BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030390
(178 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B6SGC5|CNR6_MAIZE Cell number regulator 6 OS=Zea mays GN=CNR6 PE=2 SV=1
Length = 239
Score = 250 bits (638), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 114/163 (69%), Positives = 131/163 (80%)
Query: 2 AEGGGNSRYVKLTKEQTPVEDDIKPGELNQPIEVPQLNVHRCNECGQPLPEDFEPPADEP 61
A SRYVKLTK+Q +DI+PGELNQP+ VPQL RC+ECGQ LPE +EPPADEP
Sbjct: 5 ATSSHPSRYVKLTKDQDAPAEDIRPGELNQPVHVPQLEGRRCSECGQVLPESYEPPADEP 64
Query: 62 WTTGIFGCTEDTESCWTGFFCPCVLFGRNVEKMREDTPWTHPCICHAVCIEGGVALAAAT 121
WTTGIFGCT+D E+C TG FCPCVLFGRNVE +RED PWT PC+CHAV +EGG+ LA T
Sbjct: 65 WTTGIFGCTDDPETCRTGLFCPCVLFGRNVEAVREDIPWTTPCVCHAVFVEGGITLAILT 124
Query: 122 AVFHGIDPRTSFLICEGLFFAWWMCGIYTGNLRQNLQKKYHLK 164
A+FHG+DPRTSFLI EGL F+WW+C YTG RQ LQ+KYHLK
Sbjct: 125 AIFHGVDPRTSFLIGEGLVFSWWLCATYTGIFRQGLQRKYHLK 167
>sp|Q8S8T8|PCR10_ARATH Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana
GN=PCR10 PE=2 SV=1
Length = 190
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 15/121 (12%)
Query: 55 EPPADEP--WTTGIFGCTEDTESCWTGFFCPCVLFGRNVEKMREDTPWTHPCICHAVCIE 112
E D+P W++GI C +D +SC G FCPC +FG+N E + T + PC+ H CI
Sbjct: 38 ESTKDDPRQWSSGICACFDDMQSCCVGLFCPCYIFGKNAELLGSGT-FAGPCLTH--CIS 94
Query: 113 GGVALAAATAVFHGIDPRTSFLICEGLFFAWWMCGIYTGNLRQNLQKKYHLKVINLLEFI 172
+ +G + L G F + + CG R++L+ KY+L+ +F+
Sbjct: 95 WALVNTICCFATNG-----ALLGLPGCFVSCYACG-----YRKSLRAKYNLQEAPCGDFV 144
Query: 173 T 173
T
Sbjct: 145 T 145
>sp|B4FF80|CNR5_MAIZE Cell number regulator 5 OS=Zea mays GN=CNR5 PE=2 SV=1
Length = 184
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 62 WTTGIFGCTEDTESCWTGFFCPCVLFGRNVEKMREDTPWTHPCICHAVCIEGGVALAAAT 121
W++GI C +D +SC G CPC LFG+N + + T C H C+ G+ L +
Sbjct: 45 WSSGICACFDDPQSCCIGAICPCFLFGKNAQFLGSGT-LAGSCTTH--CMLWGL-LTSLC 100
Query: 122 AVFHGIDPRTSFLICEGLFFAWWMCGIYTGNLRQNLQKKYHL 163
VF G L G A + CG R L+ KY+L
Sbjct: 101 CVFTG----GLVLAVPGSAVACYACG-----YRSALRTKYNL 133
>sp|D9HP20|CNR4_MAIZE Cell number regulator 4 OS=Zea mays GN=CNR4 PE=2 SV=1
Length = 159
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 52 EDFEPPADEPWTTGIFGCTEDTESCWTGFFCPCVLFGRNVEKM 94
+ PP E WTTG+ GC D +SC F CPC+ FG+ E +
Sbjct: 2 STYPPPTGE-WTTGLCGCFSDCKSCCLSFLCPCIPFGQVAEVL 43
>sp|Q9LS43|PCR7_ARATH Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana
GN=PCR7 PE=2 SV=1
Length = 133
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 59 DEPWTTGIFGCTEDTESCWTGFFCPCVLFGR 89
++ WT+G+F C ED+E+ FCPCV FGR
Sbjct: 2 EKQWTSGLFSCMEDSETACLTCFCPCVTFGR 32
>sp|Q9LQU4|PCR2_ARATH Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana
GN=PCR2 PE=1 SV=1
Length = 152
Score = 37.7 bits (86), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 55 EPPADEPWTTGIFGCTEDTESCWTGFFCPCVLFGRNVE 92
+P A+ W+TG C D ++C F+CPC+ FG+ E
Sbjct: 9 KPHAEGEWSTGFCDCFSDCKNCCITFWCPCITFGQVAE 46
>sp|B4FUS3|CNR8_MAIZE Cell number regulator 8 OS=Zea mays GN=CNR8 PE=2 SV=1
Length = 233
Score = 36.6 bits (83), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 8/43 (18%)
Query: 60 EPWTTGIFGC--------TEDTESCWTGFFCPCVLFGRNVEKM 94
E W +GI C + D E C G PCVL+G NVE++
Sbjct: 62 ESWNSGILSCLGRNDEFCSSDVEVCLLGTVAPCVLYGSNVERL 104
>sp|Q9M815|PCR8_ARATH Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis thaliana
GN=PCR8 PE=1 SV=2
Length = 190
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 21/91 (23%)
Query: 18 TPVEDDI-------KPGELNQPIEVPQLNVHRCNECGQPLPEDFEP-----PADEPWTTG 65
TP E+D +PG NQ VP Q P +++ PW+TG
Sbjct: 6 TPSEEDSNNGLPVQQPGTPNQRTRVP---------VSQFAPPNYQQANVNLSVGRPWSTG 56
Query: 66 IFGCTEDTESCWTGFFCPCVLFGRNVEKMRE 96
+F C D + PCV FG+ E M E
Sbjct: 57 LFDCQADQANAVLTTIVPCVTFGQIAEVMDE 87
>sp|B6TZ45|CNR1_MAIZE Cell number regulator 1 OS=Zea mays GN=CNR1 PE=2 SV=1
Length = 191
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 62 WTTGIFGCTEDTESCWTGFFCPCVLFGRNVEKMREDTPWTHPCI 105
W+TG+F C +D +C CPCV FG+ + + + T PCI
Sbjct: 51 WSTGLFHCMDDPGNCLITCLCPCVTFGQVADIVDKG---TCPCI 91
>sp|P0CW98|PCR9_ARATH Protein PLANT CADMIUM RESISTANCE 9 OS=Arabidopsis thaliana
GN=PCR9 PE=3 SV=1
Length = 148
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 62 WTTGIFGC-TEDTESCWTGFFCPCVLFGRNVE 92
WTTG++ C +ED +C + CPCV FGR E
Sbjct: 17 WTTGLYDCLSEDISTCCFTWVCPCVAFGRIAE 48
>sp|D9HP27|CNR11_MAIZE Cell number regulator 11 OS=Zea mays GN=CNR11 PE=2 SV=1
Length = 158
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 52 EDFEPPADEP----WTTGIFGCTEDTESCWTGFFCPCVLFGRNVE 92
E P AD+ W+ G+ C D +C +CPCV FGR E
Sbjct: 27 EALSPLADQSMPGEWSVGLCDCFGDLHTCCLTLWCPCVTFGRTAE 71
>sp|D9HP23|CNR7_MAIZE Cell number regulator 7 OS=Zea mays GN=CNR7 PE=2 SV=1
Length = 180
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 44/117 (37%), Gaps = 26/117 (22%)
Query: 47 GQPLPEDFEPPADEPWTTGIFGCTEDTESCWTGFFCPCVLFGRNVEKMREDTPWTHPCIC 106
G P+ A W++G+ C +D C +CPCV FGR E
Sbjct: 25 GIPISSPGPAVAASQWSSGLCACFDDCGLCCMTCWCPCVTFGRIAE-------------- 70
Query: 107 HAVCIEGGVALAAATAVFHGIDPRTSFLICEGLFFAWWMCGIYTGNLRQNLQKKYHL 163
V G + AAA A++ + L C F W IY+ R ++ + L
Sbjct: 71 --VVDRGATSCAAAGAIY-------TLLACFTGFQCHW---IYSCTYRSKMRAQLGL 115
>sp|Q9LQU2|PCR1_ARATH Protein PLANT CADMIUM RESISTANCE 1 OS=Arabidopsis thaliana GN=PCR1
PE=1 SV=1
Length = 151
Score = 35.0 bits (79), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 24/106 (22%)
Query: 55 EPPADEPWTTGIFGCTEDTESCWTGFFCPCVLFGRNVEKMREDTPWTHPCICHAVCIEGG 114
+P A W+TG C D +C CPC+ FG+ E + G
Sbjct: 8 KPHAQGEWSTGFCDCFSDCRNCCITLCCPCITFGQVAE----------------IVDRGS 51
Query: 115 VALAAATAVFHGIDPRTSFLICEGLFFAWWMCGIYTGNLRQNLQKK 160
+ AA A++ ID TS G +A + Y+G +R K
Sbjct: 52 KSCCAAGALYMLIDLITSC----GRMYACF----YSGKMRAQYNIK 89
>sp|P0CW97|PCR3_ARATH Protein PLANT CADMIUM RESISTANCE 3 OS=Arabidopsis thaliana
GN=PCR3 PE=3 SV=1
Length = 152
Score = 34.3 bits (77), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 55 EPPADEPWTTGIFGCTEDTESCWTGFFCPCVLFGR 89
P A+ W+TG C D ++C + CPC+ FG+
Sbjct: 9 NPHAEGEWSTGFCDCFSDCQNCCITWLCPCITFGQ 43
>sp|D9HP26|CNR10_MAIZE Cell number regulator 10 OS=Zea mays GN=CNR10 PE=2 SV=1
Length = 157
Score = 34.3 bits (77), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 56 PPADEPWTTGIFGCTEDTESCWTGFFCPCVLFGRNVE 92
P A W++G+ C +D C +CPC+ FGR E
Sbjct: 25 PAASSQWSSGLLDCFDDCGLCCLTCWCPCITFGRVAE 61
>sp|Q9SX26|PCR12_ARATH Protein PLANT CADMIUM RESISTANCE 12 OS=Arabidopsis thaliana
GN=PCR12 PE=2 SV=2
Length = 161
Score = 34.3 bits (77), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 62 WTTGIFGCTEDTESCWTGFFCPCVLFGRNVEKMREDT 98
WTTG+ C ED C PCV F +NVE + T
Sbjct: 29 WTTGLCDCHEDAHICVQTAIMPCVSFAQNVEIVNRGT 65
>sp|D9HP19|CNR3_MAIZE Cell number regulator 3 OS=Zea mays GN=CNR3 PE=2 SV=1
Length = 167
Score = 33.5 bits (75), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 62 WTTGIFGCTEDTESCWTGFFCPCVLFGRNVE 92
W++ + C +D + C F+CPC+ FGR E
Sbjct: 32 WSSRLLDCFDDFDICCMTFWCPCITFGRTAE 62
>sp|B6TYV8|CNR2_MAIZE Cell number regulator 2 OS=Zea mays GN=CNR2 PE=2 SV=1
Length = 181
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 62 WTTGIFGCTEDTESCWTGFFCPCVLFGRNVE 92
W+TG+ C +D +C CPC+ FG+ E
Sbjct: 47 WSTGLCNCFDDCHNCCVTCVCPCITFGQTAE 77
>sp|D9HP25|CNR9_MAIZE Cell number regulator 9 OS=Zea mays GN=CNR9 PE=2 SV=1
Length = 175
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 57 PADEPWTTGIFGCTEDTESCWTGFFCPCVLFGRNVE 92
P W++G+ C++D C +CPC+ FGR E
Sbjct: 36 PVVGKWSSGLCACSDDCGLCCLTCWCPCITFGRIAE 71
>sp|Q9LS45|PCR5_ARATH Protein PLANT CADMIUM RESISTANCE 5 OS=Arabidopsis thaliana GN=PCR5
PE=2 SV=1
Length = 184
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 50 LPEDFEPPADEPWTTGIFGCTEDTESCWTGFFCPCVLFGRNVEKMREDTPWTHPCICHAV 109
+P +++ ++ W++ +F C D+E+ PCV FG+ E + E PC A
Sbjct: 41 IPVNYQQTQNQ-WSSQLFDCMNDSENAVITLIAPCVTFGQIAEIVDEG---ATPCAT-AG 95
Query: 110 CIEGGVALAAATAVF 124
+ G + A+ V+
Sbjct: 96 LLYGALFFTGASFVY 110
>sp|B8D6X1|RIBB_BUCAT 3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Buchnera
aphidicola subsp. Acyrthosiphon pisum (strain Tuc7)
GN=ribB PE=3 SV=1
Length = 215
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 6 GNSRYVKLTKEQTPVEDDIKPGELNQPIEVPQLNVHRCNECGQP 49
G S +LT +T + DD KP +LN+P V L H+ +P
Sbjct: 108 GVSAKDRLTTIKTAIADDAKPSDLNRPGHVFPLRAHKGGVLSRP 151
>sp|P57167|RIBB_BUCAI 3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Buchnera
aphidicola subsp. Acyrthosiphon pisum (strain APS)
GN=ribB PE=3 SV=1
Length = 215
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 6 GNSRYVKLTKEQTPVEDDIKPGELNQPIEVPQLNVHRCNECGQP 49
G S +LT +T + DD KP +LN+P V L H+ +P
Sbjct: 108 GVSAKDRLTTIKTAIADDAKPSDLNRPGHVFPLRAHKGGVLSRP 151
>sp|B8D8L7|RIBB_BUCA5 3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Buchnera
aphidicola subsp. Acyrthosiphon pisum (strain 5A)
GN=ribB PE=3 SV=1
Length = 215
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 6 GNSRYVKLTKEQTPVEDDIKPGELNQPIEVPQLNVHRCNECGQP 49
G S +LT +T + DD KP +LN+P V L H+ +P
Sbjct: 108 GVSAKDRLTTIKTAIADDAKPSDLNRPGHVFPLRAHKGGVLSRP 151
>sp|Q9SX24|PCR11_ARATH Protein PLANT CADMIUM RESISTANCE 11 OS=Arabidopsis thaliana
GN=PCR11 PE=3 SV=1
Length = 160
Score = 31.2 bits (69), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 62 WTTGIFGCTEDTESCWTGFFCPCVLFGRNVE 92
W+T + C D SC +CPCV FGR E
Sbjct: 19 WSTDLCECWMDINSCCLTCWCPCVAFGRIAE 49
>sp|Q5UNT4|YL670_MIMIV Putative serine/threonine-protein kinase L670 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_L670 PE=3 SV=1
Length = 539
Score = 30.8 bits (68), Expect = 5.1, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 138 GLFFAWWMC-GIYTGNLRQNLQK------KYHLKVINLLEFITLVSL 177
GL + ++C GIYT ++ NL+K K+ L N+L +I L+S+
Sbjct: 82 GLDYCEYICAGIYTADILSNLEKRILKVFKFGLHFKNILHYIKLISI 128
>sp|Q6DK99|CNFNB_XENLA Cornifelin homolog B OS=Xenopus laevis GN=cnfn-b PE=3 SV=1
Length = 111
Score = 30.0 bits (66), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 52 EDFEPPADEPWTTGIFGCTEDTESCWTGFFCPCVL 86
+ + W + +F C ED +C G F PC+L
Sbjct: 13 QGYMSSNSSQWNSDVFDCCEDMGTCLCGTFVPCIL 47
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.141 0.482
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,715,481
Number of Sequences: 539616
Number of extensions: 3177409
Number of successful extensions: 6052
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 6023
Number of HSP's gapped (non-prelim): 31
length of query: 178
length of database: 191,569,459
effective HSP length: 110
effective length of query: 68
effective length of database: 132,211,699
effective search space: 8990395532
effective search space used: 8990395532
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)