Your job contains 1 sequence.
>030392
MCSLQSQHFLNSPLLIFPKFNDNRKFHLNRTRNFGQRIGALSSVEEFLPNATRRKKDSLW
RGGFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRGEKLELQLLEIAQREETDEFIIGLPK
SWDGSETPQSNKVRSVAGRLAVRAAERSFSDILITAIFSFSCHFAIFFTVLNSTSVGI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030392
(178 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1009023117 - symbol:AT1G12244 species:3702 "Ar... 405 8.9e-38 1
UNIPROTKB|P0A8I1 - symbol:yqgF species:83333 "Escherichia... 101 1.8e-05 1
>TAIR|locus:1009023117 [details] [associations]
symbol:AT1G12244 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0016788 "hydrolase
activity, acting on ester bonds" evidence=IEA] InterPro:IPR005227
InterPro:IPR006641 InterPro:IPR012337 Pfam:PF03652 SMART:SM00732
EMBL:CP002684 GO:GO:0005737 GO:GO:0006281 GO:GO:0003676
GO:GO:0006310 GO:GO:0016788 SUPFAM:SSF53098 KO:K07447
Gene3D:3.30.420.140 HAMAP:MF_00651 TIGRFAMs:TIGR00250
IPI:IPI00657456 RefSeq:NP_001031028.1 UniGene:At.47869
ProteinModelPortal:F4IC62 SMR:F4IC62 EnsemblPlants:AT1G12244.1
GeneID:3766708 KEGG:ath:AT1G12244 OMA:SKSERQN PhylomeDB:F4IC62
Uniprot:F4IC62
Length = 254
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 91/155 (58%), Positives = 111/155 (71%)
Query: 1 MCSLQSQHFLNSPLLIF--PKFNDNRKFHLNRTRNFGQRI----GALSSVEEFLPNATRR 54
MCSL H +S + F K+ + H R G R A++S++E PNA RR
Sbjct: 18 MCSL---HSFSSVAISFRTQKYVNTSLVH--RLSPIGYRNYPLPWAVTSIDEIPPNAVRR 72
Query: 55 KKDSLWRGGFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRGEKLELQLLEIAQREETDEF 114
K D WRGGFSLGVDLGLSRTG+A+SKG+ V+PLTVLK RG+KLE +LLEIA+ EE DEF
Sbjct: 73 KIDRNWRGGFSLGVDLGLSRTGIAISKGYTVKPLTVLKSRGQKLETRLLEIAEEEEADEF 132
Query: 115 IIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERSF 149
IIGLP+S DG ET QSNK+RSVAGRLA++AAER +
Sbjct: 133 IIGLPRSSDGKETIQSNKIRSVAGRLAIQAAERGW 167
>UNIPROTKB|P0A8I1 [details] [associations]
symbol:yqgF species:83333 "Escherichia coli K-12"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016788 "hydrolase activity,
acting on ester bonds" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0090305 "nucleic acid phosphodiester
bond hydrolysis" evidence=IEA] [GO:0031564 "transcription
antitermination" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA;ISS] [GO:0006310 "DNA recombination"
evidence=IEA] InterPro:IPR005227 InterPro:IPR006641
InterPro:IPR012337 Pfam:PF03652 SMART:SM00732 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006281 GO:GO:0003676 EMBL:U28377
GO:GO:0006310 GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518
GO:GO:0031564 eggNOG:COG0816 KO:K07447 Gene3D:3.30.420.140
HAMAP:MF_00651 TIGRFAMs:TIGR00250 OMA:KNMNGTV ProtClustDB:PRK00109
HOGENOM:HOG000016954 PIR:D65080 RefSeq:NP_417424.1
RefSeq:YP_491148.1 PDB:1NMN PDB:1NU0 PDB:1OVQ PDBsum:1NMN
PDBsum:1NU0 PDBsum:1OVQ ProteinModelPortal:P0A8I1 SMR:P0A8I1
IntAct:P0A8I1 MINT:MINT-1317755 PRIDE:P0A8I1
EnsemblBacteria:EBESCT00000002163 EnsemblBacteria:EBESCT00000015039
GeneID:12930247 GeneID:947439 KEGG:ecj:Y75_p2879 KEGG:eco:b2949
PATRIC:32121308 EchoBASE:EB3075 EcoGene:EG13290
BioCyc:EcoCyc:G7525-MONOMER BioCyc:ECOL316407:JW2916-MONOMER
EvolutionaryTrace:P0A8I1 Genevestigator:P0A8I1 Uniprot:P0A8I1
Length = 138
Score = 101 (40.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + ++E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRL 140
+ DG+E P + + R A R+
Sbjct: 63 LNMDGTEQPLTARARKFANRI 83
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.138 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 178 178 0.00086 109 3 11 22 0.37 32
31 0.39 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 594 (63 KB)
Total size of DFA: 145 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.27u 0.11s 15.38t Elapsed: 00:00:01
Total cpu time: 15.27u 0.11s 15.38t Elapsed: 00:00:01
Start: Fri May 10 23:12:33 2013 End: Fri May 10 23:12:34 2013