
T 3kws_A 105 TMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFE 165 (287)
T ss_dssp HHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 456777788889999999853321 11 1 222333344444455555554557777775
No 155
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=28.71 E-value=1.7e+02 Score=24.05 Aligned_cols=53 Identities=13% Similarity=0.078 Sum_probs=38.9
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+..++.++|++++--|.--.. + .+.+.+|-+.+++.. ++||+++|=
T Consensus 82 ~~ai~la~~A~~~Gadavlv~~P~y~~~--s--~~~l~~~f~~va~a~---~lPiilYn~ 134 (294)
T 2ehh_A 82 HEAVHLTAHAKEVGADGALVVVPYYNKP--T--QRGLYEHFKTVAQEV---DIPIIIYNI 134 (294)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSSCC--C--HHHHHHHHHHHHHHC---CSCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCC--C--HHHHHHHHHHHHHhc---CCCEEEEeC
Confidence 3445777888999999999999975322 2 355666667787775 579999984
No 156
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=28.55 E-value=1.1e+02 Score=26.90 Aligned_cols=19 Identities=21% Similarity=0.312 Sum_probs=16.9
Q ss_pred ceEEEEecCCceEEEEeec
Q 030386 63 GFSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD 81 (178)
+.+||||+|+..+=.++-|
T Consensus 3 ~~~lgiDiGtt~~k~~l~d 21 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFD 21 (497)
T ss_dssp CEEEEEEECSSEEEEEEEC
T ss_pred cEEEEEecCCchhEEEEEC
Confidence 3689999999999988888
No 157
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=28.51 E-value=35 Score=24.18 Aligned_cols=24 Identities=17% Similarity=0.224 Sum_probs=20.3
Q ss_pred hHHHHHHHH-HHHcCCCEEEEeecC
Q 030386 97 KLELQLLEI-AQREETDEFIIGLPK 120 (178)
Q Consensus 97 ~~~~~L~~i-I~e~~v~~IVVGLPl 120 (178)
...+.|.+. ++++++|.||+|-.-
T Consensus 105 ~~~~~I~~~~a~~~~~DlIV~G~~g 129 (156)
T 3fg9_A 105 DVDDVILEQVIPEFKPDLLVTGADT 129 (156)
T ss_dssp CHHHHHHHTHHHHHCCSEEEEETTC
T ss_pred CHHHHHHHHHHHhcCCCEEEECCCC
Confidence 455788898 899999999999763
No 158
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=28.40 E-value=39 Score=27.08 Aligned_cols=53 Identities=13% Similarity=0.078 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
+.+.|.+.++++++..|++-.|-+..|..-+ -+++.+++ +++ | -...+||-.+
T Consensus 136 d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~-l~~i~~l~----~~~---~-~~li~De~~~ 188 (393)
T 3kgw_A 136 TLQEVEEGLAQHKPVLLFLVHGESSTGVVQP-LDGFGELC----HRY---Q-CLLLVDSVAS 188 (393)
T ss_dssp CHHHHHHHHHHHCCSEEEEESEETTTTEECC-CTTHHHHH----HHT---T-CEEEEECTTT
T ss_pred CHHHHHHHHhhCCCcEEEEeccCCcchhhcc-HHHHHHHH----HHc---C-CEEEEECCcc
Confidence 5788999998888999999999888887665 23344433 232 3 2677899876
No 159
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=28.24 E-value=1.5e+02 Score=24.55 Aligned_cols=53 Identities=11% Similarity=0.098 Sum_probs=39.2
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+..++.++|++++--|.--.. + .+.+.+|-+.+++.. ++||+++|=
T Consensus 94 ~~ai~la~~A~~~Gadavlv~~P~y~~~--s--~~~l~~~f~~va~a~---~lPiilYn~ 146 (301)
T 1xky_A 94 HASIDLTKKATEVGVDAVMLVAPYYNKP--S--QEGMYQHFKAIAEST---PLPVMLYNV 146 (301)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSSCC--C--HHHHHHHHHHHHHTC---SSCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCC--C--HHHHHHHHHHHHHhc---CCCEEEEeC
Confidence 3445778888999999999999975322 2 356666667787765 589999984
No 160
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=28.21 E-value=2.3e+02 Score=23.69 Aligned_cols=53 Identities=13% Similarity=0.125 Sum_probs=40.0
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+.+++.++|++++--|.--. .+ .+.+.+|-+.+++.. ++||+++|=
T Consensus 104 ~~ai~la~~A~~~Gadavlv~~P~y~~--~~--~~~l~~~f~~va~a~---~lPiilYn~ 156 (315)
T 3si9_A 104 SEAVELAKHAEKAGADAVLVVTPYYNR--PN--QRGLYTHFSSIAKAI---SIPIIIYNI 156 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSSC--CC--HHHHHHHHHHHHHHC---SSCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCC--CC--HHHHHHHHHHHHHcC---CCCEEEEeC
Confidence 345578888999999999999997532 22 356667778888775 589999984
No 161
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=28.00 E-value=1.8e+02 Score=24.19 Aligned_cols=53 Identities=15% Similarity=0.175 Sum_probs=39.2
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+..++.++|++++--|.--. .+ .+.+.+|-+.+++.. ++||+++|=
T Consensus 98 ~~ai~la~~A~~~Gadavlv~~P~y~~--~~--~~~l~~~f~~ia~a~---~lPiilYn~ 150 (304)
T 3cpr_A 98 RTSVELAEAAASAGADGLLVVTPYYSK--PS--QEGLLAHFGAIAAAT---EVPICLYDI 150 (304)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSSC--CC--HHHHHHHHHHHHHHC---CSCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCC--CC--HHHHHHHHHHHHHhc---CCCEEEEeC
Confidence 344577888899999999999997532 22 455666667787775 579999985
No 162
>1czn_A Flavodoxin; FMN binding, redox potential, electron transport; HET: FMN; 1.70A {Synechococcus elongatus} SCOP: c.23.5.1 PDB: 1czl_A* 1czu_A* 1d04_A* 1ofv_A* 1czr_A* 1czk_A* 1czo_A* 1czh_A* 1d03_A*
Probab=27.42 E-value=57 Score=23.76 Aligned_cols=47 Identities=15% Similarity=0.082 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHcCCCEEE--------------------EeecCCCCCCCCHHHHHHHHHHHHHHHHh
Q 030386 98 LELQLLEIAQREETDEFI--------------------IGLPKSWDGSETPQSNKVRSVAGRLAVRA 144 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IV--------------------VGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~ 144 (178)
....+.+++++.+...+- +|+|+..+.......+++++|++.+.+.+
T Consensus 101 a~~~l~~~l~~~g~~~~~~~~~~g~~~~~s~~~~~~~~~gl~~~~~~~~~~~~~~~~~w~~~~~~~~ 167 (169)
T 1czn_A 101 AMGILEEKISSLGSQTVGYWPIEGYDFNESKAVRNNQFVGLAIDEDNQPDLTKNRIKTWVSQLKSEF 167 (169)
T ss_dssp HHHHHHHHHHHTTCEECCCEECTTCCCSCCTTEETTEESSEEECTTTCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCEEEEEecCCCcceecchheeCCeeeeeeecCCCccccCHHHHHHHHHHHHHHh
Confidence 456788888776643321 25554433333456788999999998765
No 163
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=27.41 E-value=1.4e+02 Score=24.80 Aligned_cols=53 Identities=9% Similarity=0.093 Sum_probs=39.4
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+.+++.++|++++--|.--.. ..+.+.+|-+.+++.. ++||+++|=
T Consensus 97 ~~ai~la~~a~~~Gadavlv~~P~y~~~----s~~~l~~~f~~va~a~---~lPiilYn~ 149 (304)
T 3l21_A 97 AHSIRLAKACAAEGAHGLLVVTPYYSKP----PQRGLQAHFTAVADAT---ELPMLLYDI 149 (304)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCCSSCC----CHHHHHHHHHHHHTSC---SSCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCCC----CHHHHHHHHHHHHHhc---CCCEEEEeC
Confidence 4556778889999999999999985332 2455666667777665 589999984
No 164
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=27.22 E-value=1.2e+02 Score=24.68 Aligned_cols=56 Identities=11% Similarity=0.103 Sum_probs=33.3
Q ss_pred HHHHHHHHHHH----cCCCEEEEeecC-CCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQR----EETDEFIIGLPK-SWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e----~~v~~IVVGLPl-~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
+.+.|.+.+++ .++..|++ .|. +..|...+..+..++.++..++. |+ .+.+||-++
T Consensus 183 d~~~l~~~l~~~~~~~~~~~v~~-~p~~~ntG~~~~~~~~l~~l~~l~~~~----~~-~li~De~~~ 243 (426)
T 1sff_A 183 AIASIHRIFKNDAAPEDIAAIVI-EPVQGEGGFYASSPAFMQRLRALCDEH----GI-MLIADEVQS 243 (426)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEE-CSBCTTTTSCBCCHHHHHHHHHHHHHH----TC-EEEEECTTT
T ss_pred HHHHHHHHHHhccCCCceEEEEE-ecccCCCCcccCCHHHHHHHHHHHHHc----CC-EEEEechhh
Confidence 56788888875 34444444 553 22675555455555555544433 33 677899987
No 165
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=27.19 E-value=1.9e+02 Score=23.72 Aligned_cols=53 Identities=11% Similarity=0.035 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+..++.++|++++--|.--.. + .+.+.+|-+.+++.. ++||+++|=
T Consensus 86 ~~ai~la~~a~~~Gadavlv~~P~y~~~--~--~~~l~~~f~~va~a~---~lPiilYn~ 138 (293)
T 1f6k_A 86 KEAVELGKYATELGYDCLSAVTPFYYKF--S--FPEIKHYYDTIIAET---GSNMIVYSI 138 (293)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCCSSCC--C--HHHHHHHHHHHHHHH---CCCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCC--C--HHHHHHHHHHHHHhC---CCCEEEEEC
Confidence 3445778888999999999999975332 2 456666667787776 479999984
No 166
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=27.14 E-value=1.4e+02 Score=24.05 Aligned_cols=52 Identities=8% Similarity=-0.016 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.+++.++..|++.-|.+ |...+ -+.+.+++ + +. |+ ...+||-++.
T Consensus 151 d~~~l~~~l~~~~~~~v~~~~p~~--~~~~~-l~~i~~l~---~-~~---~~-~li~Dea~~~ 202 (407)
T 2dkj_A 151 DLEEVRRLALEHRPKVIVAGASAY--PRFWD-FKAFREIA---D-EV---GA-YLVVDMAHFA 202 (407)
T ss_dssp CHHHHHHHHHHHCCSEEEECCSSC--CSCCC-HHHHHHHH---H-HH---TC-EEEEECTTTH
T ss_pred CHHHHHHHHhhcCCeEEEEecccc--CCCCC-HHHHHHHH---H-Hc---CC-EEEEEccccc
Confidence 567888888877899999987876 44333 23333333 2 22 32 6778999875
No 167
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=26.98 E-value=51 Score=26.66 Aligned_cols=53 Identities=11% Similarity=0.122 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
+.+.|.+.++++++..|++-.|-+..|..-+. +++.++++ +. | -...+||-++
T Consensus 147 d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l-~~i~~l~~----~~---~-~~li~Dea~~ 199 (393)
T 1vjo_A 147 SLEELRTALETHRPAILALVHAETSTGARQPL-EGVGELCR----EF---G-TLLLVDTVTS 199 (393)
T ss_dssp CHHHHHHHHHHHCCSEEEEESEETTTTEECCC-TTHHHHHH----HH---T-CEEEEECTTT
T ss_pred CHHHHHHHHhhCCceEEEEeccCCCcceeccH-HHHHHHHH----Hc---C-CEEEEECCcc
Confidence 56788888877678899999998888876552 33333333 22 2 2678899998
No 168
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=26.97 E-value=1.7e+02 Score=22.28 Aligned_cols=47 Identities=15% Similarity=0.171 Sum_probs=29.5
Q ss_pred HHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 99 ELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 99 ~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
...+.+.+.+.++|+||+ .|...+ . ...+.+++ .|+||+++|.....
T Consensus 58 ~~~~~~~~~~~~vdgiIi-~~~~~~---~-------~~~~~l~~----~~iPvV~~~~~~~~ 104 (292)
T 3k4h_A 58 FNGVVKMVQGRQIGGIIL-LYSREN---D-------RIIQYLHE----QNFPFVLIGKPYDR 104 (292)
T ss_dssp HHHHHHHHHTTCCCEEEE-SCCBTT---C-------HHHHHHHH----TTCCEEEESCCSSC
T ss_pred HHHHHHHHHcCCCCEEEE-eCCCCC---h-------HHHHHHHH----CCCCEEEECCCCCC
Confidence 345666777889999998 343221 1 12333433 37899999987643
No 169
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=26.89 E-value=2.4e+02 Score=23.02 Aligned_cols=53 Identities=15% Similarity=0.152 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+..++.++|++++--|.--.. ..+.+.+|-+.+++.. ++||+++|=
T Consensus 82 ~~ai~la~~a~~~Gadavlv~~P~y~~~----s~~~l~~~f~~ia~a~---~lPiilYn~ 134 (289)
T 2yxg_A 82 EEAIELSVFAEDVGADAVLSITPYYNKP----TQEGLRKHFGKVAESI---NLPIVLYNV 134 (289)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCCSSCC----CHHHHHHHHHHHHHHC---SSCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCC----CHHHHHHHHHHHHHhc---CCCEEEEeC
Confidence 3445778888999999999999975322 2356666667787775 579999984
No 170
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=26.84 E-value=2.5e+02 Score=22.72 Aligned_cols=53 Identities=11% Similarity=0.073 Sum_probs=32.3
Q ss_pred hHHHHHHHHHHHcCCCEEEEeec-CCCCCCCCHH-HHHHHHHHHHHHHHhccCCCcEEEE
Q 030386 97 KLELQLLEIAQREETDEFIIGLP-KSWDGSETPQ-SNKVRSVAGRLAVRAAERSFSDILI 154 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLP-l~mdG~e~~~-a~~Vr~Fa~~L~~~~~~~glpV~lv 154 (178)
..++++.+.++++++|.||+.== +-..+..+.. .+.+.+|.++|.+. +||+++
T Consensus 48 ~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~~-----~pv~~i 102 (336)
T 2q8u_A 48 KALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRT-----APVVVL 102 (336)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHHH-----SCEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHHhc-----CCEEEE
Confidence 45678888889999998876544 4334444433 23445555555432 367765
No 171
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=26.84 E-value=63 Score=25.98 Aligned_cols=52 Identities=19% Similarity=0.124 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.+++ ++..|++-.|-+..|..-+.. +.++++ +. | -...+||-++-
T Consensus 143 d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~--l~~~~~----~~---~-~~li~De~~~~ 194 (370)
T 2z61_A 143 TVESLEEALSD-KTKAIIINSPSNPLGEVIDRE--IYEFAY----EN---I-PYIISDEIYNG 194 (370)
T ss_dssp SHHHHHHHCCS-SEEEEEEESSCTTTCCCCCHH--HHHHHH----HH---C-SEEEEECTTTT
T ss_pred CHHHHHHhccc-CceEEEEcCCCCCcCcccCHH--HHHHHH----Hc---C-CEEEEEcchhh
Confidence 34666666654 677889988988889877655 444433 33 3 26778999874
No 172
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=26.83 E-value=2e+02 Score=21.56 Aligned_cols=55 Identities=15% Similarity=0.183 Sum_probs=31.8
Q ss_pred HHHHHHHHHHc--CCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEc
Q 030386 99 ELQLLEIAQRE--ETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 99 ~~~L~~iI~e~--~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvD 155 (178)
+..+.+.+++. +...+|+|.|-. .....+....+.+|-+.+++.... ...+.++|
T Consensus 118 l~~~i~~l~~~~p~~~iil~~~~p~-~~~~~~~~~~~~~~n~~l~~~a~~-~~~v~~iD 174 (229)
T 1fxw_F 118 IEAIVQLINTRQPQAKIIVLGLLPR-GEKPNPLRQKNAKVNQLLKVSLPK-LANVQLLD 174 (229)
T ss_dssp HHHHHHHHHHHCTTCEEEEECCCCC-SSSCCHHHHHHHHHHHHHHHHSSS-SSSEEEEC
T ss_pred HHHHHHHHHHHCCCCeEEEEeCCCC-CCchhhHHHHHHHHHHHHHHHHhc-CCCeEEEe
Confidence 34455555555 455677787533 222235566777887778766531 23577776
No 173
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=26.61 E-value=58 Score=25.87 Aligned_cols=55 Identities=9% Similarity=0.065 Sum_probs=38.4
Q ss_pred HHHHHHHHHHH-cCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQR-EETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e-~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
+.+.|.+.+++ .++..|++-.|-+..|..-+..+ +++.++.. +.| -...+||-++
T Consensus 128 d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~-l~~l~~~~-----~~~-~~li~De~~~ 183 (354)
T 3ly1_A 128 DIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADV-IEPWIASK-----PAN-TMFIVDEAYA 183 (354)
T ss_dssp CHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHH-HHHHHHTC-----CTT-EEEEEECTTG
T ss_pred CHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHH-HHHHHHhC-----CCC-eEEEEeccHH
Confidence 56788888886 67899999899888888766443 44443332 123 3677899986
No 174
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=26.38 E-value=77 Score=27.18 Aligned_cols=48 Identities=4% Similarity=0.072 Sum_probs=33.8
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEE-Ec
Q 030386 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDIL-IT 155 (178)
Q Consensus 100 ~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~l-vD 155 (178)
.++.+.+.+.+.|.|+|| - +|- +.-.+.+.+..+.+++.+ .+||++ .-
T Consensus 56 ~~~~~~~~~sGtDai~VG-S---~~v-t~~~~~~~~~v~~ik~~~---~lPvil~fP 104 (286)
T 3vk5_A 56 VEKAAELTRLGFAAVLLA-S---TDY-ESFESHMEPYVAAVKAAT---PLPVVLHFP 104 (286)
T ss_dssp HHHHHHHHHTTCSCEEEE-C---SCC-SSHHHHHHHHHHHHHHHC---SSCEEEECC
T ss_pred HHHHHHHHhcCCCEEEEc-c---CCC-CcchHHHHHHHHHHHHhC---CCCEEEECC
Confidence 345555677899999999 3 232 323467788888898876 589999 55
No 175
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=26.27 E-value=2e+02 Score=23.84 Aligned_cols=54 Identities=13% Similarity=-0.029 Sum_probs=39.5
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+..++.++|++++--|.--.. ..+.+.+|-+.+++..+ ++||+++|=
T Consensus 93 ~~ai~la~~A~~~Gadavlv~~P~y~~~----s~~~l~~~f~~va~a~~--~lPiilYn~ 146 (303)
T 2wkj_A 93 AESQQLAASAKRYGFDAVSAVTPFYYPF----SFEEHCDHYRAIIDSAD--GLPMVVYNI 146 (303)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCCSSCC----CHHHHHHHHHHHHHHHT--TCCEEEEEC
T ss_pred HHHHHHHHHHHhCCCCEEEecCCCCCCC----CHHHHHHHHHHHHHhCC--CCCEEEEeC
Confidence 3445777888999999999999975332 24566667777887763 279999984
No 176
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=26.26 E-value=1.5e+02 Score=23.96 Aligned_cols=52 Identities=15% Similarity=0.102 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
-+.+.|.+.+++.++..|++..|-+ |..-+ -+.+.+++ + ++ |+ ...+||-.+
T Consensus 151 ~d~~~l~~~i~~~~~~~v~~~~~~~--G~~~~-l~~i~~l~---~-~~---~~-~li~Dea~~ 202 (417)
T 3n0l_A 151 IDYEKVREIAKKEKPKLIVCGASAY--ARVID-FAKFREIA---D-EI---GA-YLFADIAHI 202 (417)
T ss_dssp CCHHHHHHHHHHHCCSEEEECCSSC--CSCCC-HHHHHHHH---H-HH---TC-EEEEECTTT
T ss_pred cCHHHHHHHHHhcCCeEEEECCccc--CccCC-HHHHHHHH---H-Hc---CC-EEEEECccc
Confidence 3578899989878899999887763 76655 23333333 2 32 33 677899854
No 177
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=26.17 E-value=1.3e+02 Score=23.45 Aligned_cols=54 Identities=4% Similarity=0.012 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHc------CCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCC
Q 030386 98 LELQLLEIAQRE------ETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIF 158 (178)
Q Consensus 98 ~~~~L~~iI~e~------~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERl 158 (178)
+.+.|.+.+++. ++..|++-.| +..|..-+. +.+++.++..++. | -...+||-+
T Consensus 127 d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~-~~l~~i~~~~~~~----~-~~li~De~~ 186 (359)
T 1svv_A 127 RVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTK-QELEDISASCKEH----G-LYLFLDGAR 186 (359)
T ss_dssp CHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCH-HHHHHHHHHHHHH----T-CEEEEECTT
T ss_pred cHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCH-HHHHHHHHHHHHh----C-CEEEEEccc
Confidence 467888888876 3778888878 767776653 5566665555443 3 267789987
No 178
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=26.10 E-value=86 Score=26.80 Aligned_cols=62 Identities=13% Similarity=0.037 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCC------CCCC-----HHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWD------GSET-----PQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~md------G~e~-----~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
..+.+..++++.+++.|||=.+-.+- |..+ .+++.+.++...|....++.+++|++.++-..
T Consensus 129 ~~~~~~~l~~~~~~~lVVIDsl~~l~~~~e~~~~~g~~~~~~q~r~~~~~l~~L~~~a~~~~~~VI~~nq~~~ 201 (356)
T 1u94_A 129 ALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRM 201 (356)
T ss_dssp HHHHHHHHHHHTCCSEEEEECGGGCCCHHHHTTC------CHHHHHHHHHHHHHHHHHHHHTCEEEEEEC---
T ss_pred HHHHHHHHHhccCCCEEEEcCHHHhcchhhhccccccchhHHHHHHHHHHHHHHHHHHHHhCCEEEEEecccc
Confidence 44556667778999999996654432 2111 34455666667776555455889999887654
No 179
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=26.05 E-value=1.1e+02 Score=27.41 Aligned_cols=19 Identities=21% Similarity=0.455 Sum_probs=17.0
Q ss_pred ceEEEEecCCceEEEEeec
Q 030386 63 GFSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD 81 (178)
+.+||||+|+..+=+++-|
T Consensus 5 ~~~lgIDiGtts~ka~l~d 23 (554)
T 3l0q_A 5 SYFIGVDVGTGSARAGVFD 23 (554)
T ss_dssp CEEEEEEECSSEEEEEEEE
T ss_pred cEEEEEEECcccEEEEEEC
Confidence 4799999999999888888
No 180
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=25.77 E-value=91 Score=24.83 Aligned_cols=54 Identities=11% Similarity=0.158 Sum_probs=36.8
Q ss_pred HHHHHHHHHHH-cCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQR-EETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e-~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.+++ .++..|++-.|-+..|..-+. +.+.++ .+ +. |+ ...+||-++-
T Consensus 133 d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l-~~i~~l---~~-~~---~~-~li~D~a~~~ 187 (386)
T 2dr1_A 133 KPEDLDDALRKNPDVEAVTITYNETSTGVLNPL-PELAKV---AK-EH---DK-LVFVDAVSAM 187 (386)
T ss_dssp CHHHHHHHHHHCTTCCEEEEESEETTTTEECCH-HHHHHH---HH-HT---TC-EEEEECTTTB
T ss_pred CHHHHHHHHhcCCCCcEEEEEeecCCcchhCCH-HHHHHH---HH-Hc---CC-eEEEEccccc
Confidence 56788888875 578999999888988977652 333333 33 22 33 6778998863
No 181
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=25.75 E-value=49 Score=26.85 Aligned_cols=19 Identities=26% Similarity=0.522 Sum_probs=17.2
Q ss_pred ceEEEEecCCceEEEEeec
Q 030386 63 GFSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD 81 (178)
+.+||||.|+..|-+++-|
T Consensus 3 ~~~lGiD~Gst~~k~~l~d 21 (270)
T 1hux_A 3 IYTLGIDVGSTASKCIILK 21 (270)
T ss_dssp CEEEEEEECSSEEEEEEEE
T ss_pred cEEEEEEeccceEEEEEEe
Confidence 4689999999999999987
No 182
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=25.59 E-value=41 Score=23.70 Aligned_cols=42 Identities=7% Similarity=0.031 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHH
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLA 141 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~ 141 (178)
....+.+.+++.+. -+||-|+..+|..++..+++++|+++|.
T Consensus 95 a~~~l~~~l~~~G~--~~v~~~~~~~~~p~~~d~~~~~~~~~l~ 136 (138)
T 5nul_A 95 WMRDFEERMNGYGC--VVVETPLIVQNEPDEAEQDCIEFGKKIA 136 (138)
T ss_dssp HHHHHHHHHHHTTC--EECSCCEEEESSCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCC--EEECCceEEecCCCHHHHHHHHHHHHHh
Confidence 44667777776543 4556666666655443378888888775
No 183
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=25.38 E-value=61 Score=22.38 Aligned_cols=41 Identities=17% Similarity=0.135 Sum_probs=24.4
Q ss_pred CCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEE
Q 030386 110 ETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILI 154 (178)
Q Consensus 110 ~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lv 154 (178)
+.|.||+|-|....|...+ ..++.|.+++...+ .|.++..+
T Consensus 46 ~~d~vi~g~p~y~~~~~~~--~~~~~fl~~l~~~l--~~k~~~~~ 86 (137)
T 2fz5_A 46 SKDVILLGCPAMGSEELED--SVVEPFFTDLAPKL--KGKKVGLF 86 (137)
T ss_dssp TCSEEEEECCCBTTTBCCH--HHHHHHHHHHGGGC--SSCEEEEE
T ss_pred cCCEEEEEccccCCCCCCH--HHHHHHHHHhhhhc--CCCEEEEE
Confidence 5788999999875554332 12566777765443 24555543
No 184
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=25.16 E-value=1.8e+02 Score=23.99 Aligned_cols=53 Identities=8% Similarity=-0.077 Sum_probs=39.2
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+..++.++|++++--|.--.- ..+.+.+|-+.+++.. ++||+++|=
T Consensus 82 ~~ai~la~~A~~~Gadavlv~~P~y~~~----s~~~l~~~f~~va~a~---~lPiilYn~ 134 (297)
T 2rfg_A 82 VEAVRYAQHAQQAGADAVLCVAGYYNRP----SQEGLYQHFKMVHDAI---DIPIIVYNI 134 (297)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCTTTCC----CHHHHHHHHHHHHHHC---SSCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCC----CHHHHHHHHHHHHHhc---CCCEEEEeC
Confidence 3445777888999999999999975322 2456666667788775 579999984
No 185
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=24.96 E-value=66 Score=26.13 Aligned_cols=53 Identities=11% Similarity=-0.021 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHc-----CCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQRE-----ETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e~-----~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
+.+.|.+.+++. ++..|++-.|-+..|..-+ -+++.++++ +. | -...+||-++
T Consensus 160 d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~-~~~i~~l~~----~~---~-~~li~De~~~ 217 (401)
T 1fc4_A 160 DMQELEARLKEAREAGARHVLIATDGVFSMDGVIAN-LKGVCDLAD----KY---D-ALVMVDDSHA 217 (401)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECC-HHHHHHHHH----HT---T-EEEEEECTTT
T ss_pred CHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCC-HHHHHHHHH----Hc---C-CEEEEECccc
Confidence 356677777653 6889999889898897666 333333332 22 3 2677899996
No 186
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=24.96 E-value=2e+02 Score=23.98 Aligned_cols=51 Identities=14% Similarity=-0.009 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEc
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvD 155 (178)
..-++.+..++.++|++++--|.--.. + .+.+.+|-+.+++.. ++||+++|
T Consensus 94 ~ai~la~~A~~~Gadavlv~~P~y~~~--s--~~~l~~~f~~va~a~---~lPiilYn 144 (314)
T 3d0c_A 94 TAIELGKSAIDSGADCVMIHQPVHPYI--T--DAGAVEYYRNIIEAL---DAPSIIYF 144 (314)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCCSCC--C--HHHHHHHHHHHHHHS---SSCEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCCC--C--HHHHHHHHHHHHHhC---CCCEEEEe
Confidence 345677888999999999999975322 2 355666667788775 47999999
No 187
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=24.66 E-value=2.2e+02 Score=21.16 Aligned_cols=55 Identities=13% Similarity=0.177 Sum_probs=30.7
Q ss_pred HHHHHHHHHHcCCCEEEEee-cCCCC---CCCCHHHHHHHHHHHHHHHHhccCCCcEEEEc
Q 030386 99 ELQLLEIAQREETDEFIIGL-PKSWD---GSETPQSNKVRSVAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 99 ~~~L~~iI~e~~v~~IVVGL-Pl~md---G~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvD 155 (178)
+..+.+.+++.++..++++. |.... .......++++++.+.+++..++.+ +.++|
T Consensus 107 l~~ii~~~~~~~~~iil~~~~P~~~~~~~~~~~~~~~~i~~~n~~i~~~a~~~~--v~~iD 165 (209)
T 4hf7_A 107 IASMAELAKANKIKVILTSVLPAAEFPWRREIKDAPQKIQSLNARIEAYAKANK--IPFVN 165 (209)
T ss_dssp HHHHHHHHHHTTCEEEEECCCCCSCCTTCTTCCCHHHHHHHHHHHHHHHHHHTT--CCEEC
T ss_pred HHHhhHHHhccCceEEEEeeeccCcccccccccchhHHHHHHHHHHHHHHHhcC--CeEee
Confidence 34455556667777777775 33322 2233455667777777765544434 55555
No 188
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=24.54 E-value=1.4e+02 Score=23.65 Aligned_cols=53 Identities=21% Similarity=0.260 Sum_probs=37.6
Q ss_pred HHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 99 ELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 99 ~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
.+.|.+.+++ +..+++-.|-+..|..-+.. .+++.++..++. | -...+||-++
T Consensus 135 ~~~l~~~l~~--~~~v~i~~p~nptG~~~~~~-~l~~i~~~~~~~----~-~~li~De~~~ 187 (361)
T 3ftb_A 135 YEDIISKIDD--VDSVIIGNPNNPNGGLINKE-KFIHVLKLAEEK----K-KTIIIDEAFI 187 (361)
T ss_dssp HHHHHHHTTT--CSEEEEETTBTTTTBCCCHH-HHHHHHHHHHHH----T-CEEEEECSSG
T ss_pred HHHHHHhccC--CCEEEEeCCCCCCCCCCCHH-HHHHHHHHhhhc----C-CEEEEECcch
Confidence 3778887776 88999999988888766543 356665555443 3 3678899986
No 189
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=24.13 E-value=49 Score=26.55 Aligned_cols=54 Identities=17% Similarity=0.176 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
+.+.|.+.++ .++..|++-.|-+..|..-+.. .+.+.++.. + .| -...+||-++
T Consensus 142 d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~~~-~l~~l~~~~----~-~~-~~li~De~~~ 195 (365)
T 3get_A 142 EFKKLYETHK-DEIKLIFLCLPNNPLGECLDAS-EATEFIKGV----N-ED-CLVVIDAAYN 195 (365)
T ss_dssp HHHHHHHHTT-TTEEEEEEESSCTTTCCCCCHH-HHHHHHHTS----C-TT-SEEEEECTTH
T ss_pred CHHHHHHHhC-CCCCEEEEcCCCCCCCCCcCHH-HHHHHHHhC----C-CC-cEEEEeCccH
Confidence 4456776665 5788899999999889876644 344444422 1 23 3678999986
No 190
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=24.11 E-value=2.9e+02 Score=22.49 Aligned_cols=54 Identities=11% Similarity=0.074 Sum_probs=39.3
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+..++.++|++++--|.--. .+..+.+.+|-+.+++.. ++||+++|=
T Consensus 77 ~~ai~la~~A~~~Gadavlv~~P~y~~---~~s~~~l~~~f~~va~a~---~lPiilYn~ 130 (286)
T 2r91_A 77 DEAIALAKYAESRGAEAVASLPPYYFP---RLSERQIAKYFRDLCSAV---SIPVFLYNY 130 (286)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSCSST---TCCHHHHHHHHHHHHHHC---SSCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcCCC---CCCHHHHHHHHHHHHHhc---CCCEEEEeC
Confidence 344577888899999999999997532 022456666667787775 579999984
No 191
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=24.02 E-value=1.4e+02 Score=24.38 Aligned_cols=56 Identities=7% Similarity=0.017 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.++ .++..|++-.|-+..|..-+. +..++.++..++. |+ .+.+||-++-
T Consensus 161 d~~~l~~~i~-~~~~~v~l~~p~nptG~~~~~-~~l~~l~~~~~~~----~~-~li~De~~~~ 216 (412)
T 2x5d_A 161 ELERAIRESI-PKPRMMILGFPSNPTAQCVEL-DFFERVVALAKQY----DV-MVVHDLAYAD 216 (412)
T ss_dssp HHHHHHHTEE-SCCSEEEEESSCTTTCCCCCH-HHHHHHHHHHHHH----TC-EEEEECTTTT
T ss_pred CHHHHHHhcc-cCceEEEECCCCCCCCCcCCH-HHHHHHHHHHHHc----CC-EEEEeccccc
Confidence 3466666665 478899999998877876443 4555555544433 33 5678999875
No 192
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=23.90 E-value=2e+02 Score=24.30 Aligned_cols=53 Identities=9% Similarity=0.022 Sum_probs=39.2
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+..++.++|++++--|.--. .+ .+.+.+|-+.+++.. ++||+++|=
T Consensus 116 ~eai~la~~A~~~Gadavlv~~P~Y~~--~s--~~~l~~~f~~VA~a~---~lPiilYn~ 168 (332)
T 2r8w_A 116 DEAVALAKDAEAAGADALLLAPVSYTP--LT--QEEAYHHFAAVAGAT---ALPLAIYNN 168 (332)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCCSSC--CC--HHHHHHHHHHHHHHC---SSCEEEECC
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCC--CC--HHHHHHHHHHHHHhc---CCCEEEEeC
Confidence 344577788899999999999997532 22 356666667788775 579999984
No 193
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=23.84 E-value=2.9e+02 Score=23.58 Aligned_cols=62 Identities=10% Similarity=0.090 Sum_probs=40.4
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCC------CCCC-----HHHHHHHHHHHHHHHHhccCCCcEEEEcCCC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWD------GSET-----PQSNKVRSVAGRLAVRAAERSFSDILITAIF 158 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~md------G~e~-----~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERl 158 (178)
...+.+.+++++.+++.|||=..-.+- |..+ .+++.+.++.++|.....+.+++|++..+-.
T Consensus 139 ~~l~~l~~l~~~~~~~lVVIDsl~~l~~~~e~~g~~gd~~~~~~~r~~~~~lr~L~~~a~~~~~~VI~~nq~~ 211 (366)
T 1xp8_A 139 QALEIMELLVRSGAIDVVVVDSVAALTPRAEIEGDMGDSLPGLQARLMSQALRKLTAILSKTGTAAIFINQVR 211 (366)
T ss_dssp HHHHHHHHHHTTTCCSEEEEECTTTCCCSTTC--------CCHHHHHHHHHHHHHHHHHTTTCCEEEEEEEC-
T ss_pred HHHHHHHHHHhcCCCCEEEEeChHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHHcCCEEEEEEecc
Confidence 345566777777889999986554332 2111 3456677888888776666789999987653
No 194
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=23.80 E-value=1.1e+02 Score=24.74 Aligned_cols=56 Identities=11% Similarity=0.017 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHc--CCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQRE--ETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e~--~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
+.+.|.+.++++ +...+++..|-|..|..-+.. ..++.++..++. | -+..+||-++
T Consensus 159 d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~-~l~~l~~~~~~~----~-~~li~De~~~ 216 (397)
T 3fsl_A 159 RFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTND-QWDAVIEILKAR----E-LIPFLDIAYQ 216 (397)
T ss_dssp CHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHH-HHHHHHHHHHHT----T-CEEEEEESCT
T ss_pred cHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHH-HHHHHHHHHHhC----C-EEEEEecCch
Confidence 578888888764 345677788999888765433 355665555432 3 3677899876
No 195
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=23.59 E-value=2.5e+02 Score=22.89 Aligned_cols=54 Identities=20% Similarity=0.176 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEE
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILI 154 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lv 154 (178)
.++++.+.+.++++|.||++==+-..+..+ .+....|.+.|++. +..++||+++
T Consensus 28 ~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~--~~~~~~~~~~l~~l-~~~~~~v~~v 81 (333)
T 1ii7_A 28 AFKNALEIAVQENVDFILIAGDLFHSSRPS--PGTLKKAIALLQIP-KEHSIPVFAI 81 (333)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCSBSSSSCC--HHHHHHHHHHHHHH-HTTTCCEEEE
T ss_pred HHHHHHHHHHhcCCCEEEECCCcCCCCCCC--HHHHHHHHHHHHHH-HHCCCcEEEe
Confidence 456777888899999888765443233333 23344444444432 2236788887
No 196
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=23.55 E-value=2.2e+02 Score=24.16 Aligned_cols=53 Identities=15% Similarity=0.218 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+..++.++|++++--|.--.. ..+.+.+|-+.+++.. ++||+++|=
T Consensus 113 ~eai~la~~A~~~Gadavlv~~P~Y~~~----s~~~l~~~f~~VA~a~---~lPiilYn~ 165 (343)
T 2v9d_A 113 RETIELSQHAQQAGADGIVVINPYYWKV----SEANLIRYFEQVADSV---TLPVMLYNF 165 (343)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCSSSCC----CHHHHHHHHHHHHHTC---SSCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCC----CHHHHHHHHHHHHHhc---CCCEEEEeC
Confidence 3445778888999999999999975322 2456666667787765 579999984
No 197
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=23.55 E-value=2.5e+02 Score=23.25 Aligned_cols=55 Identities=11% Similarity=0.131 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+..++.++|++++--|.--.+..+ .+.+.+|-+.+++.. ++||+++|=
T Consensus 96 ~~ai~la~~A~~~Gadavlv~~P~y~~~~~s--~~~l~~~f~~ia~a~---~lPiilYn~ 150 (307)
T 3s5o_A 96 QATVEMTVSMAQVGADAAMVVTPCYYRGRMS--SAALIHHYTKVADLS---PIPVVLYSV 150 (307)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCTTGGGCC--HHHHHHHHHHHHHHC---SSCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCCCC--HHHHHHHHHHHHhhc---CCCEEEEeC
Confidence 3445778888999999999999975332222 455666667787775 589999985
No 198
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=23.54 E-value=1.4e+02 Score=25.33 Aligned_cols=62 Identities=10% Similarity=0.022 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCC------CCC-----CHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWD------GSE-----TPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~md------G~e-----~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
..+.+..++++.+++.|||=.+-.+- |.. +.+++.+.++...|....++.|++|+++.+-.+
T Consensus 127 ~l~~~~~l~~~~~~~lIVIDsl~~l~~~~e~~~~~gd~~~~~q~r~~~~~l~~L~~~a~~~~~tVI~inh~~~ 199 (349)
T 2zr9_A 127 ALEIADMLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINELRE 199 (349)
T ss_dssp HHHHHHHHHTTTCCSEEEEECGGGCCCHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTCEEEEEEECC-
T ss_pred HHHHHHHHHhcCCCCEEEEcChHhhcchhhhccccccchhhHHHHHHHHHHHHHHHHHHHhCCEEEEEecccc
Confidence 34455667778889999997775543 221 134556666667776444444789999877553
No 199
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=23.45 E-value=2.2e+02 Score=23.65 Aligned_cols=54 Identities=9% Similarity=0.095 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+.+++.++|++++--|.. .. ..+.+.+|-+.+++..+. ++||+++|=
T Consensus 89 ~~ai~la~~A~~~Gadavlv~~P~~---~~--s~~~l~~~f~~va~a~~~-~lPiilYn~ 142 (313)
T 3dz1_A 89 AAMRRLARLSMDAGAAGVMIAPPPS---LR--TDEQITTYFRQATEAIGD-DVPWVLQDY 142 (313)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCTT---CC--SHHHHHHHHHHHHHHHCT-TSCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCC---CC--CHHHHHHHHHHHHHhCCC-CCcEEEEeC
Confidence 3455778888999999999988873 22 356677777888888731 279999984
No 200
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=23.35 E-value=1.3e+02 Score=21.60 Aligned_cols=55 Identities=7% Similarity=0.076 Sum_probs=36.7
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCC---CCHHHHHHHHHHHHHHHHhccCCCcEEEEc
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGS---ETPQSNKVRSVAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~---e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvD 155 (178)
.....+.+.+...+++.|||-+=.|.-.. .....+.++++++.++++ +.+|+++-
T Consensus 49 ~~~~~~~~~~~~~~pd~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~----~~~vil~~ 106 (190)
T 1ivn_A 49 QGLARLPALLKQHQPRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAA----NAEPLLMQ 106 (190)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHT----TCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHc----CCCEEEEe
Confidence 45567888888889999999888775432 223445555666666543 56788774
No 201
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=23.23 E-value=1.7e+02 Score=23.40 Aligned_cols=50 Identities=8% Similarity=0.091 Sum_probs=31.7
Q ss_pred HHHHHHHHHHH-cCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCchh
Q 030386 98 LELQLLEIAQR-EETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSFS 161 (178)
Q Consensus 98 ~~~~L~~iI~e-~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlSTs 161 (178)
..+.+..++.+ +++|+||+ .| . . .. .....+++. ..|+||+++|-.....
T Consensus 49 ~~~~i~~~i~~~~~vDgiIi-~~-~--~--~~----~~~~~~~~~----~~giPvV~~~~~~~~~ 99 (350)
T 3h75_A 49 TLQQARELFQGRDKPDYLML-VN-E--Q--YV----APQILRLSQ----GSGIKLFIVNSPLTLD 99 (350)
T ss_dssp HHHHHHHHHHSSSCCSEEEE-EC-C--S--SH----HHHHHHHHT----TSCCEEEEEESCCCTT
T ss_pred HHHHHHHHHhcCCCCCEEEE-eC-c--h--hh----HHHHHHHHH----hCCCcEEEEcCCCChH
Confidence 34577788877 89999999 35 2 1 11 122333333 3489999999877653
No 202
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=23.15 E-value=1.7e+02 Score=22.84 Aligned_cols=25 Identities=16% Similarity=0.048 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKS 121 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~ 121 (178)
...+.|.+.++++++|.||+|..-.
T Consensus 76 ~~~~~i~~~a~~~~~dliV~G~~~~ 100 (290)
T 3mt0_A 76 SLHQTIIAEQQAEGCGLIIKQHFPD 100 (290)
T ss_dssp SHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred CHHHHHHHHHHhcCCCEEEEecccC
Confidence 4568899999999999999998743
No 203
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=23.01 E-value=84 Score=25.17 Aligned_cols=55 Identities=13% Similarity=0.065 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.+++ +..|++-.|-+..|..-+.. .+++.++..++. | -...+||-++-
T Consensus 154 d~~~l~~~l~~--~~~v~i~~p~nptG~~~~~~-~l~~i~~~~~~~----~-~~li~De~~~~ 208 (391)
T 4dq6_A 154 DYEDIENKIKD--VKLFILCNPHNPVGRVWTKD-ELKKLGDICLKH----N-VKIISDEIHSD 208 (391)
T ss_dssp CHHHHHHHCTT--EEEEEEESSBTTTTBCCCHH-HHHHHHHHHHHT----T-CEEEEECTTTT
T ss_pred eHHHHHHHhhc--CCEEEEECCCCCCCcCcCHH-HHHHHHHHHHHc----C-CEEEeeccccc
Confidence 56788888876 78888999988888754433 355555544432 3 36778999864
No 204
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=23.01 E-value=2.1e+02 Score=23.43 Aligned_cols=54 Identities=9% Similarity=-0.004 Sum_probs=39.3
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+..++.++|++++--|.--. . +..+.+.+|-+.+++.. ++||+++|=
T Consensus 78 ~~ai~la~~A~~~Gadavlv~~P~y~~-~--~s~~~l~~~f~~va~a~---~lPiilYn~ 131 (288)
T 2nuw_A 78 NDVMELVKFSNEMDILGVSSHSPYYFP-R--LPEKFLAKYYEEIARIS---SHSLYIYNY 131 (288)
T ss_dssp HHHHHHHHHHHTSCCSEEEECCCCSSC-S--CCHHHHHHHHHHHHHHC---CSCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcCCC-C--CCHHHHHHHHHHHHHhc---CCCEEEEEC
Confidence 344577888899999999999997533 0 12456666667788775 579999984
No 205
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=22.79 E-value=50 Score=26.13 Aligned_cols=54 Identities=6% Similarity=0.036 Sum_probs=33.6
Q ss_pred HHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCchh
Q 030386 99 ELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSFS 161 (178)
Q Consensus 99 ~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlSTs 161 (178)
.+.|.+.++ .++..|++-.|-++.|..-+ +++.++..++. .|+ ...+||-+++-
T Consensus 73 ~~~l~~~i~-~~~~~v~~~~~~nptG~~~~----~~~i~~~~~~~---~~~-~li~D~a~~~~ 126 (331)
T 1pff_A 73 PGNIEKHLK-PNTRIVYFETPANPTLKVID----IEDAVKQARKQ---KDI-LVIVDNTFASP 126 (331)
T ss_dssp TTHHHHTCC-TTEEEEEEESSCTTTCCCCC----HHHHHHHHTTS---SSC-EEEEECTTTHH
T ss_pred HHHHHHhhc-CCCeEEEEECCCCCcCcccC----HHHHHHHHhhh---cCC-EEEEECCCccc
Confidence 345555554 35778999999999998776 23332222220 243 56689999854
No 206
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=22.54 E-value=2e+02 Score=23.67 Aligned_cols=54 Identities=7% Similarity=-0.001 Sum_probs=39.2
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+..++.++|++++--|.--. . +..+.+.+|-+.+++.. ++||+++|=
T Consensus 78 ~~ai~la~~A~~~Gadavlv~~P~y~~-~--~s~~~l~~~f~~va~a~---~lPiilYn~ 131 (293)
T 1w3i_A 78 DDAIRLAKLSKDFDIVGIASYAPYYYP-R--MSEKHLVKYFKTLCEVS---PHPVYLYNY 131 (293)
T ss_dssp HHHHHHHHHGGGSCCSEEEEECCCSCS-S--CCHHHHHHHHHHHHHHC---SSCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCC-C--CCHHHHHHHHHHHHhhC---CCCEEEEEC
Confidence 344577788889999999999997533 0 12456666667788775 579999984
No 207
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=22.31 E-value=1.6e+02 Score=23.07 Aligned_cols=53 Identities=11% Similarity=0.076 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHc-CCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQRE-ETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e~-~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
+.+.|.+.+++. ++..|++-.|-+..|..-+. +.+.++ .++ . |+ ...+||-++
T Consensus 118 d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l-~~i~~l---~~~-~---~~-~li~Dea~~ 171 (366)
T 1m32_A 118 DVQAIDAILNADPTISHIAMVHSETTTGMLNPI-DEVGAL---AHR-Y---GK-TYIVDAMSS 171 (366)
T ss_dssp CHHHHHHHHHHCTTCCEEEEESEETTTTEECCH-HHHHHH---HHH-H---TC-EEEEECTTT
T ss_pred CHHHHHHHHhcCCCeEEEEEecccCCcceecCH-HHHHHH---HHH-c---CC-EEEEECCcc
Confidence 567888888875 57888888888888876662 333333 332 2 33 677899986
No 208
>3oby_A Protein pelota homolog; SM fold, hydrolase; 2.90A {Archaeoglobus fulgidus}
Probab=22.30 E-value=3.2e+02 Score=23.48 Aligned_cols=93 Identities=12% Similarity=0.077 Sum_probs=54.5
Q ss_pred eEEEEecCCceEEEEeecCC--cc-----cccEEEEccChhHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHH
Q 030386 64 FSLGVDLGLSRTGLALSKGF--CV-----RPLTVLKLRGEKLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSV 136 (178)
Q Consensus 64 rILgLD~G~KRIGVAiSD~~--~A-----~Pl~tI~~~~~~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~F 136 (178)
-++.+|-|...||+--+.+. .+ .|-.--. ...+.+.++.+.+.++++++||||=|=. .-..|
T Consensus 132 ~~vv~d~g~A~i~~l~~~~~~~~~~i~~~ipkK~g~-~r~~F~~~V~e~~~~~~v~~iIlaGPg~----------~K~~f 200 (352)
T 3oby_A 132 VMLTIEEGYAVAGVLRQWGVEEIFEERMGYGKGMGD-SRKEFFGEVAAKLESFDFKYLIVAGPGF----------AKNDF 200 (352)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEEEEC---------CCCCHHHHHHHHHHHHCCSEEEEECSTT----------HHHHH
T ss_pred EEEEEECCcEEEEEEeCCEEEEEEEEeccCCCccch-hHHHHHHHHHHHHHhcCCCEEEEECCHH----------HHHHH
Confidence 47889999999998776642 11 1111001 1245677888888888999999998832 22334
Q ss_pred HHHHHH---HhccCCCcEEEEcCCCchhhhHHHHHHhhcc
Q 030386 137 AGRLAV---RAAERSFSDILITAIFSFSCHFAIFFTVLNS 173 (178)
Q Consensus 137 a~~L~~---~~~~~glpV~lvDERlSTs~~~a~~~~~~~~ 173 (178)
.+.|.. +++. .|+.+| +++.+.+-+.=++..
T Consensus 201 ~~~l~~~~~~l~~---kvv~v~---~s~gg~~gl~Evl~~ 234 (352)
T 3oby_A 201 LDFLKERYPEMAK---NAVVVD---VSSVGSRGFIEILKR 234 (352)
T ss_dssp HHHHHHHCHHHHT---TEEECC---CCCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhC---cEEEEE---CCCCchhhHHHHHhC
Confidence 444544 2322 577766 334455556555543
No 209
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=22.30 E-value=86 Score=25.37 Aligned_cols=53 Identities=6% Similarity=0.051 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
+.+.|.+.+++.++..|++-.|-+..|..-+ -+.+.+++ ++. |+ ...+||-.+
T Consensus 124 d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~-l~~i~~l~----~~~---~~-~li~D~a~~ 176 (416)
T 3isl_A 124 DPEDIIREIKKVKPKIVAMVHGETSTGRIHP-LKAIGEAC----RTE---DA-LFIVDAVAT 176 (416)
T ss_dssp CHHHHHHHHHHHCCSEEEEESEETTTTEECC-CHHHHHHH----HHT---TC-EEEEECTTT
T ss_pred CHHHHHHHHhhCCCcEEEEEccCCCCceecC-HHHHHHHH----HHc---CC-EEEEECCcc
Confidence 5688899898778999999999999997666 23333332 232 32 677899865
No 210
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=22.22 E-value=1.2e+02 Score=24.42 Aligned_cols=56 Identities=16% Similarity=0.176 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.+++ ++..|++-.|-+..|..-+ ...+++.++..++. |+ ...+||-++-
T Consensus 152 d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~-~~~l~~i~~~~~~~----~~-~li~De~~~~ 207 (388)
T 1j32_A 152 SPEQIRQAITP-KTKLLVFNTPSNPTGMVYT-PDEVRAIAQVAVEA----GL-WVLSDEIYEK 207 (388)
T ss_dssp CHHHHHHHCCT-TEEEEEEESSCTTTCCCCC-HHHHHHHHHHHHHH----TC-EEEEECTTTT
T ss_pred CHHHHHHhcCc-CceEEEEeCCCCCCCcCCC-HHHHHHHHHHHHHc----CC-EEEEEccchh
Confidence 45777777754 5778888999888887643 24556665555443 32 6778998763
No 211
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=22.02 E-value=1.1e+02 Score=26.98 Aligned_cols=18 Identities=17% Similarity=0.178 Sum_probs=16.7
Q ss_pred eEEEEecCCceEEEEeec
Q 030386 64 FSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 64 rILgLD~G~KRIGVAiSD 81 (178)
.+||||+|+..+=+++-|
T Consensus 5 ~~lgIDiGtT~~k~~l~d 22 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYD 22 (503)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred EEEEEEeCCcceEEEEEC
Confidence 689999999999999988
No 212
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=22.02 E-value=32 Score=27.58 Aligned_cols=56 Identities=16% Similarity=0.074 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
+.+.|.+.+++ ++..|++-.|-+..|..-+ -+.+.+++++..++ .|+ ...+||-++
T Consensus 143 d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~-~~~i~~l~~~~~~~---~~~-~li~Dea~~ 198 (390)
T 1elu_A 143 AAAVLANHLGP-KTRLVILSHLLWNTGQVLP-LAEIMAVCRRHQGN---YPV-RVLVDGAQS 198 (390)
T ss_dssp HHHHHHTTCCT-TEEEEEEESBCTTTCCBCC-HHHHHHHHHHCCSS---SCC-EEEEECTTT
T ss_pred hHHHHHHhcCC-CceEEEEeccccCCceecC-HHHHHHHHhhhhhh---cCc-EEEEEcccc
Confidence 45677766653 6788999999999998776 34444443311002 243 677899986
No 213
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=21.86 E-value=1.8e+02 Score=19.33 Aligned_cols=51 Identities=18% Similarity=0.172 Sum_probs=31.3
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCC
Q 030386 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIF 158 (178)
Q Consensus 100 ~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERl 158 (178)
.+..+.+++..++.|++.+-+. +.. -.++++.|++......+||+++-..-
T Consensus 40 ~~a~~~l~~~~~dlvi~d~~l~--~~~------g~~~~~~l~~~~~~~~~~ii~~s~~~ 90 (140)
T 3grc_A 40 AQALEQVARRPYAAMTVDLNLP--DQD------GVSLIRALRRDSRTRDLAIVVVSANA 90 (140)
T ss_dssp HHHHHHHHHSCCSEEEECSCCS--SSC------HHHHHHHHHTSGGGTTCEEEEECTTH
T ss_pred HHHHHHHHhCCCCEEEEeCCCC--CCC------HHHHHHHHHhCcccCCCCEEEEecCC
Confidence 4445566788999999987643 221 13566677762112357888876543
No 214
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=21.80 E-value=1.8e+02 Score=19.13 Aligned_cols=51 Identities=14% Similarity=0.179 Sum_probs=31.7
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCC
Q 030386 100 LQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIF 158 (178)
Q Consensus 100 ~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERl 158 (178)
....+.+++..++.|++.+-+. +.. -..+++.|++.....++||+++-..-
T Consensus 37 ~~a~~~l~~~~~dlvi~d~~l~--~~~------g~~~~~~l~~~~~~~~~pii~~s~~~ 87 (133)
T 3nhm_A 37 ASGLQQALAHPPDVLISDVNMD--GMD------GYALCGHFRSEPTLKHIPVIFVSGYA 87 (133)
T ss_dssp HHHHHHHHHSCCSEEEECSSCS--SSC------HHHHHHHHHHSTTTTTCCEEEEESCC
T ss_pred HHHHHHHhcCCCCEEEEeCCCC--CCC------HHHHHHHHHhCCccCCCCEEEEeCCC
Confidence 3444566778999999987652 221 13566677765222357888876544
No 215
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=21.64 E-value=1.4e+02 Score=23.95 Aligned_cols=56 Identities=11% Similarity=0.093 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.++ .++..|++--|-++.|..-+..+ .++.++..+ +. | -...+||-++.
T Consensus 143 d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~~~~-l~~i~~la~-~~---~-~~li~De~~~~ 198 (375)
T 3op7_A 143 DLEKLRQLIR-PTTKMICINNANNPTGAVMDRTY-LEELVEIAS-EV---G-AYILSDEVYRS 198 (375)
T ss_dssp CHHHHHHHCC-TTCCEEEEESSCTTTCCCCCHHH-HHHHHHHHH-TT---T-CEEEEECCSCC
T ss_pred CHHHHHHhhc-cCCeEEEEcCCCCCCCCCCCHHH-HHHHHHHHH-Hc---C-CEEEEEccccc
Confidence 5678887776 47899999999999997765332 555544433 22 3 26778999875
No 216
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=21.51 E-value=1.9e+02 Score=22.41 Aligned_cols=45 Identities=13% Similarity=0.116 Sum_probs=28.4
Q ss_pred HHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCC
Q 030386 99 ELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIF 158 (178)
Q Consensus 99 ~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERl 158 (178)
...+.+.+.++++|+||+- |...+ . ...+.+++ .|+||+++|...
T Consensus 72 ~~~~~~~l~~~~vdgiIi~-~~~~~---~-------~~~~~l~~----~~iPvV~i~~~~ 116 (305)
T 3huu_A 72 YHEVKTMIQSKSVDGFILL-YSLKD---D-------PIEHLLNE----FKVPYLIVGKSL 116 (305)
T ss_dssp HHHHHHHHHTTCCSEEEES-SCBTT---C-------HHHHHHHH----TTCCEEEESCCC
T ss_pred HHHHHHHHHhCCCCEEEEe-CCcCC---c-------HHHHHHHH----cCCCEEEECCCC
Confidence 3456677778899999983 33221 1 12233432 378999999876
No 217
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=21.44 E-value=2.8e+02 Score=23.13 Aligned_cols=85 Identities=8% Similarity=0.053 Sum_probs=53.4
Q ss_pred ceEEEEecCCceEEEEeecCC--cccccEEEEcc---Ch-----------------hHHHHHHHHHHHcCCCEEE-Eeec
Q 030386 63 GFSLGVDLGLSRTGLALSKGF--CVRPLTVLKLR---GE-----------------KLELQLLEIAQREETDEFI-IGLP 119 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD~~--~A~Pl~tI~~~---~~-----------------~~~~~L~~iI~e~~v~~IV-VGLP 119 (178)
+++-+||.|+-.+=+.|.+.. ...++...+.. +. +.+..+++++++++++.+. ++--
T Consensus 12 m~~a~IDiGSns~rl~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~~~~~v~~i~~vATs 91 (315)
T 1t6c_A 12 MRVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKLIDEFKVERVKAVATE 91 (315)
T ss_dssp EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECH
T ss_pred cEEEEEEECcCcEEEEEEEEcCCcEEEEeeeeEEeecCCCccccCCcCHHHHHHHHHHHHHHHHHHHHCCCCeEEEEEcH
Confidence 478999999999999998821 11222222110 00 1255788889999998554 5432
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 120 KSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 120 l~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
- -..+.....|.+++++.+ |++|..++.
T Consensus 92 A------~R~A~N~~~fl~~v~~~~---G~~i~vIsg 119 (315)
T 1t6c_A 92 A------IRRAKNAEEFLERVKREV---GLVVEVITP 119 (315)
T ss_dssp H------HHTSTTHHHHHHHHHHHT---CCCEEECCH
T ss_pred H------HHcCcCHHHHHHHHHHHH---CCCEEEcCH
Confidence 1 112334568888888876 788887763
No 218
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=21.34 E-value=1.8e+02 Score=23.99 Aligned_cols=56 Identities=9% Similarity=-0.046 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHc--CCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCc
Q 030386 98 LELQLLEIAQRE--ETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFS 159 (178)
Q Consensus 98 ~~~~L~~iI~e~--~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlS 159 (178)
+.+.|.+.++++ +...+++..|-|..|..-+. +..++.++..++. | -+..+||-|+
T Consensus 181 d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~-~~l~~i~~~~~~~----~-~~li~De~y~ 238 (420)
T 4f4e_A 181 NFDGMLAALNGYEPGTIVVLHACCHNPTGVDLND-AQWAQVVEVVKAR----R-LVPFLDIAYQ 238 (420)
T ss_dssp CHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCH-HHHHHHHHHHHHH----T-CEEEEEESCT
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCH-HHHHHHHHHHHHC----C-cEEEEccccc
Confidence 578888888764 35578889999998876543 3355655555443 3 2677899874
No 219
>1nfp_A LUXF gene product; flavin mononucleotide, myristate, flavoprotein; HET: FMN MYR; 1.60A {Photobacterium leiognathi} SCOP: c.1.16.2
Probab=21.32 E-value=1.4e+02 Score=22.82 Aligned_cols=48 Identities=4% Similarity=-0.028 Sum_probs=34.6
Q ss_pred hhHHH-HHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhc
Q 030386 96 EKLEL-QLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAA 145 (178)
Q Consensus 96 ~~~~~-~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~ 145 (178)
+...+ +|.+++++.+++.+++..|-. .....+.+.++.|++++.-+++
T Consensus 175 e~v~~~~l~~~~~~~G~de~~~~~~~~--~~~~~~~~s~el~a~~V~P~~~ 223 (228)
T 1nfp_A 175 DTCLHHVAEMAQGLNNKVDFLFCFESM--KDQENKKSLMINFDKRVINYRK 223 (228)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEECTTC--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEeCCC--CCHHHHHHHHHHHHHhhhhhhh
Confidence 45678 899999999999999976521 1233566678888887776654
No 220
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=21.32 E-value=1.9e+02 Score=24.06 Aligned_cols=53 Identities=11% Similarity=0.140 Sum_probs=38.6
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+..++.++|++++--|.--.. + .+.+.+|-+.+++.. ++||+++|=
T Consensus 94 ~~ai~la~~A~~~Gadavlv~~P~y~~~--s--~~~l~~~f~~va~a~---~lPiilYn~ 146 (306)
T 1o5k_A 94 EKTLKLVKQAEKLGANGVLVVTPYYNKP--T--QEGLYQHYKYISERT---DLGIVVYNV 146 (306)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCCSSCC--C--HHHHHHHHHHHHTTC---SSCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCC--C--HHHHHHHHHHHHHhC---CCCEEEEeC
Confidence 3445777888999999999999975322 2 356666667777654 589999984
No 221
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=21.27 E-value=2.4e+02 Score=23.71 Aligned_cols=54 Identities=7% Similarity=-0.094 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEE
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILI 154 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lv 154 (178)
.++++.+.+.+.++|.||+.==+-..+... .+....|.+.|++.- ..++||+++
T Consensus 48 ~l~~~v~~~~~~~~D~VliaGDl~d~~~p~--~~~~~~~~~~l~~L~-~~~~pv~~v 101 (386)
T 3av0_A 48 SFKLCIKKILEIKPDVVLHSGDLFNDLRPP--VKALRIAMQAFKKLH-ENNIKVYIV 101 (386)
T ss_dssp HHHHHHHHHHTTCCSEEEECSCSBSSSSCC--HHHHHHHHHHHHHHH-HTTCEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCCCCCC--HHHHHHHHHHHHHHH-hcCCcEEEE
Confidence 456777777889999988865443334333 233444444444321 225788886
No 222
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=21.14 E-value=1.2e+02 Score=26.75 Aligned_cols=19 Identities=11% Similarity=0.345 Sum_probs=17.0
Q ss_pred ceEEEEecCCceEEEEeec
Q 030386 63 GFSLGVDLGLSRTGLALSK 81 (178)
Q Consensus 63 ~rILgLD~G~KRIGVAiSD 81 (178)
+.+||||+|+..+=+++-|
T Consensus 5 ~~~lgIDiGtts~k~~l~d 23 (506)
T 3h3n_X 5 NYVMAIDQGTTSSRAIIFD 23 (506)
T ss_dssp CEEEEEEECSSEEEEEEEE
T ss_pred CEEEEEEcCCCceEEEEEC
Confidence 4799999999999888888
No 223
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=21.06 E-value=38 Score=29.05 Aligned_cols=58 Identities=19% Similarity=0.264 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHHc-CCCEEEEeecCCCCCCC--CHHHHHHHHHHHHHHHHhccCCCcEEEE
Q 030386 97 KLELQLLEIAQRE-ETDEFIIGLPKSWDGSE--TPQSNKVRSVAGRLAVRAAERSFSDILI 154 (178)
Q Consensus 97 ~~~~~L~~iI~e~-~v~~IVVGLPl~mdG~e--~~~a~~Vr~Fa~~L~~~~~~~glpV~lv 154 (178)
...+.+.++.+++ +++.|||=+=-.|.+.. ....+.+.++.+.|+...++.++||+.+
T Consensus 142 ~i~~~ir~l~~~~gg~~lIVIDyLqlm~~~~~~~~r~~ei~~isr~LK~lAkel~vpVi~l 202 (338)
T 4a1f_A 142 QIRLQLRKLKSQHKELGIAFIDYLQLMSGSKATKERHEQIAEISRELKTLARELEIPIIAL 202 (338)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEEEEECCCTHHHHHHCCCCHHHHHHHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEechHHhcCCCCCCChHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 3456677777888 89999997665565421 1122335555555555444447899887
No 224
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A*
Probab=20.98 E-value=80 Score=25.66 Aligned_cols=60 Identities=10% Similarity=0.124 Sum_probs=39.7
Q ss_pred HHHHHHHHHHH-cCCCEEEEeecC-----CCC--CCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCC
Q 030386 98 LELQLLEIAQR-EETDEFIIGLPK-----SWD--GSETPQSNKVRSVAGRLAVRAAERSFSDILITAI 157 (178)
Q Consensus 98 ~~~~L~~iI~e-~~v~~IVVGLPl-----~md--G~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDER 157 (178)
.+..+.+++++ .+++.|||=.-- ..+ |+.++..+.+.++...|+....+.++.|++..+-
T Consensus 191 ~l~~l~~~~~~~~~~~lvVIDsl~~l~~~~~~~~~~~~~r~~~~~~~~~~L~~la~~~~~~vi~~nq~ 258 (322)
T 2i1q_A 191 FAEKIEDLIQEGNNIKLVVIDSLTSTFRNEYTGRGKLAERQQKLGRHMATLNKLADLFNCVVLVTNQV 258 (322)
T ss_dssp HHHTHHHHHHTTCEEEEEEEECSSHHHHHHCCCTTSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECE
T ss_pred HHHHHHHHHhhccCccEEEEECcHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHhCCEEEEECce
Confidence 45567788888 788888884211 112 2223344567888888887766678899998664
No 225
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=20.98 E-value=1.7e+02 Score=22.90 Aligned_cols=51 Identities=12% Similarity=0.113 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCC
Q 030386 99 ELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIF 158 (178)
Q Consensus 99 ~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERl 158 (178)
.+.| .++++++|.||+|.. |..+......-..++.+.... .+||..+-+..
T Consensus 114 ~~~I--~a~~~~~DliV~G~~----g~~~~~~~~~Gs~~~~vl~~~---~~PVlvv~~~~ 164 (294)
T 3loq_A 114 VVEI--IKASENYSFIAMGSR----GASKFKKILLGSVSEGVLHDS---KVPVYIFKHDM 164 (294)
T ss_dssp HHHH--HHHHTTSSEEEEECC----CCCHHHHHHHCCHHHHHHHHC---SSCEEEECCCT
T ss_pred hHhe--eeccCCCCEEEEcCC----CCccccceeeccHHHHHHhcC---CCCEEEecCcc
No 226
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=20.94 E-value=58 Score=25.92 Aligned_cols=54 Identities=13% Similarity=0.086 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.++++++..|++-.|-+..|..-+. +++.++ .++. | -...+||-.+.
T Consensus 115 d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l-~~i~~l----~~~~---~-~~li~D~a~~~ 168 (384)
T 3zrp_A 115 KPGEVEEEVRKSEYKLVALTHVETSTGVREPV-KDVINK----IRKY---V-ELIVVDGVSSV 168 (384)
T ss_dssp CHHHHHHHHHHSCEEEEEEESEETTTTEECCH-HHHHHH----HGGG---E-EEEEEECTTTT
T ss_pred CHHHHHHHHHhCCCcEEEEeCCCCCCceECcH-HHHHHH----HHhc---C-CEEEEECcccc
Confidence 57889999998889999999998989977662 223332 2222 3 26778998763
No 227
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=20.83 E-value=1.2e+02 Score=24.94 Aligned_cols=56 Identities=13% Similarity=0.193 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.++ .++..|++-.|-+..|..-+ .+..++.++..++. |+ .+.+||-++-
T Consensus 149 d~~~l~~~l~-~~~~~v~l~~~~nptG~~~~-~~~l~~i~~~~~~~----~~-~li~De~~~~ 204 (411)
T 2o0r_A 149 DADALRRAVT-PRTRALIINSPHNPTGAVLS-ATELAAIAEIAVAA----NL-VVITDEVYEH 204 (411)
T ss_dssp CHHHHHHHCC-TTEEEEEEESSCTTTCCCCC-HHHHHHHHHHHHHT----TC-EEEEECTTTT
T ss_pred CHHHHHHhhc-cCceEEEEeCCCCCCCCCCC-HHHHHHHHHHHHHc----CC-EEEEEccccc
Confidence 4677777775 36778888889888887654 23455555444432 32 6778999873
No 228
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=20.82 E-value=93 Score=25.95 Aligned_cols=57 Identities=14% Similarity=-0.049 Sum_probs=29.1
Q ss_pred HHHHHHHHcCCCEEEEee---cCCCCCC-CCHHHHHHHHHHHHHHHHhccCCCcEEEEcCC
Q 030386 101 QLLEIAQREETDEFIIGL---PKSWDGS-ETPQSNKVRSVAGRLAVRAAERSFSDILITAI 157 (178)
Q Consensus 101 ~L~~iI~e~~v~~IVVGL---Pl~mdG~-e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDER 157 (178)
.+..+....+++.++++- |...+|. .+.-.+.-..+++.|++.+.+.+.+|+++||.
T Consensus 268 ~i~~~~~~~~~~lllLdE~~~p~~~~g~~~sld~~~r~~l~~~l~~l~~~~~~~ililde~ 328 (365)
T 1lw7_A 268 FLDSMIKEYPFDVTILLKNNTEWVDDGLRSLGSQKQRQQFQQLLKKLLDKYKVPYIEIESP 328 (365)
T ss_dssp HHHHHHHHSCCSEEEEEECCCC-----------CCSHHHHHHHHHHHHHGGGCCCEEEECS
T ss_pred HHHHHHhhcCCCEEEECCCCCCcccCCCcCCccHHHHHHHHHHHHHHHHHcCCCEEEeCCC
Confidence 345556667899999887 7643331 11001112245555544433236789999986
No 229
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=20.79 E-value=81 Score=27.24 Aligned_cols=55 Identities=4% Similarity=-0.021 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCchhh
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSFSC 162 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlSTs~ 162 (178)
+.+.|.+.+++ ++..|++--|-|+.|..-+.. ++.+ +.++ .|+.+ .+||.+++-.
T Consensus 156 d~~~l~~ai~~-~t~~v~~e~p~NptG~~~dl~-~i~~----la~~---~g~~l-ivD~a~~~~~ 210 (430)
T 3ri6_A 156 DSLAVEHACDE-TTKLLFLETISNPQLQVADLE-ALSK----VVHA---KGIPL-VVDTTMTPPY 210 (430)
T ss_dssp CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHH-HHHH----HHHT---TTCCE-EEECTTSCTT
T ss_pred CHHHHHHhhCC-CCeEEEEECCCCCCCeecCHH-HHHH----HHHH---cCCEE-EEECCCcccc
Confidence 45666666653 677888888999999877633 2222 2222 35544 5899997643
No 230
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=20.76 E-value=2.3e+02 Score=22.95 Aligned_cols=54 Identities=11% Similarity=-0.012 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCchh
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSFS 161 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlSTs 161 (178)
+.+.|.+.++ .++..|++-.|-+..|..-+. +++.++ .+ +. |+ ...+||-++.-
T Consensus 126 d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l-~~i~~l---~~-~~---~~-~li~De~~~~~ 179 (386)
T 1cs1_A 126 DEQALRAALA-EKPKLVLVESPSNPLLRVVDI-AKICHL---AR-EV---GA-VSVVDNTFLSP 179 (386)
T ss_dssp CHHHHHHHHH-TCCSEEEEECSCTTTCCCCCH-HHHHHH---HH-HT---TC-EEEEECTTTCT
T ss_pred CHHHHHHhhc-cCCcEEEEeCCCCCCCcccCH-HHHHHH---HH-Hc---CC-EEEEECCCccc
Confidence 4577777776 478999999999999987752 333333 22 22 33 67789998744
No 231
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=20.72 E-value=3e+02 Score=21.39 Aligned_cols=59 Identities=7% Similarity=-0.026 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCC--CCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCC
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSW--DGSETPQSNKVRSVAGRLAVRAAERSFSDILITAI 157 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~m--dG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDER 157 (178)
.+.+..++..+-++..||+. +... +....+.-+.+.+..+++.+..++.|+.+.+-...
T Consensus 109 ~~~~~i~~A~~lG~~~v~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~ 169 (295)
T 3cqj_A 109 IMRKAIQFAQDVGIRVIQLA-GYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMD 169 (295)
T ss_dssp HHHHHHHHHHHHTCCEEEEC-CCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEECCS
T ss_pred HHHHHHHHHHHcCCCEEEEC-CCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEeeCC
Confidence 45677778888999998874 2211 11112222333333344444443347777665544
No 232
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=20.62 E-value=1.8e+02 Score=19.26 Aligned_cols=50 Identities=14% Similarity=0.169 Sum_probs=29.9
Q ss_pred HHHHHHHHHcCCCEEEEeecCCCC---CCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCC
Q 030386 100 LQLLEIAQREETDEFIIGLPKSWD---GSETPQSNKVRSVAGRLAVRAAERSFSDILITAI 157 (178)
Q Consensus 100 ~~L~~iI~e~~v~~IVVGLPl~md---G~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDER 157 (178)
....+.+.+..++.+|+.+-+..+ +.. -.++++.|++..+ ++||+++-..
T Consensus 37 ~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~------g~~~~~~l~~~~~--~~~ii~ls~~ 89 (140)
T 2qr3_A 37 VSLSTVLREENPEVVLLDMNFTSGINNGNE------GLFWLHEIKRQYR--DLPVVLFTAY 89 (140)
T ss_dssp HHHHHHHHHSCEEEEEEETTTTC-----CC------HHHHHHHHHHHCT--TCCEEEEEEG
T ss_pred HHHHHHHHcCCCCEEEEeCCcCCCCCCCcc------HHHHHHHHHhhCc--CCCEEEEECC
Confidence 444556677889999999765310 211 1255666766653 4788877443
No 233
>1f07_A Coenzyme F420-dependent N5,N10- methylenetetrahydromethanopterin reductase; (beta, alpha)8 barrel; HET: MPO; 2.00A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.1.16.3
Probab=20.53 E-value=1.7e+02 Score=23.62 Aligned_cols=39 Identities=5% Similarity=0.233 Sum_probs=28.2
Q ss_pred hhHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHH
Q 030386 96 EKLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRL 140 (178)
Q Consensus 96 ~~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L 140 (178)
++..++|.++.+ .++|.++++.|... +..+.++.|++++
T Consensus 280 ~~v~~~l~~~~~-~G~d~~~l~~~~~~-----~~~~~l~~~a~~V 318 (321)
T 1f07_A 280 DEFIPKIEALGE-MGVTQYVAGSPIGP-----DKEKSIKLLGEVI 318 (321)
T ss_dssp HHHHHHHHHHHH-TTCCEEEEEEEECS-----SHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-cCCCEEEEcCCCCc-----cHHHHHHHHHHhh
Confidence 456678888877 89999999887531 2556777777755
No 234
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=20.41 E-value=82 Score=27.48 Aligned_cols=65 Identities=6% Similarity=0.021 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCC-----C--CCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCchhh
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSW-----D--GSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSFSC 162 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~m-----d--G~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlSTs~ 162 (178)
.+..+.+.+.+.+++.|||--|-.+ + |..+++.+.+.++.+.|++..++.|+.|+++..-.++..
T Consensus 261 ~l~~~~~~l~~~~~~llVIDs~t~~~~~~~sg~g~l~~Rq~~l~~il~~L~~lake~gitVIlv~Hv~~~~~ 332 (400)
T 3lda_A 261 LLDAAAQMMSESRFSLIVVDSVMALYRTDFSGRGELSARQMHLAKFMRALQRLADQFGVAVVVTNQVVAQVD 332 (400)
T ss_dssp HHHHHHHHHHHSCEEEEEEETGGGGCC------CCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC-----
T ss_pred HHHHHHHHHHhcCCceEEecchhhhCchhhcCccchHHHHHHHHHHHHHHHHHHHHcCCEEEEEEeecccCC
Confidence 3456677788889999999877543 2 222344555567777776655445889999988765543
No 235
>2fcr_A Flavodoxin; electron transport; HET: FMN; 1.80A {Chondrus crispus} SCOP: c.23.5.1
Probab=20.31 E-value=1e+02 Score=22.69 Aligned_cols=47 Identities=11% Similarity=0.171 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHcCCCEEE--------------------EeecCCCCCCCCHHHHHHHHHHHHHHHHh
Q 030386 98 LELQLLEIAQREETDEFI--------------------IGLPKSWDGSETPQSNKVRSVAGRLAVRA 144 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IV--------------------VGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~ 144 (178)
....|.+.+++.+...+- +|+++..+......-+++++|++.+...+
T Consensus 105 a~~~l~~~l~~~G~~~~~~~~~~g~~~~~s~~~~~~~~~~l~~~~~~~~~~~~~~i~~w~~~i~~~~ 171 (173)
T 2fcr_A 105 AIEEIHDCFAKQGAKPVGFSNPDDYDYEESKSVRDGKFLGLPLDMVNDQIPMEKRVAGWVEAVVSET 171 (173)
T ss_dssp HHHHHHHHHHHTTCEEECCBCGGGSCCSCCTTEETTEESSEEEETTTCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEeecccCCcccccchhhhCCeeeeeeecCCCCccccHHHHHHHHHHHHHHh
Confidence 446777777766654331 25655444344456788999999998765
No 236
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=20.24 E-value=3e+02 Score=21.09 Aligned_cols=56 Identities=18% Similarity=0.087 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHH--cCCCEE-EEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEc
Q 030386 97 KLELQLLEIAQR--EETDEF-IIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILIT 155 (178)
Q Consensus 97 ~~~~~L~~iI~e--~~v~~I-VVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvD 155 (178)
..+++|.+++.+ .++.+| =+|+....+.. +.....+.|...++..- +.|+||.+--
T Consensus 76 ~~~~~l~~~~~~~~~~~~~iGEiGld~~~~~~--~~~~q~~~f~~~~~~a~-~~~~Pv~iH~ 134 (259)
T 1zzm_A 76 VSLEQLQQALERRPAKVVAVGEIGLDLFGDDP--QFERQQWLLDEQLKLAK-RYDLPVILHS 134 (259)
T ss_dssp HHHHHHHHHHHHCCSSEEEEEEEEEECCSSCC--CHHHHHHHHHHHHHHHH-HTTCCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEEEeccCCCCCCC--CHHHHHHHHHHHHHHHH-HhCCcEEEEe
Confidence 346788888877 333343 36888765432 22333444544444332 2378877654
No 237
>1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A
Probab=20.19 E-value=2.1e+02 Score=22.96 Aligned_cols=24 Identities=8% Similarity=0.047 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 131 NKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 131 ~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
+.+.+|-+.+++...+ ..+.|+|=
T Consensus 222 ~~~~~ln~~i~~~A~~--~g~~~vD~ 245 (306)
T 1esc_A 222 QIQKRLNDAMKKAAAD--GGADFVDL 245 (306)
T ss_dssp HHHHHHHHHHHHHHHT--TTCEEECT
T ss_pred HHHHHHHHHHHHHHHH--cCCEEEeC
Confidence 4556666666655543 35778874
No 238
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A*
Probab=20.14 E-value=55 Score=24.36 Aligned_cols=29 Identities=14% Similarity=0.195 Sum_probs=19.9
Q ss_pred EeecCCCCCCCCHHHHHHHHHHHHHHHHh
Q 030386 116 IGLPKSWDGSETPQSNKVRSVAGRLAVRA 144 (178)
Q Consensus 116 VGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~ 144 (178)
+|+|+..+.......+++++|++.|.+.+
T Consensus 139 ~gl~~~~~~~~~~~~~~i~~w~~~i~~~~ 167 (175)
T 1ag9_A 139 VGLAIDEDRQPELTAERVEKWVKQISEEL 167 (175)
T ss_dssp SSEEECTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred EeeecCCCCcccccHHHHHHHHHHHHHHh
Confidence 56665543333345678999999998876
No 239
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=20.12 E-value=1.5e+02 Score=24.35 Aligned_cols=56 Identities=16% Similarity=0.124 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.++ .++..|++-.|-+..|..-+ .+.+++.++..++. |+ ++.+||-++-
T Consensus 171 d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~-~~~l~~i~~~~~~~----~~-~li~De~~~~ 226 (429)
T 1yiz_A 171 DNNELEALFN-EKTKMIIINTPHNPLGKVMD-RAELEVVANLCKKW----NV-LCVSDEVYEH 226 (429)
T ss_dssp CHHHHHHHCC-TTEEEEEEESSCTTTCCCCC-HHHHHHHHHHHHHH----TC-EEEEECTTTT
T ss_pred CHHHHHHHhc-cCceEEEECCCCCCCCccCC-HHHHHHHHHHHHHc----Cc-EEEEeccccc
Confidence 4677777664 46778888889888887654 34566666555443 33 6778999873
No 240
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=20.07 E-value=1.1e+02 Score=26.21 Aligned_cols=56 Identities=4% Similarity=-0.128 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHHcCCCEEEEee----cCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 97 KLELQLLEIAQREETDEFIIGL----PKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGL----Pl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
.+.+.|.+.+++ +...|++-. |-++.|...+ +++.++..++. + .|+ +..+||-+.+
T Consensus 147 ~d~e~l~~ai~~-~tklV~i~~s~g~p~nptg~v~~----l~~I~~la~~~-~-~~~-~livD~a~~~ 206 (409)
T 3jzl_A 147 VDFPRIAKKMTP-KTKMIGIQRSRGYADRPSFTIEK----IKEMIVFVKNI-N-PEV-IVFVDNCYGE 206 (409)
T ss_dssp CCHHHHHHHCCT-TEEEEEEECSCTTSSSCCCCHHH----HHHHHHHHHHH-C-TTC-EEEEECTTCT
T ss_pred cCHHHHHHhccC-CCeEEEEECCCCCCCCCcCcccc----HHHHHHHHHhh-C-CCC-EEEEeCCccc
Confidence 356777777754 577888887 9999988543 44444444331 0 133 5669998864
No 241
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=20.07 E-value=3.3e+02 Score=22.31 Aligned_cols=57 Identities=4% Similarity=0.015 Sum_probs=40.0
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITA 156 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDE 156 (178)
...-++.+..++.++|++++--|.--. .. ..+.+.+|-+.+++..+..++||+++|=
T Consensus 85 ~~ai~la~~A~~~Gadavlv~~P~y~~-~~--s~~~l~~~f~~va~a~p~~~lPiilYn~ 141 (294)
T 3b4u_A 85 EDAADQSAEALNAGARNILLAPPSYFK-NV--SDDGLFAWFSAVFSKIGKDARDILVYNI 141 (294)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCSSC-SC--CHHHHHHHHHHHHHHHCTTCCCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcCCC-CC--CHHHHHHHHHHHHHhcCCCCCcEEEEEC
Confidence 344577888899999999999997533 01 2456666767788776311379999984
No 242
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=20.06 E-value=3.4e+02 Score=22.51 Aligned_cols=57 Identities=9% Similarity=-0.087 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCC
Q 030386 97 KLELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAI 157 (178)
Q Consensus 97 ~~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDER 157 (178)
...-++.+..++.++|++++--|+.-.. ..+..+.+.+|-+.+++.. ++||+++|=-
T Consensus 90 ~~ai~la~~A~~~Gadavlv~~Pyy~~~-~~~s~~~l~~~f~~va~a~---~lPiilYn~P 146 (309)
T 3fkr_A 90 QVCAARSLRAQQLGAAMVMAMPPYHGAT-FRVPEAQIFEFYARVSDAI---AIPIMVQDAP 146 (309)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSCBTTT-BCCCHHHHHHHHHHHHHHC---SSCEEEEECG
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCccC-CCCCHHHHHHHHHHHHHhc---CCCEEEEeCC
Confidence 3455778888999999999999964110 1123455666667788775 5899999964
No 243
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=20.05 E-value=1.2e+02 Score=24.33 Aligned_cols=56 Identities=13% Similarity=0.156 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.+++ ++..|++-.|-+..|..-+ .+.+++.++..++. | -...+||-++-
T Consensus 149 d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~-~~~l~~l~~~~~~~----~-~~li~De~~~~ 204 (389)
T 1gd9_A 149 NVDELKKYVTD-KTRALIINSPCNPTGAVLT-KKDLEEIADFVVEH----D-LIVISDEVYEH 204 (389)
T ss_dssp CHHHHHHHCCT-TEEEEEEESSCTTTCCCCC-HHHHHHHHHHHHHT----T-CEEEEECTTTT
T ss_pred CHHHHHHhcCc-CceEEEEECCCCCCCcCCC-HHHHHHHHHHHHHc----C-CEEEEehhhhh
Confidence 46778777764 6778888888887787643 23555555544432 3 26788999874
No 244
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=20.01 E-value=1.1e+02 Score=24.81 Aligned_cols=59 Identities=17% Similarity=0.142 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCCCCHHHHHHHHHHHHHHH---HhccCCCcEEEEcCCCch
Q 030386 98 LELQLLEIAQREETDEFIIGLPKSWDGSETPQSNKVRSVAGRLAV---RAAERSFSDILITAIFSF 160 (178)
Q Consensus 98 ~~~~L~~iI~e~~v~~IVVGLPl~mdG~e~~~a~~Vr~Fa~~L~~---~~~~~glpV~lvDERlST 160 (178)
+.+.|.+.+++ ++..+++-.|-+..|..-+..+ +++.++..++ .+. .|+ ...+||-++-
T Consensus 161 d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~-l~~l~~~~~~~~~~~~-~~~-~li~De~~~~ 222 (398)
T 3ele_A 161 DFDALEERINA-HTRGVIINSPNNPSGTVYSEET-IKKLSDLLEKKSKEIG-RPI-FIIADEPYRE 222 (398)
T ss_dssp CHHHHHHTCCT-TEEEEEECSSCTTTCCCCCHHH-HHHHHHHHHHHHHHHT-SCC-EEEEECTTTT
T ss_pred CHHHHHHHhCc-CCCEEEEcCCCCCCCCCCCHHH-HHHHHHHHHhhhhccC-CCe-EEEEeccccc
Confidence 56777777754 6888999899888887665433 5555554443 221 122 5678998864
Done!