BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030388
(178 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255577161|ref|XP_002529464.1| conserved hypothetical protein [Ricinus communis]
gi|223531080|gb|EEF32930.1| conserved hypothetical protein [Ricinus communis]
Length = 68
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 65/69 (94%), Gaps = 1/69 (1%)
Query: 110 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 169
MKKG+HPQMQWISYVTQSGRLMH+MMTKIH+VGKVYHFRARRQ+A+S+GQVAKF+RRY Q
Sbjct: 1 MKKGIHPQMQWISYVTQSGRLMHIMMTKIHHVGKVYHFRARRQLAESLGQVAKFKRRYGQ 60
Query: 170 QLDAENNEK 178
+ DAE+ K
Sbjct: 61 E-DAEDTAK 68
>gi|224060393|ref|XP_002300177.1| predicted protein [Populus trichocarpa]
gi|222847435|gb|EEE84982.1| predicted protein [Populus trichocarpa]
Length = 68
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/69 (76%), Positives = 63/69 (91%), Gaps = 1/69 (1%)
Query: 110 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 169
MKKG+HPQMQWISYVTQ GRLMH MMTKIH+VG VYHFRA+RQMA+S+GQ+AKF+RRY Q
Sbjct: 1 MKKGIHPQMQWISYVTQDGRLMHAMMTKIHHVGNVYHFRAKRQMAESLGQIAKFKRRYGQ 60
Query: 170 QLDAENNEK 178
+ +AE+ EK
Sbjct: 61 E-NAEDAEK 68
>gi|77551136|gb|ABA93933.1| hypothetical protein LOC_Os11g31650 [Oryza sativa Japonica Group]
Length = 143
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 63/70 (90%), Gaps = 1/70 (1%)
Query: 109 KMKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYE 168
+MKKGLHPQMQWISYVTQSGRL+++MMTK+++ GKVYH RA+RQMAQS+GQ+AKF RRY+
Sbjct: 75 RMKKGLHPQMQWISYVTQSGRLINIMMTKVNHTGKVYHMRAKRQMAQSLGQIAKFNRRYQ 134
Query: 169 QQLDAENNEK 178
Q+ EN EK
Sbjct: 135 QE-SEENKEK 143
>gi|222616045|gb|EEE52177.1| hypothetical protein OsJ_34043 [Oryza sativa Japonica Group]
Length = 109
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 99 RNSVLGHY--LEKMKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQS 156
++S HY + +MKKGLHPQMQWISYVTQSGRL+++MMTK+++ GKVYH RA+RQMAQS
Sbjct: 29 KSSRWNHYTWVVRMKKGLHPQMQWISYVTQSGRLINIMMTKVNHTGKVYHMRAKRQMAQS 88
Query: 157 IGQVAKFRRRYEQQLDAENNEK 178
+GQ+AKF RRY+Q+ + EN EK
Sbjct: 89 LGQIAKFNRRYQQESE-ENKEK 109
>gi|186532211|ref|NP_001119440.1| Ribosomal protein L31 [Arabidopsis thaliana]
gi|186532215|ref|NP_001119441.1| Ribosomal protein L31 [Arabidopsis thaliana]
gi|297792983|ref|XP_002864376.1| hypothetical protein ARALYDRAFT_918652 [Arabidopsis lyrata subsp.
lyrata]
gi|98962143|gb|ABF59401.1| unknown protein [Arabidopsis thaliana]
gi|297310211|gb|EFH40635.1| hypothetical protein ARALYDRAFT_918652 [Arabidopsis lyrata subsp.
lyrata]
gi|332009201|gb|AED96584.1| Ribosomal protein L31 [Arabidopsis thaliana]
gi|332009202|gb|AED96585.1| Ribosomal protein L31 [Arabidopsis thaliana]
Length = 76
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/58 (87%), Positives = 57/58 (98%)
Query: 110 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRY 167
MKKGLHPQMQWISYVTQSGRLMHVMMT+IH+VGKVYHF A+RQMAQSIGQ+AKF+RR+
Sbjct: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTRIHHVGKVYHFGAKRQMAQSIGQIAKFKRRF 58
>gi|116830209|gb|ABK28062.1| unknown [Arabidopsis thaliana]
Length = 77
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/58 (87%), Positives = 57/58 (98%)
Query: 110 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRY 167
MKKGLHPQMQWISYVTQSGRLMHVMMT+IH+VGKVYHF A+RQMAQSIGQ+AKF+RR+
Sbjct: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTRIHHVGKVYHFGAKRQMAQSIGQIAKFKRRF 58
>gi|218185821|gb|EEC68248.1| hypothetical protein OsI_36268 [Oryza sativa Indica Group]
Length = 109
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 69/81 (85%), Gaps = 3/81 (3%)
Query: 99 RNSVLGHY--LEKMKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQS 156
++S HY + +MKKGLHPQMQWISYVTQSGRL+++MMTK+++ GKVYH RA+RQMAQS
Sbjct: 29 KSSRWNHYTWVVRMKKGLHPQMQWISYVTQSGRLINIMMTKVNHTGKVYHMRAKRQMAQS 88
Query: 157 IGQVAKFRRRYEQQLDAENNE 177
+GQ+AKF RRY+Q+ + EN E
Sbjct: 89 LGQIAKFNRRYQQESE-ENKE 108
>gi|215694508|dbj|BAG89501.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701402|dbj|BAG92826.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 68
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/69 (73%), Positives = 63/69 (91%), Gaps = 1/69 (1%)
Query: 110 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 169
MKKGLHPQMQWISYVTQSGRL+++MMTK+++ GKVYH RA+RQMAQS+GQ+AKF RRY+Q
Sbjct: 1 MKKGLHPQMQWISYVTQSGRLINIMMTKVNHTGKVYHMRAKRQMAQSLGQIAKFNRRYQQ 60
Query: 170 QLDAENNEK 178
+ + EN EK
Sbjct: 61 ESE-ENKEK 68
>gi|357156679|ref|XP_003577539.1| PREDICTED: uncharacterized protein LOC100838519 isoform 2
[Brachypodium distachyon]
Length = 68
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 62/68 (91%)
Query: 110 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 169
M+KGLHPQMQWISYVTQSGRL+++MMTK+++ GKVYH RA+RQMAQS+GQ+AKF+RRYEQ
Sbjct: 1 MRKGLHPQMQWISYVTQSGRLINIMMTKVNHTGKVYHMRAKRQMAQSLGQIAKFKRRYEQ 60
Query: 170 QLDAENNE 177
+ + ++
Sbjct: 61 EAEESKDK 68
>gi|195641006|gb|ACG39971.1| hypothetical protein [Zea mays]
gi|413920925|gb|AFW60857.1| hypothetical protein ZEAMMB73_243654 [Zea mays]
Length = 68
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 62/68 (91%)
Query: 110 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 169
M+KGLHPQMQWISYVTQSGRL+++MMTK+++ GKVYH RA+RQMAQS+GQ+AKF+RRYEQ
Sbjct: 1 MRKGLHPQMQWISYVTQSGRLINIMMTKVNHTGKVYHMRAKRQMAQSLGQIAKFKRRYEQ 60
Query: 170 QLDAENNE 177
+ + ++
Sbjct: 61 EAEKSKDK 68
>gi|357446801|ref|XP_003593676.1| hypothetical protein MTR_2g014910 [Medicago truncatula]
gi|355482724|gb|AES63927.1| hypothetical protein MTR_2g014910 [Medicago truncatula]
Length = 81
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 56/58 (96%)
Query: 110 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRY 167
MKKG+HPQ QWISYVTQSGRL+HVMMTKIH VGKVYHFRA+RQMA+S+GQ+AKF+RR+
Sbjct: 1 MKKGVHPQKQWISYVTQSGRLLHVMMTKIHPVGKVYHFRAKRQMAESLGQIAKFKRRF 58
>gi|195610630|gb|ACG27145.1| hypothetical protein [Zea mays]
Length = 68
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/61 (77%), Positives = 59/61 (96%)
Query: 110 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 169
M+KGLHPQMQWISYVTQSGRL+++MMTK+++ GKVYH RA+RQMAQS+GQ+AKF+RRYEQ
Sbjct: 1 MRKGLHPQMQWISYVTQSGRLINIMMTKVNHTGKVYHMRAKRQMAQSLGQIAKFKRRYEQ 60
Query: 170 Q 170
+
Sbjct: 61 E 61
>gi|242086801|ref|XP_002439233.1| hypothetical protein SORBIDRAFT_09g002780 [Sorghum bicolor]
gi|241944518|gb|EES17663.1| hypothetical protein SORBIDRAFT_09g002780 [Sorghum bicolor]
Length = 68
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 58/60 (96%)
Query: 110 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 169
M+KGLHPQMQWISYVTQSGRL+++MMTK+++ GKVYH RA+RQMAQS+GQ+AKF+RRYEQ
Sbjct: 1 MRKGLHPQMQWISYVTQSGRLINIMMTKVNHTGKVYHMRAKRQMAQSLGQIAKFKRRYEQ 60
>gi|195628566|gb|ACG36113.1| hypothetical protein [Zea mays]
gi|414591433|tpg|DAA42004.1| TPA: hypothetical protein ZEAMMB73_746475 [Zea mays]
Length = 68
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 47/61 (77%), Positives = 58/61 (95%)
Query: 110 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 169
M+KGLHPQMQWISYVTQSGRL++ MMTK+++ GKVYH RA+RQMAQS+GQ+AKF+RRYEQ
Sbjct: 1 MRKGLHPQMQWISYVTQSGRLINTMMTKVNHTGKVYHMRAKRQMAQSLGQIAKFKRRYEQ 60
Query: 170 Q 170
+
Sbjct: 61 E 61
>gi|357446807|ref|XP_003593679.1| hypothetical protein MTR_2g014940 [Medicago truncatula]
gi|355482727|gb|AES63930.1| hypothetical protein MTR_2g014940 [Medicago truncatula]
gi|388490718|gb|AFK33425.1| unknown [Medicago truncatula]
Length = 79
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 56/58 (96%)
Query: 110 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRY 167
MKKG+HPQ QWISYVTQSGRL+HVMMTKIH VGKVYHFRA+RQMA+S+GQ+AKF+RR+
Sbjct: 1 MKKGVHPQKQWISYVTQSGRLLHVMMTKIHPVGKVYHFRAKRQMAESLGQIAKFKRRF 58
>gi|388518627|gb|AFK47375.1| unknown [Lotus japonicus]
Length = 68
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 55/58 (94%)
Query: 110 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRY 167
MKKG+HPQ QWISYVTQ+GRLMHVMM KIH VGKVYHFRA+RQMA+S+GQ+AKFRRR+
Sbjct: 1 MKKGVHPQKQWISYVTQTGRLMHVMMAKIHPVGKVYHFRAKRQMAESLGQIAKFRRRF 58
>gi|449443081|ref|XP_004139309.1| PREDICTED: uncharacterized protein LOC101220819 [Cucumis sativus]
Length = 78
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 57/70 (81%), Gaps = 2/70 (2%)
Query: 110 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 169
MKKGLHPQ+Q++SYVT SGRLM MMTK HNV KVYH RA+RQM +SIGQ+AKFRRRYE
Sbjct: 1 MKKGLHPQLQYVSYVTPSGRLMSAMMTKAHNVSKVYHLRAKRQMIESIGQLAKFRRRYEM 60
Query: 170 QLD--AENNE 177
D A+N E
Sbjct: 61 GNDENADNAE 70
>gi|222617070|gb|EEE53202.1| hypothetical protein OsJ_36078 [Oryza sativa Japonica Group]
Length = 68
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 36/43 (83%), Gaps = 2/43 (4%)
Query: 134 MMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQQLDAENN 176
MMTKI + GKV+H RA+ +MAQS+GQ+AKF+RRYE L+AE N
Sbjct: 1 MMTKISHTGKVHHMRAKHRMAQSLGQIAKFKRRYE--LEAEEN 41
>gi|77555445|gb|ABA98241.1| hypothetical protein LOC_Os12g29470 [Oryza sativa Japonica Group]
Length = 94
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 35/42 (83%), Gaps = 2/42 (4%)
Query: 135 MTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQQLDAENN 176
MTKI + GKV+H RA+ +MAQS+GQ+AKF+RRYE L+AE N
Sbjct: 1 MTKISHTGKVHHMRAKHRMAQSLGQIAKFKRRYE--LEAEEN 40
>gi|224108193|ref|XP_002314754.1| predicted protein [Populus trichocarpa]
gi|222863794|gb|EEF00925.1| predicted protein [Populus trichocarpa]
Length = 1135
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 4 PNKGPLKTYGSQQ--SKPGLASSPTPASFPLNFSHLSNKPPSISGRRRKPLAAVTWLPKS 61
P +G L T + Q + PGL P N SH ++ PPS GR + AA +W S
Sbjct: 699 PQRGQLSTLPATQYANNPGLCGVPLTPCGSGN-SHTASNPPSDGGRGGRKTAAASW-ANS 756
Query: 62 PVFSLF---AGTCVLILFSIG 79
V + A C+LI+++I
Sbjct: 757 IVLGILISIASLCILIVWAIA 777
>gi|224119658|ref|XP_002331214.1| predicted protein [Populus trichocarpa]
gi|222873335|gb|EEF10466.1| predicted protein [Populus trichocarpa]
Length = 986
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 25 PTPASFPLNFSHLSNKPPSI---SGRRRKPLAAVTWLPKSPVFSLFAGTCVLILFSIGTY 81
P P+ P SNKPP+ + + +KP++ T PK P+ SL AG ++G +
Sbjct: 68 PPPSQKPHLDKKTSNKPPTFRNKNDKSQKPISKPT--PKPPILSLDAG-------AVGVW 118
Query: 82 YYELHVRSSLKTFRQRLRNSVLGHYLEKMKKGLHPQM---QWISYVTQSGRLMHVMM 135
+ +L L N VLG E+ K L +M +W S+V + L +M
Sbjct: 119 HVDL----------MELENKVLG---EESKGKLEVKMGVGEWKSFVEKKRELGERLM 162
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.133 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,838,507,664
Number of Sequences: 23463169
Number of extensions: 111381005
Number of successful extensions: 284466
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 284442
Number of HSP's gapped (non-prelim): 36
length of query: 178
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 45
effective length of database: 9,238,593,890
effective search space: 415736725050
effective search space used: 415736725050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)